RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NFATC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000101096

Ensembl transcript IDs: ENST00000371564.8, ENST00000396009.7, ENST00000414705.5, ENST00000496054.1, ENST00000609507.1, ENST00000609943.5, ENST00000610033.5

Found 1302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAACGTAATGCCCTAGCCTCGAGCCTAGGAGACCCAAGGTTAAGATaGGCTGGGTCACCGAGCACCTTGCCTCCGGGAAACAAGTTCGGG +
Preference number: 1 (lower is better)
Translates to: KRNALASSLGDPRLR*AGSPSTLPPGNKFG
Trigger: CCCGAACTTGTTTCCCGGAGGCAAGGTGCTCGGTGACCCAGCGCATCTTAACCTTGGGTCTCCTAGGCTCGAGGCTAGGGCATTACGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR CCA 90 bp GAGTGCCAAACACACCTGGCCCCACTCCCAGGAAGCTTTTACCTCTaGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTG +
Preference number: 1 (lower is better)
Translates to: ECQTHLAPLPGSFYL*VTLTGEPGLTKPTV
Trigger: CACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCCTGGGAGTGGGGCCAGGTGTGTTTGGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CCA 90 bp GGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTaGGGTTTAATCACAGTGCCCACATCTTCTGTCCCCCGTCCATCC +
Preference number: 1 (lower is better)
Translates to: GTGAVSVTWKNERKG*GLITVPTSSVPRPS
Trigger: GGATGGACGGGGGACAGAAGATGTGGGCACTGTGATTAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CCA 90 bp AAACCTAAGCCTGCCAGCACCACCATGTTGGAGAGACCTGTTTGTTaGAGAATTGGTTTTCTCTCCTCTGAGGGCTGTAGAGGCCAGAGG +
Preference number: 1 (lower is better)
Translates to: KPKPASTTMLERPVC*RIGFLSSEGCRGQR
Trigger: CCTCTGGCCTCTACAGCCCTCAGAGGAGAGAAAACCAATTCTCCAACAAACAGGTCTCTCCAACATGGTGGTGCTGGCAGGCTTAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR TCA 90 bp TCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTTGGTTGCTCTaGGAACTCCTTGCCTTCAAAAGGTACAGGAGCTGTATCTGTGAC +
Preference number: 1 (lower is better)
Translates to: SACKLGSWVTFLWLL*ELLAFKRYRSCICD
Trigger: GTCACAGATACAGCTCCTGTACCTTTTGAAGGCAAGGAGTTCTCAGAGCAACCAAAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR TCA 90 bp CCCAACAGCCATAGCCTCGGTCTGCTCAGGCCAATCAGAATGCTGTaGGCACCTGCTCTAATGGAAACAACATCATTTGCATCCATTCCA +
Preference number: 1 (lower is better)
Translates to: PNSHSLGLLRPIRML*APALMETTSFASIP
Trigger: TGGAATGGATGCAAATGATGTTGTTTCCATTAGAGCAGGTGCTCACAGCATTCTGATTGGCCTGAGCAGACCGAGGCTATGGCTGTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR CCA 90 bp GTTTCTGTCTCTATCGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTaGGCTCTTGGGTCACGTTCCTTTGGTTGCTCTGAGAACTCCTTG +
Preference number: 1 (lower is better)
Translates to: VSVSIEGFGFLQPVS*ALGSRSFGCSENSL
Trigger: CAAGGAGTTCTCAGAGCAACCAAAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCGATAGAGACAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CCA 90 bp AATCACACCCACAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTaGAAACAGTTGGGAGGAAGGAAATCACATATAACATGCAACCGA +
Preference number: 1 (lower is better)
Translates to: NHTHRGRLGETGCAQ*KQLGGRKSHITCNR
Trigger: TCGGTTGCATGTTATATGTGATTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTGTGGGTGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR GCA 90 bp TTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTTGGTTaGTCTGAGAACTCCTTGCCTTCAAAAGGTACAGGAGCTGTATCT +
Preference number: 1 (lower is better)
Translates to: FLQPVSWALGSRSFG*SENSLPSKGTGAVS
Trigger: AGATACAGCTCCTGTACCTTTTGAAGGCAAGGAGTTCTCAGAGCAACCAAAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CCA 90 bp AACAGTCAGGATTTTCTAAACCTAAGCCTGCCAGCACCACCATGTTaGAGAGACCTGTTTGTTGGAGAATTGGTTTTCTCTCCTCTGAGG +
Preference number: 1 (lower is better)
Translates to: NSQDFLNLSLPAPPC*RDLFVGELVFSPLR
Trigger: CCTCAGAGGAGAGAAAACCAATTCTCCAACAAACAGGTCTCTCCAACATGGTGGTGCTGGCAGGCTTAGGTTTAGAAAATCCTGACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR GCA 90 bp GTTCATTGTCAGGGAAAAATAAATGCTAGGTATCGACCGACAGGTTaGATACAAGTGCACAGGCCCGAATCTGAGCATTTTGCCTTCTAT +
Preference number: 1 (lower is better)
Translates to: VHCQGKINARYRPTG*IQVHRPESEHFAFY
Trigger: ATAGAAGGCAAAATGCTCAGATTCGGGCCTGTGCACTTGTATGCAACCTGTCGGTCGATACCTAGCATTTATTTTTCCCTGACAATGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR GCA 90 bp AAGCATTTAATTGGAATGCAGGAAAATACTTGCTATGCAATTGGCTaGTTTGGTTCCACGAAACGTAATGCCCTAGCCTCGAGCCTAGGA +
Preference number: 1 (lower is better)
Translates to: KHLIGMQENTCYAIG*FGSTKRNALASSLG
Trigger: TCCTAGGCTCGAGGCTAGGGCATTACGTTTCGTGGAACCAAAGCAGCCAATTGCATAGCAAGTATTTTCCTGCATTCCAATTAAATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR CCA 90 bp TTCTCAGGAGAGTTCCAGTGTCCTGTCTCATGTAGAATGTGCTTTTaGTCAGCAGGTGCTTACTATTTGGACGGAACACCATTAAGATCA +
Preference number: 1 (lower is better)
Translates to: FSGEFQCPVSCRMCF*SAGAYYLDGTPLRS
Trigger: TGATCTTAATGGTGTTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAGCACATTCTACATGAGACAGGACACTGGAACTCTCCTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR TCA 90 bp GGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTACGTCTaGTTTCTGGCAGGAGGTCCTGAAAACTCCTTCCTGATAATTTCA +
Preference number: 1 (lower is better)
Translates to: GQIQKVSCYNGFFYV*FLAGGPENSFLIIS
Trigger: TGAAATTATCAGGAAGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
3UTR CCA 90 bp TCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTGCAAACTTTaGAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGC +
Preference number: 1 (lower is better)
Translates to: SSSSIFVQYRKTCKL*KYTTFSNTVDLSEC
Trigger: GCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR GCA 90 bp AATCAGAATGCTGTGAGCACCTGCTCTAATGGAAACAACATCATTTaGATCCATTCCATTCAAAGCTTGAACTCAGCAGGGAGTTTATTC +
Preference number: 1 (lower is better)
Translates to: NQNAVSTCSNGNNII*IHSIQSLNSAGSLF
Trigger: GAATAAACTCCCTGCTGAGTTCAAGCTTTGAATGGAATGGATGCAAATGATGTTGTTTCCATTAGAGCAGGTGCTCACAGCATTCTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR TCA 90 bp AACGCGTATACATGTCATAACTTAACGCCAAGAAGTCTTAACAGGTaGTCTTGTCTGGGCAAGACAGTTTGGTTTTGGAATGAGAATTCA +
Preference number: 1 (lower is better)
Translates to: NAYTCHNLTPRSLNR*SCLGKTVWFWNENS
Trigger: TGAATTCTCATTCCAAAACCAAACTGTCTTGCCCAGACAAGATCACCTGTTAAGACTTCTTGGCGTTAAGTTATGACATGTATACGCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR TCA 90 bp CATGAGCCATCCTTCTTGGCAAAATTTCCTCCTAGCATTTGTAACTaGCAAAACTTCCTTGATAGCTGTCAGTTCCTAATACACTTTCTC +
Preference number: 1 (lower is better)
Translates to: HEPSFLAKFPPSICN*QNFLDSCQFLIHFL
Trigger: GAGAAAGTGTATTAGGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATTTTGCCAAGAAGGATGGCTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CCA 90 bp TATTGCCTCTTCCCGTACTGGAAATATTTCATGAGCCATCCTTCTTaGCAAAATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTG +
Preference number: 1 (lower is better)
Translates to: YCLFPYWKYFMSHPS*QNFLLAFVTDKTSL
Trigger: CAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATTTTGCCAAGAAGGATGGCTCATGAAATATTTCCAGTACGGGAAGAGGCAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CCA 90 bp CTACTTTCTCATTCTCTTAGAGGATCTTATTGCCTCTTCCCGTACTaGAAATATTTCATGAGCCATCCTTCTTGGCAAAATTTCCTCCTA +
Preference number: 1 (lower is better)
Translates to: LLSHSLRGSYCLFPY*KYFMSHPSWQNFLL
Trigger: TAGGAGGAAATTTTGCCAAGAAGGATGGCTCATGAAATATTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAGAGAATGAGAAAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CCA 90 bp CCCAGTTCTTTGAAGGAATCAATTCATCCTTGGTTATATCTATGCTaGAAAACTGTGGGTGTCCTTTGGATAAAGCATACAGGAGTTATC +
Preference number: 1 (lower is better)
Translates to: PSSLKESIHPWLYLC*KTVGVLWIKHTGVI
Trigger: GATAACTCCTGTATGCTTTATCCAAAGGACACCCACAGTTTTCCAGCATAGATATAACCAAGGATGAATTGATTCCTTCAAAGAACTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR CCA 90 bp TTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTaGGATTTAAAACATAAACCGAAAAGAAGAGTTCTCTCTGGTGTT +
Preference number: 1 (lower is better)
Translates to: LLFGRNTIKINQDAL*DLKHKPKRRVLSGV
Trigger: AACACCAGAGAGAACTCTTCTTTTCGGTTTATGTTTTAAATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR GCA 90 bp TACATATTATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTaGAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTG +
Preference number: 1 (lower is better)
Translates to: YILSSSSIFVQYRKT*KLWKYTTFSNTVDL
Trigger: CAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGATAATATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp CCTAGCCTCGAGCCTAGGAGACCCAAGGTTAAGATGCGCTGGGTCACCGAGCACGCCTCTGCCCAAGACTaGCTCACTGAGGCGTCTTGG +
Preference number: 2 (lower is better)
Translates to: PSLEPRRPKVKMRWVTEHASAQD*LTEASW
Trigger: CCAAGACGCCTCAGTGAGCCAGTCTTGGGCAGAGGC...GTGCTCGGTGACCCAGCGCATCTTAACCTTGGGTCTCCTAGGCTCGAGGCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGGAAGGTGAGGGGCTGTaGAGGGCTCCGAGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMEGEGL*RAPRGQ
Trigger: CTGACCCCTCGGAGCCCTCCACAGCCCCTCACCTTC...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
3UTR CAA 90 bp ACACACCTGGCCCCACTCCCAGGAAGCTTTTACCTCTGGGTAACCTaGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGGGCACTGAG +
Preference number: 2 (lower is better)
Translates to: THLAPLPGSFYLWVT*TGEPGLTKPTVGTE
Trigger: CTCAGTGCCCACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCCTGGGAGTGGGGCCAGGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp ACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGCAACATTGATCCGCGTGTaGACTCCGGGCTGGGAGATG +
Preference number: 2 (lower is better)
Translates to: TARQDSSRARCPGQPFKATLIRV*TPGWEM
Trigger: CATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT...TGCTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp TGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGGGCACTGAGCTAGGGGAGACTGGGTaGGCTCAGTGGAAACAGTTG +
Preference number: 2 (lower is better)
Translates to: WVTLTGEPGLTKPTVGTELGETG*AQWKQL
Trigger: CAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAG...CTCAGTGCCCACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp CACACCCACAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGCTTCAGCCTGTAAGCTaGGCTCTTGGGTCACGTTCC +
Preference number: 2 (lower is better)
Translates to: HTHRGRLGETGCAQWKQLLQPVS*ALGSRS
Trigger: GGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAG...CAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTGTGGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp CAAGATGTCCAGGATGCTAAGCTTGTCCCAACAGCCATAGCCTCGGTCTGCTCAGGCCCAGTTGTGGCATaGACTGGGCGAGCTCTAAGG +
Preference number: 2 (lower is better)
Translates to: QDVQDAKLVPTAIASVCSGPVVA*TGRALR
Trigger: CCTTAGAGCTCGCCCAGTCCATGCCACAACTGGGCC...TGAGCAGACCGAGGCTATGGCTGTTGGGACAAGCTTAGCATCCTGGACATCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR CAA 90 bp GAGGTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATaGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGA +
Preference number: 2 (lower is better)
Translates to: EVASSLSESPLSAHT*IRVWTPGWEMNMKG
Trigger: TCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
3UTR CAA 90 bp GACCGACAGGTTGCATACAAGTGCACAGGCCCGAATCTGAGCATTTaGCCTTCTATCTGGAGTGCCAAACACACCTGGCCCCACTCCCAG +
Preference number: 2 (lower is better)
Translates to: DRQVAYKCTGPNLSI*PSIWSAKHTWPHSQ
Trigger: CTGGGAGTGGGGCCAGGTGTGTTTGGCACTCCAGATAGAAGGCAAAATGCTCAGATTCGGGCCTGTGCACTTGTATGCAACCTGTCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp CAAGATGTCCAGGATGCTAAGCTTGTCCCAACAGCCATAGCCTCGGTCTGCTCACCAAGACTGGCTCACTaGGGCGTCTTGGCTACTGGA +
Preference number: 2 (lower is better)
Translates to: QDVQDAKLVPTAIASVCSPRLAH*GVLATG
Trigger: TCCAGTAGCCAAGACGCCTCAGTGAGCCAGTCTTGG...TGAGCAGACCGAGGCTATGGCTGTTGGGACAAGCTTAGCATCCTGGACATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR GCA 90 bp CCTAGCCTCGAGCCTAGGAGACCCAAGGTTAAGATGCGCTGGGTCACCGAGCACTCTTCTGAGGCCTTCTaGCTACAGACTGTACAGACT +
Preference number: 2 (lower is better)
Translates to: PSLEPRRPKVKMRWVTEHSSEAF*LQTVQT
Trigger: AGTCTGTACAGTCTGTAGGCAGAAGGCCTCAGAAGA...GTGCTCGGTGACCCAGCGCATCTTAACCTTGGGTCTCCTAGGCTCGAGGCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR CAA 90 bp AGCCTGCCAGCACCACCATGTTGGAGAGACCTGTTTGTTGGAGAATaGGTTTTCTCTCCTCTGAGGGCTGTAGAGGCCAGAGGGGTGAGT +
Preference number: 2 (lower is better)
Translates to: SLPAPPCWRDLFVGE*VFSPLRAVEARGVS
Trigger: ACTCACCCCTCTGGCCTCTACAGCCCTCAGAGGAGAGAAAACCAATTCTCCAACAAACAGGTCTCTCCAACATGGTGGTGCTGGCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR GCA 90 bp CCTAGCCTCGAGCCTAGGAGACCCAAGGTTAAGATGCGCTGGGTCACCGAGCACCTTTTGGTCAGCAGGTaGTTACTATTTGGACGGAAC +
Preference number: 2 (lower is better)
Translates to: PSLEPRRPKVKMRWVTEHLLVSR*LLFGRN
Trigger: GTTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAG...GTGCTCGGTGACCCAGCGCATCTTAACCTTGGGTCTCCTAGGCTCGAGGCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CCA 90 bp ACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGCATGTAAGCTGGGCTCTTaGGTCACGTTCCTTTGGTTG +
Preference number: 2 (lower is better)
Translates to: TARQDSSRARCPGQPFKACKLGS*VTFLWL
Trigger: CAACCAAAGGAACGTGACCCAAGAGCCCAGCTTACA...TGCTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp TGCTTTGGTTCCACGAAACGTAATGCCCTAGCCTCGAGCCTAGGAGACCCAAGGAAGACTAGGGGAGACTaGGTGCGCTCAGTGGAAACA +
Preference number: 2 (lower is better)
Translates to: CFGSTKRNALASSLGDPRKTRGD*VRSVET
Trigger: TGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTT...CCTTGGGTCTCCTAGGCTCGAGGCTAGGGCATTACGTTTCGTGGAACCAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR CAA 90 bp TACGGAAAAGCACTCTGGCTGCTAGGAAGAAAGCAAGCCGGAACCTaGCAAAGCATCCAGGTTGTACAGCTGCAGCAGACAGGTGCTTGC +
Preference number: 2 (lower is better)
Translates to: YGKALWLLGRKQAGT*QSIQVVQLQQTGAC
Trigger: GCAAGCACCTGTCTGCTGCAGCTGTACAACCTGGATGCTTTGCAAGGTTCCGGCTTGCTTTCTTCCTAGCAGCCAGAGTGCTTTTCCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGGGCTTCTTTTACGTCTaGTTTCTGGCAGGAGGTCCT +
Preference number: 2 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMGFFYV*FLAGGP
Trigger: AGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCC...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
3UTR-3UTR TCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGGGCTTCTTTTACGTCTaGTTTCTGGCAGGAGGTCCT +
Preference number: 2 (lower is better)
Translates to: VASSLSESPLSAHTLIRVGFFYV*FLAGGP
Trigger: AGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCC...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
3UTR-3UTR TCA 90 bp GCATCCAGGTTGTACAGCTGCAGCAGACAGGTGCTTGCTCTCTGCAGCCTGGGTAGAAGTCTTAACAGGTaGTCTTGTCTGGGCAAGACA +
Preference number: 2 (lower is better)
Translates to: ASRLYSCSRQVLALCSLGRSLNR*SCLGKT
Trigger: TGTCTTGCCCAGACAAGATCACCTGTTAAGACTTCT...ACCCAGGCTGCAGAGAGCAAGCACCTGTCTGCTGCAGCTGTACAACCTGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTGAAGGTGAGGGGCTGTaGAGGGCTCCGAGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGIEGEGL*RAPRGQ
Trigger: CTGACCCCTCGGAGCCCTCCACAGCCCCTCACCTTC...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp ATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCACATTGATCCGCGTGTaGACTCCGGGCTGGGAGATG +
Preference number: 2 (lower is better)
Translates to: IQPFSSILVETHLQKHLGTLIRV*TPGWEM
Trigger: CATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT...GCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp TGCTTTGGTTCCACGAAACGTAATGCCCTAGCCTCGAGCCTAGGAGACCCAAGGGCTGTATCTGTGACCTaGAAAAACGAACGCAAGGGC +
Preference number: 2 (lower is better)
Translates to: CFGSTKRNALASSLGDPRAVSVT*KNERKG
Trigger: GCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGC...CCTTGGGTCTCCTAGGCTCGAGGCTAGGGCATTACGTTTCGTGGAACCAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR GCA 90 bp TGCTTTGGTTCCACGAAACGTAATGCCCTAGCCTCGAGCCTAGGAGACCCAAGGTCACGTTCCTTTGGTTaGTCTGAGAACTCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: CFGSTKRNALASSLGDPRSRSFG*SENSLP
Trigger: AGGCAAGGAGTTCTCAGAGCAACCAAAGGAACGTGA...CCTTGGGTCTCCTAGGCTCGAGGCTAGGGCATTACGTTTCGTGGAACCAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CCA 90 bp AGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTAATCACAGTACATTGATCCGCGTGTaGACTCCGGGCTGGGAGATG +
Preference number: 2 (lower is better)
Translates to: SCICDLEKRTQGLGFNHSTLIRV*TPGWEM
Trigger: CATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT...ACTGTGATTAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp CACACCCACAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGTTAAATGCACATGCTTaGGATTCTCCACCGCTTTAC +
Preference number: 2 (lower is better)
Translates to: HTHRGRLGETGCAQWKQLLNAHA*DSPPLY
Trigger: GTAAAGCGGTGGAGAATCTCAAGCATGTGCATTTAA...CAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTGTGGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp AGGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAATCCCCCGCTTGTCCTaGGGTATCTGCAGTACATGC +
Preference number: 2 (lower is better)
Translates to: RSSENKSLTTHSWLFPSEIPRLS*GICSTC
Trigger: GCATGTACTGCAGATACCCCAGGACAAGCGGGGGAT...TTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTTACAAAGCCCACAGTaGGCACTGAGTGGCCATGAC +
Preference number: 2 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKLQSPQ*ALSGHD
Trigger: GTCATGGCCACTCAGTGCCCACTGTGGGCTTTGTAA...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CAA 90 bp AGCTGGGCTCTTGGGTCACGTTCCTTTGGTTGCTCTGAGAACTCCTaGCCTTCAAAAGGTACAGGAGCTGTATCTGTGACCTGGAAAAAC +
Preference number: 2 (lower is better)
Translates to: SWALGSRSFGCSENS*PSKGTGAVSVTWKN
Trigger: GTTTTTCCAGGTCACAGATACAGCTCCTGTACCTTTTGAAGGCAAGGAGTTCTCAGAGCAACCAAAGGAACGTGACCCAAGAGCCCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CAA 90 bp CACAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTaGGGAGGAAGGAAATCACATATAACATGCAACCGAATAGAGCTC +
Preference number: 2 (lower is better)
Translates to: HRGRLGETGCAQWKQ*GGRKSHITCNRIEL
Trigger: GAGCTCTATTCGGTTGCATGTTATATGTGATTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp AATGAATCCCCCGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAATTAGTGCCCATACATTaGTCCGCGTGTGGACTCCGG +
Preference number: 2 (lower is better)
Translates to: NESPACPGVSAVHANRNKLVPIH*SACGLR
Trigger: CCGGAGTCCACACGCGGATCAATGTATGGGCACTAA...TTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCGGGGGATTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp GAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGAGATGACGCGTACAGGAGGTTaGGCTACCAGGAGGCCGTTT +
Preference number: 2 (lower is better)
Translates to: EQEKGDSFFHKAIPSPEMTRTGG*ATRRPF
Trigger: AAACGGCCTCCTGGTAGCTCAACCTCCTGTACGCGT...CATCTCAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR TCA 90 bp TGCTTTGGTTCCACGAAACGTAATGCCCTAGCCTCGAGCCTAGGAGACCCAAGGAAACCTTCACTCAACTaGGATCCTTCTAACACACGT +
Preference number: 2 (lower is better)
Translates to: CFGSTKRNALASSLGDPRKPSLN*DPSNTR
Trigger: ACGTGTGTTAGAAGGATCTCAGTTGAGTGAAGGTTT...CCTTGGGTCTCCTAGGCTCGAGGCTAGGGCATTACGTTTCGTGGAACCAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR GCA 90 bp AGGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAAGCTCCAGGGCTAGGTaGCCTGGTCAGCCTTTTAAA +
Preference number: 2 (lower is better)
Translates to: RSSENKSLTTHSWLFPSESSRAR*PGQPFK
Trigger: TTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCT...TTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp CAAGATGTCCAGGATGCTAAGCTTGTCCCAACAGCCATAGCCTCGGTCTGCTCAGAAGCTGAGCTACTTTaGTACAATAGCAGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: QDVQDAKLVPTAIASVCSEAELL*YNSRKA
Trigger: TGCCTTCCTGCTATTGTAGCAAAGTAGCTCAGCTTC...TGAGCAGACCGAGGCTATGGCTGTTGGGACAAGCTTAGCATCCTGGACATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CCA 90 bp ATTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGCTGTGGCCCAGTTGTaGCATGGACTGGGCGAGCTC +
Preference number: 2 (lower is better)
Translates to: ILEQEKGDSFFHKAIPSPAVAQL*HGLGEL
Trigger: GAGCTCGCCCAGTCCATGCCACAACTGGGCCACAGC...AGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CCA 90 bp GAACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGCTGGGCAAGACAGTTTaGTTTTGGAATGAGAATTCA +
Preference number: 2 (lower is better)
Translates to: EQLAKTAPGLGALVSLLKLGKTV*FWNENS
Trigger: TGAATTCTCATTCCAAAACCAAACTGTCTTGCCCAG...CTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp TTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGTTCCTTTGGTTGCTCTaGGAACTCCTTGCCTTCAAA +
Preference number: 2 (lower is better)
Translates to: FYLWVTLTGEPGLTKPTVFLWLL*ELLAFK
Trigger: TTTGAAGGCAAGGAGTTCTCAGAGCAACCAAAGGAA...CACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp TTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGAGAAGTCTTAACAGGTaGTCTTGTCTGGGCAAGACA +
Preference number: 2 (lower is better)
Translates to: FYLWVTLTGEPGLTKPTVRSLNR*SCLGKT
Trigger: TGTCTTGCCCAGACAAGATCACCTGTTAAGACTTCT...CACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp CTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGAGAAATCCAGGTTGTACAGCTaGAGCAGACAGGTGCTTGCT +
Preference number: 2 (lower is better)
Translates to: LTTHSWLFPSEVNIAGEKSRLYS*SRQVLA
Trigger: AGCAAGCACCTGTCTGCTGCAGCTGTACAACCTGGA...TTTCTCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp AATGAATCCCCCGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAAGTGTGGACTCCGGGCTaGGAGATGAACATGAAAGGA +
Preference number: 2 (lower is better)
Translates to: NESPACPGVSAVHANRNKVWTPG*EMNMKG
Trigger: TCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACAC...TTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCGGGGGATTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp ATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCAAGAAGAGTTCTCTCTaGTGTTTAGAGGGAGGTGGC +
Preference number: 2 (lower is better)
Translates to: IQPFSSILVETHLQKHLGKKSSL*CLEGGG
Trigger: GCCACCTCCCTCTAAACACCAGAGAGAACTCTTCTT...GCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGACTTCAGCCTGTAAGCTaGGCTCTTGGGTCACGTTCC +
Preference number: 2 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGLQPVS*ALGSRS
Trigger: GGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAG...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGGGCACTGAGTGGCCATaGCTTTCTTCTGAGGCCTTC +
Preference number: 2 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLGTEWP*LSSEAF
Trigger: GAAGGCCTCAGAAGAAAGTCATGGCCACTCAGTGCC...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR GCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGATACAGAAGGTGTCTTaGTATAATGGCTTCTTTTAC +
Preference number: 2 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVIQKVS*YNGFFY
Trigger: GTAAAAGAAGCCATTATAGCAAGACACCTTCTGTAT...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
3UTR-3UTR GCA 90 bp GAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGAGATGTCCAGGTTGTACAGCTaGAGCAGACAGGTGCTTGCT +
Preference number: 2 (lower is better)
Translates to: EQEKGDSFFHKAIPSPEMSRLYS*SRQVLA
Trigger: AGCAAGCACCTGTCTGCTGCAGCTGTACAACCTGGA...CATCTCAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR GCA 90 bp GGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAAAACTTCTTTTCTTGGTTaGTTTAGCCCTTCTGCTATT +
Preference number: 2 (lower is better)
Translates to: GRLGETGCAQWKQLGGRKTSFLG*FSPSAI
Trigger: AATAGCAGAAGGGCTAAAGCAACCAAGAAAAGAAGT...TTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGACAGGTTGCATACAAGTaGACAGGCCCGAATCTGAGC +
Preference number: 2 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGQVAYK*TGPNLS
Trigger: GCTCAGATTCGGGCCTGTGCACTTGTATGCAACCTG...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp GAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGAGATGTATCGACCGACAGGTTaGATACAAGTGCACAGGCCC +
Preference number: 2 (lower is better)
Translates to: EQEKGDSFFHKAIPSPEMYRPTG*IQVHRP
Trigger: GGGCCTGTGCACTTGTATGCAACCTGTCGGTCGATA...CATCTCAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CCA 90 bp GGAAGCTTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCAACCAGGATGCTCTCTaGGATTTAAAACATAAACCG +
Preference number: 2 (lower is better)
Translates to: GSFYLWVTLTGEPGLTKPNQDAL*DLKHKP
Trigger: CGGTTTATGTTTTAAATCCCAGAGAGCATCCTGGTT...GGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp TACTTTCTCATTCTCTTAGAGGATCTTATTGCCTCTTCCCGTACTGGAAATATTGCTGTGGCCCAGTTGTaGCATGGACTGGGCGAGCTC +
Preference number: 2 (lower is better)
Translates to: YFLILLEDLIASSRTGNIAVAQL*HGLGEL
Trigger: GAGCTCGCCCAGTCCATGCCACAACTGGGCCACAGC...AATATTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAGAGAATGAGAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGATCCCCCGCTTGTCCTaGGGTATCTGCAGTACATGC +
Preference number: 2 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLIPRLS*GICSTC
Trigger: GCATGTACTGCAGATACCCCAGGACAAGCGGGGGAT...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CCA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGATTTTGCCTTCTATCTaGAGTGCCAAACACACCTGG +
Preference number: 2 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKILPSI*SAKHTW
Trigger: CCAGGTGTGTTTGGCACTCCAGATAGAAGGCAAAAT...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGATACAGAAGGTGTCTTaGTATAATGGCTTCTTTTAC +
Preference number: 2 (lower is better)
Translates to: VASSLSESPLSAHTLIRVIQKVS*YNGFFY
Trigger: GTAAAAGAAGCCATTATAGCAAGACACCTTCTGTAT...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
3UTR-3UTR GCA 90 bp CGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAGTCTCATGTAGAATGTaGTTTTGGTCAGCAGGTGCT +
Preference number: 2 (lower is better)
Translates to: RLSWGICSTCKQKQTHLPVSCRM*FWSAGA
Trigger: AGCACCTGCTGACCAAAAGCACATTCTACATGAGAC...TGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp AATGAATCCCCCGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAAGCTCTGAGAACTCCTTaGCTTCAAAAGGTACAGGAG +
Preference number: 2 (lower is better)
Translates to: NESPACPGVSAVHANRNKALRTP*LQKVQE
Trigger: CTCCTGTACCTTTTGAAGGCAAGGAGTTCTCAGAGC...TTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCGGGGGATTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp GCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCTGTTTTTTACGTCTGATTTCTaGCAGGAGGTCCTGAAAACT +
Preference number: 2 (lower is better)
Translates to: ALFLYLGRNPPPEALGLFFTSDF*QEVLKT
Trigger: AGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAA...AAACAGCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371564.8
3UTR-3UTR CCA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGACAGGTGATCTTGTCTaGGCAAGACAGTTTGGTTTT +
Preference number: 2 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKTGDLV*ARQFGF
Trigger: AAAACCAAACTGTCTTGCCCAGACAAGATCACCTGT...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CAA 90 bp CCTGTCTCATGTAGAATGTGCTTTTGGTCAGCAGGTGCTTACTATTaGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATT +
Preference number: 2 (lower is better)
Translates to: PVSCRMCFWSAGAYY*DGTPLRSTRMLSGI
Trigger: AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAGCACATTCTACATGAGACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACAGCCCACAGTGGGCACTaGGTGGCCATGACTTTCTTC +
Preference number: 2 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTAHSGH*VAMTFF
Trigger: GAAGAAAGTCATGGCCACTCAGTGCCCACTGTGGGC...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp TGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAAGAAGCTCTGAGAACTCCTTaGCTTCAAAAGGTACAGGAG +
Preference number: 2 (lower is better)
Translates to: CPGVSAVHANRNKHICQEALRTP*LQKVQE
Trigger: CTCCTGTACCTTTTGAAGGCAAGGAGTTCTCAGAGC...TTCTTGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCAGCTCCAGGGCTAGGTaGCCTGGTCAGCCTTTTAAA +
Preference number: 2 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVSSRAR*PGQPFK
Trigger: TTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCT...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp ATTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTCAGGTTGCATACAAGTaGACAGGCCCGAATCTGAGC +
Preference number: 2 (lower is better)
Translates to: ILEQEKGDSFFHKAIPSPQVAYK*TGPNLS
Trigger: GCTCAGATTCGGGCCTGTGCACTTGTATGCAACCTG...AGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR GCA 90 bp ATTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTTATCGACCGACAGGTTaGATACAAGTGCACAGGCCC +
Preference number: 2 (lower is better)
Translates to: ILEQEKGDSFFHKAIPSPYRPTG*IQVHRP
Trigger: GGGCCTGTGCACTTGTATGCAACCTGTCGGTCGATA...AGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CCA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTGTAGAATGTGCTTTTaGTCAGCAGGTGCTTACTAT +
Preference number: 2 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKCRMCF*SAGAYY
Trigger: ATAGTAAGCACCTGCTGACCAAAAGCACATTCTACA...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACATTAGTGCCCATACATTaGTCCGCGTGTGGACTCCGG +
Preference number: 2 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTLVPIH*SACGLR
Trigger: CCGGAGTCCACACGCGGATCAATGTATGGGCACTAA...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp GTGCGGATAGGTCTTCAGGGGCAGAAGGGATCTTTAAATAGGTTCAGGTCAAATTTAAATGCACATGCTTaGGATTCTCCACCGCTTTAC +
Preference number: 2 (lower is better)
Translates to: VRIGLQGQKGSLNRFRSNLNAHA*DSPPLY
Trigger: GTAAAGCGGTGGAGAATCTCAAGCATGTGCATTTAA...ATTTGACCTGAACCTATTTAAAGATCCCTTCTGCCCCTGAAGACCTATCCGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCGCACAGGCCCGAATCTaGGCATTTTGCCTTCTATCT +
Preference number: 2 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVAQARI*AFCLLS
Trigger: AGATAGAAGGCAAAATGCTCAGATTCGGGCCTGTGC...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGGCTCTGAGAACTCCTTaGCTTCAAAAGGTACAGGAG +
Preference number: 2 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLALRTP*LQKVQE
Trigger: CTCCTGTACCTTTTGAAGGCAAGGAGTTCTCAGAGC...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR GCA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACAGCCTTCTATCTGGAGTaGCAAACACACCTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTAFYLE*QTHLAP
Trigger: TGGGGCCAGGTGTGTTTGGCACTCCAGATAGAAGGC...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp AGAGGGAATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCATGTAGAATGTGCTTTTaGTCAGCAGGTGCTTACTAT +
Preference number: 2 (lower is better)
Translates to: RGNSALFLYLGRNPPPEACRMCF*SAGAYY
Trigger: ATAGTAAGCACCTGCTGACCAAAAGCACATTCTACA...TGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAATTCCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp CGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCATGTAGAATGTGCTTTTaGTCAGCAGGTGCTTACTAT +
Preference number: 2 (lower is better)
Translates to: RLSWGICSTCKQKQTHLPCRMCF*SAGAYY
Trigger: ATAGTAAGCACCTGCTGACCAAAAGCACATTCTACA...TGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGACTCTATCGAGGGTTTTaGGTTTCTTCAGCCTGTAAG +
Preference number: 2 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGLYRGF*VSSACK
Trigger: CTTACAGGCTGAAGAAACCCAAAACCCTCGATAGAG...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCCTCACCACACACTCTTaGCTTTTCCCCAGTGAAGTC +
Preference number: 2 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVLTTHS*LFPSEV
Trigger: GACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp GTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTAAATGCACATGCTTaGGATTCTCCACCGCTTTAC +
Preference number: 2 (lower is better)
Translates to: VRTNHSPHTLGFSPVKSILNAHA*DSPPLY
Trigger: GTAAAGCGGTGGAGAATCTCAAGCATGTGCATTTAA...TATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp GAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGAGATGCTTCATGTTAGAATTTaGGTGCGGATAGGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: EQEKGDSFFHKAIPSPEMLHVRI*VRIGLQ
Trigger: CTGAAGACCTATCCGCACTCAAATTCTAACATGAAG...CATCTCAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR TCA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAAAACAACTGAATGGCTaGAAAATGAATCCCCCGCTT +
Preference number: 2 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGKQLNG*KMNPPL
Trigger: AAGCGGGGGATTCATTTTTCAGCCATTCAGTTGTTT...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp ACAATACAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGCTCCAGGGCTAGGTaGCCTGGTCAGCCTTTTAAA +
Preference number: 2 (lower is better)
Translates to: TIQEDLQTLEIYYIQQHGSSRAR*PGQPFK
Trigger: TTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCT...ACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp AGGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAAGAAACAAACACATCTaGCAAGAACTTCAAGGGTTT +
Preference number: 2 (lower is better)
Translates to: RSSENKSLTTHSWLFPSERNKHI*QELQGF
Trigger: AAACCCTTGAAGTTCTTGGCAGATGTGTTTGTTTCT...TTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp CATATTTACATTAACTTAGATGTAGCAGTGCAAACCTTCACTCAACTGAGATCCGTGTGGACTCCGGGCTaGGAGATGAACATGAAAGGA +
Preference number: 2 (lower is better)
Translates to: HIYINLDVAVQTFTQLRSVWTPG*EMNMKG
Trigger: TCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACAC...GGATCTCAGTTGAGTGAAGGTTTGCACTGCTACATCTAAGTTAATGTAAATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp GCTATACATATTATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTGCAAAACGAACGCAAGGGCTaGGGTTTAATCACAGTGCCC +
Preference number: 2 (lower is better)
Translates to: AIHIIKQQHLCTIQEDLQNERKG*GLITVP
Trigger: GGGCACTGTGATTAAACCCCAGCCCTTGCGTTCGTT...TTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGATAATATGTATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp ACAATACAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAACGAACGCAAGGGCTaGGGTTTAATCACAGTGCCC +
Preference number: 2 (lower is better)
Translates to: TIQEDLQTLEIYYIQQHGNERKG*GLITVP
Trigger: GGGCACTGTGATTAAACCCCAGCCCTTGCGTTCGTT...ACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp GAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACGCTGTATCTGTGACCTaGAAAAACGAACGCAAGGGC +
Preference number: 2 (lower is better)
Translates to: EIYYIQQHGRPVRVLHIYAVSVT*KNERKG
Trigger: GCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGC...GTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp TACTTTCTCATTCTCTTAGAGGATCTTATTGCCTCTTCCCGTACTGGAAATATTAAGACTAGGGGAGACTaGGTGCGCTCAGTGGAAACA +
Preference number: 2 (lower is better)
Translates to: YFLILLEDLIASSRTGNIKTRGD*VRSVET
Trigger: TGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTT...AATATTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAGAGAATGAGAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp GAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACGGTCAAATTAACCAGTaGAGCTGGGAAGCACATCCT +
Preference number: 2 (lower is better)
Translates to: EIYYIQQHGRPVRVLHIYGQINQ*SWEAHP
Trigger: AGGATGTGCTTCCCAGCTTCACTGGTTAATTTGACC...GTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp CTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGAGAAAACTTCTTTTCTTGGTTaGTTTAGCCCTTCTGCTATT +
Preference number: 2 (lower is better)
Translates to: LTTHSWLFPSEVNIAGEKTSFLG*FSPSAI
Trigger: AATAGCAGAAGGGCTAAAGCAACCAAGAAAAGAAGT...TTTCTCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGCTTAGAGGATCTTATTaGCTCTTCCCGTACTGGAAA +
Preference number: 2 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLLRGSY*LFPYWK
Trigger: TTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAG...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CCA 90 bp TGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAAGAAACCTCCAGAAGCACTTaGGCTGTTTTACTTAACAAA +
Preference number: 2 (lower is better)
Translates to: CPGVSAVHANRNKHICQETSRST*AVLLNK
Trigger: TTTGTTAAGTAAAACAGCCCAAGTGCTTCTGGAGGT...TTCTTGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp GCTATACATATTATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTGCAATCTTTGAGCTTAGGGTaGGTGAGGGAAAGGTCGTTC +
Preference number: 2 (lower is better)
Translates to: AIHIIKQQHLCTIQEDLQSLSLG*VRERSF
Trigger: GAACGACCTTTCCCTCACCCACCCTAAGCTCAAAGA...TTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGATAATATGTATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CAA 90 bp ATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTGCAAACTTaGGAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTG +
Preference number: 2 (lower is better)
Translates to: IKQQHLCTIQEDLQT*EIYYIQQHGRPVRV
Trigger: CACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp TACTTTCTCATTCTCTTAGAGGATCTTATTGCCTCTTCCCGTACTGGAAATATTGGTCAAATTAACCAGTaGAGCTGGGAAGCACATCCT +
Preference number: 2 (lower is better)
Translates to: YFLILLEDLIASSRTGNIGQINQ*SWEAHP
Trigger: AGGATGTGCTTCCCAGCTTCACTGGTTAATTTGACC...AATATTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAGAGAATGAGAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCTTGGCTTTTCCCCAGTaGAGTCAATATTGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSLAFPQ*SQYCWR
Trigger: TCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAA...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp CATATTTACATTAACTTAGATGTAGCAGTGCAAACCTTCACTCAACTGAGATCCTCACGTTCCTTTGGTTaGTCTGAGAACTCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: HIYINLDVAVQTFTQLRSSRSFG*SENSLP
Trigger: AGGCAAGGAGTTCTCAGAGCAACCAAAGGAACGTGA...GGATCTCAGTTGAGTGAAGGTTTGCACTGCTACATCTAAGTTAATGTAAATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp ACAATACAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAAGAAGAGTTCTCTCTaGTGTTTAGAGGGAGGTGGC +
Preference number: 2 (lower is better)
Translates to: TIQEDLQTLEIYYIQQHGKKSSL*CLEGGG
Trigger: GCCACCTCCCTCTAAACACCAGAGAGAACTCTTCTT...ACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGAACCAGGATGCTCTCTaGGATTTAAAACATAAACCG +
Preference number: 2 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLNQDAL*DLKHKP
Trigger: CGGTTTATGTTTTAAATCCCAGAGAGCATCCTGGTT...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CCA 90 bp CAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGAGGAAACAACTGAATaGCTGAAAAATGAATCCCCC +
Preference number: 2 (lower is better)
Translates to: QEDLQTLEIYYIQQHGRPEETTE*LKNESP
Trigger: GGGGGATTCATTTTTCAGCCATTCAGTTGTTTCCTC...AGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCATGAGCCATCCTTCTTaGCAAAATTTCCTCCTAGCA +
Preference number: 2 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVMSHPS*QNFLLA
Trigger: TGCTAGGAGGAAATTTTGCCAAGAAGGATGGCTCAT...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp GAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACAAACAACTGAATGGCTaGAAAATGAATCCCCCGCTT +
Preference number: 2 (lower is better)
Translates to: EIYYIQQHGRPVRVLHIYKQLNG*KMNPPL
Trigger: AAGCGGGGGATTCATTTTTCAGCCATTCAGTTGTTT...GTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACACTTTTGGTCAGCAGGTaGTTACTATTTGGACGGAAC +
Preference number: 2 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTLLVSR*LLFGRN
Trigger: GTTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAG...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp CATATTTACATTAACTTAGATGTAGCAGTGCAAACCTTCACTCAACTGAGATCCGTCTCATGTAGAATGTaGTTTTGGTCAGCAGGTGCT +
Preference number: 2 (lower is better)
Translates to: HIYINLDVAVQTFTQLRSVSCRM*FWSAGA
Trigger: AGCACCTGCTGACCAAAAGCACATTCTACATGAGAC...GGATCTCAGTTGAGTGAAGGTTTGCACTGCTACATCTAAGTTAATGTAAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp TACTTTCTCATTCTCTTAGAGGATCTTATTGCCTCTTCCCGTACTGGAAATATTCTCTATCGAGGGTTTTaGGTTTCTTCAGCCTGTAAG +
Preference number: 2 (lower is better)
Translates to: YFLILLEDLIASSRTGNILYRGF*VSSACK
Trigger: CTTACAGGCTGAAGAAACCCAAAACCCTCGATAGAG...AATATTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAGAGAATGAGAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCACCTCCAGAAGCACTTaGGCTGTTTTACTTAACAAA +
Preference number: 2 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVTSRST*AVLLNK
Trigger: TTTGTTAAGTAAAACAGCCCAAGTGCTTCTGGAGGT...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR TCA 90 bp TACTTTCTCATTCTCTTAGAGGATCTTATTGCCTCTTCCCGTACTGGAAATATTCTTCATGTTAGAATTTaGGTGCGGATAGGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: YFLILLEDLIASSRTGNILHVRI*VRIGLQ
Trigger: CTGAAGACCTATCCGCACTCAAATTCTAACATGAAG...AATATTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAGAGAATGAGAAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp ACAATACAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTCTTAGAGGATCTTATTaGCTCTTCCCGTACTGGAAA +
Preference number: 2 (lower is better)
Translates to: TIQEDLQTLEIYYIQQHGLRGSY*LFPYWK
Trigger: TTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAG...ACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCCTGGGCAAGACAGTTTaGTTTTGGAATGAGAATTCA +
Preference number: 2 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSLGKTV*FWNENS
Trigger: TGAATTCTCATTCCAAAACCAAACTGTCTTGCCCAG...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACAACAGGTGATCTTGTCTaGGCAAGACAGTTTGGTTTT +
Preference number: 2 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTTGDLV*ARQFGF
Trigger: AAAACCAAACTGTCTTGCCCAGACAAGATCACCTGT...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp TACTTTCTCATTCTCTTAGAGGATCTTATTGCCTCTTCCCGTACTGGAAATATTGAGGAAACAACTGAATaGCTGAAAAATGAATCCCCC +
Preference number: 2 (lower is better)
Translates to: YFLILLEDLIASSRTGNIEETTE*LKNESP
Trigger: GGGGGATTCATTTTTCAGCCATTCAGTTGTTTCCTC...AATATTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAGAGAATGAGAAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp CATATTTACATTAACTTAGATGTAGCAGTGCAAACCTTCACTCAACTGAGATCCATGAGCCATCCTTCTTaGCAAAATTTCCTCCTAGCA +
Preference number: 2 (lower is better)
Translates to: HIYINLDVAVQTFTQLRSMSHPS*QNFLLA
Trigger: TGCTAGGAGGAAATTTTGCCAAGAAGGATGGCTCAT...GGATCTCAGTTGAGTGAAGGTTTGCACTGCTACATCTAAGTTAATGTAAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CAA 90 bp AATTCATCCTTGGTTATATCTATGCTGGAAAACTGTGGGTGTCCTTaGGATAAAGCATACAGGAGTTATCTACCAGGATTTAGATTTGGT +
Preference number: 2 (lower is better)
Translates to: NSSLVISMLENCGCP*DKAYRSYLPGFRFG
Trigger: ACCAAATCTAAATCCTGGTAGATAACTCCTGTATGCTTTATCCAAAGGACACCCACAGTTTTCCAGCATAGATATAACCAAGGATGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR GCA 90 bp ATTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTATACAGAAGGTGTCTTaGTATAATGGCTTCTTTTAC +
Preference number: 2 (lower is better)
Translates to: ILEQEKGDSFFHKAIPSPIQKVS*YNGFFY
Trigger: GTAAAAGAAGCCATTATAGCAAGACACCTTCTGTAT...AGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371564.8
3UTR-3UTR GCA 90 bp CATATTTACATTAACTTAGATGTAGCAGTGCAAACCTTCACTCAACTGAGATCCTCAATTAAATGCACATaGTTGAGATTCTCCACCGCT +
Preference number: 2 (lower is better)
Translates to: HIYINLDVAVQTFTQLRSSIKCT*LRFSTA
Trigger: AGCGGTGGAGAATCTCAAGCATGTGCATTTAATTGA...GGATCTCAGTTGAGTGAAGGTTTGCACTGCTACATCTAAGTTAATGTAAATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR GCA 90 bp GCTATACATATTATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTGCAATCAATTAAATGCACATaGTTGAGATTCTCCACCGCT +
Preference number: 2 (lower is better)
Translates to: AIHIIKQQHLCTIQEDLQSIKCT*LRFSTA
Trigger: AGCGGTGGAGAATCTCAAGCATGTGCATTTAATTGA...TTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGATAATATGTATAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp GCTATACATATTATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTGCAAAACCAGGATGCTCTCTaGGATTTAAAACATAAACCG +
Preference number: 2 (lower is better)
Translates to: AIHIIKQQHLCTIQEDLQNQDAL*DLKHKP
Trigger: CGGTTTATGTTTTAAATCCCAGAGAGCATCCTGGTT...TTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGATAATATGTATAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CAA 90 bp ATACATATTATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTaGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCT +
Preference number: 2 (lower is better)
Translates to: IHIIKQQHLCTIQED*QTLEIYYIQQHGRP
Trigger: AGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGATAATATGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CCA 90 bp AAAGCATACAGGAGTTATCTACCAGGATTTAGATTTGGTCCCTTCTGTAAATATCTGGGCAAGACAGTTTaGTTTTGGAATGAGAATTCA +
Preference number: 2 (lower is better)
Translates to: KAYRSYLPGFRFGPFCKYLGKTV*FWNENS
Trigger: TGAATTCTCATTCCAAAACCAAACTGTCTTGCCCAG...ATATTTACAGAAGGGACCAAATCTAAATCCTGGTAGATAACTCCTGTATGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR GCA 90 bp AAAGCATACAGGAGTTATCTACCAGGATTTAGATTTGGTCCCTTCTGTAAATATGTAGACCTGTCAGAGTaGTACATATTTACATTAACT +
Preference number: 2 (lower is better)
Translates to: KAYRSYLPGFRFGPFCKYVDLSE*YIFTLT
Trigger: AGTTAATGTAAATATGTAGCACTCTGACAGGTCTAC...ATATTTACAGAAGGGACCAAATCTAAATCCTGGTAGATAACTCCTGTATGCTTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR GCA 72 bp GCCCTAGCCTCGAGCCTAGGAGACCCAAGGTTAAGATaGGCTGGGTCACCGAGCACCTTGCCTCCGGGAAAC +
Preference number: 3 (lower is better)
Translates to: ALASSLGDPRLR*AGSPSTLPPGN
Trigger: GTTTCCCGGAGGCAAGGTGCTCGGTGACCCAGCGCATCTTAACCTTGGGTCTCCTAGGCTCGAGGCTAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CAA 90 bp GCATCCAGGTTGTACAGCTGCAGCAGACAGGTGCTTGCTCTCTGCAGCCTGGGTTTAGCTGTGGCCCAGTaGTGGCATGGACTGGGCGAG +
Preference number: 3 (lower is better)
Translates to: ASRLYSCSRQVLALCSLGLAVAQ*WHGLGE
Trigger: CTCGCCCAGTCCATGCCACAACTGGGCCACAGCTAA...ACCCAGGCTGCAGAGAGCAAGCACCTGTCTGCTGCAGCTGTACAACCTGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CCA 72 bp AGCCTCGAGCCTAGGAGACCCAAGGTTAAGATGCGCTaGGTCACCGAGCACCTTGCCTCCGGGAAACAAGTT +
Preference number: 3 (lower is better)
Translates to: SLEPRRPKVKMR*VTEHLASGKQV
Trigger: AACTTGTTTCCCGGAGGCAAGGTGCTCGGTGACCCAGCGCATCTTAACCTTGGGTCTCCTAGGCTCGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CAA 90 bp ACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGCACTTAGTGCCCATACATaGATCCGCGTGTGGACTCCG +
Preference number: 3 (lower is better)
Translates to: TARQDSSRARCPGQPFKALSAHT*IRVWTP
Trigger: CGGAGTCCACACGCGGATCAATGTATGGGCACTAAG...TGCTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR GCA 72 bp AAGCCGGAACCTTGCAAAGCATCCAGGTTGTACAGCTaGAGCAGACAGGTGCTTGCTCTCTGCAGCCTGGGT +
Preference number: 3 (lower is better)
Translates to: KPEPCKASRLYS*SRQVLALCSLG
Trigger: ACCCAGGCTGCAGAGAGCAAGCACCTGTCTGCTGCAGCTGTACAACCTGGATGCTTTGCAAGGTTCCGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CAA 90 bp CCTAGCCTCGAGCCTAGGAGACCCAAGGTTAAGATGCGCTGGGTCACCGAGCACTGCTCTGAGAACTCCTaGCCTTCAAAAGGTACAGGA +
Preference number: 3 (lower is better)
Translates to: PSLEPRRPKVKMRWVTEHCSENS*PSKGTG
Trigger: TCCTGTACCTTTTGAAGGCAAGGAGTTCTCAGAGCA...GTGCTCGGTGACCCAGCGCATCTTAACCTTGGGTCTCCTAGGCTCGAGGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CAA 90 bp TGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGGGCACTGAGTGCAAAGCATCCAGGTaGTACAGCTGCAGCAGACAG +
Preference number: 3 (lower is better)
Translates to: WVTLTGEPGLTKPTVGTECKASR*YSCSRQ
Trigger: CTGTCTGCTGCAGCTGTACAACCTGGATGCTTTGCA...CTCAGTGCCCACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR GCA 72 bp GATGCTAAGCTTGTCCCAACAGCCATAGCCTCGGTCTaGTCAGGCCAATCAGAATGCTGTGAGCACCTGCTC +
Preference number: 3 (lower is better)
Translates to: DAKLVPTAIASV*SGQSECCEHLL
Trigger: GAGCAGGTGCTCACAGCATTCTGATTGGCCTGAGCAGACCGAGGCTATGGCTGTTGGGACAAGCTTAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR CCA 72 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTaGACTCCGGGCTGGGAGATGAACATGAAAGGAGAC +
Preference number: 3 (lower is better)
Translates to: ESPLSAHTLIRV*TPGWEMNMKGD
Trigger: GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
3UTR CCA 72 bp ACACACCTGGCCCCACTCCCAGGAAGCTTTTACCTCTaGGTAACCTTGACGGGAGAGCCAGGACTTACAAAG +
Preference number: 3 (lower is better)
Translates to: THLAPLPGSFYL*VTLTGEPGLTK
Trigger: CTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCCTGGGAGTGGGGCCAGGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CCA 72 bp TGCACAGGCCCGAATCTGAGCATTTTGCCTTCTATCTaGAGTGCCAAACACACCTGGCCCCACTCCCAGGAA +
Preference number: 3 (lower is better)
Translates to: CTGPNLSILPSI*SAKHTWPHSQE
Trigger: TTCCTGGGAGTGGGGCCAGGTGTGTTTGGCACTCCAGATAGAAGGCAAAATGCTCAGATTCGGGCCTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CAA 90 bp GCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCTGTTTTTAGCTGTGGCCCAGTaGTGGCATGGACTGGGCGAG +
Preference number: 3 (lower is better)
Translates to: ALFLYLGRNPPPEALGLFLAVAQ*WHGLGE
Trigger: CTCGCCCAGTCCATGCCACAACTGGGCCACAGCTAA...AAACAGCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR GCA 72 bp AGGCCCGAATCTGAGCATTTTGCCTTCTATCTGGAGTaGCAAACACACCTGGCCCCACTCCCAGGAAGCTTT +
Preference number: 3 (lower is better)
Translates to: RPESEHFAFYLE*QTHLAPLPGSF
Trigger: AAAGCTTCCTGGGAGTGGGGCCAGGTGTGTTTGGCACTCCAGATAGAAGGCAAAATGCTCAGATTCGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CCA 72 bp GCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTaGGGTTTAATCACAGTGCCCACATCTTCTGTCCCC +
Preference number: 3 (lower is better)
Translates to: AVSVTWKNERKG*GLITVPTSSVP
Trigger: GGGGACAGAAGATGTGGGCACTGTGATTAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CCA 72 bp CAAAAATCACACCCACAGAGGAAGACTAGGGGAGACTaGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAA +
Preference number: 3 (lower is better)
Translates to: QKSHPQRKTRGD*VRSVETVGRKE
Trigger: TTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTGTGGGTGTGATTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CAA 90 bp GTTAAGATGCGCTGGGTCACCGAGCACCTTGCCTCCGGGAAACAAGTTCGGGAACTTTGCTGCGGATTATaGAGGAAACAACTGAATGGC +
Preference number: 3 (lower is better)
Translates to: VKMRWVTEHLASGKQVRELCCGL*RKQLNG
Trigger: GCCATTCAGTTGTTTCCTCAATAATCCGCAGCAAAG...TTCCCGAACTTGTTTCCCGGAGGCAAGGTGCTCGGTGACCCAGCGCATCTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CAA 90 bp GGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAAAGCAGGTGCTTACTATTaGGACGGAACACCATTAAGA +
Preference number: 3 (lower is better)
Translates to: GRLGETGCAQWKQLGGRKAGAYY*DGTPLR
Trigger: TCTTAATGGTGTTCCGTCCAAATAGTAAGCACCTGC...TTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CAA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTGCAAAGCATCCAGGTaGTACAGCTGCAGCAGACAG +
Preference number: 3 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKCKASR*YSCSRQ
Trigger: CTGTCTGCTGCAGCTGTACAACCTGGATGCTTTGCA...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CAA 90 bp GAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGAGATGCACGCGTACAGGAGGTaGAGCTACCAGGAGGCCGTT +
Preference number: 3 (lower is better)
Translates to: EQEKGDSFFHKAIPSPEMHAYRR*SYQEAV
Trigger: AACGGCCTCCTGGTAGCTCAACCTCCTGTACGCGTG...CATCTCAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR TCA 72 bp AAGCTGGGCTCTTGGGTCACGTTCCTTTGGTTGCTCTaGGAACTCCTTGCCTTCAAAAGGTACAGGAGCTGT +
Preference number: 3 (lower is better)
Translates to: KLGSWVTFLWLL*ELLAFKRYRSC
Trigger: ACAGCTCCTGTACCTTTTGAAGGCAAGGAGTTCTCAGAGCAACCAAAGGAACGTGACCCAAGAGCCCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR GCA 72 bp CCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTTGGTTaGTCTGAGAACTCCTTGCCTTCAAAAGGTACAGGA +
Preference number: 3 (lower is better)
Translates to: PVSWALGSRSFG*SENSLPSKGTG
Trigger: TCCTGTACCTTTTGAAGGCAAGGAGTTCTCAGAGCAACCAAAGGAACGTGACCCAAGAGCCCAGCTTACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CCA 72 bp TCTATCGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTaGGCTCTTGGGTCACGTTCCTTTGGTTGCTCTGAG +
Preference number: 3 (lower is better)
Translates to: SIEGFGFLQPVS*ALGSRSFGCSE
Trigger: CTCAGAGCAACCAAAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCGATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CCA 72 bp CCTGCCAGCACCACCATGTTGGAGAGACCTGTTTGTTaGAGAATTGGTTTTCTCTCCTCTGAGGGCTGTAGA +
Preference number: 3 (lower is better)
Translates to: PASTTMLERPVC*RIGFLSSEGCR
Trigger: TCTACAGCCCTCAGAGGAGAGAAAACCAATTCTCCAACAAACAGGTCTCTCCAACATGGTGGTGCTGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CAA 90 bp AGGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAATGCAAAGCATCCAGGTaGTACAGCTGCAGCAGACAG +
Preference number: 3 (lower is better)
Translates to: RSSENKSLTTHSWLFPSECKASR*YSCSRQ
Trigger: CTGTCTGCTGCAGCTGTACAACCTGGATGCTTTGCA...TTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR TCA 72 bp ACCGACAGGTTGCATACAAGTGCACAGGCCCGAATCTaGGCATTTTGCCTTCTATCTGGAGTGCCAAACACA +
Preference number: 3 (lower is better)
Translates to: TDRLHTSAQARI*AFCLLSGVPNT
Trigger: TGTGTTTGGCACTCCAGATAGAAGGCAAAATGCTCAGATTCGGGCCTGTGCACTTGTATGCAACCTGTCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CAA 90 bp TGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAAGAACTTAGTGCCCATACATaGATCCGCGTGTGGACTCCG +
Preference number: 3 (lower is better)
Translates to: CPGVSAVHANRNKHICQELSAHT*IRVWTP
Trigger: CGGAGTCCACACGCGGATCAATGTATGGGCACTAAG...TTCTTGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR TCA 72 bp CATAGCCTCGGTCTGCTCAGGCCAATCAGAATGCTGTaGGCACCTGCTCTAATGGAAACAACATCATTTGCA +
Preference number: 3 (lower is better)
Translates to: HSLGLLRPIRML*APALMETTSFA
Trigger: TGCAAATGATGTTGTTTCCATTAGAGCAGGTGCTCACAGCATTCTGATTGGCCTGAGCAGACCGAGGCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR GCA 72 bp CGGTCTGCTCAGGCCAATCAGAATGCTGTGAGCACCTaGTCTAATGGAAACAACATCATTTGCATCCATTCC +
Preference number: 3 (lower is better)
Translates to: RSAQANQNAVST*SNGNNIICIHS
Trigger: GGAATGGATGCAAATGATGTTGTTTCCATTAGAGCAGGTGCTCACAGCATTCTGATTGGCCTGAGCAGACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CAA 90 bp AATGAATCCCCCGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAAAAGCAAGCCGGAACCTaGCAAAGCATCCAGGTTGTA +
Preference number: 3 (lower is better)
Translates to: NESPACPGVSAVHANRNKKQAGT*QSIQVV
Trigger: TACAACCTGGATGCTTTGCAAGGTTCCGGCTTGCTT...TTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCGGGGGATTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CAA 90 bp GTGCGGATAGGTCTTCAGGGGCAGAAGGGATCTTTAAATAGGTTCAGGTCAAATCCCACACTTCTTTTCTaGGTTGCTTTAGCCCTTCTG +
Preference number: 3 (lower is better)
Translates to: VRIGLQGQKGSLNRFRSNPTLLF*VALALL
Trigger: CAGAAGGGCTAAAGCAACCAAGAAAAGAAGTGTGGG...ATTTGACCTGAACCTATTTAAAGATCCCTTCTGCCCCTGAAGACCTATCCGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CCA 72 bp AGGTCGAGTGAGAACAAATCACTCACCACACACTCTTaGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGAG +
Preference number: 3 (lower is better)
Translates to: RSSENKSLTTHS*LFPSEVNIAGE
Trigger: CTCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CAA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCGTATCGACCGACAGGTaGCATACAAGTGCACAGGCC +
Preference number: 3 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSVSTDR*HTSAQA
Trigger: GGCCTGTGCACTTGTATGCAACCTGTCGGTCGATAC...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR GCA 72 bp CAGGGAAAAATAAATGCTAGGTATCGACCGACAGGTTaGATACAAGTGCACAGGCCCGAATCTGAGCATTTT +
Preference number: 3 (lower is better)
Translates to: QGKINARYRPTG*IQVHRPESEHF
Trigger: AAAATGCTCAGATTCGGGCCTGTGCACTTGTATGCAACCTGTCGGTCGATACCTAGCATTTATTTTTCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR GCA 72 bp ATTGGAATGCAGGAAAATACTTGCTATGCAATTGGCTaGTTTGGTTCCACGAAACGTAATGCCCTAGCCTCG +
Preference number: 3 (lower is better)
Translates to: IGMQENTCYAIG*FGSTKRNALAS
Trigger: CGAGGCTAGGGCATTACGTTTCGTGGAACCAAAGCAGCCAATTGCATAGCAAGTATTTTCCTGCATTCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CAA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACACTTAGTGCCCATACATaGATCCGCGTGTGGACTCCG +
Preference number: 3 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTLSAHT*IRVWTP
Trigger: CGGAGTCCACACGCGGATCAATGTATGGGCACTAAG...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CAA 90 bp ATTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTTTGGGTCACGTTCCTTaGGTTGCTCTGAGAACTCCT +
Preference number: 3 (lower is better)
Translates to: ILEQEKGDSFFHKAIPSPLGHVP*VALRTP
Trigger: AGGAGTTCTCAGAGCAACCAAAGGAACGTGACCCAA...AGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CAA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCTTGGGTCACGTTCCTTaGGTTGCTCTGAGAACTCCT +
Preference number: 3 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVLGHVP*VALRTP
Trigger: AGGAGTTCTCAGAGCAACCAAAGGAACGTGACCCAA...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CAA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGACTTTGCTGCGGATTATaGAGGAAACAACTGAATGGC +
Preference number: 3 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGLCCGL*RKQLNG
Trigger: GCCATTCAGTTGTTTCCTCAATAATCCGCAGCAAAG...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CCA 72 bp GATTTTCTAAACCTAAGCCTGCCAGCACCACCATGTTaGAGAGACCTGTTTGTTGGAGAATTGGTTTTCTCT +
Preference number: 3 (lower is better)
Translates to: DFLNLSLPAPPC*RDLFVGELVFS
Trigger: AGAGAAAACCAATTCTCCAACAAACAGGTCTCTCCAACATGGTGGTGCTGGCAGGCTTAGGTTTAGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CAA 90 bp CAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTCCCACACTTCTTTTCTaGGTTGCTTTAGCCCTTCTG +
Preference number: 3 (lower is better)
Translates to: QEDLQTLEIYYIQQHGRPPTLLF*VALALL
Trigger: CAGAAGGGCTAAAGCAACCAAGAAAAGAAGTGTGGG...AGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CAA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCCCCACACTTCTTTTCTaGGTTGCTTTAGCCCTTCTG +
Preference number: 3 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVPTLLF*VALALL
Trigger: CAGAAGGGCTAAAGCAACCAAGAAAAGAAGTGTGGG...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CAA 90 bp AAAGCATACAGGAGTTATCTACCAGGATTTAGATTTGGTCCCTTCTGTAAATATTACCTCTGGGTAACCTaGACGGGAGAGCCAGGACTT +
Preference number: 3 (lower is better)
Translates to: KAYRSYLPGFRFGPFCKYYLWVT*TGEPGL
Trigger: AAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTA...ATATTTACAGAAGGGACCAAATCTAAATCCTGGTAGATAACTCCTGTATGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR-3UTR CAA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCCCGAATCTGAGCATTTaGCCTTCTATCTGGAGTGCC +
Preference number: 3 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSPNLSI*PSIWSA
Trigger: GGCACTCCAGATAGAAGGCAAAATGCTCAGATTCGG...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CAA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAATTAAATGCACATGCTaGAGATTCTCCACCGCTTTA +
Preference number: 3 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGIKCTC*RFSTAL
Trigger: TAAAGCGGTGGAGAATCTCAAGCATGTGCATTTAAT...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CAA 90 bp GCTATACATATTATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTGCAACCGAATCTGAGCATTTaGCCTTCTATCTGGAGTGCC +
Preference number: 3 (lower is better)
Translates to: AIHIIKQQHLCTIQEDLQPNLSI*PSIWSA
Trigger: GGCACTCCAGATAGAAGGCAAAATGCTCAGATTCGG...TTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGATAATATGTATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR GCA 72 bp ACACCCCTACTTTCTCATTCTCTTAGAGGATCTTATTaGCTCTTCCCGTACTGGAAATATTTCATGAGCCAT +
Preference number: 3 (lower is better)
Translates to: TPLLSHSLRGSY*LFPYWKYFMSH
Trigger: ATGGCTCATGAAATATTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAGAGAATGAGAAAGTAGGGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CAA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACATGCTCTGAGAACTCCTaGCCTTCAAAAGGTACAGGA +
Preference number: 3 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTCSENS*PSKGTG
Trigger: TCCTGTACCTTTTGAAGGCAAGGAGTTCTCAGAGCA...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR TCA 72 bp ACATGTCATAACTTAACGCCAAGAAGTCTTAACAGGTaGTCTTGTCTGGGCAAGACAGTTTGGTTTTGGAAT +
Preference number: 3 (lower is better)
Translates to: TCHNLTPRSLNR*SCLGKTVWFWN
Trigger: ATTCCAAAACCAAACTGTCTTGCCCAGACAAGATCACCTGTTAAGACTTCTTGGCGTTAAGTTATGACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CCA 72 bp CATTCTCTTAGAGGATCTTATTGCCTCTTCCCGTACTaGAAATATTTCATGAGCCATCCTTCTTGGCAAAAT +
Preference number: 3 (lower is better)
Translates to: HSLRGSYCLFPY*KYFMSHPSWQN
Trigger: ATTTTGCCAAGAAGGATGGCTCATGAAATATTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAGAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR-3UTR CAA 90 bp AAAGCATACAGGAGTTATCTACCAGGATTTAGATTTGGTCCCTTCTGTAAATATGCAGGTGCTTACTATTaGGACGGAACACCATTAAGA +
Preference number: 3 (lower is better)
Translates to: KAYRSYLPGFRFGPFCKYAGAYY*DGTPLR
Trigger: TCTTAATGGTGTTCCGTCCAAATAGTAAGCACCTGC...ATATTTACAGAAGGGACCAAATCTAAATCCTGGTAGATAACTCCTGTATGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR TCA 72 bp TCCTTCTTGGCAAAATTTCCTCCTAGCATTTGTAACTaGCAAAACTTCCTTGATAGCTGTCAGTTCCTAATA +
Preference number: 3 (lower is better)
Translates to: SFLAKFPPSICN*QNFLDSCQFLI
Trigger: TATTAGGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATTTTGCCAAGAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR GCA 72 bp ACATGCAACCGAATAGAGCTCATTCAAAGTAAAGGATaGATTCGAGTAGATTTCTTCATGTTAGAATTTGAG +
Preference number: 3 (lower is better)
Translates to: TCNRIELIQSKG*IRVDFFMLEFE
Trigger: CTCAAATTCTAACATGAAGAAATCTACTCGAATGCATCCTTTACTTTGAATGAGCTCTATTCGGTTGCATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGCGGGCACGGGCAGGGTaGACCTCGGGCTGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWERARAG*TSGWRP
Trigger: TGGCCGCCAGCCCGAGGTTCACCCTGCCCGTGCCCG...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR TCA 90 bp CAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGCGGGCACGGGCAGGGTaGACCTCGGGCTGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: QRKTRGDWVRSVETVGRKRARAG*TSGWRP
Trigger: TGGCCGCCAGCCCGAGGTTCACCCTGCCCGTGCCCG...CTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGCTTGGCACCAGGCGATaGGGAGCGGGAGGCCGGACG +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWELGTRR*GAGGRT
Trigger: CGTCCGGCCTCCCGCTCCTCATCGCCTGGTGCCAAG...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGTGGCGCAGCGGGTCCTaGACGCGCCCGGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWWRSGS*TRPGKL
Trigger: CAGCTTCCCCGGGCGCGTCCAGGACCCGCTGCGCCA...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000610033.5
CDS-3UTR CCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGAGCAGGGCTGAGCTCTaGCCCTGGGAGCCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWESRAEL*PWEPAC
Trigger: GCACGCCGGCTCCCAGGGCCAGAGCTCAGCCCTGCT...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGTCCTGGGGTGCCACGTaGGATGAGGGCTGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWESWGAT*DEGCGE
Trigger: CTCGCCGCAGCCCTCATCTCACGTGGCACCCCAGGA...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGCGGGCGTCAGGGGATaGGAGCCCCGTGCGGAACTG +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWAGVRG*EPRAEL
Trigger: CAGTTCCGCACGGGGCTCTCATCCCCTGACGCCCGC...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGACAGCGGGGCGGCCATaGGGGCCGGCTGCTGATAGC +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWTAGRP*GPAADS
Trigger: GCTATCAGCAGCCGGCCCTCATGGCCGCCCCGCTGT...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGCCTCTGACCTTGACTaGCCGGGGGCGGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWASDLD*PGAGQV
Trigger: GACCTGGCCCGCCCCCGGTCAGTCAAGGTCAGAGGC...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGTCTTCTCTACCGCGTaGCCGCGGGGCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWVFSTA*PRGCPG
Trigger: GCCAGGGCAGCCCCGCGGGCACGCGGTAGAGAAGAC...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609507.1
ENST00000609943.5
CDS-3UTR CCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAGCTCGGGGGCGTTCATaGCGCGCAGGGCGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGARGRS*RAGREG
Trigger: GCCTTCCCGCCCTGCGCGCCATGAACGCCCCCGAGC...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000610033.5
CDS-3UTR CCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGCCCGTGCGGAACTGCTaGCAGGGAGCCATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWEPVRNC*QGAMVA
Trigger: GGCCACCATGGCTCCCTGCCAGCAGTTCCGCACGGG...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp CACACCCACAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGCTTGGCACCAGGCGATaGGGAGCGGGAGGCCGGACG +
Preference number: 4 (lower is better)
Translates to: HTHRGRLGETGCAQWKQLLGTRR*GAGGRT
Trigger: CGTCCGGCCTCCCGCTCCTCATCGCCTGGTGCCAAG...CAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTGTGGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGGGGTGCCACGTGAGATaGGGGCTGCGGCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVGCHVR*GLRRGA
Trigger: AGCCCCTCGCCGCAGCCCTCATCTCACGTGGCACCC...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAGCGGGCGTCAGGGGATaGGAGCCCCGTGCGGAACTG +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGAGVRG*EPRAEL
Trigger: CAGTTCCGCACGGGGCTCTCATCCCCTGACGCCCGC...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGACAGCGGGGCGGCCATaGGGGCCGGCTGCTGATAGC +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVTAGRP*GPAADS
Trigger: GCTATCAGCAGCCGGCCCTCATGGCCGCCCCGCTGT...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGACCAGCACAGAGCGGTaGGCGTCCGCAAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWETSTER*ASARDS
Trigger: GCTGTCCCTTGCGGACGCTCACCGCTCTGTGCTGGT...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp TGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGGGCACTGAGGGCCCGCGTCTCTCATaGGGAGGGGCCCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: WVTLTGEPGLTKPTVGTEGPRLS*GGAPLP
Trigger: AGGCAGTGGGGCCCCTCCGCATGAGAGACGCGGGCC...CTCAGTGCCCACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGGCCCGCGTCTCTCATaGGGAGGGGCCCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: QRKTRGDWVRSVETVGRKGPRLS*GGAPLP
Trigger: AGGCAGTGGGGCCCCTCCGCATGAGAGACGCGGGCC...CTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAGGCCCGCGTCTCTCATaGGGAGGGGCCCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGGPRLS*GGAPLP
Trigger: AGGCAGTGGGGCCCCTCCGCATGAGAGACGCGGGCC...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR GCA 90 bp GAACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGGGCCCGCGTCTCTCATaGGGAGGGGCCCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: EQLAKTAPGLGALVSLLKGPRLS*GGAPLP
Trigger: AGGCAGTGGGGCCCCTCCGCATGAGAGACGCGGGCC...CTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TGCTTTGGTTCCACGAAACGTAATGCCCTAGCCTCGAGCCTAGGAGACCCAAGGTGGGACCCCTCGCAGTaGGGCTGGCGGAGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: CFGSTKRNALASSLGDPRWDPSQ*GWRRRL
Trigger: GAGCCGCCTCCGCCAGCCCCACTGCGAGGGGTCCCA...CCTTGGGTCTCCTAGGCTCGAGGCTAGGGCATTACGTTTCGTGGAACCAAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGGCTCGGGGGCGTTCATaGCGCGCAGGGCGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVARGRS*RAGREG
Trigger: GCCTTCCCGCCCTGCGCGCCATGAACGCCCCCGAGC...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000610033.5
CDS-3UTR CCA 90 bp CACACCCACAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGCAGGCCGGCCTTGGATaGGGCGGCAGACACCGGCGA +
Preference number: 4 (lower is better)
Translates to: HTHRGRLGETGCAQWKQLQAGLG*GGRHRR
Trigger: TCGCCGGTGTCTGCCGCCCCATCCAAGGCCGGCCTG...CAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTGTGGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGCAGGCCGGCCTTGGATaGGGCGGCAGACACCGGCGA +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVQAGLG*GGRHRR
Trigger: TCGCCGGTGTCTGCCGCCCCATCCAAGGCCGGCCTG...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGGCGAGGCCTGCTGGTTaGTCGGAGAGGGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWEARPAG*SERGGA
Trigger: TGCTCCACCCCTCTCCGACCAACCAGCAGGCCTCGC...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CCTAGCCTCGAGCCTAGGAGACCCAAGGTTAAGATGCGCTGGGTCACCGAGCACGAAGGTGAGGGGCTGTaGAGGGCTCCGAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PSLEPRRPKVKMRWVTEHEGEGL*RAPRGQ
Trigger: CTGACCCCTCGGAGCCCTCCACAGCCCCTCACCTTC...GTGCTCGGTGACCCAGCGCATCTTAACCTTGGGTCTCCTAGGCTCGAGGCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGACCATGGGCAGCTCGTaGGCAGATCGCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWETMGSS*ADRWEH
Trigger: GTGCTCCCAGCGATCTGCTCACGAGCTGCCCATGGT...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGACCAGCACAGAGCGGTaGGCGTCCGCAAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWTSTER*ASARDS
Trigger: GCTGTCCCTTGCGGACGCTCACCGCTCTGTGCTGGT...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGGCCTCTGACCTTGACTaGCCGGGGGCGGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMASDLD*PGAGQV
Trigger: GACCTGGCCCGCCCCCGGTCAGTCAAGGTCAGAGGC...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGCCGTCGGGTTGGGGCTaGCGCTCGGGGGCGTTCATG +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMPSGWG*RSGAFM
Trigger: CATGAACGCCCCCGAGCGGCAGCCCCAACCCGACGG...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000610033.5
CDS-3UTR GCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACCAGGCCCGAGGCCCCTaGTGGCTTGGCCGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDQARGP*WLGRAQ
Trigger: CTGAGCGCGGCCAAGCCAGCAGGGGCCTCGGGCCTG...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR GCA 90 bp GAACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGGCCTCGGCGCACGAATaGCTCCGCTTGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: EQLAKTAPGLGALVSLLKASAHE*LRLAPG
Trigger: GCCTGGTGCCAAGCGGAGGCATTCGTGCGCCGAGGC...CTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAAACGGGCCCGCCGTTATTaGGCGAGACGCAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GRLGETGCAQWKQLGGRKRARRY*ARRRAR
Trigger: CCTCGCCCTGCGTCTCGCCCAATAACGGCGGGCCCG...TTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGCGGGCCCGCCGTTATTaGGCGAGACGCAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMRARRY*ARRRAR
Trigger: CCTCGCCCTGCGTCTCGCCCAATAACGGCGGGCCCG...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR CCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGGCGAGGGGTCAGGGCTaGTCTTCCACATCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWEARGQG*SSTSWG
Trigger: CCCCCAAGATGTGGAAGACCAGCCCTGACCCCTCGC...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGCAGGCCGGCCTTGGATaGGGCGGCAGACACCGGCGA +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMQAGLG*GGRHRR
Trigger: TCGCCGGTGTCTGCCGCCCCATCCAAGGCCGGCCTG...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGGAGGCAGGCCGGCCTTaGATGGGGCGGCAGACACCG +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMEAGRP*MGRQTP
Trigger: CGGTGTCTGCCGCCCCATCCAAGGCCGGCCTGCCTC...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGCAGGCACCAGCGGCTTaGGCCAAGTGGGCGGAACCA +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWQAPAA*AKWAEP
Trigger: TGGTTCCGCCCACTTGGCCCAAGCCGCTGGTGCCTG...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAGCTGGCAGGGAGCCATaGTGGCCACGAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGAGREP*WPRGRR
Trigger: CCTCCTGCCTCGTGGCCACCATGGCTCCCTGCCAGC...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGGCTGAGCTCTGGCCCTaGGAGCCGGCGTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMAELWP*EPACTS
Trigger: GCTGGTGCACGCCGGCTCCCAGGGCCAGAGCTCAGC...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAGCAGGGCTGAGCTCTaGCCCTGGGAGCCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMSRAEL*PWEPAC
Trigger: GCACGCCGGCTCCCAGGGCCAGAGCTCAGCCCTGCT...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CCTAGCCTCGAGCCTAGGAGACCCAAGGTTAAGATGCGCTGGGTCACCGAGCACTTGGTCGGAGAGGGGTaGAGCAGGGCTGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PSLEPRRPKVKMRWVTEHLVGEG*SRAELW
Trigger: CCAGAGCTCAGCCCTGCTCCACCCCTCTCCGACCAA...GTGCTCGGTGACCCAGCGCATCTTAACCTTGGGTCTCCTAGGCTCGAGGCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp GCATCCAGGTTGTACAGCTGCAGCAGACAGGTGCTTGCTCTCTGCAGCCTGGGTGCGAGGCCTGCTGGTTaGTCGGAGAGGGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: ASRLYSCSRQVLALCSLGARPAG*SERGGA
Trigger: TGCTCCACCCCTCTCCGACCAACCAGCAGGCCTCGC...ACCCAGGCTGCAGAGAGCAAGCACCTGTCTGCTGCAGCTGTACAACCTGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp ATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCCGGGCACGGGCAGGGTaGACCTCGGGCTGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: IQPFSSILVETHLQKHLGRARAG*TSGWRP
Trigger: TGGCCGCCAGCCCGAGGTTCACCCTGCCCGTGCCCG...GCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTCGGGCACGGGCAGGGTaGACCTCGGGCTGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFRARAG*TSGWRP
Trigger: TGGCCGCCAGCCCGAGGTTCACCCTGCCCGTGCCCG...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000414705.5
CDS-3UTR TCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGACTTGGCACCAGGCGATaGGGAGCGGGAGGCCGGACG +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRLGTRR*GAGGRT
Trigger: CGTCCGGCCTCCCGCTCCTCATCGCCTGGTGCCAAG...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GGAAGCTTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCGGGTGCCACGTGAGATaGGGGCTGCGGCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GSFYLWVTLTGEPGLTKPGCHVR*GLRRGA
Trigger: AGCCCCTCGCCGCAGCCCTCATCTCACGTGGCACCC...GGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAGGGTGCCACGTGAGATaGGGGCTGCGGCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRGCHVR*GLRRGA
Trigger: AGCCCCTCGCCGCAGCCCTCATCTCACGTGGCACCC...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGCAGCTCGTAAGAGCCTaGCTGACTGGACAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWEQLVRA*LTGQRP
Trigger: TGGCCGCTGTCCAGTCAGTCAGGCTCTTACGAGCTG...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGCGGGCGTCAGGGGATaGGAGCCCCGTGCGGAACTG +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKAGVRG*EPRAEL
Trigger: CAGTTCCGCACGGGGCTCTCATCCCCTGACGCCCGC...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp CGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTACAGCGGGGCGGCCATaGGGGCCGGCTGCTGATAGC +
Preference number: 4 (lower is better)
Translates to: RGFWVSSACKLGSWVTFLTAGRP*GPAADS
Trigger: GCTATCAGCAGCCGGCCCTCATGGCCGCCCCGCTGT...AAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCACAGCGGGGCGGCCATaGGGGCCGGCTGCTGATAGC +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFTAGRP*GPAADS
Trigger: GCTATCAGCAGCCGGCCCTCATGGCCGCCCCGCTGT...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAACCAGCACAGAGCGGTaGGCGTCCGCAAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGTSTER*ASARDS
Trigger: GCTGTCCCTTGCGGACGCTCACCGCTCTGTGCTGGT...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GGAAGCTTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCGCCTCTGACCTTGACTaGCCGGGGGCGGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GSFYLWVTLTGEPGLTKPASDLD*PGAGQV
Trigger: GACCTGGCCCGCCCCCGGTCAGTCAAGGTCAGAGGC...GGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGACCGTCGGGTTGGGGCTaGCGCTCGGGGGCGTTCATG +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRPSGWG*RSGAFM
Trigger: CATGAACGCCCCCGAGCGGCAGCCCCAACCCGACGG...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000610033.5
CDS-3UTR GCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGCTCGTCTTGGGGGCTaGCCCCAGGCTCGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKARLGG*PQARGL
Trigger: CAGGCCACGAGCCTGGGGGCAGCCCCCAAGACGAGC...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000610033.5
CDS-3UTR GCA 90 bp GCATCCAGGTTGTACAGCTGCAGCAGACAGGTGCTTGCTCTCTGCAGCCTGGGTGACATCATCGGGGTATaGGGGTCCGGAGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: ASRLYSCSRQVLALCSLGDIIGV*GSGGWA
Trigger: AGCCCACCCTCCGGACCCGCATACCCCGATGATGTC...ACCCAGGCTGCAGAGAGCAAGCACCTGTCTGCTGCAGCTGTACAACCTGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGGCGGAGGGGCCCCACTaGCTGGATCAGTTCGTGGGA +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVAEGPH*LDQFVG
Trigger: TCCCACGAACTGATCCAGGCAGTGGGGCCCCTCCGC...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR GCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGTGGGGCTCAGGCTCTTaGTCCGCTGGTAGAGTACGG +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWEWGSGS*SAGRVR
Trigger: CCGTACTCTACCAGCGGAGCAAGAGCCTGAGCCCCA...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGCGGAGGGGATGGCAGTaGCCCAGTCTGAACGCAGCC +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVRRGWQ*PSLNAA
Trigger: GGCTGCGTTCAGACTGGGGCACTGCCATCCCCTCCG...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
CDS-3UTR CCA 90 bp CCTAGCCTCGAGCCTAGGAGACCCAAGGTTAAGATGCGCTGGGTCACCGAGCACAGGCCCCTGCTGGCTTaGCCGCGCTCAGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: PSLEPRRPKVKMRWVTEHRPLLA*PRSETS
Trigger: AGAAGTTTCTGAGCGCGGCCAAGCCAGCAGGGGCCT...GTGCTCGGTGACCCAGCGCATCTTAACCTTGGGTCTCCTAGGCTCGAGGCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGCAGGCCGGCCTTGGATaGGGCGGCAGACACCGGCGA +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKQAGLG*GGRHRR
Trigger: TCGCCGGTGTCTGCCGCCCCATCCAAGGCCGGCCTG...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAGAGGCAGGCCGGCCTTaGATGGGGCGGCAGACACCG +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDREAGRP*MGRQTP
Trigger: CGGTGTCTGCCGCCCCATCCAAGGCCGGCCTGCCTC...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACGAGGCAGGCCGGCCTTaGATGGGGCGGCAGACACCG +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDEAGRP*MGRQTP
Trigger: CGGTGTCTGCCGCCCCATCCAAGGCCGGCCTGCCTC...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGCTGGGATGCTGCAGATaGGAATGGCAGGCACCAGCG +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWELGCCR*EWQAPA
Trigger: CGCTGGTGCCTGCCATTCCCATCTGCAGCATCCCAG...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGCCCGTGCGGAACTGCTaGCAGGGAGCCATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVPVRNC*QGAMVA
Trigger: GGCCACCATGGCTCCCTGCCAGCAGTTCCGCACGGG...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCGCTGAGCTCTGGCCCTaGGAGCCGGCGTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFAELWP*EPACTS
Trigger: GCTGGTGCACGCCGGCTCCCAGGGCCAGAGCTCAGC...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGCAGGGCTGAGCTCTaGCCCTGGGAGCCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRSRAEL*PWEPAC
Trigger: GCACGCCGGCTCCCAGGGCCAGAGCTCAGCCCTGCT...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGTTGGTCGGAGAGGGGTaGAGCAGGGCTGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWLVGEG*SRAELW
Trigger: CCAGAGCTCAGCCCTGCTCCACCCCTCTCCGACCAA...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGGCGAGGCCTGCTGGTTaGTCGGAGAGGGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVARPAG*SERGGA
Trigger: TGCTCCACCCCTCTCCGACCAACCAGCAGGCCTCGC...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCGCGAGGCCTGCTGGTTaGTCGGAGAGGGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGARPAG*SERGGA
Trigger: TGCTCCACCCCTCTCCGACCAACCAGCAGGCCTCGC...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CACACCCACAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGGGCGGGCCAGGTCTaGTGGTGCCTGGTGCGAAAT +
Preference number: 4 (lower is better)
Translates to: HTHRGRLGETGCAQWKQLGAGQV*WCLVRN
Trigger: ATTTCGCACCAGGCACCACCAGACCTGGCCCGCCCC...CAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTGTGGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAGAAGGTGAGGGGCTGTaGAGGGCTCCGAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGEGEGL*RAPRGQ
Trigger: CTGACCCCTCGGAGCCCTCCACAGCCCCTCACCTTC...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGGGCCCAGTTGTGGCATaGACTGGGCGAGCTCTAAGG +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWEGPVVA*TGRALR
Trigger: CCTTAGAGCTCGCCCAGTCCATGCCACAACTGGGCC...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GGGCGAGCTCTAAGGACTGACAGTTCAGTTTCTGTCTCTATCGAGGGTTTTGGGCTTGGCACCAGGCGATaGGGAGCGGGAGGCCGGACG +
Preference number: 4 (lower is better)
Translates to: GRALRTDSSVSVSIEGFGLGTRR*GAGGRT
Trigger: CGTCCGGCCTCCCGCTCCTCATCGCCTGGTGCCAAG...CCCAAAACCCTCGATAGAGACAGAAACTGAACTGTCAGTCCTTAGAGCTCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp TTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGGGGTGCCACGTGAGATaGGGGCTGCGGCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: FYLWVTLTGEPGLTKPTVGCHVR*GLRRGA
Trigger: AGCCCCTCGCCGCAGCCCTCATCTCACGTGGCACCC...CACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp TGCACATGCTTGAGATTCTCCACCGCTTTACGGAAAAGCACTCTGGCTGCTAGGGGGTGCCACGTGAGATaGGGGCTGCGGCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: CTCLRFSTALRKSTLAARGCHVR*GLRRGA
Trigger: AGCCCCTCGCCGCAGCCCTCATCTCACGTGGCACCC...CCTAGCAGCCAGAGTGCTTTTCCGTAAAGCGGTGGAGAATCTCAAGCATGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp CGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTTCCTGGGGTGCCACGTaGGATGAGGGCTGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: RGFWVSSACKLGSWVTFLSWGAT*DEGCGE
Trigger: CTCGCCGCAGCCCTCATCTCACGTGGCACCCCAGGA...AAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGTGTTCAGGGCATCCATaGTCACGGCAGAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWECSGHP*SRQSQP
Trigger: TGGCTGGCTCTGCCGTGATCATGGATGCCCTGAACA...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp CACACCCACAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGACCATGGGCAGCTCGTaGGCAGATCGCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: HTHRGRLGETGCAQWKQLTMGSS*ADRWEH
Trigger: GTGCTCCCAGCGATCTGCTCACGAGCTGCCCATGGT...CAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTGTGGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp CCTAGCCTCGAGCCTAGGAGACCCAAGGTTAAGATGCGCTGGGTCACCGAGCACGCCCACAGTGGGCACTaGGTGGCCATGACTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PSLEPRRPKVKMRWVTEHAHSGH*VAMTFF
Trigger: GAAGAAAGTCATGGCCACTCAGTGCCCACTGTGGGC...GTGCTCGGTGACCCAGCGCATCTTAACCTTGGGTCTCCTAGGCTCGAGGCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGGGCAGTGCCCCAGTCTaGACGCAGCCTCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVGSAPV*TQPLSA
Trigger: TGCAGAGAGAGGCTGCGTTCAGACTGGGGCACTGCC...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
CDS-3UTR GCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGGCGGAGGGGCCCCACTaGCTGGATCAGTTCGTGGGA +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMAEGPH*LDQFVG
Trigger: TCCCACGAACTGATCCAGGCAGTGGGGCCCCTCCGC...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR GCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCGCCTCGGCGCACGAATaGCTCCGCTTGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFASAHE*LRLAPG
Trigger: GCCTGGTGCCAAGCGGAGGCATTCGTGCGCCGAGGC...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAGCCTCGGCGCACGAATaGCTCCGCTTGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRASAHE*LRLAPG
Trigger: GCCTGGTGCCAAGCGGAGGCATTCGTGCGCCGAGGC...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGAGCCCCGTGCGGAACTaGTGGCAGGGAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVSPVRN*WQGAMV
Trigger: CACCATGGCTCCCTGCCAGCAGTTCCGCACGGGGCT...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGATCACAGGCGAGGCCTaGTGGTTGGTCGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVITGEA*WLVGEG
Trigger: CCCCTCTCCGACCAACCAGCAGGCCTCGCCTGTGAT...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGCGGAGGGGATGGCAGTaGCCCAGTCTGAACGCAGCC +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMRRGWQ*PSLNAA
Trigger: GGCTGCGTTCAGACTGGGGCACTGCCATCCCCTCCG...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
CDS-3UTR GCA 90 bp TGCACATGCTTGAGATTCTCCACCGCTTTACGGAAAAGCACTCTGGCTGCTAGGGTCTTCTCTACCGCGTaGCCGCGGGGCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: CTCLRFSTALRKSTLAARVFSTA*PRGCPG
Trigger: GCCAGGGCAGCCCCGCGGGCACGCGGTAGAGAAGAC...CCTAGCAGCCAGAGTGCTTTTCCGTAAAGCGGTGGAGAATCTCAAGCATGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609943.5
CDS-3UTR CCA 90 bp GGGCGAGCTCTAAGGACTGACAGTTCAGTTTCTGTCTCTATCGAGGGTTTTGGGCAGGCCGGCCTTGGATaGGGCGGCAGACACCGGCGA +
Preference number: 4 (lower is better)
Translates to: GRALRTDSSVSVSIEGFGQAGLG*GGRHRR
Trigger: TCGCCGGTGTCTGCCGCCCCATCCAAGGCCGGCCTG...CCCAAAACCCTCGATAGAGACAGAAACTGAACTGTCAGTCCTTAGAGCTCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTAGAGGCAGGCCGGCCTTaGATGGGGCGGCAGACACCG +
Preference number: 4 (lower is better)
Translates to: GTGAVSVTWKNERKGWGLEAGRP*MGRQTP
Trigger: CGGTGTCTGCCGCCCCATCCAAGGCCGGCCTGCCTC...TAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGGCGGCTTGGGCCAAGTaGGCGGAACCAGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMAAWAK*AEPAGW
Trigger: CCATCCTGCTGGTTCCGCCCACTTGGCCCAAGCCGC...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGACTCCCCAGGCCTCCATaGGTGGGGCTGCAGATCAGA +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGLPRPP*VGLQIR
Trigger: TCTGATCTGCAGCCCCACCCATGGAGGCCTGGGGAG...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGCTGGCAGGGAGCCATaGTGGCCACGAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKAGREP*WPRGRR
Trigger: CCTCCTGCCTCGTGGCCACCATGGCTCCCTGCCAGC...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCGCTGGCAGGGAGCCATaGTGGCCACGAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFAGREP*WPRGRR
Trigger: CCTCCTGCCTCGTGGCCACCATGGCTCCCTGCCAGC...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACGCTGGCAGGGAGCCATaGTGGCCACGAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDAGREP*WPRGRR
Trigger: CCTCCTGCCTCGTGGCCACCATGGCTCCCTGCCAGC...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGCCCGTGCGGAACTGCTaGCAGGGAGCCATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKPVRNC*QGAMVA
Trigger: GGCCACCATGGCTCCCTGCCAGCAGTTCCGCACGGG...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCGATAGCCCAGCAGGCTaGGGCTCAGGCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGDSPAG*GSGSCS
Trigger: GGAGCAAGAGCCTGAGCCCCAGCCTGCTGGGCTATC...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGGATAGCCCAGCAGGCTaGGGCTCAGGCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVDSPAG*GSGSCS
Trigger: GGAGCAAGAGCCTGAGCCCCAGCCTGCTGGGCTATC...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGTTGGTCGGAGAGGGGTaGAGCAGGGCTGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVLVGEG*SRAELW
Trigger: CCAGAGCTCAGCCCTGCTCCACCCCTCTCCGACCAA...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GCATCCAGGTTGTACAGCTGCAGCAGACAGGTGCTTGCTCTCTGCAGCCTGGGTATGTGCTGGAACTCCTaGTGGCTTCCGCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: ASRLYSCSRQVLALCSLGMCWNS*WLPQRS
Trigger: GCTGCGCTGCGGAAGCCACCAGGAGTTCCAGCACAT...ACCCAGGCTGCAGAGAGCAAGCACCTGTCTGCTGCAGCTGTACAACCTGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGCGGGCCAGGTCTGGTaGTGCCTGGTGCGAAATTCT +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWAGQVW*CLVRNS
Trigger: AGAATTTCGCACCAGGCACCACCAGACCTGGCCCGC...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCCCGGGGGTCCGTTTTTaGCGGCTCTTTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGPGVRF*RLFGSW
Trigger: CCACGAGCCAAAGAGCCGCCAAAAACGGACCCCCGG...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GAACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGGCTGTGGCCCAGTTGTaGCATGGACTGGGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: EQLAKTAPGLGALVSLLKAVAQL*HGLGEL
Trigger: GAGCTCGCCCAGTCCATGCCACAACTGGGCCACAGC...CTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGGCCTCTCTCTGCATCTaGAGGGCACGGGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVASLCI*RARGLG
Trigger: GCCAAGTCCCCGTGCCCTCCAGATGCAGAGAGAGGC...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609507.1
ENST00000609943.5
CDS-3UTR TCA 90 bp GAACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGCAGCTCGTAAGAGCCTaGCTGACTGGACAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: EQLAKTAPGLGALVSLLKQLVRA*LTGQRP
Trigger: TGGCCGCTGTCCAGTCAGTCAGGCTCTTACGAGCTG...CTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGACTCCAGTTGGAGCTTTaGCAGCCCCTCGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGLQLEL*QPLGCL
Trigger: AAGGCAGCCGAGGGGCTGTCAAAGCTCCAACTGGAG...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGACCATGGGCAGCTCGTaGGCAGATCGCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVTMGSS*ADRWEH
Trigger: GTGCTCCCAGCGATCTGCTCACGAGCTGCCCATGGT...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGCTGCTGGTTGGTGGGTaGGTAGTGGATCACAGGCGA +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWLLVGG*VVDHRR
Trigger: TCGCCTGTGATCCACTACTCACCCACCAACCAGCAG...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGGGTCCACAGACCCCATaGTGCGGAGGGGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVGPQTP*CGGDGS
Trigger: ACTGCCATCCCCTCCGCATCATGGGGTCTGTGGACC...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
CDS-3UTR GCA 90 bp ATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCGCTCGTCTTGGGGGCTaGCCCCAGGCTCGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: IQPFSSILVETHLQKHLGARLGG*PQARGL
Trigger: CAGGCCACGAGCCTGGGGGCAGCCCCCAAGACGAGC...GCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAGCGCTCAGAAACTTCTaGGGCCCTACCCTATCCGGC +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGALRNF*GPTLSG
Trigger: GCCGGATAGGGTAGGGCCGCAGAAGTTTCTGAGCGC...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR GCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACGCGGAGGGGCCCCACTaGCTGGATCAGTTCGTGGGA +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDAEGPH*LDQFVG
Trigger: TCCCACGAACTGATCCAGGCAGTGGGGCCCCTCCGC...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR GCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGAGCCCCGTGCGGAACTaGTGGCAGGGAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKSPVRN*WQGAMV
Trigger: CACCATGGCTCCCTGCCAGCAGTTCCGCACGGGGCT...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGCCCCGTGCGGAACTaGTGGCAGGGAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDSPVRN*WQGAMV
Trigger: CACCATGGCTCCCTGCCAGCAGTTCCGCACGGGGCT...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTGGGGCTCAGGCTCTTaGTCCGCTGGTAGAGTACGG +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGWGSGS*SAGRVR
Trigger: CCGTACTCTACCAGCGGAGCAAGAGCCTGAGCCCCA...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp TGCTTTGGTTCCACGAAACGTAATGCCCTAGCCTCGAGCCTAGGAGACCCAAGGATCACAGGCGAGGCCTaGTGGTTGGTCGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: CFGSTKRNALASSLGDPRITGEA*WLVGEG
Trigger: CCCCTCTCCGACCAACCAGCAGGCCTCGCCTGTGAT...CCTTGGGTCTCCTAGGCTCGAGGCTAGGGCATTACGTTTCGTGGAACCAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAGGCCAGGTCTGGTGGTaGCTGGTGCGAAATTCTCGC +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGGQVWW*LVRNSR
Trigger: GCGAGAATTTCGCACCAGGCACCACCAGACCTGGCC...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGCTAGGGGAGACTGGGTaGGCTCAGTGGAAACAGTTG +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWELGETG*AQWKQL
Trigger: CAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAG...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACCGGAGGGGATGGCAGTaGCCCAGTCTGAACGCAGCC +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDRRGWQ*PSLNAA
Trigger: GGCTGCGTTCAGACTGGGGCACTGCCATCCCCTCCG...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAGTCAAGCTCGTCTTaGGGGCTGCCCCCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMKSSSS*GLPPGS
Trigger: CGAGCCTGGGGGCAGCCCCCAAGACGAGCTTGACTT...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000610033.5
CDS-3UTR CCA 90 bp TGCTTTGGTTCCACGAAACGTAATGCCCTAGCCTCGAGCCTAGGAGACCCAAGGAAGTCAAGCTCGTCTTaGGGGCTGCCCCCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: CFGSTKRNALASSLGDPRKSSSS*GLPPGS
Trigger: CGAGCCTGGGGGCAGCCCCCAAGACGAGCTTGACTT...CCTTGGGTCTCCTAGGCTCGAGGCTAGGGCATTACGTTTCGTGGAACCAAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp GGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAAAAGGGGCCCCACTGCCTaGATCAGTTCGTGGGACGGA +
Preference number: 4 (lower is better)
Translates to: GRLGETGCAQWKQLGGRKRGPTA*ISSWDG
Trigger: TCCGTCCCACGAACTGATCCAGGCAGTGGGGCCCCT...TTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGACACAAGGCGAGTCCGTaGCGAGGCTGTTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGHKASP*RGCSGH
Trigger: ATGCCCTGAACAGCCTCGCCACGGACTCGCCTTGTG...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTCAGGCCGGCCTTGGATaGGGCGGCAGACACCGGCGA +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFQAGLG*GGRHRR
Trigger: TCGCCGGTGTCTGCCGCCCCATCCAAGGCCGGCCTG...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACGCGGCTTGGGCCAAGTaGGCGGAACCAGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDAAWAK*AEPAGW
Trigger: CCATCCTGCTGGTTCCGCCCACTTGGCCCAAGCCGC...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCGCGGCTTGGGCCAAGTaGGCGGAACCAGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFAAWAK*AEPAGW
Trigger: CCATCCTGCTGGTTCCGCCCACTTGGCCCAAGCCGC...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGCAGGCACCAGCGGCTTaGGCCAAGTGGGCGGAACCA +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKQAPAA*AKWAEP
Trigger: TGGTTCCGCCCACTTGGCCCAAGCCGCTGGTGCCTG...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACCAGGCACCAGCGGCTTaGGCCAAGTGGGCGGAACCA +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDQAPAA*AKWAEP
Trigger: TGGTTCCGCCCACTTGGCCCAAGCCGCTGGTGCCTG...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCCTGGGATGCTGCAGATaGGAATGGCAGGCACCAGCG +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGLGCCR*EWQAPA
Trigger: CGCTGGTGCCTGCCATTCCCATCTGCAGCATCCCAG...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGCTCCCCAGGCCTCCATaGGTGGGGCTGCAGATCAGA +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMLPRPP*VGLQIR
Trigger: TCTGATCTGCAGCCCCACCCATGGAGGCCTGGGGAG...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGTAGAGTACGGCCGCTaGGTTCTGTTGCTGGTAGCG +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWVEYGR*VLLLVA
Trigger: CGCTACCAGCAACAGAACCCAGCGGCCGTACTCTAC...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCGCTGAGCTCTGGCCCTaGGAGCCGGCGTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: IQPFSSILVETHLQKHLGAELWP*EPACTS
Trigger: GCTGGTGCACGCCGGCTCCCAGGGCCAGAGCTCAGC...GCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGCTGGAACTCCTGGTaGCTTCCGCAGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVCWNSW*LPQRSC
Trigger: GCAGCTGCGCTGCGGAAGCCACCAGGAGTTCCAGCA...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCGGGGCGGGCCAGGTCTaGTGGTGCCTGGTGCGAAAT +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFGAGQV*WCLVRN
Trigger: ATTTCGCACCAGGCACCACCAGACCTGGCCCGCCCC...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAGGGGCGGGCCAGGTCTaGTGGTGCCTGGTGCGAAAT +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRGAGQV*WCLVRN
Trigger: ATTTCGCACCAGGCACCACCAGACCTGGCCCGCCCC...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCGAAGGTGAGGGGCTGTaGAGGGCTCCGAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFEGEGL*RAPRGQ
Trigger: CTGACCCCTCGGAGCCCTCCACAGCCCCTCACCTTC...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CCTAGCCTCGAGCCTAGGAGACCCAAGGTTAAGATGCGCTGGGTCACCGAGCACCTTCAGCCTGTAAGCTaGGCTCTTGGGTCACGTTCC +
Preference number: 4 (lower is better)
Translates to: PSLEPRRPKVKMRWVTEHLQPVS*ALGSRS
Trigger: GGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAG...GTGCTCGGTGACCCAGCGCATCTTAACCTTGGGTCTCCTAGGCTCGAGGCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCGGCCCAGTTGTGGCATaGACTGGGCGAGCTCTAAGG +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGGPVVA*TGRALR
Trigger: CCTTAGAGCTCGCCCAGTCCATGCCACAACTGGGCC...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGGCCTCTCTCTGCATCTaGAGGGCACGGGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVASLCI*RARGLG
Trigger: GCCAAGTCCCCGTGCCCTCCAGATGCAGAGAGAGGC...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609507.1
ENST00000609943.5
CDS-3UTR TCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAGGGGGCTGTATGGCTTaGGGCCATAGTCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGGGCMA*GHSPGH
Trigger: ATGTCCTGGACTATGGCCTCAAGCCATACAGCCCCC...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR TCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTCCTGGGGTGCCACGTaGGATGAGGGCTGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFSWGAT*DEGCGE
Trigger: CTCGCCGCAGCCCTCATCTCACGTGGCACCCCAGGA...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR TCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGATGTTCAGGGCATCCATaGTCACGGCAGAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGCSGHP*SRQSQP
Trigger: TGGCTGGCTCTGCCGTGATCATGGATGCCCTGAACA...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACACCATGGGCAGCTCGTaGGCAGATCGCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDTMGSS*ADRWEH
Trigger: GTGCTCCCAGCGATCTGCTCACGAGCTGCCCATGGT...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp TGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGGGCACTGAGCTGCTGGTTGGTGGGTaGGTAGTGGATCACAGGCGA +
Preference number: 4 (lower is better)
Translates to: WVTLTGEPGLTKPTVGTELLVGG*VVDHRR
Trigger: TCGCCTGTGATCCACTACTCACCCACCAACCAGCAG...CTCAGTGCCCACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCCTGCTGGTTGGTGGGTaGGTAGTGGATCACAGGCGA +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGLLVGG*VVDHRR
Trigger: TCGCCTGTGATCCACTACTCACCCACCAACCAGCAG...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGTTAGTGCCCATACATTaGTCCGCGTGTGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWLVPIH*SACGLR
Trigger: CCGGAGTCCACACGCGGATCAATGTATGGGCACTAA...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCCCAAGACTGGCTCACTaGGGCGTCTTGGCTACTGGA +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGPRLAH*GVLATG
Trigger: TCCAGTAGCCAAGACGCCTCAGTGAGCCAGTCTTGG...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAGACATCATCGGGGTATaGGGGTCCGGAGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRDIIGV*GSGGWA
Trigger: AGCCCACCCTCCGGACCCGCATACCCCGATGATGTC...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR GCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGACATCATCGGGGTATaGGGGTCCGGAGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKDIIGV*GSGGWA
Trigger: AGCCCACCCTCCGGACCCGCATACCCCGATGATGTC...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR GCA 90 bp GTGCGGATAGGTCTTCAGGGGCAGAAGGGATCTTTAAATAGGTTCAGGTCAAATCAGGCCCGAGGCCCCTaGTGGCTTGGCCGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: VRIGLQGQKGSLNRFRSNQARGP*WLGRAQ
Trigger: CTGAGCGCGGCCAAGCCAGCAGGGGCCTCGGGCCTG...ATTTGACCTGAACCTATTTAAAGATCCCTTCTGCCCCTGAAGACCTATCCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGGCCTCGGCGCACGAATaGCTCCGCTTGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKASAHE*LRLAPG
Trigger: GCCTGGTGCCAAGCGGAGGCATTCGTGCGCCGAGGC...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGTGGGGCTCAGGCTCTTaGTCCGCTGGTAGAGTACGG +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMWGSGS*SAGRVR
Trigger: CCGTACTCTACCAGCGGAGCAAGAGCCTGAGCCCCA...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp GGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAAATGGGGCTCAGGCTCTTaGTCCGCTGGTAGAGTACGG +
Preference number: 4 (lower is better)
Translates to: GRLGETGCAQWKQLGGRKWGSGS*SAGRVR
Trigger: CCGTACTCTACCAGCGGAGCAAGAGCCTGAGCCCCA...TTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCATCACAGGCGAGGCCTaGTGGTTGGTCGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFITGEA*WLVGEG
Trigger: CCCCTCTCCGACCAACCAGCAGGCCTCGCCTGTGAT...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGAAGTCAAGCTCGTCTTaGGGGCTGCCCCCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKKSSSS*GLPPGS
Trigger: CGAGCCTGGGGGCAGCCCCCAAGACGAGCTTGACTT...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000610033.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGGTCCGGAGGGTGGGCTaGCGACCTTATGTGCATTCG +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMVRRVG*RPYVHS
Trigger: CGAATGCACATAAGGTCGCCAGCCCACCCTCCGGAC...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAGGCCCCTGCTGGCTTaGCCGCGCTCAGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMRPLLA*PRSETS
Trigger: AGAAGTTTCTGAGCGCGGCCAAGCCAGCAGGGGCCT...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR CCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGGGCCCCACTGCCTaGATCAGTTCGTGGGACGGA +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRRGPTA*ISSWDG
Trigger: TCCGTCCCACGAACTGATCCAGGCAGTGGGGCCCCT...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCAGGGGCCCCACTGCCTaGATCAGTTCGTGGGACGGA +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFRGPTA*ISSWDG
Trigger: TCCGTCCCACGAACTGATCCAGGCAGTGGGGCCCCT...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR CCA 90 bp AGGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAACGGGCCCGCCGTTATTaGGCGAGACGCAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: RSSENKSLTTHSWLFPSERARRY*ARRRAR
Trigger: CCTCGCCCTGCGTCTCGCCCAATAACGGCGGGCCCG...TTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CCTAGCCTCGAGCCTAGGAGACCCAAGGTTAAGATGCGCTGGGTCACCGAGCACTGTCCTCGGCGAGGCTaGTTCGAGGTGACATTATTG +
Preference number: 4 (lower is better)
Translates to: PSLEPRRPKVKMRWVTEHCPRRG*FEVTLL
Trigger: CAATAATGTCACCTCGAACCAGCCTCGCCGAGGACA...GTGCTCGGTGACCCAGCGCATCTTAACCTTGGGTCTCCTAGGCTCGAGGCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGACGAATGCCTCCGCTTaGCACCAGGCGATGAGGAGC +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVTNASA*HQAMRS
Trigger: GCTCCTCATCGCCTGGTGCCAAGCGGAGGCATTCGT...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp TGCACATGCTTGAGATTCTCCACCGCTTTACGGAAAAGCACTCTGGCTGCTAGGCAGGCACCAGCGGCTTaGGCCAAGTGGGCGGAACCA +
Preference number: 4 (lower is better)
Translates to: CTCLRFSTALRKSTLAARQAPAA*AKWAEP
Trigger: TGGTTCCGCCCACTTGGCCCAAGCCGCTGGTGCCTG...CCTAGCAGCCAGAGTGCTTTTCCGTAAAGCGGTGGAGAATCTCAAGCATGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGTGCTGCAGATGGGAATaGCAGGCACCAGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMCCRWE*QAPAAW
Trigger: CCAAGCCGCTGGTGCCTGCCATTCCCATCTGCAGCA...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGCTGCAGATGGGAATaGCAGGCACCAGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVCCRWE*QAPAAW
Trigger: CCAAGCCGCTGGTGCCTGCCATTCCCATCTGCAGCA...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGCAGCGGCCACTCAAGTaGAGGGAGGGATGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMQRPLK*REGCSH
Trigger: GTGACTGCATCCCTCCCTCCACTTGAGTGGCCGCTG...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGCTTGATGGCTGGGACTaGGTGGTAGGTAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWELDGWD*VVGKVL
Trigger: CAGCACTTTACCTACCACCCAGTCCCAGCCATCAAG...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp AGGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAAGCAGGGCTGAGCTCTaGCCCTGGGAGCCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: RSSENKSLTTHSWLFPSESRAEL*PWEPAC
Trigger: GCACGCCGGCTCCCAGGGCCAGAGCTCAGCCCTGCT...TTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTGGTCGGAGAGGGGTaGAGCAGGGCTGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFLVGEG*SRAELW
Trigger: CCAGAGCTCAGCCCTGCTCCACCCCTCTCCGACCAA...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGAGCGCAGCTGCTGGTTaGTGGGTGAGTAGTGGATCA +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWSAAAG*WVSSGS
Trigger: TGATCCACTACTCACCCACCAACCAGCAGCTGCGCT...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTGCTGGAACTCCTGGTaGCTTCCGCAGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFCWNSW*LPQRSC
Trigger: GCAGCTGCGCTGCGGAAGCCACCAGGAGTTCCAGCA...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGATGTGCTGGAACTCCTaGTGGCTTCCGCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVMCWNS*WLPQRS
Trigger: GCTGCGCTGCGGAAGCCACCAGGAGTTCCAGCACAT...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAAAGCGGGCCAGGTCTGGTaGTGCCTGGTGCGAAATTCT +
Preference number: 4 (lower is better)
Translates to: GRLGETGCAQWKQLGGRKAGQVW*CLVRNS
Trigger: AGAATTTCGCACCAGGCACCACCAGACCTGGCCCGC...TTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGGCGGGCCAGGTCTGGTaGTGCCTGGTGCGAAATTCT +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVAGQVW*CLVRNS
Trigger: AGAATTTCGCACCAGGCACCACCAGACCTGGCCCGC...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGACCGGGGGTCCGTTTTTaGCGGCTCTTTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRPGVRF*RLFGSW
Trigger: CCACGAGCCAAAGAGCCGCCAAAAACGGACCCCCGG...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CCTAGCCTCGAGCCTAGGAGACCCAAGGTTAAGATGCGCTGGGTCACCGAGCACGTGTGGACTCCGGGCTaGGAGATGAACATGAAAGGA +
Preference number: 4 (lower is better)
Translates to: PSLEPRRPKVKMRWVTEHVWTPG*EMNMKG
Trigger: TCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACAC...GTGCTCGGTGACCCAGCGCATCTTAACCTTGGGTCTCCTAGGCTCGAGGCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAACATTGATCCGCGTGTaGACTCCGGGCTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGTLIRV*TPGWEM
Trigger: CATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GAACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGACATTGATCCGCGTGTaGACTCCGGGCTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: EQLAKTAPGLGALVSLLKTLIRV*TPGWEM
Trigger: CATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT...CTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGCTGTGGCCCAGTTGTaGCATGGACTGGGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKAVAQL*HGLGEL
Trigger: GAGCTCGCCCAGTCCATGCCACAACTGGGCCACAGC...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAATGATGCGGAGGGGATaGCAGTGCCCCAGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGMMRRG*QCPSLN
Trigger: GTTCAGACTGGGGCACTGCCATCCCCTCCGCATCAT...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
CDS-3UTR TCA 90 bp AGTTTCTGTCTCTATCGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTCCTGGGGTGCCACGTaGGATGAGGGCTGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: SFCLYRGFWVSSACKLGSSWGAT*DEGCGE
Trigger: CTCGCCGCAGCCCTCATCTCACGTGGCACCCCAGGA...AGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCGATAGAGACAGAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCCAGCTCGTAAGAGCCTaGCTGACTGGACAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFQLVRA*LTGQRP
Trigger: TGGCCGCTGTCCAGTCAGTCAGGCTCTTACGAGCTG...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GGAAGCTTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCCTCCAGTTGGAGCTTTaGCAGCCCCTCGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: GSFYLWVTLTGEPGLTKPLQLEL*QPLGCL
Trigger: AAGGCAGCCGAGGGGCTGTCAAAGCTCCAACTGGAG...GGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGCTCCAGTTGGAGCTTTaGCAGCCCCTCGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKLQLEL*QPLGCL
Trigger: AAGGCAGCCGAGGGGCTGTCAAAGCTCCAACTGGAG...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp CTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGAGAAAGCGGGCGTCAGGGGATaGGAGCCCCGTGCGGAACTG +
Preference number: 4 (lower is better)
Translates to: LTTHSWLFPSEVNIAGEKAGVRG*EPRAEL
Trigger: CAGTTCCGCACGGGGCTCTCATCCCCTGACGCCCGC...TTTCTCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCTGTTTACCAGCACAGAGCGGTaGGCGTCCGCAAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: ALFLYLGRNPPPEALGLFTSTER*ASARDS
Trigger: GCTGTCCCTTGCGGACGCTCACCGCTCTGTGCTGGT...AAACAGCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGCTGCTGGTTGGTGGGTaGGTAGTGGATCACAGGCGA +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVLLVGG*VVDHRR
Trigger: TCGCCTGTGATCCACTACTCACCCACCAACCAGCAG...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGTTAGTGCCCATACATTaGTCCGCGTGTGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVLVPIH*SACGLR
Trigger: CCGGAGTCCACACGCGGATCAATGTATGGGCACTAA...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGATTAGTGCCCATACATTaGTCCGCGTGTGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGLVPIH*SACGLR
Trigger: CCGGAGTCCACACGCGGATCAATGTATGGGCACTAA...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGCGCTCAGAAACTTCTaGGGCCCTACCCTATCCGGC +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKALRNF*GPTLSG
Trigger: GCCGGATAGGGTAGGGCCGCAGAAGTTTCTGAGCGC...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR GCA 90 bp AGAGGGAATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCAGCCTCGGCGCACGAATaGCTCCGCTTGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: RGNSALFLYLGRNPPPEAASAHE*LRLAPG
Trigger: GCCTGGTGCCAAGCGGAGGCATTCGTGCGCCGAGGC...TGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAATTCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGAGCCCCGTGCGGAACTaGTGGCAGGGAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKSPVRN*WQGAMV
Trigger: CACCATGGCTCCCTGCCAGCAGTTCCGCACGGGGCT...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTAGCCCCGTGCGGAACTaGTGGCAGGGAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFSPVRN*WQGAMV
Trigger: CACCATGGCTCCCTGCCAGCAGTTCCGCACGGGGCT...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR GCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGTCTGGTGGTGCCTGGTaGGAAATTCTCGCAGTACAT +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWESGGAW*EILAVH
Trigger: ATGTACTGCGAGAATTTCGCACCAGGCACCACCAGA...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCGGCCAGGTCTGGTGGTaGCTGGTGCGAAATTCTCGC +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFGQVWW*LVRNSR
Trigger: GCGAGAATTTCGCACCAGGCACCACCAGACCTGGCC...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp CAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGCCTTCTATCTGGAGTaGCAAACACACCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: QRKTRGDWVRSVETVGRKAFYLE*QTHLAP
Trigger: TGGGGCCAGGTGTGTTTGGCACTCCAGATAGAAGGC...CTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTGCTCGGGGGCGTTCATaGCGCGCAGGGCGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPARGRS*RAGREG
Trigger: GCCTTCCCGCCCTGCGCGCCATGAACGCCCCCGAGC...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000610033.5
CDS-3UTR CCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACGTCCGGAGGGTGGGCTaGCGACCTTATGTGCATTCG +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDVRRVG*RPYVHS
Trigger: CGAATGCACATAAGGTCGCCAGCCCACCCTCCGGAC...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR CCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAAGCAAGGGGGCTGTATaGCTTGAGGCCATAGTCCAG +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGSKGAV*LEAIVQ
Trigger: CTGGACTATGGCCTCAAGCCATACAGCCCCCTTGCT...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR CCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGGCCTGGATCAGTTCGTaGGACGGAGTGATCTCGATC +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVAWISS*DGVISI
Trigger: GATCGAGATCACTCCGTCCCACGAACTGATCCAGGC...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR CCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAACGAATGCCTCCGCTTaGCACCAGGCGATGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRTNASA*HQAMRS
Trigger: GCTCCTCATCGCCTGGTGCCAAGCGGAGGCATTCGT...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGCACAAGGCGAGTCCGTaGCGAGGCTGTTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKHKASP*RGCSGH
Trigger: ATGCCCTGAACAGCCTCGCCACGGACTCGCCTTGTG...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGGCGGAACCAGCAGGATaGATTCTGGAGCCGAGTTTC +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVAEPAG*ILEPSF
Trigger: GAAACTCGGCTCCAGAATCCATCCTGCTGGTTCCGC...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCGCGGAACCAGCAGGATaGATTCTGGAGCCGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGAEPAG*ILEPSF
Trigger: GAAACTCGGCTCCAGAATCCATCCTGCTGGTTCCGC...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GAACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGGCGGAACCAGCAGGATaGATTCTGGAGCCGAGTTTC +
Preference number: 4 (lower is better)
Translates to: EQLAKTAPGLGALVSLLKAEPAG*ILEPSF
Trigger: GAAACTCGGCTCCAGAATCCATCCTGCTGGTTCCGC...CTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTCAGGCACCAGCGGCTTaGGCCAAGTGGGCGGAACCA +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFQAPAA*AKWAEP
Trigger: TGGTTCCGCCCACTTGGCCCAAGCCGCTGGTGCCTG...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTGCTGCAGATGGGAATaGCAGGCACCAGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFCCRWE*QAPAAW
Trigger: CCAAGCCGCTGGTGCCTGCCATTCCCATCTGCAGCA...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGACTGGGATGCTGCAGATaGGAATGGCAGGCACCAGCG +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRLGCCR*EWQAPA
Trigger: CGCTGGTGCCTGCCATTCCCATCTGCAGCATCCCAG...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTTGGTCTCCCCAGGCCTCCATaGGTGGGGCTGCAGATCAGA +
Preference number: 4 (lower is better)
Translates to: GFGFLQPVSWALGSRSFGLPRPP*VGLQIR
Trigger: TCTGATCTGCAGCCCCACCCATGGAGGCCTGGGGAG...ACCAAAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTAATCACAGTCCCGTGCGGAACTGCTaGCAGGGAGCCATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SCICDLEKRTQGLGFNHSPVRNC*QGAMVA
Trigger: GGCCACCATGGCTCCCTGCCAGCAGTTCCGCACGGG...ACTGTGATTAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGGTAGAGTACGGCCGCTaGGTTCTGTTGCTGGTAGCG +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMVEYGR*VLLLVA
Trigger: CGCTACCAGCAACAGAACCCAGCGGCCGTACTCTAC...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAAAGTAGAGTACGGCCGCTaGGTTCTGTTGCTGGTAGCG +
Preference number: 4 (lower is better)
Translates to: GRLGETGCAQWKQLGGRKVEYGR*VLLLVA
Trigger: CGCTACCAGCAACAGAACCCAGCGGCCGTACTCTAC...TTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AATGAATCCCCCGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAAGCTGAGCTCTGGCCCTaGGAGCCGGCGTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: NESPACPGVSAVHANRNKAELWP*EPACTS
Trigger: GCTGGTGCACGCCGGCTCCCAGGGCCAGAGCTCAGC...TTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCGGGGGATTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp ATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCGCGAGGCCTGCTGGTTaGTCGGAGAGGGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: IQPFSSILVETHLQKHLGARPAG*SERGGA
Trigger: TGCTCCACCCCTCTCCGACCAACCAGCAGGCCTCGC...GCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCGCAGCTGCTGGTTGGTaGGTGAGTAGTGGATCACAG +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGAAAGW*VSSGSQ
Trigger: CTGTGATCCACTACTCACCCACCAACCAGCAGCTGC...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGCGCAGCTGCTGGTTaGTGGGTGAGTAGTGGATCA +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVSAAAG*WVSSGS
Trigger: TGATCCACTACTCACCCACCAACCAGCAGCTGCGCT...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTATGCTGGAACTCCTGGTaGCTTCCGCAGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GTGAVSVTWKNERKGWGLCWNSW*LPQRSC
Trigger: GCAGCTGCGCTGCGGAAGCCACCAGGAGTTCCAGCA...TAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TGCACATGCTTGAGATTCTCCACCGCTTTACGGAAAAGCACTCTGGCTGCTAGGTGCTGGAACTCCTGGTaGCTTCCGCAGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CTCLRFSTALRKSTLAARCWNSW*LPQRSC
Trigger: GCAGCTGCGCTGCGGAAGCCACCAGGAGTTCCAGCA...CCTAGCAGCCAGAGTGCTTTTCCGTAAAGCGGTGGAGAATCTCAAGCATGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGAGGTCTGGTGGTGCCTaGTGCGAAATTCTCGCAGTA +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWRSGGA*CEILAV
Trigger: TACTGCGAGAATTTCGCACCAGGCACCACCAGACCT...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAGCGGGCCAGGTCTGGTaGTGCCTGGTGCGAAATTCT +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRAGQVW*CLVRNS
Trigger: AGAATTTCGCACCAGGCACCACCAGACCTGGCCCGC...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCTGTTTGGGGCGGGCCAGGTCTaGTGGTGCCTGGTGCGAAAT +
Preference number: 4 (lower is better)
Translates to: ALFLYLGRNPPPEALGLFGAGQV*WCLVRN
Trigger: ATTTCGCACCAGGCACCACCAGACCTGGCCCGCCCC...AAACAGCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTGGGGCGGGCCAGGTCTaGTGGTGCCTGGTGCGAAAT +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFGAGQV*WCLVRN
Trigger: ATTTCGCACCAGGCACCACCAGACCTGGCCCGCCCC...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp TTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGCCGGGGGTCCGTTTTTaGCGGCTCTTTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: FYLWVTLTGEPGLTKPTVPGVRF*RLFGSW
Trigger: CCACGAGCCAAAGAGCCGCCAAAAACGGACCCCCGG...CACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGGTAATACTTCCTTTTaGTCACTGACCGGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWGNTSF*SLTGGP
Trigger: CGGACCCCCGGTCAGTGACCAAAAGGAAGTATTACC...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTGAAGGTGAGGGGCTGTaGAGGGCTCCGAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFEGEGL*RAPRGQ
Trigger: CTGACCCCTCGGAGCCCTCCACAGCCCCTCACCTTC...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGACATTGATCCGCGTGTaGACTCCGGGCTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMTLIRV*TPGWEM
Trigger: CATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGACATTGATCCGCGTGTaGACTCCGGGCTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVTLIRV*TPGWEM
Trigger: CATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GAACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGCTTCAGCCTGTAAGCTaGGCTCTTGGGTCACGTTCC +
Preference number: 4 (lower is better)
Translates to: EQLAKTAPGLGALVSLLKLQPVS*ALGSRS
Trigger: GGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAG...CTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAAAAGTGCCAAACACACCTaGCCCCACTCCCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GRLGETGCAQWKQLGGRKSAKHT*PHSQEA
Trigger: AGCTTCCTGGGAGTGGGGCCAGGTGTGTTTGGCACT...TTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGATGATGCGGAGGGGATaGCAGTGCCCCAGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMMMRRG*QCPSLN
Trigger: GTTCAGACTGGGGCACTGCCATCCCCTCCGCATCAT...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
3UTR CAA 72 bp GCCCCACTCCCAGGAAGCTTTTACCTCTGGGTAACCTaGACGGGAGAGCCAGGACTTACAAAGCCCACAGTG +
Preference number: 4 (lower is better)
Translates to: APLPGSFYLWVT*TGEPGLTKPTV
Trigger: CACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCCTGGGAGTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACGGGGGCTGTATGGCTTaGGGCCATAGTCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDGGCMA*GHSPGH
Trigger: ATGTCCTGGACTATGGCCTCAAGCCATACAGCCCCC...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR TCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCGAGGCTGGTTCGAGGTaGCATTATTGGCGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGEAGSR*HYWRGS
Trigger: AGAACCTCGCCAATAATGTCACCTCGAACCAGCCTC...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp CTGTCTCATGTAGAATGTGCTTTTGGTCAGCAGGTGCTTACTATTTGGACGGAACTTGGCACCAGGCGATaGGGAGCGGGAGGCCGGACG +
Preference number: 4 (lower is better)
Translates to: LSHVECAFGQQVLTIWTELGTRR*GAGGRT
Trigger: CGTCCGGCCTCCCGCTCCTCATCGCCTGGTGCCAAG...TTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAGCACATTCTACATGAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGATGTTCAGGGCATCCATaGTCACGGCAGAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRCSGHP*SRQSQP
Trigger: TGGCTGGCTCTGCCGTGATCATGGATGCCCTGAACA...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GGGCGAGCTCTAAGGACTGACAGTTCAGTTTCTGTCTCTATCGAGGGTTTTGGGCAGCTCGTAAGAGCCTaGCTGACTGGACAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GRALRTDSSVSVSIEGFGQLVRA*LTGQRP
Trigger: TGGCCGCTGTCCAGTCAGTCAGGCTCTTACGAGCTG...CCCAAAACCCTCGATAGAGACAGAAACTGAACTGTCAGTCCTTAGAGCTCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGGTCCCAATGAAGATCTaGAGTCCCAGAGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWEVPMKI*SPRGLF
Trigger: AAACAAGCCTCTGGGACTTCAGATCTTCATTGGGAC...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCCTGGACTCTGGGATGTaGACTCGGAAAACCAGTCTC +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGLDSGM*TRKTSL
Trigger: GAGACTGGTTTTCCGAGTTCACATCCCAGAGTCCAG...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTGCGGGCGTCAGGGGATaGGAGCCCCGTGCGGAACTG +
Preference number: 4 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGIAGVRG*EPRAEL
Trigger: CAGTTCCGCACGGGGCTCTCATCCCCTGACGCCCGC...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAACAGCGGGGCGGCCATaGGGGCCGGCTGCTGATAGC +
Preference number: 4 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGTAGRP*GPAADS
Trigger: GCTATCAGCAGCCGGCCCTCATGGCCGCCCCGCTGT...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp CTGTCTCATGTAGAATGTGCTTTTGGTCAGCAGGTGCTTACTATTTGGACGGAAACAGCGGGGCGGCCATaGGGGCCGGCTGCTGATAGC +
Preference number: 4 (lower is better)
Translates to: LSHVECAFGQQVLTIWTETAGRP*GPAADS
Trigger: GCTATCAGCAGCCGGCCCTCATGGCCGCCCCGCTGT...TTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAGCACATTCTACATGAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGCCTCTGACCTTGACTaGCCGGGGGCGGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGASDLD*PGAGQV
Trigger: GACCTGGCCCGCCCCCGGTCAGTCAAGGTCAGAGGC...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTGCCTCTGACCTTGACTaGCCGGGGGCGGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPASDLD*PGAGQV
Trigger: GACCTGGCCCGCCCCCGGTCAGTCAAGGTCAGAGGC...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR TCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGCCTAGCCAGGTCGAGTaGGAACAAATCACTCACCAC +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVPSQVE*EQITHH
Trigger: GTGGTGAGTGATTTGTTCTCACTCGACCTGGCTAGG...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp CAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGCCTAGCCAGGTCGAGTaGGAACAAATCACTCACCAC +
Preference number: 4 (lower is better)
Translates to: QRKTRGDWVRSVETVGRKPSQVE*EQITHH
Trigger: GTGGTGAGTGATTTGTTCTCACTCGACCTGGCTAGG...CTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGACGCGTACAGGAGGTTaGGCTACCAGGAGGCCGTTT +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKTRTGG*ATRRPF
Trigger: AAACGGCCTCCTGGTAGCTCAACCTCCTGTACGCGT...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCGGCCAGAGGGGTGAGTaGGGTTCTTTGACAAGATGT +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGGQRGE*GSLTRC
Trigger: ACATCTTGTCAAAGAACCTCACTCACCCCTCTGGCC...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTGGCAGTGCCCCAGTCTaGACGCAGCCTCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFGSAPV*TQPLSA
Trigger: TGCAGAGAGAGGCTGCGTTCAGACTGGGGCACTGCC...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414705.5
ENST00000609507.1
CDS-3UTR GCA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGCAGGCCCGAGGCCCCTaGTGGCTTGGCCGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLQARGP*WLGRAQ
Trigger: CTGAGCGCGGCCAAGCCAGCAGGGGCCTCGGGCCTG...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAATGCAGTCACTGGGATaGTGCAGATGGGAATGGCAG +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGMQSLG*CRWEWQ
Trigger: CTGCCATTCCCATCTGCAGCATCCCAGTGACTGCAT...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTATCACAGGCGAGGCCTaGTGGTTGGTCGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFITGEA*WLVGEG
Trigger: CCCCTCTCCGACCAACCAGCAGGCCTCGCCTGTGAT...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR GCA 90 bp GGGCGAGCTCTAAGGACTGACAGTTCAGTTTCTGTCTCTATCGAGGGTTTTGGGGGCCAGGTCTGGTGGTaGCTGGTGCGAAATTCTCGC +
Preference number: 4 (lower is better)
Translates to: GRALRTDSSVSVSIEGFGGQVWW*LVRNSR
Trigger: GCGAGAATTTCGCACCAGGCACCACCAGACCTGGCC...CCCAAAACCCTCGATAGAGACAGAAACTGAACTGTCAGTCCTTAGAGCTCGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp ACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGCAAGCTCCAGGGCTAGGTaGCCTGGTCAGCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: TARQDSSRARCPGQPFKASSRAR*PGQPFK
Trigger: TTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCT...TGCTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGTCTTCTGAGGCCTTCTaGCTACAGACTGTACAGACT +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWESSEAF*LQTVQT
Trigger: AGTCTGTACAGTCTGTAGGCAGAAGGCCTCAGAAGA...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGACCCAAGGTTAAGATaGGCTGGGTCACCGAGCACC +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKDPRLR*AGSPST
Trigger: GGTGCTCGGTGACCCAGCGCATCTTAACCTTGGGTC...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp TGCACATGCTTGAGATTCTCCACCGCTTTACGGAAAAGCACTCTGGCTGCTAGGAGGCCCCTGCTGGCTTaGCCGCGCTCAGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: CTCLRFSTALRKSTLAARRPLLA*PRSETS
Trigger: AGAAGTTTCTGAGCGCGGCCAAGCCAGCAGGGGCCT...CCTAGCAGCCAGAGTGCTTTTCCGTAAAGCGGTGGAGAATCTCAAGCATGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAAGAACGGGCCCGCCGTTATTaGGCGAGACGCAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: CPGVSAVHANRNKHICQERARRY*ARRRAR
Trigger: CCTCGCCCTGCGTCTCGCCCAATAACGGCGGGCCCG...TTCTTGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GAACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGTGTCCTCGGCGAGGCTaGTTCGAGGTGACATTATTG +
Preference number: 4 (lower is better)
Translates to: EQLAKTAPGLGALVSLLKCPRRG*FEVTLL
Trigger: CAATAATGTCACCTCGAACCAGCCTCGCCGAGGACA...CTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGTGTCCTCGGCGAGGCTaGTTCGAGGTGACATTATTG +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVCPRRG*FEVTLL
Trigger: CAATAATGTCACCTCGAACCAGCCTCGCCGAGGACA...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTTGGTACGAATGCCTCCGCTTaGCACCAGGCGATGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GFGFLQPVSWALGSRSFGTNASA*HQAMRS
Trigger: GCTCCTCATCGCCTGGTGCCAAGCGGAGGCATTCGT...ACCAAAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTGCGAGGGGTCAGGGCTaGTCTTCCACATCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFARGQG*SSTSWG
Trigger: CCCCCAAGATGTGGAAGACCAGCCCTGACCCCTCGC...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTGAGGCAGGCCGGCCTTaGATGGGGCGGCAGACACCG +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPEAGRP*MGRQTP
Trigger: CGGTGTCTGCCGCCCCATCCAAGGCCGGCCTGCCTC...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAAAGCGGAACCAGCAGGATaGATTCTGGAGCCGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GRLGETGCAQWKQLGGRKAEPAG*ILEPSF
Trigger: GAAACTCGGCTCCAGAATCCATCCTGCTGGTTCCGC...TTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTTGGTTGCTGCAGATGGGAATaGCAGGCACCAGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GFGFLQPVSWALGSRSFGCCRWE*QAPAAW
Trigger: CCAAGCCGCTGGTGCCTGCCATTCCCATCTGCAGCA...ACCAAAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTACAGCGGCCACTCAAGTaGAGGGAGGGATGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: GTGAVSVTWKNERKGWGLQRPLK*REGCSH
Trigger: GTGACTGCATCCCTCCCTCCACTTGAGTGGCCGCTG...TAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGGCGAGCTCTAAGGACTGACAGTTCAGTTTCTGTCTCTATCGAGGGTTTTGGGCAGCGGCCACTCAAGTaGAGGGAGGGATGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: GRALRTDSSVSVSIEGFGQRPLK*REGCSH
Trigger: GTGACTGCATCCCTCCCTCCACTTGAGTGGCCGCTG...CCCAAAACCCTCGATAGAGACAGAAACTGAACTGTCAGTCCTTAGAGCTCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCCTCCGTCTTGATGGCTaGGACTGGGTGGTAGGTAAA +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGLRLDG*DWVVGK
Trigger: TTTACCTACCACCCAGTCCCAGCCATCAAGACGGAG...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTCTCCCCAGGCCTCCATaGGTGGGGCTGCAGATCAGA +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFLPRPP*VGLQIR
Trigger: TCTGATCTGCAGCCCCACCCATGGAGGCCTGGGGAG...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTCTCCCCAGGCCTCCATaGGTGGGGCTGCAGATCAGA +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFLPRPP*VGLQIR
Trigger: TCTGATCTGCAGCCCCACCCATGGAGGCCTGGGGAG...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCGTAGAGTACGGCCGCTaGGTTCTGTTGCTGGTAGCG +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFVEYGR*VLLLVA
Trigger: CGCTACCAGCAACAGAACCCAGCGGCCGTACTCTAC...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTGATAGCCCAGCAGGCTaGGGCTCAGGCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFDSPAG*GSGSCS
Trigger: GGAGCAAGAGCCTGAGCCCCAGCCTGCTGGGCTATC...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTAGCAGGGCTGAGCTCTaGCCCTGGGAGCCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGISRAEL*PWEPAC
Trigger: GCACGCCGGCTCCCAGGGCCAGAGCTCAGCCCTGCT...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTTTGGTCGGAGAGGGGTaGAGCAGGGCTGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFLVGEG*SRAELW
Trigger: CCAGAGCTCAGCCCTGCTCCACCCCTCTCCGACCAA...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTTGCTGGAACTCCTGGTaGCTTCCGCAGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFCWNSW*LPQRSC
Trigger: GCAGCTGCGCTGCGGAAGCCACCAGGAGTTCCAGCA...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTAATGTGCTGGAACTCCTaGTGGCTTCCGCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GTGAVSVTWKNERKGWGLMCWNS*WLPQRS
Trigger: GCTGCGCTGCGGAAGCCACCAGGAGTTCCAGCACAT...TAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCCAGTACATGATGTGCTaGAACTCCTGGTGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGQYMMC*NSWWLP
Trigger: CGGAAGCCACCAGGAGTTCCAGCACATCATGTACTG...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp TGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGGGCACTGAGTTTTTGGCGGCTCTTTaGCTCGTGGCATTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WVTLTGEPGLTKPTVGTEFLAAL*LVAFCC
Trigger: GCAGCAGAATGCCACGAGCCAAAGAGCCGCCAAAAA...CTCAGTGCCCACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTTTTGGCGGCTCTTTaGCTCGTGGCATTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGFLAAL*LVAFCC
Trigger: GCAGCAGAATGCCACGAGCCAAAGAGCCGCCAAAAA...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTCCGGGGGTCCGTTTTTaGCGGCTCTTTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFPGVRF*RLFGSW
Trigger: CCACGAGCCAAAGAGCCGCCAAAAACGGACCCCCGG...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGGGTAATACTTCCTTTTaGTCACTGACCGGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVGNTSF*SLTGGP
Trigger: CGGACCCCCGGTCAGTGACCAAAAGGAAGTATTACC...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCGTGTGGACTCCGGGCTaGGAGATGAACATGAAAGGA +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGVWTPG*EMNMKG
Trigger: TCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACAC...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CAAGATGTCCAGGATGCTAAGCTTGTCCCAACAGCCATAGCCTCGGTCTGCTCAACATTGATCCGCGTGTaGACTCCGGGCTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: QDVQDAKLVPTAIASVCSTLIRV*TPGWEM
Trigger: CATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT...TGAGCAGACCGAGGCTATGGCTGTTGGGACAAGCTTAGCATCCTGGACATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp CAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGAACGAACGCAAGGGCTaGGGTTTAATCACAGTGCCC +
Preference number: 4 (lower is better)
Translates to: QRKTRGDWVRSVETVGRKNERKG*GLITVP
Trigger: GGGCACTGTGATTAAACCCCAGCCCTTGCGTTCGTT...CTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAAACGAACGCAAGGGCTaGGGTTTAATCACAGTGCCC +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGNERKG*GLITVP
Trigger: GGGCACTGTGATTAAACCCCAGCCCTTGCGTTCGTT...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CAAGATGTCCAGGATGCTAAGCTTGTCCCAACAGCCATAGCCTCGGTCTGCTCAAGTGCCAAACACACCTaGCCCCACTCCCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: QDVQDAKLVPTAIASVCSSAKHT*PHSQEA
Trigger: AGCTTCCTGGGAGTGGGGCCAGGTGTGTTTGGCACT...TGAGCAGACCGAGGCTATGGCTGTTGGGACAAGCTTAGCATCCTGGACATCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTGAGGGCACGGGGACTTaGCGCGTGTTTGGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFEGTGT*RVFGKG
Trigger: CCCCTTTCCAAACACGCGCCAAGTCCCCGTGCCCTC...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609507.1
3UTR CAA 72 bp AGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATaGATCCGCGTGTGGACTCCGGGCTGGGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: SSLSESPLSAHT*IRVWTPGWEMN
Trigger: GTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAAAGAGGCTGGTTCGAGGTaGCATTATTGGCGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GRLGETGCAQWKQLGGRKEAGSR*HYWRGS
Trigger: AGAACCTCGCCAATAATGTCACCTCGAACCAGCCTC...TTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTTCCTGGGGTGCCACGTaGGATGAGGGCTGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPSWGAT*DEGCGE
Trigger: CTCGCCGCAGCCCTCATCTCACGTGGCACCCCAGGA...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR TCA 90 bp TTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGTGTTCAGGGCATCCATaGTCACGGCAGAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: FYLWVTLTGEPGLTKPTVCSGHP*SRQSQP
Trigger: TGGCTGGCTCTGCCGTGATCATGGATGCCCTGAACA...CACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTCAGCTCGTAAGAGCCTaGCTGACTGGACAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFQLVRA*LTGQRP
Trigger: TGGCCGCTGTCCAGTCAGTCAGGCTCTTACGAGCTG...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR TCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTCTCCAGTTGGAGCTTTaGCAGCCCCTCGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFLQLEL*QPLGCL
Trigger: AAGGCAGCCGAGGGGCTGTCAAAGCTCCAACTGGAG...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR TCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGCTGGACTCTGGGATGTaGACTCGGAAAACCAGTCTC +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVLDSGM*TRKTSL
Trigger: GAGACTGGTTTTCCGAGTTCACATCCCAGAGTCCAG...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGACATTCTGCTGCTGAATaGCTGTGGGGTAGGAACCCG +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRHSAAE*LWGRNP
Trigger: CGGGTTCCTACCCCACAGTCATTCAGCAGCAGAATG...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGCATTCTGCTGCTGAATaGCTGTGGGGTAGGAACCCG +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKHSAAE*LWGRNP
Trigger: CGGGTTCCTACCCCACAGTCATTCAGCAGCAGAATG...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCGGCTTCTTTTACGTCTaGTTTCTGGCAGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGGFFYV*FLAGGP
Trigger: AGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCC...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAGGCTTCTTTTACGTCTaGTTTCTGGCAGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGGFFYV*FLAGGP
Trigger: AGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCC...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTAGTGCCCATACATTaGTCCGCGTGTGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFLVPIH*SACGLR
Trigger: CCGGAGTCCACACGCGGATCAATGTATGGGCACTAA...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGATTAGTGCCCATACATTaGTCCGCGTGTGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRLVPIH*SACGLR
Trigger: CCGGAGTCCACACGCGGATCAATGTATGGGCACTAA...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGGCACTGAGTGGCCATaGCTTTCTTCTGAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKGTEWP*LSSEAF
Trigger: GAAGGCCTCAGAAGAAAGTCATGGCCACTCAGTGCC...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp AGTTTCTGTCTCTATCGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTGGCAGTGCCCCAGTCTaGACGCAGCCTCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SFCLYRGFWVSSACKLGSGSAPV*TQPLSA
Trigger: TGCAGAGAGAGGCTGCGTTCAGACTGGGGCACTGCC...AGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCGATAGAGACAGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609943.5
CDS-3UTR GCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGATGCAGTCACTGGGATaGTGCAGATGGGAATGGCAG +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVMQSLG*CRWEWQ
Trigger: CTGCCATTCCCATCTGCAGCATCCCAGTGACTGCAT...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGCCAGGACTTTGGTGTTaGCCACTATCTTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWPGLWC*PLSSHS
Trigger: GCTATGAGAAGATAGTGGGCAACACCAAAGTCCTGG...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGTAAAGAGACGATTCTaGCACTGGACTCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWVKRRF*HWTLGC
Trigger: ACATCCCAGAGTCCAGTGGCAGAATCGTCTCTTTAC...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGTCGGATGTAAAGTTCTaGCCCGTGAGGATCATTTGC +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWSDVKF*PVRIIC
Trigger: GCAAATGATCCTCACGGGGCAGAACTTTACATCCGA...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp ACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGCATCGCAGTACATGATGTaGTGGAACTCCTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: TARQDSSRARCPGQPFKASQYMM*WNSWWL
Trigger: AAGCCACCAGGAGTTCCAGCACATCATGTACTGCGA...TGCTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGTCGCAGTACATGATGTaGTGGAACTCCTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVSQYMM*WNSWWL
Trigger: AAGCCACCAGGAGTTCCAGCACATCATGTACTGCGA...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp GGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAAATCCAGGTTGTACAGCTaGAGCAGACAGGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: GRLGETGCAQWKQLGGRKSRLYS*SRQVLA
Trigger: AGCAAGCACCTGTCTGCTGCAGCTGTACAACCTGGA...TTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGAGCAAGCCGGAACCTTaGAAAGCATCCAGGTTGTAC +
Preference number: 4 (lower is better)
Translates to: QRKTRGDWVRSVETVGRKSKPEP*KASRLY
Trigger: GTACAACCTGGATGCTTTGCAAGGTTCCGGCTTGCT...CTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp TGCACATGCTTGAGATTCTCCACCGCTTTACGGAAAAGCACTCTGGCTGCTAGGGGTCACCGAGCACCTTaGCTCCGGGAAACAAGTTCG +
Preference number: 4 (lower is better)
Translates to: CTCLRFSTALRKSTLAARGHRAP*LRETSS
Trigger: CGAACTTGTTTCCCGGAGGCAAGGTGCTCGGTGACC...CCTAGCAGCCAGAGTGCTTTTCCGTAAAGCGGTGGAGAATCTCAAGCATGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCTGGCGCAGCGGGTCCTaGACGCGCCCGGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVWRSGS*TRPGKL
Trigger: CAGCTTCCCCGGGCGCGTCCAGGACCCGCTGCGCCA...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACGCCTGGATCAGTTCGTaGGACGGAGTGATCTCGATC +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDAWISS*DGVISI
Trigger: GATCGAGATCACTCCGTCCCACGAACTGATCCAGGC...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR CCA 90 bp GGAAGCTTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCGCCTGGATCAGTTCGTaGGACGGAGTGATCTCGATC +
Preference number: 4 (lower is better)
Translates to: GSFYLWVTLTGEPGLTKPAWISS*DGVISI
Trigger: GATCGAGATCACTCCGTCCCACGAACTGATCCAGGC...GGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AGGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAAGGGGCCCCACTGCCTaGATCAGTTCGTGGGACGGA +
Preference number: 4 (lower is better)
Translates to: RSSENKSLTTHSWLFPSERGPTA*ISSWDG
Trigger: TCCGTCCCACGAACTGATCCAGGCAGTGGGGCCCCT...TTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTCACAAGGCGAGTCCGTaGCGAGGCTGTTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFHKASP*RGCSGH
Trigger: ATGCCCTGAACAGCCTCGCCACGGACTCGCCTTGTG...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp AGAGGGAATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCAGCGAGGGGTCAGGGCTaGTCTTCCACATCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: RGNSALFLYLGRNPPPEAARGQG*SSTSWG
Trigger: CCCCCAAGATGTGGAAGACCAGCCCTGACCCCTCGC...TGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAATTCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AGGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGCGAGGGGTCAGGGCTaGTCTTCCACATCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: RSSENKSLTTHSWLFPSEARGQG*SSTSWG
Trigger: CCCCCAAGATGTGGAAGACCAGCCCTGACCCCTCGC...TTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGCGGAACCAGCAGGATaGATTCTGGAGCCGAGTTTC +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKAEPAG*ILEPSF
Trigger: GAAACTCGGCTCCAGAATCCATCCTGCTGGTTCCGC...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCTGCTGCAGATGGGAATaGCAGGCACCAGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: IQPFSSILVETHLQKHLGCCRWE*QAPAAW
Trigger: CCAAGCCGCTGGTGCCTGCCATTCCCATCTGCAGCA...GCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCTGTTTCTGGGATGCTGCAGATaGGAATGGCAGGCACCAGCG +
Preference number: 4 (lower is better)
Translates to: ALFLYLGRNPPPEALGLFLGCCR*EWQAPA
Trigger: CGCTGGTGCCTGCCATTCCCATCTGCAGCATCCCAG...AAACAGCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTCAGCGGCCACTCAAGTaGAGGGAGGGATGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFQRPLK*REGCSH
Trigger: GTGACTGCATCCCTCCCTCCACTTGAGTGGCCGCTG...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAAGAGCCTGACTGACTaGACAGCGGCCACTCAAGTG +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDKSLTD*TAATQV
Trigger: CACTTGAGTGGCCGCTGTCCAGTCAGTCAGGCTCTT...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGAAGAGCCTGACTGACTaGACAGCGGCCACTCAAGTG +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKKSLTD*TAATQV
Trigger: CACTTGAGTGGCCGCTGTCCAGTCAGTCAGGCTCTT...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GAACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGTCCCCGCACAGTCGATaGTTGCCCTCATGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: EQLAKTAPGLGALVSLLKSPHSR*LPSCCF
Trigger: AAAACAACATGAGGGCAACCATCGACTGTGCGGGGA...CTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTCCCCGCACAGTCGATaGTTGCCCTCATGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGSPHSR*LPSCCF
Trigger: AAAACAACATGAGGGCAACCATCGACTGTGCGGGGA...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAAGACGATTCTGCCACTaGACTCTGGGATGTGAACTC +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGRRFCH*TLGCEL
Trigger: GAGTTCACATCCCAGAGTCCAGTGGCAGAATCGTCT...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGCTTGATGGCTGGGACTaGGTGGTAGGTAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVLDGWD*VVGKVL
Trigger: CAGCACTTTACCTACCACCCAGTCCCAGCCATCAAG...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGGGCTGCAGATCAGAGTaGGGTCATATTCATCCGTGG +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVGCRSE*GHIHPW
Trigger: CCACGGATGAATATGACCCCACTCTGATCTGCAGCC...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp AACTCCTTGCCTTCAAAAGGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAAGCTGGCAGGGAGCCATaGTGGCCACGAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NSLPSKGTGAVSVTWKNEAGREP*WPRGRR
Trigger: CCTCCTGCCTCGTGGCCACCATGGCTCCCTGCCAGC...TTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACCTTTTGAAGGCAAGGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AGAGGGAATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCAGATAGCCCAGCAGGCTaGGGCTCAGGCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: RGNSALFLYLGRNPPPEADSPAG*GSGSCS
Trigger: GGAGCAAGAGCCTGAGCCCCAGCCTGCTGGGCTATC...TGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAATTCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTGCAGCTGCTGGTTGGTaGGTGAGTAGTGGATCACAG +
Preference number: 4 (lower is better)
Translates to: RGFWVSSACKLGSWVTFLAAAGW*VSSGSQ
Trigger: CTGTGATCCACTACTCACCCACCAACCAGCAGCTGC...AAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGCGCAGCTGCTGGTTaGTGGGTGAGTAGTGGATCA +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDSAAAG*WVSSGS
Trigger: TGATCCACTACTCACCCACCAACCAGCAGCTGCGCT...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCAGCGCAGCTGCTGGTTaGTGGGTGAGTAGTGGATCA +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFSAAAG*WVSSGS
Trigger: TGATCCACTACTCACCCACCAACCAGCAGCTGCGCT...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTATGTGCTGGAACTCCTaGTGGCTTCCGCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFMCWNS*WLPQRS
Trigger: GCTGCGCTGCGGAAGCCACCAGGAGTTCCAGCACAT...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGATGTGCTGGAACTCCTaGTGGCTTCCGCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKMCWNS*WLPQRS
Trigger: GCTGCGCTGCGGAAGCCACCAGGAGTTCCAGCACAT...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGCAGTACATGATGTGCTaGAACTCCTGGTGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVQYMMC*NSWWLP
Trigger: CGGAAGCCACCAGGAGTTCCAGCACATCATGTACTG...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAAAAGGTCTGGTGGTGCCTaGTGCGAAATTCTCGCAGTA +
Preference number: 4 (lower is better)
Translates to: GRLGETGCAQWKQLGGRKRSGGA*CEILAV
Trigger: TACTGCGAGAATTTCGCACCAGGCACCACCAGACCT...TTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGGCGGGCCAGGTCTGGTaGTGCCTGGTGCGAAATTCT +
Preference number: 4 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKAGQVW*CLVRNS
Trigger: AGAATTTCGCACCAGGCACCACCAGACCTGGCCCGC...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGTTTTTGGCGGCTCTTTaGCTCGTGGCATTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMFLAAL*LVAFCC
Trigger: GCAGCAGAATGCCACGAGCCAAAGAGCCGCCAAAAA...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTTTTTGGCGGCTCTTTaGCTCGTGGCATTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVFLAAL*LVAFCC
Trigger: GCAGCAGAATGCCACGAGCCAAAGAGCCGCCAAAAA...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp AGAGGGAATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACCGGGGGTCCGTTTTTaGCGGCTCTTTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: RGNSALFLYLGRNPPPEAPGVRF*RLFGSW
Trigger: CCACGAGCCAAAGAGCCGCCAAAAACGGACCCCCGG...TGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAATTCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGGTGTGGACTCCGGGCTaGGAGATGAACATGAAAGGA +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMVWTPG*EMNMKG
Trigger: TCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACAC...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGGCGAGCTCTAAGGACTGACAGTTCAGTTTCTGTCTCTATCGAGGGTTTTGGGACATTGATCCGCGTGTaGACTCCGGGCTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: GRALRTDSSVSVSIEGFGTLIRV*TPGWEM
Trigger: CATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT...CCCAAAACCCTCGATAGAGACAGAAACTGAACTGTCAGTCCTTAGAGCTCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGGGCACTGAGTGTAAGCTGGGCTCTTaGGTCACGTTCCTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: WVTLTGEPGLTKPTVGTECKLGS*VTFLWL
Trigger: CAACCAAAGGAACGTGACCCAAGAGCCCAGCTTACA...CTCAGTGCCCACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCCTTCAGCCTGTAAGCTaGGCTCTTGGGTCACGTTCC +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFLQPVS*ALGSRS
Trigger: GGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAG...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGAAGACTAGGGGAGACTaGGTGCGCTCAGTGGAAACA +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVKTRGD*VRSVET
Trigger: TGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTT...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCATCCCCCGCTTGTCCTaGGGTATCTGCAGTACATGC +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFIPRLS*GICSTC
Trigger: GCATGTACTGCAGATACCCCAGGACAAGCGGGGGAT...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGTCCTTTTTCACCCTGTaGACAAGGAAGCTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWSFFTL*TRKLSY
Trigger: GTAGCTCAGCTTCCTTGTCCACAGGGTGAAAAAGGA...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CAA 72 bp GAAGAAAGCAAGCCGGAACCTTGCAAAGCATCCAGGTaGTACAGCTGCAGCAGACAGGTGCTTGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: EESKPEPCKASR*YSCSRQVLALC
Trigger: GCAGAGAGCAAGCACCTGTCTGCTGCAGCTGTACAACCTGGATGCTTTGCAAGGTTCCGGCTTGCTTTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCGAGGCTGGTTCGAGGTaGCATTATTGGCGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFEAGSR*HYWRGS
Trigger: AGAACCTCGCCAATAATGTCACCTCGAACCAGCCTC...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTGTTCAGGGCATCCATaGTCACGGCAGAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKCSGHP*SRQSQP
Trigger: TGGCTGGCTCTGCCGTGATCATGGATGCCCTGAACA...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GTTAAGATGCGCTGGGTCACCGAGCACCTTGCCTCCGGGAAACAAGTTCGGGAAGTCCCAATGAAGATCTaGAGTCCCAGAGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: VKMRWVTEHLASGKQVREVPMKI*SPRGLF
Trigger: AAACAAGCCTCTGGGACTTCAGATCTTCATTGGGAC...TTCCCGAACTTGTTTCCCGGAGGCAAGGTGCTCGGTGACCCAGCGCATCTTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGGTCCCAATGAAGATCTaGAGTCCCAGAGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVVPMKI*SPRGLF
Trigger: AAACAAGCCTCTGGGACTTCAGATCTTCATTGGGAC...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCGTCCCAATGAAGATCTaGAGTCCCAGAGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGVPMKI*SPRGLF
Trigger: AAACAAGCCTCTGGGACTTCAGATCTTCATTGGGAC...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp CTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGAGAAAACCATGGGCAGCTCGTaGGCAGATCGCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: LTTHSWLFPSEVNIAGEKTMGSS*ADRWEH
Trigger: GTGCTCCCAGCGATCTGCTCACGAGCTGCCCATGGT...TTTCTCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GTTAAGATGCGCTGGGTCACCGAGCACCTTGCCTCCGGGAAACAAGTTCGGGAAAATTCTCGCAGTACATaGTGTGCTGGAACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: VKMRWVTEHLASGKQVRENSRST*CAGTPG
Trigger: ACCAGGAGTTCCAGCACATCATGTACTGCGAGAATT...TTCCCGAACTTGTTTCCCGGAGGCAAGGTGCTCGGTGACCCAGCGCATCTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCAATTCTCGCAGTACATaGTGTGCTGGAACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGNSRST*CAGTPG
Trigger: ACCAGGAGTTCCAGCACATCATGTACTGCGAGAATT...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAATTCTCGCAGTACATaGTGTGCTGGAACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVNSRST*CAGTPG
Trigger: ACCAGGAGTTCCAGCACATCATGTACTGCGAGAATT...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGAGAAGTCTTAACAGGTaGTCTTGTCTGGGCAAGACA +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWRSLNR*SCLGKT
Trigger: TGTCTTGCCCAGACAAGATCACCTGTTAAGACTTCT...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAGCCATGACTTTCTTCTaGGGCCTTCTGCCTACAGAC +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRAMTFF*GLLPTD
Trigger: GTCTGTAGGCAGAAGGCCTCAGAAGAAAGTCATGGC...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCTGTTTACGCGTACAGGAGGTTaGGCTACCAGGAGGCCGTTT +
Preference number: 4 (lower is better)
Translates to: ALFLYLGRNPPPEALGLFTRTGG*ATRRPF
Trigger: AAACGGCCTCCTGGTAGCTCAACCTCCTGTACGCGT...AAACAGCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GTGCGGATAGGTCTTCAGGGGCAGAAGGGATCTTTAAATAGGTTCAGGTCAAATGGTCCACAGACCCCATaGTGCGGAGGGGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: VRIGLQGQKGSLNRFRSNGPQTP*CGGDGS
Trigger: ACTGCCATCCCCTCCGCATCATGGGGTCTGTGGACC...ATTTGACCTGAACCTATTTAAAGATCCCTTCTGCCCCTGAAGACCTATCCGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609943.5
CDS-3UTR GCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCCCAGGACTTTGGTGTTaGCCACTATCTTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGPGLWC*PLSSHS
Trigger: GCTATGAGAAGATAGTGGGCAACACCAAAGTCCTGG...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp CACACCCACAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGTAAAGAGACGATTCTaGCACTGGACTCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: HTHRGRLGETGCAQWKQLVKRRF*HWTLGC
Trigger: ACATCCCAGAGTCCAGTGGCAGAATCGTCTCTTTAC...CAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTGTGGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGGTAAAGAGACGATTCTaGCACTGGACTCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVVKRRF*HWTLGC
Trigger: ACATCCCAGAGTCCAGTGGCAGAATCGTCTCTTTAC...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp ACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGCATCGGATGTAAAGTTCTaGCCCGTGAGGATCATTTGC +
Preference number: 4 (lower is better)
Translates to: TARQDSSRARCPGQPFKASDVKF*PVRIIC
Trigger: GCAAATGATCCTCACGGGGCAGAACTTTACATCCGA...TGCTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTCGGATGTAAAGTTCTaGCCCGTGAGGATCATTTGC +
Preference number: 4 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGSDVKF*PVRIIC
Trigger: GCAAATGATCCTCACGGGGCAGAACTTTACATCCGA...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGTCCATCTCCCAAATTTaGTGTCCATCTGTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWSISQI*CPSVVF
Trigger: GAAGACCACAGATGGACAGCAAATTTGGGAGATGGA...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAACAGGTGTGCGGATATaGTTGTTCCGATATTCAGGG +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGTGVRI*LFRYSG
Trigger: CCCTGAATATCGGAACAAGCATATCCGCACACCTGT...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGACAGGTGTGCGGATATaGTTGTTCCGATATTCAGGG +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVTGVRI*LFRYSG
Trigger: CCCTGAATATCGGAACAAGCATATCCGCACACCTGT...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp CGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCATGGGGCTCAGGCTCTTaGTCCGCTGGTAGAGTACGG +
Preference number: 4 (lower is better)
Translates to: RLSWGICSTCKQKQTHLPWGSGS*SAGRVR
Trigger: CCGTACTCTACCAGCGGAGCAAGAGCCTGAGCCCCA...TGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTCCAGGTTGTACAGCTaGAGCAGACAGGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFSRLYS*SRQVLA
Trigger: AGCAAGCACCTGTCTGCTGCAGCTGTACAACCTGGA...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTTGGTGCCTTCTATCTGGAGTaGCAAACACACCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GFGFLQPVSWALGSRSFGAFYLE*QTHLAP
Trigger: TGGGGCCAGGTGTGTTTGGCACTCCAGATAGAAGGC...ACCAAAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GAACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGTTATTGGCGAGGTTCTaGGGGAATAATGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: EQLAKTAPGLGALVSLLKLLARF*GNNEQG
Trigger: TCCCTGCTCATTATTCCCCCAGAACCTCGCCAATAA...CTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACTGTCCTCGGCGAGGCTaGTTCGAGGTGACATTATTG +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDCPRRG*FEVTLL
Trigger: CAATAATGTCACCTCGAACCAGCCTCGCCGAGGACA...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTGTCCTCGGCGAGGCTaGTTCGAGGTGACATTATTG +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFCPRRG*FEVTLL
Trigger: CAATAATGTCACCTCGAACCAGCCTCGCCGAGGACA...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ATTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGAGGCAGGCCGGCCTTaGATGGGGCGGCAGACACCG +
Preference number: 4 (lower is better)
Translates to: ILEQEKGDSFFHKAIPSPEAGRP*MGRQTP
Trigger: CGGTGTCTGCCGCCCCATCCAAGGCCGGCCTGCCTC...AGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACCAGCAGGATGGATTCTaGAGCCGAGTTTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDQQDGF*SRVSPL
Trigger: GAGAGGAGAAACTCGGCTCCAGAATCCATCCTGCTG...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGCAGCAGGATGGATTCTaGAGCCGAGTTTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKQQDGF*SRVSPL
Trigger: GAGAGGAGAAACTCGGCTCCAGAATCCATCCTGCTG...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTGCGGCTTGGGCCAAGTaGGCGGAACCAGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGIAAWAK*AEPAGW
Trigger: CCATCCTGCTGGTTCCGCCCACTTGGCCCAAGCCGC...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTGCGGCTTGGGCCAAGTaGGCGGAACCAGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPAAWAK*AEPAGW
Trigger: CCATCCTGCTGGTTCCGCCCACTTGGCCCAAGCCGC...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp CTGTCTCATGTAGAATGTGCTTTTGGTCAGCAGGTGCTTACTATTTGGACGGAAGCGGCTTGGGCCAAGTaGGCGGAACCAGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: LSHVECAFGQQVLTIWTEAAWAK*AEPAGW
Trigger: CCATCCTGCTGGTTCCGCCCACTTGGCCCAAGCCGC...TTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAGCACATTCTACATGAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCATGCTGCAGATGGGAATaGCAGGCACCAGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RLSWGICSTCKQKQTHLPCCRWE*QAPAAW
Trigger: CCAAGCCGCTGGTGCCTGCCATTCCCATCTGCAGCA...TGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AGGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAACAGCGGCCACTCAAGTaGAGGGAGGGATGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: RSSENKSLTTHSWLFPSEQRPLK*REGCSH
Trigger: GTGACTGCATCCCTCCCTCCACTTGAGTGGCCGCTG...TTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GAACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGCCCTCATGTTGTTTTTaGGCTCCAAGGGTATCTCCA +
Preference number: 4 (lower is better)
Translates to: EQLAKTAPGLGALVSLLKPSCCF*APRVSP
Trigger: TGGAGATACCCTTGGAGCCCAAAAACAACATGAGGG...CTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGTCCCCGCACAGTCGATaGTTGCCCTCATGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMSPHSR*LPSCCF
Trigger: AAAACAACATGAGGGCAACCATCGACTGTGCGGGGA...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTGAGCATTTTGCCTTCTATCTGGAGTGCCAAACACACCTGGCCCCACTCCCAGTCCCCGCACAGTCGATaGTTGCCCTCATGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LSILPSIWSAKHTWPHSQSPHSR*LPSCCF
Trigger: AAAACAACATGAGGGCAACCATCGACTGTGCGGGGA...CTGGGAGTGGGGCCAGGTGTGTTTGGCACTCCAGATAGAAGGCAAAATGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGCTTGTCTTTCAACCATaGGCAGCTCGTGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMLVFQP*AAREQI
Trigger: GATCTGCTCACGAGCTGCCCATGGTTGAAAGACAAG...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGACTCCGTCTTGATGGCTaGGACTGGGTGGTAGGTAAA +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRLRLDG*DWVVGK
Trigger: TTTACCTACCACCCAGTCCCAGCCATCAAGACGGAG...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAGGCTGCAGATCAGAGTaGGGTCATATTCATCCGTGG +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRGCRSE*GHIHPW
Trigger: CCACGGATGAATATGACCCCACTCTGATCTGCAGCC...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATAGCGAGGCCTGCTGGTTaGTCGGAGAGGGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: VRTNHSPHTLGFSPVKSIARPAG*SERGGA
Trigger: TGCTCCACCCCTCTCCGACCAACCAGCAGGCCTCGC...TATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGAAGCTTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCAGGTCTGGTGGTGCCTaGTGCGAAATTCTCGCAGTA +
Preference number: 4 (lower is better)
Translates to: GSFYLWVTLTGEPGLTKPRSGGA*CEILAV
Trigger: TACTGCGAGAATTTCGCACCAGGCACCACCAGACCT...GGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCAGGTCTGGTGGTGCCTaGTGCGAAATTCTCGCAGTA +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFRSGGA*CEILAV
Trigger: TACTGCGAGAATTTCGCACCAGGCACCACCAGACCT...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGATTTTTGGCGGCTCTTTaGCTCGTGGCATTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRFLAAL*LVAFCC
Trigger: GCAGCAGAATGCCACGAGCCAAAGAGCCGCCAAAAA...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGGTAATACTTCCTTTTaGTCACTGACCGGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKGNTSF*SLTGGP
Trigger: CGGACCCCCGGTCAGTGACCAAAAGGAAGTATTACC...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGTGGACTCCGGGCTaGGAGATGAACATGAAAGGA +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKVWTPG*EMNMKG
Trigger: TCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACAC...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCGTGTGGACTCCGGGCTaGGAGATGAACATGAAAGGA +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFVWTPG*EMNMKG
Trigger: TCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACAC...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGCTCACCACACACTCTTaGCTTTTCCCCAGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMLTTHS*LFPSEV
Trigger: GACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGGAGAGACCTGTTTGTTaGAGAATTGGTTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWEERPVC*RIGFLS
Trigger: GGAGAGAAAACCAATTCTCCAACAAACAGGTCTCTC...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp AGTTTCTGTCTCTATCGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTGGGGGCTGTATGGCTTaGGGCCATAGTCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: SFCLYRGFWVSSACKLGSGGCMA*GHSPGH
Trigger: ATGTCCTGGACTATGGCCTCAAGCCATACAGCCCCC...AGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCGATAGAGACAGAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp CTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGAGAAAGTTCGTGGGACGGAGTaGTCTCGATCCGAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LTTHSWLFPSEVNIAGEKVRGTE*SRSEGS
Trigger: TGAGCCCTCGGATCGAGATCACTCCGTCCCACGAAC...TTTCTCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGGTCCCAATGAAGATCTaGAGTCCCAGAGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVVPMKI*SPRGLF
Trigger: AAACAAGCCTCTGGGACTTCAGATCTTCATTGGGAC...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGAATTCTCGCAGTACATaGTGTGCTGGAACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVNSRST*CAGTPG
Trigger: ACCAGGAGTTCCAGCACATCATGTACTGCGAGAATT...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACGGCTTCTTTTACGTCTaGTTTCTGGCAGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDGFFYV*FLAGGP
Trigger: AGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCC...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAAGAAGTCTTAACAGGTaGTCTTGTCTGGGCAAGACA +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGRSLNR*SCLGKT
Trigger: TGTCTTGCCCAGACAAGATCACCTGTTAAGACTTCT...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp AGTTTCTGTCTCTATCGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTCTGGGAAGCACATCCTaGGCTCGGCTGTCCCACTTA +
Preference number: 4 (lower is better)
Translates to: SFCLYRGFWVSSACKLGSLGSTS*ARLSHL
Trigger: TAAGTGGGACAGCCGAGCTCAGGATGTGCTTCCCAG...AGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCGATAGAGACAGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp AGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTAATCACAGTCTGGGAAGCACATCCTaGGCTCGGCTGTCCCACTTA +
Preference number: 4 (lower is better)
Translates to: SCICDLEKRTQGLGFNHSLGSTS*ARLSHL
Trigger: TAAGTGGGACAGCCGAGCTCAGGATGTGCTTCCCAG...ACTGTGATTAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp TGCTTTGGTTCCACGAAACGTAATGCCCTAGCCTCGAGCCTAGGAGACCCAAGGGGTCAAATTAACCAGTaGAGCTGGGAAGCACATCCT +
Preference number: 4 (lower is better)
Translates to: CFGSTKRNALASSLGDPRGQINQ*SWEAHP
Trigger: AGGATGTGCTTCCCAGCTTCACTGGTTAATTTGACC...CCTTGGGTCTCCTAGGCTCGAGGCTAGGGCATTACGTTTCGTGGAACCAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGCTTCATGTTAGAATTTaGGTGCGGATAGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWLHVRI*VRIGLQ
Trigger: CTGAAGACCTATCCGCACTCAAATTCTAACATGAAG...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTTGGTGCCATGACTTTCTTCTaGGGCCTTCTGCCTACAGAC +
Preference number: 4 (lower is better)
Translates to: GFGFLQPVSWALGSRSFGAMTFF*GLLPTD
Trigger: GTCTGTAGGCAGAAGGCCTCAGAAGAAAGTCATGGC...ACCAAAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTGGCACTGAGTGGCCATaGCTTTCTTCTGAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFGTEWP*LSSEAF
Trigger: GAAGGCCTCAGAAGAAAGTCATGGCCACTCAGTGCC...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371564.8
CDS-3UTR TCA 90 bp AGAGGGAATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCAGCCCACAGTGGGCACTaGGTGGCCATGACTTTCTTC +
Preference number: 4 (lower is better)
Translates to: RGNSALFLYLGRNPPPEAAHSGH*VAMTFF
Trigger: GAAGAAAGTCATGGCCACTCAGTGCCCACTGTGGGC...TGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAATTCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAGCTGGCGACCTTATGTaGATTCGGCTCTTCTTCGTT +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRAGDLM*IRLFFV
Trigger: AACGAAGAAGAGCCGAATGCACATAAGGTCGCCAGC...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp TGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAAGAAGACATCATCGGGGTATaGGGGTCCGGAGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CPGVSAVHANRNKHICQEDIIGV*GSGGWA
Trigger: AGCCCACCCTCCGGACCCGCATACCCCGATGATGTC...TTCTTGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CATATTTACATTAACTTAGATGTAGCAGTGCAAACCTTCACTCAACTGAGATCCCAGGCCCGAGGCCCCTaGTGGCTTGGCCGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: HIYINLDVAVQTFTQLRSQARGP*WLGRAQ
Trigger: CTGAGCGCGGCCAAGCCAGCAGGGGCCTCGGGCCTG...GGATCTCAGTTGAGTGAAGGTTTGCACTGCTACATCTAAGTTAATGTAAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp TGCACATGCTTGAGATTCTCCACCGCTTTACGGAAAAGCACTCTGGCTGCTAGGATGCAGTCACTGGGATaGTGCAGATGGGAATGGCAG +
Preference number: 4 (lower is better)
Translates to: CTCLRFSTALRKSTLAARMQSLG*CRWEWQ
Trigger: CTGCCATTCCCATCTGCAGCATCCCAGTGACTGCAT...CCTAGCAGCCAGAGTGCTTTTCCGTAAAGCGGTGGAGAATCTCAAGCATGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGCCAGGACTTTGGTGTTaGCCACTATCTTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMPGLWC*PLSSHS
Trigger: GCTATGAGAAGATAGTGGGCAACACCAAAGTCCTGG...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp GGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAAATCGGATGTAAAGTTCTaGCCCGTGAGGATCATTTGC +
Preference number: 4 (lower is better)
Translates to: GRLGETGCAQWKQLGGRKSDVKF*PVRIIC
Trigger: GCAAATGATCCTCACGGGGCAGAACTTTACATCCGA...TTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGTCCATCTCCCAAATTTaGTGTCCATCTGTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVSISQI*CPSVVF
Trigger: GAAGACCACAGATGGACAGCAAATTTGGGAGATGGA...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAATCACAGGCGAGGCCTaGTGGTTGGTCGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGITGEA*WLVGEG
Trigger: CCCCTCTCCGACCAACCAGCAGGCCTCGCCTGTGAT...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGTCGCAGTACATGATGTaGTGGAACTCCTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKSQYMM*WNSWWL
Trigger: AAGCCACCAGGAGTTCCAGCACATCATGTACTGCGA...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp GGAAGCTTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCTCGCAGTACATGATGTaGTGGAACTCCTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GSFYLWVTLTGEPGLTKPSQYMM*WNSWWL
Trigger: AAGCCACCAGGAGTTCCAGCACATCATGTACTGCGA...GGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGTCTGGTGGTGCCTGGTaGGAAATTCTCGCAGTACAT +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKSGGAW*EILAVH
Trigger: ATGTACTGCGAGAATTTCGCACCAGGCACCACCAGA...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp GTGCGGATAGGTCTTCAGGGGCAGAAGGGATCTTTAAATAGGTTCAGGTCAAATGGCCAGGTCTGGTGGTaGCTGGTGCGAAATTCTCGC +
Preference number: 4 (lower is better)
Translates to: VRIGLQGQKGSLNRFRSNGQVWW*LVRNSR
Trigger: GCGAGAATTTCGCACCAGGCACCACCAGACCTGGCC...ATTTGACCTGAACCTATTTAAAGATCCCTTCTGCCCCTGAAGACCTATCCGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGACTTTTGGTCAGCAGGTaGTTACTATTTGGACGGAAC +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGLLVSR*LLFGRN
Trigger: GTTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAG...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp ACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGCAGTCTCATGTAGAATGTaGTTTTGGTCAGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: TARQDSSRARCPGQPFKAVSCRM*FWSAGA
Trigger: AGCACCTGCTGACCAAAAGCACATTCTACATGAGAC...TGCTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGGCTCTGAGAACTCCTTaGCTTCAAAAGGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVALRTP*LQKVQE
Trigger: CTCCTGTACCTTTTGAAGGCAAGGAGTTCTCAGAGC...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTCACGTTCCTTTGGTTaGTCTGAGAACTCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVSRSFG*SENSLP
Trigger: AGGCAAGGAGTTCTCAGAGCAACCAAAGGAACGTGA...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAAATCACGTTCCTTTGGTTaGTCTGAGAACTCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: GRLGETGCAQWKQLGGRKSRSFG*SENSLP
Trigger: AGGCAAGGAGTTCTCAGAGCAACCAAAGGAACGTGA...TTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACATGGCGCAGCGGGTCCTaGACGCGCCCGGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTWRSGS*TRPGKL
Trigger: CAGCTTCCCCGGGCGCGTCCAGGACCCGCTGCGCCA...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp ACAATACAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTTGGGACCCCTCGCAGTaGGGCTGGCGGAGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: TIQEDLQTLEIYYIQQHGWDPSQ*GWRRRL
Trigger: GAGCCGCCTCCGCCAGCCCCACTGCGAGGGGTCCCA...ACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTTATTGGCGAGGTTCTaGGGGAATAATGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVLLARF*GNNEQG
Trigger: TCCCTGCTCATTATTCCCCCAGAACCTCGCCAATAA...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTGCGAGGGGTCAGGGCTaGTCTTCCACATCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPARGQG*SSTSWG
Trigger: CCCCCAAGATGTGGAAGACCAGCCCTGACCCCTCGC...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAGTATCTCCAGGACTTTaGTGTTGCCCACTATCTTCT +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGVSPGL*CCPLSS
Trigger: AGAAGATAGTGGGCAACACCAAAGTCCTGGAGATAC...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGTCTGCCACTGGACTCTaGGATGTGAACTCGGAAAAC +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKSATGL*DVNSEN
Trigger: GTTTTCCGAGTTCACATCCCAGAGTCCAGTGGCAGA...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGAAGCTTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCTCTGCCACTGGACTCTaGGATGTGAACTCGGAAAAC +
Preference number: 4 (lower is better)
Translates to: GSFYLWVTLTGEPGLTKPSATGL*DVNSEN
Trigger: GTTTTCCGAGTTCACATCCCAGAGTCCAGTGGCAGA...GGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGACGATTCTGCCACTaGACTCTGGGATGTGAACTC +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRRRFCH*TLGCEL
Trigger: GAGTTCACATCCCAGAGTCCAGTGGCAGAATCGTCT...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGACTTGTCTTTCAACCATaGGCAGCTCGTGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRLVFQP*AAREQI
Trigger: GATCTGCTCACGAGCTGCCCATGGTTGAAAGACAAG...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGTGTCCTTATCCACCGTaGCTTCCATCTCCCAAATTT +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVCPYPP*LPSPKF
Trigger: AAATTTGGGAGATGGAAGCCACGGTGGATAAGGACA...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTACTTGATGGCTGGGACTaGGTGGTAGGTAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GTGAVSVTWKNERKGWGLLDGWD*VVGKVL
Trigger: CAGCACTTTACCTACCACCCAGTCCCAGCCATCAAG...TAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TGCACATGCTTGAGATTCTCCACCGCTTTACGGAAAAGCACTCTGGCTGCTAGGGGCTGCAGATCAGAGTaGGGTCATATTCATCCGTGG +
Preference number: 4 (lower is better)
Translates to: CTCLRFSTALRKSTLAARGCRSE*GHIHPW
Trigger: CCACGGATGAATATGACCCCACTCTGATCTGCAGCC...CCTAGCAGCCAGAGTGCTTTTCCGTAAAGCGGTGGAGAATCTCAAGCATGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTCTCCCCAGGCCTCCATaGGTGGGGCTGCAGATCAGA +
Preference number: 4 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGILPRPP*VGLQIR
Trigger: TCTGATCTGCAGCCCCACCCATGGAGGCCTGGGGAG...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp ATTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTCCCGTGCGGAACTGCTaGCAGGGAGCCATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ILEQEKGDSFFHKAIPSPPVRNC*QGAMVA
Trigger: GGCCACCATGGCTCCCTGCCAGCAGTTCCGCACGGG...AGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp CGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAGTAGAGTACGGCCGCTaGGTTCTGTTGCTGGTAGCG +
Preference number: 4 (lower is better)
Translates to: RLSWGICSTCKQKQTHLPVEYGR*VLLLVA
Trigger: CGCTACCAGCAACAGAACCCAGCGGCCGTACTCTAC...TGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGATAGCCCAGCAGGCTaGGGCTCAGGCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGDSPAG*GSGSCS
Trigger: GGAGCAAGAGCCTGAGCCCCAGCCTGCTGGGCTATC...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAAGAAGATAGCCCAGCAGGCTaGGGCTCAGGCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: CPGVSAVHANRNKHICQEDSPAG*GSGSCS
Trigger: GGAGCAAGAGCCTGAGCCCCAGCCTGCTGGGCTATC...TTCTTGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTGCAGCTGCTGGTTGGTaGGTGAGTAGTGGATCACAG +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFAAAGW*VSSGSQ
Trigger: CTGTGATCCACTACTCACCCACCAACCAGCAGCTGC...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTGCAGCTGCTGGTTGGTaGGTGAGTAGTGGATCACAG +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFAAAGW*VSSGSQ
Trigger: CTGTGATCCACTACTCACCCACCAACCAGCAGCTGC...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTAGCGCAGCTGCTGGTTaGTGGGTGAGTAGTGGATCA +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFSAAAG*WVSSGS
Trigger: TGATCCACTACTCACCCACCAACCAGCAGCTGCGCT...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTTGCTGGAACTCCTGGTaGCTTCCGCAGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPCWNSW*LPQRSC
Trigger: GCAGCTGCGCTGCGGAAGCCACCAGGAGTTCCAGCA...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTAAGGTCTGGTGGTGCCTaGTGCGAAATTCTCGCAGTA +
Preference number: 4 (lower is better)
Translates to: GTGAVSVTWKNERKGWGLRSGGA*CEILAV
Trigger: TACTGCGAGAATTTCGCACCAGGCACCACCAGACCT...TAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGGAAGGTGAGGGGCTGTaGAGGGCTCCGAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLEGEGL*RAPRGQ
Trigger: CTGACCCCTCGGAGCCCTCCACAGCCCCTCACCTTC...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp CCTAGCCTCGAGCCTAGGAGACCCAAGGTTAAGATGCGCTGGGTCACCGAGCACTGTAGAATGTGCTTTTaGTCAGCAGGTGCTTACTAT +
Preference number: 4 (lower is better)
Translates to: PSLEPRRPKVKMRWVTEHCRMCF*SAGAYY
Trigger: ATAGTAAGCACCTGCTGACCAAAAGCACATTCTACA...GTGCTCGGTGACCCAGCGCATCTTAACCTTGGGTCTCCTAGGCTCGAGGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp AATGAATCCCCCGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAAGGCCCAGTTGTGGCATaGACTGGGCGAGCTCTAAGG +
Preference number: 4 (lower is better)
Translates to: NESPACPGVSAVHANRNKGPVVA*TGRALR
Trigger: CCTTAGAGCTCGCCCAGTCCATGCCACAACTGGGCC...TTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCGGGGGATTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGCTGTGGCCCAGTTGTaGCATGGACTGGGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGAVAQL*HGLGEL
Trigger: GAGCTCGCCCAGTCCATGCCACAACTGGGCCACAGC...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp ATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCATCCCCCGCTTGTCCTaGGGTATCTGCAGTACATGC +
Preference number: 4 (lower is better)
Translates to: IQPFSSILVETHLQKHLGIPRLS*GICSTC
Trigger: GCATGTACTGCAGATACCCCAGGACAAGCGGGGGAT...GCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGAAGCTTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCGGAAGCTTTTACCTCTaGGTAACCTTGACGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GSFYLWVTLTGEPGLTKPGSFYL*VTLTGE
Trigger: CTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCC...GGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGATTTTGCCTTCTATCTaGAGTGCCAAACACACCTGG +
Preference number: 4 (lower is better)
Translates to: QRKTRGDWVRSVETVGRKILPSI*SAKHTW
Trigger: CCAGGTGTGTTTGGCACTCCAGATAGAAGGCAAAAT...CTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTCTTTGAGCTTAGGGTaGGTGAGGGAAAGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFSLSLG*VRERSF
Trigger: GAACGACCTTTCCCTCACCCACCCTAAGCTCAAAGA...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGCTCACCACACACTCTTaGCTTTTCCCCAGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKLTTHS*LFPSEV
Trigger: GACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGACTCACCACACACTCTTaGCTTTTCCCCAGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRLTTHS*LFPSEV
Trigger: GACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGGGCACTGAGCTCACTGAGGCGTCTTaGCTACTGGATGTAAACAAA +
Preference number: 4 (lower is better)
Translates to: WVTLTGEPGLTKPTVGTELTEAS*LLDVNK
Trigger: TTTGTTTACATCCAGTAGCCAAGACGCCTCAGTGAG...CTCAGTGCCCACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGAAGGTTAAGATGCGCTaGGTCACCGAGCACCTTGCC +
Preference number: 4 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKKVKMR*VTEHLA
Trigger: GGCAAGGTGCTCGGTGACCCAGCGCATCTTAACCTT...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp AGTTTCTGTCTCTATCGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTATGATGCGGAGGGGATaGCAGTGCCCCAGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SFCLYRGFWVSSACKLGSMMRRG*QCPSLN
Trigger: GTTCAGACTGGGGCACTGCCATCCCCTCCGCATCAT...AGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCGATAGAGACAGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609943.5
CDS-3UTR TCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTCTGGACTCTGGGATGTaGACTCGGAAAACCAGTCTC +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFLDSGM*TRKTSL
Trigger: GAGACTGGTTTTCCGAGTTCACATCCCAGAGTCCAG...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR TCA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGCTGGACTCTGGGATGTaGACTCGGAAAACCAGTCTC +
Preference number: 4 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKLDSGM*TRKTSL
Trigger: GAGACTGGTTTTCCGAGTTCACATCCCAGAGTCCAG...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGAATTCTCGCAGTACATaGTGTGCTGGAACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKNSRST*CAGTPG
Trigger: ACCAGGAGTTCCAGCACATCATGTACTGCGAGAATT...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR TCA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACAGCCTCTGACCTTGACTaGCCGGGGGCGGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTASDLD*PGAGQV
Trigger: GACCTGGCCCGCCCCCGGTCAGTCAAGGTCAGAGGC...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp AGGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAACATTCTGCTGCTGAATaGCTGTGGGGTAGGAACCCG +
Preference number: 4 (lower is better)
Translates to: RSSENKSLTTHSWLFPSEHSAAE*LWGRNP
Trigger: CGGGTTCCTACCCCACAGTCATTCAGCAGCAGAATG...TTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GTGCGGATAGGTCTTCAGGGGCAGAAGGGATCTTTAAATAGGTTCAGGTCAAATCTGGGAAGCACATCCTaGGCTCGGCTGTCCCACTTA +
Preference number: 4 (lower is better)
Translates to: VRIGLQGQKGSLNRFRSNLGSTS*ARLSHL
Trigger: TAAGTGGGACAGCCGAGCTCAGGATGTGCTTCCCAG...ATTTGACCTGAACCTATTTAAAGATCCCTTCTGCCCCTGAAGACCTATCCGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp CACACCCACAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGAAACAACTGAATGGCTaGAAAATGAATCCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: HTHRGRLGETGCAQWKQLKQLNG*KMNPPL
Trigger: AAGCGGGGGATTCATTTTTCAGCCATTCAGTTGTTT...CAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTGTGGGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GAACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGCTGTACAGACTGGACTaGGAAAACACTCTAAGTACA +
Preference number: 4 (lower is better)
Translates to: EQLAKTAPGLGALVSLLKLYRLD*ENTLST
Trigger: TGTACTTAGAGTGTTTTCTCAGTCCAGTCTGTACAG...CTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp CAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGCTGTACAGACTGGACTaGGAAAACACTCTAAGTACA +
Preference number: 4 (lower is better)
Translates to: QRKTRGDWVRSVETVGRKLYRLD*ENTLST
Trigger: TGTACTTAGAGTGTTTTCTCAGTCCAGTCTGTACAG...CTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAAAACCTTCACTCAACTaGGATCCTTCTAACACACGT +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGKPSLN*DPSNTR
Trigger: ACGTGTGTTAGAAGGATCTCAGTTGAGTGAAGGTTT...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACACCGTCGGGTTGGGGCTaGCGCTCGGGGGCGTTCATG +
Preference number: 4 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTPSGWG*RSGAFM
Trigger: CATGAACGCCCCCGAGCGGCAGCCCCAACCCGACGG...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGACCAGGACTTTGGTGTTaGCCACTATCTTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRPGLWC*PLSSHS
Trigger: GCTATGAGAAGATAGTGGGCAACACCAAAGTCCTGG...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCCCAGGACTTTGGTGTTaGCCACTATCTTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFPGLWC*PLSSHS
Trigger: GCTATGAGAAGATAGTGGGCAACACCAAAGTCCTGG...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTAAAGAGACGATTCTaGCACTGGACTCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKVKRRF*HWTLGC
Trigger: ACATCCCAGAGTCCAGTGGCAGAATCGTCTCTTTAC...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGTCGGATGTAAAGTTCTaGCCCGTGAGGATCATTTGC +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKSDVKF*PVRIIC
Trigger: GCAAATGATCCTCACGGGGCAGAACTTTACATCCGA...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGATCGGATGTAAAGTTCTaGCCCGTGAGGATCATTTGC +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRSDVKF*PVRIIC
Trigger: GCAAATGATCCTCACGGGGCAGAACTTTACATCCGA...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp TGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGGGCACTGAGTCACTTTTACAGGTGTaGGGATATGCTTGTTCCGAT +
Preference number: 4 (lower is better)
Translates to: WVTLTGEPGLTKPTVGTESLLQV*GYACSD
Trigger: ATCGGAACAAGCATATCCGCACACCTGTAAAAGTGA...CTCAGTGCCCACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTTGGGGCTCAGGCTCTTaGTCCGCTGGTAGAGTACGG +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPWGSGS*SAGRVR
Trigger: CCGTACTCTACCAGCGGAGCAAGAGCCTGAGCCCCA...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR GCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCGCTCTGAGAACTCCTTaGCTTCAAAAGGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFALRTP*LQKVQE
Trigger: CTCCTGTACCTTTTGAAGGCAAGGAGTTCTCAGAGC...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTAAGCAAGCCGGAACCTTaGAAAGCATCCAGGTTGTAC +
Preference number: 4 (lower is better)
Translates to: GTGAVSVTWKNERKGWGLSKPEP*KASRLY
Trigger: GTACAACCTGGATGCTTTGCAAGGTTCCGGCTTGCT...TAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp TTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGAGCAAGCCGGAACCTTaGAAAGCATCCAGGTTGTAC +
Preference number: 4 (lower is better)
Translates to: FYLWVTLTGEPGLTKPTVSKPEP*KASRLY
Trigger: GTACAACCTGGATGCTTTGCAAGGTTCCGGCTTGCT...CACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTCTTCTGAGGCCTTCTaGCTACAGACTGTACAGACT +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFSSEAF*LQTVQT
Trigger: AGTCTGTACAGTCTGTAGGCAGAAGGCCTCAGAAGA...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CTGAGCATTTTGCCTTCTATCTGGAGTGCCAAACACACCTGGCCCCACTCCCAGGAAGCTGAGCTACTTTaGTACAATAGCAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LSILPSIWSAKHTWPHSQEAELL*YNSRKA
Trigger: TGCCTTCCTGCTATTGTAGCAAAGTAGCTCAGCTTC...CTGGGAGTGGGGCCAGGTGTGTTTGGCACTCCAGATAGAAGGCAAAATGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGCTTAGAGGATCTTATTaGCTCTTCCCGTACTGGAAA +
Preference number: 4 (lower is better)
Translates to: QRKTRGDWVRSVETVGRKLRGSY*LFPYWK
Trigger: TTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAG...CTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGACCTTGGTTATATCTATaGTGGAAAACTGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGPWLYL*WKTVGV
Trigger: GACACCCACAGTTTTCCAGCATAGATATAACCAAGG...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp TGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGGGCACTGAGAATGCTGTGAGCACCTaGTCTAATGGAAACAACATC +
Preference number: 4 (lower is better)
Translates to: WVTLTGEPGLTKPTVGTENAVST*SNGNNI
Trigger: GATGTTGTTTCCATTAGAGCAGGTGCTCACAGCATT...CTCAGTGCCCACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTGCTGGCGACCTTATGTaGATTCGGCTCTTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFAGDLM*IRLFLV
Trigger: GACCAAGAAGAGCCGAATGCACATAAGGTCGCCAGC...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414705.5
CDS-3UTR CCA 90 bp AACTCCTTGCCTTCAAAAGGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAAGTCCGGAGGGTGGGCTaGCGACCTTATGTGCATTCG +
Preference number: 4 (lower is better)
Translates to: NSLPSKGTGAVSVTWKNEVRRVG*RPYVHS
Trigger: CGAATGCACATAAGGTCGCCAGCCCACCCTCCGGAC...TTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACCTTTTGAAGGCAAGGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTGTCCGGAGGGTGGGCTaGCGACCTTATGTGCATTCG +
Preference number: 4 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGIVRRVG*RPYVHS
Trigger: CGAATGCACATAAGGTCGCCAGCCCACCCTCCGGAC...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTAATCACAGTAGCAAGGGGGCTGTATaGCTTGAGGCCATAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SCICDLEKRTQGLGFNHSSKGAV*LEAIVQ
Trigger: CTGGACTATGGCCTCAAGCCATACAGCCCCCTTGCT...ACTGTGATTAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGATTATTGGCGAGGTTCTaGGGGAATAATGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRLLARF*GNNEQG
Trigger: TCCCTGCTCATTATTCCCCCAGAACCTCGCCAATAA...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTACGAATGCCTCCGCTTaGCACCAGGCGATGAGGAGC +
Preference number: 4 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGITNASA*HQAMRS
Trigger: GCTCCTCATCGCCTGGTGCCAAGCGGAGGCATTCGT...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAAGAACACAAGGCGAGTCCGTaGCGAGGCTGTTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: CPGVSAVHANRNKHICQEHKASP*RGCSGH
Trigger: ATGCCCTGAACAGCCTCGCCACGGACTCGCCTTGTG...TTCTTGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTCAGCGGCCACTCAAGTaGAGGGAGGGATGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPQRPLK*REGCSH
Trigger: GTGACTGCATCCCTCCCTCCACTTGAGTGGCCGCTG...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp AGGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAAAGAGCCTGACTGACTaGACAGCGGCCACTCAAGTG +
Preference number: 4 (lower is better)
Translates to: RSSENKSLTTHSWLFPSEKSLTD*TAATQV
Trigger: CACTTGAGTGGCCGCTGTCCAGTCAGTCAGGCTCTT...TTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGGTATCTCCAGGACTTTaGTGTTGCCCACTATCTTCT +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMVSPGL*CCPLSS
Trigger: AGAAGATAGTGGGCAACACCAAAGTCCTGGAGATAC...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCCCCTCATGTTGTTTTTaGGCTCCAAGGGTATCTCCA +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFPSCCF*APRVSP
Trigger: TGGAGATACCCTTGGAGCCCAAAAACAACATGAGGG...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGACCCTCATGTTGTTTTTaGGCTCCAAGGGTATCTCCA +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRPSCCF*APRVSP
Trigger: TGGAGATACCCTTGGAGCCCAAAAACAACATGAGGG...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp TGCACATGCTTGAGATTCTCCACCGCTTTACGGAAAAGCACTCTGGCTGCTAGGAGACGATTCTGCCACTaGACTCTGGGATGTGAACTC +
Preference number: 4 (lower is better)
Translates to: CTCLRFSTALRKSTLAARRRFCH*TLGCEL
Trigger: GAGTTCACATCCCAGAGTCCAGTGGCAGAATCGTCT...CCTAGCAGCCAGAGTGCTTTTCCGTAAAGCGGTGGAGAATCTCAAGCATGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTTGGTCTTGTCTTTCAACCATaGGCAGCTCGTGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: GFGFLQPVSWALGSRSFGLVFQP*AAREQI
Trigger: GATCTGCTCACGAGCTGCCCATGGTTGAAAGACAAG...ACCAAAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TGCTTTGGTTCCACGAAACGTAATGCCCTAGCCTCGAGCCTAGGAGACCCAAGGTGTCCTTATCCACCGTaGCTTCCATCTCCCAAATTT +
Preference number: 4 (lower is better)
Translates to: CFGSTKRNALASSLGDPRCPYPP*LPSPKF
Trigger: AAATTTGGGAGATGGAAGCCACGGTGGATAAGGACA...CCTTGGGTCTCCTAGGCTCGAGGCTAGGGCATTACGTTTCGTGGAACCAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp CTGAGCATTTTGCCTTCTATCTGGAGTGCCAAACACACCTGGCCCCACTCCCAGTGTCCTTATCCACCGTaGCTTCCATCTCCCAAATTT +
Preference number: 4 (lower is better)
Translates to: LSILPSIWSAKHTWPHSQCPYPP*LPSPKF
Trigger: AAATTTGGGAGATGGAAGCCACGGTGGATAAGGACA...CTGGGAGTGGGGCCAGGTGTGTTTGGCACTCCAGATAGAAGGCAAAATGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGAAGCTTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCAAAAGCATGTTGGGCTaGCTCTTGTCCTTATCCACC +
Preference number: 4 (lower is better)
Translates to: GSFYLWVTLTGEPGLTKPKSMLG*LLSLST
Trigger: GGTGGATAAGGACAAGAGCCAGCCCAACATGCTTTT...GGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAAAAGCATGTTGGGCTaGCTCTTGTCCTTATCCACC +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDKSMLG*LLSLST
Trigger: GGTGGATAAGGACAAGAGCCAGCCCAACATGCTTTT...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGCAACAAAAAGCATGTTaGGCTGGCTCTTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVQQKAC*AGSCPY
Trigger: ATAAGGACAAGAGCCAGCCCAACATGCTTTTTGTTG...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACAAGCAGGGCTGAGCTCTaGCCCTGGGAGCCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTSRAEL*PWEPAC
Trigger: GCACGCCGGCTCCCAGGGCCAGAGCTCAGCCCTGCT...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGCAGTACATGATGTGCTaGAACTCCTGGTGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKQYMMC*NSWWLP
Trigger: CGGAAGCCACCAGGAGTTCCAGCACATCATGTACTG...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCTGTTTTTTTTGGCGGCTCTTTaGCTCGTGGCATTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ALFLYLGRNPPPEALGLFFLAAL*LVAFCC
Trigger: GCAGCAGAATGCCACGAGCCAAAGAGCCGCCAAAAA...AAACAGCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGC
51% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTGGTAATACTTCCTTTTaGTCACTGACCGGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFGNTSF*SLTGGP
Trigger: CGGACCCCCGGTCAGTGACCAAAAGGAAGTATTACC...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp CACACCCACAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGAGGAAACAACTGAATaGCTGAAAAATGAATCCCCC +
Preference number: 4 (lower is better)
Translates to: HTHRGRLGETGCAQWKQLEETTE*LKNESP
Trigger: GGGGGATTCATTTTTCAGCCATTCAGTTGTTTCCTC...CAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTGTGGGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAAGAAGCCTCTGCCCAAGACTaGCTCACTGAGGCGTCTTGG +
Preference number: 4 (lower is better)
Translates to: CPGVSAVHANRNKHICQEASAQD*LTEASW
Trigger: CCAAGACGCCTCAGTGAGCCAGTCTTGGGCAGAGGC...TTCTTGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp CAAGATGTCCAGGATGCTAAGCTTGTCCCAACAGCCATAGCCTCGGTCTGCTCAGCAGGGAGTTTATTCTaGTCAGCCAACAGCTGCATA +
Preference number: 4 (lower is better)
Translates to: QDVQDAKLVPTAIASVCSAGSLF*SANSCI
Trigger: TATGCAGCTGTTGGCTGACCAGAATAAACTCCCTGC...TGAGCAGACCGAGGCTATGGCTGTTGGGACAAGCTTAGCATCCTGGACATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR CAA 72 bp GCACCACCATGTTGGAGAGACCTGTTTGTTGGAGAATaGGTTTTCTCTCCTCTGAGGGCTGTAGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: APPCWRDLFVGE*VFSPLRAVEAR
Trigger: TCTGGCCTCTACAGCCCTCAGAGGAGAGAAAACCAATTCTCCAACAAACAGGTCTCTCCAACATGGTGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTTGTTCAGGGCATCCATaGTCACGGCAGAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPCSGHP*SRQSQP
Trigger: TGGCTGGCTCTGCCGTGATCATGGATGCCCTGAACA...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR TCA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGCTCCAGTTGGAGCTTTaGCAGCCCCTCGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLLQLEL*QPLGCL
Trigger: AAGGCAGCCGAGGGGCTGTCAAAGCTCCAACTGGAG...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp GTGCGGATAGGTCTTCAGGGGCAGAAGGGATCTTTAAATAGGTTCAGGTCAAATTTAGTGCCCATACATTaGTCCGCGTGTGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: VRIGLQGQKGSLNRFRSNLVPIH*SACGLR
Trigger: CCGGAGTCCACACGCGGATCAATGTATGGGCACTAA...ATTTGACCTGAACCTATTTAAAGATCCCTTCTGCCCCTGAAGACCTATCCGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACTTCCTTTGGTTGCTCTaGGAACTCCTTGCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDFLWLL*ELLAFK
Trigger: TTTGAAGGCAAGGAGTTCTCAGAGCAACCAAAGGAA...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTTAAATGCACATGCTTaGGATTCTCCACCGCTTTAC +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVLNAHA*DSPPLY
Trigger: GTAAAGCGGTGGAGAATCTCAAGCATGTGCATTTAA...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp CTGAGCATTTTGCCTTCTATCTGGAGTGCCAAACACACCTGGCCCCACTCCCAGAAACAACTGAATGGCTaGAAAATGAATCCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: LSILPSIWSAKHTWPHSQKQLNG*KMNPPL
Trigger: AAGCGGGGGATTCATTTTTCAGCCATTCAGTTGTTT...CTGGGAGTGGGGCCAGGTGTGTTTGGCACTCCAGATAGAAGGCAAAATGCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGAGATGGCCCACAGTGGGCACTaGGTGGCCATGACTTTCTTC +
Preference number: 4 (lower is better)
Translates to: EQEKGDSFFHKAIPSPEMAHSGH*VAMTFF
Trigger: GAAGAAAGTCATGGCCACTCAGTGCCCACTGTGGGC...CATCTCAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp TGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAAGAAACGCGTACAGGAGGTTaGGCTACCAGGAGGCCGTTT +
Preference number: 4 (lower is better)
Translates to: CPGVSAVHANRNKHICQETRTGG*ATRRPF
Trigger: AAACGGCCTCCTGGTAGCTCAACCTCCTGTACGCGT...TTCTTGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp TGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAAGAACCAAGACTGGCTCACTaGGGCGTCTTGGCTACTGGA +
Preference number: 4 (lower is better)
Translates to: CPGVSAVHANRNKHICQEPRLAH*GVLATG
Trigger: TCCAGTAGCCAAGACGCCTCAGTGAGCCAGTCTTGG...TTCTTGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp CAAGATGTCCAGGATGCTAAGCTTGTCCCAACAGCCATAGCCTCGGTCTGCTCATCCATCTCCCAAATTTaGTGTCCATCTGTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: QDVQDAKLVPTAIASVCSSISQI*CPSVVF
Trigger: GAAGACCACAGATGGACAGCAAATTTGGGAGATGGA...TGAGCAGACCGAGGCTATGGCTGTTGGGACAAGCTTAGCATCCTGGACATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACTCCATCTCCCAAATTTaGTGTCCATCTGTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDSISQI*CPSVVF
Trigger: GAAGACCACAGATGGACAGCAAATTTGGGAGATGGA...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGTCACTTTTACAGGTGTaGGGATATGCTTGTTCCGAT +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMSLLQV*GYACSD
Trigger: ATCGGAACAAGCATATCCGCACACCTGTAAAAGTGA...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTCACTTTTACAGGTGTaGGGATATGCTTGTTCCGAT +
Preference number: 4 (lower is better)
Translates to: VASSLSESPLSAHTLIRVSLLQV*GYACSD
Trigger: ATCGGAACAAGCATATCCGCACACCTGTAAAAGTGA...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCAGCCCCGTGCGGAACTaGTGGCAGGGAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSSPVRN*WQGAMV
Trigger: CACCATGGCTCCCTGCCAGCAGTTCCGCACGGGGCT...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTCGCAGTACATGATGTaGTGGAACTCCTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFSQYMM*WNSWWL
Trigger: AAGCCACCAGGAGTTCCAGCACATCATGTACTGCGA...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR GCA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCTGGTGGTGCCTGGTaGGAAATTCTCGCAGTACAT +
Preference number: 4 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKSGGAW*EILAVH
Trigger: ATGTACTGCGAGAATTTCGCACCAGGCACCACCAGA...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTCTGGTGGTGCCTGGTaGGAAATTCTCGCAGTACAT +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFSGGAW*EILAVH
Trigger: ATGTACTGCGAGAATTTCGCACCAGGCACCACCAGA...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR GCA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGGGCCAGGTCTGGTGGTaGCTGGTGCGAAATTCTCGC +
Preference number: 4 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLGQVWW*LVRNSR
Trigger: GCGAGAATTTCGCACCAGGCACCACCAGACCTGGCC...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp CGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTCTTTTGGTCAGCAGGTaGTTACTATTTGGACGGAAC +
Preference number: 4 (lower is better)
Translates to: RGFWVSSACKLGSWVTFLLLVSR*LLFGRN
Trigger: GTTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAG...AAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GGAAGCTTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCCTTTTGGTCAGCAGGTaGTTACTATTTGGACGGAAC +
Preference number: 4 (lower is better)
Translates to: GSFYLWVTLTGEPGLTKPLLVSR*LLFGRN
Trigger: GTTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAG...GGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp AGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTAATCACAGTTCCAGGTTGTACAGCTaGAGCAGACAGGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SCICDLEKRTQGLGFNHSSRLYS*SRQVLA
Trigger: AGCAAGCACCTGTCTGCTGCAGCTGTACAACCTGGA...ACTGTGATTAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGACTTCTTTTCTTGGTTaGTTTAGCCCTTCTGCTATT +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWTSFLG*FSPSAI
Trigger: AATAGCAGAAGGGCTAAAGCAACCAAGAAAAGAAGT...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp AGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTAATCACAGTTATCGACCGACAGGTTaGATACAAGTGCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: SCICDLEKRTQGLGFNHSYRPTG*IQVHRP
Trigger: GGGCCTGTGCACTTGTATGCAACCTGTCGGTCGATA...ACTGTGATTAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTGAAGCTGAGCTACTTTaGTACAATAGCAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RGFWVSSACKLGSWVTFLEAELL*YNSRKA
Trigger: TGCCTTCCTGCTATTGTAGCAAAGTAGCTCAGCTTC...AAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGCTTAGAGGATCTTATTaGCTCTTCCCGTACTGGAAA +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMLRGSY*LFPYWK
Trigger: TTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAG...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTCATAGTCGAAGAGGATaGAGAAGTCAAGCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: RGFWVSSACKLGSWVTFLHSRRG*RSQARL
Trigger: AAGACGAGCTTGACTTCTCCATCCTCTTCGACTATG...AAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp GTGCGGATAGGTCTTCAGGGGCAGAAGGGATCTTTAAATAGGTTCAGGTCAAATAGCAAGGGGGCTGTATaGCTTGAGGCCATAGTCCAG +
Preference number: 4 (lower is better)
Translates to: VRIGLQGQKGSLNRFRSNSKGAV*LEAIVQ
Trigger: CTGGACTATGGCCTCAAGCCATACAGCCCCCTTGCT...ATTTGACCTGAACCTATTTAAAGATCCCTTCTGCCCCTGAAGACCTATCCGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTATTATTGGCGAGGTTCTaGGGGAATAATGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GTGAVSVTWKNERKGWGLLLARF*GNNEQG
Trigger: TCCCTGCTCATTATTCCCCCAGAACCTCGCCAATAA...TAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACCAGGCACCAGCGGCTTaGGCCAAGTGGGCGGAACCA +
Preference number: 4 (lower is better)
Translates to: EIYYIQQHGRPVRVLHIYQAPAA*AKWAEP
Trigger: TGGTTCCGCCCACTTGGCCCAAGCCGCTGGTGCCTG...GTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAGTATCTCCAGGACTTTaGTGTTGCCCACTATCTTCT +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRVSPGL*CCPLSS
Trigger: AGAAGATAGTGGGCAACACCAAAGTCCTGGAGATAC...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTCTGCCACTGGACTCTaGGATGTGAACTCGGAAAAC +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFSATGL*DVNSEN
Trigger: GTTTTCCGAGTTCACATCCCAGAGTCCAGTGGCAGA...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTTGGTAAAAGCATGTTGGGCTaGCTCTTGTCCTTATCCACC +
Preference number: 4 (lower is better)
Translates to: GFGFLQPVSWALGSRSFGKSMLG*LLSLST
Trigger: GGTGGATAAGGACAAGAGCCAGCCCAACATGCTTTT...ACCAAAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGCAACAAAAAGCATGTTaGGCTGGCTCTTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMQQKAC*AGSCPY
Trigger: ATAAGGACAAGAGCCAGCCCAACATGCTTTTTGTTG...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAGGCTGCAGATCAGAGTaGGGTCATATTCATCCGTGG +
Preference number: 4 (lower is better)
Translates to: RLSWGICSTCKQKQTHLPGCRSE*GHIHPW
Trigger: CCACGGATGAATATGACCCCACTCTGATCTGCAGCC...TGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp ACAATACAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTGCTGGCAGGGAGCCATaGTGGCCACGAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TIQEDLQTLEIYYIQQHGAGREP*WPRGRR
Trigger: CCTCCTGCCTCGTGGCCACCATGGCTCCCTGCCAGC...ACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CATATTTACATTAACTTAGATGTAGCAGTGCAAACCTTCACTCAACTGAGATCCCCCGTGCGGAACTGCTaGCAGGGAGCCATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: HIYINLDVAVQTFTQLRSPVRNC*QGAMVA
Trigger: GGCCACCATGGCTCCCTGCCAGCAGTTCCGCACGGG...GGATCTCAGTTGAGTGAAGGTTTGCACTGCTACATCTAAGTTAATGTAAATATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGTTTACGTCTGATTTCTaGCAGGAGGTCCTGAAAACT +
Preference number: 4 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMFTSDF*QEVLKT
Trigger: AGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAA...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp AGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTAATCACAGTAACGAACGCAAGGGCTaGGGTTTAATCACAGTGCCC +
Preference number: 4 (lower is better)
Translates to: SCICDLEKRTQGLGFNHSNERKG*GLITVP
Trigger: GGGCACTGTGATTAAACCCCAGCCCTTGCGTTCGTT...ACTGTGATTAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTTGTAAGCTGGGCTCTTaGGTCACGTTCCTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFCKLGS*VTFLWL
Trigger: CAACCAAAGGAACGTGACCCAAGAGCCCAGCTTACA...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371564.8
CDS-3UTR CCA 90 bp GGAAGCTTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCCTCTATCGAGGGTTTTaGGTTTCTTCAGCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: GSFYLWVTLTGEPGLTKPLYRGF*VSSACK
Trigger: CTTACAGGCTGAAGAAACCCAAAACCCTCGATAGAG...GGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CACACCCACAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGACCTCCAGAAGCACTTaGGCTGTTTTACTTAACAAA +
Preference number: 4 (lower is better)
Translates to: HTHRGRLGETGCAQWKQLTSRST*AVLLNK
Trigger: TTTGTTAAGTAAAACAGCCCAAGTGCTTCTGGAGGT...CAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTGTGGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGAGAAAATCCCCCGCTTGTCCTaGGGTATCTGCAGTACATGC +
Preference number: 4 (lower is better)
Translates to: LTTHSWLFPSEVNIAGEKIPRLS*GICSTC
Trigger: GCATGTACTGCAGATACCCCAGGACAAGCGGGGGAT...TTTCTCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTGAGCATTTTGCCTTCTATCTGGAGTGCCAAACACACCTGGCCCCACTCCCAGTACTTGCTATGCAATTaGCTGCTTTGGTTCCACGAA +
Preference number: 4 (lower is better)
Translates to: LSILPSIWSAKHTWPHSQYLLCN*LLWFHE
Trigger: TTCGTGGAACCAAAGCAGCCAATTGCATAGCAAGTA...CTGGGAGTGGGGCCAGGTGTGTTTGGCACTCCAGATAGAAGGCAAAATGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTGACTTGGCGCGTGTTTaGAAAGGGGGATCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFDLARV*KGGSVC
Trigger: ACAAACAGATCCCCCTTTCCAAACACGCGCCAAGTC...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609507.1
CDS-3UTR CCA 90 bp CAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGAGGGCACGGGGACTTaGCGCGTGTTTGGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: QEDLQTLEIYYIQQHGRPEGTGT*RVFGKG
Trigger: CCCCTTTCCAAACACGCGCCAAGTCCCCGTGCCCTC...AGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609943.5
3UTR CAA 72 bp TCCCACTTAGAGGGAATTCAGCCCTTTTCCTCTATCTaGGTAGAAACCCACCTCCAGAAGCACTTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SHLEGIQPFSSI*VETHLQKHLGC
Trigger: ACAGCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAATTCCCTCTAAGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGGGGGGCTGTATGGCTTaGGGCCATAGTCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLGGCMA*GHSPGH
Trigger: ATGTCCTGGACTATGGCCTCAAGCCATACAGCCCCC...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp AAAGCATACAGGAGTTATCTACCAGGATTTAGATTTGGTCCCTTCTGTAAATATTCCTGGGGTGCCACGTaGGATGAGGGCTGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: KAYRSYLPGFRFGPFCKYSWGAT*DEGCGE
Trigger: CTCGCCGCAGCCCTCATCTCACGTGGCACCCCAGGA...ATATTTACAGAAGGGACCAAATCTAAATCCTGGTAGATAACTCCTGTATGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp TGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAAGAACATTCTGCTGCTGAATaGCTGTGGGGTAGGAACCCG +
Preference number: 4 (lower is better)
Translates to: CPGVSAVHANRNKHICQEHSAAE*LWGRNP
Trigger: CGGGTTCCTACCCCACAGTCATTCAGCAGCAGAATG...TTCTTGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTCATTCTGCTGCTGAATaGCTGTGGGGTAGGAACCCG +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPHSAAE*LWGRNP
Trigger: CGGGTTCCTACCCCACAGTCATTCAGCAGCAGAATG...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR TCA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGGGTCAAATTAACCAGTaGAGCTGGGAAGCACATCCT +
Preference number: 4 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKGQINQ*SWEAHP
Trigger: AGGATGTGCTTCCCAGCTTCACTGGTTAATTTGACC...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACCTTCATGTTAGAATTTaGGTGCGGATAGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDLHVRI*VRIGLQ
Trigger: CTGAAGACCTATCCGCACTCAAATTCTAACATGAAG...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GTGCGGATAGGTCTTCAGGGGCAGAAGGGATCTTTAAATAGGTTCAGGTCAAATGCCATGACTTTCTTCTaGGGCCTTCTGCCTACAGAC +
Preference number: 4 (lower is better)
Translates to: VRIGLQGQKGSLNRFRSNAMTFF*GLLPTD
Trigger: GTCTGTAGGCAGAAGGCCTCAGAAGAAAGTCATGGC...ATTTGACCTGAACCTATTTAAAGATCCCTTCTGCCCCTGAAGACCTATCCGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGGCACTGAGTGGCCATaGCTTTCTTCTGAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGGTEWP*LSSEAF
Trigger: GAAGGCCTCAGAAGAAAGTCATGGCCACTCAGTGCC...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTATTGGCTTTTCCCCAGTaGAGTCAATATTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GTGAVSVTWKNERKGWGLLAFPQ*SQYCWR
Trigger: TCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAA...TAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCGCGCTCAGAAACTTCTaGGGCCCTACCCTATCCGGC +
Preference number: 4 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVALRNF*GPTLSG
Trigger: GCCGGATAGGGTAGGGCCGCAGAAGTTTCTGAGCGC...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp ACAATACAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTGCGGAGGGGCCCCACTaGCTGGATCAGTTCGTGGGA +
Preference number: 4 (lower is better)
Translates to: TIQEDLQTLEIYYIQQHGAEGPH*LDQFVG
Trigger: TCCCACGAACTGATCCAGGCAGTGGGGCCCCTCCGC...ACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGAGAAAATGCAGTCACTGGGATaGTGCAGATGGGAATGGCAG +
Preference number: 4 (lower is better)
Translates to: LTTHSWLFPSEVNIAGEKMQSLG*CRWEWQ
Trigger: CTGCCATTCCCATCTGCAGCATCCCAGTGACTGCAT...TTTCTCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp AATGAATCCCCCGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAAATGCAGTCACTGGGATaGTGCAGATGGGAATGGCAG +
Preference number: 4 (lower is better)
Translates to: NESPACPGVSAVHANRNKMQSLG*CRWEWQ
Trigger: CTGCCATTCCCATCTGCAGCATCCCAGTGACTGCAT...TTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCGGGGGATTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACTCACTTTTACAGGTGTaGGGATATGCTTGTTCCGAT +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDSLLQV*GYACSD
Trigger: ATCGGAACAAGCATATCCGCACACCTGTAAAAGTGA...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCATCACAGGCGAGGCCTaGTGGTTGGTCGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSITGEA*WLVGEG
Trigger: CCCCTCTCCGACCAACCAGCAGGCCTCGCCTGTGAT...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGATACAGAAGGTGTCTTaGTATAATGGCTTCTTTTAC +
Preference number: 4 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWIQKVS*YNGFFY
Trigger: GTAAAAGAAGCCATTATAGCAAGACACCTTCTGTAT...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp TGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGGGCACTGAGACTTCTTTTCTTGGTTaGTTTAGCCCTTCTGCTATT +
Preference number: 4 (lower is better)
Translates to: WVTLTGEPGLTKPTVGTETSFLG*FSPSAI
Trigger: AATAGCAGAAGGGCTAAAGCAACCAAGAAAAGAAGT...CTCAGTGCCCACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp TGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAAGAACTAGGGGAGACTGGGTaGGCTCAGTGGAAACAGTTG +
Preference number: 4 (lower is better)
Translates to: CPGVSAVHANRNKHICQELGETG*AQWKQL
Trigger: CAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAG...TTCTTGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAGGTATCTGCAGTACATaGAAACAGAAACAAACACAT +
Preference number: 4 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGGICST*KQKQTH
Trigger: ATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACC...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGGGTATCTGCAGTACATaGAAACAGAAACAAACACAT +
Preference number: 4 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVGICST*KQKQTH
Trigger: ATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACC...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTGCCTTCTATCTGGAGTaGCAAACACACCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGIAFYLE*QTHLAP
Trigger: TGGGGCCAGGTGTGTTTGGCACTCCAGATAGAAGGC...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACTACCAACTTCCAATCTaGCTAAATGTGACAGCCTCT +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDYQLPI*LNVTAS
Trigger: AGAGGCTGTCACATTTAGGCAGATTGGAAGTTGGTA...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp GAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGAGATGGCCATAGCCTCGGTCTaGTCAGGCCAATCAGAATGC +
Preference number: 4 (lower is better)
Translates to: EQEKGDSFFHKAIPSPEMAIASV*SGQSEC
Trigger: GCATTCTGATTGGCCTGAGCAGACCGAGGCTATGGC...CATCTCAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp GTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATAGCCATAGCCTCGGTCTaGTCAGGCCAATCAGAATGC +
Preference number: 4 (lower is better)
Translates to: VRTNHSPHTLGFSPVKSIAIASV*SGQSEC
Trigger: GCATTCTGATTGGCCTGAGCAGACCGAGGCTATGGC...TATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp CTGTCTCATGTAGAATGTGCTTTTGGTCAGCAGGTGCTTACTATTTGGACGGAAAGCAAGGGGGCTGTATaGCTTGAGGCCATAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LSHVECAFGQQVLTIWTESKGAV*LEAIVQ
Trigger: CTGGACTATGGCCTCAAGCCATACAGCCCCCTTGCT...TTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAGCACATTCTACATGAGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATAGCCTGGATCAGTTCGTaGGACGGAGTGATCTCGATC +
Preference number: 4 (lower is better)
Translates to: VRTNHSPHTLGFSPVKSIAWISS*DGVISI
Trigger: GATCGAGATCACTCCGTCCCACGAACTGATCCAGGC...TATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AATGAATCCCCCGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAATGTCCTCGGCGAGGCTaGTTCGAGGTGACATTATTG +
Preference number: 4 (lower is better)
Translates to: NESPACPGVSAVHANRNKCPRRG*FEVTLL
Trigger: CAATAATGTCACCTCGAACCAGCCTCGCCGAGGACA...TTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCGGGGGATTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTGTCTCATGTAGAATGTGCTTTTGGTCAGCAGGTGCTTACTATTTGGACGGAAAAGAGCCTGACTGACTaGACAGCGGCCACTCAAGTG +
Preference number: 4 (lower is better)
Translates to: LSHVECAFGQQVLTIWTEKSLTD*TAATQV
Trigger: CACTTGAGTGGCCGCTGTCCAGTCAGTCAGGCTCTT...TTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAGCACATTCTACATGAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTCCCTCATGTTGTTTTTaGGCTCCAAGGGTATCTCCA +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFPSCCF*APRVSP
Trigger: TGGAGATACCCTTGGAGCCCAAAAACAACATGAGGG...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTAAAAGCATGTTGGGCTaGCTCTTGTCCTTATCCACC +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFKSMLG*LLSLST
Trigger: GGTGGATAAGGACAAGAGCCAGCCCAACATGCTTTT...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCCAACAAAAAGCATGTTaGGCTGGCTCTTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFQQKAC*AGSCPY
Trigger: ATAAGGACAAGAGCCAGCCCAACATGCTTTTTGTTG...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACCAACAAAAAGCATGTTaGGCTGGCTCTTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDQQKAC*AGSCPY
Trigger: ATAAGGACAAGAGCCAGCCCAACATGCTTTTTGTTG...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGAGAAACTTGATGGCTGGGACTaGGTGGTAGGTAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LTTHSWLFPSEVNIAGEKLDGWD*VVGKVL
Trigger: CAGCACTTTACCTACCACCCAGTCCCAGCCATCAAG...TTTCTCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACTTGGTCGGAGAGGGGTaGAGCAGGGCTGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: EIYYIQQHGRPVRVLHIYLVGEG*SRAELW
Trigger: CCAGAGCTCAGCCCTGCTCCACCCCTCTCCGACCAA...GTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTGCAGCTGCTGGTTGGTaGGTGAGTAGTGGATCACAG +
Preference number: 4 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGIAAAGW*VSSGSQ
Trigger: CTGTGATCCACTACTCACCCACCAACCAGCAGCTGC...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATAGCAGCTGCTGGTTGGTaGGTGAGTAGTGGATCACAG +
Preference number: 4 (lower is better)
Translates to: VRTNHSPHTLGFSPVKSIAAAGW*VSSGSQ
Trigger: CTGTGATCCACTACTCACCCACCAACCAGCAGCTGC...TATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AATGAATCCCCCGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAAGGTAATACTTCCTTTTaGTCACTGACCGGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: NESPACPGVSAVHANRNKGNTSF*SLTGGP
Trigger: CGGACCCCCGGTCAGTGACCAAAAGGAAGTATTACC...TTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCGGGGGATTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGTTTACGTCTGATTTCTaGCAGGAGGTCCTGAAAACT +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKFTSDF*QEVLKT
Trigger: AGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAA...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CCA 90 bp CGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAGCTGTATCTGTGACCTaGAAAAACGAACGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: RLSWGICSTCKQKQTHLPAVSVT*KNERKG
Trigger: GCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGC...TGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAACAGGTGATCTTGTCTaGGCAAGACAGTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRTGDLV*ARQFGF
Trigger: AAAACCAAACTGTCTTGCCCAGACAAGATCACCTGT...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAAAACCTCCAGAAGCACTTaGGCTGTTTTACTTAACAAA +
Preference number: 4 (lower is better)
Translates to: GRLGETGCAQWKQLGGRKTSRST*AVLLNK
Trigger: TTTGTTAAGTAAAACAGCCCAAGTGCTTCTGGAGGT...TTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AACTCCTTGCCTTCAAAAGGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAAAAGGTTAAGATGCGCTaGGTCACCGAGCACCTTGCC +
Preference number: 4 (lower is better)
Translates to: NSLPSKGTGAVSVTWKNEKVKMR*VTEHLA
Trigger: GGCAAGGTGCTCGGTGACCCAGCGCATCTTAACCTT...TTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACCTTTTGAAGGCAAGGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp CTGTCTCATGTAGAATGTGCTTTTGGTCAGCAGGTGCTTACTATTTGGACGGAAGAGGCTGGTTCGAGGTaGCATTATTGGCGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LSHVECAFGQQVLTIWTEEAGSR*HYWRGS
Trigger: AGAACCTCGCCAATAATGTCACCTCGAACCAGCCTC...TTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAGCACATTCTACATGAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTGAGGCTGGTTCGAGGTaGCATTATTGGCGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPEAGSR*HYWRGS
Trigger: AGAACCTCGCCAATAATGTCACCTCGAACCAGCCTC...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR TCA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTGAGGCTGGTTCGAGGTaGCATTATTGGCGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGIEAGSR*HYWRGS
Trigger: AGAACCTCGCCAATAATGTCACCTCGAACCAGCCTC...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACCAGCTCGTAAGAGCCTaGCTGACTGGACAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: EIYYIQQHGRPVRVLHIYQLVRA*LTGQRP
Trigger: TGGCCGCTGTCCAGTCAGTCAGGCTCTTACGAGCTG...GTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp TGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAAGAACTGGACTCTGGGATGTaGACTCGGAAAACCAGTCTC +
Preference number: 4 (lower is better)
Translates to: CPGVSAVHANRNKHICQELDSGM*TRKTSL
Trigger: GAGACTGGTTTTCCGAGTTCACATCCCAGAGTCCAG...TTCTTGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp TACTTTCTCATTCTCTTAGAGGATCTTATTGCCTCTTCCCGTACTGGAAATATTACCATGGGCAGCTCGTaGGCAGATCGCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: YFLILLEDLIASSRTGNITMGSS*ADRWEH
Trigger: GTGCTCCCAGCGATCTGCTCACGAGCTGCCCATGGT...AATATTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAGAGAATGAGAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTAGAAGTCTTAACAGGTaGTCTTGTCTGGGCAAGACA +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFRSLNR*SCLGKT
Trigger: TGTCTTGCCCAGACAAGATCACCTGTTAAGACTTCT...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371564.8
CDS-3UTR TCA 90 bp GGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTATTAAATGCACATGCTTaGGATTCTCCACCGCTTTAC +
Preference number: 4 (lower is better)
Translates to: GTGAVSVTWKNERKGWGLLNAHA*DSPPLY
Trigger: GTAAAGCGGTGGAGAATCTCAAGCATGTGCATTTAA...TAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp TTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGCTTCATGTTAGAATTTaGGTGCGGATAGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: FYLWVTLTGEPGLTKPTVLHVRI*VRIGLQ
Trigger: CTGAAGACCTATCCGCACTCAAATTCTAACATGAAG...CACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp CTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGAGAAAGCACAGGCCCGAATCTaGGCATTTTGCCTTCTATCT +
Preference number: 4 (lower is better)
Translates to: LTTHSWLFPSEVNIAGEKAQARI*AFCLLS
Trigger: AGATAGAAGGCAAAATGCTCAGATTCGGGCCTGTGC...TTTCTCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTTGGTAAACCTTCACTCAACTaGGATCCTTCTAACACACGT +
Preference number: 4 (lower is better)
Translates to: GFGFLQPVSWALGSRSFGKPSLN*DPSNTR
Trigger: ACGTGTGTTAGAAGGATCTCAGTTGAGTGAAGGTTT...ACCAAAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp AGGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTGAGTGAGGTTCTTTaGCAAGATGTCCAGGATGCT +
Preference number: 4 (lower is better)
Translates to: RSSENKSLTTHSWLFPSEVSEVL*QDVQDA
Trigger: AGCATCCTGGACATCTTGTCAAAGAACCTCACTCAC...TTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp GAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGAGATGGGCCAGAGGGGTGAGTaGGGTTCTTTGACAAGATGT +
Preference number: 4 (lower is better)
Translates to: EQEKGDSFFHKAIPSPEMGQRGE*GSLTRC
Trigger: ACATCTTGTCAAAGAACCTCACTCACCCCTCTGGCC...CATCTCAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp GTGCGGATAGGTCTTCAGGGGCAGAAGGGATCTTTAAATAGGTTCAGGTCAAATGCTGGCGACCTTATGTaGATTCGGCTCTTCTTCGTT +
Preference number: 4 (lower is better)
Translates to: VRIGLQGQKGSLNRFRSNAGDLM*IRLFFV
Trigger: AACGAAGAAGAGCCGAATGCACATAAGGTCGCCAGC...ATTTGACCTGAACCTATTTAAAGATCCCTTCTGCCCCTGAAGACCTATCCGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTTCCATCTCCCAAATTTaGTGTCCATCTGTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFSISQI*CPSVVF
Trigger: GAAGACCACAGATGGACAGCAAATTTGGGAGATGGA...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR GCA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCCATCTCCCAAATTTaGTGTCCATCTGTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKSISQI*CPSVVF
Trigger: GAAGACCACAGATGGACAGCAAATTTGGGAGATGGA...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp TGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAAGAAAGCTCCAGGGCTAGGTaGCCTGGTCAGCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: CPGVSAVHANRNKHICQESSRAR*PGQPFK
Trigger: TTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCT...TTCTTGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGTCAATTAAATGCACATaGTTGAGATTCTCCACCGCT +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKSIKCT*LRFSTA
Trigger: AGCGGTGGAGAATCTCAAGCATGTGCATTTAATTGA...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp AGTTTCTGTCTCTATCGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTCTTCTGAGGCCTTCTaGCTACAGACTGTACAGACT +
Preference number: 4 (lower is better)
Translates to: SFCLYRGFWVSSACKLGSSSEAF*LQTVQT
Trigger: AGTCTGTACAGTCTGTAGGCAGAAGGCCTCAGAAGA...AGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCGATAGAGACAGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp TGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGGGCACTGAGGTAGACCTGTCAGAGTaGTACATATTTACATTAACT +
Preference number: 4 (lower is better)
Translates to: WVTLTGEPGLTKPTVGTEVDLSE*YIFTLT
Trigger: AGTTAATGTAAATATGTAGCACTCTGACAGGTCTAC...CTCAGTGCCCACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp ATTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGACCCAAGGTTAAGATaGGCTGGGTCACCGAGCACC +
Preference number: 4 (lower is better)
Translates to: ILEQEKGDSFFHKAIPSPDPRLR*AGSPST
Trigger: GGTGCTCGGTGACCCAGCGCATCTTAACCTTGGGTC...AGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp ATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCTGCTATGCAATTGGCTaGTTTGGTTCCACGAAACGT +
Preference number: 4 (lower is better)
Translates to: IQPFSSILVETHLQKHLGCYAIG*FGSTKR
Trigger: ACGTTTCGTGGAACCAAAGCAGCCAATTGCATAGCA...GCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp GGAAGCTTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCGGAAAATACTTGCTATaGAATTGGCTGCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GSFYLWVTLTGEPGLTKPGKYLL*NWLLWF
Trigger: GAACCAAAGCAGCCAATTGCATAGCAAGTATTTTCC...GGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp TTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGAATGCTGTGAGCACCTaGTCTAATGGAAACAACATC +
Preference number: 4 (lower is better)
Translates to: FYLWVTLTGEPGLTKPTVNAVST*SNGNNI
Trigger: GATGTTGTTTCCATTAGAGCAGGTGCTCACAGCATT...CACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTCATAGTCGAAGAGGATaGAGAAGTCAAGCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFHSRRG*RSQARL
Trigger: AAGACGAGCTTGACTTCTCCATCCTCTTCGACTATG...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000610033.5
CDS-3UTR CCA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCAGGCCCCTGCTGGCTTaGCCGCGCTCAGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSRPLLA*PRSETS
Trigger: AGAAGTTTCTGAGCGCGGCCAAGCCAGCAGGGGCCT...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACCACAAGGCGAGTCCGTaGCGAGGCTGTTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: EIYYIQQHGRPVRVLHIYHKASP*RGCSGH
Trigger: ATGCCCTGAACAGCCTCGCCACGGACTCGCCTTGTG...GTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGACAGCAGGATGGATTCTaGAGCCGAGTTTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGQQDGF*SRVSPL
Trigger: GAGAGGAGAAACTCGGCTCCAGAATCCATCCTGCTG...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGAGATGCAGCAGGATGGATTCTaGAGCCGAGTTTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: EQEKGDSFFHKAIPSPEMQQDGF*SRVSPL
Trigger: GAGAGGAGAAACTCGGCTCCAGAATCCATCCTGCTG...CATCTCAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTCAGCAGGATGGATTCTaGAGCCGAGTTTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPQQDGF*SRVSPL
Trigger: GAGAGGAGAAACTCGGCTCCAGAATCCATCCTGCTG...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCCTGGGATGCTGCAGATaGGAATGGCAGGCACCAGCG +
Preference number: 4 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSLGCCR*EWQAPA
Trigger: CGCTGGTGCCTGCCATTCCCATCTGCAGCATCCCAG...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AGAGGGAATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACCCTCATGTTGTTTTTaGGCTCCAAGGGTATCTCCA +
Preference number: 4 (lower is better)
Translates to: RGNSALFLYLGRNPPPEAPSCCF*APRVSP
Trigger: TGGAGATACCCTTGGAGCCCAAAAACAACATGAGGG...TGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAATTCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTGTCCTTATCCACCGTaGCTTCCATCTCCCAAATTT +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFCPYPP*LPSPKF
Trigger: AAATTTGGGAGATGGAAGCCACGGTGGATAAGGACA...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTTGTCCTTATCCACCGTaGCTTCCATCTCCCAAATTT +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFCPYPP*LPSPKF
Trigger: AAATTTGGGAGATGGAAGCCACGGTGGATAAGGACA...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTCTTGATGGCTGGGACTaGGTGGTAGGTAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPLDGWD*VVGKVL
Trigger: CAGCACTTTACCTACCACCCAGTCCCAGCCATCAAG...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTCTTGATGGCTGGGACTaGGTGGTAGGTAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGILDGWD*VVGKVL
Trigger: CAGCACTTTACCTACCACCCAGTCCCAGCCATCAAG...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AACTCCTTGCCTTCAAAAGGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAACTCCGTCTTGATGGCTaGGACTGGGTGGTAGGTAAA +
Preference number: 4 (lower is better)
Translates to: NSLPSKGTGAVSVTWKNELRLDG*DWVVGK
Trigger: TTTACCTACCACCCAGTCCCAGCCATCAAGACGGAG...TTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACCTTTTGAAGGCAAGGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTCTCCGTCTTGATGGCTaGGACTGGGTGGTAGGTAAA +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPLRLDG*DWVVGK
Trigger: TTTACCTACCACCCAGTCCCAGCCATCAAGACGGAG...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATAGGCTGCAGATCAGAGTaGGGTCATATTCATCCGTGG +
Preference number: 4 (lower is better)
Translates to: VRTNHSPHTLGFSPVKSIGCRSE*GHIHPW
Trigger: CCACGGATGAATATGACCCCACTCTGATCTGCAGCC...TATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTCAGTACATGATGTGCTaGAACTCCTGGTGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGIQYMMC*NSWWLP
Trigger: CGGAAGCCACCAGGAGTTCCAGCACATCATGTACTG...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTGTCTCATGTAGAATGTGCTTTTGGTCAGCAGGTGCTTACTATTTGGACGGAACAGTACATGATGTGCTaGAACTCCTGGTGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: LSHVECAFGQQVLTIWTEQYMMC*NSWWLP
Trigger: CGGAAGCCACCAGGAGTTCCAGCACATCATGTACTG...TTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAGCACATTCTACATGAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTCAGTACATGATGTGCTaGAACTCCTGGTGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPQYMMC*NSWWLP
Trigger: CGGAAGCCACCAGGAGTTCCAGCACATCATGTACTG...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTAGGTCTGGTGGTGCCTaGTGCGAAATTCTCGCAGTA +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPRSGGA*CEILAV
Trigger: TACTGCGAGAATTTCGCACCAGGCACCACCAGACCT...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GCTATACATATTATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTGCAACCGGGGGTCCGTTTTTaGCGGCTCTTTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: AIHIIKQQHLCTIQEDLQPGVRF*RLFGSW
Trigger: CCACGAGCCAAAGAGCCGCCAAAAACGGACCCCCGG...TTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGATAATATGTATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TGCACATGCTTGAGATTCTCCACCGCTTTACGGAAAAGCACTCTGGCTGCTAGGTTTACGTCTGATTTCTaGCAGGAGGTCCTGAAAACT +
Preference number: 4 (lower is better)
Translates to: CTCLRFSTALRKSTLAARFTSDF*QEVLKT
Trigger: AGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAA...CCTAGCAGCCAGAGTGCTTTTCCGTAAAGCGGTGGAGAATCTCAAGCATGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AGGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAAAGAAGAGTTCTCTCTaGTGTTTAGAGGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSSENKSLTTHSWLFPSEKKSSL*CLEGGG
Trigger: GCCACCTCCCTCTAAACACCAGAGAGAACTCTTCTT...TTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CAAGATGTCCAGGATGCTAAGCTTGTCCCAACAGCCATAGCCTCGGTCTGCTCAAACCAGGATGCTCTCTaGGATTTAAAACATAAACCG +
Preference number: 4 (lower is better)
Translates to: QDVQDAKLVPTAIASVCSNQDAL*DLKHKP
Trigger: CGGTTTATGTTTTAAATCCCAGAGAGCATCCTGGTT...TGAGCAGACCGAGGCTATGGCTGTTGGGACAAGCTTAGCATCCTGGACATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp AATGAATCCCCCGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAATGTAAGCTGGGCTCTTaGGTCACGTTCCTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: NESPACPGVSAVHANRNKCKLGS*VTFLWL
Trigger: CAACCAAAGGAACGTGACCCAAGAGCCCAGCTTACA...TTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCGGGGGATTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGCTGGGCAAGACAGTTTaGTTTTGGAATGAGAATTCA +
Preference number: 4 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKLGKTV*FWNENS
Trigger: TGAATTCTCATTCCAAAACCAAACTGTCTTGCCCAG...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAAAGACTAGGGGAGACTaGGTGCGCTCAGTGGAAACA +
Preference number: 4 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGKTRGD*VRSVET
Trigger: TGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTT...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTAGAGGAAACAACTGAATaGCTGAAAAATGAATCCCCC +
Preference number: 4 (lower is better)
Translates to: GTGAVSVTWKNERKGWGLEETTE*LKNESP
Trigger: GGGGGATTCATTTTTCAGCCATTCAGTTGTTTCCTC...TAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AATGAATCCCCCGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAAGGAAGCTTTTACCTCTaGGTAACCTTGACGGGAGAG +
Preference number: 4 (lower is better)
Translates to: NESPACPGVSAVHANRNKGSFYL*VTLTGE
Trigger: CTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCC...TTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCGGGGGATTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCAGTGCCAAACACACCTaGCCCCACTCCCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVSAKHT*PHSQEA
Trigger: AGCTTCCTGGGAGTGGGGCCAGGTGTGTTTGGCACT...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGAGAAATCTTTGAGCTTAGGGTaGGTGAGGGAAAGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: LTTHSWLFPSEVNIAGEKSLSLG*VRERSF
Trigger: GAACGACCTTTCCCTCACCCACCCTAAGCTCAAAGA...TTTCTCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AGAGGGAATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCATCCTTTTTCACCCTGTaGACAAGGAAGCTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: RGNSALFLYLGRNPPPEASFFTL*TRKLSY
Trigger: GTAGCTCAGCTTCCTTGTCCACAGGGTGAAAAAGGA...TGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAATTCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TGCACATGCTTGAGATTCTCCACCGCTTTACGGAAAAGCACTCTGGCTGCTAGGTGCCTCTTCCCGTACTaGAAATATTTCATGAGCCAT +
Preference number: 4 (lower is better)
Translates to: CTCLRFSTALRKSTLAARCLFPY*KYFMSH
Trigger: ATGGCTCATGAAATATTTCCAGTACGGGAAGAGGCA...CCTAGCAGCCAGAGTGCTTTTCCGTAAAGCGGTGGAGAATCTCAAGCATGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGGCGAGCTCTAAGGACTGACAGTTCAGTTTCTGTCTCTATCGAGGGTTTTGGGTGCCTCTTCCCGTACTaGAAATATTTCATGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GRALRTDSSVSVSIEGFGCLFPY*KYFMSH
Trigger: ATGGCTCATGAAATATTTCCAGTACGGGAAGAGGCA...CCCAAAACCCTCGATAGAGACAGAAACTGAACTGTCAGTCCTTAGAGCTCGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTGGTTATATCTATGCTaGAAAACTGTGGGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFWLYLC*KTVGVL
Trigger: AAGGACACCCACAGTTTTCCAGCATAGATATAACCA...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp AGAGGGAATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCAGCAGGGAGTTTATTCTaGTCAGCCAACAGCTGCATA +
Preference number: 4 (lower is better)
Translates to: RGNSALFLYLGRNPPPEAAGSLF*SANSCI
Trigger: TATGCAGCTGTTGGCTGACCAGAATAAACTCCCTGC...TGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAATTCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTGCATTCGGCTCTTCTTaGTCCACAGACCCCATGATG +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPAFGSS*STDPMM
Trigger: CATCATGGGGTCTGTGGACCAAGAAGAGCCGAATGC...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414705.5
CDS-3UTR TCA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCCTGCTGGTTGGTGGGTaGGTAGTGGATCACAGGCGA +
Preference number: 4 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSLLVGG*VVDHRR
Trigger: TCGCCTGTGATCCACTACTCACCCACCAACCAGCAG...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp AACTCCTTGCCTTCAAAAGGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAAGGCTTCTTTTACGTCTaGTTTCTGGCAGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: NSLPSKGTGAVSVTWKNEGFFYV*FLAGGP
Trigger: AGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCC...TTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACCTTTTGAAGGCAAGGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp AATGAATCCCCCGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAAGGTCAAATTAACCAGTaGAGCTGGGAAGCACATCCT +
Preference number: 4 (lower is better)
Translates to: NESPACPGVSAVHANRNKGQINQ*SWEAHP
Trigger: AGGATGTGCTTCCCAGCTTCACTGGTTAATTTGACC...TTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCGGGGGATTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp AATGAATCCCCCGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAAACAGGTGTGCGGATATaGTTGTTCCGATATTCAGGG +
Preference number: 4 (lower is better)
Translates to: NESPACPGVSAVHANRNKTGVRI*LFRYSG
Trigger: CCCTGAATATCGGAACAAGCATATCCGCACACCTGT...TTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCGGGGGATTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGAGAAATCACGTTCCTTTGGTTaGTCTGAGAACTCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: LTTHSWLFPSEVNIAGEKSRSFG*SENSLP
Trigger: AGGCAAGGAGTTCTCAGAGCAACCAAAGGAACGTGA...TTTCTCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGAAACAAACACATCTaGCAAGAACTTCAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRRNKHI*QELQGF
Trigger: AAACCCTTGAAGTTCTTGGCAGATGTGTTTGTTTCT...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGCAGGTTGCATACAAGTaGACAGGCCCGAATCTGAGC +
Preference number: 4 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLQVAYK*TGPNLS
Trigger: GCTCAGATTCGGGCCTGTGCACTTGTATGCAACCTG...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp AGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTAATCACAGTTGCTATGCAATTGGCTaGTTTGGTTCCACGAAACGT +
Preference number: 4 (lower is better)
Translates to: SCICDLEKRTQGLGFNHSCYAIG*FGSTKR
Trigger: ACGTTTCGTGGAACCAAAGCAGCCAATTGCATAGCA...ACTGTGATTAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp GGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTTGGTGGAAAATACTTGCTATaGAATTGGCTGCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GFGFLQPVSWALGSRSFGGKYLL*NWLLWF
Trigger: GAACCAAAGCAGCCAATTGCATAGCAAGTATTTTCC...ACCAAAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp TACTTTCTCATTCTCTTAGAGGATCTTATTGCCTCTTCCCGTACTGGAAATATTACGAATGCCTCCGCTTaGCACCAGGCGATGAGGAGC +
Preference number: 4 (lower is better)
Translates to: YFLILLEDLIASSRTGNITNASA*HQAMRS
Trigger: GCTCCTCATCGCCTGGTGCCAAGCGGAGGCATTCGT...AATATTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAGAGAATGAGAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TACTTTCTCATTCTCTTAGAGGATCTTATTGCCTCTTCCCGTACTGGAAATATTCACAAGGCGAGTCCGTaGCGAGGCTGTTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: YFLILLEDLIASSRTGNIHKASP*RGCSGH
Trigger: ATGCCCTGAACAGCCTCGCCACGGACTCGCCTTGTG...AATATTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAGAGAATGAGAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp ACAATACAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTCTGGGATGCTGCAGATaGGAATGGCAGGCACCAGCG +
Preference number: 4 (lower is better)
Translates to: TIQEDLQTLEIYYIQQHGLGCCR*EWQAPA
Trigger: CGCTGGTGCCTGCCATTCCCATCTGCAGCATCCCAG...ACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTAAGAGCCTGACTGACTaGACAGCGGCCACTCAAGTG +
Preference number: 4 (lower is better)
Translates to: QEDLQTLEIYYIQQHGRPKSLTD*TAATQV
Trigger: CACTTGAGTGGCCGCTGTCCAGTCAGTCAGGCTCTT...AGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGAGATGTCTGCCACTGGACTCTaGGATGTGAACTCGGAAAAC +
Preference number: 4 (lower is better)
Translates to: EQEKGDSFFHKAIPSPEMSATGL*DVNSEN
Trigger: GTTTTCCGAGTTCACATCCCAGAGTCCAGTGGCAGA...CATCTCAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTAGACGATTCTGCCACTaGACTCTGGGATGTGAACTC +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPRRFCH*TLGCEL
Trigger: GAGTTCACATCCCAGAGTCCAGTGGCAGAATCGTCT...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp GTGCGGATAGGTCTTCAGGGGCAGAAGGGATCTTTAAATAGGTTCAGGTCAAATAAAAGCATGTTGGGCTaGCTCTTGTCCTTATCCACC +
Preference number: 4 (lower is better)
Translates to: VRIGLQGQKGSLNRFRSNKSMLG*LLSLST
Trigger: GGTGGATAAGGACAAGAGCCAGCCCAACATGCTTTT...ATTTGACCTGAACCTATTTAAAGATCCCTTCTGCCCCTGAAGACCTATCCGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTCAACAAAAAGCATGTTaGGCTGGCTCTTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFQQKAC*AGSCPY
Trigger: ATAAGGACAAGAGCCAGCCCAACATGCTTTTTGTTG...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTTTACGTCTGATTTCTaGCAGGAGGTCCTGAAAACT +
Preference number: 4 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFFTSDF*QEVLKT
Trigger: AGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAA...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CCA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGGTGTGGACTCCGGGCTaGGAGATGAACATGAAAGGA +
Preference number: 4 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLVWTPG*EMNMKG
Trigger: TCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACAC...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp CTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGAGAAAAAGAAGAGTTCTCTCTaGTGTTTAGAGGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LTTHSWLFPSEVNIAGEKKKSSL*CLEGGG
Trigger: GCCACCTCCCTCTAAACACCAGAGAGAACTCTTCTT...TTTCTCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGTGTAGAATGTGCTTTTaGTCAGCAGGTGCTTACTAT +
Preference number: 4 (lower is better)
Translates to: FYLWVTLTGEPGLTKPTVCRMCF*SAGAYY
Trigger: ATAGTAAGCACCTGCTGACCAAAAGCACATTCTACA...CACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCACTCTATCGAGGGTTTTaGGTTTCTTCAGCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: RLSWGICSTCKQKQTHLPLYRGF*VSSACK
Trigger: CTTACAGGCTGAAGAAACCCAAAACCCTCGATAGAG...TGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCTGTTTACAGGTGATCTTGTCTaGGCAAGACAGTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: ALFLYLGRNPPPEALGLFTGDLV*ARQFGF
Trigger: AAAACCAAACTGTCTTGCCCAGACAAGATCACCTGT...AAACAGCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGACCTCCAGAAGCACTTaGGCTGTTTTACTTAACAAA +
Preference number: 4 (lower is better)
Translates to: FYLWVTLTGEPGLTKPTVTSRST*AVLLNK
Trigger: TTTGTTAAGTAAAACAGCCCAAGTGCTTCTGGAGGT...CACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTGAGCATTTTGCCTTCTATCTGGAGTGCCAAACACACCTGGCCCCACTCCCAGGGGTCAACCTCTTACTaGCATTCTGTTTATTTAAAA +
Preference number: 4 (lower is better)
Translates to: LSILPSIWSAKHTWPHSQGSTSY*HSVYLK
Trigger: TTTTAAATAAACAGAATGCCAGTAAGAGGTTGACCC...CTGGGAGTGGGGCCAGGTGTGTTTGGCACTCCAGATAGAAGGCAAAATGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AATGAATCCCCCGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAATCCTTTTTCACCCTGTaGACAAGGAAGCTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: NESPACPGVSAVHANRNKSFFTL*TRKLSY
Trigger: GTAGCTCAGCTTCCTTGTCCACAGGGTGAAAAAGGA...TTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCGGGGGATTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCTGTTTATGAGCCATCCTTCTTaGCAAAATTTCCTCCTAGCA +
Preference number: 4 (lower is better)
Translates to: ALFLYLGRNPPPEALGLFMSHPS*QNFLLA
Trigger: TGCTAGGAGGAAATTTTGCCAAGAAGGATGGCTCAT...AAACAGCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGACTGTGGGTGTCCTTTaGATAAAGCATACAGGAGTT +
Preference number: 4 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKTVGVL*IKHTGV
Trigger: AACTCCTGTATGCTTTATCCAAAGGACACCCACAGT...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp CATATTTACATTAACTTAGATGTAGCAGTGCAAACCTTCACTCAACTGAGATCCGCCTCTGCCCAAGACTaGCTCACTGAGGCGTCTTGG +
Preference number: 4 (lower is better)
Translates to: HIYINLDVAVQTFTQLRSASAQD*LTEASW
Trigger: CCAAGACGCCTCAGTGAGCCAGTCTTGGGCAGAGGC...GGATCTCAGTTGAGTGAAGGTTTGCACTGCTACATCTAAGTTAATGTAAATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGACTTGGCGCGTGTTTaGAAAGGGGGATCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGDLARV*KGGSVC
Trigger: ACAAACAGATCCCCCTTTCCAAACACGCGCCAAGTC...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTTATTGGCGAGGTTCTTaGTCCACAGACCCCATGATG +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPYWRGS*STDPMM
Trigger: CATCATGGGGTCTGTGGACCAAGAACCTCGCCAATA...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609507.1
3UTR CAA 72 bp TGTGTGTGTATTACACACACACACGCGTACAGGAGGTaGAGCTACCAGGAGGCCGTTTTTGCTAACATAGTT +
Preference number: 4 (lower is better)
Translates to: CVCITHTHAYRR*SYQEAVFANIV
Trigger: AACTATGTTAGCAAAAACGGCCTCCTGGTAGCTCAACCTCCTGTACGCGTGTGTGTGTGTAATACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATAGTCCCAATGAAGATCTaGAGTCCCAGAGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: VRTNHSPHTLGFSPVKSIVPMKI*SPRGLF
Trigger: AAACAAGCCTCTGGGACTTCAGATCTTCATTGGGAC...TATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp AACTCCTTGCCTTCAAAAGGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAAAATTCTCGCAGTACATaGTGTGCTGGAACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: NSLPSKGTGAVSVTWKNENSRST*CAGTPG
Trigger: ACCAGGAGTTCCAGCACATCATGTACTGCGAGAATT...TTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACCTTTTGAAGGCAAGGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GTGCGGATAGGTCTTCAGGGGCAGAAGGGATCTTTAAATAGGTTCAGGTCAAATTTCCTTTGGTTGCTCTaGGAACTCCTTGCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: VRIGLQGQKGSLNRFRSNFLWLL*ELLAFK
Trigger: TTTGAAGGCAAGGAGTTCTCAGAGCAACCAAAGGAA...ATTTGACCTGAACCTATTTAAAGATCCCTTCTGCCCCTGAAGACCTATCCGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp AGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTAATCACAGTAAACAACTGAATGGCTaGAAAATGAATCCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: SCICDLEKRTQGLGFNHSKQLNG*KMNPPL
Trigger: AAGCGGGGGATTCATTTTTCAGCCATTCAGTTGTTT...ACTGTGATTAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp ATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCACTGGAAATATTTCATaGGCCATCCTTCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: IQPFSSILVETHLQKHLGTGNIS*AILLGK
Trigger: TTTGCCAAGAAGGATGGCTCATGAAATATTTCCAGT...GCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTACAGGTGTGCGGATATaGTTGTTCCGATATTCAGGG +
Preference number: 4 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGITGVRI*LFRYSG
Trigger: CCCTGAATATCGGAACAAGCATATCCGCACACCTGT...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp AACTCCTTGCCTTCAAAAGGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAAACAGGTGTGCGGATATaGTTGTTCCGATATTCAGGG +
Preference number: 4 (lower is better)
Translates to: NSLPSKGTGAVSVTWKNETGVRI*LFRYSG
Trigger: CCCTGAATATCGGAACAAGCATATCCGCACACCTGT...TTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACCTTTTGAAGGCAAGGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTACAGGTGTGCGGATATaGTTGTTCCGATATTCAGGG +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPTGVRI*LFRYSG
Trigger: CCCTGAATATCGGAACAAGCATATCCGCACACCTGT...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR GCA 90 bp AGAGGGAATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCATCACTTTTACAGGTGTaGGGATATGCTTGTTCCGAT +
Preference number: 4 (lower is better)
Translates to: RGNSALFLYLGRNPPPEASLLQV*GYACSD
Trigger: ATCGGAACAAGCATATCCGCACACCTGTAAAAGTGA...TGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAATTCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAATACAGAAGGTGTCTTaGTATAATGGCTTCTTTTAC +
Preference number: 4 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRIQKVS*YNGFFY
Trigger: GTAAAAGAAGCCATTATAGCAAGACACCTTCTGTAT...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR GCA 90 bp CAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTCAGGTTGCATACAAGTaGACAGGCCCGAATCTGAGC +
Preference number: 4 (lower is better)
Translates to: QEDLQTLEIYYIQQHGRPQVAYK*TGPNLS
Trigger: GCTCAGATTCGGGCCTGTGCACTTGTATGCAACCTG...AGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp AATGAATCCCCCGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACGAATTCCATTACAATaGAGGCAGGGTTTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: NESPACPGVSAVHANRNKRIPLQ*RQGFGV
Trigger: GACACCAAAACCCTGCCTGCATTGTAATGGAATTCG...TTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCGGGGGATTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp AGTTTCTGTCTCTATCGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTACCAACTTCCAATCTaGCTAAATGTGACAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SFCLYRGFWVSSACKLGSYQLPI*LNVTAS
Trigger: AGAGGCTGTCACATTTAGGCAGATTGGAAGTTGGTA...AGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCGATAGAGACAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp TTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGGGAAACAACATCATTTaGATCCATTCCATTCAAAGC +
Preference number: 4 (lower is better)
Translates to: FYLWVTLTGEPGLTKPTVGNNII*IHSIQS
Trigger: GCTTTGAATGGAATGGATGCAAATGATGTTGTTTCC...CACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp GGGCGAGCTCTAAGGACTGACAGTTCAGTTTCTGTCTCTATCGAGGGTTTTGGGGGAAACAACATCATTTaGATCCATTCCATTCAAAGC +
Preference number: 4 (lower is better)
Translates to: GRALRTDSSVSVSIEGFGGNNII*IHSIQS
Trigger: GCTTTGAATGGAATGGATGCAAATGATGTTGTTTCC...CCCAAAACCCTCGATAGAGACAGAAACTGAACTGTCAGTCCTTAGAGCTCGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCGCGGAACCAGCAGGATaGATTCTGGAGCCGAGTTTC +
Preference number: 4 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSAEPAG*ILEPSF
Trigger: GAAACTCGGCTCCAGAATCCATCCTGCTGGTTCCGC...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACAGTAGAGTACGGCCGCTaGGTTCTGTTGCTGGTAGCG +
Preference number: 4 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTVEYGR*VLLLVA
Trigger: CGCTACCAGCAACAGAACCCAGCGGCCGTACTCTAC...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp ATTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTTTACAAAGCCCACAGTaGGCACTGAGTGGCCATGAC +
Preference number: 4 (lower is better)
Translates to: ILEQEKGDSFFHKAIPSPLQSPQ*ALSGHD
Trigger: GTCATGGCCACTCAGTGCCCACTGTGGGCTTTGTAA...AGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp AGTTTCTGTCTCTATCGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTACTGTGGGTGTCCTTTaGATAAAGCATACAGGAGTT +
Preference number: 4 (lower is better)
Translates to: SFCLYRGFWVSSACKLGSTVGVL*IKHTGV
Trigger: AACTCCTGTATGCTTTATCCAAAGGACACCCACAGT...AGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCGATAGAGACAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp AGGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGAGAGACCTGTTTGTTaGAGAATTGGTTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: RSSENKSLTTHSWLFPSEERPVC*RIGFLS
Trigger: GGAGAGAAAACCAATTCTCCAACAAACAGGTCTCTC...TTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGCCAGCACCACCATGTTaGAGAGACCTGTTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLPAPPC*RDLFVG
Trigger: TCCAACAAACAGGTCTCTCCAACATGGTGGTGCTGG...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp CAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGCATTCGGCTCTTCTTaGTCCACAGACCCCATGATG +
Preference number: 4 (lower is better)
Translates to: QEDLQTLEIYYIQQHGRPAFGSS*STDPMM
Trigger: CATCATGGGGTCTGTGGACCAAGAAGAGCCGAATGC...AGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609943.5
CDS-3UTR TCA 90 bp GTGCGGATAGGTCTTCAGGGGCAGAAGGGATCTTTAAATAGGTTCAGGTCAAATGTGACTAACAGGCTCTaGGTGGGGGTTTTATTATAT +
Preference number: 4 (lower is better)
Translates to: VRIGLQGQKGSLNRFRSNVTNRL*VGVLLY
Trigger: ATATAATAAAACCCCCACTCAGAGCCTGTTAGTCAC...ATTTGACCTGAACCTATTTAAAGATCCCTTCTGCCCCTGAAGACCTATCCGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp AATGAATCCCCCGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACTGTAGTCCAGAGTaGGAATTAGAACATACCAAC +
Preference number: 4 (lower is better)
Translates to: NESPACPGVSAVHANRNKHCSPE*ELEHTN
Trigger: GTTGGTATGTTCTAATTCTCACTCTGGACTACAGTG...TTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCGGGGGATTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTGGCACTCACAAAAGCTaGGGGAAATGGATGTTTATG +
Preference number: 4 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPGTHKS*GKWMFM
Trigger: CATAAACATCCATTTCCCTCAGCTTTTGTGAGTGCC...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000371564.8
CDS-3UTR TCA 90 bp AGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTAATCACAGTATTCCATTCAAAGCTTaGACTCAGCAGGGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: SCICDLEKRTQGLGFNHSIPFKA*TQQGVY
Trigger: ATAAACTCCCTGCTGAGTTCAAGCTTTGAATGGAAT...ACTGTGATTAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp TGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAAGAAGTCTCATGTAGAATGTaGTTTTGGTCAGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: CPGVSAVHANRNKHICQEVSCRM*FWSAGA
Trigger: AGCACCTGCTGACCAAAAGCACATTCTACATGAGAC...TTCTTGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCTGTTTAGAAACAAACACATCTaGCAAGAACTTCAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: ALFLYLGRNPPPEALGLFRNKHI*QELQGF
Trigger: AAACCCTTGAAGTTCTTGGCAGATGTGTTTGTTTCT...AAACAGCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CTGTCTCATGTAGAATGTGCTTTTGGTCAGCAGGTGCTTACTATTTGGACGGAAGAAGCTGAGCTACTTTaGTACAATAGCAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LSHVECAFGQQVLTIWTEEAELL*YNSRKA
Trigger: TGCCTTCCTGCTATTGTAGCAAAGTAGCTCAGCTTC...TTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAGCACATTCTACATGAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CTGTCTCATGTAGAATGTGCTTTTGGTCAGCAGGTGCTTACTATTTGGACGGAACGAATTCCATTACAATaGAGGCAGGGTTTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LSHVECAFGQQVLTIWTERIPLQ*RQGFGV
Trigger: GACACCAAAACCCTGCCTGCATTGTAATGGAATTCG...TTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAGCACATTCTACATGAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp AAAGCATACAGGAGTTATCTACCAGGATTTAGATTTGGTCCCTTCTGTAAATATGGTCACCGAGCACCTTaGCTCCGGGAAACAAGTTCG +
Preference number: 4 (lower is better)
Translates to: KAYRSYLPGFRFGPFCKYGHRAP*LRETSS
Trigger: CGAACTTGTTTCCCGGAGGCAAGGTGCTCGGTGACC...ATATTTACAGAAGGGACCAAATCTAAATCCTGGTAGATAACTCCTGTATGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGATGCAGGAAAATACTTaGTATGCAATTGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKMQENT*YAIGCF
Trigger: AAAGCAGCCAATTGCATAGCAAGTATTTTCCTGCAT...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp CAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTTCTGCCACTGGACTCTaGGATGTGAACTCGGAAAAC +
Preference number: 4 (lower is better)
Translates to: QEDLQTLEIYYIQQHGRPSATGL*DVNSEN
Trigger: GTTTTCCGAGTTCACATCCCAGAGTCCAGTGGCAGA...AGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp ATTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTAGACGATTCTGCCACTaGACTCTGGGATGTGAACTC +
Preference number: 4 (lower is better)
Translates to: ILEQEKGDSFFHKAIPSPRRFCH*TLGCEL
Trigger: GAGTTCACATCCCAGAGTCCAGTGGCAGAATCGTCT...AGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp GAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACCTCCGTCTTGATGGCTaGGACTGGGTGGTAGGTAAA +
Preference number: 4 (lower is better)
Translates to: EIYYIQQHGRPVRVLHIYLRLDG*DWVVGK
Trigger: TTTACCTACCACCCAGTCCCAGCCATCAAGACGGAG...GTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTATACATATTATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTGCAAAGCGCAGCTGCTGGTTaGTGGGTGAGTAGTGGATCA +
Preference number: 4 (lower is better)
Translates to: AIHIIKQQHLCTIQEDLQSAAAG*WVSSGS
Trigger: TGATCCACTACTCACCCACCAACCAGCAGCTGCGCT...TTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGATAATATGTATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACGGTAATACTTCCTTTTaGTCACTGACCGGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: EIYYIQQHGRPVRVLHIYGNTSF*SLTGGP
Trigger: CGGACCCCCGGTCAGTGACCAAAAGGAAGTATTACC...GTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGAAGAAGAGTTCTCTCTaGTGTTTAGAGGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLKKSSL*CLEGGG
Trigger: GCCACCTCCCTCTAAACACCAGAGAGAACTCTTCTT...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp AGGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAAACCAGGATGCTCTCTaGGATTTAAAACATAAACCG +
Preference number: 4 (lower is better)
Translates to: RSSENKSLTTHSWLFPSENQDAL*DLKHKP
Trigger: CGGTTTATGTTTTAAATCCCAGAGAGCATCCTGGTT...TTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCGCTGTATCTGTGACCTaGAAAAACGAACGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVAVSVT*KNERKG
Trigger: GCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGC...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTCTCTATCGAGGGTTTTaGGTTTCTTCAGCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGILYRGF*VSSACK
Trigger: CTTACAGGCTGAAGAAACCCAAAACCCTCGATAGAG...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCACTGGGCAAGACAGTTTaGTTTTGGAATGAGAATTCA +
Preference number: 4 (lower is better)
Translates to: RLSWGICSTCKQKQTHLPLGKTV*FWNENS
Trigger: TGAATTCTCATTCCAAAACCAAACTGTCTTGCCCAG...TGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGAGAAAACAGGTGATCTTGTCTaGGCAAGACAGTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: LTTHSWLFPSEVNIAGEKTGDLV*ARQFGF
Trigger: AAAACCAAACTGTCTTGCCCAGACAAGATCACCTGT...TTTCTCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGATACGGAAAAGCACTCTaGCTGCTAGGAAGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGYGKAL*LLGRKQ
Trigger: TTGCTTTCTTCCTAGCAGCCAGAGTGCTTTTCCGTA...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATACGGAAAAGCACTCTaGCTGCTAGGAAGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: VRTNHSPHTLGFSPVKSIYGKAL*LLGRKQ
Trigger: TTGCTTTCTTCCTAGCAGCCAGAGTGCTTTTCCGTA...TATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTTCTTTGAGCTTAGGGTaGGTGAGGGAAAGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: QEDLQTLEIYYIQQHGRPSLSLG*VRERSF
Trigger: GAACGACCTTTCCCTCACCCACCCTAAGCTCAAAGA...AGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TGCACATGCTTGAGATTCTCCACCGCTTTACGGAAAAGCACTCTGGCTGCTAGGGGGTCAACCTCTTACTaGCATTCTGTTTATTTAAAA +
Preference number: 4 (lower is better)
Translates to: CTCLRFSTALRKSTLAARGSTSY*HSVYLK
Trigger: TTTTAAATAAACAGAATGCCAGTAAGAGGTTGACCC...CCTAGCAGCCAGAGTGCTTTTCCGTAAAGCGGTGGAGAATCTCAAGCATGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AGTTTCTGTCTCTATCGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGTTATATCTATGCTaGAAAACTGTGGGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: SFCLYRGFWVSSACKLGSWLYLC*KTVGVL
Trigger: AAGGACACCCACAGTTTTCCAGCATAGATATAACCA...AGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCGATAGAGACAGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTCTCACTGAGGCGTCTTaGCTACTGGATGTAAACAAA +
Preference number: 4 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGILTEAS*LLDVNK
Trigger: TTTGTTTACATCCAGTAGCCAAGACGCCTCAGTGAG...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR CAA 72 bp TGTAGAATGTGCTTTTGGTCAGCAGGTGCTTACTATTaGGACGGAACACCATTAAGATCAACCAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: CRMCFWSAGAYY*DGTPLRSTRML
Trigger: GAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAGCACATTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CAA 72 bp CGTGCCTCCCAGTTCTTTGAAGGAATCAATTCATCCTaGGTTATATCTATGCTGGAAAACTGTGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: RASQFFEGINSS*VISMLENCGCP
Trigger: AGGACACCCACAGTTTTCCAGCATAGATATAACCAAGGATGAATTGATTCCTTCAAAGAACTGGGAGGCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp TACTTTCTCATTCTCTTAGAGGATCTTATTGCCTCTTCCCGTACTGGAAATATTCCTAGCCAGGTCGAGTaGGAACAAATCACTCACCAC +
Preference number: 4 (lower is better)
Translates to: YFLILLEDLIASSRTGNIPSQVE*EQITHH
Trigger: GTGGTGAGTGATTTGTTCTCACTCGACCTGGCTAGG...AATATTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAGAGAATGAGAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCTCTGGTGGTGCCTGGTaGGAAATTCTCGCAGTACAT +
Preference number: 4 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSSGGAW*EILAVH
Trigger: ATGTACTGCGAGAATTTCGCACCAGGCACCACCAGA...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCGCTCTGAGAACTCCTTaGCTTCAAAAGGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVALRTP*LQKVQE
Trigger: CTCCTGTACCTTTTGAAGGCAAGGAGTTCTCAGAGC...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CATATTTACATTAACTTAGATGTAGCAGTGCAAACCTTCACTCAACTGAGATCCAGCTCCAGGGCTAGGTaGCCTGGTCAGCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: HIYINLDVAVQTFTQLRSSSRAR*PGQPFK
Trigger: TTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCT...GGATCTCAGTTGAGTGAAGGTTTGCACTGCTACATCTAAGTTAATGTAAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp AGTTTCTGTCTCTATCGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTACTTCTTTTCTTGGTTaGTTTAGCCCTTCTGCTATT +
Preference number: 4 (lower is better)
Translates to: SFCLYRGFWVSSACKLGSTSFLG*FSPSAI
Trigger: AATAGCAGAAGGGCTAAAGCAACCAAGAAAAGAAGT...AGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCGATAGAGACAGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GCTATACATATTATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTGCAATATCGACCGACAGGTTaGATACAAGTGCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: AIHIIKQQHLCTIQEDLQYRPTG*IQVHRP
Trigger: GGGCCTGTGCACTTGTATGCAACCTGTCGGTCGATA...TTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGATAATATGTATAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp CTGTCTCATGTAGAATGTGCTTTTGGTCAGCAGGTGCTTACTATTTGGACGGAACCTTGGTTATATCTATaGTGGAAAACTGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LSHVECAFGQQVLTIWTEPWLYL*WKTVGV
Trigger: GACACCCACAGTTTTCCAGCATAGATATAACCAAGG...TTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAGCACATTCTACATGAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACAGCTGGCGACCTTATGTaGATTCGGCTCTTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTAGDLM*IRLFLV
Trigger: GACCAAGAAGAGCCGAATGCACATAAGGTCGCCAGC...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609943.5
CDS-3UTR CCA 90 bp GAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACTCCCCGCACAGTCGATaGTTGCCCTCATGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: EIYYIQQHGRPVRVLHIYSPHSR*LPSCCF
Trigger: AAAACAACATGAGGGCAACCATCGACTGTGCGGGGA...GTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCCTTGTCTTTCAACCATaGGCAGCTCGTGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSLVFQP*AAREQI
Trigger: GATCTGCTCACGAGCTGCCCATGGTTGAAAGACAAG...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TACTTTCTCATTCTCTTAGAGGATCTTATTGCCTCTTCCCGTACTGGAAATATTCTCCGTCTTGATGGCTaGGACTGGGTGGTAGGTAAA +
Preference number: 4 (lower is better)
Translates to: YFLILLEDLIASSRTGNILRLDG*DWVVGK
Trigger: TTTACCTACCACCCAGTCCCAGCCATCAAGACGGAG...AATATTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAGAGAATGAGAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGAGAAACTGGGCAAGACAGTTTaGTTTTGGAATGAGAATTCA +
Preference number: 4 (lower is better)
Translates to: LTTHSWLFPSEVNIAGEKLGKTV*FWNENS
Trigger: TGAATTCTCATTCCAAAACCAAACTGTCTTGCCCAG...TTTCTCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTATACATATTATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTGCAAAAGACTAGGGGAGACTaGGTGCGCTCAGTGGAAACA +
Preference number: 4 (lower is better)
Translates to: AIHIIKQQHLCTIQEDLQKTRGD*VRSVET
Trigger: TGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTT...TTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGATAATATGTATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGAGGAAACAACTGAATaGCTGAAAAATGAATCCCCC +
Preference number: 4 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGEETTE*LKNESP
Trigger: GGGGGATTCATTTTTCAGCCATTCAGTTGTTTCCTC...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp ACAATACAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTTTACAAAGCCCACAGTaGGCACTGAGTGGCCATGAC +
Preference number: 4 (lower is better)
Translates to: TIQEDLQTLEIYYIQQHGLQSPQ*ALSGHD
Trigger: GTCATGGCCACTCAGTGCCCACTGTGGGCTTTGTAA...ACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATAATGAGCCATCCTTCTTaGCAAAATTTCCTCCTAGCA +
Preference number: 4 (lower is better)
Translates to: VRTNHSPHTLGFSPVKSIMSHPS*QNFLLA
Trigger: TGCTAGGAGGAAATTTTGCCAAGAAGGATGGCTCAT...TATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCCCAGCACCACCATGTTaGAGAGACCTGTTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSPAPPC*RDLFVG
Trigger: TCCAACAAACAGGTCTCTCCAACATGGTGGTGCTGG...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGTTAAATGCACATGCTTaGGATTCTCCACCGCTTTAC +
Preference number: 4 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLLNAHA*DSPPLY
Trigger: GTAAAGCGGTGGAGAATCTCAAGCATGTGCATTTAA...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACAGCACAGGCCCGAATCTaGGCATTTTGCCTTCTATCT +
Preference number: 4 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTAQARI*AFCLLS
Trigger: AGATAGAAGGCAAAATGCTCAGATTCGGGCCTGTGC...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp ACAATACAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTGCACAGGCCCGAATCTaGGCATTTTGCCTTCTATCT +
Preference number: 4 (lower is better)
Translates to: TIQEDLQTLEIYYIQQHGAQARI*AFCLLS
Trigger: AGATAGAAGGCAAAATGCTCAGATTCGGGCCTGTGC...ACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp ATTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTTTGGCTTTTCCCCAGTaGAGTCAATATTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ILEQEKGDSFFHKAIPSPLAFPQ*SQYCWR
Trigger: TCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAA...AGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp GTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATAACTGGAAATATTTCATaGGCCATCCTTCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: VRTNHSPHTLGFSPVKSITGNIS*AILLGK
Trigger: TTTGCCAAGAAGGATGGCTCATGAAATATTTCCAGT...TATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGGTGACTAACAGGCTCTaGGTGGGGGTTTTATTATAT +
Preference number: 4 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLVTNRL*VGVLLY
Trigger: ATATAATAAAACCCCCACTCAGAGCCTGTTAGTCAC...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp GAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACGTGAGTGAGGTTCTTTaGCAAGATGTCCAGGATGCT +
Preference number: 4 (lower is better)
Translates to: EIYYIQQHGRPVRVLHIYVSEVL*QDVQDA
Trigger: AGCATCCTGGACATCTTGTCAAAGAACCTCACTCAC...GTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp GAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACCCAGGACTTTGGTGTTaGCCACTATCTTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: EIYYIQQHGRPVRVLHIYPGLWC*PLSSHS
Trigger: GCTATGAGAAGATAGTGGGCAACACCAAAGTCCTGG...GTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGTCACTTTTACAGGTGTaGGGATATGCTTGTTCCGAT +
Preference number: 4 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLSLLQV*GYACSD
Trigger: ATCGGAACAAGCATATCCGCACACCTGTAAAAGTGA...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp TACTTTCTCATTCTCTTAGAGGATCTTATTGCCTCTTCCCGTACTGGAAATATTTCGCAGTACATGATGTaGTGGAACTCCTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: YFLILLEDLIASSRTGNISQYMM*WNSWWL
Trigger: AAGCCACCAGGAGTTCCAGCACATCATGTACTGCGA...AATATTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAGAGAATGAGAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp AGAGGGAATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCAATACAGAAGGTGTCTTaGTATAATGGCTTCTTTTAC +
Preference number: 4 (lower is better)
Translates to: RGNSALFLYLGRNPPPEAIQKVS*YNGFFY
Trigger: GTAAAAGAAGCCATTATAGCAAGACACCTTCTGTAT...TGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAATTCCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp AAAGCATACAGGAGTTATCTACCAGGATTTAGATTTGGTCCCTTCTGTAAATATTATCGACCGACAGGTTaGATACAAGTGCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: KAYRSYLPGFRFGPFCKYYRPTG*IQVHRP
Trigger: GGGCCTGTGCACTTGTATGCAACCTGTCGGTCGATA...ATATTTACAGAAGGGACCAAATCTAAATCCTGGTAGATAACTCCTGTATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp CAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTATCTCCAGGACTTTaGTGTTGCCCACTATCTTCT +
Preference number: 4 (lower is better)
Translates to: QEDLQTLEIYYIQQHGRPVSPGL*CCPLSS
Trigger: AGAAGATAGTGGGCAACACCAAAGTCCTGGAGATAC...AGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACACTTGTCTTTCAACCATaGGCAGCTCGTGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTLVFQP*AAREQI
Trigger: GATCTGCTCACGAGCTGCCCATGGTTGAAAGACAAG...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CTGTCTCATGTAGAATGTGCTTTTGGTCAGCAGGTGCTTACTATTTGGACGGAATGTAGAATGTGCTTTTaGTCAGCAGGTGCTTACTAT +
Preference number: 4 (lower is better)
Translates to: LSHVECAFGQQVLTIWTECRMCF*SAGAYY
Trigger: ATAGTAAGCACCTGCTGACCAAAAGCACATTCTACA...TTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAGCACATTCTACATGAGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTATACATATTATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTGCAAGCTGTATCTGTGACCTaGAAAAACGAACGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: AIHIIKQQHLCTIQEDLQAVSVT*KNERKG
Trigger: GCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGC...TTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGATAATATGTATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCCTGTACAGACTGGACTaGGAAAACACTCTAAGTACA +
Preference number: 4 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVLYRLD*ENTLST
Trigger: TGTACTTAGAGTGTTTTCTCAGTCCAGTCTGTACAG...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp ATTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTCACTGTAGTCCAGAGTaGGAATTAGAACATACCAAC +
Preference number: 4 (lower is better)
Translates to: ILEQEKGDSFFHKAIPSPHCSPE*ELEHTN
Trigger: GTTGGTATGTTCTAATTCTCACTCTGGACTACAGTG...AGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp ACAATACAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTCCAATCAGAATGCTGTaGGCACCTGCTCTAATGGAA +
Preference number: 4 (lower is better)
Translates to: TIQEDLQTLEIYYIQQHGPIRML*APALME
Trigger: TTCCATTAGAGCAGGTGCTCACAGCATTCTGATTGG...ACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGTCAATTAAATGCACATaGTTGAGATTCTCCACCGCT +
Preference number: 4 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLSIKCT*LRFSTA
Trigger: AGCGGTGGAGAATCTCAAGCATGTGCATTTAATTGA...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp CTGTCTCATGTAGAATGTGCTTTTGGTCAGCAGGTGCTTACTATTTGGACGGAAATGCAGGAAAATACTTaGTATGCAATTGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LSHVECAFGQQVLTIWTEMQENT*YAIGCF
Trigger: AAAGCAGCCAATTGCATAGCAAGTATTTTCCTGCAT...TTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAGCACATTCTACATGAGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp GAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACGTATCTCCAGGACTTTaGTGTTGCCCACTATCTTCT +
Preference number: 4 (lower is better)
Translates to: EIYYIQQHGRPVRVLHIYVSPGL*CCPLSS
Trigger: AGAAGATAGTGGGCAACACCAAAGTCCTGGAGATAC...GTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTATACATATTATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTGCAACCCTCATGTTGTTTTTaGGCTCCAAGGGTATCTCCA +
Preference number: 4 (lower is better)
Translates to: AIHIIKQQHLCTIQEDLQPSCCF*APRVSP
Trigger: TGGAGATACCCTTGGAGCCCAAAAACAACATGAGGG...TTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGATAATATGTATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp CAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTTTTACGTCTGATTTCTaGCAGGAGGTCCTGAAAACT +
Preference number: 4 (lower is better)
Translates to: QEDLQTLEIYYIQQHGRPFTSDF*QEVLKT
Trigger: AGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAA...AGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCACTGGAAATATTTCATaGGCCATCCTTCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVTGNIS*AILLGK
Trigger: TTTGCCAAGAAGGATGGCTCATGAAATATTTCCAGT...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACAGGCACTCACAAAAGCTaGGGGAAATGGATGTTTATG +
Preference number: 4 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTGTHKS*GKWMFM
Trigger: CATAAACATCCATTTCCCTCAGCTTTTGTGAGTGCC...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp AAAGCATACAGGAGTTATCTACCAGGATTTAGATTTGGTCCCTTCTGTAAATATCCAATCAGAATGCTGTaGGCACCTGCTCTAATGGAA +
Preference number: 4 (lower is better)
Translates to: KAYRSYLPGFRFGPFCKYPIRML*APALME
Trigger: TTCCATTAGAGCAGGTGCTCACAGCATTCTGATTGG...ATATTTACAGAAGGGACCAAATCTAAATCCTGGTAGATAACTCCTGTATGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp AACTCCTTGCCTTCAAAAGGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAAATACAGAAGGTGTCTTaGTATAATGGCTTCTTTTAC +
Preference number: 4 (lower is better)
Translates to: NSLPSKGTGAVSVTWKNEIQKVS*YNGFFY
Trigger: GTAAAAGAAGCCATTATAGCAAGACACCTTCTGTAT...TTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACCTTTTGAAGGCAAGGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCCTTAGAGGATCTTATTaGCTCTTCCCGTACTGGAAA +
Preference number: 4 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSLRGSY*LFPYWK
Trigger: TTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAG...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp GTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATAGTAGACCTGTCAGAGTaGTACATATTTACATTAACT +
Preference number: 4 (lower is better)
Translates to: VRTNHSPHTLGFSPVKSIVDLSE*YIFTLT
Trigger: AGTTAATGTAAATATGTAGCACTCTGACAGGTCTAC...TATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACACATAGTCGAAGAGGATaGAGAAGTCAAGCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTHSRRG*RSQARL
Trigger: AAGACGAGCTTGACTTCTCCATCCTCTTCGACTATG...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp ACAATACAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTTGTCCTTATCCACCGTaGCTTCCATCTCCCAAATTT +
Preference number: 4 (lower is better)
Translates to: TIQEDLQTLEIYYIQQHGCPYPP*LPSPKF
Trigger: AAATTTGGGAGATGGAAGCCACGGTGGATAAGGACA...ACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCCAACAAAAAGCATGTTaGGCTGGCTCTTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSQQKAC*AGSCPY
Trigger: ATAAGGACAAGAGCCAGCCCAACATGCTTTTTGTTG...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCTTTACGTCTGATTTCTaGCAGGAGGTCCTGAAAACT +
Preference number: 4 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSFTSDF*QEVLKT
Trigger: AGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAA...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACATACGGAAAAGCACTCTaGCTGCTAGGAAGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTYGKAL*LLGRKQ
Trigger: TTGCTTTCTTCCTAGCAGCCAGAGTGCTTTTCCGTA...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp TACTTTCTCATTCTCTTAGAGGATCTTATTGCCTCTTCCCGTACTGGAAATATTATTTTGCCTTCTATCTaGAGTGCCAAACACACCTGG +
Preference number: 4 (lower is better)
Translates to: YFLILLEDLIASSRTGNIILPSI*SAKHTW
Trigger: CCAGGTGTGTTTGGCACTCCAGATAGAAGGCAAAAT...AATATTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAGAGAATGAGAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTATACATATTATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTGCAAATTTTGCCTTCTATCTaGAGTGCCAAACACACCTGG +
Preference number: 4 (lower is better)
Translates to: AIHIIKQQHLCTIQEDLQILPSI*SAKHTW
Trigger: CCAGGTGTGTTTGGCACTCCAGATAGAAGGCAAAAT...TTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGATAATATGTATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp AAAGCATACAGGAGTTATCTACCAGGATTTAGATTTGGTCCCTTCTGTAAATATTTCCTTTGGTTGCTCTaGGAACTCCTTGCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: KAYRSYLPGFRFGPFCKYFLWLL*ELLAFK
Trigger: TTTGAAGGCAAGGAGTTCTCAGAGCAACCAAAGGAA...ATATTTACAGAAGGGACCAAATCTAAATCCTGGTAGATAACTCCTGTATGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp AAAGCATACAGGAGTTATCTACCAGGATTTAGATTTGGTCCCTTCTGTAAATATTTGGCTTTTCCCCAGTaGAGTCAATATTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: KAYRSYLPGFRFGPFCKYLAFPQ*SQYCWR
Trigger: TCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAA...ATATTTACAGAAGGGACCAAATCTAAATCCTGGTAGATAACTCCTGTATGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CCA 90 bp GCTATACATATTATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTGCAAATGAGCCATCCTTCTTaGCAAAATTTCCTCCTAGCA +
Preference number: 4 (lower is better)
Translates to: AIHIIKQQHLCTIQEDLQMSHPS*QNFLLA
Trigger: TGCTAGGAGGAAATTTTGCCAAGAAGGATGGCTCAT...TTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGATAATATGTATAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTATACATATTATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTGCAATGCCTCTTCCCGTACTaGAAATATTTCATGAGCCAT +
Preference number: 4 (lower is better)
Translates to: AIHIIKQQHLCTIQEDLQCLFPY*KYFMSH
Trigger: ATGGCTCATGAAATATTTCCAGTACGGGAAGAGGCA...TTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGATAATATGTATAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp GCTATACATATTATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTGCAATACTTGCTATGCAATTaGCTGCTTTGGTTCCACGAA +
Preference number: 4 (lower is better)
Translates to: AIHIIKQQHLCTIQEDLQYLLCN*LLWFHE
Trigger: TTCGTGGAACCAAAGCAGCCAATTGCATAGCAAGTA...TTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGATAATATGTATAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
3UTR CAA 72 bp TCTAAGTACAGTCTGAGTGCTAAGAATATTTTCACTTaGCTGCGGATTATTGAGGAAACAACTGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: SKYSLSAKNIFT*LRIIEETTEWL
Trigger: CAGCCATTCAGTTGTTTCCTCAATAATCCGCAGCAAAGTGAAAATATTCTTAGCACTCAGACTGTACTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CAA 72 bp CAGCATCTTTGTACAATACAGGAAGACTTGCAAACTTaGGAAATATACTACATTCAGCAACACGGTAGACCT +
Preference number: 4 (lower is better)
Translates to: QHLCTIQEDLQT*EIYYIQQHGRP
Trigger: AGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGTACAAAGATGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR TCA 90 bp AAAGCATACAGGAGTTATCTACCAGGATTTAGATTTGGTCCCTTCTGTAAATATAAACCTTCACTCAACTaGGATCCTTCTAACACACGT +
Preference number: 4 (lower is better)
Translates to: KAYRSYLPGFRFGPFCKYKPSLN*DPSNTR
Trigger: ACGTGTGTTAGAAGGATCTCAGTTGAGTGAAGGTTT...ATATTTACAGAAGGGACCAAATCTAAATCCTGGTAGATAACTCCTGTATGCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR TCA 90 bp CATATTTACATTAACTTAGATGTAGCAGTGCAAACCTTCACTCAACTGAGATCCATTCCATTCAAAGCTTaGACTCAGCAGGGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: HIYINLDVAVQTFTQLRSIPFKA*TQQGVY
Trigger: ATAAACTCCCTGCTGAGTTCAAGCTTTGAATGGAAT...GGATCTCAGTTGAGTGAAGGTTTGCACTGCTACATCTAAGTTAATGTAAATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR GCA 90 bp GAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACAGAAACAAACACATCTaGCAAGAACTTCAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: EIYYIQQHGRPVRVLHIYRNKHI*QELQGF
Trigger: AAACCCTTGAAGTTCTTGGCAGATGTGTTTGTTTCT...GTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
3UTR CAA 72 bp ATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTaGCAAACTTTGGAAATATACTACATTCAGCAACAC +
Preference number: 4 (lower is better)
Translates to: IKQQHLCTIQED*QTLEIYYIQQH
Trigger: GTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACAGGTATCTGCAGTACATaGAAACAGAAACAAACACAT +
Preference number: 4 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTGICST*KQKQTH
Trigger: ATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACC...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CCA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCGGGTCAACCTCTTACTaGCATTCTGTTTATTTAAAA +
Preference number: 4 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSGSTSY*HSVYLK
Trigger: TTTTAAATAAACAGAATGCCAGTAAGAGGTTGACCC...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR GCA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACAATACAGAAGGTGTCTTaGTATAATGGCTTCTTTTAC +
Preference number: 4 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTIQKVS*YNGFFY
Trigger: GTAAAAGAAGCCATTATAGCAAGACACCTTCTGTAT...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS CCA 90 bp CCCTTTCCTCGTAGGGACGCACGCCGGGTCCGGGGACGGCGCGCCTaGCGCAGCGGGTCCTGGACGCGCCCGGGGAAGCTGAGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: PFPRRDARRVRGRRA*RSGSWTRPGKLSGG
Trigger: GCCGCCGCTCAGCTTCCCCGGGCGCGTCCAGGACCCGCTGCGCCAGGCGCGCCGTCCCCGGACCCGGCGTGCGTCCCTACGAGGAAAGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000610033.5
CDS CCA 90 bp CCGAGGGGACGCCGTCTTCTCTACCGCGTGCCCGCGGGGCTGCCCTaGCCGAGGAGCCTCGGAGCGACCCGGGAGCTGCGCGCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: PRGRRLLYRVPAGLP*PRSLGATRELRASR
Trigger: CCGGGAGGCGCGCAGCTCCCGGGTCGCTCCGAGGCTCCTCGGCCAGGGCAGCCCCGCGGGCACGCGGTAGAGAAGACGGCGTCCCCTCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609507.1
ENST00000609943.5
CDS GCA 90 bp AGCAGCCGAGGGGACGCCGTCTTCTCTACCGCGTGCCCGCGGGGCTaGCCTGGCCGAGGAGCCTCGGAGCGACCCGGGAGCTGCGCGCCT +
Preference number: 5 (lower is better)
Translates to: SSRGDAVFSTACPRG*PGRGASERPGSCAP
Trigger: AGGCGCGCAGCTCCCGGGTCGCTCCGAGGCTCCTCGGCCAGGGCAGCCCCGCGGGCACGCGGTAGAGAAGACGGCGTCCCCTCGGCTGCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609507.1
ENST00000609943.5
CDS CCA 90 bp CGGGCGGCAGGGCAACCAAGGCCTCGGCGCACGAATGCCTCCGCTTaGCACCAGGCGATGAGGAGCGGGAGGCCGGACGGGGCACGGGCG +
Preference number: 5 (lower is better)
Translates to: RAAGQPRPRRTNASA*HQAMRSGRPDGARA
Trigger: CGCCCGTGCCCCGTCCGGCCTCCCGCTCCTCATCGCCTGGTGCCAAGCGGAGGCATTCGTGCGCCGAGGCCTTGGTTGCCCTGCCGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS TCA 90 bp GCTGAGCTCTGGCCCTGGGAGCCGGCGTGCACCAGCACAGAGCGGTaGGCGTCCGCAAGGGACAGCGGGGCGGCCATGAGGGCCGGCTGC +
Preference number: 5 (lower is better)
Translates to: AELWPWEPACTSTER*ASARDSGAAMRAGC
Trigger: GCAGCCGGCCCTCATGGCCGCCCCGCTGTCCCTTGCGGACGCTCACCGCTCTGTGCTGGTGCACGCCGGCTCCCAGGGCCAGAGCTCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 90 bp GCACCAGGCGATGAGGAGCGGGAGGCCGGACGGGGCACGGGCGAGTaGCGGCCCAGGCAGCTGTCCTCGGCGAGGCTGGTTCGAGGTGAC +
Preference number: 5 (lower is better)
Translates to: APGDEEREAGRGTGE*RPRQLSSARLVRGD
Trigger: GTCACCTCGAACCAGCCTCGCCGAGGACAGCTGCCTGGGCCGCCACTCGCCCGTGCCCCGTCCGGCCTCCCGCTCCTCATCGCCTGGTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS GCA 90 bp GGTGAGGCTCCGGGCGGCAGGGCAACCAAGGCCTCGGCGCACGAATaGCTCCGCTTGGCACCAGGCGATGAGGAGCGGGAGGCCGGACGG +
Preference number: 5 (lower is better)
Translates to: GEAPGGRATKASAHE*LRLAPGDEEREAGR
Trigger: CCGTCCGGCCTCCCGCTCCTCATCGCCTGGTGCCAAGCGGAGGCATTCGTGCGCCGAGGCCTTGGTTGCCCTGCCGCCCGGAGCCTCACC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS GCA 90 bp TTTGTATCGACCAGCAGCCGAGGGGACGCCGTCTTCTCTACCGCGTaGCCGCGGGGCTGCCCTGGCCGAGGAGCCTCGGAGCGACCCGGG +
Preference number: 5 (lower is better)
Translates to: FVSTSSRGDAVFSTA*PRGCPGRGASERPG
Trigger: CCCGGGTCGCTCCGAGGCTCCTCGGCCAGGGCAGCCCCGCGGGCACGCGGTAGAGAAGACGGCGTCCCCTCGGCTGCTGGTCGATACAAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609507.1
ENST00000609943.5
CDS CCA 90 bp CCAGGAACTCCACGGCCGGGTAGATGTGGCGAGGCAGGCCGGCCTTaGATGGGGCGGCAGACACCGGCGAGGGGTCAGGGCTGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: PGTPRPGRCGEAGRP*MGRQTPARGQGWSS
Trigger: GGAAGACCAGCCCTGACCCCTCGCCGGTGTCTGCCGCCCCATCCAAGGCCGGCCTGCCTCGCCACATCTACCCGGCCGTGGAGTTCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 90 bp GAACTCCACGGCCGGGTAGATGTGGCGAGGCAGGCCGGCCTTGGATaGGGCGGCAGACACCGGCGAGGGGTCAGGGCTGGTCTTCCACAT +
Preference number: 5 (lower is better)
Translates to: ELHGRVDVARQAGLG*GGRHRRGVRAGLPH
Trigger: ATGTGGAAGACCAGCCCTGACCCCTCGCCGGTGTCTGCCGCCCCATCCAAGGCCGGCCTGCCTCGCCACATCTACCCGGCCGTGGAGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS TCA 90 bp GAGTACGGCCGCTGGGTTCTGTTGCTGGTAGCGGGCGTCAGGGGATaGGAGCCCCGTGCGGAACTGCTGGCAGGGAGCCATGGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: EYGRWVLLLVAGVRG*EPRAELLAGSHGGH
Trigger: GTGGCCACCATGGCTCCCTGCCAGCAGTTCCGCACGGGGCTCTCATCCCCTGACGCCCGCTACCAGCAACAGAACCCAGCGGCCGTACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 90 bp GGACGGAGTGATCTCGATCCGAGGGCTCAGGCCCGAGGCCCCTGCTaGCTTGGCCGCGCTCAGAAACTTCTGCGGCCCTACCCTATCCGG +
Preference number: 5 (lower is better)
Translates to: GRSDLDPRAQARGPC*LGRAQKLLRPYPIR
Trigger: CCGGATAGGGTAGGGCCGCAGAAGTTTCTGAGCGCGGCCAAGCCAGCAGGGGCCTCGGGCCTGAGCCCTCGGATCGAGATCACTCCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS GCA 90 bp GTGGGACGGAGTGATCTCGATCCGAGGGCTCAGGCCCGAGGCCCCTaGTGGCTTGGCCGCGCTCAGAAACTTCTGCGGCCCTACCCTATC +
Preference number: 5 (lower is better)
Translates to: VGRSDLDPRAQARGP*WLGRAQKLLRPYPI
Trigger: GATAGGGTAGGGCCGCAGAAGTTTCTGAGCGCGGCCAAGCCAGCAGGGGCCTCGGGCCTGAGCCCTCGGATCGAGATCACTCCGTCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS GCA 90 bp CTGCTCCACCAGGAGGCCCGCGTCTCTCATGCGGAGGGGCCCCACTaGCTGGATCAGTTCGTGGGACGGAGTGATCTCGATCCGAGGGCT +
Preference number: 5 (lower is better)
Translates to: LLHQEARVSHAEGPH*LDQFVGRSDLDPRA
Trigger: AGCCCTCGGATCGAGATCACTCCGTCCCACGAACTGATCCAGGCAGTGGGGCCCCTCCGCATGAGAGACGCGGGCCTCCTGGTGGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS CCA 90 bp TCCACCAGGAGGCCCGCGTCTCTCATGCGGAGGGGCCCCACTGCCTaGATCAGTTCGTGGGACGGAGTGATCTCGATCCGAGGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: STRRPASLMRRGPTA*ISSWDGVISIRGLR
Trigger: CCTGAGCCCTCGGATCGAGATCACTCCGTCCCACGAACTGATCCAGGCAGTGGGGCCCCTCCGCATGAGAGACGCGGGCCTCCTGGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS CCA 90 bp TGGCAGGCACCAGCGGCTTGGGCCAAGTGGGCGGAACCAGCAGGATaGATTCTGGAGCCGAGTTTCTCCTCTCGCCCTGCTCGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: WQAPAAWAKWAEPAG*ILEPSFSSRPARRA
Trigger: GGCCCTGCGAGCAGGGCGAGAGGAGAAACTCGGCTCCAGAATCCATCCTGCTGGTTCCGCCCACTTGGCCCAAGCCGCTGGTGCCTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 90 bp GGGGCACGGGCGAGTGGCGGCCCAGGCAGCTGTCCTCGGCGAGGCTaGTTCGAGGTGACATTATTGGCGAGGTTCTTGGTCCACAGACCC +
Preference number: 5 (lower is better)
Translates to: GARASGGPGSCPRRG*FEVTLLARFLVHRP
Trigger: GGGTCTGTGGACCAAGAACCTCGCCAATAATGTCACCTCGAACCAGCCTCGCCGAGGACAGCTGCCTGGGCCGCCACTCGCCCGTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609507.1
CDS CCA 90 bp CACCAGCGGCTTGGGCCAAGTGGGCGGAACCAGCAGGATGGATTCTaGAGCCGAGTTTCTCCTCTCGCCCTGCTCGCAGGGCCCCAGGAA +
Preference number: 5 (lower is better)
Translates to: HQRLGPSGRNQQDGF*SRVSPLALLAGPQE
Trigger: TTCCTGGGGCCCTGCGAGCAGGGCGAGAGGAGAAACTCGGCTCCAGAATCCATCCTGCTGGTTCCGCCCACTTGGCCCAAGCCGCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS TCA 90 bp CTGGAACTCCTGGTGGCTTCCGCAGCGCAGCTGCTGGTTGGTGGGTaGGTAGTGGATCACAGGCGAGGCCTGCTGGTTGGTCGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: LELLVASAAQLLVGG*VVDHRRGLLVGRRG
Trigger: CCCTCTCCGACCAACCAGCAGGCCTCGCCTGTGATCCACTACTCACCCACCAACCAGCAGCTGCGCTGCGGAAGCCACCAGGAGTTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 90 bp GGGGCACGGGCGAGTGGCGGCCCAGGCAGCTGTCCTCGGCGAGGCTaGTTCGAGGTGACATTATTGGCGAGGTTCTGGGGGAATAATGAG +
Preference number: 5 (lower is better)
Translates to: GARASGGPGSCPRRG*FEVTLLARFWGNNE
Trigger: CTCATTATTCCCCCAGAACCTCGCCAATAATGTCACCTCGAACCAGCCTCGCCGAGGACAGCTGCCTGGGCCGCCACTCGCCCGTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR CAA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGCAGGCACCAGCGGCTaGGGCCAAGTGGGCGGAACC +
Preference number: 5 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWAGTSG*GQVGGT
Trigger: GGTTCCGCCCACTTGGCCCAAGCCGCTGGTGCCTGC...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS GCA 90 bp GGCTCTTCTTGGTCCACAGACCCCATGATGCGGAGGGGATGGCAGTaGCCCAGTCTGAACGCAGCCTCTCTCTGCATCTGGAGGGCACGG +
Preference number: 5 (lower is better)
Translates to: GSSWSTDPMMRRGWQ*PSLNAASLCIWRAR
Trigger: CCGTGCCCTCCAGATGCAGAGAGAGGCTGCGTTCAGACTGGGGCACTGCCATCCCCTCCGCATCATGGGGTCTGTGGACCAAGAAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609943.5
CDS GCA 90 bp CGAGGTTCTTGGTCCACAGACCCCATGATGCGGAGGGGATGGCAGTaGCCCAGTCTGAACGCAGCCTCTCTCTGCATCTGGAGGGCACGG +
Preference number: 5 (lower is better)
Translates to: RGSWSTDPMMRRGWQ*PSLNAASLCIWRAR
Trigger: CCGTGCCCTCCAGATGCAGAGAGAGGCTGCGTTCAGACTGGGGCACTGCCATCCCCTCCGCATCATGGGGTCTGTGGACCAAGAACCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609507.1
CDS CCA 90 bp GGGGCACGGGCGAGTGGCGGCCCAGGCAGCTGTCCTCGGCGAGGCTaGTTCGAGGTGACATTATTGGCGAGGTTCTTCGTTCGGATTCAA +
Preference number: 5 (lower is better)
Translates to: GARASGGPGSCPRRG*FEVTLLARFFVRIQ
Trigger: TTGAATCCGAACGAAGAACCTCGCCAATAATGTCACCTCGAACCAGCCTCGCCGAGGACAGCTGCCTGGGCCGCCACTCGCCCGTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610033.5
CDS-3UTR CAA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGTCCGTGGGCTCCGTCTaGATGGCTGGGACTGGGTGG +
Preference number: 5 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWESVGSV*MAGTGW
Trigger: CCACCCAGTCCCAGCCATCAAGACGGAGCCCACGGA...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAGCTCAGCCTCTGACCTaGACTGACCGGGGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGAQPLT*TDRGRA
Trigger: GGCCCGCCCCCGGTCAGTCAAGGTCAGAGGCTGAGC...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCGCTCAGCCTCTGACCTaGACTGACCGGGGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGAQPLT*TDRGRA
Trigger: GGCCCGCCCCCGGTCAGTCAAGGTCAGAGGCTGAGC...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS TCA 90 bp GCGGGCCAGGTCTGGTGGTGCCTGGTGCGAAATTCTCGCAGTACATaGTGTGCTGGAACTCCTGGTGGCTTCCGCAGCGCAGCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: AGQVWWCLVRNSRST*CAGTPGGFRSAAAG
Trigger: ACCAGCAGCTGCGCTGCGGAAGCCACCAGGAGTTCCAGCACATCATGTACTGCGAGAATTTCGCACCAGGCACCACCAGACCTGGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 90 bp CAGTCACTGGGATGCTGCAGATGGGAATGGCAGGCACCAGCGGCTTaGGCCAAGTGGGCGGAACCAGCAGGATGGATTCTGGAGCCGAGT +
Preference number: 5 (lower is better)
Translates to: QSLGCCRWEWQAPAA*AKWAEPAGWILEPS
Trigger: ACTCGGCTCCAGAATCCATCCTGCTGGTTCCGCCCACTTGGCCCAAGCCGCTGGTGCCTGCCATTCCCATCTGCAGCATCCCAGTGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGGCCCCTGCTGGCTaGGCCGCGCTCAGAAACTTC +
Preference number: 5 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWEAPAG*AALRNF
Trigger: GAAGTTTCTGAGCGCGGCCAAGCCAGCAGGGGCCTC...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS-3UTR CAA 90 bp GGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAAAGCAGGCACCAGCGGCTaGGGCCAAGTGGGCGGAACC +
Preference number: 5 (lower is better)
Translates to: GRLGETGCAQWKQLGGRKAGTSG*GQVGGT
Trigger: GGTTCCGCCCACTTGGCCCAAGCCGCTGGTGCCTGC...TTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGGCAGGCACCAGCGGCTaGGGCCAAGTGGGCGGAACC +
Preference number: 5 (lower is better)
Translates to: VASSLSESPLSAHTLIRVAGTSG*GQVGGT
Trigger: GGTTCCGCCCACTTGGCCCAAGCCGCTGGTGCCTGC...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAGGCCGCTGGGTTCTGTaGCTGGTAGCGGGCGTCAGG +
Preference number: 5 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGGRWVL*LVAGVR
Trigger: CCTGACGCCCGCTACCAGCAACAGAACCCAGCGGCC...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS GCA 90 bp CTGACCTTGACTGACCGGGGGCGGGCCAGGTCTGGTGGTGCCTGGTaGGAAATTCTCGCAGTACATGATGTGCTGGAACTCCTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: LTLTDRGRARSGGAW*EILAVHDVLELLVA
Trigger: AGCCACCAGGAGTTCCAGCACATCATGTACTGCGAGAATTTCGCACCAGGCACCACCAGACCTGGCCCGCCCCCGGTCAGTCAAGGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 90 bp GGATGCTGCAGATGGGAATGGCAGGCACCAGCGGCTTGGGCCAAGTaGGCGGAACCAGCAGGATGGATTCTGGAGCCGAGTTTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: GCCRWEWQAPAAWAK*AEPAGWILEPSFSS
Trigger: AGAGGAGAAACTCGGCTCCAGAATCCATCCTGCTGGTTCCGCCCACTTGGCCCAAGCCGCTGGTGCCTGCCATTCCCATCTGCAGCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 90 bp CCTCTGACCTTGACTGACCGGGGGCGGGCCAGGTCTGGTGGTGCCTaGTGCGAAATTCTCGCAGTACATGATGTGCTGGAACTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: PLTLTDRGRARSGGA*CEILAVHDVLELLV
Trigger: CACCAGGAGTTCCAGCACATCATGTACTGCGAGAATTTCGCACCAGGCACCACCAGACCTGGCCCGCCCCCGGTCAGTCAAGGTCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp CAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAGGCCCCTGCTGGCTaGGCCGCGCTCAGAAACTTC +
Preference number: 5 (lower is better)
Translates to: QRKTRGDWVRSVETVGRKEAPAG*AALRNF
Trigger: GAAGTTTCTGAGCGCGGCCAAGCCAGCAGGGGCCTC...CTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGCCTCCAGTTGGAGCTTaGACAGCCCCTCGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWPPVGA*TAPRLP
Trigger: AGGCAGCCGAGGGGCTGTCAAAGCTCCAACTGGAGG...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGTCCGTGGGCTCCGTCTaGATGGCTGGGACTGGGTGG +
Preference number: 5 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVSVGSV*MAGTGW
Trigger: CCACCCAGTCCCAGCCATCAAGACGGAGCCCACGGA...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGGGCCGCTGGGTTCTGTaGCTGGTAGCGGGCGTCAGG +
Preference number: 5 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMGRWVL*LVAGVR
Trigger: CCTGACGCCCGCTACCAGCAACAGAACCCAGCGGCC...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGCTCAGCCTCTGACCTaGACTGACCGGGGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKAQPLT*TDRGRA
Trigger: GGCCCGCCCCCGGTCAGTCAAGGTCAGAGGCTGAGC...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS TCA 90 bp CGAGTGGCGGCCCAGGCAGCTGTCCTCGGCGAGGCTGGTTCGAGGTaGCATTATTGGCGAGGTTCTGGGGGAATAATGAGCAGGGATGTT +
Preference number: 5 (lower is better)
Translates to: RVAAQAAVLGEAGSR*HYWRGSGGIMSRDV
Trigger: AACATCCCTGCTCATTATTCCCCCAGAACCTCGCCAATAATGTCACCTCGAACCAGCCTCGCCGAGGACAGCTGCCTGGGCCGCCACTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS GCA 90 bp CCAGGTCTGGTGGTGCCTGGTGCGAAATTCTCGCAGTACATGATGTaGTGGAACTCCTGGTGGCTTCCGCAGCGCAGCTGCTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: PGLVVPGAKFSQYMM*WNSWWLPQRSCWLV
Trigger: CACCAACCAGCAGCTGCGCTGCGGAAGCCACCAGGAGTTCCAGCACATCATGTACTGCGAGAATTTCGCACCAGGCACCACCAGACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 90 bp GGATGTTTTGAAACTGCGGACACAGGTCGTCGGGCCCGCCGTTATTaGGCGAGACGCAGGGCGAGGTGTAGGGGGAGAAGGTGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: GCFETADTGRRARRY*ARRRARCRGRRCQK
Trigger: TTTCTGACACCTTCTCCCCCTACACCTCGCCCTGCGTCTCGCCCAATAACGGCGGGCCCGACGACCTGTGTCCGCAGTTTCAAAACATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS CCA 90 bp GGTCTGGTGGTGCCTGGTGCGAAATTCTCGCAGTACATGATGTGCTaGAACTCCTGGTGGCTTCCGCAGCGCAGCTGCTGGTTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: GLVVPGAKFSQYMMC*NSWWLPQRSCWLVG
Trigger: ACCCACCAACCAGCAGCTGCGCTGCGGAAGCCACCAGGAGTTCCAGCACATCATGTACTGCGAGAATTTCGCACCAGGCACCACCAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp ACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGCACCTCCAGTTGGAGCTTaGACAGCCCCTCGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: TARQDSSRARCPGQPFKAPPVGA*TAPRLP
Trigger: AGGCAGCCGAGGGGCTGTCAAAGCTCCAACTGGAGG...TGCTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCCCTCCAGTTGGAGCTTaGACAGCCCCTCGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGPPVGA*TAPRLP
Trigger: AGGCAGCCGAGGGGCTGTCAAAGCTCCAACTGGAGG...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GAACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGCCTCCAGTTGGAGCTTaGACAGCCCCTCGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: EQLAKTAPGLGALVSLLKPPVGA*TAPRLP
Trigger: AGGCAGCCGAGGGGCTGTCAAAGCTCCAACTGGAGG...CTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCGGCCGCTGGGTTCTGTaGCTGGTAGCGGGCGTCAGG +
Preference number: 5 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFGRWVL*LVAGVR
Trigger: CCTGACGCCCGCTACCAGCAACAGAACCCAGCGGCC...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACGGCCGCTGGGTTCTGTaGCTGGTAGCGGGCGTCAGG +
Preference number: 5 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDGRWVL*LVAGVR
Trigger: CCTGACGCCCGCTACCAGCAACAGAACCCAGCGGCC...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GAACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGACCGGGGGTCCGTTTTaGGCGGCTCTTTGGCTCGTG +
Preference number: 5 (lower is better)
Translates to: EQLAKTAPGLGALVSLLKTGGPF*AALWLV
Trigger: CACGAGCCAAAGAGCCGCCAAAAACGGACCCCCGGT...CTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCACCGGGGGTCCGTTTTaGGCGGCTCTTTGGCTCGTG +
Preference number: 5 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGTGGPF*AALWLV
Trigger: CACGAGCCAAAGAGCCGCCAAAAACGGACCCCCGGT...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAACCGGGGGTCCGTTTTaGGCGGCTCTTTGGCTCGTG +
Preference number: 5 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGTGGPF*AALWLV
Trigger: CACGAGCCAAAGAGCCGCCAAAAACGGACCCCCGGT...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 90 bp CAGTCTGAACGCAGCCTCTCTCTGCATCTGGAGGGCACGGGGACTTaGCGCGTGTTTGGAAAGGGGGATCTGTTTGTATCGACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: QSERSLSLHLEGTGT*RVFGKGDLFVSTSS
Trigger: GCTGCTGGTCGATACAAACAGATCCCCCTTTCCAAACACGCGCCAAGTCCCCGTGCCCTCCAGATGCAGAGAGAGGCTGCGTTCAGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609507.1
ENST00000609943.5
CDS-3UTR CAA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTGCAGGCACCAGCGGCTaGGGCCAAGTGGGCGGAACC +
Preference number: 5 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFAGTSG*GQVGGT
Trigger: GGTTCCGCCCACTTGGCCCAAGCCGCTGGTGCCTGC...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CAA 90 bp ACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGCACCCCGTGAGGATCATTaGCTGGCCGCCATAGACCAG +
Preference number: 5 (lower is better)
Translates to: TARQDSSRARCPGQPFKAPREDH*LAAIDQ
Trigger: CTGGTCTATGGCGGCCAGCAAATGATCCTCACGGGG...TGCTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGTCCGTGGGCTCCGTCTaGATGGCTGGGACTGGGTGG +
Preference number: 5 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKSVGSV*MAGTGW
Trigger: CCACCCAGTCCCAGCCATCAAGACGGAGCCCACGGA...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp TGCACATGCTTGAGATTCTCCACCGCTTTACGGAAAAGCACTCTGGCTGCTAGGGGCCGCTGGGTTCTGTaGCTGGTAGCGGGCGTCAGG +
Preference number: 5 (lower is better)
Translates to: CTCLRFSTALRKSTLAARGRWVL*LVAGVR
Trigger: CCTGACGCCCGCTACCAGCAACAGAACCCAGCGGCC...CCTAGCAGCCAGAGTGCTTTTCCGTAAAGCGGTGGAGAATCTCAAGCATGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp CTGAGCATTTTGCCTTCTATCTGGAGTGCCAAACACACCTGGCCCCACTCCCAGACCGGGGGTCCGTTTTaGGCGGCTCTTTGGCTCGTG +
Preference number: 5 (lower is better)
Translates to: LSILPSIWSAKHTWPHSQTGGPF*AALWLV
Trigger: CACGAGCCAAAGAGCCGCCAAAAACGGACCCCCGGT...CTGGGAGTGGGGCCAGGTGTGTTTGGCACTCCAGATAGAAGGCAAAATGCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp TGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGGGCACTGAGTTAGCTGTGGCCCAGTaGTGGCATGGACTGGGCGAG +
Preference number: 5 (lower is better)
Translates to: WVTLTGEPGLTKPTVGTELAVAQ*WHGLGE
Trigger: CTCGCCCAGTCCATGCCACAACTGGGCCACAGCTAA...CTCAGTGCCCACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGCACGCGTACAGGAGGTaGAGCTACCAGGAGGCCGTT +
Preference number: 5 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVHAYRR*SYQEAV
Trigger: AACGGCCTCCTGGTAGCTCAACCTCCTGTACGCGTG...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACCCTCCAGTTGGAGCTTaGACAGCCCCTCGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDPPVGA*TAPRLP
Trigger: AGGCAGCCGAGGGGCTGTCAAAGCTCCAACTGGAGG...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTTGGTTCCGTGGGCTCCGTCTaGATGGCTGGGACTGGGTGG +
Preference number: 5 (lower is better)
Translates to: GFGFLQPVSWALGSRSFGSVGSV*MAGTGW
Trigger: CCACCCAGTCCCAGCCATCAAGACGGAGCCCACGGA...ACCAAAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCACCGGGGGTCCGTTTTaGGCGGCTCTTTGGCTCGTG +
Preference number: 5 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFTGGPF*AALWLV
Trigger: CACGAGCCAAAGAGCCGCCAAAAACGGACCCCCGGT...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGCTTAGTGCCCATACATaGATCCGCGTGTGGACTCCG +
Preference number: 5 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWLSAHT*IRVWTP
Trigger: CGGAGTCCACACGCGGATCAATGTATGGGCACTAAG...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAAATTAGCTGTGGCCCAGTaGTGGCATGGACTGGGCGAG +
Preference number: 5 (lower is better)
Translates to: GRLGETGCAQWKQLGGRKLAVAQ*WHGLGE
Trigger: CTCGCCCAGTCCATGCCACAACTGGGCCACAGCTAA...TTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp AGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAAAGGGGGATCTGTTaGTATCGACCAGCAGCCGAG +
Preference number: 5 (lower is better)
Translates to: SESPLSAHTLIRVWTPGWERGIC*YRPAAE
Trigger: CTCGGCTGCTGGTCGATACAAACAGATCCCCCTTTC...CCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609507.1
ENST00000609943.5
CDS CCA 90 bp GGCGAGGTTCTTCGTTCGGATTCAAATACTCATAGTCGAAGAGGATaGAGAAGTCAAGCTCGTCTTGGGGGCTGCCCCCAGGCTCGTGGC +
Preference number: 5 (lower is better)
Translates to: GEVLRSDSNTHSRRG*RSQARLGGCPQARG
Trigger: GCCACGAGCCTGGGGGCAGCCCCCAAGACGAGCTTGACTTCTCCATCCTCTTCGACTATGAGTATTTGAATCCGAACGAAGAACCTCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000610033.5
CDS-3UTR CAA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGGGTATCTCCAGGACTTaGGTGTTGCCCACTATCTTC +
Preference number: 5 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWEGISRT*VLPTIF
Trigger: GAAGATAGTGGGCAACACCAAAGTCCTGGAGATACC...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGACCCCGTGAGGATCATTaGCTGGCCGCCATAGACCAG +
Preference number: 5 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRPREDH*LAAIDQ
Trigger: CTGGTCTATGGCGGCCAGCAAATGATCCTCACGGGG...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp CGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTCCCCGTGAGGATCATTaGCTGGCCGCCATAGACCAG +
Preference number: 5 (lower is better)
Translates to: RGFWVSSACKLGSWVTFLPREDH*LAAIDQ
Trigger: CTGGTCTATGGCGGCCAGCAAATGATCCTCACGGGG...AAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCCCCCGTGAGGATCATTaGCTGGCCGCCATAGACCAG +
Preference number: 5 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFPREDH*LAAIDQ
Trigger: CTGGTCTATGGCGGCCAGCAAATGATCCTCACGGGG...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp ACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGCAATGTTGGGCTGGCTCTaGTCCTTATCCACCGTGGCT +
Preference number: 5 (lower is better)
Translates to: TARQDSSRARCPGQPFKAMLGWL*SLSTVA
Trigger: AGCCACGGTGGATAAGGACAAGAGCCAGCCCAACAT...TGCTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGATGTTGGGCTGGCTCTaGTCCTTATCCACCGTGGCT +
Preference number: 5 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVMLGWL*SLSTVA
Trigger: AGCCACGGTGGATAAGGACAAGAGCCAGCCCAACAT...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp CAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGTTTTTGGCGGCTCTTaGGCTCGTGGCATTCTGCTG +
Preference number: 5 (lower is better)
Translates to: QRKTRGDWVRSVETVGRKVFGGS*ARGILL
Trigger: CAGCAGAATGCCACGAGCCAAAGAGCCGCCAAAAAC...CTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAGTTTTTGGCGGCTCTTaGGCTCGTGGCATTCTGCTG +
Preference number: 5 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGVFGGS*ARGILL
Trigger: CAGCAGAATGCCACGAGCCAAAGAGCCGCCAAAAAC...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGCTTAGTGCCCATACATaGATCCGCGTGTGGACTCCG +
Preference number: 5 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVLSAHT*IRVWTP
Trigger: CGGAGTCCACACGCGGATCAATGTATGGGCACTAAG...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGAAGCAAGCCGGAACCTaGCAAAGCATCCAGGTTGTA +
Preference number: 5 (lower is better)
Translates to: ESPLSAHTLIRVWTPGWEKQAGT*QSIQVV
Trigger: TACAACCTGGATGCTTTGCAAGGTTCCGGCTTGCTT...CTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAGCGGACTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp CAAGATGTCCAGGATGCTAAGCTTGTCCCAACAGCCATAGCCTCGGTCTGCTCAGGGTCACCGAGCACCTaGCCTCCGGGAAACAAGTTC +
Preference number: 5 (lower is better)
Translates to: QDVQDAKLVPTAIASVCSGSPST*PPGNKF
Trigger: GAACTTGTTTCCCGGAGGCAAGGTGCTCGGTGACCC...TGAGCAGACCGAGGCTATGGCTGTTGGGACAAGCTTAGCATCCTGGACATCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp GCATCCAGGTTGTACAGCTGCAGCAGACAGGTGCTTGCTCTCTGCAGCCTGGGTTGCATTCGGCTCTTCTaGGTCCACAGACCCCATGAT +
Preference number: 5 (lower is better)
Translates to: ASRLYSCSRQVLALCSLGCIRLF*VHRPHD
Trigger: ATCATGGGGTCTGTGGACCAAGAAGAGCCGAATGCA...ACCCAGGCTGCAGAGAGCAAGCACCTGTCTGCTGCAGCTGTACAACCTGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609943.5
CDS-3UTR CAA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAGGACTTGGCGCGTGTTaGGAAAGGGGGATCTGTTTG +
Preference number: 5 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGGLGAC*ERGICL
Trigger: CAAACAGATCCCCCTTTCCAAACACGCGCCAAGTCC...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609507.1
ENST00000609943.5
CDS-3UTR CAA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCGGACTTGGCGCGTGTTaGGAAAGGGGGATCTGTTTG +
Preference number: 5 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGGLGAC*ERGICL
Trigger: CAAACAGATCCCCCTTTCCAAACACGCGCCAAGTCC...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609507.1
ENST00000609943.5
CDS CCA 90 bp TCGGCTCTTCTTCGTTCGGATTCAAATACTCATAGTCGAAGAGGATaGAGAAGTCAAGCTCGTCTTGGGGGCTGCCCCCAGGCTCGTGGC +
Preference number: 5 (lower is better)
Translates to: SALLRSDSNTHSRRG*RSQARLGGCPQARG
Trigger: GCCACGAGCCTGGGGGCAGCCCCCAAGACGAGCTTGACTTCTCCATCCTCTTCGACTATGAGTATTTGAATCCGAACGAAGAAGAGCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTGCAGGCACCAGCGGCTaGGGCCAAGTGGGCGGAACC +
Preference number: 5 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPAGTSG*GQVGGT
Trigger: GGTTCCGCCCACTTGGCCCAAGCCGCTGGTGCCTGC...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CAA 90 bp GTTAAGATGCGCTGGGTCACCGAGCACCTTGCCTCCGGGAAACAAGTTCGGGAAGCCCTCATGTTGTTTTaGGGCTCCAAGGGTATCTCC +
Preference number: 5 (lower is better)
Translates to: VKMRWVTEHLASGKQVREALMLF*GSKGIS
Trigger: GGAGATACCCTTGGAGCCCAAAAACAACATGAGGGC...TTCCCGAACTTGTTTCCCGGAGGCAAGGTGCTCGGTGACCCAGCGCATCTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAGCCCTCATGTTGTTTTaGGGCTCCAAGGGTATCTCC +
Preference number: 5 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGALMLF*GSKGIS
Trigger: GGAGATACCCTTGGAGCCCAAAAACAACATGAGGGC...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGATGTTGGGCTGGCTCTaGTCCTTATCCACCGTGGCT +
Preference number: 5 (lower is better)
Translates to: VASSLSESPLSAHTLIRVMLGWL*SLSTVA
Trigger: AGCCACGGTGGATAAGGACAAGAGCCAGCCCAACAT...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTGCTCAGCCTCTGACCTaGACTGACCGGGGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPAQPLT*TDRGRA
Trigger: GGCCCGCCCCCGGTCAGTCAAGGTCAGAGGCTGAGC...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CAA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGCTTAGTGCCCATACATaGATCCGCGTGTGGACTCCG +
Preference number: 5 (lower is better)
Translates to: VASSLSESPLSAHTLIRVLSAHT*IRVWTP
Trigger: CGGAGTCCACACGCGGATCAATGTATGGGCACTAAG...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGCTTAGTGCCCATACATaGATCCGCGTGTGGACTCCG +
Preference number: 5 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMLSAHT*IRVWTP
Trigger: CGGAGTCCACACGCGGATCAATGTATGGGCACTAAG...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTTGGTCACGCGTACAGGAGGTaGAGCTACCAGGAGGCCGTT +
Preference number: 5 (lower is better)
Translates to: GFGFLQPVSWALGSRSFGHAYRR*SYQEAV
Trigger: AACGGCCTCCTGGTAGCTCAACCTCCTGTACGCGTG...ACCAAAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp CAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGGTATCTCCAGGACTTaGGTGTTGCCCACTATCTTC +
Preference number: 5 (lower is better)
Translates to: QRKTRGDWVRSVETVGRKGISRT*VLPTIF
Trigger: GAAGATAGTGGGCAACACCAAAGTCCTGGAGATACC...CTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGAGGTATCTCCAGGACTTaGGTGTTGCCCACTATCTTC +
Preference number: 5 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGGISRT*VLPTIF
Trigger: GAAGATAGTGGGCAACACCAAAGTCCTGGAGATACC...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGGGTATCTCCAGGACTTaGGTGTTGCCCACTATCTTC +
Preference number: 5 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVGISRT*VLPTIF
Trigger: GAAGATAGTGGGCAACACCAAAGTCCTGGAGATACC...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGGCCCTCATGTTGTTTTaGGGCTCCAAGGGTATCTCC +
Preference number: 5 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMALMLF*GSKGIS
Trigger: GGAGATACCCTTGGAGCCCAAAAACAACATGAGGGC...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGCCGCACAGTCGATGGTaGCCCTCATGTTGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: VASSLSESPLSAHTLIRVPHSRW*PSCCFW
Trigger: CCAAAAACAACATGAGGGCAACCATCGACTGTGCGG...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTCCCCGTGAGGATCATTaGCTGGCCGCCATAGACCAG +
Preference number: 5 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFPREDH*LAAIDQ
Trigger: CTGGTCTATGGCGGCCAGCAAATGATCCTCACGGGG...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CAA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCGGTGTGCGGATATGCTaGTTCCGATATTCAGGGATC +
Preference number: 5 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGGVRIC*FRYSGI
Trigger: GATCCCTGAATATCGGAACAAGCATATCCGCACACC...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp CTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGAGAAATCCGTGGGCTCCGTCTaGATGGCTGGGACTGGGTGG +
Preference number: 5 (lower is better)
Translates to: LTTHSWLFPSEVNIAGEKSVGSV*MAGTGW
Trigger: CCACCCAGTCCCAGCCATCAAGACGGAGCCCACGGA...TTTCTCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCCTTAGTGCCCATACATaGATCCGCGTGTGGACTCCG +
Preference number: 5 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFLSAHT*IRVWTP
Trigger: CGGAGTCCACACGCGGATCAATGTATGGGCACTAAG...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTTAGCTGTGGCCCAGTaGTGGCATGGACTGGGCGAG +
Preference number: 5 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKLAVAQ*WHGLGE
Trigger: CTCGCCCAGTCCATGCCACAACTGGGCCACAGCTAA...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGATACCTCTGGGTAACCTaGACGGGAGAGCCAGGACTT +
Preference number: 5 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRYLWVT*TGEPGL
Trigger: AAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTA...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GGAAGCTTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCTACCTCTGGGTAACCTaGACGGGAGAGCCAGGACTT +
Preference number: 5 (lower is better)
Translates to: GSFYLWVTLTGEPGLTKPYLWVT*TGEPGL
Trigger: AAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTA...GGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp ATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCACTTGGGCGGGTCACCGAGCACCTaGCCTCCGGGAAACAAGTTC +
Preference number: 5 (lower is better)
Translates to: IQPFSSILVETHLQKHLGGSPST*PPGNKF
Trigger: GAACTTGTTTCCCGGAGGCAAGGTGCTCGGTGACCC...GCCCAAGTGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTGAGGCCCCTGCTGGCTaGGCCGCGCTCAGAAACTTC +
Preference number: 5 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGIEAPAG*AALRNF
Trigger: GAAGTTTCTGAGCGCGGCCAAGCCAGCAGGGGCCTC...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp CTGAGCATTTTGCCTTCTATCTGGAGTGCCAAACACACCTGGCCCCACTCCCAGGGTATCTCCAGGACTTaGGTGTTGCCCACTATCTTC +
Preference number: 5 (lower is better)
Translates to: LSILPSIWSAKHTWPHSQGISRT*VLPTIF
Trigger: GAAGATAGTGGGCAACACCAAAGTCCTGGAGATACC...CTGGGAGTGGGGCCAGGTGTGTTTGGCACTCCAGATAGAAGGCAAAATGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGGGTATCTCCAGGACTTaGGTGTTGCCCACTATCTTC +
Preference number: 5 (lower is better)
Translates to: VASSLSESPLSAHTLIRVGISRT*VLPTIF
Trigger: GAAGATAGTGGGCAACACCAAAGTCCTGGAGATACC...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACGCCCTCATGTTGTTTTaGGGCTCCAAGGGTATCTCC +
Preference number: 5 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDALMLF*GSKGIS
Trigger: GGAGATACCCTTGGAGCCCAAAAACAACATGAGGGC...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGATGGTTGCCCTCATGTaGTTTTTGGGCTCCAAGGGT +
Preference number: 5 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMMVALM*FLGSKG
Trigger: ACCCTTGGAGCCCAAAAACAACATGAGGGCAACCAT...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACCCGCACAGTCGATGGTaGCCCTCATGTTGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDPHSRW*PSCCFW
Trigger: CCAAAAACAACATGAGGGCAACCATCGACTGTGCGG...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp TGCACATGCTTGAGATTCTCCACCGCTTTACGGAAAAGCACTCTGGCTGCTAGGATGTTGGGCTGGCTCTaGTCCTTATCCACCGTGGCT +
Preference number: 5 (lower is better)
Translates to: CTCLRFSTALRKSTLAARMLGWL*SLSTVA
Trigger: AGCCACGGTGGATAAGGACAAGAGCCAGCCCAACAT...CCTAGCAGCCAGAGTGCTTTTCCGTAAAGCGGTGGAGAATCTCAAGCATGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp TTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGGTTTTTGGCGGCTCTTaGGCTCGTGGCATTCTGCTG +
Preference number: 5 (lower is better)
Translates to: FYLWVTLTGEPGLTKPTVVFGGS*ARGILL
Trigger: CAGCAGAATGCCACGAGCCAAAGAGCCGCCAAAAAC...CACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp TGCTTTGGTTCCACGAAACGTAATGCCCTAGCCTCGAGCCTAGGAGACCCAAGGTTGGGTCACGTTCCTTaGGTTGCTCTGAGAACTCCT +
Preference number: 5 (lower is better)
Translates to: CFGSTKRNALASSLGDPRLGHVP*VALRTP
Trigger: AGGAGTTCTCAGAGCAACCAAAGGAACGTGACCCAA...CCTTGGGTCTCCTAGGCTCGAGGCTAGGGCATTACGTTTCGTGGAACCAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp GACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGAGGGGCTGTGGACCCACACTTCTTTTCTaGGTTGCTTTAGCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: DSGLGDEHERRQKVRGCGPTLLF*VALALL
Trigger: CAGAAGGGCTAAAGCAACCAAGAAAAGAAGTGTGGG...TCCACAGCCCCTCACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp TGCTTTGGTTCCACGAAACGTAATGCCCTAGCCTCGAGCCTAGGAGACCCAAGGCCGAATCTGAGCATTTaGCCTTCTATCTGGAGTGCC +
Preference number: 5 (lower is better)
Translates to: CFGSTKRNALASSLGDPRPNLSI*PSIWSA
Trigger: GGCACTCCAGATAGAAGGCAAAATGCTCAGATTCGG...CCTTGGGTCTCCTAGGCTCGAGGCTAGGGCATTACGTTTCGTGGAACCAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp GGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGGGAGGAAGGAAACCGAATCTGAGCATTTaGCCTTCTATCTGGAGTGCC +
Preference number: 5 (lower is better)
Translates to: GRLGETGCAQWKQLGGRKPNLSI*PSIWSA
Trigger: GGCACTCCAGATAGAAGGCAAAATGCTCAGATTCGG...TTTCCTTCCTCCCAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GGAAGCTTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCTTCGAGGTGACATTATaGGCGAGGTTCTGGGGGAAT +
Preference number: 5 (lower is better)
Translates to: GSFYLWVTLTGEPGLTKPFEVTL*ARFWGN
Trigger: ATTCCCCCAGAACCTCGCCAATAATGTCACCTCGAA...GGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTTGGTGCCCTCATGTTGTTTTaGGGCTCCAAGGGTATCTCC +
Preference number: 5 (lower is better)
Translates to: GFGFLQPVSWALGSRSFGALMLF*GSKGIS
Trigger: GGAGATACCCTTGGAGCCCAAAAACAACATGAGGGC...ACCAAAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGATGGTTGCCCTCATGTaGTTTTTGGGCTCCAAGGGT +
Preference number: 5 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKMVALM*FLGSKG
Trigger: ACCCTTGGAGCCCAAAAACAACATGAGGGCAACCAT...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCATGGTTGCCCTCATGTaGTTTTTGGGCTCCAAGGGT +
Preference number: 5 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFMVALM*FLGSKG
Trigger: ACCCTTGGAGCCCAAAAACAACATGAGGGCAACCAT...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp CACACCCACAGAGGAAGACTAGGGGAGACTGGGTGCGCTCAGTGGAAACAGTTGTTCCATCTCCCAAATTaGCTGTCCATCTGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: HTHRGRLGETGCAQWKQLFHLPN*LSICGL
Trigger: AAGACCACAGATGGACAGCAAATTTGGGAGATGGAA...CAACTGTTTCCACTGAGCGCACCCAGTCTCCCCTAGTCTTCCTCTGTGGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp TGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGGGCACTGAGTTCCATCTCCCAAATTaGCTGTCCATCTGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: WVTLTGEPGLTKPTVGTEFHLPN*LSICGL
Trigger: AAGACCACAGATGGACAGCAAATTTGGGAGATGGAA...CTCAGTGCCCACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTCAACAAAAAGCATGTaGGGCTGGCTCTTGTCCTTA +
Preference number: 5 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGSTKSM*GWLLSL
Trigger: TAAGGACAAGAGCCAGCCCAACATGCTTTTTGTTGA...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAGGTGTGCGGATATGCTaGTTCCGATATTCAGGGATC +
Preference number: 5 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRGVRIC*FRYSGI
Trigger: GATCCCTGAATATCGGAACAAGCATATCCGCACACC...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp ATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGGTGTGCGGATATGCTaGTTCCGATATTCAGGGATC +
Preference number: 5 (lower is better)
Translates to: IDPRVDSGLGDEHERRQKGVRIC*FRYSGI
Trigger: GATCCCTGAATATCGGAACAAGCATATCCGCACACC...CTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGGTTTTTGGCGGCTCTTaGGCTCGTGGCATTCTGCTG +
Preference number: 5 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKVFGGS*ARGILL
Trigger: CAGCAGAATGCCACGAGCCAAAGAGCCGCCAAAAAC...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTGTTTTTGGCGGCTCTTaGGCTCGTGGCATTCTGCTG +
Preference number: 5 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFVFGGS*ARGILL
Trigger: CAGCAGAATGCCACGAGCCAAAGAGCCGCCAAAAAC...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CAA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTGCTCTGAGAACTCCTaGCCTTCAAAAGGTACAGGA +
Preference number: 5 (lower is better)
Translates to: VASSLSESPLSAHTLIRVCSENS*PSKGTG
Trigger: TCCTGTACCTTTTGAAGGCAAGGAGTTCTCAGAGCA...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp CGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTTTGGGTCACGTTCCTTaGGTTGCTCTGAGAACTCCT +
Preference number: 5 (lower is better)
Translates to: RGFWVSSACKLGSWVTFLLGHVP*VALRTP
Trigger: AGGAGTTCTCAGAGCAACCAAAGGAACGTGACCCAA...AAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp TGCTTTGGTTCCACGAAACGTAATGCCCTAGCCTCGAGCCTAGGAGACCCAAGGCCCACACTTCTTTTCTaGGTTGCTTTAGCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: CFGSTKRNALASSLGDPRPTLLF*VALALL
Trigger: CAGAAGGGCTAAAGCAACCAAGAAAAGAAGTGTGGG...CCTTGGGTCTCCTAGGCTCGAGGCTAGGGCATTACGTTTCGTGGAACCAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp CTGAGCATTTTGCCTTCTATCTGGAGTGCCAAACACACCTGGCCCCACTCCCAGCCCACACTTCTTTTCTaGGTTGCTTTAGCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: LSILPSIWSAKHTWPHSQPTLLF*VALALL
Trigger: CAGAAGGGCTAAAGCAACCAAGAAAAGAAGTGTGGG...CTGGGAGTGGGGCCAGGTGTGTTTGGCACTCCAGATAGAAGGCAAAATGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp TGCTTTGGTTCCACGAAACGTAATGCCCTAGCCTCGAGCCTAGGAGACCCAAGGCATGAGCCATCCTTCTaGGCAAAATTTCCTCCTAGC +
Preference number: 5 (lower is better)
Translates to: CFGSTKRNALASSLGDPRHEPSF*AKFPPS
Trigger: GCTAGGAGGAAATTTTGCCAAGAAGGATGGCTCATG...CCTTGGGTCTCCTAGGCTCGAGGCTAGGGCATTACGTTTCGTGGAACCAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp GAACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGGTGCCTCCCAGTTCTTaGAAGGAATCAATTCATCCT +
Preference number: 5 (lower is better)
Translates to: EQLAKTAPGLGALVSLLKVPPSS*KESIHP
Trigger: AGGATGAATTGATTCCTTCAAAGAACTGGGAGGCAC...CTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGCTGTTTGTTGGAGAATaGGTTTTCTCTCCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVLFVGE*VFSPLR
Trigger: CCTCAGAGGAGAGAAAACCAATTCTCCAACAAACAG...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTGCCAGCACCACCATGTaGGAGAGACCTGTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFASTTM*ERPVCW
Trigger: CCAACAAACAGGTCTCTCCAACATGGTGGTGCTGGC...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371564.8
CDS-3UTR CAA 90 bp CATATTTACATTAACTTAGATGTAGCAGTGCAAACCTTCACTCAACTGAGATCCTCGGGCCCGCCGTTATaGGGCGAGACGCAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: HIYINLDVAVQTFTQLRSSGPPL*GETQGE
Trigger: CTCGCCCTGCGTCTCGCCCAATAACGGCGGGCCCGA...GGATCTCAGTTGAGTGAAGGTTTGCACTGCTACATCTAAGTTAATGTAAATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp ACAATACAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTTCGGGCCCGCCGTTATaGGGCGAGACGCAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: TIQEDLQTLEIYYIQQHGSGPPL*GETQGE
Trigger: CTCGCCCTGCGTCTCGCCCAATAACGGCGGGCCCGA...ACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GGGCGAGCTCTAAGGACTGACAGTTCAGTTTCTGTCTCTATCGAGGGTTTTGGGTTCGAGGTGACATTATaGGCGAGGTTCTGGGGGAAT +
Preference number: 5 (lower is better)
Translates to: GRALRTDSSVSVSIEGFGFEVTL*ARFWGN
Trigger: ATTCCCCCAGAACCTCGCCAATAATGTCACCTCGAA...CCCAAAACCCTCGATAGAGACAGAAACTGAACTGTCAGTCCTTAGAGCTCGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGTTCCATCTCCCAAATTaGCTGTCCATCTGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMFHLPN*LSICGL
Trigger: AAGACCACAGATGGACAGCAAATTTGGGAGATGGAA...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTCAACAAAAAGCATGTaGGGCTGGCTCTTGTCCTTA +
Preference number: 5 (lower is better)
Translates to: VASSLSESPLSAHTLIRVSTKSM*GWLLSL
Trigger: TAAGGACAAGAGCCAGCCCAACATGCTTTTTGTTGA...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp TGCACATGCTTGAGATTCTCCACCGCTTTACGGAAAAGCACTCTGGCTGCTAGGGGTGTGCGGATATGCTaGTTCCGATATTCAGGGATC +
Preference number: 5 (lower is better)
Translates to: CTCLRFSTALRKSTLAARGVRIC*FRYSGI
Trigger: GATCCCTGAATATCGGAACAAGCATATCCGCACACC...CCTAGCAGCCAGAGTGCTTTTCCGTAAAGCGGTGGAGAATCTCAAGCATGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCTCCGTGGGCTCCGTCTaGATGGCTGGGACTGGGTGG +
Preference number: 5 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVSVGSV*MAGTGW
Trigger: CCACCCAGTCCCAGCCATCAAGACGGAGCCCACGGA...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp CATATTTACATTAACTTAGATGTAGCAGTGCAAACCTTCACTCAACTGAGATCCGCTCAGCCTCTGACCTaGACTGACCGGGGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: HIYINLDVAVQTFTQLRSAQPLT*TDRGRA
Trigger: GGCCCGCCCCCGGTCAGTCAAGGTCAGAGGCTGAGC...GGATCTCAGTTGAGTGAAGGTTTGCACTGCTACATCTAAGTTAATGTAAATATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCCATGAGCCATCCTTCTaGGCAAAATTTCCTCCTAGC +
Preference number: 5 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFHEPSF*AKFPPS
Trigger: GCTAGGAGGAAATTTTGCCAAGAAGGATGGCTCATG...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp TGCTTTGGTTCCACGAAACGTAATGCCCTAGCCTCGAGCCTAGGAGACCCAAGGCTGTTTGTTGGAGAATaGGTTTTCTCTCCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: CFGSTKRNALASSLGDPRLFVGE*VFSPLR
Trigger: CCTCAGAGGAGAGAAAACCAATTCTCCAACAAACAG...CCTTGGGTCTCCTAGGCTCGAGGCTAGGGCATTACGTTTCGTGGAACCAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTGCATTCGGCTCTTCTaGGTCCACAGACCCCATGAT +
Preference number: 5 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFCIRLF*VHRPHD
Trigger: ATCATGGGGTCTGTGGACCAAGAAGAGCCGAATGCA...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414705.5
CDS TCA 90 bp GATGCAGTCTGTAAAGAGACGATTCTGCCACTGGACTCTGGGATGTaGACTCGGAAAACCAGTCTCACCCGCGTGTTCTTTCTTCCAATG +
Preference number: 5 (lower is better)
Translates to: DAVCKETILPLDSGM*TRKTSLTRVFFLPM
Trigger: CATTGGAAGAAAGAACACGCGGGTGAGACTGGTTTTCCGAGTTCACATCCCAGAGTCCAGTGGCAGAATCGTCTCTTTACAGACTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp AGTTTCTGTCTCTATCGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTCCGCACAGTCGATGGTaGCCCTCATGTTGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: SFCLYRGFWVSSACKLGSPHSRW*PSCCFW
Trigger: CCAAAAACAACATGAGGGCAACCATCGACTGTGCGG...AGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCGATAGAGACAGAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTCAGTAAACACAACTTaGGACTCGGATGTAAAGTTC +
Preference number: 5 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGSVNTT*DSDVKF
Trigger: GAACTTTACATCCGAGTCCAAAGTTGTGTTTACTGA...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp GATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAAGGTGTCAGTAAACACAACTTaGGACTCGGATGTAAAGTTC +
Preference number: 5 (lower is better)
Translates to: DPRVDSGLGDEHERRQKVSVNTT*DSDVKF
Trigger: GAACTTTACATCCGAGTCCAAAGTTGTGTTTACTGA...CACCTTCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp CATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACTTCCATCTCCCAAATTaGCTGTCCATCTGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: HTLIRVWTPGWEMNMKGDFHLPN*LSICGL
Trigger: AAGACCACAGATGGACAGCAAATTTGGGAGATGGAA...GTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTCCATCTCCCAAATTaGCTGTCCATCTGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFFHLPN*LSICGL
Trigger: AAGACCACAGATGGACAGCAAATTTGGGAGATGGAA...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp AAAGCATACAGGAGTTATCTACCAGGATTTAGATTTGGTCCCTTCTGTAAATATGCTCAGCCTCTGACCTaGACTGACCGGGGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: KAYRSYLPGFRFGPFCKYAQPLT*TDRGRA
Trigger: GGCCCGCCCCCGGTCAGTCAAGGTCAGAGGCTGAGC...ATATTTACAGAAGGGACCAAATCTAAATCCTGGTAGATAACTCCTGTATGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGAAGCAAGCCGGAACCTaGCAAAGCATCCAGGTTGTA +
Preference number: 5 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKKQAGT*QSIQVV
Trigger: TACAACCTGGATGCTTTGCAAGGTTCCGGCTTGCTT...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp TGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCACAGTGGGCACTGAGATTAAATGCACATGCTaGAGATTCTCCACCGCTTTA +
Preference number: 5 (lower is better)
Translates to: WVTLTGEPGLTKPTVGTEIKCTC*RFSTAL
Trigger: TAAAGCGGTGGAGAATCTCAAGCATGTGCATTTAAT...CTCAGTGCCCACTGTGGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp ACAGCTCGCCAAGACAGCTCCAGGGCTAGGTGCCCTGGTCAGCCTTTTAAAGCAATTAAATGCACATGCTaGAGATTCTCCACCGCTTTA +
Preference number: 5 (lower is better)
Translates to: TARQDSSRARCPGQPFKAIKCTC*RFSTAL
Trigger: TAAAGCGGTGGAGAATCTCAAGCATGTGCATTTAAT...TGCTTTAAAAGGCTGACCAGGGCACCTAGCCCTGGAGCTGTCTTGGCGAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GGAAGCTTTTACCTCTGGGTAACCTTGACGGGAGAGCCAGGACTTACAAAGCCCCTTTGCTGCGGATTATaGAGGAAACAACTGAATGGC +
Preference number: 5 (lower is better)
Translates to: GSFYLWVTLTGEPGLTKPLCCGL*RKQLNG
Trigger: GCCATTCAGTTGTTTCCTCAATAATCCGCAGCAAAG...GGGCTTTGTAAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTAAAAGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp ACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGAAAGGAGACAGAATTTTGCTAAACTCTTaGAGCTTAGGGTGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: TLIRVWTPGWEMNMKGDRILLNS*SLGWVR
Trigger: CCTCACCCACCCTAAGCTCAAAGAGTTTAGCAAAAT...TCTGTCTCCTTTCATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp CGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTATACTTGCTATGCAATaGGCTGCTTTGGTTCCACGA +
Preference number: 5 (lower is better)
Translates to: RGFWVSSACKLGSWVTFLILAMQ*AALVPR
Trigger: TCGTGGAACCAAAGCAGCCAATTGCATAGCAAGTAT...AAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp GGGCTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCAATGCAGGAAAATACTaGCTATGCAATTGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: GLWRAPRGQIQKVSCYNGNAGKY*LCNWLL
Trigger: AAGCAGCCAATTGCATAGCAAGTATTTTCCTGCATT...GCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCGGAGAGACCTGTTTGTaGGAGAATTGGTTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFGETCL*ENWFSL
Trigger: GAGAGAAAACCAATTCTCCAACAAACAGGTCTCTCC...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTTTCGAGGTGACATTATaGGCGAGGTTCTTCGTTCGG +
Preference number: 5 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFFEVTL*ARFFVR
Trigger: CCGAACGAAGAACCTCGCCAATAATGTCACCTCGAA...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000610033.5
CDS-3UTR CAA 90 bp GGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTTTATTGGCGAGGTTCTaGGTCCACAGACCCCATGAT +
Preference number: 5 (lower is better)
Translates to: GGLRGVRYRRCLAIMASFLLARF*VHRPHD
Trigger: ATCATGGGGTCTGTGGACCAAGAACCTCGCCAATAA...AAAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609507.1
CDS CCA 90 bp TCTCAACAAAAAGCATGTTGGGCTGGCTCTTGTCCTTATCCACCGTaGCTTCCATCTCCCAAATTTGCTGTCCATCTGTGGTCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: SQQKACWAGSCPYPP*LPSPKFAVHLWSSQ
Trigger: CTGAGAAGACCACAGATGGACAGCAAATTTGGGAGATGGAAGCCACGGTGGATAAGGACAAGAGCCAGCCCAACATGCTTTTTGTTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp CTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAGAGAAAGCCCTCATGTTGTTTTaGGGCTCCAAGGGTATCTCC +
Preference number: 5 (lower is better)
Translates to: LTTHSWLFPSEVNIAGEKALMLF*GSKGIS
Trigger: GGAGATACCCTTGGAGCCCAAAAACAACATGAGGGC...TTTCTCTCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCCCCCGTGAGGATCATTaGCTGGCCGCCATAGACCAG +
Preference number: 5 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVPREDH*LAAIDQ
Trigger: CTGGTCTATGGCGGCCAGCAAATGATCCTCACGGGG...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GTGGCGAGCTCCTTAAGTGAGAGTCCGCTTAGTGCCCATACATTGATCCGCGTGTCAGTAAACACAACTTaGGACTCGGATGTAAAGTTC +
Preference number: 5 (lower is better)
Translates to: VASSLSESPLSAHTLIRVSVNTT*DSDVKF
Trigger: GAACTTTACATCCGAGTCCAAAGTTGTGTTTACTGA...CACGCGGATCAATGTATGGGCACTAAGCGGACTCTCACTTAAGGAGCTCGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAATGTTGGGCTGGCTCTaGTCCTTATCCACCGTGGCT +
Preference number: 5 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGMLGWL*SLSTVA
Trigger: AGCCACGGTGGATAAGGACAAGAGCCAGCCCAACAT...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTATGTTGGGCTGGCTCTaGTCCTTATCCACCGTGGCT +
Preference number: 5 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPMLGWL*SLSTVA
Trigger: AGCCACGGTGGATAAGGACAAGAGCCAGCCCAACAT...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CAA 90 bp GAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACACCGGGGGTCCGTTTTaGGCGGCTCTTTGGCTCGTG +
Preference number: 5 (lower is better)
Translates to: EIYYIQQHGRPVRVLHIYTGGPF*AALWLV
Trigger: CACGAGCCAAAGAGCCGCCAAAAACGGACCCCCGGT...GTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATACCTCTGGGTAACCTaGACGGGAGAGCCAGGACTT +
Preference number: 5 (lower is better)
Translates to: VRTNHSPHTLGFSPVKSIYLWVT*TGEPGL
Trigger: AAGTCCTGGCTCTCCCGTCAAGGTTACCCAGAGGTA...TATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGAGATGGTATCGACCGACAGGTaGCATACAAGTGCACAGGCC +
Preference number: 5 (lower is better)
Translates to: EQEKGDSFFHKAIPSPEMVSTDR*HTSAQA
Trigger: GGCCTGTGCACTTGTATGCAACCTGTCGGTCGATAC...CATCTCAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp AACTCCTTGCCTTCAAAAGGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAAGTATCGACCGACAGGTaGCATACAAGTGCACAGGCC +
Preference number: 5 (lower is better)
Translates to: NSLPSKGTGAVSVTWKNEVSTDR*HTSAQA
Trigger: GGCCTGTGCACTTGTATGCAACCTGTCGGTCGATAC...TTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACCTTTTGAAGGCAAGGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GGGCGAGCTCTAAGGACTGACAGTTCAGTTTCTGTCTCTATCGAGGGTTTTGGGATACTTGCTATGCAATaGGCTGCTTTGGTTCCACGA +
Preference number: 5 (lower is better)
Translates to: GRALRTDSSVSVSIEGFGILAMQ*AALVPR
Trigger: TCGTGGAACCAAAGCAGCCAATTGCATAGCAAGTAT...CCCAAAACCCTCGATAGAGACAGAAACTGAACTGTCAGTCCTTAGAGCTCGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp GAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGAGATGGCCAGCACCACCATGTaGGAGAGACCTGTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: EQEKGDSFFHKAIPSPEMASTTM*ERPVCW
Trigger: CCAACAAACAGGTCTCTCCAACATGGTGGTGCTGGC...CATCTCAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTGAAAGGGGGATCTGTTaGTATCGACCAGCAGCCGAG +
Preference number: 5 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPERGIC*YRPAAE
Trigger: CTCGGCTGCTGGTCGATACAAACAGATCCCCCTTTC...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609507.1
CDS-3UTR CAA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTCCGCACAGTCGATGGTaGCCCTCATGTTGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGIPHSRW*PSCCFW
Trigger: CCAAAAACAACATGAGGGCAACCATCGACTGTGCGG...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp CTGTGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTCAGTAAACACAACTTaGGACTCGGATGTAAAGTTC +
Preference number: 5 (lower is better)
Translates to: LWRAPRGQIQKVSCYNGFSVNTT*DSDVKF
Trigger: GAACTTTACATCCGAGTCCAAAGTTGTGTTTACTGA...GAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS-3UTR CAA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTTCAACAAAAAGCATGTaGGGCTGGCTCTTGTCCTTA +
Preference number: 5 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFSTKSM*GWLLSL
Trigger: TAAGGACAAGAGCCAGCCCAACATGCTTTTTGTTGA...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CAA 90 bp GGTCGAGTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGGCAGGTGCTTACTATTaGGACGGAACACCATTAAGA +
Preference number: 5 (lower is better)
Translates to: GRVRTNHSPHTLGFSPVKAGAYY*DGTPLR
Trigger: TCTTAATGGTGTTCCGTCCAAATAGTAAGCACCTGC...CTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCACTCGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp AACTCCTTGCCTTCAAAAGGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAATGCAAAGCATCCAGGTaGTACAGCTGCAGCAGACAG +
Preference number: 5 (lower is better)
Translates to: NSLPSKGTGAVSVTWKNECKASR*YSCSRQ
Trigger: CTGTCTGCTGCAGCTGTACAACCTGGATGCTTTGCA...TTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACCTTTTGAAGGCAAGGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp CGCTTGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAGGAGGATCTAGACACTaGATGATTCTCAGTGACCAG +
Preference number: 5 (lower is better)
Translates to: RLSWGICSTCKQKQTHLPGGSRH*MILSDQ
Trigger: CTGGTCACTGAGAATCATCAAGTGTCTAGATCCTCC...TGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp CTTAGTGCCCATACATTGATCCGCGTGTGGACTCCGGGCTGGGAGATGAACATGGGAATCAATTCATCCTaGGTTATATCTATGCTGGAA +
Preference number: 5 (lower is better)
Translates to: LSAHTLIRVWTPGWEMNMGINSS*VISMLE
Trigger: TTCCAGCATAGATATAACCAAGGATGAATTGATTCC...CATGTTCATCTCCCAGCCCGGAGTCCACACGCGGATCAATGTATGGGCACTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp CGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTTGGGTCACGTTCCTTAATGCAGGAAAATACTaGCTATGCAATTGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: RGFWVSSACKLGSWVTFLNAGKY*LCNWLL
Trigger: AAGCAGCCAATTGCATAGCAAGTATTTTCCTGCATT...AAGGAACGTGACCCAAGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTGGAGAGACCTGTTTGTaGGAGAATTGGTTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFGETCL*ENWFSL
Trigger: GAGAGAAAACCAATTCTCCAACAAACAGGTCTCTCC...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371564.8
CDS-3UTR CAA 90 bp TGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAAGAATTCGAGGTGACATTATaGGCGAGGTTCTGGGGGAAT +
Preference number: 5 (lower is better)
Translates to: CPGVSAVHANRNKHICQEFEVTL*ARFWGN
Trigger: ATTCCCCCAGAACCTCGCCAATAATGTCACCTCGAA...TTCTTGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTTTCGAGGTGACATTATaGGCGAGGTTCTGGGGGAAT +
Preference number: 5 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPFEVTL*ARFWGN
Trigger: ATTCCCCCAGAACCTCGCCAATAATGTCACCTCGAA...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000414705.5
CDS-3UTR CAA 90 bp CTGTCTCATGTAGAATGTGCTTTTGGTCAGCAGGTGCTTACTATTTGGACGGAAATGGTTGCCCTCATGTaGTTTTTGGGCTCCAAGGGT +
Preference number: 5 (lower is better)
Translates to: LSHVECAFGQQVLTIWTEMVALM*FLGSKG
Trigger: ACCCTTGGAGCCCAAAAACAACATGAGGGCAACCAT...TTCCGTCCAAATAGTAAGCACCTGCTGACCAAAAGCACATTCTACATGAGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGAATGGTTGCCCTCATGTaGTTTTTGGGCTCCAAGGGT +
Preference number: 5 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGMVALM*FLGSKG
Trigger: ACCCTTGGAGCCCAAAAACAACATGAGGGCAACCAT...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTGGTGTGCGGATATGCTaGTTCCGATATTCAGGGATC +
Preference number: 5 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPGVRIC*FRYSGI
Trigger: GATCCCTGAATATCGGAACAAGCATATCCGCACACC...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000414705.5
ENST00000609507.1
ENST00000610033.5
CDS-3UTR CAA 90 bp AGCTGTATCTGTGACCTGGAAAAACGAACGCAAGGGCTGGGGTTTAATCACAGTGCAGGTGCTTACTATTaGGACGGAACACCATTAAGA +
Preference number: 5 (lower is better)
Translates to: SCICDLEKRTQGLGFNHSAGAYY*DGTPLR
Trigger: TCTTAATGGTGTTCCGTCCAAATAGTAAGCACCTGC...ACTGTGATTAAACCCCAGCCCTTGCGTTCGTTTTTCCAGGTCACAGATACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp TGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAAGAAAAGCAAGCCGGAACCTaGCAAAGCATCCAGGTTGTA +
Preference number: 5 (lower is better)
Translates to: CPGVSAVHANRNKHICQEKQAGT*QSIQVV
Trigger: TACAACCTGGATGCTTTGCAAGGTTCCGGCTTGCTT...TTCTTGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCGTATCGACCGACAGGTaGCATACAAGTGCACAGGCC +
Preference number: 5 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVVSTDR*HTSAQA
Trigger: GGCCTGTGCACTTGTATGCAACCTGTCGGTCGATAC...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp ACAATACAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTCACGCGTACAGGAGGTaGAGCTACCAGGAGGCCGTT +
Preference number: 5 (lower is better)
Translates to: TIQEDLQTLEIYYIQQHGHAYRR*SYQEAV
Trigger: AACGGCCTCCTGGTAGCTCAACCTCCTGTACGCGTG...ACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp AGAGGGAATTCAGCCCTTTTCCTCTATCTTGGTAGAAACCCACCTCCAGAAGCAGTGCCTCCCAGTTCTTaGAAGGAATCAATTCATCCT +
Preference number: 5 (lower is better)
Translates to: RGNSALFLYLGRNPPPEAVPPSS*KESIHP
Trigger: AGGATGAATTGATTCCTTCAAAGAACTGGGAGGCAC...TGCTTCTGGAGGTGGGTTTCTACCAAGATAGAGGAAAAGGGCTGAATTCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp TGGAGGGCTCCGAGGGGTCAGATACAGAAGGTGTCTTGCTATAATGGCTTCTTTGTTGGAGAGACCTGTTaGTTGGAGAATTGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: WRAPRGQIQKVSCYNGFFVGETC*LENWFS
Trigger: AGAAAACCAATTCTCCAACAAACAGGTCTCTCCAAC...AAAGAAGCCATTATAGCAAGACACCTTCTGTATCTGACCCCTCGGAGCCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371564.8
CDS-3UTR CAA 90 bp GCTATAATGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTGAAAACTCCTTTCGAGGTGACATTATaGGCGAGGTTCTTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: AIMASFTSDFWQEVLKTPFEVTL*ARFLVH
Trigger: GTGGACCAAGAACCTCGCCAATAATGTCACCTCGAA...AGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCATTATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609507.1
CDS-3UTR CAA 90 bp TGTCCTGGGGTATCTGCAGTACATGCAAACAGAAACAAACACATCTGCCAAGAATGCTCTGAGAACTCCTaGCCTTCAAAAGGTACAGGA +
Preference number: 5 (lower is better)
Translates to: CPGVSAVHANRNKHICQECSENS*PSKGTG
Trigger: TCCTGTACCTTTTGAAGGCAAGGAGTTCTCAGAGCA...TTCTTGGCAGATGTGTTTGTTTCTGTTTGCATGTACTGCAGATACCCCAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp AAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATATTGCTGGATGCTCTGAGAACTCCTaGCCTTCAAAAGGTACAGGA +
Preference number: 5 (lower is better)
Translates to: KSLTTHSWLFPSEVNIAGCSENS*PSKGTG
Trigger: TCCTGTACCTTTTGAAGGCAAGGAGTTCTCAGAGCA...TCCAGCAATATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp ATTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTTGCAAAGCATCCAGGTaGTACAGCTGCAGCAGACAG +
Preference number: 5 (lower is better)
Translates to: ILEQEKGDSFFHKAIPSPCKASR*YSCSRQ
Trigger: CTGTCTGCTGCAGCTGTACAACCTGGATGCTTTGCA...AGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp AGTTTCTGTCTCTATCGAGGGTTTTGGGTTTCTTCAGCCTGTAAGCTGGGCTCTGGGAAAGGTCGTTCATaGTCAGGGAAAAATAAATGC +
Preference number: 5 (lower is better)
Translates to: SFCLYRGFWVSSACKLGSGKGRS*SGKNKC
Trigger: GCATTTATTTTTCCCTGACAATGAACGACCTTTCCC...AGAGCCCAGCTTACAGGCTGAAGAAACCCAAAACCCTCGATAGAGACAGAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp AACTCCTTGCCTTCAAAAGGTACAGGAGCTGTATCTGTGACCTGGAAAAACGAAGGAGGATCTAGACACTaGATGATTCTCAGTGACCAG +
Preference number: 5 (lower is better)
Translates to: NSLPSKGTGAVSVTWKNEGGSRH*MILSDQ
Trigger: CTGGTCACTGAGAATCATCAAGTGTCTAGATCCTCC...TTCGTTTTTCCAGGTCACAGATACAGCTCCTGTACCTTTTGAAGGCAAGGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTTCAACAAAAAGCATGTaGGGCTGGCTCTTGTCCTTA +
Preference number: 5 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGISTKSM*GWLLSL
Trigger: TAAGGACAAGAGCCAGCCCAACATGCTTTTTGTTGA...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp TACTTTCTCATTCTCTTAGAGGATCTTATTGCCTCTTCCCGTACTGGAAATATTCTTAGTGCCCATACATaGATCCGCGTGTGGACTCCG +
Preference number: 5 (lower is better)
Translates to: YFLILLEDLIASSRTGNILSAHT*IRVWTP
Trigger: CGGAGTCCACACGCGGATCAATGTATGGGCACTAAG...AATATTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAGAGAATGAGAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GTGCGGATAGGTCTTCAGGGGCAGAAGGGATCTTTAAATAGGTTCAGGTCAAATGGGAAAGGTCGTTCATaGTCAGGGAAAAATAAATGC +
Preference number: 5 (lower is better)
Translates to: VRIGLQGQKGSLNRFRSNGKGRS*SGKNKC
Trigger: GCATTTATTTTTCCCTGACAATGAACGACCTTTCCC...ATTTGACCTGAACCTATTTAAAGATCCCTTCTGCCCCTGAAGACCTATCCGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GCTTACTATTTGGACGGAACACCATTAAGATCAACCAGGATGCTCTCTGGGATTATGCAATTGGCTGCTTaGGTTCCACGAAACGTAATG +
Preference number: 5 (lower is better)
Translates to: AYYLDGTPLRSTRMLSGIMQLAA*VPRNVM
Trigger: CATTACGTTTCGTGGAACCAAAGCAGCCAATTGCAT...AATCCCAGAGAGCATCCTGGTTGATCTTAATGGTGTTCCGTCCAAATAGTAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp GTGCGGATAGGTCTTCAGGGGCAGAAGGGATCTTTAAATAGGTTCAGGTCAAATCATTCCATTCAAAGCTaGAACTCAGCAGGGAGTTTA +
Preference number: 5 (lower is better)
Translates to: VRIGLQGQKGSLNRFRSNHSIQS*NSAGSL
Trigger: TAAACTCCCTGCTGAGTTCAAGCTTTGAATGGAATG...ATTTGACCTGAACCTATTTAAAGATCCCTTCTGCCCCTGAAGACCTATCCGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp TTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTGGCAGGTGCTTACTATTaGGACGGAACACCATTAAGA +
Preference number: 5 (lower is better)
Translates to: FLSKKKVIPSSTKPFLLLAGAYY*DGTPLR
Trigger: TCTTAATGGTGTTCCGTCCAAATAGTAAGCACCTGC...CAGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCTTGGGTCACGTTCCTTaGGTTGCTCTGAGAACTCCT +
Preference number: 5 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSLGHVP*VALRTP
Trigger: AGGAGTTCTCAGAGCAACCAAAGGAACGTGACCCAA...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp TACTTTCTCATTCTCTTAGAGGATCTTATTGCCTCTTCCCGTACTGGAAATATTTGCAAAGCATCCAGGTaGTACAGCTGCAGCAGACAG +
Preference number: 5 (lower is better)
Translates to: YFLILLEDLIASSRTGNICKASR*YSCSRQ
Trigger: CTGTCTGCTGCAGCTGTACAACCTGGATGCTTTGCA...AATATTTCCAGTACGGGAAGAGGCAATAAGATCCTCTAAGAGAATGAGAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp CAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTCATGAGCCATCCTTCTaGGCAAAATTTCCTCCTAGC +
Preference number: 5 (lower is better)
Translates to: QEDLQTLEIYYIQQHGRPHEPSF*AKFPPS
Trigger: GCTAGGAGGAAATTTTGCCAAGAAGGATGGCTCATG...AGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GTGAGAACAAATCACTCACCACACACTCTTGGCTTTTCCCCAGTGAAGTCAATAGTTGGAGAGACCTGTTaGTTGGAGAATTGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: VRTNHSPHTLGFSPVKSIVGETC*LENWFS
Trigger: AGAAAACCAATTCTCCAACAAACAGGTCTCTCCAAC...TATTGACTTCACTGGGGAAAAGCCAAGAGTGTGTGGTGAGTGATTTGTTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp ACAATACAGGAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTGGTGTGCGGATATGCTaGTTCCGATATTCAGGGATC +
Preference number: 5 (lower is better)
Translates to: TIQEDLQTLEIYYIQQHGGVRIC*FRYSGI
Trigger: GATCCCTGAATATCGGAACAAGCATATCCGCACACC...ACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTCCTGTATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACACCGAATCTGAGCATTTaGCCTTCTATCTGGAGTGCC +
Preference number: 5 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTPNLSI*PSIWSA
Trigger: GGCACTCCAGATAGAAGGCAAAATGCTCAGATTCGG...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp AATTTCCTCCTAGCATTTGTAACTGACAAAACTTCCTTGATAGCTGTCAGTTCCTCAACAAAAAGCATGTaGGGCTGGCTCTTGTCCTTA +
Preference number: 5 (lower is better)
Translates to: NFLLAFVTDKTSLIAVSSSTKSM*GWLLSL
Trigger: TAAGGACAAGAGCCAGCCCAACATGCTTTTTGTTGA...GGAACTGACAGCTATCAAGGAAGTTTTGTCAGTTACAAATGCTAGGAGGAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCGGGAAAGGTCGTTCATaGTCAGGGAAAAATAAATGC +
Preference number: 5 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVGKGRS*SGKNKC
Trigger: GCATTTATTTTTCCCTGACAATGAACGACCTTTCCC...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACATTTTGCTAAACTCTTaGAGCTTAGGGTGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: EIYYIQQHGRPVRVLHIYILLNS*SLGWVR
Trigger: CCTCACCCACCCTAAGCTCAAAGAGTTTAGCAAAAT...GTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp ATTCTTGAGCAAGAAAAAGGTGATTCCTTCTTCCACAAAGCCATTCCTTCTCCTTCAGTAAACACAACTTaGGACTCGGATGTAAAGTTC +
Preference number: 5 (lower is better)
Translates to: ILEQEKGDSFFHKAIPSPSVNTT*DSDVKF
Trigger: GAACTTTACATCCGAGTCCAAAGTTGTGTTTACTGA...AGGAGAAGGAATGGCTTTGTGGAAGAAGGAATCACCTTTTTCTTGCTCAAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp CATATTTACATTAACTTAGATGTAGCAGTGCAAACCTTCACTCAACTGAGATCCTTCCATCTCCCAAATTaGCTGTCCATCTGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: HIYINLDVAVQTFTQLRSFHLPN*LSICGL
Trigger: AAGACCACAGATGGACAGCAAATTTGGGAGATGGAA...GGATCTCAGTTGAGTGAAGGTTTGCACTGCTACATCTAAGTTAATGTAAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GAAGACTTGCAAACTTTGGAAATATACTACATTCAGCAACACGGTAGACCTGTCATTAAATGCACATGCTaGAGATTCTCCACCGCTTTA +
Preference number: 5 (lower is better)
Translates to: EDLQTLEIYYIQQHGRPVIKCTC*RFSTAL
Trigger: TAAAGCGGTGGAGAATCTCAAGCATGTGCATTTAAT...GACAGGTCTACCGTGTTGCTGAATGTAGTATATTTCCAAAGTTTGCAAGTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp GAAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACCATTCCATTCAAAGCTaGAACTCAGCAGGGAGTTTA +
Preference number: 5 (lower is better)
Translates to: EIYYIQQHGRPVRVLHIYHSIQS*NSAGSL
Trigger: TAAACTCCCTGCTGAGTTCAAGCTTTGAATGGAATG...GTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp AAAGCATACAGGAGTTATCTACCAGGATTTAGATTTGGTCCCTTCTGTAAATATCTTTGCTGCGGATTATaGAGGAAACAACTGAATGGC +
Preference number: 5 (lower is better)
Translates to: KAYRSYLPGFRFGPFCKYLCCGL*RKQLNG
Trigger: GCCATTCAGTTGTTTCCTCAATAATCCGCAGCAAAG...ATATTTACAGAAGGGACCAAATCTAAATCCTGGTAGATAACTCCTGTATGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp AAAGCATACAGGAGTTATCTACCAGGATTTAGATTTGGTCCCTTCTGTAAATATATGCAATTGGCTGCTTaGGTTCCACGAAACGTAATG +
Preference number: 5 (lower is better)
Translates to: KAYRSYLPGFRFGPFCKYMQLAA*VPRNVM
Trigger: CATTACGTTTCGTGGAACCAAAGCAGCCAATTGCAT...ATATTTACAGAAGGGACCAAATCTAAATCCTGGTAGATAACTCCTGTATGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS-3UTR CAA 90 bp GCTATACATATTATCAAGCAGCAGCATCTTTGTACAATACAGGAAGACTTGCAATCAGTAAACACAACTTaGGACTCGGATGTAAAGTTC +
Preference number: 5 (lower is better)
Translates to: AIHIIKQQHLCTIQEDLQSVNTT*DSDVKF
Trigger: GAACTTTACATCCGAGTCCAAAGTTGTGTTTACTGA...TTGCAAGTCTTCCTGTATTGTACAAAGATGCTGCTGCTTGATAATATGTATAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000609943.5
CDS-3UTR CAA 90 bp AAATATACTACATTCAGCAACACGGTAGACCTGTCAGAGTGCTACATATTTACAGGAATCAATTCATCCTaGGTTATATCTATGCTGGAA +
Preference number: 5 (lower is better)
Translates to: KYTTFSNTVDLSECYIFTGINSS*VISMLE
Trigger: TTCCAGCATAGATATAACCAAGGATGAATTGATTCC...TGTAAATATGTAGCACTCTGACAGGTCTACCGTGTTGCTGAATGTAGTATATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371564.8
ENST00000396009.7
CDS GCA 72 bp GGGGACGCCGTCTTCTCTACCGCGTGCCCGCGGGGCTaGCCTGGCCGAGGAGCCTCGGAGCGACCCGGGAGC +
Preference number: 6 (lower is better)
Translates to: GDAVFSTACPRG*PGRGASERPGS
Trigger: GCTCCCGGGTCGCTCCGAGGCTCCTCGGCCAGGGCAGCCCCGCGGGCACGCGGTAGAGAAGACGGCGTCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609507.1
ENST00000609943.5
CDS CCA 72 bp CGCCGTCTTCTCTACCGCGTGCCCGCGGGGCTGCCCTaGCCGAGGAGCCTCGGAGCGACCCGGGAGCTGCGC +
Preference number: 6 (lower is better)
Translates to: RRLLYRVPAGLP*PRSLGATRELR
Trigger: GCGCAGCTCCCGGGTCGCTCCGAGGCTCCTCGGCCAGGGCAGCCCCGCGGGCACGCGGTAGAGAAGACGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609507.1
ENST00000609943.5
CDS CAA 90 bp CCGGGCGGCAGGGCAACCAAGGCCTCGGCGCACGAATGCCTCCGCTaGGCACCAGGCGATGAGGAGCGGGAGGCCGGACGGGGCACGGGC +
Preference number: 6 (lower is better)
Translates to: PGGRATKASAHECLR*APGDEEREAGRGTG
Trigger: GCCCGTGCCCCGTCCGGCCTCCCGCTCCTCATCGCCTGGTGCCAAGCGGAGGCATTCGTGCGCCGAGGCCTTGGTTGCCCTGCCGCCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp CCACGGCCGGGTAGATGTGGCGAGGCAGGCCGGCCTTaGATGGGGCGGCAGACACCGGCGAGGGGTCAGGGC +
Preference number: 6 (lower is better)
Translates to: PRPGRCGEAGRP*MGRQTPARGQG
Trigger: GCCCTGACCCCTCGCCGGTGTCTGCCGCCCCATCCAAGGCCGGCCTGCCTCGCCACATCTACCCGGCCGTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp GGCCGGGTAGATGTGGCGAGGCAGGCCGGCCTTGGATaGGGCGGCAGACACCGGCGAGGGGTCAGGGCTGGT +
Preference number: 6 (lower is better)
Translates to: GRVDVARQAGLG*GGRHRRGVRAG
Trigger: ACCAGCCCTGACCCCTCGCCGGTGTCTGCCGCCCCATCCAAGGCCGGCCTGCCTCGCCACATCTACCCGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS GCA 72 bp CCGGGCGGCAGGGCAACCAAGGCCTCGGCGCACGAATaGCTCCGCTTGGCACCAGGCGATGAGGAGCGGGAG +
Preference number: 6 (lower is better)
Translates to: PGGRATKASAHE*LRLAPGDEERE
Trigger: CTCCCGCTCCTCATCGCCTGGTGCCAAGCGGAGGCATTCGTGCGCCGAGGCCTTGGTTGCCCTGCCGCCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp GGGCAACCAAGGCCTCGGCGCACGAATGCCTCCGCTTaGCACCAGGCGATGAGGAGCGGGAGGCCGGACGGG +
Preference number: 6 (lower is better)
Translates to: GQPRPRRTNASA*HQAMRSGRPDG
Trigger: CCCGTCCGGCCTCCCGCTCCTCATCGCCTGGTGCCAAGCGGAGGCATTCGTGCGCCGAGGCCTTGGTTGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp CGGGCGTCAGGGGATGAGAGCCCCGTGCGGAACTGCTaGCAGGGAGCCATGGTGGCCACGAGGCAGGAGGGG +
Preference number: 6 (lower is better)
Translates to: RASGDESPVRNC*QGAMVATRQEG
Trigger: CCCCTCCTGCCTCGTGGCCACCATGGCTCCCTGCCAGCAGTTCCGCACGGGGCTCTCATCCCCTGACGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CAA 72 bp AGGGCAACCAAGGCCTCGGCGCACGAATGCCTCCGCTaGGCACCAGGCGATGAGGAGCGGGAGGCCGGACGG +
Preference number: 6 (lower is better)
Translates to: RATKASAHECLR*APGDEEREAGR
Trigger: CCGTCCGGCCTCCCGCTCCTCATCGCCTGGTGCCAAGCGGAGGCATTCGTGCGCCGAGGCCTTGGTTGCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS TCA 72 bp TGGGGTAGGAACCCGGGCTCAGCCTCTGACCTTGACTaGCCGGGGGCGGGCCAGGTCTGGTGGTGCCTGGTG +
Preference number: 6 (lower is better)
Translates to: WGRNPGSASDLD*PGAGQVWWCLV
Trigger: CACCAGGCACCACCAGACCTGGCCCGCCCCCGGTCAGTCAAGGTCAGAGGCTGAGCCCGGGTTCCTACCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CAA 72 bp GACTGTGGGGTAGGAACCCGGGCTCAGCCTCTGACCTaGACTGACCGGGGGCGGGCCAGGTCTGGTGGTGCC +
Preference number: 6 (lower is better)
Translates to: DCGVGTRAQPLT*TDRGRARSGGA
Trigger: GGCACCACCAGACCTGGCCCGCCCCCGGTCAGTCAAGGTCAGAGGCTGAGCCCGGGTTCCTACCCCACAGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS GCA 72 bp GAGGCCCCTGCTGGCTTGGCCGCGCTCAGAAACTTCTaGGGCCCTACCCTATCCGGCTCTCCGAATCGGCCG +
Preference number: 6 (lower is better)
Translates to: EAPAGLAALRNF*GPTLSGSPNRP
Trigger: CGGCCGATTCGGAGAGCCGGATAGGGTAGGGCCGCAGAAGTTTCTGAGCGCGGCCAAGCCAGCAGGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS GCA 72 bp AGTGATCTCGATCCGAGGGCTCAGGCCCGAGGCCCCTaGTGGCTTGGCCGCGCTCAGAAACTTCTGCGGCCC +
Preference number: 6 (lower is better)
Translates to: SDLDPRAQARGP*WLGRAQKLLRP
Trigger: GGGCCGCAGAAGTTTCTGAGCGCGGCCAAGCCAGCAGGGGCCTCGGGCCTGAGCCCTCGGATCGAGATCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS CCA 72 bp CGATCCGAGGGCTCAGGCCCGAGGCCCCTGCTGGCTTaGCCGCGCTCAGAAACTTCTGCGGCCCTACCCTAT +
Preference number: 6 (lower is better)
Translates to: RSEGSGPRPLLA*PRSETSAALPY
Trigger: ATAGGGTAGGGCCGCAGAAGTTTCTGAGCGCGGCCAAGCCAGCAGGGGCCTCGGGCCTGAGCCCTCGGATCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS CAA 72 bp TCGATCCGAGGGCTCAGGCCCGAGGCCCCTGCTGGCTaGGCCGCGCTCAGAAACTTCTGCGGCCCTACCCTA +
Preference number: 6 (lower is better)
Translates to: SIRGLRPEAPAG*AALRNFCGPTL
Trigger: TAGGGTAGGGCCGCAGAAGTTTCTGAGCGCGGCCAAGCCAGCAGGGGCCTCGGGCCTGAGCCCTCGGATCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS CAA 90 bp GGAGTGATCTCGATCCGAGGGCTCAGGCCCGAGGCCCCTGCTGGCTaGGCCGCGCTCAGAAACTTCTGCGGCCCTACCCTATCCGGCTCT +
Preference number: 6 (lower is better)
Translates to: GVISIRGLRPEAPAG*AALRNFCGPTLSGS
Trigger: AGAGCCGGATAGGGTAGGGCCGCAGAAGTTTCTGAGCGCGGCCAAGCCAGCAGGGGCCTCGGGCCTGAGCCCTCGGATCGAGATCACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS TCA 72 bp CGCTGGGTTCTGTTGCTGGTAGCGGGCGTCAGGGGATaGGAGCCCCGTGCGGAACTGCTGGCAGGGAGCCAT +
Preference number: 6 (lower is better)
Translates to: RWVLLLVAGVRG*EPRAELLAGSH
Trigger: ATGGCTCCCTGCCAGCAGTTCCGCACGGGGCTCTCATCCCCTGACGCCCGCTACCAGCAACAGAACCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp CTCATGCGGAGGGGCCCCACTGCCTGGATCAGTTCGTaGGACGGAGTGATCTCGATCCGAGGGCTCAGGCCC +
Preference number: 6 (lower is better)
Translates to: LMRRGPTAWISS*DGVISIRGLRP
Trigger: GGGCCTGAGCCCTCGGATCGAGATCACTCCGTCCCACGAACTGATCCAGGCAGTGGGGCCCCTCCGCATGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS CCA 72 bp GAAACTGCGGACACAGGTCGTCGGGCCCGCCGTTATTaGGCGAGACGCAGGGCGAGGTGTAGGGGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: ETADTGRRARRY*ARRRARCRGRR
Trigger: CCTTCTCCCCCTACACCTCGCCCTGCGTCTCGCCCAATAACGGCGGGCCCGACGACCTGTGTCCGCAGTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS CCA 72 bp GCGAGTGGCGGCCCAGGCAGCTGTCCTCGGCGAGGCTaGTTCGAGGTGACATTATTGGCGAGGTTCTGGGGG +
Preference number: 6 (lower is better)
Translates to: ASGGPGSCPRRG*FEVTLLARFWG
Trigger: CCCCCAGAACCTCGCCAATAATGTCACCTCGAACCAGCCTCGCCGAGGACAGCTGCCTGGGCCGCCACTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS CAA 90 bp CTGCTGAATGACTGTGGGGTAGGAACCCGGGCTCAGCCTCTGACCTaGACTGACCGGGGGCGGGCCAGGTCTGGTGGTGCCTGGTGCGAA +
Preference number: 6 (lower is better)
Translates to: LLNDCGVGTRAQPLT*TDRGRARSGGAWCE
Trigger: TTCGCACCAGGCACCACCAGACCTGGCCCGCCCCCGGTCAGTCAAGGTCAGAGGCTGAGCCCGGGTTCCTACCCCACAGTCATTCAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS GCA 72 bp CAGGAGGCCCGCGTCTCTCATGCGGAGGGGCCCCACTaGCTGGATCAGTTCGTGGGACGGAGTGATCTCGAT +
Preference number: 6 (lower is better)
Translates to: QEARVSHAEGPH*LDQFVGRSDLD
Trigger: ATCGAGATCACTCCGTCCCACGAACTGATCCAGGCAGTGGGGCCCCTCCGCATGAGAGACGCGGGCCTCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS CCA 72 bp AGGCCCGCGTCTCTCATGCGGAGGGGCCCCACTGCCTaGATCAGTTCGTGGGACGGAGTGATCTCGATCCGA +
Preference number: 6 (lower is better)
Translates to: RPASLMRRGPTA*ISSWDGVISIR
Trigger: TCGGATCGAGATCACTCCGTCCCACGAACTGATCCAGGCAGTGGGGCCCCTCCGCATGAGAGACGCGGGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS TCA 72 bp CTGGTGGCTTCCGCAGCGCAGCTGCTGGTTGGTGGGTaGGTAGTGGATCACAGGCGAGGCCTGCTGGTTGGT +
Preference number: 6 (lower is better)
Translates to: LVASAAQLLVGG*VVDHRRGLLVG
Trigger: ACCAACCAGCAGGCCTCGCCTGTGATCCACTACTCACCCACCAACCAGCAGCTGCGCTGCGGAAGCCACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS GCA 72 bp GCTGCTGATAGCCCAGCAGGCTGGGGCTCAGGCTCTTaGTCCGCTGGTAGAGTACGGCCGCTGGGTTCTGTT +
Preference number: 6 (lower is better)
Translates to: AADSPAGWGSGS*SAGRVRPLGSV
Trigger: AACAGAACCCAGCGGCCGTACTCTACCAGCGGAGCAAGAGCCTGAGCCCCAGCCTGCTGGGCTATCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS GCA 72 bp GGATGGCAGTGCCCCAGTCTGAACGCAGCCTCTCTCTaGATCTGGAGGGCACGGGGACTTGGCGCGTGTTTG +
Preference number: 6 (lower is better)
Translates to: GWQCPSLNAASL*IWRARGLGACL
Trigger: CAAACACGCGCCAAGTCCCCGTGCCCTCCAGATGCAGAGAGAGGCTGCGTTCAGACTGGGGCACTGCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609507.1
ENST00000609943.5
CDS CCA 72 bp CTTGGGCCAAGTGGGCGGAACCAGCAGGATGGATTCTaGAGCCGAGTTTCTCCTCTCGCCCTGCTCGCAGGG +
Preference number: 6 (lower is better)
Translates to: LGPSGRNQQDGF*SRVSPLALLAG
Trigger: CCCTGCGAGCAGGGCGAGAGGAGAAACTCGGCTCCAGAATCCATCCTGCTGGTTCCGCCCACTTGGCCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp CCAGCGGCTTGGGCCAAGTGGGCGGAACCAGCAGGATaGATTCTGGAGCCGAGTTTCTCCTCTCGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: PAAWAKWAEPAG*ILEPSFSSRPA
Trigger: AGCAGGGCGAGAGGAGAAACTCGGCTCCAGAATCCATCCTGCTGGTTCCGCCCACTTGGCCCAAGCCGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp ACTCCTGGTGGCTTCCGCAGCGCAGCTGCTGGTTGGTaGGTGAGTAGTGGATCACAGGCGAGGCCTGCTGGT +
Preference number: 6 (lower is better)
Translates to: TPGGFRSAAAGW*VSSGSQARPAG
Trigger: ACCAGCAGGCCTCGCCTGTGATCCACTACTCACCCACCAACCAGCAGCTGCGCTGCGGAAGCCACCAGGAGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp GGAACTCCTGGTGGCTTCCGCAGCGCAGCTGCTGGTTaGTGGGTGAGTAGTGGATCACAGGCGAGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: GTPGGFRSAAAG*WVSSGSQARPA
Trigger: AGCAGGCCTCGCCTGTGATCCACTACTCACCCACCAACCAGCAGCTGCGCTGCGGAAGCCACCAGGAGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp GCGAGTGGCGGCCCAGGCAGCTGTCCTCGGCGAGGCTaGTTCGAGGTGACATTATTGGCGAGGTTCTTGGTC +
Preference number: 6 (lower is better)
Translates to: ASGGPGSCPRRG*FEVTLLARFLV
Trigger: GACCAAGAACCTCGCCAATAATGTCACCTCGAACCAGCCTCGCCGAGGACAGCTGCCTGGGCCGCCACTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609507.1
CDS CAA 90 bp GCAGTCACTGGGATGCTGCAGATGGGAATGGCAGGCACCAGCGGCTaGGGCCAAGTGGGCGGAACCAGCAGGATGGATTCTGGAGCCGAG +
Preference number: 6 (lower is better)
Translates to: AVTGMLQMGMAGTSG*GQVGGTSRMDSGAE
Trigger: CTCGGCTCCAGAATCCATCCTGCTGGTTCCGCCCACTTGGCCCAAGCCGCTGGTGCCTGCCATTCCCATCTGCAGCATCCCAGTGACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS TCA 72 bp GCCCAGGCAGCTGTCCTCGGCGAGGCTGGTTCGAGGTaGCATTATTGGCGAGGTTCTTGGTCCACAGACCCC +
Preference number: 6 (lower is better)
Translates to: AQAAVLGEAGSR*HYWRGSWSTDP
Trigger: GGGGTCTGTGGACCAAGAACCTCGCCAATAATGTCACCTCGAACCAGCCTCGCCGAGGACAGCTGCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609507.1
CDS GCA 72 bp TGGCTTGAGGCCATAGTCCAGGACATCATCGGGGTATaGGGGTCCGGAGGGTGGGCTGGCGACCTTATGTGC +
Preference number: 6 (lower is better)
Translates to: WLEAIVQDIIGV*GSGGWAGDLMC
Trigger: GCACATAAGGTCGCCAGCCCACCCTCCGGACCCGCATACCCCGATGATGTCCTGGACTATGGCCTCAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS GCA 72 bp TGGTCCACAGACCCCATGATGCGGAGGGGATGGCAGTaGCCCAGTCTGAACGCAGCCTCTCTCTGCATCTGG +
Preference number: 6 (lower is better)
Translates to: WSTDPMMRRGWQ*PSLNAASLCIW
Trigger: CCAGATGCAGAGAGAGGCTGCGTTCAGACTGGGGCACTGCCATCCCCTCCGCATCATGGGGTCTGTGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609507.1
ENST00000609943.5
CDS CCA 72 bp AGATGGGAATGGCAGGCACCAGCGGCTTGGGCCAAGTaGGCGGAACCAGCAGGATGGATTCTGGAGCCGAGT +
Preference number: 6 (lower is better)
Translates to: RWEWQAPAAWAK*AEPAGWILEPS
Trigger: ACTCGGCTCCAGAATCCATCCTGCTGGTTCCGCCCACTTGGCCCAAGCCGCTGGTGCCTGCCATTCCCATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp GGATGCTGCAGATGGGAATGGCAGGCACCAGCGGCTTaGGCCAAGTGGGCGGAACCAGCAGGATGGATTCTG +
Preference number: 6 (lower is better)
Translates to: GCCRWEWQAPAA*AKWAEPAGWIL
Trigger: CAGAATCCATCCTGCTGGTTCCGCCCACTTGGCCCAAGCCGCTGGTGCCTGCCATTCCCATCTGCAGCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp GCACCTCGATCCGCAGCTCGTAAGAGCCTGACTGACTaGACAGCGGCCACTCAAGTGGAGGGAGGGATGCAG +
Preference number: 6 (lower is better)
Translates to: APRSAARKSLTD*TAATQVEGGMQ
Trigger: CTGCATCCCTCCCTCCACTTGAGTGGCCGCTGTCCAGTCAGTCAGGCTCTTACGAGCTGCGGATCGAGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp GCGAGTGGCGGCCCAGGCAGCTGTCCTCGGCGAGGCTaGTTCGAGGTGACATTATTGGCGAGGTTCTTCGTT +
Preference number: 6 (lower is better)
Translates to: ASGGPGSCPRRG*FEVTLLARFFV
Trigger: AACGAAGAACCTCGCCAATAATGTCACCTCGAACCAGCCTCGCCGAGGACAGCTGCCTGGGCCGCCACTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610033.5
CDS CCA 72 bp CAGTGCCCCAGTCTGAACGCAGCCTCTCTCTGCATCTaGAGGGCACGGGGACTTGGCGCGTGTTTGGAAAGG +
Preference number: 6 (lower is better)
Translates to: QCPSLNAASLCI*RARGLGACLER
Trigger: CCTTTCCAAACACGCGCCAAGTCCCCGTGCCCTCCAGATGCAGAGAGAGGCTGCGTTCAGACTGGGGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609507.1
ENST00000609943.5
CDS CAA 72 bp GGGATGCTGCAGATGGGAATGGCAGGCACCAGCGGCTaGGGCCAAGTGGGCGGAACCAGCAGGATGGATTCT +
Preference number: 6 (lower is better)
Translates to: GMLQMGMAGTSG*GQVGGTSRMDS
Trigger: AGAATCCATCCTGCTGGTTCCGCCCACTTGGCCCAAGCCGCTGGTGCCTGCCATTCCCATCTGCAGCATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS TCA 72 bp GCCCAGGCAGCTGTCCTCGGCGAGGCTGGTTCGAGGTaGCATTATTGGCGAGGTTCTGGGGGAATAATGAGC +
Preference number: 6 (lower is better)
Translates to: AQAAVLGEAGSR*HYWRGSGGIMS
Trigger: GCTCATTATTCCCCCAGAACCTCGCCAATAATGTCACCTCGAACCAGCCTCGCCGAGGACAGCTGCCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS GCA 72 bp GTGGTGCCTGGTGCGAAATTCTCGCAGTACATGATGTaGTGGAACTCCTGGTGGCTTCCGCAGCGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: VVPGAKFSQYMM*WNSWWLPQRSC
Trigger: GCAGCTGCGCTGCGGAAGCCACCAGGAGTTCCAGCACATCATGTACTGCGAGAATTTCGCACCAGGCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp GTGCCTGGTGCGAAATTCTCGCAGTACATGATGTGCTaGAACTCCTGGTGGCTTCCGCAGCGCAGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: VPGAKFSQYMMC*NSWWLPQRSCW
Trigger: CCAGCAGCTGCGCTGCGGAAGCCACCAGGAGTTCCAGCACATCATGTACTGCGAGAATTTCGCACCAGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp TTGACTGACCGGGGGCGGGCCAGGTCTGGTGGTGCCTaGTGCGAAATTCTCGCAGTACATGATGTGCTGGAA +
Preference number: 6 (lower is better)
Translates to: LTDRGRARSGGA*CEILAVHDVLE
Trigger: TTCCAGCACATCATGTACTGCGAGAATTTCGCACCAGGCACCACCAGACCTGGCCCGCCCCCGGTCAGTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp CGCAGCCTCTCTCTGCATCTGGAGGGCACGGGGACTTaGCGCGTGTTTGGAAAGGGGGATCTGTTTGTATCG +
Preference number: 6 (lower is better)
Translates to: RSLSLHLEGTGT*RVFGKGDLFVS
Trigger: CGATACAAACAGATCCCCCTTTCCAAACACGCGCCAAGTCCCCGTGCCCTCCAGATGCAGAGAGAGGCTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609507.1
ENST00000609943.5
CDS CAA 72 bp CTCTGCATCTGGAGGGCACGGGGACTTGGCGCGTGTTaGGAAAGGGGGATCTGTTTGTATCGACCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: LCIWRARGLGAC*ERGICLYRPAA
Trigger: GGCTGCTGGTCGATACAAACAGATCCCCCTTTCCAAACACGCGCCAAGTCCCCGTGCCCTCCAGATGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609507.1
ENST00000609943.5
CDS TCA 72 bp GTCTGGTGGTGCCTGGTGCGAAATTCTCGCAGTACATaGTGTGCTGGAACTCCTGGTGGCTTCCGCAGCGCA +
Preference number: 6 (lower is better)
Translates to: VWWCLVRNSRST*CAGTPGGFRSA
Trigger: TGCGCTGCGGAAGCCACCAGGAGTTCCAGCACATCATGTACTGCGAGAATTTCGCACCAGGCACCACCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp GCGAAATTCTCGCAGTACATGATGTGCTGGAACTCCTaGTGGCTTCCGCAGCGCAGCTGCTGGTTGGTGGGT +
Preference number: 6 (lower is better)
Translates to: AKFSQYMMCWNS*WLPQRSCWLVG
Trigger: ACCCACCAACCAGCAGCTGCGCTGCGGAAGCCACCAGGAGTTCCAGCACATCATGTACTGCGAGAATTTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CAA 72 bp TTGGTCACTGACCGGGGGTCCGTTTTTGGCGGCTCTTaGGCTCGTGGCATTCTGCTGCTGAATGACTGTGGG +
Preference number: 6 (lower is better)
Translates to: LVTDRGSVFGGS*ARGILLLNDCG
Trigger: CCCACAGTCATTCAGCAGCAGAATGCCACGAGCCAAAGAGCCGCCAAAAACGGACCCCCGGTCAGTGACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CAA 90 bp GAGGATCATTTGCTGGCCGCCATAGACCAGGCAGCTGTCTGTGTCTaGTCTTTCAACCATGGGCAGCTCGTGAGCAGATCGCTGGGAGCA +
Preference number: 6 (lower is better)
Translates to: EDHLLAAIDQAAVCV*SFNHGQLVSRSLGA
Trigger: TGCTCCCAGCGATCTGCTCACGAGCTGCCCATGGTTGAAAGACAAGACACAGACAGCTGCCTGGTCTATGGCGGCCAGCAAATGATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS TCA 72 bp GCCCAGGCAGCTGTCCTCGGCGAGGCTGGTTCGAGGTaGCATTATTGGCGAGGTTCTTCGTTCGGATTCAAA +
Preference number: 6 (lower is better)
Translates to: AQAAVLGEAGSR*HYWRGSSFGFK
Trigger: TTTGAATCCGAACGAAGAACCTCGCCAATAATGTCACCTCGAACCAGCCTCGCCGAGGACAGCTGCCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610033.5
CDS CCA 72 bp AGACCAGGCAGCTGTCTGTGTCTTGTCTTTCAACCATaGGCAGCTCGTGAGCAGATCGCTGGGAGCACTCGA +
Preference number: 6 (lower is better)
Translates to: RPGSCLCLVFQP*AAREQIAGSTR
Trigger: TCGAGTGCTCCCAGCGATCTGCTCACGAGCTGCCCATGGTTGAAAGACAAGACACAGACAGCTGCCTGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp AAATTCTCGCAGTACATGATGTGCTGGAACTCCTGGTaGCTTCCGCAGCGCAGCTGCTGGTTGGTGGGTGAG +
Preference number: 6 (lower is better)
Translates to: KFSQYMMCWNSW*LPQRSCWLVGE
Trigger: CTCACCCACCAACCAGCAGCTGCGCTGCGGAAGCCACCAGGAGTTCCAGCACATCATGTACTGCGAGAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CAA 72 bp GGACTCGGATGTAAAGTTCTGCCCCGTGAGGATCATTaGCTGGCCGCCATAGACCAGGCAGCTGTCTGTGTC +
Preference number: 6 (lower is better)
Translates to: GLGCKVLPREDH*LAAIDQAAVCV
Trigger: GACACAGACAGCTGCCTGGTCTATGGCGGCCAGCAAATGATCCTCACGGGGCAGAACTTTACATCCGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CAA 90 bp GGCCCAGGCAGCTGTCCTCGGCGAGGCTGGTTCGAGGTGACATTATaGGCGAGGTTCTGGGGGAATAATGAGCAGGGATGTTTTGAAACT +
Preference number: 6 (lower is better)
Translates to: GPGSCPRRGWFEVTL*ARFWGNNEQGCFET
Trigger: AGTTTCAAAACATCCCTGCTCATTATTCCCCCAGAACCTCGCCAATAATGTCACCTCGAACCAGCCTCGCCGAGGACAGCTGCCTGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609943.5
CDS TCA 72 bp CTGTCTGTGTCTTGTCTTTCAACCATGGGCAGCTCGTaGGCAGATCGCTGGGAGCACTCGATGGGGTTAGAT +
Preference number: 6 (lower is better)
Translates to: LSVSCLSTMGSS*ADRWEHSMGLD
Trigger: ATCTAACCCCATCGAGTGCTCCCAGCGATCTGCTCACGAGCTGCCCATGGTTGAAAGACAAGACACAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp TCCCCGCACAGTCGATGGTTGCCCTCATGTTGTTTTTaGGCTCCAAGGGTATCTCCAGGACTTTGGTGTTGC +
Preference number: 6 (lower is better)
Translates to: SPHSRWLPSCCF*APRVSPGLWCC
Trigger: GCAACACCAAAGTCCTGGAGATACCCTTGGAGCCCAAAAACAACATGAGGGCAACCATCGACTGTGCGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp CTTCGTTCGGATTCAAATACTCATAGTCGAAGAGGATaGAGAAGTCAAGCTCGTCTTGGGGGCTGCCCCCAG +
Preference number: 6 (lower is better)
Translates to: LRSDSNTHSRRG*RSQARLGGCPQ
Trigger: CTGGGGGCAGCCCCCAAGACGAGCTTGACTTCTCCATCCTCTTCGACTATGAGTATTTGAATCCGAACGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000610033.5
CDS CAA 72 bp ATCCCCGCACAGTCGATGGTTGCCCTCATGTTGTTTTaGGGCTCCAAGGGTATCTCCAGGACTTTGGTGTTG +
Preference number: 6 (lower is better)
Translates to: IPAQSMVALMLF*GSKGISRTLVL
Trigger: CAACACCAAAGTCCTGGAGATACCCTTGGAGCCCAAAAACAACATGAGGGCAACCATCGACTGTGCGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CAA 90 bp CACAACTTTGGACTCGGATGTAAAGTTCTGCCCCGTGAGGATCATTaGCTGGCCGCCATAGACCAGGCAGCTGTCTGTGTCTTGTCTTTC +
Preference number: 6 (lower is better)
Translates to: HNFGLGCKVLPREDH*LAAIDQAAVCVLSF
Trigger: GAAAGACAAGACACAGACAGCTGCCTGGTCTATGGCGGCCAGCAAATGATCCTCACGGGGCAGAACTTTACATCCGAGTCCAAAGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CCA 72 bp AAAGCATGTTGGGCTGGCTCTTGTCCTTATCCACCGTaGCTTCCATCTCCCAAATTTGCTGTCCATCTGTGG +
Preference number: 6 (lower is better)
Translates to: KACWAGSCPYPP*LPSPKFAVHLW
Trigger: CCACAGATGGACAGCAAATTTGGGAGATGGAAGCCACGGTGGATAAGGACAAGAGCCAGCCCAACATGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS CAA 72 bp TTCAAGATCCCCGCACAGTCGATGGTTGCCCTCATGTaGTTTTTGGGCTCCAAGGGTATCTCCAGGACTTTG +
Preference number: 6 (lower is better)
Translates to: FKIPAQSMVALM*FLGSKGISRTL
Trigger: CAAAGTCCTGGAGATACCCTTGGAGCCCAAAAACAACATGAGGGCAACCATCGACTGTGCGGGGATCTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS TCA 72 bp TGTAAAGAGACGATTCTGCCACTGGACTCTGGGATGTaGACTCGGAAAACCAGTCTCACCCGCGTGTTCTTT +
Preference number: 6 (lower is better)
Translates to: CKETILPLDSGM*TRKTSLTRVFF
Trigger: AAAGAACACGCGGGTGAGACTGGTTTTCCGAGTTCACATCCCAGAGTCCAGTGGCAGAATCGTCTCTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS GCA 72 bp GGTAATAATCATGGAGATGAGGGACTCTGTGCAAAGTaGATTACATTATGTGGGGTGTGGGATCAGGGGAGC +
Preference number: 6 (lower is better)
Translates to: GNNHGDEGLCAK*ITLCGVWDQGS
Trigger: GCTCCCCTGATCCCACACCCCACATAATGTAATGCACTTTGCACAGAGTCCCTCATCTCCATGATTATTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496054.1
CDS CAA 90 bp TCCCAAATTTGCTGTCCATCTGTGGTCTTCTCAGTAAACACAACTTaGGACTCGGATGTAAAGTTCTGCCCCGTGAGGATCATTTGCTGG +
Preference number: 6 (lower is better)
Translates to: SQICCPSVVFSVNTT*DSDVKFCPVRIICW
Trigger: CCAGCAAATGATCCTCACGGGGCAGAACTTTACATCCGAGTCCAAAGTTGTGTTTACTGAGAAGACCACAGATGGACAGCAAATTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371564.8
ENST00000396009.7
ENST00000414705.5
ENST00000609507.1
ENST00000609943.5
ENST00000610033.5
CDS GCA 72 bp AAAATCACCTTTGATCTCTCTTACGCTTCCAACTCATaGCGATATCATCCAAGCCCAGGAGGGAACTTAACC +
Preference number: 6 (lower is better)
Translates to: KITFDLSYASNS*RYHPSPGGNLT
Trigger: GGTTAAGTTCCCTCCTGGGCTTGGATGATATCGGCATGAGTTGGAAGCGTAAGAGAGATCAAAGGTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496054.1
CDS CCA 72 bp CTGTTATCTTCCTTCAGGCATCTACAGATACTAAACTaGGCCCCAGTTTCCTTCTTACTAGTGATATCACCT +
Preference number: 6 (lower is better)
Translates to: LLSSFRHLQILN*APVSFLLVISP
Trigger: AGGTGATATCACTAGTAAGAAGGAAACTGGGGCCCAGTTTAGTATCTGTAGATGCCTGAAGGAAGATAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496054.1
CDS TCA 72 bp TGGCTTCTTTTACGTCTGATTTCTGGCAGGAGGTCCTaGAAACTCCTTCCTGATAATTTCATTAACATCATC +
Preference number: 6 (lower is better)
Translates to: WLLLRLISGRRS*KLLPDNFINII
Trigger: GATGATGTTAATGAAATTATCAGGAAGGAGTTTTCAGGACCTCCTGCCAGAAATCAGACGTAAAAGAAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396009.7
ENST00000609943.5