RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NFATC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000131196

Ensembl transcript IDs: ENST00000253506.9, ENST00000318065.9, ENST00000329101.8, ENST00000397790.6, ENST00000427363.7, ENST00000542384.5, ENST00000545796.5, ENST00000586434.1, ENST00000586695.1, ENST00000587635.5, ENST00000590172.1, ENST00000590224.5, ENST00000590313.5, ENST00000590861.1, ENST00000591065.1, ENST00000591089.1, ENST00000591814.5, ENST00000592223.5

Found 1962 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCCGGCAGTCGGAGACTCGTCCCTGCGGACCGTGGACGGCAGGTaGTGCGGGCGGCCCGTGGCGGGCGGGCACGCTGGGCTGCAGGGC +
Preference number: 1 (lower is better)
Translates to: GPAVGDSSLRTVDGR*CGRPVAGGHAGLQG
Trigger: GCCCTGCAGCCCAGCGTGCCCGCCCGCCACGGGCCGCCCGCAGCACCTGCCGTCCACGGTCCGCAGGGACGAGTCTCCGACTGCCGGGCC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR CCA 90 bp GCAGCAGCCGTGGCCCGGCAGTCGGAGACTCGTCCCTGCGGACCGTaGACGGCAGGTGCTGCGGGCGGCCCGTGGCGGGCGGGCACGCTG +
Preference number: 1 (lower is better)
Translates to: AAAVARQSETRPCGP*TAGAAGGPWRAGTL
Trigger: CAGCGTGCCCGCCCGCCACGGGCCGCCCGCAGCACCTGCCGTCCACGGTCCGCAGGGACGAGTCTCCGACTGCCGGGCCACGGCTGCTGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR GCA 90 bp GGTCGTGGAGCTTGGGGCTCACGCCAGGGGCCGCTGGCATCAGGGTaGTTCTCTGCGGACAGGGCGGGAAGCCGGCCACGAGGCAGGAGC +
Preference number: 1 (lower is better)
Translates to: GRGAWGSRQGPLASG*FSADRAGSRPRGRS
Trigger: GCTCCTGCCTCGTGGCCGGCTTCCCGCCCTGTCCGCAGAGAAGCACCCTGATGCCAGCGGCCCCTGGCGTGAGCCCCAAGCTCCACGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR CCA 90 bp AGCGGGAGAAAGGTCGTGGAGCTTGGGGCTCACGCCAGGGGCCGCTaGCATCAGGGTGCTTCTCTGCGGACAGGGCGGGAAGCCGGCCAC +
Preference number: 1 (lower is better)
Translates to: SGRKVVELGAHARGR*HQGASLRTGREAGH
Trigger: GTGGCCGGCTTCCCGCCCTGTCCGCAGAGAAGCACCCTGATGCCAGCGGCCCCTGGCGTGAGCCCCAAGCTCCACGACCTTTCTCCCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR CCA 90 bp CCTCTCCGGCCGGCTGCGGGAGTCCGAGGTGACAGTGGCCCGGGCTaGCAACGCCCTTGGTGTAGGCAGCGGGAGAAAGGTCGTGGAGCT +
Preference number: 1 (lower is better)
Translates to: PLRPAAGVRGDSGPG*QRPWCRQREKGRGA
Trigger: AGCTCCACGACCTTTCTCCCGCTGCCTACACCAAGGGCGTTGCCAGCCCGGGCCACTGTCACCTCGGACTCCCGCAGCCGGCCGGAGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR TCA 90 bp CAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATaGAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAGCCCGGCCAC +
Preference number: 1 (lower is better)
Translates to: QKGWAWGQTACGPFP*KAPARWVSRAQPGH
Trigger: GTGGCCGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 90 bp GTGTGGACTGGAGGTAGCAGGAGCGGCTCAGCCCCACCGGCTTCATaGTGTGGCCACGGTCCTGGGGGCCGCCACCTCCCACCTGTGAAG +
Preference number: 1 (lower is better)
Translates to: VWTGGSRSGSAPPAS*CGHGPGGRHLPPVK
Trigger: CTTCACAGGTGGGAGGTGGCGGCCCCCAGGACCGTGGCCACAGCATGAAGCCGGTGGGGCTGAGCCGCTCCTGCTACCTCCAGTCCACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR CCA 90 bp GCTGCGGGAGTCCGAGGTGACAGTGGCCCGGGCTGGCAACGCCCTTaGTGTAGGCAGCGGGAGAAAGGTCGTGGAGCTTGGGGCTCACGC +
Preference number: 1 (lower is better)
Translates to: AAGVRGDSGPGWQRP*CRQREKGRGAWGSR
Trigger: GCGTGAGCCCCAAGCTCCACGACCTTTCTCCCGCTGCCTACACCAAGGGCGTTGCCAGCCCGGGCCACTGTCACCTCGGACTCCCGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR CCA 90 bp GGAGTGTGGCTGGTAGGACAGGACGGCCGGCTGCCAGGTGGGGTGTaGACTGGAGGTAGCAGGAGCGGCTCAGCCCCACCGGCTTCATGC +
Preference number: 1 (lower is better)
Translates to: GVWLVGQDGRLPGGV*TGGSRSGSAPPASC
Trigger: GCATGAAGCCGGTGGGGCTGAGCCGCTCCTGCTACCTCCAGTCCACACCCCACCTGGCAGCCGGCCGTCCTGTCCTACCAGCCACACTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR GCA 90 bp GGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTaGACGGTGGGTCTCCCGTGCTCAGCCCGGCCACCTCCCTTCTGT +
Preference number: 1 (lower is better)
Translates to: GVGSNCVWAVPMKGP*TVGLPCSARPPPFC
Trigger: ACAGAAGGGAGGTGGCCGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CCA 90 bp GCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTaGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGG +
Preference number: 1 (lower is better)
Translates to: ARDSYSAGCRVPSRR*DAATRLHGYVQTDG
Trigger: CCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CCA 90 bp TGCTTCTCTGCGGACAGGGCGGGAAGCCGGCCACGAGGCAGGAGCTaGGGTCGGGTGGCATCGCGAGCTGCTGGCTGTAGTATGGTCTTG +
Preference number: 1 (lower is better)
Translates to: CFSADRAGSRPRGRS*GRVASRAAGCSMVL
Trigger: CAAGACCATACTACAGCCAGCAGCTCGCGATGCCACCCGACCCCAGCTCCTGCCTCGTGGCCGGCTTCCCGCCCTGTCCGCAGAGAAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR CCA 90 bp TGGCAACGCCCTTGGTGTAGGCAGCGGGAGAAAGGTCGTGGAGCTTaGGGCTCACGCCAGGGGCCGCTGGCATCAGGGTGCTTCTCTGCG +
Preference number: 1 (lower is better)
Translates to: WQRPWCRQREKGRGA*GSRQGPLASGCFSA
Trigger: CGCAGAGAAGCACCCTGATGCCAGCGGCCCCTGGCGTGAGCCCCAAGCTCCACGACCTTTCTCCCGCTGCCTACACCAAGGGCGTTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR CCA 90 bp GGCCAAATTAGGACTACCGTCCTCATGCACCTCTGGCAGCAGCCGTaGCCCGGCAGTCGGAGACTCGTCCCTGCGGACCGTGGACGGCAG +
Preference number: 1 (lower is better)
Translates to: GQIRTTVLMHLWQQP*PGSRRLVPADRGRQ
Trigger: CTGCCGTCCACGGTCCGCAGGGACGAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGACGGTAGTCCTAATTTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR GCA 90 bp GACAGTCCCCTGAGAAAGGCTGCACGTGACTCCTACAGTGCCGGGTaGAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGTCTTCAC +
Preference number: 1 (lower is better)
Translates to: DSPLRKAARDSYSAG*RVPSRRWDAATRLH
Trigger: GTGAAGACGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGCCTTTCTCAGGGGACTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CCA 90 bp GCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTaGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTG +
Preference number: 1 (lower is better)
Translates to: ARPSEAAMDASKSSD*SPRRRFQNGCRLLL
Trigger: CAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR TCA 90 bp ACGGAGGCAAAGAGAGGGAGAACGGGCGAAGGCTGGTGCCCAGGGTaGGCCTGGGGAACCTGGCCTGCGTTGAGCCATGCTGGAGCAGAT +
Preference number: 1 (lower is better)
Translates to: TEAKRGRTGEGWCPG*AWGTWPALSHAGAD
Trigger: ATCTGCTCCAGCATGGCTCAACGCAGGCCAGGTTCCCCAGGCTCACCCTGGGCACCAGCCTTCGCCCGTTCTCCCTCTCTTTGCCTCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR GCA 90 bp GTGTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTaGTCAGCCCGGCCACCTCCCTTCTGTTGTCATGAGATGACTTCT +
Preference number: 1 (lower is better)
Translates to: VWAVPMKGPCTVGLP*SARPPPFCCHEMTS
Trigger: AGAAGTCATCTCATGACAACAGAAGGGAGGTGGCCGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 90 bp TCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATaGACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGA +
Preference number: 1 (lower is better)
Translates to: SWLSRVLLELRETRK*TAVRGGDGRQQEQR
Trigger: TCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CCA 90 bp TACAGGAATAGGGGCCAAATTAGGACTACCGTCCTCATGCACCTCTaGCAGCAGCCGTGGCCCGGCAGTCGGAGACTCGTCCCTGCGGAC +
Preference number: 1 (lower is better)
Translates to: YRNRGQIRTTVLMHL*QQPWPGSRRLVPAD
Trigger: GTCCGCAGGGACGAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGACGGTAGTCCTAATTTGGCCCCTATTCCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR GCA 90 bp AGCAAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATaGCGGTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGT +
Preference number: 1 (lower is better)
Translates to: SKSSDWSPRRRFQNG*RLLLTGKPSWARTR
Trigger: ACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR TCA 90 bp CGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTaGGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCC +
Preference number: 1 (lower is better)
Translates to: RADRRDGLQVVSFRE*DTRDAIVPERTVQA
Trigger: GGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 90 bp TTGACCGTTACAGGAATAGGGGCCAAATTAGGACTACCGTCCTCATaGACCTCTGGCAGCAGCCGTGGCCCGGCAGTCGGAGACTCGTCC +
Preference number: 1 (lower is better)
Translates to: LTVTGIGAKLGLPSS*TSGSSRGPAVGDSS
Trigger: GGACGAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGACGGTAGTCCTAATTTGGCCCCTATTCCTGTAACGGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR TCA 90 bp ACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTaGCAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATT +
Preference number: 1 (lower is better)
Translates to: TGAPDAGSKTDAGYC*QGSPPGRGHVGSVI
Trigger: AATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR TCA 90 bp TTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTaGCTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAG +
Preference number: 1 (lower is better)
Translates to: FLLREPFLHQRRSVQ*LHSRSLHPQVQFRQ
Trigger: CTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 90 bp CTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTaGGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGAC +
Preference number: 1 (lower is better)
Translates to: LLSITAPGFLGSSSN*VRRENARPSEAAMD
Trigger: GTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 90 bp AAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTaGGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTC +
Preference number: 1 (lower is better)
Translates to: KRRDCAGAHGTGRSF*GSPFSISDVLFSDF
Trigger: GAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR TCA 90 bp GTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTaGGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACA +
Preference number: 1 (lower is better)
Translates to: VTCRPTGWPSGCFFP*VRHKRRDCAGAHGT
Trigger: TGTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 90 bp TTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTaGCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTT +
Preference number: 1 (lower is better)
Translates to: FRLFLSVSETQETRL*RSARYRPFLLREPF
Trigger: AAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 90 bp GACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTaGAATTCAGGCAGGTTCCATAAGGGGGCATTAATTCCTAAGGCA +
Preference number: 1 (lower is better)
Translates to: DVLFSDFTAGASTRR*NSGRFHKGALIPKA
Trigger: TGCCTTAGGAATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CCA 90 bp GTAGAAACTGACGTGAACGGGGCTGGTTATCCTCTGATTCCGAAATaGCGGGATCTCAACCACCAGAGAATTCGGCTTGCACAGGTCCCG +
Preference number: 1 (lower is better)
Translates to: VETDVNGAGYPLIPK*RDLNHQRIRLAQVP
Trigger: CGGGACCTGTGCAAGCCGAATTCTCTGGTGGTTGAGATCCCGCCATTTCGGAATCAGAGGATAACCAGCCCCGTTCACGTCAGTTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR TCA 90 bp CAGCTGACACAGACATCAAACGTTTCCTTTTCAATGACAGTCCCCTaGGAAAGGCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTAC +
Preference number: 1 (lower is better)
Translates to: QLTQTSNVSFSMTVP*ERLHVTPTVPGAGY
Trigger: GTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGCCTTTCTCAGGGGACTGTCATTGAAAAGGAAACGTTTGATGTCTGTGTCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR TCA 90 bp TATTTATTCAAAAGTCTTTGTCTGCTGAAGTCAGCATACCCCTGCTaGACTGAGTGCTCCAATGTGGCAACTAGGAGTGGGTGCTCGTGC +
Preference number: 1 (lower is better)
Translates to: YLFKSLCLLKSAYPC*TECSNVATRSGCSC
Trigger: GCACGAGCACCCACTCCTAGTTGCCACATTGGAGCACTCAGTTCAGCAGGGGTATGCTGACTTCAGCAGACAAAGACTTTTGAATAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
ENST00000590313.5
3UTR CCA 90 bp AGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTaGGCGAGGACACGTCGGCTCTGTTATTATTTATACATAAATAGA +
Preference number: 1 (lower is better)
Translates to: RFQNGCRLLLTGKPS*ARTRRLCYYLYINR
Trigger: TCTATTTATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR TCA 90 bp CTGGAAGATTCTAAAATGCACTGTGTAAGGCAGCAGGAGTGTACGTaGCAGCCCAGGAAACGTTCCAAATGTTGGAGACTCATACTAGAG +
Preference number: 1 (lower is better)
Translates to: LEDSKMHCVRQQECT*QPRKRSKCWRLILE
Trigger: CTCTAGTATGAGTCTCCAACATTTGGAACGTTTCCTGGGCTGTCACGTACACTCCTGCTGCCTTACACAGTGCATTTTAGAATCTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 90 bp ACTTGTGCTATGTTCGAAGCCAGATTAAAAACAAAGATGCGAGCATaGGACTATGAACAAGCCTACGGTTTCAACCGCGCAGACAAGGGA +
Preference number: 1 (lower is better)
Translates to: TCAMFEARLKTKMRA*DYEQAYGFNRADKG
Trigger: TCCCTTGTCTGCGCGGTTGAAACCGTAGGCTTGTTCATAGTCGCATGCTCGCATCTTTGTTTTTAATCTGGCTTCGAACATAGCACAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR TCA 90 bp TACGGTTTCAACCGCGCAGACAAGGGAAGCATGTTACAAAAGAGCTaGGATGACAGACTGGAAGATTCTAAAATGCACTGTGTAAGGCAG +
Preference number: 1 (lower is better)
Translates to: YGFNRADKGSMLQKS*DDRLEDSKMHCVRQ
Trigger: CTGCCTTACACAGTGCATTTTAGAATCTTCCAGTCTGTCATCTCAGCTCTTTTGTAACATGCTTCCCTTGTCTGCGCGGTTGAAACCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR TCA 90 bp TATGTTCGAAGCCAGATTAAAAACAAAGATGCGAGCATGCGACTATaGACAAGCCTACGGTTTCAACCGCGCAGACAAGGGAAGCATGTT +
Preference number: 1 (lower is better)
Translates to: YVRSQIKNKDASMRL*TSLRFQPRRQGKHV
Trigger: AACATGCTTCCCTTGTCTGCGCGGTTGAAACCGTAGGCTTGTTCATAGTCGCATGCTCGCATCTTTGTTTTTAATCTGGCTTCGAACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CCA 90 bp TACAGTAGCAAATTCAATGCTCAATTCTATGATGCCCTGATGGTCTaGTTAAATAAGGCACTTCCAGTATTGAACCCCAGGGGTGCCAGA +
Preference number: 1 (lower is better)
Translates to: YSSKFNAQFYDALMV*LNKALPVLNPRGAR
Trigger: TCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATTGAATTTGCTACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 90 bp GCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTATTTaGCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGG +
Preference number: 1 (lower is better)
Translates to: AKFIPKGACKIAIPI*LFTVSSFRVQMHTR
Trigger: CCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
3UTR TCA 90 bp CCTTCCAGCGTTCTCTTCATTCATACAGAGGGTAAAACCTCACAATaGAATGTGTTTGCAGTTTCTGCTCCTAAAAATACTCCTACAGTA +
Preference number: 1 (lower is better)
Translates to: PSSVLFIHTEGKTSQ*NVFAVSAPKNTPTV
Trigger: TACTGTAGGAGTATTTTTAGGAGCAGAAACTGCAAACACATTTCATTGTGAGGTTTTACCCTCTGTATGAATGAAGAGAACGCTGGAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 90 bp CTGCTTTTGTCCAGTAACCTATTGATGTGCTATTCAAGTTACTTGTaGTATGTTCGAAGCCAGATTAAAAACAAAGATGCGAGCATGCGA +
Preference number: 1 (lower is better)
Translates to: LLLSSNLLMCYSSYL*YVRSQIKNKDASMR
Trigger: TCGCATGCTCGCATCTTTGTTTTTAATCTGGCTTCGAACATAGCACAAGTAACTTGAATAGCACATCAATAGGTTACTGGACAAAAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR TCA 90 bp AGGCTATCCTGTAACAGGTTTTTCTGCTTTTGTCCAGTAACCTATTaGTGTGCTATTCAAGTTACTTGTGCTATGTTCGAAGCCAGATTA +
Preference number: 1 (lower is better)
Translates to: RLSCNRFFCFCPVTY*CAIQVTCAMFEARL
Trigger: TAATCTGGCTTCGAACATAGCACAAGTAACTTGAATAGCACATCAATAGGTTACTGGACAAAAGCAGAAAAACCTGTTACAGGATAGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp GGCCCGGCAGTCGGAGACTCGTCCCTGCGGACCGTGGACGGCAGGTGCTGCGGGACAGCGTGCGGCCGCTaGGTTGCGGGACGTGAACGC +
Preference number: 2 (lower is better)
Translates to: GPAVGDSSLRTVDGRCCGTACGR*VAGRER
Trigger: GCGTTCACGTCCCGCAACCCAGCGGCCGCACGCTGT...CCCGCAGCACCTGCCGTCCACGGTCCGCAGGGACGAGTCTCCGACTGCCGGGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp GGCCCGGCAGTCGGAGACTCGTCCCTGCGGACCGTGGACGGCAGGTGCTGCGGGCACGCCAGGGGCCGCTaGCATCAGGGTGCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: GPAVGDSSLRTVDGRCCGHARGR*HQGASL
Trigger: CAGAGAAGCACCCTGATGCCAGCGGCCCCTGGCGTG...CCCGCAGCACCTGCCGTCCACGGTCCGCAGGGACGAGTCTCCGACTGCCGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR TCA 90 bp GGGGTGCGTGGCCACTGGCCTGGGCACGTCCTGGACGGCGGGGGCCTCTCCGGCTGGCGGGAAGGTAGGTaGAACGCTGGTACTGGCTTC +
Preference number: 2 (lower is better)
Translates to: GVRGHWPGHVLDGGGLSGWREGR*NAGTGF
Trigger: GAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCA...GCCGGAGAGGCCCCCGCCGTCCAGGACGTGCCCAGGCCAGTGGCCACGCACCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp GCAGCCGTGGCCCGGCAGTCGGAGACTCGTCCCTGCGGACCGTGGACGGCAGGTGACAGTGGCCCGGGCTaGCAACGCCCTTGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: AAVARQSETRPCGPWTAGDSGPG*QRPWCR
Trigger: CCTACACCAAGGGCGTTGCCAGCCCGGGCCACTGTC...ACCTGCCGTCCACGGTCCGCAGGGACGAGTCTCCGACTGCCGGGCCACGGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR GCA 90 bp CGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCCCCAGACGCACCCATGAAAGGCCCCTaGACGGTGGGTCTCCCGTGC +
Preference number: 2 (lower is better)
Translates to: RPRRRWTPARAATGAPDAPMKGP*TVGLPC
Trigger: GCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGG...TGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp CGAGGTGACAGTGGCCCGGGCTGGCAACGCCCTTGGTGTAGGCAGCGGGAGAAACCTGCAGGGACAGCGTaGGGCCGCTGGGTTGCGGGA +
Preference number: 2 (lower is better)
Translates to: RGDSGPGWQRPWCRQREKPAGTA*GRWVAG
Trigger: TCCCGCAACCCAGCGGCCGCACGCTGTCCCTGCAGG...TTTCTCCCGCTGCCTACACCAAGGGCGTTGCCAGCCCGGGCCACTGTCACCTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp CGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCCCCAGACGCAGGGTGCCAGAAGGGCTaGGCGTGGGGTCAAACTGCG +
Preference number: 2 (lower is better)
Translates to: RPRRRWTPARAATGAPDAGCQKG*AWGQTA
Trigger: CGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCC...TGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCGATGCCGGTTATTGCTaGCAGGGAAGCCCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAADAGYC*QGSPPG
Trigger: CCCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATC...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCGTCCGAGGCGGCGATaGACGCCAGCAAGAGCAGCG +
Preference number: 2 (lower is better)
Translates to: RDAIVPERTVQAVPSAGARPRRR*TPARAA
Trigger: CGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCCCTCCTCGAACTGCGTaGGACGAGAAAATGCACGGC +
Preference number: 2 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAAPPRTA*DEKMHG
Trigger: GCCGTGCATTTTCTCGTCTCACGCAGTTCGAGGAGG...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp TCCTCATGCACCTCTGGCAGCAGCCGTGGCCCGGCAGTCGGAGACTCGTCCCTGATCAGGGTGCTTCTCTaGGGACAGGGCGGGAAGCCG +
Preference number: 2 (lower is better)
Translates to: SSCTSGSSRGPAVGDSSLIRVLL*GQGGKP
Trigger: CGGCTTCCCGCCCTGTCCGCAGAGAAGCACCCTGAT...CAGGGACGAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCAAGGCCCCTGCACGGTaGGTCTCCCGTGCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSKAPAR*VSRAQP
Trigger: GGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTT...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CGAGGTGACAGTGGCCCGGGCTGGCAACGCCCTTGGTGTAGGCAGCGGGAGAAACATGCAGCTGCACGATaGGGTGTCCTCCGGCCGACG +
Preference number: 2 (lower is better)
Translates to: RGDSGPGWQRPWCRQREKHAAAR*GVLRPT
Trigger: CGTCGGCCGGAGGACACCCCATCGTGCAGCTGCATG...TTTCTCCCGCTGCCTACACCAAGGGCGTTGCCAGCCCGGGCCACTGTCACCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp GGCCCGGCAGTCGGAGACTCGTCCCTGCGGACCGTGGACGGCAGGTGCTGCGGGCCTCTGATTCCGAAATaGCGGGATCTCAACCACCAG +
Preference number: 2 (lower is better)
Translates to: GPAVGDSSLRTVDGRCCGPLIPK*RDLNHQ
Trigger: CTGGTGGTTGAGATCCCGCCATTTCGGAATCAGAGG...CCCGCAGCACCTGCCGTCCACGGTCCGCAGGGACGAGTCTCCGACTGCCGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp TCCTCATGCACCTCTGGCAGCAGCCGTGGCCCGGCAGTCGGAGACTCGTCCCTGGCGGGAGAAAGGTCGTaGAGCTTGGGGCTCACGCCA +
Preference number: 2 (lower is better)
Translates to: SSCTSGSSRGPAVGDSSLAGERS*SLGLTP
Trigger: TGGCGTGAGCCCCAAGCTCCACGACCTTTCTCCCGC...CAGGGACGAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR GCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCCCATGAAAGGCCCCTaGACGGTGGGTCTCCCGTGC +
Preference number: 2 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLPMKGP*TVGLPC
Trigger: GCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGG...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGATTGAACCCCAGGGGTaGCAGAAGGGCTGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: ENARPSEAAMDASKSSDWIEPQG*QKGWAW
Trigger: CCACGCCCAGCCCTTCTGGCACCCCTGGGGTTCAAT...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTAAGGCCCCTGCACGGTaGGTCTCCCGTGCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVKAPAR*VSRAQP
Trigger: GGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTT...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCAGAAGGGCTGGGCGTaGGGTCAAACTGCGTGTGGG +
Preference number: 2 (lower is better)
Translates to: RDAIVPERTVQAVPSAGAQKGWA*GQTACG
Trigger: CCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTG...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCACAGGGAAGCCCTCCTaGGCGAGGACACGTCGGCTC +
Preference number: 2 (lower is better)
Translates to: RLCRSARYRPFLLREPFLTGKPS*ARTRRL
Trigger: GAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGT...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTGGCGTGGGGTCAAACTaGGTGTGGGCCGTTCCCATG +
Preference number: 2 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLGVGSN*VWAVPM
Trigger: CATGGGAACGGCCCACACGCAGTTTGACCCCACGCC...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCGGCGTGGGGTCAAACTaGGTGTGGGCCGTTCCCATG +
Preference number: 2 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSGVGSN*VWAVPM
Trigger: CATGGGAACGGCCCACACGCAGTTTGACCCCACGCC...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCGTGAGACGAGAAAATaGACGGCCGTCCGAGGCGGC +
Preference number: 2 (lower is better)
Translates to: AIVPERTVQAVPSAGALSRETRK*TAVRGG
Trigger: GCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACG...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGGGTGCCAGAAGGGCTaGGCGTGGGGTCAAACTGCG +
Preference number: 2 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVGCQKG*AWGQTA
Trigger: CGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCC...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTCGTCCGAGGCGGCGATaGACGCCAGCAAGAGCAGCG +
Preference number: 2 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSRPRRR*TPARAA
Trigger: CGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCGTCAATCACAGCTCCTaGCTTTCTAGGGTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAAVNHSS*LSRVLL
Trigger: GAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGAC...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCCCCAGACGCAGTCAGTTGGAGGTTCTaGGTGGTACCAGGTGTGAGT +
Preference number: 2 (lower is better)
Translates to: RPRRRWTPARAATGAPDAVSWRF*VVPGVS
Trigger: ACTCACACCTGGTACCACTCAGAACCTCCAACTGAC...TGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp GTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAGCCCGGTCAGTTGGAGGTTCTaGGTGGTACCAGGTGTGAGT +
Preference number: 2 (lower is better)
Translates to: VGRSHERPLHGGSPVLSPVSWRF*VVPGVS
Trigger: ACTCACACCTGGTACCACTCAGAACCTCCAACTGAC...CGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTGATGCCGGTTATTGCTaGCAGGGAAGCCCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLDAGYC*QGSPPG
Trigger: CCCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATC...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp CCTGCAGGGACAGCGTGCGGCCGCTGGGTTGCGGGACGTGAACGCGGAACACCAAGGAGTGGGTGCTCGTaGTGGAGAGGTCATTTCGTA +
Preference number: 2 (lower is better)
Translates to: PAGTACGRWVAGRERGTPRSGCS*WRGHFV
Trigger: TACGAAATGACCTCTCCAGCACGAGCACCCACTCCT...TGGTGTTCCGCGTTCACGTCCCGCAACCCAGCGGCCGCACGCTGTCCCTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR GCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTATTGAACCCCAGGGGTaGCAGAAGGGCTGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGIEPQG*QKGWAW
Trigger: CCACGCCCAGCCCTTCTGGCACCCCTGGGGTTCAAT...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTACAGGGAAGCCCTCCTaGGCGAGGACACGTCGGCTC +
Preference number: 2 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSTGKPS*ARTRRL
Trigger: GAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGT...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGAGCAAGAGCAGCGACTaGAGCCCCAGACGCAGGTTC +
Preference number: 2 (lower is better)
Translates to: QETRLCRSARYRPFLLRESKSSD*SPRRRF
Trigger: GAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTTGCT...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp GGTCTTGGGAGAGGACTTAACCCCTGGCTCACCGGTCCACAGGTTGGAGCAGGCGAGAGGATGGCCTCGTaGCTGGTGGTGGACACGGTC +
Preference number: 2 (lower is better)
Translates to: GLGRGLNPWLTGPQVGAGERMAS*LVVDTV
Trigger: GACCGTGTCCACCACCAGCCACGAGGCCATCCTCTC...GCCTGCTCCAACCTGTGGACCGGTGAGCCAGGGGTTAAGTCCTCTCCCAAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp TCCTCATGCACCTCTGGCAGCAGCCGTGGCCCGGCAGTCGGAGACTCGTCCCTGAGAGGACTTAACCCCTaGCTCACCGGTCCACAGGTT +
Preference number: 2 (lower is better)
Translates to: SSCTSGSSRGPAVGDSSLRGLNP*LTGPQV
Trigger: AACCTGTGGACCGGTGAGCCAGGGGTTAAGTCCTCT...CAGGGACGAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR CAA 90 bp AGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATaGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: SDWSPRRRFQNGCRL*LTGKPSWARTRRLC
Trigger: ACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CAA 90 bp AGCTGGGGTCGGGTGGCATCGCGAGCTGCTGGCTGTAGTATGGTCTaGGGAGAGGACTTAACCCCTGGCTCACCGGTCCACAGGTTGGAG +
Preference number: 2 (lower is better)
Translates to: SWGRVASRAAGCSMV*GEDLTPGSPVHRLE
Trigger: CTCCAACCTGTGGACCGGTGAGCCAGGGGTTAAGTCCTCTCCCAAGACCATACTACAGCCAGCAGCTCGCGATGCCACCCGACCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR TCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTGTGGGCCGTTCCCATaGAAGGCCCCTGCACGGTGG +
Preference number: 2 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPCGPFP*KAPARW
Trigger: CCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACA...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTGATGCCGGTTATTGCTaGCAGGGAAGCCCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGDAGYC*QGSPPG
Trigger: CCCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATC...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCGACGTTCTGTTCAGTaGCTTCACAGCCGGAGCCTC +
Preference number: 2 (lower is better)
Translates to: QETRLCRSARYRPFLLRERRSVQ*LHSRSL
Trigger: GAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCG...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCAAGGCCCCTGCACGGTaGGTCTCCCGTGCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFKAPAR*VSRAQP
Trigger: GGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTT...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTGGGTCAAACTGCGTGTaGGCCGTTCCCATGAAAGGC +
Preference number: 2 (lower is better)
Translates to: AIVPERTVQAVPSAGALSGSNCV*AVPMKG
Trigger: GCCTTTCATGGGAACGGCCCACACGCAGTTTGACCC...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp GCTGGCATCAGGGTGCTTCTCTGCGGACAGGGCGGGAAGCCGGCCACGAGGCAGAAAGTCTTTGTCTGCTaGAGTCAGCATACCCCTGCT +
Preference number: 2 (lower is better)
Translates to: AGIRVLLCGQGGKPATRQKVFVC*SQHTPA
Trigger: AGCAGGGGTATGCTGACTTCAGCAGACAAAGACTTT...CTGCCTCGTGGCCGGCTTCCCGCCCTGTCCGCAGAGAAGCACCCTGATGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR TCA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACTCCCTTCTGTTGTCATaGGATGACTTCTCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDSLLLS*DDFSSR
Trigger: CCTGGAGGAGAAGTCATCTCATGACAACAGAAGGGA...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTGTGGGCCGTTCCCATaGAAGGCCCCTGCACGGTGG +
Preference number: 2 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFCGPFP*KAPARW
Trigger: CCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACA...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGGCACTTCCAGTATTaGACCCCAGGGGTGCCAGAA +
Preference number: 2 (lower is better)
Translates to: SNCVRRENARPSEAAMDARHFQY*TPGVPE
Trigger: TTCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCT...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTAGGCACTTCCAGTATTaGACCCCAGGGGTGCCAGAA +
Preference number: 2 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLRHFQY*TPGVPE
Trigger: TTCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCT...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGCAATGCTCAATTCTATaGTGCCCTGATGGTCTGGTT +
Preference number: 2 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTQCSIL*CPDGLV
Trigger: AACCAGACCATCAGGGCATCATAGAATTGAGCATTG...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCGGCGTGGGGTCAAACTaGGTGTGGGCCGTTCCCATG +
Preference number: 2 (lower is better)
Translates to: GSPFSISDVLFSDFTAGAGVGSN*VWAVPM
Trigger: CATGGGAACGGCCCACACGCAGTTTGACCCCACGCC...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp ACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTGGCGTGGGGTCAAACTaGGTGTGGGCCGTTCCCATG +
Preference number: 2 (lower is better)
Translates to: TVQAVPSAGALSPSATFCGVGSN*VWAVPM
Trigger: CATGGGAACGGCCCACACGCAGTTTGACCCCACGCC...ACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGACAAAGATGCGAGCATaGGACTATGAACAAGCCTAC +
Preference number: 2 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTTKMRA*DYEQAY
Trigger: GTAGGCTTGTTCATAGTCGCATGCTCGCATCTTTGT...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACAGGTTCCAAAACGGATaGCGGTTATTGCTGACAGGG +
Preference number: 2 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDRFQNG*RLLLTG
Trigger: CCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCT...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCCGTGAGACGAGAAAATaGACGGCCGTCCGAGGCGGC +
Preference number: 2 (lower is better)
Translates to: GSPFSISDVLFSDFTAGARETRK*TAVRGG
Trigger: GCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACG...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp ACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTCGTGAGACGAGAAAATaGACGGCCGTCCGAGGCGGC +
Preference number: 2 (lower is better)
Translates to: TVQAVPSAGALSPSATFCRETRK*TAVRGG
Trigger: GCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACG...ACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTGCCTCCACCCGCAGGTaGAATTCAGGCAGGTTCCAT +
Preference number: 2 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGASTRR*NSGRFH
Trigger: ATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGC...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp TACAACTGGTCCAACTCTTCAGGCTCTCGCTTGACCGTTACAGGAATAGGGGCCGGGTTGGAGGCCACCTaGAGGGACAGCGTGCGGCCG +
Preference number: 2 (lower is better)
Translates to: YNWSNSSGSRLTVTGIGAGLEAT*RDSVRP
Trigger: CGGCCGCACGCTGTCCCTGCAGGTGGCCTCCAACCC...GGCCCCTATTCCTGTAACGGTCAAGCGAGAGCCTGAAGAGTTGGACCAGTTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp CCTGCAGGGACAGCGTGCGGCCGCTGGGTTGCGGGACGTGAACGCGGAACACCAAGTGGGTGCTCGTGCTaGAGAGGTCATTTCGTATTA +
Preference number: 2 (lower is better)
Translates to: PAGTACGRWVAGRERGTPSGCSC*RGHFVL
Trigger: TAATACGAAATGACCTCTCCAGCACGAGCACCCACT...TGGTGTTCCGCGTTCACGTCCCGCAACCCAGCGGCCGCACGCTGTCCCTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATGGGTCAAACTGCGTGTaGGCCGTTCCCATGAAAGGC +
Preference number: 2 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHGSNCV*AVPMKG
Trigger: GCCTTTCATGGGAACGGCCCACACGCAGTTTGACCC...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CGAGGTGACAGTGGCCCGGGCTGGCAACGCCCTTGGTGTAGGCAGCGGGAGAAAGGATCTCCAGGACTTTaGTGTTGGAGAGGATGGCCT +
Preference number: 2 (lower is better)
Translates to: RGDSGPGWQRPWCRQREKGSPGL*CWRGWP
Trigger: AGGCCATCCTCTCCAACACCAAAGTCCTGGAGATCC...TTTCTCCCGCTGCCTACACCAAGGGCGTTGCCAGCCCGGGCCACTGTCACCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp TTATTTAACAACCACACTGACAGTGGCCTCGAGGTAGGCCCAGCGTCAACACTGCTGTGGCCACGGTCCTaGGGGCCGCCACCTCCCACC +
Preference number: 2 (lower is better)
Translates to: LFNNHTDSGLEVGPASTLLWPRS*GPPPPT
Trigger: GGTGGGAGGTGGCGGCCCCCAGGACCGTGGCCACAG...CAGTGTTGACGCTGGGCCTACCTCGAGGCCACTGTCAGTGTGGTTGTTAAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR CAA 90 bp GCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATaGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCC +
Preference number: 2 (lower is better)
Translates to: AFRLFLSVSETQETR*CRSARYRPFLLREP
Trigger: GGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTAGGCACTTCCAGTATTaGACCCCAGGGGTGCCAGAA +
Preference number: 2 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVRHFQY*TPGVPE
Trigger: TTCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCT...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTCCTCCTCGAACTGCGTaGGACGAGAAAATGCACGGC +
Preference number: 2 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSPPRTA*DEKMHG
Trigger: GCCGTGCATTTTCTCGTCTCACGCAGTTCGAGGAGG...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp TCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGAGGAGTGGGTGCTCGTaGTGGAGAGGTCATTTCGTA +
Preference number: 2 (lower is better)
Translates to: SNCVWAVPMKGPCTVGLPRSGCS*WRGHFV
Trigger: TACGAAATGACCTCTCCAGCACGAGCACCCACTCCT...CGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
3UTR-3UTR GCA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGATTGAACCCCAGGGGTaGCAGAAGGGCTGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWIEPQG*QKGWAW
Trigger: CCACGCCCAGCCCTTCTGGCACCCCTGGGGTTCAAT...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGGTTCCAAAACGGATaGCGGTTATTGCTGACAGGG +
Preference number: 2 (lower is better)
Translates to: ENARPSEAAMDASKSSDWRFQNG*RLLLTG
Trigger: CCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCT...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp GTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAGCCCGTTAATGTTCAGCTCCTaGCATTCAGTCAGTTGGAGG +
Preference number: 2 (lower is better)
Translates to: VGRSHERPLHGGSPVLSPLMFSS*HSVSWR
Trigger: CCTCCAACTGACTGAATGCCAGGAGCTGAACATTAA...CGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CCCAGGGGTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCTTAATGTTCAGCTCCTaGCATTCAGTCAGTTGGAGG +
Preference number: 2 (lower is better)
Translates to: PRGARRAGRGVKLRVGRSLMFSS*HSVSWR
Trigger: CCTCCAACTGACTGAATGCCAGGAGCTGAACATTAA...GGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCTGCTTTCCTTCTTGTTaGAGAGCCAATCTTTGCACA +
Preference number: 2 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAACFPSC*RANLCT
Trigger: TGTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCA...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp TACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACAAAGGCCCCTGCACGGTaGGTCTCCCGTGCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: YVQTDGMAFRLFLSVSETKAPAR*VSRAQP
Trigger: GGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTT...TGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGCAGAAGGGCTGGGCGTaGGGTCAAACTGCGTGTGGG +
Preference number: 2 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQQKGWA*GQTACG
Trigger: CCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTG...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCCAGAAGGGCTGGGCGTaGGGTCAAACTGCGTGTGGG +
Preference number: 2 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFQKGWA*GQTACG
Trigger: CCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTG...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACGGGTGCCAGAAGGGCTaGGCGTGGGGTCAAACTGCG +
Preference number: 2 (lower is better)
Translates to: FLSVSETQETRLCRSARYGCQKG*AWGQTA
Trigger: CGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCC...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGGTCAATCACAGCTCCTaGCTTTCTAGGGTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: QETRLCRSARYRPFLLREVNHSS*LSRVLL
Trigger: GAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGAC...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTGTCAATCACAGCTCCTaGCTTTCTAGGGTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLVNHSS*LSRVLL
Trigger: GAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGAC...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp GGTCTTGGGAGAGGACTTAACCCCTGGCTCACCGGTCCACAGGTTGGAGCAGGCATACCCCTGCTGAACTaGGTGCTCCAATGTGGCAAC +
Preference number: 2 (lower is better)
Translates to: GLGRGLNPWLTGPQVGAGIPLLN*VLQCGN
Trigger: GTTGCCACATTGGAGCACTCAGTTCAGCAGGGGTAT...GCCTGCTCCAACCTGTGGACCGGTGAGCCAGGGGTTAAGTCCTCTCCCAAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR TCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTGTCAGTTGGAGGTTCTaGGTGGTACCAGGTGTGAGT +
Preference number: 2 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGVSWRF*VVPGVS
Trigger: ACTCACACCTGGTACCACTCAGAACCTCCAACTGAC...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp TTATTTAACAACCACACTGACAGTGGCCTCGAGGTAGGCCCAGCGTCAACACTGCATTCCCACGGCGGGTaGGGGGCAGGCAGGTTGAGG +
Preference number: 2 (lower is better)
Translates to: LFNNHTDSGLEVGPASTLHSHGG*GAGRLR
Trigger: CCTCAACCTGCCTGCCCCTCACCCGCCGTGGGAATG...CAGTGTTGACGCTGGGCCTACCTCGAGGCCACTGTCAGTGTGGTTGTTAAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR-3UTR GCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATGGGTCCTCCTCGAACTaGGTGAGACGAGAAAATGCA +
Preference number: 2 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHGSSSN*VRRENA
Trigger: TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCC...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GGTCTTGGGAGAGGACTTAACCCCTGGCTCACCGGTCCACAGGTTGGAGCAGGCCCAGAGAATTCGGCTTaGACAGGTCCCGGTCAGTTT +
Preference number: 2 (lower is better)
Translates to: GLGRGLNPWLTGPQVGAGPENSA*TGPGQF
Trigger: AAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGG...GCCTGCTCCAACCTGTGGACCGGTGAGCCAGGGGTTAAGTCCTCTCCCAAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGAAGGCCCCTGCACGGTaGGTCTCCCGTGCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: GMAFRLFLSVSETQETRLKAPAR*VSRAQP
Trigger: GGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTT...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp ACCACCAGAGAATTCGGCTTGCACAGGTCCCGGTCAGTTTTCGCTTCCATCTCCTGGCCTCGTGGCTGGTaGTGGACACGGTCTTCCCTG +
Preference number: 2 (lower is better)
Translates to: TTREFGLHRSRSVFASISWPRGW*WTRSSL
Trigger: CAGGGAAGACCGTGTCCACCACCAGCCACGAGGCCA...GGAGATGGAAGCGAAAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp TTCAGGATTCCGGCACAGTCAATGACGGCTCGCATGCTGTTCTCCGGCAGGAGTTGGTGTTGGAGAGGATaGCCTCGTGGCTGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: FRIPAQSMTARMLFSGRSWCWRG*PRGWWW
Trigger: CCACCACCAGCCACGAGGCCATCCTCTCCAACACCA...ACTCCTGCCGGAGAACAGCATGCGAGCCGTCATTGACTGTGCCGGAATCCTGAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR TCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTAAAGTCTTTGTCTGCTaGAGTCAGCATACCCCTGCT +
Preference number: 2 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLKVFVC*SQHTPA
Trigger: AGCAGGGGTATGCTGACTTCAGCAGACAAAGACTTT...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGTGGGCCGTTCCCATaGAAGGCCCCTGCACGGTGG +
Preference number: 2 (lower is better)
Translates to: GMAFRLFLSVSETQETRLCGPFP*KAPARW
Trigger: CCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACA...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATGCGAGCATGCGACTATaGACAAGCCTACGGTTTCAA +
Preference number: 2 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHASMRL*TSLRFQ
Trigger: TTGAAACCGTAGGCTTGTTCATAGTCGCATGCTCGC...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGCCTCCTCGAACTGCGTaGGACGAGAAAATGCACGGC +
Preference number: 2 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQPPRTA*DEKMHG
Trigger: GCCGTGCATTTTCTCGTCTCACGCAGTTCGAGGAGG...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTAGGTTCCAAAACGGATaGCGGTTATTGCTGACAGGG +
Preference number: 2 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGRFQNG*RLLLTG
Trigger: CCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCT...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGGCCTCCACCCGCAGGTaGAATTCAGGCAGGTTCCAT +
Preference number: 2 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQASTRR*NSGRFH
Trigger: ATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGC...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp TCGCTTGACCGTTACAGGAATAGGGGCCAAATTAGGACTACCGTCCTCATGCACCCGCTGGCATCAGGGTaGTTCTCTGCGGACAGGGCG +
Preference number: 2 (lower is better)
Translates to: SLDRYRNRGQIRTTVLMHPLASG*FSADRA
Trigger: CGCCCTGTCCGCAGAGAAGCACCCTGATGCCAGCGG...GTGCATGAGGACGGTAGTCCTAATTTGGCCCCTATTCCTGTAACGGTCAAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCAGTGGGTGCTCGTGCTaGAGAGGTCATTTCGTATTA +
Preference number: 2 (lower is better)
Translates to: RLCRSARYRPFLLREPFLSGCSC*RGHFVL
Trigger: TAATACGAAATGACCTCTCCAGCACGAGCACCCACT...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
3UTR-3UTR CCA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGCTCCAGGTGACACAGTaGTCTCCCTTCCTCCCTGCT +
Preference number: 2 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWLQVTQ*SPFLPA
Trigger: AGCAGGGAGGAAGGGAGACCACTGTGTCACCTGGAG...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGGGGTCAAACTGCGTGTaGGCCGTTCCCATGAAAGGC +
Preference number: 2 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQGSNCV*AVPMKG
Trigger: GCCTTTCATGGGAACGGCCCACACGCAGTTTGACCC...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCAGAAGGGCTGGGCGTaGGGTCAAACTGCGTGTGGG +
Preference number: 2 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFQKGWA*GQTACG
Trigger: CCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTG...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATGGGTGCCAGAAGGGCTaGGCGTGGGGTCAAACTGCG +
Preference number: 2 (lower is better)
Translates to: DREALLGEDTSALLLFIHGCQKG*AWGQTA
Trigger: CGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCC...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTAGGAGCTGGGGTCGGGTaGCATCGCGAGCTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLGAGVG*HRELLA
Trigger: AGCCAGCAGCTCGCGATGCCACCCGACCCCAGCTCC...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR TCA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGAGTGGTACCAGGTGTaGGTTCAGTTTATTTATTCA +
Preference number: 2 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDEWYQV*VQFIYS
Trigger: TGAATAAATAAACTGAACTCACACCTGGTACCACTC...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCATCCCTTCTGTTGTCATaGGATGACTTCTCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: SATFCSVTSQPEPPPAGASLLLS*DDFSSR
Trigger: CCTGGAGGAGAAGTCATCTCATGACAACAGAAGGGA...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTaGGACACAAGAGACGCGATT +
Preference number: 2 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVVSFRE*DTRDAI
Trigger: AATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAAC...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCAGGAGTGGGTGCTCGTaGTGGAGAGGTCATTTCGTA +
Preference number: 2 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPRSGCS*WRGHFV
Trigger: TACGAAATGACCTCTCCAGCACGAGCACCCACTCCT...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
3UTR-3UTR GCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGGGCGTGGGGTCAAACTaGGTGTGGGCCGTTCCCATG +
Preference number: 2 (lower is better)
Translates to: GMAFRLFLSVSETQETRLGVGSN*VWAVPM
Trigger: CATGGGAACGGCCCACACGCAGTTTGACCCCACGCC...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCGTACACACATGCAAATaGAGGCTATCCTGTAACAGG +
Preference number: 2 (lower is better)
Translates to: SNCVRRENARPSEAAMDAVHTCK*RLSCNR
Trigger: CCTGTTACAGGATAGCCTGCATTTGCATGTGTGTAC...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTACTAATTGTACAGAGTaGCCAGCAAGGCCTACACAA +
Preference number: 2 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLTNCTE*PARPTQ
Trigger: TTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGT...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTAGTGGGTGCTCGTGCTaGAGAGGTCATTTCGTATTA +
Preference number: 2 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVSGCSC*RGHFVL
Trigger: TAATACGAAATGACCTCTCCAGCACGAGCACCCACT...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
3UTR-3UTR CCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTCTCCAGGTGACACAGTaGTCTCCCTTCCTCCCTGCT +
Preference number: 2 (lower is better)
Translates to: GASTRRCNSGRFHKGALILQVTQ*SPFLPA
Trigger: AGCAGGGAGGAAGGGAGACCACTGTGTCACCTGGAG...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp TACAACTGGTCCAACTCTTCAGGCTCTCGCTTGACCGTTACAGGAATAGGGGCCGGCTGGCAACGCCCTTaGTGTAGGCAGCGGGAGAAA +
Preference number: 2 (lower is better)
Translates to: YNWSNSSGSRLTVTGIGAGWQRP*CRQREK
Trigger: TTTCTCCCGCTGCCTACACCAAGGGCGTTGCCAGCC...GGCCCCTATTCCTGTAACGGTCAAGCGAGAGCCTGAAGAGTTGGACCAGTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp TTATTTAACAACCACACTGACAGTGGCCTCGAGGTAGGCCCAGCGTCAACACTGCTGCCAGGTGGGGTGTaGACTGGAGGTAGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: LFNNHTDSGLEVGPASTLLPGGV*TGGSRS
Trigger: GCTCCTGCTACCTCCAGTCCACACCCCACCTGGCAG...CAGTGTTGACGCTGGGCCTACCTCGAGGCCACTGTCAGTGTGGTTGTTAAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR CAA 90 bp ACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTaGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGG +
Preference number: 2 (lower is better)
Translates to: TRLHGYVQTDGMAFR*FLSVSETQETRLCR
Trigger: CCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGATACCCCTGCTGAACTaGGTGCTCCAATGTGGCAAC +
Preference number: 2 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQIPLLN*VLQCGN
Trigger: GTTGCCACATTGGAGCACTCAGTTCAGCAGGGGTAT...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
3UTR-3UTR TCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTCAGCATACCCCTGCTaGACTGAGTGCTCCAATGTG +
Preference number: 2 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFSAYPC*TECSNV
Trigger: CACATTGGAGCACTCAGTTCAGCAGGGGTATGCTGA...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGGAGTGGTACCAGGTGTaGGTTCAGTTTATTTATTCA +
Preference number: 2 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLEWYQV*VQFIYS
Trigger: TGAATAAATAAACTGAACTCACACCTGGTACCACTC...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGGTCAGTTGGAGGTTCTaGGTGGTACCAGGTGTGAGT +
Preference number: 2 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWVSWRF*VVPGVS
Trigger: ACTCACACCTGGTACCACTCAGAACCTCCAACTGAC...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGTCAGTTGGAGGTTCTaGGTGGTACCAGGTGTGAGT +
Preference number: 2 (lower is better)
Translates to: LEPQTQVPKRMPVIADREVSWRF*VVPGVS
Trigger: ACTCACACCTGGTACCACTCAGAACCTCCAACTGAC...TTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCCTTCTGTTGTCATaGGATGACTTCTCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPSLLLS*DDFSSR
Trigger: CCTGGAGGAGAAGTCATCTCATGACAACAGAAGGGA...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTCAATGCTCAATTCTATaGTGCCCTGATGGTCTGGTT +
Preference number: 2 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVQCSIL*CPDGLV
Trigger: AACCAGACCATCAGGGCATCATAGAATTGAGCATTG...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GCAGGAGTGTACGTGACAGCCCAGGAAACGTTCCAAATGTTGGAGACTCATACTATTGAACCCCAGGGGTaGCAGAAGGGCTGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: AGVYVTAQETFQMLETHTIEPQG*QKGWAW
Trigger: CCACGCCCAGCCCTTCTGGCACCCCTGGGGTTCAAT...AGTATGAGTCTCCAACATTTGGAACGTTTCCTGGGCTGTCACGTACACTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp ACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTAGGTTCCAAAACGGATaGCGGTTATTGCTGACAGGG +
Preference number: 2 (lower is better)
Translates to: TVQAVPSAGALSPSATFCRFQNG*RLLLTG
Trigger: CCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCT...ACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTTGCTTTCCTTCTTGTTaGAGAGCCAATCTTTGCACA +
Preference number: 2 (lower is better)
Translates to: AIVPERTVQAVPSAGALSCFPSC*RANLCT
Trigger: TGTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCA...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCAGGGTCAAACTGCGTGTaGGCCGTTCCCATGAAAGGC +
Preference number: 2 (lower is better)
Translates to: TAPGFLGSSSNCVRRENAGSNCV*AVPMKG
Trigger: GCCTTTCATGGGAACGGCCCACACGCAGTTTGACCC...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGGGGTCAAACTGCGTGTaGGCCGTTCCCATGAAAGGC +
Preference number: 2 (lower is better)
Translates to: PTATVNHSSWLSRVLLELGSNCV*AVPMKG
Trigger: GCCTTTCATGGGAACGGCCCACACGCAGTTTGACCC...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTACAGAAGGGCTGGGCGTaGGGTCAAACTGCGTGTGGG +
Preference number: 2 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLQKGWA*GQTACG
Trigger: CCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTG...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
3UTR-3UTR CCA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAAACGTTCCAAATGTTaGAGACTCATACTAGAGTCC +
Preference number: 2 (lower is better)
Translates to: ENARPSEAAMDASKSSDWKRSKC*RLILES
Trigger: GGACTCTAGTATGAGTCTCCAACATTTGGAACGTTT...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp TGCTCGTGCTGGAGAGGTCATTTCGTATTATTTCATTTACGTCATCCAGGTACAGCGTGGCCACTGGCCTaGGCACGTCCTGGACGGCGG +
Preference number: 2 (lower is better)
Translates to: CSCWRGHFVLFHLRHPGTAWPLA*ARPGRR
Trigger: CCGCCGTCCAGGACGTGCCCAGGCCAGTGGCCACGC...TGTACCTGGATGACGTAAATGAAATAATACGAAATGACCTCTCCAGCACGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp TTATTTAACAACCACACTGACAGTGGCCTCGAGGTAGGCCCAGCGTCAACACTGATCGAGGCAGGAGTGTaGCTGGTAGGACAGGACGGC +
Preference number: 2 (lower is better)
Translates to: LFNNHTDSGLEVGPASTLIEAGV*LVGQDG
Trigger: GCCGTCCTGTCCTACCAGCCACACTCCTGCCTCGAT...CAGTGTTGACGCTGGGCCTACCTCGAGGCCACTGTCAGTGTGGTTGTTAAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR-3UTR TCA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCAAAGTCTTTGTCTGCTaGAGTCAGCATACCCCTGCT +
Preference number: 2 (lower is better)
Translates to: GSPFSISDVLFSDFTAGAKVFVC*SQHTPA
Trigger: AGCAGGGGTATGCTGACTTCAGCAGACAAAGACTTT...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGCACACAACGCAGGGCTaGGCATTAAAGTGGCGTTTT +
Preference number: 2 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQHTTQG*ALKWRF
Trigger: AAAACGCCACTTTAATGCTCAGCCCTGCGTTGTGTG...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCCACACAACGCAGGGCTaGGCATTAAAGTGGCGTTTT +
Preference number: 2 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFHTTQG*ALKWRF
Trigger: AAAACGCCACTTTAATGCTCAGCCCTGCGTTGTGTG...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCACACAACGCAGGGCTaGGCATTAAAGTGGCGTTTT +
Preference number: 2 (lower is better)
Translates to: GALSPSATFCSVTSQPEPHTTQG*ALKWRF
Trigger: AAAACGCCACTTTAATGCTCAGCCCTGCGTTGTGTG...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCTCAACCGTGTTTCAATaGATAAACCATGCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: RDAIVPERTVQAVPSAGASTVFQ*INHAFW
Trigger: CCAAAAAGCATGGTTTATTCATTGAAACACGGTTGA...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATTGACGGTGGGTCTCCCGTaGTCAGCCCGGCCACCTCCC +
Preference number: 2 (lower is better)
Translates to: AQFYDALMVWLNKALPVLTVGLP*SARPPP
Trigger: GGGAGGTGGCCGGGCTGAGCACGGGAGACCCACCGT...CAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAACAAAGATGCGAGCATaGGACTATGAACAAGCCTAC +
Preference number: 2 (lower is better)
Translates to: SATFCSVTSQPEPPPAGATKMRA*DYEQAY
Trigger: GTAGGCTTGTTCATAGTCGCATGCTCGCATCTTTGT...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGAGATATGTACACACATaGAAATGCAGGCTATCCTGT +
Preference number: 2 (lower is better)
Translates to: QETRLCRSARYRPFLLRERYVHT*KCRLSC
Trigger: ACAGGATAGCCTGCATTTGCATGTGTGTACATATCT...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACCGTCCGAGGCGGCGATaGACGCCAGCAAGAGCAGCG +
Preference number: 2 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHRPRRR*TPARAA
Trigger: CGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CTCGTGCTGGAGAGGTCATTTCGTATTATTTCATTTACGTCATCCAGGTACAACGGGGTGCGTGGCCACTaGCCTGGGCACGTCCTGGAC +
Preference number: 2 (lower is better)
Translates to: LVLERSFRIISFTSSRYNGVRGH*PGHVLD
Trigger: GTCCAGGACGTGCCCAGGCCAGTGGCCACGCACCCC...GTTGTACCTGGATGACGTAAATGAAATAATACGAAATGACCTCTCCAGCACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR TCA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGAAAGTCTTTGTCTGCTaGAGTCAGCATACCCCTGCT +
Preference number: 2 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWKVFVC*SQHTPA
Trigger: AGCAGGGGTATGCTGACTTCAGCAGACAAAGACTTT...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCCAATGCTCAATTCTATaGTGCCCTGATGGTCTGGTT +
Preference number: 2 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPQCSIL*CPDGLV
Trigger: AACCAGACCATCAGGGCATCATAGAATTGAGCATTG...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTGGTAAAACCTCACAATaGAATGTGTTTGCAGTTTCT +
Preference number: 2 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLGKTSQ*NVFAVS
Trigger: AGAAACTGCAAACACATTTCATTGTGAGGTTTTACC...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTGCGAGCATGCGACTATaGACAAGCCTACGGTTTCAA +
Preference number: 2 (lower is better)
Translates to: GASTRRCNSGRFHKGALIASMRL*TSLRFQ
Trigger: TTGAAACCGTAGGCTTGTTCATAGTCGCATGCTCGC...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp ATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCATAACCGTGACTATCTaGGTATGCAACCCCCGCCCC +
Preference number: 2 (lower is better)
Translates to: ICLFTVSSFRVQMHTRTPITVTI*VCNPRP
Trigger: GGGGCGGGGGTTGCATACTCAGATAGTCACGGTTAT...GGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
3UTR-3UTR GCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATAGATATGTACACACATaGAAATGCAGGCTATCCTGT +
Preference number: 2 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHRYVHT*KCRLSC
Trigger: ACAGGATAGCCTGCATTTGCATGTGTGTACATATCT...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCACTAATTGTACAGAGTaGCCAGCAAGGCCTACACAA +
Preference number: 2 (lower is better)
Translates to: GSPFSISDVLFSDFTAGATNCTE*PARPTQ
Trigger: TTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGT...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp TACAACTGGTCCAACTCTTCAGGCTCTCGCTTGACCGTTACAGGAATAGGGGCCATGACCTTGGAGTCCTaGAGGAAGTTGTGGCCAGAC +
Preference number: 2 (lower is better)
Translates to: YNWSNSSGSRLTVTGIGAMTLES*RKLWPD
Trigger: GTCTGGCCACAACTTCCTGCAGGACTCCAAGGTCAT...GGCCCCTATTCCTGTAACGGTCAAGCGAGAGCCTGAAGAGTTGGACCAGTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR GCA 90 bp CTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTGCAACACGCCACGCTaGTTTACGGCGACGTCGTTT +
Preference number: 2 (lower is better)
Translates to: LSFSGHRWLGLTNGTSHSCNTPR*FTATSF
Trigger: AAACGACGTCGCCGTAAAGCAGCGTGGCGTGTTGCA...ACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
3UTR-3UTR CCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTAAACGTTCCAAATGTTaGAGACTCATACTAGAGTCC +
Preference number: 2 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGKRSKC*RLILES
Trigger: GGACTCTAGTATGAGTCTCCAACATTTGGAACGTTT...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp TCCAGGTACAACTGGTCCAACTCTTCAGGCTCTCGCTTGACCGTTACAGGAATACCAGGACTTTGGTGTTaGAGAGGATGGCCTCGTGGC +
Preference number: 2 (lower is better)
Translates to: SRYNWSNSSGSRLTVTGIPGLWC*RGWPRG
Trigger: GCCACGAGGCCATCCTCTCCAACACCAAAGTCCTGG...TATTCCTGTAACGGTCAAGCGAGAGCCTGAAGAGTTGGACCAGTTGTACCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTAAGCATTCGATGGGGTTaGAGGCCACCTGCAGGGACA +
Preference number: 2 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLSIRWG*RPPAGT
Trigger: TGTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCT...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR TCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGATACCCCTGCTGAACTaGGTGCTCCAATGTGGCAAC +
Preference number: 2 (lower is better)
Translates to: GMAFRLFLSVSETQETRLIPLLN*VLQCGN
Trigger: GTTGCCACATTGGAGCACTCAGTTCAGCAGGGGTAT...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
3UTR-3UTR TCA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATGTCAGTTGGAGGTTCTaGGTGGTACCAGGTGTGAGT +
Preference number: 2 (lower is better)
Translates to: DREALLGEDTSALLLFIHVSWRF*VVPGVS
Trigger: ACTCACACCTGGTACCACTCAGAACCTCCAACTGAC...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCATCCCTTCTGTTGTCATaGGATGACTTCTCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: TAPGFLGSSSNCVRRENASLLLS*DDFSSR
Trigger: CCTGGAGGAGAAGTCATCTCATGACAACAGAAGGGA...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp GCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATTGTGTGGGCCGTTCCCATaGAAGGCCCCTGCACGGTGG +
Preference number: 2 (lower is better)
Translates to: AQFYDALMVWLNKALPVLCGPFP*KAPARW
Trigger: CCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACA...CAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTATGTTACAAAAGAGCTaGGATGACAGACTGGAAGAT +
Preference number: 2 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSMLQKS*DDRLED
Trigger: ATCTTCCAGTCTGTCATCTCAGCTCTTTTGTAACAT...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGGCGAGCATGCGACTATaGACAAGCCTACGGTTTCAA +
Preference number: 2 (lower is better)
Translates to: PTATVNHSSWLSRVLLELASMRL*TSLRFQ
Trigger: TTGAAACCGTAGGCTTGTTCATAGTCGCATGCTCGC...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTCCAGTAACCTATTaGTGTGCTATTCAAGTTACT +
Preference number: 2 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGCPVTY*CAIQVT
Trigger: AGTAACTTGAATAGCACATCAATAGGTTACTGGACA...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCGATGCCGGTTATTGCTaGCAGGGAAGCCCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTDAGYC*QGSPPG
Trigger: CCCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATC...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTGTGGTAAGGCTTCTGTaGAACAATCATCTTATAACT +
Preference number: 2 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGVVRLL*NNHLIT
Trigger: AGTTATAAGATGATTGTTTCACAGAAGCCTTACCAC...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCACACAACGCAGGGCTaGGCATTAAAGTGGCGTTTT +
Preference number: 2 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFHTTQG*ALKWRF
Trigger: AAAACGCCACTTTAATGCTCAGCCCTGCGTTGTGTG...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCAGTAACCTATTGATGTaGTATTCAAGTTACTTGTGC +
Preference number: 2 (lower is better)
Translates to: RLCRSARYRPFLLREPFLSNLLM*YSSYLC
Trigger: GCACAAGTAACTTGAATAGCACATCAATAGGTTACT...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCTGTAACAGGTTTTTCTaGTTTTGTCCAGTAACCTAT +
Preference number: 2 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSCNRFF*FCPVTY
Trigger: ATAGGTTACTGGACAAAAGCAGAAAAACCTGTTACA...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCGTACACACATGCAAATaGAGGCTATCCTGTAACAGG +
Preference number: 2 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFVHTCK*RLSCNR
Trigger: CCTGTTACAGGATAGCCTGCATTTGCATGTGTGTAC...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGGTACACACATGCAAATaGAGGCTATCCTGTAACAGG +
Preference number: 2 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLVHTCK*RLSCNR
Trigger: CCTGTTACAGGATAGCCTGCATTTGCATGTGTGTAC...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTAGATATGTACACACATaGAAATGCAGGCTATCCTGT +
Preference number: 2 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSRYVHT*KCRLSC
Trigger: ACAGGATAGCCTGCATTTGCATGTGTGTACATATCT...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGACTAATTGTACAGAGTaGCCAGCAAGGCCTACACAA +
Preference number: 2 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQTNCTE*PARPTQ
Trigger: TTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGT...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGTTAATGTTCAGCTCCTaGCATTCAGTCAGTTGGAGG +
Preference number: 2 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLLMFSS*HSVSWR
Trigger: CCTCCAACTGACTGAATGCCAGGAGCTGAACATTAA...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp ACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTGCTTTCCTTCTTGTTaGAGAGCCAATCTTTGCACA +
Preference number: 2 (lower is better)
Translates to: TVQAVPSAGALSPSATFCCFPSC*RANLCT
Trigger: TGTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCA...ACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAAGGGTGCCAGAAGGGCTaGGCGTGGGGTCAAACTGCG +
Preference number: 2 (lower is better)
Translates to: GALIPKARVQVNRVSMNKGCQKG*AWGQTA
Trigger: CGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCC...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAAAACGTTCCAAATGTTaGAGACTCATACTAGAGTCC +
Preference number: 2 (lower is better)
Translates to: SATFCSVTSQPEPPPAGAKRSKC*RLILES
Trigger: GGACTCTAGTATGAGTCTCCAACATTTGGAACGTTT...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGGTCAATCACAGCTCCTaGCTTTCTAGGGTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: GMAFRLFLSVSETQETRLVNHSS*LSRVLL
Trigger: GAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGAC...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp TGCTCGTGCTGGAGAGGTCATTTCGTATTATTTCATTTACGTCATCCAGGTACAAAAGGTCGTGGAGCTTaGGGCTCACGCCAGGGGCCG +
Preference number: 2 (lower is better)
Translates to: CSCWRGHFVLFHLRHPGTKGRGA*GSRQGP
Trigger: CGGCCCCTGGCGTGAGCCCCAAGCTCCACGACCTTT...TGTACCTGGATGACGTAAATGAAATAATACGAAATGACCTCTCCAGCACGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR TCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCAGGCACTTCCAGTATTaGACCCCAGGGGTGCCAGAA +
Preference number: 2 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGRHFQY*TPGVPE
Trigger: TTCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCT...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTAGTAACCTATTGATGTaGTATTCAAGTTACTTGTGC +
Preference number: 2 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVSNLLM*YSSYLC
Trigger: GCACAAGTAACTTGAATAGCACATCAATAGGTTACT...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTAACAGGTTTTTCTaGTTTTGTCCAGTAACCTAT +
Preference number: 2 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGCNRFF*FCPVTY
Trigger: ATAGGTTACTGGACAAAAGCAGAAAAACCTGTTACA...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp TCATTTCGTATTATTTCATTTACGTCATCCAGGTACAACTGGTCCAACTCTTCAGGAGGCGCACTCACCTaGTGTGGCAGCAGGGCCGGG +
Preference number: 2 (lower is better)
Translates to: SFRIISFTSSRYNWSNSSGGALT*CGSRAG
Trigger: CCCGGCCCTGCTGCCACAGCAGGTGAGTGCGCCTCC...TGAAGAGTTGGACCAGTTGTACCTGGATGACGTAAATGAAATAATACGAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR GCA 90 bp GGTCACCCAGGGACTATGGTGCTACGTCCAGGAGAGAAGAGACGACGGAGGCAAATAGCTATACCTATTTaGCTTTTCACCGTAAGCAGC +
Preference number: 2 (lower is better)
Translates to: GHPGTMVLRPGEKRRRRQIAIPI*LFTVSS
Trigger: GCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTAT...TTGCCTCCGTCGTCTCTTCTCTCCTGGACGTAGCACCATAGTCCCTGGGTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR-3UTR CCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGTGCTTTCCTTCTTGTTaGAGAGCCAATCTTTGCACA +
Preference number: 2 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLCFPSC*RANLCT
Trigger: TGTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCA...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAAGGGTGCCAGAAGGGCTaGGCGTGGGGTCAAACTGCG +
Preference number: 2 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDEGCQKG*AWGQTA
Trigger: CGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCC...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCAAACGTTCCAAATGTTaGAGACTCATACTAGAGTCC +
Preference number: 2 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPKRSKC*RLILES
Trigger: GGACTCTAGTATGAGTCTCCAACATTTGGAACGTTT...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp TCCAGGTACAACTGGTCCAACTCTTCAGGCTCTCGCTTGACCGTTACAGGAATACACCGGTCCACAGGTTaGAGCAGGCTCATAATCATC +
Preference number: 2 (lower is better)
Translates to: SRYNWSNSSGSRLTVTGIHRSTG*SRLIII
Trigger: GATGATTATGAGCCTGCTCCAACCTGTGGACCGGTG...TATTCCTGTAACGGTCAAGCGAGAGCCTGAAGAGTTGGACCAGTTGTACCTGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGCTCTGGCAGCAGCCGTaGCCCGGCAGTCGGAGACTC +
Preference number: 2 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLLWQQP*PGSRRL
Trigger: GAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAG...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR CAA 90 bp TTTACGTCATCCAGGTACAACTGGTCCAACTCTTCAGGCTCTCGCTaGACCGTTACAGGAATAGGGGCCAAATTAGGACTACCGTCCTCA +
Preference number: 2 (lower is better)
Translates to: FTSSRYNWSNSSGSR*TVTGIGAKLGLPSS
Trigger: TGAGGACGGTAGTCCTAATTTGGCCCCTATTCCTGTAACGGTCAAGCGAGAGCCTGAAGAGTTGGACCAGTTGTACCTGGATGACGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR TCA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGATACCCCTGCTGAACTaGGTGCTCCAATGTGGCAAC +
Preference number: 2 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRIPLLN*VLQCGN
Trigger: GTTGCCACATTGGAGCACTCAGTTCAGCAGGGGTAT...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
ENST00000590313.5
3UTR-3UTR TCA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATAAAGTCTTTGTCTGCTaGAGTCAGCATACCCCTGCT +
Preference number: 2 (lower is better)
Translates to: DREALLGEDTSALLLFIHKVFVC*SQHTPA
Trigger: AGCAGGGGTATGCTGACTTCAGCAGACAAAGACTTT...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp ACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGAGTGGTACCAGGTGTaGGTTCAGTTTATTTATTCA +
Preference number: 2 (lower is better)
Translates to: TFCSVTSQPEPPPAGAIQEWYQV*VQFIYS
Trigger: TGAATAAATAAACTGAACTCACACCTGGTACCACTC...CTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCAGGCACTTCCAGTATTaGACCCCAGGGGTGCCAGAA +
Preference number: 2 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTRHFQY*TPGVPE
Trigger: TTCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCT...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCAATGCTCAATTCTATaGTGCCCTGATGGTCTGGTT +
Preference number: 2 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFQCSIL*CPDGLV
Trigger: AACCAGACCATCAGGGCATCATAGAATTGAGCATTG...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp ACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGATGTTACAAAAGAGCTaGGATGACAGACTGGAAGAT +
Preference number: 2 (lower is better)
Translates to: TFCSVTSQPEPPPAGAIQMLQKS*DDRLED
Trigger: ATCTTCCAGTCTGTCATCTCAGCTCTTTTGTAACAT...CTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGATGTTACAAAAGAGCTaGGATGACAGACTGGAAGAT +
Preference number: 2 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWMLQKS*DDRLED
Trigger: ATCTTCCAGTCTGTCATCTCAGCTCTTTTGTAACAT...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCATGTTACAAAAGAGCTaGGATGACAGACTGGAAGAT +
Preference number: 2 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFMLQKS*DDRLED
Trigger: ATCTTCCAGTCTGTCATCTCAGCTCTTTTGTAACAT...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp ACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTGTGGTAAGGCTTCTGTaGAACAATCATCTTATAACT +
Preference number: 2 (lower is better)
Translates to: TVQAVPSAGALSPSATFCVVRLL*NNHLIT
Trigger: AGTTATAAGATGATTGTTTCACAGAAGCCTTACCAC...ACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTACAATGTCGGAGTTTCTaGGTTTCAGGATTCCGGCAC +
Preference number: 2 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLQCRSF*VSGFRH
Trigger: GTGCCGGAATCCTGAAACTCAGAAACTCCGACATTG...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR TCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGCTGGGTTGCGGGACGTaGACGCGGAACACCAGCCGT +
Preference number: 2 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLLGCGT*TRNTSR
Trigger: ACGGCTGGTGTTCCGCGTTCACGTCCCGCAACCCAG...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR GCA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGAGGAGTGGGTGCTCGTaGTGGAGAGGTCATTTCGTA +
Preference number: 2 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRRSGCS*WRGHFV
Trigger: TACGAAATGACCTCTCCAGCACGAGCACCCACTCCT...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
ENST00000590313.5
3UTR-3UTR GCA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGCCCATGAAAGGCCCCTaGACGGTGGGTCTCCCGTGC +
Preference number: 2 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQPMKGP*TVGLPC
Trigger: GCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGG...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAAGGCGTGGGGTCAAACTaGGTGTGGGCCGTTCCCATG +
Preference number: 2 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDEGVGSN*VWAVPM
Trigger: CATGGGAACGGCCCACACGCAGTTTGACCCCACGCC...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCAACAAAGATGCGAGCATaGGACTATGAACAAGCCTAC +
Preference number: 2 (lower is better)
Translates to: TAPGFLGSSSNCVRRENATKMRA*DYEQAY
Trigger: GTAGGCTTGTTCATAGTCGCATGCTCGCATCTTTGT...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGGATGCCCTGATGGTCTaGTTAAATAAGGCACTTCCA +
Preference number: 2 (lower is better)
Translates to: PTATVNHSSWLSRVLLELDALMV*LNKALP
Trigger: TGGAAGTGCCTTATTTAACCAGACCATCAGGGCATC...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CTCGTGCTGGAGAGGTCATTTCGTATTATTTCATTTACGTCATCCAGGTACAACGCTGGGAGCATTCGATaGGGTTGGAGGCCACCTGCA +
Preference number: 2 (lower is better)
Translates to: LVLERSFRIISFTSSRYNAGSIR*GWRPPA
Trigger: TGCAGGTGGCCTCCAACCCCATCGAATGCTCCCAGC...GTTGTACCTGGATGACGTAAATGAAATAATACGAAATGACCTCTCCAGCACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR TCA 90 bp ACCAGAGAATTCGGCTTGCACAGGTCCCGGTCAGTTTTCGCTTCCATCTCCCAGGAGTGGTACCAGGTGTaGGTTCAGTTTATTTATTCA +
Preference number: 2 (lower is better)
Translates to: TREFGLHRSRSVFASISQEWYQV*VQFIYS
Trigger: TGAATAAATAAACTGAACTCACACCTGGTACCACTC...CTGGGAGATGGAAGCGAAAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR TCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCTCCTCGAACTGCGTaGGACGAGAAAATGCACGGC +
Preference number: 2 (lower is better)
Translates to: GALIPKARVQVNRVSMNKPPRTA*DEKMHG
Trigger: GCCGTGCATTTTCTCGTCTCACGCAGTTCGAGGAGG...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp ACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGTCAACCGTGTTTCAATaGATAAACCATGCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: TFCSVTSQPEPPPAGAIQSTVFQ*INHAFW
Trigger: CCAAAAAGCATGGTTTATTCATTGAAACACGGTTGA...CTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTATTCAAGTTACTTGTaGTATGTTCGAAGCCAGATT +
Preference number: 2 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPYSSYL*YVRSQI
Trigger: AATCTGGCTTCGAACATAGCACAAGTAACTTGAATA...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp ACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTAGTAACCTATTGATGTaGTATTCAAGTTACTTGTGC +
Preference number: 2 (lower is better)
Translates to: TVQAVPSAGALSPSATFCSNLLM*YSSYLC
Trigger: GCACAAGTAACTTGAATAGCACATCAATAGGTTACT...ACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp CCAGCCTGGATGCCCGTGGTCCCAGGAGATGAAGTTACCCCTGGAGAAGTGTCTATTCCTAAAGGTGCCTaGAAAATAGCTATACCTATT +
Preference number: 2 (lower is better)
Translates to: PAWMPVVPGDEVTPGEVSIPKGA*KIAIPI
Trigger: AATAGGTATAGCTATTTTGCAGGCACCTTTAGGAAT...AGACACTTCTCCAGGGGTAACTTCATCTCCTGGGACCACGGGCATCCAGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR-3UTR CCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGTGCTTTCCTTCTTGTTaGAGAGCCAATCTTTGCACA +
Preference number: 2 (lower is better)
Translates to: PTATVNHSSWLSRVLLELCFPSC*RANLCT
Trigger: TGTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCA...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATGATGCCCTGATGGTCTaGTTAAATAAGGCACTTCCA +
Preference number: 2 (lower is better)
Translates to: DREALLGEDTSALLLFIHDALMV*LNKALP
Trigger: TGGAAGTGCCTTATTTAACCAGACCATCAGGGCATC...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAAAGCAAGAGCAGCGACTaGAGCCCCAGACGCAGGTTC +
Preference number: 2 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDESKSSD*SPRRRF
Trigger: GAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTTGCT...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGGGATGGCCTCGTGGCTaGTGGTGGACACGGTCTTCC +
Preference number: 2 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLGWPRG*WWTRSS
Trigger: GGAAGACCGTGTCCACCACCAGCCACGAGGCCATCC...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp TCACCGGTCCACAGGTTGGAGCAGGCTCATAATCATCAGTGGGTTCTGTTTTTAGACATGGTGGCCATCTaGGGCTTTCTCCACGAAAAT +
Preference number: 2 (lower is better)
Translates to: SPVHRLEQAHNHQWVLFLDMVAI*GFLHEN
Trigger: ATTTTCGTGGAGAAAGCCCCAGATGGCCACCATGTC...TAAAAACAGAACCCACTGATGATTATGAGCCTGCTCCAACCTGTGGACCGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR TCA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGAAAGTCTTTGTCTGCTaGAGTCAGCATACCCCTGCT +
Preference number: 2 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRKVFVC*SQHTPA
Trigger: AGCAGGGGTATGCTGACTTCAGCAGACAAAGACTTT...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
3UTR-3UTR TCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTCAGTTGGAGGTTCTaGGTGGTACCAGGTGTGAGT +
Preference number: 2 (lower is better)
Translates to: EPIFAHINVQLLAFSQLEVSWRF*VVPGVS
Trigger: ACTCACACCTGGTACCACTCAGAACCTCCAACTGAC...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
3UTR-3UTR TCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTTGTCCAGTAACCTATTaGTGTGCTATTCAAGTTACT +
Preference number: 2 (lower is better)
Translates to: GASTRRCNSGRFHKGALICPVTY*CAIQVT
Trigger: AGTAACTTGAATAGCACATCAATAGGTTACTGGACA...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACTGTCCAGTAACCTATTaGTGTGCTATTCAAGTTACT +
Preference number: 2 (lower is better)
Translates to: FLSVSETQETRLCRSARYCPVTY*CAIQVT
Trigger: AGTAACTTGAATAGCACATCAATAGGTTACTGGACA...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTTCAACCGTGTTTCAATaGATAAACCATGCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: GASTRRCNSGRFHKGALISTVFQ*INHAFW
Trigger: CCAAAAAGCATGGTTTATTCATTGAAACACGGTTGA...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTAACAAAGATGCGAGCATaGGACTATGAACAAGCCTAC +
Preference number: 2 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLTKMRA*DYEQAY
Trigger: GTAGGCTTGTTCATAGTCGCATGCTCGCATCTTTGT...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
3UTR-3UTR GCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTATTCAAGTTACTTGTaGTATGTTCGAAGCCAGATT +
Preference number: 2 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFYSSYL*YVRSQI
Trigger: AATCTGGCTTCGAACATAGCACAAGTAACTTGAATA...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTTGTAACAGGTTTTTCTaGTTTTGTCCAGTAACCTAT +
Preference number: 2 (lower is better)
Translates to: GALSPSATFCSVTSQPEPCNRFF*FCPVTY
Trigger: ATAGGTTACTGGACAAAAGCAGAAAAACCTGTTACA...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCAAGATATGTACACACATaGAAATGCAGGCTATCCTGT +
Preference number: 2 (lower is better)
Translates to: TAPGFLGSSSNCVRRENARYVHT*KCRLSC
Trigger: ACAGGATAGCCTGCATTTGCATGTGTGTACATATCT...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp TTATTTAACAACCACACTGACAGTGGCCTCGAGGTAGGCCCAGCGTCAACACTGAGGGATCAAGGAAAATaGATCCGAAGCTTCCCTTTT +
Preference number: 2 (lower is better)
Translates to: LFNNHTDSGLEVGPASTLRDQGK*IRSFPF
Trigger: AAAAGGGAAGCTTCGGATGCATTTTCCTTGATCCCT...CAGTGTTGACGCTGGGCCTACCTCGAGGCCACTGTCAGTGTGGTTGTTAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR-3UTR CCA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAACTCCAGGTGACACAGTaGTCTCCCTTCCTCCCTGCT +
Preference number: 2 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDELQVTQ*SPFLPA
Trigger: AGCAGGGAGGAAGGGAGACCACTGTGTCACCTGGAG...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGAAACGTTCCAAATGTTaGAGACTCATACTAGAGTCC +
Preference number: 2 (lower is better)
Translates to: PTATVNHSSWLSRVLLELKRSKC*RLILES
Trigger: GGACTCTAGTATGAGTCTCCAACATTTGGAACGTTT...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCGGTAAAACCTCACAATaGAATGTGTTTGCAGTTTCT +
Preference number: 2 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFGKTSQ*NVFAVS
Trigger: AGAAACTGCAAACACATTTCATTGTGAGGTTTTACC...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATATGTTACAAAAGAGCTaGGATGACAGACTGGAAGAT +
Preference number: 2 (lower is better)
Translates to: DREALLGEDTSALLLFIHMLQKS*DDRLED
Trigger: ATCTTCCAGTCTGTCATCTCAGCTCTTTTGTAACAT...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACGCGAGCATGCGACTATaGACAAGCCTACGGTTTCAA +
Preference number: 2 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHASMRL*TSLRFQ
Trigger: TTGAAACCGTAGGCTTGTTCATAGTCGCATGCTCGC...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp TCATTTCGTATTATTTCATTTACGTCATCCAGGTACAACTGGTCCAACTCTTCACGTCCGCCGTCCCAATaGAAAGCTGCAGCATCAGCG +
Preference number: 2 (lower is better)
Translates to: SFRIISFTSSRYNWSNSSRPPSQ*KAAASA
Trigger: CGCTGATGCTGCAGCTTTTCATTGGGACGGCGGACG...TGAAGAGTTGGACCAGTTGTACCTGGATGACGTAAATGAAATAATACGAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR TCA 90 bp CGTATTATTTCATTTACGTCATCCAGGTACAACTGGTCCAACTCTTCAGGCTCTTGCAGACGTAGAAACTaGCGTGAACGGGGCTGGTTA +
Preference number: 2 (lower is better)
Translates to: RIISFTSSRYNWSNSSGSCRRRN*RERGWL
Trigger: TAACCAGCCCCGTTCACGTCAGTTTCTACGTCTGCA...AGAGCCTGAAGAGTTGGACCAGTTGTACCTGGATGACGTAAATGAAATAATACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR GCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCACAAAGATGCGAGCATaGGACTATGAACAAGCCTAC +
Preference number: 2 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGTKMRA*DYEQAY
Trigger: GTAGGCTTGTTCATAGTCGCATGCTCGCATCTTTGT...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACTGTAACAGGTTTTTCTaGTTTTGTCCAGTAACCTAT +
Preference number: 2 (lower is better)
Translates to: FLSVSETQETRLCRSARYCNRFF*FCPVTY
Trigger: ATAGGTTACTGGACAAAAGCAGAAAAACCTGTTACA...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp TGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAATGCAACACGCCACGCTaGTTTACGGCGACGTCGTTT +
Preference number: 2 (lower is better)
Translates to: CKIAIPICLFTVSSFRVQCNTPR*FTATSF
Trigger: AAACGACGTCGCCGTAAAGCAGCGTGGCGTGTTGCA...TTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
3UTR-3UTR CCA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCAGTGGGTGCTCGTGCTaGAGAGGTCATTTCGTATTA +
Preference number: 2 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTSGCSC*RGHFVL
Trigger: TAATACGAAATGACCTCTCCAGCACGAGCACCCACT...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
3UTR-3UTR CCA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGCTCCAGGTGACACAGTaGTCTCCCTTCCTCCCTGCT +
Preference number: 2 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQLQVTQ*SPFLPA
Trigger: AGCAGGGAGGAAGGGAGACCACTGTGTCACCTGGAG...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGGGGTCAAACTGCGTGTaGGCCGTTCCCATGAAAGGC +
Preference number: 2 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLGSNCV*AVPMKG
Trigger: GCCTTTCATGGGAACGGCCCACACGCAGTTTGACCC...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CTCGTGCTGGAGAGGTCATTTCGTATTATTTCATTTACGTCATCCAGGTACAACGTGAAACGCTGGTACTaGCTTCGCTTTCTCTTCCCG +
Preference number: 2 (lower is better)
Translates to: LVLERSFRIISFTSSRYNVKRWY*LRFLFP
Trigger: CGGGAAGAGAAAGCGAAGCCAGTACCAGCGTTTCAC...GTTGTACCTGGATGACGTAAATGAAATAATACGAAATGACCTCTCCAGCACGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR TCA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGAGGCACTTCCAGTATTaGACCCCAGGGGTGCCAGAA +
Preference number: 2 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQRHFQY*TPGVPE
Trigger: TTCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCT...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCACAAAGATGCGAGCATaGGACTATGAACAAGCCTAC +
Preference number: 2 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTTKMRA*DYEQAY
Trigger: GTAGGCTTGTTCATAGTCGCATGCTCGCATCTTTGT...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCTATTCAAGTTACTTGTaGTATGTTCGAAGCCAGATT +
Preference number: 2 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFYSSYL*YVRSQI
Trigger: AATCTGGCTTCGAACATAGCACAAGTAACTTGAATA...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCAAGTAACCTATTGATGTaGTATTCAAGTTACTTGTGC +
Preference number: 2 (lower is better)
Translates to: TAPGFLGSSSNCVRRENASNLLM*YSSYLC
Trigger: GCACAAGTAACTTGAATAGCACATCAATAGGTTACT...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCGGGTCCTCCTCGAACTaGGTGAGACGAGAAAATGCA +
Preference number: 2 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCGSSSN*VRRENA
Trigger: TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCC...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp CGTATTATTTCATTTACGTCATCCAGGTACAACTGGTCCAACTCTTCAGGCTCTGTCCCAATGAAAAGCTaGAGCATCAGCGGCTCATTC +
Preference number: 2 (lower is better)
Translates to: RIISFTSSRYNWSNSSGSVPMKS*SISGSF
Trigger: GAATGAGCCGCTGATGCTGCAGCTTTTCATTGGGAC...AGAGCCTGAAGAGTTGGACCAGTTGTACCTGGATGACGTAAATGAAATAATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp AATGCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTACTGAGTGCTCCAATGTaGCAACTAGGAGTGGGTGCT +
Preference number: 2 (lower is better)
Translates to: NAQFYDALMVWLNKALPVLSAPM*QLGVGA
Trigger: AGCACCCACTCCTAGTTGCCACATTGGAGCACTCAG...TACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
3UTR-3UTR CCA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCTTAATGTTCAGCTCCTaGCATTCAGTCAGTTGGAGG +
Preference number: 2 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTLMFSS*HSVSWR
Trigger: CCTCCAACTGACTGAATGCCAGGAGCTGAACATTAA...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCGTCAATCACAGCTCCTaGCTTTCTAGGGTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCVNHSS*LSRVLL
Trigger: GAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGAC...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp GCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATTGAAAGTCTTTGTCTGCTaGAGTCAGCATACCCCTGCT +
Preference number: 2 (lower is better)
Translates to: AQFYDALMVWLNKALPVLKVFVC*SQHTPA
Trigger: AGCAGGGGTATGCTGACTTCAGCAGACAAAGACTTT...CAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAATCCCTTCTGTTGTCATaGGATGACTTCTCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDESLLLS*DDFSSR
Trigger: CCTGGAGGAGAAGTCATCTCATGACAACAGAAGGGA...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTACACACATGCAAATaGAGGCTATCCTGTAACAGG +
Preference number: 2 (lower is better)
Translates to: EPIFAHINVQLLAFSQLEVHTCK*RLSCNR
Trigger: CCTGTTACAGGATAGCCTGCATTTGCATGTGTGTAC...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCTGTCCAGTAACCTATTaGTGTGCTATTCAAGTTACT +
Preference number: 2 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGCPVTY*CAIQVT
Trigger: AGTAACTTGAATAGCACATCAATAGGTTACTGGACA...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp CTCGTGCTGGAGAGGTCATTTCGTATTATTTCATTTACGTCATCCAGGTACAACTTAATGTTCAGCTCCTaGCATTCAGTCAGTTGGAGG +
Preference number: 2 (lower is better)
Translates to: LVLERSFRIISFTSSRYNLMFSS*HSVSWR
Trigger: CCTCCAACTGACTGAATGCCAGGAGCTGAACATTAA...GTTGTACCTGGATGACGTAAATGAAATAATACGAAATGACCTCTCCAGCACGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CCA 90 bp TCATTTCGTATTATTTCATTTACGTCATCCAGGTACAACTGGTCCAACTCTTCATCCTGCAGGAAGTTGTaGCCAGACAGGACCATCTTC +
Preference number: 2 (lower is better)
Translates to: SFRIISFTSSRYNWSNSSSCRKL*PDRTIF
Trigger: GAAGATGGTCCTGTCTGGCCACAACTTCCTGCAGGA...TGAAGAGTTGGACCAGTTGTACCTGGATGACGTAAATGAAATAATACGAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR TCA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACGAGTGGTACCAGGTGTaGGTTCAGTTTATTTATTCA +
Preference number: 2 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHEWYQV*VQFIYS
Trigger: TGAATAAATAAACTGAACTCACACCTGGTACCACTC...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACATGTTACAAAAGAGCTaGGATGACAGACTGGAAGAT +
Preference number: 2 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHMLQKS*DDRLED
Trigger: ATCTTCCAGTCTGTCATCTCAGCTCTTTTGTAACAT...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCGTGGTAAGGCTTCTGTaGAACAATCATCTTATAACT +
Preference number: 2 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTVVRLL*NNHLIT
Trigger: AGTTATAAGATGATTGTTTCACAGAAGCCTTACCAC...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp ATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACAGGGATCAAGGAAAATaGATCCGAAGCTTCCCTTTT +
Preference number: 2 (lower is better)
Translates to: IAIPICLFTVSSFRVQMHRDQGK*IRSFPF
Trigger: AAAAGGGAAGCTTCGGATGCATTTTCCTTGATCCCT...GTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
3UTR-3UTR CCA 90 bp GCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATTGTGCTTTCCTTCTTGTTaGAGAGCCAATCTTTGCACA +
Preference number: 2 (lower is better)
Translates to: AQFYDALMVWLNKALPVLCFPSC*RANLCT
Trigger: TGTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCA...CAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CAA 90 bp CCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTaGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATT +
Preference number: 2 (lower is better)
Translates to: PIFAHINVQLLAFSQ*EVLSGTRCEFSLFI
Trigger: AATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
3UTR-3UTR TCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAAGAGTGGTACCAGGTGTaGGTTCAGTTTATTTATTCA +
Preference number: 2 (lower is better)
Translates to: GALIPKARVQVNRVSMNKEWYQV*VQFIYS
Trigger: TGAATAAATAAACTGAACTCACACCTGGTACCACTC...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGCAATGCTCAATTCTATaGTGCCCTGATGGTCTGGTT +
Preference number: 2 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQQCSIL*CPDGLV
Trigger: AACCAGACCATCAGGGCATCATAGAATTGAGCATTG...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACGGTAAAACCTCACAATaGAATGTGTTTGCAGTTTCT +
Preference number: 2 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHGKTSQ*NVFAVS
Trigger: AGAAACTGCAAACACATTTCATTGTGAGGTTTTACC...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGACTAATTGTACAGAGTaGCCAGCAAGGCCTACACAA +
Preference number: 2 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLTNCTE*PARPTQ
Trigger: TTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGT...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CCA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGGATGCCCTGATGGTCTaGTTAAATAAGGCACTTCCA +
Preference number: 2 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQDALMV*LNKALP
Trigger: TGGAAGTGCCTTATTTAACCAGACCATCAGGGCATC...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CAA 90 bp TATATTACACTTAGGTTGCATGTTATTTACAATCACTTTCTAATGTaGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: YITLRLHVIYNHFLM*PSGNLQLLSITAPG
Trigger: GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCTAAGTGTAATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCGAGTGGTACCAGGTGTaGGTTCAGTTTATTTATTCA +
Preference number: 2 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCEWYQV*VQFIYS
Trigger: TGAATAAATAAACTGAACTCACACCTGGTACCACTC...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CAA 90 bp TTTCTGCTTTTGTCCAGTAACCTATTGATGTGCTATTCAAGTTACTaGTGCTATGTTCGAAGCCAGATTAAAAACAAAGATGCGAGCATG +
Preference number: 2 (lower is better)
Translates to: FLLLSSNLLMCYSSY*CYVRSQIKNKDASM
Trigger: CATGCTCGCATCTTTGTTTTTAATCTGGCTTCGAACATAGCACAAGTAACTTGAATAGCACATCAATAGGTTACTGGACAAAAGCAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGGGTAAAACCTCACAATaGAATGTGTTTGCAGTTTCT +
Preference number: 2 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLGKTSQ*NVFAVS
Trigger: AGAAACTGCAAACACATTTCATTGTGAGGTTTTACC...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR TCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGGTGGTAAGGCTTCTGTaGAACAATCATCTTATAACT +
Preference number: 2 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLVVRLL*NNHLIT
Trigger: AGTTATAAGATGATTGTTTCACAGAAGCCTTACCAC...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR GCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGTGTAACAGGTTTTTCTaGTTTTGTCCAGTAACCTAT +
Preference number: 2 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLCNRFF*FCPVTY
Trigger: ATAGGTTACTGGACAAAAGCAGAAAAACCTGTTACA...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 72 bp GTCGGAGACTCGTCCCTGCGGACCGTGGACGGCAGGTaGTGCGGGCGGCCCGTGGCGGGCGGGCACGCTGGG +
Preference number: 3 (lower is better)
Translates to: VGDSSLRTVDGR*CGRPVAGGHAG
Trigger: CCCAGCGTGCCCGCCCGCCACGGGCCGCCCGCAGCACCTGCCGTCCACGGTCCGCAGGGACGAGTCTCCGAC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR CCA 72 bp GTGGCCCGGCAGTCGGAGACTCGTCCCTGCGGACCGTaGACGGCAGGTGCTGCGGGCGGCCCGTGGCGGGCG +
Preference number: 3 (lower is better)
Translates to: VARQSETRPCGP*TAGAAGGPWRA
Trigger: CGCCCGCCACGGGCCGCCCGCAGCACCTGCCGTCCACGGTCCGCAGGGACGAGTCTCCGACTGCCGGGCCAC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR GCA 72 bp GCTTGGGGCTCACGCCAGGGGCCGCTGGCATCAGGGTaGTTCTCTGCGGACAGGGCGGGAAGCCGGCCACGA +
Preference number: 3 (lower is better)
Translates to: AWGSRQGPLASG*FSADRAGSRPR
Trigger: TCGTGGCCGGCTTCCCGCCCTGTCCGCAGAGAAGCACCCTGATGCCAGCGGCCCCTGGCGTGAGCCCCAAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR CCA 72 bp CTGGTAGGACAGGACGGCCGGCTGCCAGGTGGGGTGTaGACTGGAGGTAGCAGGAGCGGCTCAGCCCCACCG +
Preference number: 3 (lower is better)
Translates to: LVGQDGRLPGGV*TGGSRSGSAPP
Trigger: CGGTGGGGCTGAGCCGCTCCTGCTACCTCCAGTCCACACCCCACCTGGCAGCCGGCCGTCCTGTCCTACCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR CCA 72 bp CTGAGAGGGGAGCCGGGGCCAATCGAGGCAGGAGTGTaGCTGGTAGGACAGGACGGCCGGCTGCCAGGTGGG +
Preference number: 3 (lower is better)
Translates to: LRGEPGPIEAGV*LVGQDGRLPGG
Trigger: CCCACCTGGCAGCCGGCCGTCCTGTCCTACCAGCCACACTCCTGCCTCGATTGGCCCCGGCTCCCCTCTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR-3UTR CAA 90 bp CTGGACGGCGGGGGCCTCTCCGGCCGGCTGCGGGAGTCCGAGGTGACAGTGGCCTCCAGGACTTTGGTGTaGGAGAGGATGGCCTCGTGG +
Preference number: 3 (lower is better)
Translates to: LDGGGLSGRLRESEVTVASRTLV*ERMASW
Trigger: CCACGAGGCCATCCTCTCCAACACCAAAGTCCTGGA...GGCCACTGTCACCTCGGACTCCCGCAGCCGGCCGGAGAGGCCCCCGCCGTCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CAA 90 bp TGCGTGGCCACTGGCCTGGGCACGTCCTGGACGGCGGGGGCCTCTCCGGCCGGCACCAGAGAATTCGGCTaGCACAGGTCCCGGTCAGTT +
Preference number: 3 (lower is better)
Translates to: CVATGLGTSWTAGASPAGTREFG*HRSRSV
Trigger: AACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGT...GCCGGCCGGAGAGGCCCCCGCCGTCCAGGACGTGCCCAGGCCAGTGGCCACGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR CCA 72 bp CCGGCTGCGGGAGTCCGAGGTGACAGTGGCCCGGGCTaGCAACGCCCTTGGTGTAGGCAGCGGGAGAAAGGT +
Preference number: 3 (lower is better)
Translates to: PAAGVRGDSGPG*QRPWCRQREKG
Trigger: ACCTTTCTCCCGCTGCCTACACCAAGGGCGTTGCCAGCCCGGGCCACTGTCACCTCGGACTCCCGCAGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR CCA 72 bp AAGGTCGTGGAGCTTGGGGCTCACGCCAGGGGCCGCTaGCATCAGGGTGCTTCTCTGCGGACAGGGCGGGAA +
Preference number: 3 (lower is better)
Translates to: KVVELGAHARGR*HQGASLRTGRE
Trigger: TTCCCGCCCTGTCCGCAGAGAAGCACCCTGATGCCAGCGGCCCCTGGCGTGAGCCCCAAGCTCCACGACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR CCA 72 bp GGGAACCTGGCCTGCGTTGAGCCATGCTGGAGCAGATaGGGGGTGGAGGGTGCAGCCGAGACACTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: GNLACVEPCWSR*GVEGAAETLGR
Trigger: CCTGCCCAGTGTCTCGGCTGCACCCTCCACCCCCCATCTGCTCCAGCATGGCTCAACGCAGGCCAGGTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR-3UTR CAA 90 bp GGTCTTGGGAGAGGACTTAACCCCTGGCTCACCGGTCCACAGGTTGGAGCAGGCCGTGCGGCCGCTGGGTaGCGGGACGTGAACGCGGAA +
Preference number: 3 (lower is better)
Translates to: GLGRGLNPWLTGPQVGAGRAAAG*RDVNAE
Trigger: TTCCGCGTTCACGTCCCGCAACCCAGCGGCCGCACG...GCCTGCTCCAACCTGTGGACCGGTGAGCCAGGGGTTAAGTCCTCTCCCAAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CAA 90 bp CTGGACGGCGGGGGCCTCTCCGGCCGGCTGCGGGAGTCCGAGGTGACAGTGGCCTCCACGAAAATGACCTaGGAGTCCTGCAGGAAGTTG +
Preference number: 3 (lower is better)
Translates to: LDGGGLSGRLRESEVTVASTKMT*ESCRKL
Trigger: CAACTTCCTGCAGGACTCCAAGGTCATTTTCGTGGA...GGCCACTGTCACCTCGGACTCCCGCAGCCGGCCGGAGAGGCCCCCGCCGTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CAA 90 bp GGCCCGGCAGTCGGAGACTCGTCCCTGCGGACCGTGGACGGCAGGTGCTGCGGGGGCTGTAGTATGGTCTaGGGAGAGGACTTAACCCCT +
Preference number: 3 (lower is better)
Translates to: GPAVGDSSLRTVDGRCCGGCSMV*GEDLTP
Trigger: AGGGGTTAAGTCCTCTCCCAAGACCATACTACAGCC...CCCGCAGCACCTGCCGTCCACGGTCCGCAGGGACGAGTCTCCGACTGCCGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR TCA 72 bp TGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATaGAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAG +
Preference number: 3 (lower is better)
Translates to: WAWGQTACGPFP*KAPARWVSRAQ
Trigger: CTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 72 bp CTGAGAAAGGCTGCACGTGACTCCTACAGTGCCGGGTaGAGGGTACCCAGCCGCAGGTGGGACGCGGCCACA +
Preference number: 3 (lower is better)
Translates to: LRKAARDSYSAG*RVPSRRWDAAT
Trigger: TGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGCCTTTCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 72 bp GGGGTGGAGGGTGCAGCCGAGACACTGGGCAGGGGGTaGAGGAGAGATGTCCACGCTGGGCACAATGCTGAG +
Preference number: 3 (lower is better)
Translates to: GVEGAAETLGRG*RRDVHAGHNAE
Trigger: CTCAGCATTGTGCCCAGCGTGGACATCTCTCCTGCACCCCCTGCCCAGTGTCTCGGCTGCACCCTCCACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR CCA 72 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTaGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGT +
Preference number: 3 (lower is better)
Translates to: VPEGLGVGSNCV*AVPMKGPCTVG
Trigger: ACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CCA 72 bp TCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTaGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGG +
Preference number: 3 (lower is better)
Translates to: SEAAMDASKSSD*SPRRRFQNGCR
Trigger: CCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CCA 72 bp TCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTaGGACGCGGCCACACGTCTTCACGGTTACGTGCAG +
Preference number: 3 (lower is better)
Translates to: SYSAGCRVPSRR*DAATRLHGYVQ
Trigger: CTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CCA 72 bp GTCCGAGGTGACAGTGGCCCGGGCTGGCAACGCCCTTaGTGTAGGCAGCGGGAGAAAGGTCGTGGAGCTTGG +
Preference number: 3 (lower is better)
Translates to: VRGDSGPGWQRP*CRQREKGRGAW
Trigger: CCAAGCTCCACGACCTTTCTCCCGCTGCCTACACCAAGGGCGTTGCCAGCCCGGGCCACTGTCACCTCGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CAA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCAAGGCACTTCCAGTATaGAACCCCAGGGGTGCCAGA +
Preference number: 3 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAAKALPV*NPRGAR
Trigger: TCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCTT...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR TCA 72 bp CGTGCGGGCGCAGCAGGCGGTCGTCCGCCGTCCCAATaGAAAGCTGCAGCATCAGCGGCTCATTCTCCAAGT +
Preference number: 3 (lower is better)
Translates to: RAGAAGGRPPSQ*KAAASAAHSPS
Trigger: ACTTGGAGAATGAGCCGCTGATGCTGCAGCTTTTCATTGGGACGGCGGACGACCGCCTGCTGCGCCCGCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR GCA 72 bp GTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTaGTCAGCCCGGCCACCTCCCTTCTGTTGTCATGAG +
Preference number: 3 (lower is better)
Translates to: VPMKGPCTVGLP*SARPPPFCCHE
Trigger: CTCATGACAACAGAAGGGAGGTGGCCGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 72 bp GGCAGGCAGGTTGAGGAGAAGGTGCCCCAGCCTGGATaGCCGTGGTCCCAGGAGATGAAGTTACCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: GRQVEEKVPQPG*PWSQEMKLPLE
Trigger: CTCCAGGGGTAACTTCATCTCCTGGGACCACGGGCATCCAGGCTGGGGCACCTTCTCCTCAACCTGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR CCA 72 bp AGGGGCCAAATTAGGACTACCGTCCTCATGCACCTCTaGCAGCAGCCGTGGCCCGGCAGTCGGAGACTCGTC +
Preference number: 3 (lower is better)
Translates to: RGQIRTTVLMHL*QQPWPGSRRLV
Trigger: GACGAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGACGGTAGTCCTAATTTGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR CCA 72 bp GGGCTGGTGGGGCTGGTCAGTGTGCTTGTGGGGACCTaGGATGGTCACCCAGGGACTATGGTGCTACGTCCA +
Preference number: 3 (lower is better)
Translates to: GLVGLVSVLVGT*DGHPGTMVLRP
Trigger: TGGACGTAGCACCATAGTCCCTGGGTGACCATCCCAGGTCCCCACAAGCACACTGACCAGCCCCACCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR-3UTR CAA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACCTGGCATTCAGTCAGTaGGAGGTTCTGAGTGGTACC +
Preference number: 3 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDLAFSQ*EVLSGT
Trigger: GGTACCACTCAGAACCTCCAACTGACTGAATGCCAG...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTAACGGATGCCGGTTATaGCTGACAGGGAAGCCCTCC +
Preference number: 3 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLNGCRL*LTGKPS
Trigger: GGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTT...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTACACAAGAGACGCGATaGTGCCGGAGCGCACGGTAC +
Preference number: 3 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGTQETR*CRSARY
Trigger: GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGT...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GGCCCAGCGTCAACACTGGGGATCTCGCCCTGCGGCAGCCTGGGGGCTCTGCCTAGGCCTTTCCAGAGCTaGCCTGATAAAAACAAGGAG +
Preference number: 3 (lower is better)
Translates to: GPASTLGISPCGSLGALPRPFQS*PDKNKE
Trigger: CTCCTTGTTTTTATCAGGCAAGCTCTGGAAAGGCCT...AGGCAGAGCCCCCAGGCTGCCGCAGGGCGAGATCCCCAGTGTTGACGCTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR TCA 72 bp CCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTaGCAGGGAAGCCCTCCTGGGCGAGGACACGTCGGC +
Preference number: 3 (lower is better)
Translates to: PDAGSKTDAGYC*QGSPPGRGHVG
Trigger: GCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 72 bp AGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATaGCGGTTATTGCTGACAGGGAAGCCCTCCTGGGCG +
Preference number: 3 (lower is better)
Translates to: SDWSPRRRFQNG*RLLLTGKPSWA
Trigger: CGCCCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 72 bp TCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATaGACGGCCGTCCGAGGCGGCGATGGACGCCAGCAA +
Preference number: 3 (lower is better)
Translates to: SRVLLELRETRK*TAVRGGDGRQQ
Trigger: TTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp CGAGGTGACAGTGGCCCGGGCTGGCAACGCCCTTGGTGTAGGCAGCGGGAGAAATCACCGGTCCACAGGTaGGAGCAGGCTCATAATCAT +
Preference number: 3 (lower is better)
Translates to: RGDSGPGWQRPWCRQREKSPVHR*EQAHNH
Trigger: ATGATTATGAGCCTGCTCCAACCTGTGGACCGGTGA...TTTCTCCCGCTGCCTACACCAAGGGCGTTGCCAGCCCGGGCCACTGTCACCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR TCA 72 bp CGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTaGCTTCACAGCCGGAGCCTCCACCCGCAGGTGCAA +
Preference number: 3 (lower is better)
Translates to: REPFLHQRRSVQ*LHSRSLHPQVQ
Trigger: TTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 72 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTaGGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTC +
Preference number: 3 (lower is better)
Translates to: DCAGAHGTGRSF*GSPFSISDVLF
Trigger: GAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 72 bp ACAGGAATAGGGGCCAAATTAGGACTACCGTCCTCATaGACCTCTGGCAGCAGCCGTGGCCCGGCAGTCGGA +
Preference number: 3 (lower is better)
Translates to: TGIGAKLGLPSS*TSGSSRGPAVG
Trigger: TCCGACTGCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGACGGTAGTCCTAATTTGGCCCCTATTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR GCA 72 bp ATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTaGGTGAGACGAGAAAATGCACGGCCGTCCGAGGCG +
Preference number: 3 (lower is better)
Translates to: ITAPGFLGSSSN*VRRENARPSEA
Trigger: CGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 72 bp GCAGGTGGGACGCGGCCACACGTCTTCACGGTTACGTaGAGACCGACGGGATGGCCTTCAGGTTGTTTCTTT +
Preference number: 3 (lower is better)
Translates to: AGGTRPHVFTVT*RPTGWPSGCFF
Trigger: AAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CCA 72 bp CAGGTTGAGGAGAAGGTGCCCCAGCCTGGATGCCCGTaGTCCCAGGAGATGAAGTTACCCCTGGAGAAGTGT +
Preference number: 3 (lower is better)
Translates to: QVEEKVPQPGCP*SQEMKLPLEKC
Trigger: ACACTTCTCCAGGGGTAACTTCATCTCCTGGGACCACGGGCATCCAGGCTGGGGCACCTTCTCCTCAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR-3UTR CAA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATCTGGCATTCAGTCAGTaGGAGGTTCTGAGTGGTACC +
Preference number: 3 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHLAFSQ*EVLSGT
Trigger: GGTACCACTCAGAACCTCCAACTGACTGAATGCCAG...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGCAGGTTTTTCTGCTTTaGTCCAGTAACCTATTGATG +
Preference number: 3 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTQVFLL*SSNLLM
Trigger: CATCAATAGGTTACTGGACAAAAGCAGAAAAACCTG...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCAACGGATGCCGGTTATaGCTGACAGGGAAGCCCTCC +
Preference number: 3 (lower is better)
Translates to: GSPFSISDVLFSDFTAGANGCRL*LTGKPS
Trigger: GGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTT...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTTCCCTGCTTTCCTTCTaGTTGGAGAGCCAATCTTTG +
Preference number: 3 (lower is better)
Translates to: AIVPERTVQAVPSAGALSSLLSF*LESQSL
Trigger: CAAAGATTGGCTCTCCAACAAGAAGGAAAGCAGGGA...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGTTGTCCAGTAACCTATaGATGTGCTATTCAAGTTAC +
Preference number: 3 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTLSSNL*MCYSSY
Trigger: GTAACTTGAATAGCACATCAATAGGTTACTGGACAA...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp ACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGAACGGATGCCGGTTATaGCTGACAGGGAAGCCCTCC +
Preference number: 3 (lower is better)
Translates to: TFCSVTSQPEPPPAGAIQNGCRL*LTGKPS
Trigger: GGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTT...CTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR TCA 72 bp CGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTaGGACACAAGAGACGCGATTGTGCCGGAGCGCACG +
Preference number: 3 (lower is better)
Translates to: RRDGLQVVSFRE*DTRDAIVPERT
Trigger: CGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 72 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTaGCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGG +
Preference number: 3 (lower is better)
Translates to: FLSVSETQETRL*RSARYRPFLLR
Trigger: CCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCCTGGCATTCAGTCAGTaGGAGGTTCTGAGTGGTACC +
Preference number: 3 (lower is better)
Translates to: GSPFSISDVLFSDFTAGALAFSQ*EVLSGT
Trigger: GGTACCACTCAGAACCTCCAACTGACTGAATGCCAG...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAACTGCTTTCCTTCTTGTaGGAGAGCCAATCTTTGCAC +
Preference number: 3 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKLLSFL*ESQSLH
Trigger: GTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCAG...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp CTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAAAGGCACTTCCAGTATaGAACCCCAGGGGTGCCAGA +
Preference number: 3 (lower is better)
Translates to: LEPQTQVPKRMPVIADREKALPV*NPRGAR
Trigger: TCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCTT...TTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGGAAACGTTCCAAATGTaGGAGACTCATACTAGAGTC +
Preference number: 3 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLEETFQM*ETHTRV
Trigger: GACTCTAGTATGAGTCTCCAACATTTGGAACGTTTC...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGGAAACGTTCCAAATGTaGGAGACTCATACTAGAGTC +
Preference number: 3 (lower is better)
Translates to: ENARPSEAAMDASKSSDWETFQM*ETHTRV
Trigger: GACTCTAGTATGAGTCTCCAACATTTGGAACGTTTC...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR TCA 72 bp AGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTaGGTGAGACACAAGAGACGCGATTGTGCCGGAGCG +
Preference number: 3 (lower is better)
Translates to: RPTGWPSGCFFP*VRHKRRDCAGA
Trigger: CGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CCA 72 bp AGTCAGCATACCCCTGCTGAACTGAGTGCTCCAATGTaGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTC +
Preference number: 3 (lower is better)
Translates to: SQHTPAELSAPM*QLGVGARAGEV
Trigger: GACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGAGCACTCAGTTCAGCAGGGGTATGCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
ENST00000590313.5
3UTR-3UTR CAA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCTTGGAGAGCCAATCTTaGCACATATTAATGTTCAGC +
Preference number: 3 (lower is better)
Translates to: RDAIVPERTVQAVPSAGALESQS*HILMFS
Trigger: GCTGAACATTAATATGTGCAAAGATTGGCTCTCCAA...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTCTGCTTTCCTTCTTGTaGGAGAGCCAATCTTTGCAC +
Preference number: 3 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSLLSFL*ESQSLH
Trigger: GTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCAG...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTAAGGCACTTCCAGTATaGAACCCCAGGGGTGCCAGA +
Preference number: 3 (lower is better)
Translates to: GASTRRCNSGRFHKGALIKALPV*NPRGAR
Trigger: TCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCTT...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCTGCTATTCAAGTTACTaGTGCTATGTTCGAAGCCAG +
Preference number: 3 (lower is better)
Translates to: RLCRSARYRPFLLREPFLCYSSY*CYVRSQ
Trigger: CTGGCTTCGAACATAGCACAAGTAACTTGAATAGCA...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp TCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTTGGAGAGCCAATCTTaGCACATATTAATGTTCAGC +
Preference number: 3 (lower is better)
Translates to: SNCVWAVPMKGPCTVGLPLESQS*HILMFS
Trigger: GCTGAACATTAATATGTGCAAAGATTGGCTCTCCAA...CGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGAAGGCACTTCCAGTATaGAACCCCAGGGGTGCCAGA +
Preference number: 3 (lower is better)
Translates to: PTATVNHSSWLSRVLLELKALPV*NPRGAR
Trigger: TCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCTT...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCACAATGAAATGTGTTaGCAGTTTCTGCTCCTAAAA +
Preference number: 3 (lower is better)
Translates to: RDAIVPERTVQAVPSAGAHNEMC*QFLLLK
Trigger: TTTTAGGAGCAGAAACTGCAAACACATTTCATTGTG...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGAAACGTTCCAAATGTaGGAGACTCATACTAGAGTC +
Preference number: 3 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVETFQM*ETHTRV
Trigger: GACTCTAGTATGAGTCTCCAACATTTGGAACGTTTC...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTTTTCTGCTTTaGTCCAGTAACCTATTGATG +
Preference number: 3 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLQVFLL*SSNLLM
Trigger: CATCAATAGGTTACTGGACAAAAGCAGAAAAACCTG...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 72 bp TTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTaGAATTCAGGCAGGTTCCATAAGGGGGCATTAATT +
Preference number: 3 (lower is better)
Translates to: FSDFTAGASTRR*NSGRFHKGALI
Trigger: AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CCA 72 bp GACGTGAACGGGGCTGGTTATCCTCTGATTCCGAAATaGCGGGATCTCAACCACCAGAGAATTCGGCTTGCA +
Preference number: 3 (lower is better)
Translates to: DVNGAGYPLIPK*RDLNHQRIRLA
Trigger: TGCAAGCCGAATTCTCTGGTGGTTGAGATCCCGCCATTTCGGAATCAGAGGATAACCAGCCCCGTTCACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CAA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCACTGGCATTCAGTCAGTaGGAGGTTCTGAGTGGTACC +
Preference number: 3 (lower is better)
Translates to: TAPGFLGSSSNCVRRENALAFSQ*EVLSGT
Trigger: GGTACCACTCAGAACCTCCAACTGACTGAATGCCAG...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAATTGGAGAGCCAATCTTaGCACATATTAATGTTCAGC +
Preference number: 3 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKLESQS*HILMFS
Trigger: GCTGAACATTAATATGTGCAAAGATTGGCTCTCCAA...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTTTGGAGAGCCAATCTTaGCACATATTAATGTTCAGC +
Preference number: 3 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVLESQS*HILMFS
Trigger: GCTGAACATTAATATGTGCAAAGATTGGCTCTCCAA...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGCTTTCCTTCTTGTaGGAGAGCCAATCTTTGCAC +
Preference number: 3 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLLLSFL*ESQSLH
Trigger: GTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCAG...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp CTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAACTGCTTTCCTTCTTGTaGGAGAGCCAATCTTTGCAC +
Preference number: 3 (lower is better)
Translates to: LEPQTQVPKRMPVIADRELLSFL*ESQSLH
Trigger: GTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCAG...TTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTCCCTGCTTTCCTTCTaGTTGGAGAGCCAATCTTTG +
Preference number: 3 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFSLLSF*LESQSL
Trigger: CAAAGATTGGCTCTCCAACAAGAAGGAAAGCAGGGA...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCACAATGAAATGTGTTaGCAGTTTCTGCTCCTAAAA +
Preference number: 3 (lower is better)
Translates to: RLCRSARYRPFLLREPFLHNEMC*QFLLLK
Trigger: TTTTAGGAGCAGAAACTGCAAACACATTTCATTGTG...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCTTGTCCAGTAACCTATaGATGTGCTATTCAAGTTAC +
Preference number: 3 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSLSSNL*MCYSSY
Trigger: GTAACTTGAATAGCACATCAATAGGTTACTGGACAA...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTAGGGATCTCCAGGACTTaGGTGTTGGAGAGGATGGCC +
Preference number: 3 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLGISRT*VLERMA
Trigger: GGCCATCCTCTCCAACACCAAAGTCCTGGAGATCCC...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR CCA 72 bp AACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTaGGCGAGGACACGTCGGCTCTGTTATTATTTATAC +
Preference number: 3 (lower is better)
Translates to: NGCRLLLTGKPS*ARTRRLCYYLY
Trigger: GTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTACTGCTTTCCTTCTTGTaGGAGAGCCAATCTTTGCAC +
Preference number: 3 (lower is better)
Translates to: VIADREALLGEDTSALLLLLSFL*ESQSLH
Trigger: GTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCAG...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTGCTATTCAAGTTACTaGTGCTATGTTCGAAGCCAG +
Preference number: 3 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPCYSSY*CYVRSQ
Trigger: CTGGCTTCGAACATAGCACAAGTAACTTGAATAGCA...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTTTGTCCAGTAACCTATaGATGTGCTATTCAAGTTAC +
Preference number: 3 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVLSSNL*MCYSSY
Trigger: GTAACTTGAATAGCACATCAATAGGTTACTGGACAA...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCACAGGTTTTTCTGCTTTaGTCCAGTAACCTATTGATG +
Preference number: 3 (lower is better)
Translates to: SATFCSVTSQPEPPPAGAQVFLL*SSNLLM
Trigger: CATCAATAGGTTACTGGACAAAAGCAGAAAAACCTG...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTACTGGCATTCAGTCAGTaGGAGGTTCTGAGTGGTACC +
Preference number: 3 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLLAFSQ*EVLSGT
Trigger: GGTACCACTCAGAACCTCCAACTGACTGAATGCCAG...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
ENST00000590313.5
3UTR-3UTR CAA 90 bp TACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACATCCCTGCTTTCCTTCTaGTTGGAGAGCCAATCTTTG +
Preference number: 3 (lower is better)
Translates to: YVQTDGMAFRLFLSVSETSLLSF*LESQSL
Trigger: CAAAGATTGGCTCTCCAACAAGAAGGAAAGCAGGGA...TGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTGAAACGTTCCAAATGTaGGAGACTCATACTAGAGTC +
Preference number: 3 (lower is better)
Translates to: GALSPSATFCSVTSQPEPETFQM*ETHTRV
Trigger: GACTCTAGTATGAGTCTCCAACATTTGGAACGTTTC...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCCAGGTTTTTCTGCTTTaGTCCAGTAACCTATTGATG +
Preference number: 3 (lower is better)
Translates to: GSPFSISDVLFSDFTAGAQVFLL*SSNLLM
Trigger: CATCAATAGGTTACTGGACAAAAGCAGAAAAACCTG...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCAACGGATGCCGGTTATaGCTGACAGGGAAGCCCTCC +
Preference number: 3 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTNGCRL*LTGKPS
Trigger: GGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTT...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCAATCACTTTCTAATGTaGCCGTCTGGTAACCTACAG +
Preference number: 3 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFNHFLM*PSGNLQ
Trigger: CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATT...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCGTGGCGTTTTTGGTATaGGTTTTCTTAGATGAAGCA +
Preference number: 3 (lower is better)
Translates to: GSPFSISDVLFSDFTAGAVAFLV*VFLDEA
Trigger: TGCTTCATCTAAGAAAACCAATACCAAAAACGCCAC...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR TCA 72 bp CAGACATCAAACGTTTCCTTTTCAATGACAGTCCCCTaGGAAAGGCTGCACGTGACTCCTACAGTGCCGGGT +
Preference number: 3 (lower is better)
Translates to: QTSNVSFSMTVP*ERLHVTPTVPG
Trigger: ACCCGGCACTGTAGGAGTCACGTGCAGCCTTTCTCAGGGGACTGTCATTGAAAAGGAAACGTTTGATGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTCCCTGCTTTCCTTCTaGTTGGAGAGCCAATCTTTG +
Preference number: 3 (lower is better)
Translates to: GMAFRLFLSVSETQETRLSLLSF*LESQSL
Trigger: CAAAGATTGGCTCTCCAACAAGAAGGAAAGCAGGGA...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTAGAAACGTTCCAAATGTaGGAGACTCATACTAGAGTC +
Preference number: 3 (lower is better)
Translates to: VIADREALLGEDTSALLLETFQM*ETHTRV
Trigger: GACTCTAGTATGAGTCTCCAACATTTGGAACGTTTC...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp ACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGTGGCGTTTTTGGTATaGGTTTTCTTAGATGAAGCA +
Preference number: 3 (lower is better)
Translates to: TFCSVTSQPEPPPAGAIQVAFLV*VFLDEA
Trigger: TGCTTCATCTAAGAAAACCAATACCAAAAACGCCAC...CTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTACTGCTTTCCTTCTTGTaGGAGAGCCAATCTTTGCAC +
Preference number: 3 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLLLSFL*ESQSLH
Trigger: GTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCAG...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
3UTR-3UTR CAA 90 bp GCAGGAGTGTACGTGACAGCCCAGGAAACGTTCCAAATGTTGGAGACTCATACTTCCCTGCTTTCCTTCTaGTTGGAGAGCCAATCTTTG +
Preference number: 3 (lower is better)
Translates to: AGVYVTAQETFQMLETHTSLLSF*LESQSL
Trigger: CAAAGATTGGCTCTCCAACAAGAAGGAAAGCAGGGA...AGTATGAGTCTCCAACATTTGGAACGTTTCCTGGGCTGTCACGTACACTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCACAATGAAATGTGTTaGCAGTTTCTGCTCCTAAAA +
Preference number: 3 (lower is better)
Translates to: GALSPSATFCSVTSQPEPHNEMC*QFLLLK
Trigger: TTTTAGGAGCAGAAACTGCAAACACATTTCATTGTG...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCTGCTATTCAAGTTACTaGTGCTATGTTCGAAGCCAG +
Preference number: 3 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFCYSSY*CYVRSQ
Trigger: CTGGCTTCGAACATAGCACAAGTAACTTGAATAGCA...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp TACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACATGCTATTCAAGTTACTaGTGCTATGTTCGAAGCCAG +
Preference number: 3 (lower is better)
Translates to: YVQTDGMAFRLFLSVSETCYSSY*CYVRSQ
Trigger: CTGGCTTCGAACATAGCACAAGTAACTTGAATAGCA...TGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTGTGGCGTTTTTGGTATaGGTTTTCTTAGATGAAGCA +
Preference number: 3 (lower is better)
Translates to: GASTRRCNSGRFHKGALIVAFLV*VFLDEA
Trigger: TGCTTCATCTAAGAAAACCAATACCAAAAACGCCAC...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGGAGCATTCGATGGGGTaGGAGGCCACCTGCAGGGAC +
Preference number: 3 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLEHSMG*EATCRD
Trigger: GTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCTC...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR TCA 72 bp AGCCAGATTAAAAACAAAGATGCGAGCATGCGACTATaGACAAGCCTACGGTTTCAACCGCGCAGACAAGGG +
Preference number: 3 (lower is better)
Translates to: SQIKNKDASMRL*TSLRFQPRRQG
Trigger: CCCTTGTCTGCGCGGTTGAAACCGTAGGCTTGTTCATAGTCGCATGCTCGCATCTTTGTTTTTAATCTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATTGCTATTCAAGTTACTaGTGCTATGTTCGAAGCCAG +
Preference number: 3 (lower is better)
Translates to: DREALLGEDTSALLLFIHCYSSY*CYVRSQ
Trigger: CTGGCTTCGAACATAGCACAAGTAACTTGAATAGCA...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGAACGGATGCCGGTTATaGCTGACAGGGAAGCCCTCC +
Preference number: 3 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLNGCRL*LTGKPS
Trigger: GGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTT...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGGAGTCCTGCAGGAAGTaGTGGCCAGACAGGACCATC +
Preference number: 3 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLESCRK*WPDRTI
Trigger: GATGGTCCTGTCTGGCCACAACTTCCTGCAGGACTC...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR GCA 72 bp GAGTGCTCCAATGTGGCAACTAGGAGTGGGTGCTCGTaGTGGAGAGGTCATTTCGTATTATTTCATTTACGT +
Preference number: 3 (lower is better)
Translates to: ECSNVATRSGCS*WRGHFVLFHLR
Trigger: ACGTAAATGAAATAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGAGCACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CAA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGCACAATGAAATGTGTTaGCAGTTTCTGCTCCTAAAA +
Preference number: 3 (lower is better)
Translates to: GMAFRLFLSVSETQETRLHNEMC*QFLLLK
Trigger: TTTTAGGAGCAGAAACTGCAAACACATTTCATTGTG...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTTGTCCAGTAACCTATaGATGTGCTATTCAAGTTAC +
Preference number: 3 (lower is better)
Translates to: GMAFRLFLSVSETQETRLLSSNL*MCYSSY
Trigger: GTAACTTGAATAGCACATCAATAGGTTACTGGACAA...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR GCA 72 bp ATGTTCGAAGCCAGATTAAAAACAAAGATGCGAGCATaGGACTATGAACAAGCCTACGGTTTCAACCGCGCA +
Preference number: 3 (lower is better)
Translates to: MFEARLKTKMRA*DYEQAYGFNRA
Trigger: TGCGCGGTTGAAACCGTAGGCTTGTTCATAGTCGCATGCTCGCATCTTTGTTTTTAATCTGGCTTCGAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CCA 72 bp TGCTCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTaGAGAGGTCATTTCGTATTATTTCATTTACGTCAT +
Preference number: 3 (lower is better)
Translates to: CSNVATRSGCSC*RGHFVLFHLRH
Trigger: ATGACGTAAATGAAATAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CAA 90 bp AAAGGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTGACCCCCTCAGTTTTTaGGAGCAGAAGAGCCATGTT +
Preference number: 3 (lower is better)
Translates to: KGACKIAIPICLFTVSSFDPLSF*EQKSHV
Trigger: AACATGGCTCTTCTGCTCCAAAAAACTGAGGGGGTC...AAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
3UTR TCA 72 bp AACCGCGCAGACAAGGGAAGCATGTTACAAAAGAGCTaGGATGACAGACTGGAAGATTCTAAAATGCACTGT +
Preference number: 3 (lower is better)
Translates to: NRADKGSMLQKS*DDRLEDSKMHC
Trigger: ACAGTGCATTTTAGAATCTTCCAGTCTGTCATCTCAGCTCTTTTGTAACATGCTTCCCTTGTCTGCGCGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCTTGGAGAGCCAATCTTaGCACATATTAATGTTCAGC +
Preference number: 3 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTLESQS*HILMFS
Trigger: GCTGAACATTAATATGTGCAAAGATTGGCTCTCCAA...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CCA 72 bp TTTCGTATTATTTCATTTACGTCATCCAGGTACAACTaGTCCAACTCTTCAGGCTCTCGCTTGACCGTTACA +
Preference number: 3 (lower is better)
Translates to: FRIISFTSSRYN*SNSSGSRLTVT
Trigger: TGTAACGGTCAAGCGAGAGCCTGAAGAGTTGGACCAGTTGTACCTGGATGACGTAAATGAAATAATACGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
3UTR-3UTR CAA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCGAAACGTTCCAAATGTaGGAGACTCATACTAGAGTC +
Preference number: 3 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCETFQM*ETHTRV
Trigger: GACTCTAGTATGAGTCTCCAACATTTGGAACGTTTC...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACTTGTCCAGTAACCTATaGATGTGCTATTCAAGTTAC +
Preference number: 3 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHLSSNL*MCYSSY
Trigger: GTAACTTGAATAGCACATCAATAGGTTACTGGACAA...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCAATCACTTTCTAATGTaGCCGTCTGGTAACCTACAG +
Preference number: 3 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCNHFLM*PSGNLQ
Trigger: CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATT...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR-3UTR CAA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGTTGTCCAGTAACCTATaGATGTGCTATTCAAGTTAC +
Preference number: 3 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLLSSNL*MCYSSY
Trigger: GTAACTTGAATAGCACATCAATAGGTTACTGGACAA...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TGCGTGGCCACTGGCCTGGGCACGTCCTGGACGGCGGGGGCCTCTCCGGCCGGCTGCGGGAGTCCGAGGTaGCAGTGGCCCGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: CVATGLGTSWTAGASPAGCGSPR*QWPGLA
Trigger: TGCCAGCCCGGGCCACTGTCACCTCGGACTCCCGCA...GCCGGCCGGAGAGGCCCCCGCCGTCCAGGACGTGCCCAGGCCAGTGGCCACGCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp CTGGACGGCGGGGGCCTCTCCGGCCGGCTGCGGGAGTCCGAGGTGACAGTGGCCGTCCTCATGCACCTCTaGCAGCAGCCGTGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: LDGGGLSGRLRESEVTVAVLMHL*QQPWPG
Trigger: GCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGAC...GGCCACTGTCACCTCGGACTCCCGCAGCCGGCCGGAGAGGCCCCCGCCGTCCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGCGTCCCTGCGGACCGTaGACGGCAGGTGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTRPCGP*TAGAAG
Trigger: GCCCGCAGCACCTGCCGTCCACGGTCCGCAGGGACG...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAGCCCGGCCAGCTCTCCTCAGTaGCGCTGGCGCGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: VGRSHERPLHGGSPVLSPASSPQ*RWRGAR
Trigger: CCTCGCCCCGCGCCAGCGTCACTGAGGAGAGCTGGC...CGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCCGACGGGCTCCACCTTaGGCGCCACTGAGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAARRAPP*APLRAA
Trigger: AGCCGCCCTCAGTGGCGCTCAAGGTGGAGCCCGTCG...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGTGCGGGAGTCCGAGGTaGCAGTGGCCCGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTCGSPR*QWPGLA
Trigger: TGCCAGCCCGGGCCACTGTCACCTCGGACTCCCGCA...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGGGAGGCGCACTCACCTaGTGTGGCAGCAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTGGALT*CGSRAG
Trigger: CCCGGCCCTGCTGCCACAGCAGGTGAGTGCGCCTCC...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CGGCCGGCTGCGGGAGTCCGAGGTGACAGTGGCCCGGGCTGGCAACGCCCTTGGCATGCAGCTGCACGATaGGGTGTCCTCCGGCCGACG +
Preference number: 4 (lower is better)
Translates to: RPAAGVRGDSGPGWQRPWHAAAR*GVLRPT
Trigger: CGTCGGCCGGAGGACACCCCATCGTGCAGCTGCATG...CCAAGGGCGTTGCCAGCCCGGGCCACTGTCACCTCGGACTCCCGCAGCCGGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp GGCCCGGCAGTCGGAGACTCGTCCCTGCGGACCGTGGACGGCAGGTGCTGCGGGGACAGTGGCCCGGGCTaGCAACGCCCTTGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GPAVGDSSLRTVDGRCCGDSGPG*QRPWCR
Trigger: CCTACACCAAGGGCGTTGCCAGCCCGGGCCACTGTC...CCCGCAGCACCTGCCGTCCACGGTCCGCAGGGACGAGTCTCCGACTGCCGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCGGGGTGCGTGGCCACTaGCCTGGGCACGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAAGVRGH*PGHVLD
Trigger: GTCCAGGACGTGCCCAGGCCAGTGGCCACGCACCCC...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CTGGACGGCGGGGGCCTCTCCGGCCGGCTGCGGGAGTCCGAGGTGACAGTGGCCGAGGAGAGGGGCTGCTaGGGCAGAGCGAGTGTTCGA +
Preference number: 4 (lower is better)
Translates to: LDGGGLSGRLRESEVTVAEERGC*GRASVR
Trigger: TCGAACACTCGCTCTGCCCCAGCAGCCCCTCTCCTC...GGCCACTGTCACCTCGGACTCCCGCAGCCGGCCGGAGAGGCCCCCGCCGTCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR GCA 90 bp CCCAGGGGTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCACGGTGGGTCTCCCGTaGTCAGCCCGGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: PRGARRAGRGVKLRVGRSTVGLP*SARPPP
Trigger: GGGAGGTGGCCGGGCTGAGCACGGGAGACCCACCGT...GGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCCCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CTGGACGGCGGGGGCCTCTCCGGCCGGCTGCGGGAGTCCGAGGTGACAGTGGCCGGACTACCGTCCTCATaGACCTCTGGCAGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: LDGGGLSGRLRESEVTVAGLPSS*TSGSSR
Trigger: ACGGCTGCTGCCAGAGGTGCATGAGGACGGTAGTCC...GGCCACTGTCACCTCGGACTCCCGCAGCCGGCCGGAGAGGCCCCCGCCGTCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACCCTGCTGCTGGGATCTaGCGCGGCGACTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDPAAGI*RGDSAG
Trigger: GCCGGCGGAGTCGCCGCGCCAGATCCCAGCAGCAGG...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CCA 90 bp CGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCCCCAGACGCAGGGAGGACAGGCTGCTaGCCGGGCTCAGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: RPRRRWTPARAATGAPDAGRTGC*PGSGTR
Trigger: CCTCGTGCCTGAGCCCGGCCAGCAGCCTGTCCTCCC...TGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGTGGCCACTGGCCTaGGCACGTCCTGGACGGCGG +
Preference number: 4 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDAWPLA*ARPGRR
Trigger: CCGCCGTCCAGGACGTGCCCAGGCCAGTGGCCACGC...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGCTCTGGCAGCAGCCGTaGCCCGGCAGTCGGAGACTC +
Preference number: 4 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTLWQQP*PGSRRL
Trigger: GAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAG...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGGCCAGCTCTCCTCAGTaGCGCTGGCGCGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLASSPQ*RWRGAR
Trigger: CCTCGCCCCGCGCCAGCGTCACTGAGGAGAGCTGGC...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp GGCCCAGCGTCAACACTGGGGATCTCGCCCTGCGGCAGCCTGGGGGCTCTGCCTCTCCCAGGTCCAGGCTaGTGTCGGTGGTCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: GPASTLGISPCGSLGALPLPGPG*CRWSAR
Trigger: ACGCGCTGACCACCGACAGCAGCCTGGACCTGGGAG...AGGCAGAGCCCCCAGGCTGCCGCAGGGCGAGATCCCCAGTGTTGACGCTGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGCCGCTGGCATCAGGGTaGTTCTCTGCGGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTPLASG*FSADRA
Trigger: CGCCCTGTCCGCAGAGAAGCACCCTGATGCCAGCGG...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCTGGGCAGACTCAGCGTaGCCGTGGAGGGGGACCGTT +
Preference number: 4 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAAWADSA*PWRGTV
Trigger: AACGGTCCCCCTCCACGGCCACGCTGAGTCTGCCCA...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGTGCCATGGCGACGTCTaGGGGGACGCGTACGGGTAC +
Preference number: 4 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTCHGDV*GDAYGY
Trigger: GTACCCGTACGCGTCCCCCCAGACGTCGCCATGGCA...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp CGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCCCCAGACGCAAAGGCCCCTGCACGGTaGGTCTCCCGTGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: RPRRRWTPARAATGAPDAKAPAR*VSRAQP
Trigger: GGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTT...TGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAGCCCGATAGCCATAGTGTTCTaGGGCGGCCGCGGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: VGRSHERPLHGGSPVLSPIAIVF*GGRGGA
Trigger: GGCGCCGCCGCGGCCGCCCCAGAACACTATGGCTAT...CGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318065.9
ENST00000329101.8
CDS-3UTR CCA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGAGGTCGGCTCTTGGGTaGCAGGCGGGAGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTRSALG*QAGVEE
Trigger: CTCCTCCACTCCCGCCTGCCACCCAAGAGCCGACCT...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CCCAGGGGTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCTCTGGCAGCAGCCGTaGCCCGGCAGTCGGAGACTC +
Preference number: 4 (lower is better)
Translates to: PRGARRAGRGVKLRVGRSLWQQP*PGSRRL
Trigger: GAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAG...GGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCCCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TGCGTGGCCACTGGCCTGGGCACGTCCTGGACGGCGGGGGCCTCTCCGGCCGGCTGCAGACGTAGAAACTaGCGTGAACGGGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: CVATGLGTSWTAGASPAGCRRRN*RERGWL
Trigger: TAACCAGCCCCGTTCACGTCAGTTTCTACGTCTGCA...GCCGGCCGGAGAGGCCCCCGCCGTCCAGGACGTGCCCAGGCCAGTGGCCACGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR TCA 90 bp TGCGTGGCCACTGGCCTGGGCACGTCCTGGACGGCGGGGGCCTCTCCGGCCGGCGTCAGTTGGAGGTTCTaGGTGGTACCAGGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: CVATGLGTSWTAGASPAGVSWRF*VVPGVS
Trigger: ACTCACACCTGGTACCACTCAGAACCTCCAACTGAC...GCCGGCCGGAGAGGCCCCCGCCGTCCAGGACGTGCCCAGGCCAGTGGCCACGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR GCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCGCGGCCCTAGGACCTaGGCGGTGGCTCCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLRGPRT*AVAPSP
Trigger: AGGGCTCGGAGCCACCGCGCAGGTCCTAGGGCCGCG...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR GCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGTCCGGGAGGACAGGCTaGTGGCCGGGCTCAGGCACG +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLSGRTG*WPGSGT
Trigger: CGTGCCTGAGCCCGGCCAGCAGCCTGTCCTCCCGGA...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGGAGTGGGACGGCAGCTaGCAGTCCAGGGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLEEWDGS*QSRAGR
Trigger: CCTGCCCGCCCTGGACTGGCAGCTGCCGTCCCACTC...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CTGGACGGCGGGGGCCTCTCCGGCCGGCTGCGGGAGTCCGAGGTGACAGTGGCCTGGTGGGACTTGGGCTaGACCTCAATCCGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LDGGGLSGRLRESEVTVAWWDLG*TSIRSS
Trigger: TGAGCTTCGGATTGAGGTGCAGCCCAAGTCCCACCA...GGCCACTGTCACCTCGGACTCCCGCAGCCGGCCGGAGAGGCCCCCGCCGTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR GCA 90 bp CGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCCCCAGACGCATCCTACAGTGCCGGGTaGAGGGTACCCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: RPRRRWTPARAATGAPDASYSAG*RVPSRR
Trigger: CCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGA...TGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCTAGGACCTGCGCGGTaGCTCCGAGCCCTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: AIVPERTVQAVPSAGALSLGPAR*LRALPA
Trigger: CGCGGGCAGGGCTCGGAGCCACCGCGCAGGTCCTAG...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CCA 90 bp CGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCCCCAGACGCAGACTCAGCGTGGCCGTaGAGGGGGACCGTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: RPRRRWTPARAATGAPDADSAWP*RGTVWS
Trigger: GCTCCAAACGGTCCCCCTCCACGGCCACGCTGAGTC...TGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp CGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCCCCAGACGCATGCCATGGCGACGTCTaGGGGGACGCGTACGGGTAC +
Preference number: 4 (lower is better)
Translates to: RPRRRWTPARAATGAPDACHGDV*GDAYGY
Trigger: GTACCCGTACGCGTCCCCCCAGACGTCGCCATGGCA...TGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGCGTGCGGGGACGGCGTaGGCGAGTGGTGGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: ENARPSEAAMDASKSSDWRAGTA*ASGGVS
Trigger: ACTCACCCCACCACTCGCCCACGCCGTCCCCGCACG...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GGGGTGCGTGGCCACTGGCCTGGGCACGTCCTGGACGGCGGGGGCCTCTCCGGCCCTCTGATTCCGAAATaGCGGGATCTCAACCACCAG +
Preference number: 4 (lower is better)
Translates to: GVRGHWPGHVLDGGGLSGPLIPK*RDLNHQ
Trigger: CTGGTGGTTGAGATCCCGCCATTTCGGAATCAGAGG...GCCGGAGAGGCCCCCGCCGTCCAGGACGTGCCCAGGCCAGTGGCCACGCACCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGGAGCTGGGGTCGGGTaGCATCGCGAGCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDGAGVG*HRELLA
Trigger: AGCCAGCAGCTCGCGATGCCACCCGACCCCAGCTCC...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CCCAGGGGTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCACGCCAGGGGCCGCTaGCATCAGGGTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PRGARRAGRGVKLRVGRSHARGR*HQGASL
Trigger: CAGAGAAGCACCCTGATGCCAGCGGCCCCTGGCGTG...GGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTGCGTGGCCACTGGCCTaGGCACGTCCTGGACGGCGG +
Preference number: 4 (lower is better)
Translates to: AIVPERTVQAVPSAGALSAWPLA*ARPGRR
Trigger: CCGCCGTCCAGGACGTGCCCAGGCCAGTGGCCACGC...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGGGGGTGCGTGGCCACTaGCCTGGGCACGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLEGVRGH*PGHVLD
Trigger: GTCCAGGACGTGCCCAGGCCAGTGGCCACGCACCCC...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TGCGTGGCCACTGGCCTGGGCACGTCCTGGACGGCGGGGGCCTCTCCGGCCGGCCTGAGTGCTCCAATGTaGCAACTAGGAGTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: CVATGLGTSWTAGASPAGLSAPM*QLGVGA
Trigger: AGCACCCACTCCTAGTTGCCACATTGGAGCACTCAG...GCCGGCCGGAGAGGCCCCCGCCGTCCAGGACGTGCCCAGGCCAGTGGCCACGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp CCCAGGGGTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCGTACCCAGCCGCAGGTaGGACGCGGCCACACGTCTT +
Preference number: 4 (lower is better)
Translates to: PRGARRAGRGVKLRVGRSVPSRR*DAATRL
Trigger: AAGACGTGTGGCCGCGTCCCACCTGCGGCTGGGTAC...GGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCGGTGGTCAGCGCGTTaGTGGCGGCCACGATGGCCG +
Preference number: 4 (lower is better)
Translates to: QETRLCRSARYRPFLLRERWSAR*WRPRWP
Trigger: CGGCCATCGTGGCCGCCATCAACGCGCTGACCACCG...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCTGGTCTTGCGGGACTTaGCAGGGACGCCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAAWSCGT*QGRHLP
Trigger: TGGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCA...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGCACCTTGAGCGCCACTaGGGGCGGCTGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: ENARPSEAAMDASKSSDWHLERH*GRLLQG
Trigger: ACCCTGGAGCAGCCGCCCTCAGTGGCGCTCAAGGTG...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp GGCCCAGCGTCAACACTGGGGATCTCGCCCTGCGGCAGCCTGGGGGCTCTGCCTAGGCAGCTCCTGAGCTaGGCGCTGGGAGCATTCGAT +
Preference number: 4 (lower is better)
Translates to: GPASTLGISPCGSLGALPRQLLS*ALGAFD
Trigger: ATCGAATGCTCCCAGCGCTCAGCTCAGGAGCTGCCT...AGGCAGAGCCCCCAGGCTGCCGCAGGGCGAGATCCCCAGTGTTGACGCTGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR TCA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTTGCGGGAGTCCGAGGTaGCAGTGGCCCGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: AIVPERTVQAVPSAGALSCGSPR*QWPGLA
Trigger: TGCCAGCCCGGGCCACTGTCACCTCGGACTCCCGCA...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACTGTGGGCCGTTCCCATaGAAGGCCCCTGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDCGPFP*KAPARW
Trigger: CCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACA...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTGGGAACCCAGCAGTGTaGAGGCCCCCAGCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGGNPAV*RPPARG
Trigger: CCCGCGGGCTGGGGGCCTGCACACTGCTGGGTTCCC...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCGAGTGGGACGGCAGCTaGCAGTCCAGGGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RLCRSARYRPFLLREPFLEWDGS*QSRAGR
Trigger: CCTGCCCGCCCTGGACTGGCAGCTGCCGTCCCACTC...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCCCTGCAGGGACAGCGTaGGGCCGCTGGGTTGCGGGA +
Preference number: 4 (lower is better)
Translates to: SNCVRRENARPSEAAMDAPAGTA*GRWVAG
Trigger: TCCCGCAACCCAGCGGCCGCACGCTGTCCCTGCAGG...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCGGGTTGGAGGCCACCTaGAGGGACAGCGTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: RLCRSARYRPFLLREPFLGLEAT*RDSVRP
Trigger: CGGCCGCACGCTGTCCCTGCAGGTGGCCTCCAACCC...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGGGGTTGGAGGCCACCTaGAGGGACAGCGTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: QETRLCRSARYRPFLLREGLEAT*RDSVRP
Trigger: CGGCCGCACGCTGTCCCTGCAGGTGGCCTCCAACCC...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTGGAGGCGCACTCACCTaGTGTGGCAGCAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLGGALT*CGSRAG
Trigger: CCCGGCCCTGCTGCCACAGCAGGTGAGTGCGCCTCC...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATCTAGGACCTGCGCGGTaGCTCCGAGCCCTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHLGPAR*LRALPA
Trigger: CGCGGGCAGGGCTCGGAGCCACCGCGCAGGTCCTAG...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGTGGAAAGCTGGTGCTTaGCATCCGCGCGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLWKAGA*HPRGGG
Trigger: GCCGCCGCCGCGCGGATGCCAAGCACCAGCTTTCCA...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CCA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCTGGAAAGCTGGTGCTTaGCATCCGCGCGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: RDAIVPERTVQAVPSAGAWKAGA*HPRGGG
Trigger: GCCGCCGCCGCGCGGATGCCAAGCACCAGCTTTCCA...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CCA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACTGGGCAGACTCAGCGTaGCCGTGGAGGGGGACCGTT +
Preference number: 4 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDWADSA*PWRGTV
Trigger: AACGGTCCCCCTCCACGGCCACGCTGAGTCTGCCCA...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GAGAACGGGCGAAGGCTGGTGCCCAGGGTGAGCCTGGGGAACCTGGCCTGCGTTTGTAGGCCTCCAGGCTaGGCAGACTCAGCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: ENGRRLVPRVSLGNLACVCRPPG*ADSAWP
Trigger: CGGCCACGCTGAGTCTGCCCAGCCTGGAGGCCTACA...AACGCAGGCCAGGTTCCCCAGGCTCACCCTGGGCACCAGCCTTCGCCCGTTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTGGGAGGACAGGCTGCTaGCCGGGCTCAGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLGRTGC*PGSGTR
Trigger: CCTCGTGCCTGAGCCCGGCCAGCAGCCTGTCCTCCC...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp CGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCCCCAGACGCACGGGGTCCGTGGTCTTaGGAGACACGCAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: RPRRRWTPARAATGAPDARGPWS*ETRRET
Trigger: AGTCTCCCTGCGTGTCTCCCAAGACCACGGACCCCG...TGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAGCCCGCGGGGTCCGTGGTCTTaGGAGACACGCAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: VGRSHERPLHGGSPVLSPRGPWS*ETRRET
Trigger: AGTCTCCCTGCGTGTCTCCCAAGACCACGGACCCCG...CGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GGCCCAGCGTCAACACTGGGGATCTCGCCCTGCGGCAGCCTGGGGGCTCTGCCTGCCGAGCTGGTGTACTaGGTGGTGTTGCCCAACCAC +
Preference number: 4 (lower is better)
Translates to: GPASTLGISPCGSLGALPAELVY*VVLPNH
Trigger: GTGGTTGGGCAACACCACCCAGTACACCAGCTCGGC...AGGCAGAGCCCCCAGGCTGCCGCAGGGCGAGATCCCCAGTGTTGACGCTGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGACAGCGTGCGGCCGCTaGGTTGCGGGACGTGAACGC +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLTACGR*VAGRER
Trigger: GCGTTCACGTCCCGCAACCCAGCGGCCGCACGCTGT...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGCGTGGCCACTGGCCTaGGCACGTCCTGGACGGCGG +
Preference number: 4 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVAWPLA*ARPGRR
Trigger: CCGCCGTCCAGGACGTGCCCAGGCCAGTGGCCACGC...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTGCGAGCCGGGGTGCGTaGCCACTGGCCTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGASRGA*PLAWAR
Trigger: ACGTGCCCAGGCCAGTGGCCACGCACCCCGGCTCGC...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCAGCAAGAGCAGCGACTaGAGCCCCAGACGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAASKSSD*SPRRRF
Trigger: GAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTTGCT...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCGTCCGAGGCGGCGATaGACGCCAGCAAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLERPRRR*TPARAA
Trigger: CGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCGTCCGAGGCGGCGATaGACGCCAGCAAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLRPRRR*TPARAA
Trigger: CGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCATAGCCATAGTGTTCTaGGGCGGCCGCGGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: RDAIVPERTVQAVPSAGAIAIVF*GGRGGA
Trigger: GGCGCCGCCGCGGCCGCCCCAGAACACTATGGCTAT...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318065.9
ENST00000329101.8
CDS-3UTR CCA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGGTCCTCATGCACCTCTaGCAGCAGCCGTGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLEVLMHL*QQPWPG
Trigger: GCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGAC...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTCGGTGGTCAGCGCGTTaGTGGCGGCCACGATGGCCG +
Preference number: 4 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVRWSAR*WRPRWP
Trigger: CGGCCATCGTGGCCGCCATCAACGCGCTGACCACCG...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTCGACGGGCTCCACCTTaGGCGCCACTGAGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGRRAPP*APLRAA
Trigger: AGCCGCCCTCAGTGGCGCTCAAGGTGGAGCCCGTCG...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACAAGCTCATACGGGCCTaGGTGGGACGGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDKLIRA*VGRQLP
Trigger: TGGCAGCTGCCGTCCCACTCAGGCCCGTATGAGCTT...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GCTGGCATCAGGGTGCTTCTCTGCGGACAGGGCGGGAAGCCGGCCACGAGGCAGAGGCAGCTCCTGAGCTaGGCGCTGGGAGCATTCGAT +
Preference number: 4 (lower is better)
Translates to: AGIRVLLCGQGGKPATRQRQLLS*ALGAFD
Trigger: ATCGAATGCTCCCAGCGCTCAGCTCAGGAGCTGCCT...CTGCCTCGTGGCCGGCTTCCCGCCCTGTCCGCAGAGAAGCACCCTGATGCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR GCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGGACACGCAGGGAGACTaGCATGGCGACGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLDTQGD*HGDVWG
Trigger: CCCCCAGACGTCGCCATGGCAGTCTCCCTGCGTGTC...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGGGAACCCAGCAGTGTaGAGGCCCCCAGCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSGNPAV*RPPARG
Trigger: CCCGCGGGCTGGGGGCCTGCACACTGCTGGGTTCCC...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTCCTGCAGGGACAGCGTaGGGCCGCTGGGTTGCGGGA +
Preference number: 4 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVPAGTA*GRWVAG
Trigger: TCCCGCAACCCAGCGGCCGCACGCTGTCCCTGCAGG...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGCCCATGAAAGGCCCCTaGACGGTGGGTCTCCCGTGC +
Preference number: 4 (lower is better)
Translates to: ENARPSEAAMDASKSSDWPMKGP*TVGLPC
Trigger: GCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGG...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCGCCTCCACCCGCAGGTaGAATTCAGGCAGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAAASTRR*NSGRFH
Trigger: ATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGC...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCCCCAGACGCACAAGAGACGCGATTGTaGCGGAGCGCACGGTACAGG +
Preference number: 4 (lower is better)
Translates to: RPRRRWTPARAATGAPDAQETRL*RSARYR
Trigger: CCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG...TGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGGTCTTCACGGTTACGTaGAGACCGACGGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTVFTVT*RPTGWP
Trigger: AGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGAC...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCGTCTTCACGGTTACGTaGAGACCGACGGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAAVFTVT*RPTGWP
Trigger: AGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGAC...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCGCTGGGCTGCAGGGCTaGAGGCAGGTCGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SNCVRRENARPSEAAMDAAGLQG*RQVGSW
Trigger: CCAAGAGCCGACCTGCCTGCAGCCCTGCAGCCCAGC...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CCCAGGGGTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCAAGGGACTGGAAAGCTaGTGCTTGGCATCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: PRGARRAGRGVKLRVGRSKGLES*CLASAR
Trigger: CCGCGCGGATGCCAAGCACCAGCTTTCCAGTCCCTT...GGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCCTCCTCGGGGTCCGTaGTCTTGGGAGACACGCAGG +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLPPRGP*SWETRR
Trigger: CCTGCGTGTCTCCCAAGACCACGGACCCCGAGGAGG...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAGCCCGGCCGAGCTGGTGTACTaGGTGGTGTTGCCCAACCAC +
Preference number: 4 (lower is better)
Translates to: VGRSHERPLHGGSPVLSPAELVY*VVLPNH
Trigger: GTGGTTGGGCAACACCACCCAGTACACCAGCTCGGC...CGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GAGAACGGGCGAAGGCTGGTGCCCAGGGTGAGCCTGGGGAACCTGGCCTGCGTTTCATACGGGCCTGAGTaGGACGGCAGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: ENGRRLVPRVSLGNLACVSYGPE*DGSCQS
Trigger: GGACTGGCAGCTGCCGTCCCACTCAGGCCCGTATGA...AACGCAGGCCAGGTTCCCCAGGCTCACCCTGGGCACCAGCCTTCGCCCGTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCATGCAGCTGCACGATaGGGTGTCCTCCGGCCGACG +
Preference number: 4 (lower is better)
Translates to: RDAIVPERTVQAVPSAGAHAAAR*GVLRPT
Trigger: CGTCGGCCGGAGGACACCCCATCGTGCAGCTGCATG...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCAGCATTCGATGGGGTTaGAGGCCACCTGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAASIRWG*RPPAGT
Trigger: TGTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCT...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CTGGACGGCGGGGGCCTCTCCGGCCGGCTGCGGGAGTCCGAGGTGACAGTGGCCGACATGGTGGCCATCTaGGGCTTTCTCCACGAAAAT +
Preference number: 4 (lower is better)
Translates to: LDGGGLSGRLRESEVTVADMVAI*GFLHEN
Trigger: ATTTTCGTGGAGAAAGCCCCAGATGGCCACCATGTC...GGCCACTGTCACCTCGGACTCCCGCAGCCGGCCGGAGAGGCCCCCGCCGTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCGGAGCTGGGGTCGGGTaGCATCGCGAGCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSGAGVG*HRELLA
Trigger: AGCCAGCAGCTCGCGATGCCACCCGACCCCAGCTCC...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCACGCCAGGGGCCGCTaGCATCAGGGTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLHARGR*HQGASL
Trigger: CAGAGAAGCACCCTGATGCCAGCGGCCCCTGGCGTG...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAGCCCGGGCTGGCAACGCCCTTaGTGTAGGCAGCGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: VGRSHERPLHGGSPVLSPGWQRP*CRQREK
Trigger: TTTCTCCCGCTGCCTACACCAAGGGCGTTGCCAGCC...CGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGAGCTTGGGGCTCACGCCAGGGGCCGCTGGCATCAGGGTGCTTCTCTGCGGACGGCTGGCAACGCCCTTaGTGTAGGCAGCGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GAWGSRQGPLASGCFSADGWQRP*CRQREK
Trigger: TTTCTCCCGCTGCCTACACCAAGGGCGTTGCCAGCC...GTCCGCAGAGAAGCACCCTGATGCCAGCGGCCCCTGGCGTGAGCCCCAAGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGGGGTGCGTGGCCACTaGCCTGGGCACGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVGVRGH*PGHVLD
Trigger: GTCCAGGACGTGCCCAGGCCAGTGGCCACGCACCCC...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAGCGAGCCGGGGTGCGTaGCCACTGGCCTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGAASRGA*PLAWAR
Trigger: ACGTGCCCAGGCCAGTGGCCACGCACCCCGGCTCGC...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGAAGGCCCCTGCACGGTaGGTCTCCCGTGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QETRLCRSARYRPFLLREKAPAR*VSRAQP
Trigger: GGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTT...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGGGGTCAAACTGCGTGTaGGCCGTTCCCATGAAAGGC +
Preference number: 4 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTGSNCV*AVPMKG
Trigger: GCCTTTCATGGGAACGGCCCACACGCAGTTTGACCC...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTCCCGGTGTGGAGGTCTaGAGGTTGTGGCACGGGGCC +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGPGVEV*RLWHGA
Trigger: GGCCCCGTGCCACAACCTTCAGACCTCCACACCGGG...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATGATCCGCCGGCGGGATaGTGCCCGGTGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHDPPAG*CPVWRS
Trigger: AGACCTCCACACCGGGCATCATCCCGCCGGCGGATC...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp CCTGGAGAAGTGTCTCGGGGACGTCCGCCCAGCACAAAGCTCATTCACCATCCTGCCAGCTCTCCTCAGTaGCGCTGGCGCGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: PGEVSRGRPPSTKLIHHPASSPQ*RWRGAR
Trigger: CCTCGCCCCGCGCCAGCGTCACTGAGGAGAGCTGGC...AGGATGGTGAATGAGCTTTGTGCTGGGCGGACGTCCCCGAGACACTTCTCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR TCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTCACCTTGAGCGCCACTaGGGGCGGCTGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGHLERH*GRLLQG
Trigger: ACCCTGGAGCAGCCGCCCTCAGTGGCGCTCAAGGTG...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTCGACGGGCTCCACCTTaGGCGCCACTGAGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSRRAPP*APLRAA
Trigger: AGCCGCCCTCAGTGGCGCTCAAGGTGGAGCCCGTCG...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCATGCGGGAGTCCGAGGTaGCAGTGGCCCGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGACGSPR*QWPGLA
Trigger: TGCCAGCCCGGGCCACTGTCACCTCGGACTCCCGCA...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCTGTGGGCCGTTCCCATaGAAGGCCCCTGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSCGPFP*KAPARW
Trigger: CCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACA...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGGGACTGGAAAGCTGGTaGTTGGCATCCGCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: QETRLCRSARYRPFLLREGLESW*LASARR
Trigger: CCGCCGCGCGGATGCCAAGCACCAGCTTTCCAGTCC...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR GCA 90 bp TCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGCCCACCGTCCAAAGCTaGTCCGTACCCCGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SNCVWAVPMKGPCTVGLPPTVQS*SVPRGV
Trigger: CACCCCTCGGGGTACGGAGCAGCTTTGGACGGTGGG...CGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTGACACGCAGGGAGACTaGCATGGCGACGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AIVPERTVQAVPSAGALSDTQGD*HGDVWG
Trigger: CCCCCAGACGTCGCCATGGCAGTCTCCCTGCGTGTC...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp CGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCCCCAGACGCATGTACTGGGTGGTGTTaGCCAACCACGAGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: RPRRRWTPARAATGAPDACTGWC*PTTSRR
Trigger: CCGACGACTCGTGGTTGGGCAACACCACCCAGTACA...TGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGGGTTGGAGGCCACCTaGAGGGACAGCGTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSGLEAT*RDSVRP
Trigger: CGGCCGCACGCTGTCCCTGCAGGTGGCCTCCAACCC...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCATCAGGGTGCTTCTCTaGGGACAGGGCGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: RDAIVPERTVQAVPSAGAIRVLL*GQGGKP
Trigger: CGGCTTCCCGCCCTGTCCGCAGAGAAGCACCCTGAT...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGATCAGGGTGCTTCTCTaGGGACAGGGCGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: ENARPSEAAMDASKSSDWIRVLL*GQGGKP
Trigger: CGGCTTCCCGCCCTGTCCGCAGAGAAGCACCCTGAT...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCGGCGTGGGGTCAAACTaGGTGTGGGCCGTTCCCATG +
Preference number: 4 (lower is better)
Translates to: RDAIVPERTVQAVPSAGAGVGSN*VWAVPM
Trigger: CATGGGAACGGCCCACACGCAGTTTGACCCCACGCC...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCGTGAGACGAGAAAATaGACGGCCGTCCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLRETRK*TAVRGG
Trigger: GCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACG...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCCCCAGACGCAGCCTCCACCCGCAGGTaGAATTCAGGCAGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: RPRRRWTPARAATGAPDAASTRR*NSGRFH
Trigger: ATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGC...TGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCTGTAGGCCTCCAGGCTaGGCAGACTCAGCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSCRPPG*ADSAWP
Trigger: CGGCCACGCTGAGTCTGCCCAGCCTGGAGGCCTACA...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCTGTAGGCCTCCAGGCTaGGCAGACTCAGCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SNCVRRENARPSEAAMDACRPPG*ADSAWP
Trigger: CGGCCACGCTGAGTCTGCCCAGCCTGGAGGCCTACA...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGCGGGGTCCGTGGTCTTaGGAGACACGCAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: ENARPSEAAMDASKSSDWRGPWS*ETRRET
Trigger: AGTCTCCCTGCGTGTCTCCCAAGACCACGGACCCCG...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCAGCTGGTGTACTGGGTaGTGTTGCCCAACCACGAGT +
Preference number: 4 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAASWCTG*CCPTTS
Trigger: ACTCGTGGTTGGGCAACACCACCCAGTACACCAGCT...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCCGAGCTGGTGTACTaGGTGGTGTTGCCCAACCAC +
Preference number: 4 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDAELVY*VVLPNH
Trigger: GTGGTTGGGCAACACCACCCAGTACACCAGCTCGGC...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTGGCACCGCCAGGTACTaGTCGCAGAAGCCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: AIVPERTVQAVPSAGALSGTARY*SQKPPF
Trigger: GAAGGGCGGCTTCTGCGACCAGTACCTGGCGGTGCC...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACTGGTGTTGGAGAGGATaGCCTCGTGGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDWCWRG*PRGWWW
Trigger: CCACCACCAGCCACGAGGCCATCCTCTCCAACACCA...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCCCCAGACGCACCAGGACTTTGGTGTTaGAGAGGATGGCCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: RPRRRWTPARAATGAPDAPGLWC*RGWPRG
Trigger: GCCACGAGGCCATCCTCTCCAACACCAAAGTCCTGG...TGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATGGAGCTGGGGTCGGGTaGCATCGCGAGCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHGAGVG*HRELLA
Trigger: AGCCAGCAGCTCGCGATGCCACCCGACCCCAGCTCC...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCCACGCCAGGGGCCGCTaGCATCAGGGTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSHARGR*HQGASL
Trigger: CAGAGAAGCACCCTGATGCCAGCGGCCCCTGGCGTG...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGGCGGGAGAAAGGTCGTaGAGCTTGGGGCTCACGCCA +
Preference number: 4 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLEAGERS*SLGLTP
Trigger: TGGCGTGAGCCCCAAGCTCCACGACCTTTCTCCCGC...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCGACAGTGGCCCGGGCTaGCAACGCCCTTGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSDSGPG*QRPWCR
Trigger: CCTACACCAAGGGCGTTGCCAGCCCGGGCCACTGTC...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GAAGTTGTGGCCAGACAGGACCATCTTCTTCCCGCCCACGACCGGATAGCTGTCGCGTGGCCACTGGCCTaGGCACGTCCTGGACGGCGG +
Preference number: 4 (lower is better)
Translates to: EVVARQDHLLPAHDRIAVAWPLA*ARPGRR
Trigger: CCGCCGTCCAGGACGTGCCCAGGCCAGTGGCCACGC...GACAGCTATCCGGTCGTGGGCGGGAAGAAGATGGTCCTGTCTGGCCACAACTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp GTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAGCCCGTTTCATTTACTGCTGTaGCAGCAGGGCCGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: VGRSHERPLHGGSPVLSPFHLLL*QQGRGW
Trigger: CCACCCCCGGCCCTGCTGCCACAGCAGTAAATGAAA...CGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
CDS-3UTR CCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATAAGGCCCCTGCACGGTaGGTCTCCCGTGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHKAPAR*VSRAQP
Trigger: GGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTT...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTAAGGCCCCTGCACGGTaGGTCTCCCGTGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGKAPAR*VSRAQP
Trigger: GGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTT...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCAGAAGGGCTGGGCGTaGGGTCAAACTGCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLEQKGWA*GQTACG
Trigger: CCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTG...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCGGGTGCCAGAAGGGCTaGGCGTGGGGTCAAACTGCG +
Preference number: 4 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSGCQKG*AWGQTA
Trigger: CGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCC...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCACAGGGAAGCCCTCCTaGGCGAGGACACGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSTGKPS*ARTRRL
Trigger: GAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGT...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCGTACCCAGCCGCAGGTaGGACGCGGCCACACGTCTT +
Preference number: 4 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSVPSRR*DAATRL
Trigger: AAGACGTGTGGCCGCGTCCCACCTGCGGCTGGGTAC...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGGCGGCTGCCGGCCGTTaGGGCTGTACTTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: QETRLCRSARYRPFLLREAAAGR*GCTSSC
Trigger: ACAAGAGGAAGTACAGCCTCAACGGCCGGCAGCCGC...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCAGTCGTCGGTCACGCTaGCCCGCGGGGAGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFSRRSR*PAGSRA
Trigger: CGCACGGCTCCCCGCGGGTCAGCGTGACCGACGACT...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp CCTGGAGAAGTGTCTCGGGGACGTCCGCCCAGCACAAAGCTCATTCACCATCCTCGACGGGCTCCACCTTaGGCGCCACTGAGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: PGEVSRGRPPSTKLIHHPRRAPP*APLRAA
Trigger: AGCCGCCCTCAGTGGCGCTCAAGGTGGAGCCCGTCG...AGGATGGTGAATGAGCTTTGTGCTGGGCGGACGTCCCCGAGACACTTCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR TCA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTAAGCTCATACGGGCCTaGGTGGGACGGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: AIVPERTVQAVPSAGALSKLIRA*VGRQLP
Trigger: TGGCAGCTGCCGTCCCACTCAGGCCCGTATGAGCTT...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCAAGCTCATACGGGCCTaGGTGGGACGGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSKLIRA*VGRQLP
Trigger: TGGCAGCTGCCGTCCCACTCAGGCCCGTATGAGCTT...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCGTCCGCCGTCCCAATaGAAAGCTGCAGCATCAGCG +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLRPPSQ*KAAASA
Trigger: CGCTGATGCTGCAGCTTTTCATTGGGACGGCGGACG...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTCTGGGTTGCGGGACGTaGACGCGGAACACCAGCCGT +
Preference number: 4 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVLGCGT*TRNTSR
Trigger: ACGGCTGGTGTTCCGCGTTCACGTCCCGCAACCCAG...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCCCCAGACGCAGGGCTGGTTATCCTCTaGTTCCGAAATGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: RPRRRWTPARAATGAPDAGLVIL*FRNGGI
Trigger: GATCCCGCCATTTCGGAATCAGAGGATAACCAGCCC...TGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGTGCCCGCGCCCTGCTaGTGGGATCTGGCGCGGCGA +
Preference number: 4 (lower is better)
Translates to: LEPQTQVPKRMPVIADREVPAPC*WDLARR
Trigger: TCGCCGCGCCAGATCCCAGCAGCAGGGCGCGGGCAC...TTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR GCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGACACGCAGGGAGACTaGCATGGCGACGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVDTQGD*HGDVWG
Trigger: CCCCCAGACGTCGCCATGGCAGTCTCCCTGCGTGTC...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp GCTGAACTGAGTGCTCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGGGAACCCAGCAGTGTaGAGGCCCCCAGCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: AELSAPMWQLGVGARAGEGNPAV*RPPARG
Trigger: CCCGCGGGCTGGGGGCCTGCACACTGCTGGGTTCCC...CTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGAGCACTCAGTTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253506.9
ENST00000318065.9
CDS-3UTR GCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGGGGAACCCAGCAGTGTaGAGGCCCCCAGCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLGNPAV*RPPARG
Trigger: CCCGCGGGCTGGGGGCCTGCACACTGCTGGGTTCCC...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTCTCCCAGGTCCAGGCTaGTGTCGGTGGTCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGLPGPG*CRWSAR
Trigger: ACGCGCTGACCACCGACAGCAGCCTGGACCTGGGAG...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCGAGTGGGACGGCAGCTaGCAGTCCAGGGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPEWDGS*QSRAGR
Trigger: CCTGCCCGCCCTGGACTGGCAGCTGCCGTCCCACTC...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GCAGCCGTGGCCCGGCAGTCGGAGACTCGTCCCTGCGGACCGTGGACGGCAGGTGTCCCAATGAAAAGCTaGAGCATCAGCGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: AAVARQSETRPCGPWTAGVPMKS*SISGSF
Trigger: GAATGAGCCGCTGATGCTGCAGCTTTTCATTGGGAC...ACCTGCCGTCCACGGTCCGCAGGGACGAGTCTCCGACTGCCGGGCCACGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR GCA 90 bp GGTCACCCAGGGACTATGGTGCTACGTCCAGGAGAGAAGAGACGACGGAGGCAAGGGTTGGAGGCCACCTaGAGGGACAGCGTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GHPGTMVLRPGEKRRRRQGLEAT*RDSVRP
Trigger: CGGCCGCACGCTGTCCCTGCAGGTGGCCTCCAACCC...TTGCCTCCGTCGTCTCTTCTCTCCTGGACGTAGCACCATAGTCCCTGGGTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp TCCTCATGCACCTCTGGCAGCAGCCGTGGCCCGGCAGTCGGAGACTCGTCCCTGCCGGATAGCTGTCCGTaGTCTGCTTCTCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: SSCTSGSSRGPAVGDSSLPDSCP*SASPPE
Trigger: CTCTGGTGGAGAAGCAGAGCACGGACAGCTATCCGG...CAGGGACGAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR GCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCATCAGGGTGCTTCTCTaGGGACAGGGCGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: SNCVRRENARPSEAAMDAIRVLL*GQGGKP
Trigger: CGGCTTCCCGCCCTGTCCGCAGAGAAGCACCCTGAT...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAACCGCTGGCATCAGGGTaGTTCTCTGCGGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKPLASG*FSADRA
Trigger: CGCCCTGTCCGCAGAGAAGCACCCTGATGCCAGCGG...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTCCGCTGGCATCAGGGTaGTTCTCTGCGGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVPLASG*FSADRA
Trigger: CGCCCTGTCCGCAGAGAAGCACCCTGATGCCAGCGG...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATCCCATGAAAGGCCCCTaGACGGTGGGTCTCCCGTGC +
Preference number: 4 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHPMKGP*TVGLPC
Trigger: GCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGG...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTCCTACAGTGCCGGGTaGAGGGTACCCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHSYSAG*RVPSRR
Trigger: CCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGA...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCGGAGGCGCACTCACCTaGTGTGGCAGCAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPGGALT*CGSRAG
Trigger: CCCGGCCCTGCTGCCACAGCAGGTGAGTGCGCCTCC...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTCGGAGACTCGTCCCTaGGGACCGTGGACGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHSETRP*GPWTAG
Trigger: ACCTGCCGTCCACGGTCCGCAGGGACGAGTCTCCGA...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GGTCTTGGGAGAGGACTTAACCCCTGGCTCACCGGTCCACAGGTTGGAGCAGGCTCGGAGACTCGTCCCTaGGGACCGTGGACGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GLGRGLNPWLTGPQVGAGSETRP*GPWTAG
Trigger: ACCTGCCGTCCACGGTCCGCAGGGACGAGTCTCCGA...GCCTGCTCCAACCTGTGGACCGGTGAGCCAGGGGTTAAGTCCTCTCCCAAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR GCA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGGGACTACCGTCCTCATaGACCTCTGGCAGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLEGLPSS*TSGSSR
Trigger: ACGGCTGCTGCCAGAGGTGCATGAGGACGGTAGTCC...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAACGGTTCTCCCGGCGCTaGCCGCGCGTCCTCCGCGTA +
Preference number: 4 (lower is better)
Translates to: LEPQTQVPKRMPVIADRERFSRR*PRVLRV
Trigger: TACGCGGAGGACGCGCGGGCAGCGCCGGGAGAACCG...TTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545796.5
CDS-3UTR GCA 90 bp GGCCCAGCGTCAACACTGGGGATCTCGCCCTGCGGCAGCCTGGGGGCTCTGCCTACCCAGGGACTATGGTaGTACGTCCAGGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: GPASTLGISPCGSLGALPTQGLW*YVQERR
Trigger: TCTTCTCTCCTGGACGTAGCACCATAGTCCCTGGGT...AGGCAGAGCCCCCAGGCTGCCGCAGGGCGAGATCCCCAGTGTTGACGCTGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCCCGCGCCCTGCTGCTaGGATCTGGCGCGGCGACTC +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLPAPCC*DLARRL
Trigger: GAGTCGCCGCGCCAGATCCCAGCAGCAGGGCGCGGG...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTAGGACCTGCGCGGTaGCTCCGAGCCCTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLLGPAR*LRALPA
Trigger: CGCGGGCAGGGCTCGGAGCCACCGCGCAGGTCCTAG...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTTGGAAAGCTGGTGCTTaGCATCCGCGCGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSWKAGA*HPRGGG
Trigger: GCCGCCGCCGCGCGGATGCCAAGCACCAGCTTTCCA...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTAGGCCTCCAGGCTaGGCAGACTCAGCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGCRPPG*ADSAWP
Trigger: CGGCCACGCTGAGTCTGCCCAGCCTGGAGGCCTACA...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTGTAGGCCTCCAGGCTaGGCAGACTCAGCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHCRPPG*ADSAWP
Trigger: CGGCCACGCTGAGTCTGCCCAGCCTGGAGGCCTACA...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTCCTCCTCGGGGTCCGTaGTCTTGGGAGACACGCAGG +
Preference number: 4 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVPPRGP*SWETRR
Trigger: CCTGCGTGTCTCCCAAGACCACGGACCCCGAGGAGG...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCCGTGCGGGGACGGCGTaGGCGAGTGGTGGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: GSPFSISDVLFSDFTAGARAGTA*ASGGVS
Trigger: ACTCACCCCACCACTCGCCCACGCCGTCCCCGCACG...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp TCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTCATACGGGCCTGAGTaGGACGGCAGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SNCVWAVPMKGPCTVGLPSYGPE*DGSCQS
Trigger: GGACTGGCAGCTGCCGTCCCACTCAGGCCCGTATGA...CGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCGAGAGGATGGCCTCGTaGCTGGTGGTGGACACGGTC +
Preference number: 4 (lower is better)
Translates to: SNCVRRENARPSEAAMDAERMAS*LVVDTV
Trigger: GACCGTGTCCACCACCAGCCACGAGGCCATCCTCTC...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGTGGTGTTGGAGAGGATaGCCTCGTGGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLEWCWRG*PRGWWW
Trigger: CCACCACCAGCCACGAGGCCATCCTCTCCAACACCA...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCGGATCTCCAGGACTTTaGTGTTGGAGAGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAAGSPGL*CWRGWP
Trigger: AGGCCATCCTCTCCAACACCAAAGTCCTGGAGATCC...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGGCTGGGAGCATTCGATaGGGTTGGAGGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: ENARPSEAAMDASKSSDWAGSIR*GWRPPA
Trigger: TGCAGGTGGCCTCCAACCCCATCGAATGCTCCCAGC...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTCACGCCAGGGGCCGCTaGCATCAGGGTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVHARGR*HQGASL
Trigger: CAGAGAAGCACCCTGATGCCAGCGGCCCCTGGCGTG...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTGCGGGAGAAAGGTCGTaGAGCTTGGGGCTCACGCCA +
Preference number: 4 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLAGERS*SLGLTP
Trigger: TGGCGTGAGCCCCAAGCTCCACGACCTTTCTCCCGC...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTGCGGGAGAAAGGTCGTaGAGCTTGGGGCTCACGCCA +
Preference number: 4 (lower is better)
Translates to: AIVPERTVQAVPSAGALSAGERS*SLGLTP
Trigger: TGGCGTGAGCCCCAAGCTCCACGACCTTTCTCCCGC...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGGGCTGGCAACGCCCTTaGTGTAGGCAGCGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLEGWQRP*CRQREK
Trigger: TTTCTCCCGCTGCCTACACCAAGGGCGTTGCCAGCC...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAACAGGGAAGCCCTCCTaGGCGAGGACACGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKTGKPS*ARTRRL
Trigger: GAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGT...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGAGCAAGAGCAGCGACTaGAGCCCCAGACGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLESKSSD*SPRRRF
Trigger: GAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTTGCT...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCAAGAGCAGCGACTaGAGCCCCAGACGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: ENARPSEAAMDASKSSDWSKSSD*SPRRRF
Trigger: GAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTTGCT...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCGGGGCAGCTACTGCTTaGAGGCGCACTCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: RLCRSARYRPFLLREPFLGAATA*RRTHLL
Trigger: CAGCAGGTGAGTGCGCCTCCAAGCAGTAGCTGCCCC...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCGTCCCTGCGGACCGTaGACGGCAGGTGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLRPCGP*TAGAAG
Trigger: GCCCGCAGCACCTGCCGTCCACGGTCCGCAGGGACG...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GATGAAGTTACCCCTGGAGAAGTGTCTCGGGGACGTCCGCCCAGCACAAAGCTCCCGCGAGGGCTGGGCTaGGGGCTGCACATCACCCCT +
Preference number: 4 (lower is better)
Translates to: DEVTPGEVSRGRPPSTKLPRGLG*GLHITP
Trigger: AGGGGTGATGTGCAGCCCCCAGCCCAGCCCTCGCGG...GAGCTTTGTGCTGGGCGGACGTCCCCGAGACACTTCTCCAGGGGTAACTTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR TCA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCCCCGGTGTGGAGGTCTaGAGGTTGTGGCACGGGGCC +
Preference number: 4 (lower is better)
Translates to: GSPFSISDVLFSDFTAGAPGVEV*RLWHGA
Trigger: GGCCCCGTGCCACAACCTTCAGACCTCCACACCGGG...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTTGGTCTTGCGGGACTTaGCAGGGACGCCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLWSCGT*QGRHLP
Trigger: TGGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCA...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCCGACGGGCTCCACCTTaGGCGCCACTGAGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFRRAPP*APLRAA
Trigger: AGCCGCCCTCAGTGGCGCTCAAGGTGGAGCCCGTCG...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp GATGGCGTTACCGTTGGCGGGAAGGTAGGTGAAACGCTGGTACTGGCTTCGCTTCGACGGGCTCCACCTTaGGCGCCACTGAGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: DGVTVGGKVGETLVLASLRRAPP*APLRAA
Trigger: AGCCGCCCTCAGTGGCGCTCAAGGTGGAGCCCGTCG...AAGCGAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCAACGGTAACGCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATAAGCTCATACGGGCCTaGGTGGGACGGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHKLIRA*VGRQLP
Trigger: TGGCAGCTGCCGTCCCACTCAGGCCCGTATGAGCTT...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGCAATGTCGGAGTTTCTaGGTTTCAGGATTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTQCRSF*VSGFRH
Trigger: GTGCCGGAATCCTGAAACTCAGAAACTCCGACATTG...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCACTGGGTTGCGGGACGTaGACGCGGAACACCAGCCGT +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGALGCGT*TRNTSR
Trigger: ACGGCTGGTGTTCCGCGTTCACGTCCCGCAACCCAG...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTAGGCAGCTCCTGAGCTaGGCGCTGGGAGCATTCGAT +
Preference number: 4 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLRQLLS*ALGAFD
Trigger: ATCGAATGCTCCCAGCGCTCAGCTCAGGAGCTGCCT...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CCCAGGGGTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCTGCAGACGTAGAAACTaGCGTGAACGGGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: PRGARRAGRGVKLRVGRSCRRRN*RERGWL
Trigger: TAACCAGCCCCGTTCACGTCAGTTTCTACGTCTGCA...GGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGTGGCGGGAAGGTAGGTaGAACGCTGGTACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLWREGR*NAGTGF
Trigger: GAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCA...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGTGGCGGGAAGGTAGGTaGAACGCTGGTACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLEWREGR*NAGTGF
Trigger: GAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCA...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCCCCAGACGCATCAGCATACCCCTGCTaGACTGAGTGCTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: RPRRRWTPARAATGAPDASAYPC*TECSNV
Trigger: CACATTGGAGCACTCAGTTCAGCAGGGGTATGCTGA...TGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GCTGGCATCAGGGTGCTTCTCTGCGGACAGGGCGGGAAGCCGGCCACGAGGCAGTCAGCATACCCCTGCTaGACTGAGTGCTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: AGIRVLLCGQGGKPATRQSAYPC*TECSNV
Trigger: CACATTGGAGCACTCAGTTCAGCAGGGGTATGCTGA...CTGCCTCGTGGCCGGCTTCCCGCCCTGTCCGCAGAGAAGCACCCTGATGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR TCA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCGACGTTCTGTTCAGTaGCTTCACAGCCGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLERRSVQ*LHSRSL
Trigger: GAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCG...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTCGCGGCCCTAGGACCTaGGCGGTGGCTCCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIRGPRT*AVAPSP
Trigger: AGGGCTCGGAGCCACCGCGCAGGTCCTAGGGCCGCG...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR GCA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACACGAGGTTATCTCGATaGGAGGACTCTCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDTRLSR*EDSPGQ
Trigger: CTGCCCTGGAGAGTCCTCGCATCGAGATAACCTCGT...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp CTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAATCCGGGAGGACAGGCTaGTGGCCGGGCTCAGGCACG +
Preference number: 4 (lower is better)
Translates to: LEPQTQVPKRMPVIADRESGRTG*WPGSGT
Trigger: CGTGCCTGAGCCCGGCCAGCAGCCTGTCCTCCCGGA...TTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp GCTGCTTTACGGCGACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTGGGAACCCAGCAGTGTaGAGGCCCCCAGCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: AALRRRRFCVFRKSTPRAGNPAV*RPPARG
Trigger: CCCGCGGGCTGGGGGCCTGCACACTGCTGGGTTCCC...AGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCGTAAAGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR GCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTCTCCCAGGTCCAGGCTaGTGTCGGTGGTCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSLPGPG*CRWSAR
Trigger: ACGCGCTGACCACCGACAGCAGCCTGGACCTGGGAG...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACTGGTGGGACTTGGGCTaGACCTCAATCCGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDWWDLG*TSIRSS
Trigger: TGAGCTTCGGATTGAGGTGCAGCCCAAGTCCCACCA...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCCCTGCAGGGACAGCGTaGGGCCGCTGGGTTGCGGGA +
Preference number: 4 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFPAGTA*GRWVAG
Trigger: TCCCGCAACCCAGCGGCCGCACGCTGTCCCTGCAGG...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTATCAGGGTGCTTCTCTaGGGACAGGGCGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVIRVLL*GQGGKP
Trigger: CGGCTTCCCGCCCTGTCCGCAGAGAAGCACCCTGAT...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGACGGTGGGTCTCCCGTaGTCAGCCCGGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLTVGLP*SARPPP
Trigger: GGGAGGTGGCCGGGCTGAGCACGGGAGACCCACCGT...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAACGGTGGGTCTCCCGTaGTCAGCCCGGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: LEPQTQVPKRMPVIADRETVGLP*SARPPP
Trigger: GGGAGGTGGCCGGGCTGAGCACGGGAGACCCACCGT...TTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAACGTGAGACGAGAAAATaGACGGCCGTCCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKRETRK*TAVRGG
Trigger: GCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACG...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGGCCTCCACCCGCAGGTaGAATTCAGGCAGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLASTRR*NSGRFH
Trigger: ATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGC...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCAAGAGACGCGATTGTaGCGGAGCGCACGGTACAGG +
Preference number: 4 (lower is better)
Translates to: RLCRSARYRPFLLREPFLQETRL*RSARYR
Trigger: CCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCGCTGGGCTGCAGGGCTaGAGGCAGGTCGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GSPFSISDVLFSDFTAGAAGLQG*RQVGSW
Trigger: CCAAGAGCCGACCTGCCTGCAGCCCTGCAGCCCAGC...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CCTGGAGAAGTGTCTCGGGGACGTCCGCCCAGCACAAAGCTCATTCACCATCCTGCCCCACCGGCTTCATaGTGTGGCCACGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PGEVSRGRPPSTKLIHHPAPPAS*CGHGPG
Trigger: CCCAGGACCGTGGCCACAGCATGAAGCCGGTGGGGC...AGGATGGTGAATGAGCTTTGTGCTGGGCGGACGTCCCCGAGACACTTCTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp ACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGCGTGCGGGGACGGCGTaGGCGAGTGGTGGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: TFCSVTSQPEPPPAGAIQRAGTA*ASGGVS
Trigger: ACTCACCCCACCACTCGCCCACGCCGTCCCCGCACG...CTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTCATACGGGCCTGAGTaGGACGGCAGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGSYGPE*DGSCQS
Trigger: GGACTGGCAGCTGCCGTCCCACTCAGGCCCGTATGA...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCTGGTGTTGGAGAGGATaGCCTCGTGGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RLCRSARYRPFLLREPFLWCWRG*PRGWWW
Trigger: CCACCACCAGCCACGAGGCCATCCTCTCCAACACCA...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGCCAGGACTTTGGTGTTaGAGAGGATGGCCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: ENARPSEAAMDASKSSDWPGLWC*RGWPRG
Trigger: GCCACGAGGCCATCCTCTCCAACACCAAAGTCCTGG...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGAGCATTCGATGGGGTTaGAGGCCACCTGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLSIRWG*RPPAGT
Trigger: TGTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCT...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCAGCATTCGATGGGGTTaGAGGCCACCTGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: RDAIVPERTVQAVPSAGASIRWG*RPPAGT
Trigger: TGTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCT...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCATTCGATGGGGTTaGAGGCCACCTGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: ENARPSEAAMDASKSSDWSIRWG*RPPAGT
Trigger: TGTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCT...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTGCTGGGAGCATTCGATaGGGTTGGAGGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: AIVPERTVQAVPSAGALSAGSIR*GWRPPA
Trigger: TGCAGGTGGCCTCCAACCCCATCGAATGCTCCCAGC...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CCCAGGGGTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCCTCTGATTCCGAAATaGCGGGATCTCAACCACCAG +
Preference number: 4 (lower is better)
Translates to: PRGARRAGRGVKLRVGRSPLIPK*RDLNHQ
Trigger: CTGGTGGTTGAGATCCCGCCATTTCGGAATCAGAGG...GGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CCGTCCTCATGCACCTCTGGCAGCAGCCGTGGCCCGGCAGTCGGAGACTCGTCCGTGAAACGCTGGTACTaGCTTCGCTTTCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: PSSCTSGSSRGPAVGDSSVKRWY*LRFLFP
Trigger: CGGGAAGAGAAAGCGAAGCCAGTACCAGCGTTTCAC...GGACGAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCACACGCCAGGGGCCGCTaGCATCAGGGTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGAHARGR*HQGASL
Trigger: CAGAGAAGCACCCTGATGCCAGCGGCCCCTGGCGTG...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAAAAGGTCGTGGAGCTTaGGGCTCACGCCAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGAKGRGA*GSRQGP
Trigger: CGGCCCCTGGCGTGAGCCCCAAGCTCCACGACCTTT...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAGACAGTGGCCCGGGCTaGCAACGCCCTTGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGADSGPG*QRPWCR
Trigger: CCTACACCAAGGGCGTTGCCAGCCCGGGCCACTGTC...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACGCGAGCCGGGGTGCGTaGCCACTGGCCTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: FLSVSETQETRLCRSARYASRGA*PLAWAR
Trigger: ACGTGCCCAGGCCAGTGGCCACGCACCCCGGCTCGC...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTAGCGAGCCGGGGTGCGTaGCCACTGGCCTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: VIADREALLGEDTSALLLASRGA*PLAWAR
Trigger: ACGTGCCCAGGCCAGTGGCCACGCACCCCGGCTCGC...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTGCGAGCCGGGGTGCGTaGCCACTGGCCTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIASRGA*PLAWAR
Trigger: ACGTGCCCAGGCCAGTGGCCACGCACCCCGGCTCGC...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCCCCAGACGCACTGAGTGCTCCAATGTaGCAACTAGGAGTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: RPRRRWTPARAATGAPDALSAPM*QLGVGA
Trigger: AGCACCCACTCCTAGTTGCCACATTGGAGCACTCAG...TGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTaGAGCCCCAGACGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SNCVRRENARPSEAAMDASKSSD*SPRRRF
Trigger: GAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTTGCT...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCCGTCCGAGGCGGCGATaGACGCCAGCAAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPRPRRR*TPARAA
Trigger: CGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCTGCAGACCGACGGGATaGCCTTCAGGTTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAACRPTG*PSGCFF
Trigger: AAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCA...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTGTCCTCATGCACCTCTaGCAGCAGCCGTGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: TVQAVPSAGALSPSATFCVLMHL*QQPWPG
Trigger: GCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGAC...ACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCGTCCTCATGCACCTCTaGCAGCAGCCGTGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GSPFSISDVLFSDFTAGAVLMHL*QQPWPG
Trigger: GCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGAC...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GAGAACGGGCGAAGGCTGGTGCCCAGGGTGAGCCTGGGGAACCTGGCCTGCGTTCAGCCTGGATGCCCGTaGTCCCAGGAGATGAAGTTA +
Preference number: 4 (lower is better)
Translates to: ENGRRLVPRVSLGNLACVQPGCP*SQEMKL
Trigger: TAACTTCATCTCCTGGGACCACGGGCATCCAGGCTG...AACGCAGGCCAGGTTCCCCAGGCTCACCCTGGGCACCAGCCTTCGCCCGTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR TCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTGTTCTTCCTCCGCTaGCTTCATGGTGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSVFFLR*LHGAAG
Trigger: GCCGGCGGCACCATGAAGTCAGCGGAGGAAGAACAC...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253506.9
ENST00000427363.7
CDS-3UTR TCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGGATCCGCCGGCGGGATaGTGCCCGGTGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLDPPAG*CPVWRS
Trigger: AGACCTCCACACCGGGCATCATCCCGCCGGCGGATC...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp AAAGATGGCGTTACCGTTGGCGGGAAGGTAGGTGAAACGCTGGTACTGGCTTCGCCGTACCCCGAGGGGTaGTCCGCCGGCGGGATGATG +
Preference number: 4 (lower is better)
Translates to: KDGVTVGGKVGETLVLASPYPEG*SAGGMM
Trigger: CATCATCCCGCCGGCGGATCACCCCTCGGGGTACGG...CGAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCAACGGTAACGCCATCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTCGGTGGTCAGCGCGTTaGTGGCGGCCACGATGGCCG +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIRWSAR*WRPRWP
Trigger: CGGCCATCGTGGCCGCCATCAACGCGCTGACCACCG...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp CCTGCAGGGACAGCGTGCGGCCGCTGGGTTGCGGGACGTGAACGCGGAACACCACAATGTCGGAGTTTCTaGGTTTCAGGATTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: PAGTACGRWVAGRERGTPQCRSF*VSGFRH
Trigger: GTGCCGGAATCCTGAAACTCAGAAACTCCGACATTG...TGGTGTTCCGCGTTCACGTCCCGCAACCCAGCGGCCGCACGCTGTCCCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR TCA 90 bp GGAGCTTGGGGCTCACGCCAGGGGCCGCTGGCATCAGGGTGCTTCTCTGCGGACCTTTCTCCACGAAAATaGCCTTGGAGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GAWGSRQGPLASGCFSADLSPRK*PWSPAG
Trigger: TCCTGCAGGACTCCAAGGTCATTTTCGTGGAGAAAG...GTCCGCAGAGAAGCACCCTGATGCCAGCGGCCCCTGGCGTGAGCCCCAAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR TCA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGGGGCTGGTTATCCTCTaGTTCCGAAATGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: ENARPSEAAMDASKSSDWGLVIL*FRNGGI
Trigger: GATCCCGCCATTTCGGAATCAGAGGATAACCAGCCC...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATGCGGGAGTCCGAGGTaGCAGTGGCCCGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VIADREALLGEDTSALLLCGSPR*QWPGLA
Trigger: TGCCAGCCCGGGCCACTGTCACCTCGGACTCCCGCA...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CCCAGGGGTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCTCCCTTCTGTTGTCATaGGATGACTTCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PRGARRAGRGVKLRVGRSSLLLS*DDFSSR
Trigger: CCTGGAGGAGAAGTCATCTCATGACAACAGAAGGGA...GGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTGTGGGCCGTTCCCATaGAAGGCCCCTGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: TVQAVPSAGALSPSATFCCGPFP*KAPARW
Trigger: CCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACA...ACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGAGGCACTTCCAGTATTaGACCCCAGGGGTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLERHFQY*TPGVPE
Trigger: TTCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCT...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCCCTCCTCGAACTGCGTaGGACGAGAAAATGCACGGC +
Preference number: 4 (lower is better)
Translates to: SNCVRRENARPSEAAMDAPPRTA*DEKMHG
Trigger: GCCGTGCATTTTCTCGTCTCACGCAGTTCGAGGAGG...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCCCTCCTCGAACTGCGTaGGACGAGAAAATGCACGGC +
Preference number: 4 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSPPRTA*DEKMHG
Trigger: GCCGTGCATTTTCTCGTCTCACGCAGTTCGAGGAGG...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGCCTCCTCGAACTGCGTaGGACGAGAAAATGCACGGC +
Preference number: 4 (lower is better)
Translates to: SNCVWAVPMKGPCTVGLPPPRTA*DEKMHG
Trigger: GCCGTGCATTTTCTCGTCTCACGCAGTTCGAGGAGG...CGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CCCAGGGGTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCACACAACGCAGGGCTaGGCATTAAAGTGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: PRGARRAGRGVKLRVGRSHTTQG*ALKWRF
Trigger: AAAACGCCACTTTAATGCTCAGCCCTGCGTTGTGTG...GGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCGACGTTCTGTTCAGTaGCTTCACAGCCGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLRRSVQ*LHSRSL
Trigger: GAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCG...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCGTTTCTTTCCGTGAGTaGGACACAAGAGACGCGATT +
Preference number: 4 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAAVSFRE*DTRDAI
Trigger: AATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAAC...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CCCAGGGGTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCGGTTGTTTCTTTCCGTaGGTGAGACACAAGAGACGC +
Preference number: 4 (lower is better)
Translates to: PRGARRAGRGVKLRVGRSGCFFP*VRHKRR
Trigger: GCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACC...GGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATGAGAAAGGCTGCACGTaGCTCCTACAGTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHEKGCT*LLQCRV
Trigger: CACCCGGCACTGTAGGAGTCACGTGCAGCCTTTCTC...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTGAGAAAGGCTGCACGTaGCTCCTACAGTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGEKGCT*LLQCRV
Trigger: CACCCGGCACTGTAGGAGTCACGTGCAGCCTTTCTC...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGTGTACTGGGTGGTGTTaGCCAACCACGAGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: QETRLCRSARYRPFLLRECTGWC*PTTSRR
Trigger: CCGACGACTCGTGGTTGGGCAACACCACCCAGTACA...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp GATGGCGTTACCGTTGGCGGGAAGGTAGGTGAAACGCTGGTACTGGCTTCGCTTGCCACTGAGGGCGGCTaGTCCAGGGTGGTCTTGCGG +
Preference number: 4 (lower is better)
Translates to: DGVTVGGKVGETLVLASLATEGG*SRVVLR
Trigger: CCGCAAGACCACCCTGGAGCAGCCGCCCTCAGTGGC...AAGCGAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCAACGGTAACGCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR GCA 90 bp CTGGAGAAGTGTCTCGGGGACGTCCGCCCAGCACAAAGCTCATTCACCATCCTTGCCACTGAGGGCGGCTaGTCCAGGGTGGTCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LEKCLGDVRPAQSSFTILATEGG*SRVVLR
Trigger: CCGCAAGACCACCCTGGAGCAGCCGCCCTCAGTGGC...AAGGATGGTGAATGAGCTTTGTGCTGGGCGGACGTCCCCGAGACACTTCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp TCCTCATGCACCTCTGGCAGCAGCCGTGGCCCGGCAGTCGGAGACTCGTCCCTGCCAGAGAATTCGGCTTaGACAGGTCCCGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: SSCTSGSSRGPAVGDSSLPENSA*TGPGQF
Trigger: AAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGG...CAGGGACGAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR GCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCGCCTCCACCCGCAGGTaGAATTCAGGCAGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: SNCVRRENARPSEAAMDAASTRR*NSGRFH
Trigger: ATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGC...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTGTCTTCACGGTTACGTaGAGACCGACGGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLVFTVT*RPTGWP
Trigger: AGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGAC...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGGTCTTCACGGTTACGTaGAGACCGACGGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: SNCVWAVPMKGPCTVGLPVFTVT*RPTGWP
Trigger: AGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGAC...CGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp ACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCCTACAGTGCCGGGTaGAGGGTACCCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TVQAVPSAGALSPSATFCSYSAG*RVPSRR
Trigger: CCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGA...ACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAGCCCGGCTGACGTTGGAGGATaGATAGCCATAGTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: VGRSHERPLHGGSPVLSPADVGG*IAIVFW
Trigger: CCAGAACACTATGGCTATGCATCCTCCAACGTCAGC...CGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318065.9
ENST00000329101.8
CDS-3UTR GCA 90 bp AAAGCTGCAGCATCAGCGGCTCATTCTCCAAGTAGCCATGCAGCTGCACGATGGGGAGGCGCACTCACCTaGTGTGGCAGCAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: KAAASAAHSPSSHAAARWGGALT*CGSRAG
Trigger: CCCGGCCCTGCTGCCACAGCAGGTGAGTGCGCCTCC...CCATCGTGCAGCTGCATGGCTACTTGGAGAATGAGCCGCTGATGCTGCAGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR GCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGGACTACCGTCCTCATaGACCTCTGGCAGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVGLPSS*TSGSSR
Trigger: ACGGCTGCTGCCAGAGGTGCATGAGGACGGTAGTCC...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CCAGCCTGGATGCCCGTGGTCCCAGGAGATGAAGTTACCCCTGGAGAAGTGTCTCAGTCTGGTGCAGGTTaGGGTCGCAGCCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: PAWMPVVPGDEVTPGEVSQSGAG*GRSPQD
Trigger: GTCCTGGGGGCTGCGACCGCAACCTGCACCAGACTG...AGACACTTCTCCAGGGGTAACTTCATCTCCTGGGACCACGGGCATCCAGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp ACGGGACATCACACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTCCTGCTGCTGGGATCTaGCGCGGCGACTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: TGHHTVKCATRHAALRRRPAAGI*RGDSAG
Trigger: GCCGGCGGAGTCGCCGCGCCAGATCCCAGCAGCAGG...ACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGTGTGATGTCCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp CCTGGAGAAGTGTCTCGGGGACGTCCGCCCAGCACAAAGCTCATTCACCATCCTGACTCAGCGTGGCCGTaGAGGGGGACCGTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: PGEVSRGRPPSTKLIHHPDSAWP*RGTVWS
Trigger: GCTCCAAACGGTCCCCCTCCACGGCCACGCTGAGTC...AGGATGGTGAATGAGCTTTGTGCTGGGCGGACGTCCCCGAGACACTTCTCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGACGGGTACGAGTAGTTaGACTCGTAGGAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLTGTSS*TRRRRP
Trigger: AGGCCTCCTCCTACGAGTCCAACTACTCGTACCCGT...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTCGTGCGGGGACGGCGTaGGCGAGTGGTGGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIRAGTA*ASGGVS
Trigger: ACTCACCCCACCACTCGCCCACGCCGTCCCCGCACG...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCGGCACCGCCAGGTACTaGTCGCAGAAGCCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPGTARY*SQKPPF
Trigger: GAAGGGCGGCTTCTGCGACCAGTACCTGGCGGTGCC...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCATGGCCTCGTGGCTGGTaGTGGACACGGTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGAWPRGW*WTRSSL
Trigger: CAGGGAAGACCGTGTCCACCACCAGCCACGAGGCCA...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCAGGACTTTGGTGTTaGAGAGGATGGCCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: QETRLCRSARYRPFLLREPGLWC*RGWPRG
Trigger: GCCACGAGGCCATCCTCTCCAACACCAAAGTCCTGG...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCCCAGGACTTTGGTGTTaGAGAGGATGGCCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: SNCVRRENARPSEAAMDAPGLWC*RGWPRG
Trigger: GCCACGAGGCCATCCTCTCCAACACCAAAGTCCTGG...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GAGAACGGGCGAAGGCTGGTGCCCAGGGTGAGCCTGGGGAACCTGGCCTGCGTTGGATCTCCAGGACTTTaGTGTTGGAGAGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: ENGRRLVPRVSLGNLACVGSPGL*CWRGWP
Trigger: AGGCCATCCTCTCCAACACCAAAGTCCTGGAGATCC...AACGCAGGCCAGGTTCCCCAGGCTCACCCTGGGCACCAGCCTTCGCCCGTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTACAGCGTGCGGCCGCTaGGTTGCGGGACGTGAACGC +
Preference number: 4 (lower is better)
Translates to: GALSPSATFCSVTSQPEPTACGR*VAGRER
Trigger: GCGTTCACGTCCCGCAACCCAGCGGCCGCACGCTGT...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATGCTGGGAGCATTCGATaGGGTTGGAGGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHAGSIR*GWRPPA
Trigger: TGCAGGTGGCCTCCAACCCCATCGAATGCTCCCAGC...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAGCCCGGACATGGTGGCCATCTaGGGCTTTCTCCACGAAAAT +
Preference number: 4 (lower is better)
Translates to: VGRSHERPLHGGSPVLSPDMVAI*GFLHEN
Trigger: ATTTTCGTGGAGAAAGCCCCAGATGGCCACCATGTC...CGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGTGAAACGCTGGTACTaGCTTCGCTTTCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDVKRWY*LRFLFP
Trigger: CGGGAAGAGAAAGCGAAGCCAGTACCAGCGTTTCAC...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCCTCATGCACCTCTGGCAGCAGCCGTGGCCCGGCAGTCGGAGACTCGTCCCTGCACCGGTCCACAGGTTaGAGCAGGCTCATAATCATC +
Preference number: 4 (lower is better)
Translates to: SSCTSGSSRGPAVGDSSLHRSTG*SRLIII
Trigger: GATGATTATGAGCCTGCTCCAACCTGTGGACCGGTG...CAGGGACGAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGGGAGCTGGGGTCGGGTaGCATCGCGAGCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLGAGVG*HRELLA
Trigger: AGCCAGCAGCTCGCGATGCCACCCGACCCCAGCTCC...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTCACGCCAGGGGCCGCTaGCATCAGGGTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TVQAVPSAGALSPSATFCHARGR*HQGASL
Trigger: CAGAGAAGCACCCTGATGCCAGCGGCCCCTGGCGTG...ACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCAAAGGTCGTGGAGCTTaGGGCTCACGCCAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPKGRGA*GSRQGP
Trigger: CGGCCCCTGGCGTGAGCCCCAAGCTCCACGACCTTT...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCGCGTGGCCACTGGCCTaGGCACGTCCTGGACGGCGG +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFAWPLA*ARPGRR
Trigger: CCGCCGTCCAGGACGTGCCCAGGCCAGTGGCCACGC...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCGCGAGCCGGGGTGCGTaGCCACTGGCCTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFASRGA*PLAWAR
Trigger: ACGTGCCCAGGCCAGTGGCCACGCACCCCGGCTCGC...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCAGTGGGTGCTCGTGCTaGAGAGGTCATTTCGTATTA +
Preference number: 4 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAASGCSC*RGHFVL
Trigger: TAATACGAAATGACCTCTCCAGCACGAGCACCCACT...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGAGTGGGTGCTCGTGCTaGAGAGGTCATTTCGTATTA +
Preference number: 4 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTSGCSC*RGHFVL
Trigger: TAATACGAAATGACCTCTCCAGCACGAGCACCCACT...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGGGGTCAAACTGCGTGTaGGCCGTTCCCATGAAAGGC +
Preference number: 4 (lower is better)
Translates to: SNCVWAVPMKGPCTVGLPGSNCV*AVPMKG
Trigger: GCCTTTCATGGGAACGGCCCACACGCAGTTTGACCC...CGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCACAGAAGGGCTGGGCGTaGGGTCAAACTGCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGAQKGWA*GQTACG
Trigger: CCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTG...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATAGCAAGAGCAGCGACTaGAGCCCCAGACGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHSKSSD*SPRRRF
Trigger: GAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTTGCT...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCGCGCCCTCGTCGCGCTaGTTAAACTCGAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: SNCVRRENARPSEAAMDAAPSSR*LNSKRN
Trigger: GTTCCTCTTCGAGTTTAACCAGCGCGACGAGGGCGC...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318065.9
ENST00000329101.8
ENST00000545796.5
CDS-3UTR CCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTCCCTGCGGACCGTaGACGGCAGGTGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: PTATVNHSSWLSRVLLELRPCGP*TAGAAG
Trigger: GCCCGCAGCACCTGCCGTCCACGGTCCGCAGGGACG...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACGGGACATCACACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTGCCCCCAGGACCAGGTaGGGTGACAGGGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: TGHHTVKCATRHAALRRRAPRTR*GDREPG
Trigger: CCCCGGCTCCCTGTCACCCCACCTGGTCCTGGGGGC...ACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGTGTGATGTCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR TCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTCCCGGTGTGGAGGTCTaGAGGTTGTGGCACGGGGCC +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIPGVEV*RLWHGA
Trigger: GGCCCCGTGCCACAACCTTCAGACCTCCACACCGGG...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp ACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTACCGTTGGGATCCGCCGGCGGGATaGTGCCCGGTGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: TPRAHVHGLRLERWRYRWDPPAG*CPVWRS
Trigger: AGACCTCCACACCGGGCATCATCCCGCCGGCGGATC...CCAACGGTAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp CCCTTTTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATGCCAGCTCTCCTCAGTaGCGCTGGCGCGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: PFSFPFQGIDGSVSLTGHASSPQ*RWRGAR
Trigger: CCTCGCCCCGCGCCAGCGTCACTGAGGAGAGCTGGC...ATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAAAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp ACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTGCGGCTGCCGGCCGTTaGGGCTGTACTTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: TVQAVPSAGALSPSATFCAAAGR*GCTSSC
Trigger: ACAAGAGGAAGTACAGCCTCAACGGCCGGCAGCCGC...ACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCGCGGCTGCCGGCCGTTaGGGCTGTACTTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: GSPFSISDVLFSDFTAGAAAAGR*GCTSSC
Trigger: ACAAGAGGAAGTACAGCCTCAACGGCCGGCAGCCGC...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGAGTCGTCGGTCACGCTaGCCCGCGGGGAGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: GMAFRLFLSVSETQETRLSRRSR*PAGSRA
Trigger: CGCACGGCTCCCCGCGGGTCAGCGTGACCGACGACT...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATAGTCGTCGGTCACGCTaGCCCGCGGGGAGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: DREALLGEDTSALLLFIHSRRSR*PAGSRA
Trigger: CGCACGGCTCCCCGCGGGTCAGCGTGACCGACGACT...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp TTATTTAACAACCACACTGACAGTGGCCTCGAGGTAGGCCCAGCGTCAACACTGAGTCGTCGGTCACGCTaGCCCGCGGGGAGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: LFNNHTDSGLEVGPASTLSRRSR*PAGSRA
Trigger: CGCACGGCTCCCCGCGGGTCAGCGTGACCGACGACT...CAGTGTTGACGCTGGGCCTACCTCGAGGCCACTGTCAGTGTGGTTGTTAAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR TCA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGCTGGGTTGCGGGACGTaGACGCGGAACACCAGCCGT +
Preference number: 4 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWLGCGT*TRNTSR
Trigger: ACGGCTGGTGTTCCGCGTTCACGTCCCGCAACCCAG...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TTCAGGATTCCGGCACAGTCAATGACGGCTCGCATGCTGTTCTCCGGCAGGAGTCTGGGTTGCGGGACGTaGACGCGGAACACCAGCCGT +
Preference number: 4 (lower is better)
Translates to: FRIPAQSMTARMLFSGRSLGCGT*TRNTSR
Trigger: ACGGCTGGTGTTCCGCGTTCACGTCCCGCAACCCAG...ACTCCTGCCGGAGAACAGCATGCGAGCCGTCATTGACTGTGCCGGAATCCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR TCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTAGGCAGCTCCTGAGCTaGGCGCTGGGAGCATTCGAT +
Preference number: 4 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSRQLLS*ALGAFD
Trigger: ATCGAATGCTCCCAGCGCTCAGCTCAGGAGCTGCCT...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGGCGGGAAGGTAGGTaGAACGCTGGTACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGWREGR*NAGTGF
Trigger: GAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCA...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGATACCCCTGCTGAACTaGGTGCTCCAATGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: ENARPSEAAMDASKSSDWIPLLN*VLQCGN
Trigger: GTTGCCACATTGGAGCACTCAGTTCAGCAGGGGTAT...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCTCAGCATACCCCTGCTaGACTGAGTGCTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: RDAIVPERTVQAVPSAGASAYPC*TECSNV
Trigger: CACATTGGAGCACTCAGTTCAGCAGGGGTATGCTGA...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCCAATGCTCAATTCTATaGTGCCCTGATGGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAAQCSIL*CPDGLV
Trigger: AACCAGACCATCAGGGCATCATAGAATTGAGCATTG...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGAGCATGCGACTATaGACAAGCCTACGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDASMRL*TSLRFQ
Trigger: TTGAAACCGTAGGCTTGTTCATAGTCGCATGCTCGC...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGATGCCGGTTATTGCTaGCAGGGAAGCCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSDAGYC*QGSPPG
Trigger: CCCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATC...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAACCTCCTCGAACTGCGTaGGACGAGAAAATGCACGGC +
Preference number: 4 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKPPRTA*DEKMHG
Trigger: GCCGTGCATTTTCTCGTCTCACGCAGTTCGAGGAGG...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTCGACGTTCTGTTCAGTaGCTTCACAGCCGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGRRSVQ*LHSRSL
Trigger: GAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCG...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAGCCCGGTTTCTTTCCGTGAGTaGGACACAAGAGACGCGATT +
Preference number: 4 (lower is better)
Translates to: VGRSHERPLHGGSPVLSPVSFRE*DTRDAI
Trigger: AATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAAC...CGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCTCAATGACAGTCCCCTaGGAAAGGCTGCACGTGACT +
Preference number: 4 (lower is better)
Translates to: RDAIVPERTVQAVPSAGASMTVP*ERLHVT
Trigger: AGTCACGTGCAGCCTTTCTCAGGGGACTGTCATTGA...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCCACCGTCCAAAGCTaGTCCGTACCCCGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GALSPSATFCSVTSQPEPPTVQS*SVPRGV
Trigger: CACCCCTCGGGGTACGGAGCAGCTTTGGACGGTGGG...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGCCCACCGTCCAAAGCTaGTCCGTACCCCGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQPTVQS*SVPRGV
Trigger: CACCCCTCGGGGTACGGAGCAGCTTTGGACGGTGGG...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCACGAGGTTATCTCGATaGGAGGACTCTCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RLCRSARYRPFLLREPFLTRLSR*EDSPGQ
Trigger: CTGCCCTGGAGAGTCCTCGCATCGAGATAACCTCGT...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp GACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTCCGGGAGGACAGGCTaGTGGCCGGGCTCAGGCACG +
Preference number: 4 (lower is better)
Translates to: DVVSASLEKAPHALMFTASGRTG*WPGSGT
Trigger: CGTGCCTGAGCCCGGCCAGCAGCCTGTCCTCCCGGA...AGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR GCA 90 bp ACGGGACATCACACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTTCCGGGAGGACAGGCTaGTGGCCGGGCTCAGGCACG +
Preference number: 4 (lower is better)
Translates to: TGHHTVKCATRHAALRRRSGRTG*WPGSGT
Trigger: CGTGCCTGAGCCCGGCCAGCAGCCTGTCCTCCCGGA...ACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGTGTGATGTCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp TCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGGGAACCCAGCAGTGTaGAGGCCCCCAGCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: SFPFQGIDGSVSLTGHHTGNPAV*RPPARG
Trigger: CCCGCGGGCTGGGGGCCTGCACACTGCTGGGTTCCC...TGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCTGTACTTCCTCTTGTTaGAAGGGGACGCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: RLCRSARYRPFLLREPFLCTSSC*KGTRVW
Trigger: CCAGACCCGCGTCCCCTTGCAACAAGAGGAAGTACA...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAATGTACTGGGTGGTGTTaGCCAACCACGAGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKCTGWC*PTTSRR
Trigger: CCGACGACTCGTGGTTGGGCAACACCACCCAGTACA...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCGAGTGGGACGGCAGCTaGCAGTCCAGGGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFEWDGS*QSRAGR
Trigger: CCTGCCCGCCCTGGACTGGCAGCTGCCGTCCCACTC...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGGAGTGGGACGGCAGCTaGCAGTCCAGGGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RFCVFRKSTPRAHVHGLREWDGS*QSRAGR
Trigger: CCTGCCCGCCCTGGACTGGCAGCTGCCGTCCCACTC...CCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR GCA 90 bp GAGAACGGGCGAAGGCTGGTGCCCAGGGTGAGCCTGGGGAACCTGGCCTGCGTTGTCCCAATGAAAAGCTaGAGCATCAGCGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: ENGRRLVPRVSLGNLACVVPMKS*SISGSF
Trigger: GAATGAGCCGCTGATGCTGCAGCTTTTCATTGGGAC...AACGCAGGCCAGGTTCCCCAGGCTCACCCTGGGCACCAGCCTTCGCCCGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCCTGCAGGGACAGCGTaGGGCCGCTGGGTTGCGGGA +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFPAGTA*GRWVAG
Trigger: TCCCGCAACCCAGCGGCCGCACGCTGTCCCTGCAGG...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCAGGGTTGGAGGCCACCTaGAGGGACAGCGTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: TAPGFLGSSSNCVRRENAGLEAT*RDSVRP
Trigger: CGGCCGCACGCTGTCCCTGCAGGTGGCCTCCAACCC...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCGGGTTGGAGGCCACCTaGAGGGACAGCGTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFGLEAT*RDSVRP
Trigger: CGGCCGCACGCTGTCCCTGCAGGTGGCCTCCAACCC...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CCACCAGAGAATTCGGCTTGCACAGGTCCCGGTCAGTTTTCGCTTCCATCTCCCCCGCTGGCATCAGGGTaGTTCTCTGCGGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: PPENSACTGPGQFSLPSPPLASG*FSADRA
Trigger: CGCCCTGTCCGCAGAGAAGCACCCTGATGCCAGCGG...GGGAGATGGAAGCGAAAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR GCA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGAGGAGTGGGTGCTCGTaGTGGAGAGGTCATTTCGTA +
Preference number: 4 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLERSGCS*WRGHFV
Trigger: TACGAAATGACCTCTCCAGCACGAGCACCCACTCCT...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCCCCATGAAAGGCCCCTaGACGGTGGGTCTCCCGTGC +
Preference number: 4 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFPMKGP*TVGLPC
Trigger: GCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGG...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAACCCATGAAAGGCCCCTaGACGGTGGGTCTCCCGTGC +
Preference number: 4 (lower is better)
Translates to: LEPQTQVPKRMPVIADREPMKGP*TVGLPC
Trigger: GCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGG...TTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACTAATTGTACAGAGTaGCCAGCAAGGCCTACACAA +
Preference number: 4 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAATNCTE*PARPTQ
Trigger: TTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGT...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGACTAATTGTACAGAGTaGCCAGCAAGGCCTACACAA +
Preference number: 4 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTTNCTE*PARPTQ
Trigger: TTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGT...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp ACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGTCCTACAGTGCCGGGTaGAGGGTACCCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TFCSVTSQPEPPPAGAIQSYSAG*RVPSRR
Trigger: CCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGA...CTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CCTGGAGAAGTGTCTCGGGGACGTCCGCCCAGCACAAAGCTCATTCACCATCCTCTGGGGAACCTGGCCTaGGTTGAGCCATGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PGEVSRGRPPSTKLIHHPLGNLA*VEPCWS
Trigger: GCTCCAGCATGGCTCAACGCAGGCCAGGTTCCCCAG...AGGATGGTGAATGAGCTTTGTGCTGGGCGGACGTCCCCGAGACACTTCTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp CTGGAGAAGTGTCTCGGGGACGTCCGCCCAGCACAAAGCTCATTCACCATCCTTGGGCTCACAGTCTGGTaGAGGTTGCGGTCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LEKCLGDVRPAQSSFTILGLTVW*RLRSQP
Trigger: GGGCTGCGACCGCAACCTGCACCAGACTGTGAGCCC...AAGGATGGTGAATGAGCTTTGTGCTGGGCGGACGTCCCCGAGACACTTCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp GTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAGCCCGAAACTTGGAAGGGACTaGAAAGCTGGTGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: VGRSHERPLHGGSPVLSPKLGRD*KAGAWH
Trigger: ATGCCAAGCACCAGCTTTCCAGTCCCTTCCAAGTTT...CGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CCA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCGGCCAAGTGGAAACTTaGAAGGGACTGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RDAIVPERTVQAVPSAGAGQVET*KGLESW
Trigger: CCAGCTTTCCAGTCCCTTCCAAGTTTCCACTTGGCC...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCGGGAGGACAGGCTGCTaGCCGGGCTCAGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFGRTGC*PGSGTR
Trigger: CCTCGTGCCTGAGCCCGGCCAGCAGCCTGTCCTCCC...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCACGGGTACGAGTAGTTaGACTCGTAGGAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSTGTSS*TRRRRP
Trigger: AGGCCTCCTCCTACGAGTCCAACTACTCGTACCCGT...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp TCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGACGGGTACGAGTAGTTaGACTCGTAGGAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SNCVWAVPMKGPCTVGLPTGTSS*TRRRRP
Trigger: AGGCCTCCTCCTACGAGTCCAACTACTCGTACCCGT...CGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCCTCCTCGGGGTCCGTaGTCTTGGGAGACACGCAGG +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLPPRGP*SWETRR
Trigger: CCTGCGTGTCTCCCAAGACCACGGACCCCGAGGAGG...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTAGCTGGTGTACTGGGTaGTGTTGCCCAACCACGAGT +
Preference number: 4 (lower is better)
Translates to: AIVPERTVQAVPSAGALSSWCTG*CCPTTS
Trigger: ACTCGTGGTTGGGCAACACCACCCAGTACACCAGCT...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCATGCAGCTGCACGATaGGGTGTCCTCCGGCCGACG +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLHAAAR*GVLRPT
Trigger: CGTCGGCCGGAGGACACCCCATCGTGCAGCTGCATG...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CTGGAGAAGTGTCTCGGGGACGTCCGCCCAGCACAAAGCTCATTCACCATCCTTCATGCAGCTGCACGATaGGGTGTCCTCCGGCCGACG +
Preference number: 4 (lower is better)
Translates to: LEKCLGDVRPAQSSFTILHAAAR*GVLRPT
Trigger: CGTCGGCCGGAGGACACCCCATCGTGCAGCTGCATG...AAGGATGGTGAATGAGCTTTGTGCTGGGCGGACGTCCCCGAGACACTTCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCGGATGGCCTCGTGGCTaGTGGTGGACACGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPGWPRG*WWTRSS
Trigger: GGAAGACCGTGTCCACCACCAGCCACGAGGCCATCC...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AAAGCTGCAGCATCAGCGGCTCATTCTCCAAGTAGCCATGCAGCTGCACGATGGACAGCGTGCGGCCGCTaGGTTGCGGGACGTGAACGC +
Preference number: 4 (lower is better)
Translates to: KAAASAAHSPSSHAAARWTACGR*VAGRER
Trigger: GCGTTCACGTCCCGCAACCCAGCGGCCGCACGCTGT...CCATCGTGCAGCTGCATGGCTACTTGGAGAATGAGCCGCTGATGCTGCAGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGTCCTGCAGGAAGTTGTaGCCAGACAGGACCATCTTC +
Preference number: 4 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLESCRKL*PDRTIF
Trigger: GAAGATGGTCCTGTCTGGCCACAACTTCCTGCAGGA...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACGGAGCTGGGGTCGGGTaGCATCGCGAGCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: FLSVSETQETRLCRSARYGAGVG*HRELLA
Trigger: AGCCAGCAGCTCGCGATGCCACCCGACCCCAGCTCC...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCGGGGTGCGTGGCCACTaGCCTGGGCACGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFGVRGH*PGHVLD
Trigger: GTCCAGGACGTGCCCAGGCCAGTGGCCACGCACCCC...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp GTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAGCCCGAGTGGGTGCTCGTGCTaGAGAGGTCATTTCGTATTA +
Preference number: 4 (lower is better)
Translates to: VGRSHERPLHGGSPVLSPSGCSC*RGHFVL
Trigger: TAATACGAAATGACCTCTCCAGCACGAGCACCCACT...CGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTCTCCAGGTGACACAGTaGTCTCCCTTCCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGLQVTQ*SPFLPA
Trigger: AGCAGGGAGGAAGGGAGACCACTGTGTCACCTGGAG...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCCAGAAGGGCTGGGCGTaGGGTCAAACTGCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPQKGWA*GQTACG
Trigger: CCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTG...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGGGTGCCAGAAGGGCTaGGCGTGGGGTCAAACTGCG +
Preference number: 4 (lower is better)
Translates to: TFCSVTSQPEPPPAGAIQGCQKG*AWGQTA
Trigger: CGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCC...CTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGGGGTGCCAGAAGGGCTaGGCGTGGGGTCAAACTGCG +
Preference number: 4 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWGCQKG*AWGQTA
Trigger: CGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCC...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGACAGGGAAGCCCTCCTaGGCGAGGACACGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLTGKPS*ARTRRL
Trigger: GAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGT...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTGTACCCAGCCGCAGGTaGGACGCGGCCACACGTCTT +
Preference number: 4 (lower is better)
Translates to: GALSPSATFCSVTSQPEPVPSRR*DAATRL
Trigger: AAGACGTGTGGCCGCGTCCCACCTGCGGCTGGGTAC...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGAGGTCGGCTCTTGGGTaGCAGGCGGGAGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQRSALG*QAGVEE
Trigger: CTCCTCCACTCCCGCCTGCCACCCAAGAGCCGACCT...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CCGTCCTCATGCACCTCTGGCAGCAGCCGTGGCCCGGCAGTCGGAGACTCGTCCTCATCCAGGTACAACTaGTCCAACTCTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PSSCTSGSSRGPAVGDSSSSRYN*SNSSGS
Trigger: AGAGCCTGAAGAGTTGGACCAGTTGTACCTGGATGA...GGACGAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp GGTCACCCAGGGACTATGGTGCTACGTCCAGGAGAGAAGAGACGACGGAGGCAACTGCCAGGTGGGGTGTaGACTGGAGGTAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GHPGTMVLRPGEKRRRRQLPGGV*TGGSRS
Trigger: GCTCCTGCTACCTCCAGTCCACACCCCACCTGGCAG...TTGCCTCCGTCGTCTCTTCTCTCCTGGACGTAGCACCATAGTCCCTGGGTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR CAA 72 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATaGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGT +
Preference number: 4 (lower is better)
Translates to: SPRRRFQNGCRL*LTGKPSWARTR
Trigger: ACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTCGTTTCTGCGTCCCCGGTGTGGAGGTCTaGAGGTTGTGGCACGGGGCC +
Preference number: 4 (lower is better)
Translates to: TVKCATRHAALRRRRFCVPGVEV*RLWHGA
Trigger: GGCCCCGTGCCACAACCTTCAGACCTCCACACCGGG...GACGCAGAAACGACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp TCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACACCGTACCCCGAGGGGTaGTCCGCCGGCGGGATGATG +
Preference number: 4 (lower is better)
Translates to: SFPFQGIDGSVSLTGHHTPYPEG*SAGGMM
Trigger: CATCATCCCGCCGGCGGATCACCCCTCGGGGTACGG...TGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp TGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAGCCAGCTCTCCTCAGTaGCGCTGGCGCGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: CVFRKSTPRAHVHGLRLEASSPQ*RWRGAR
Trigger: CCTCGCCCCGCGCCAGCGTCACTGAGGAGAGCTGGC...TTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp TTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAAGTCGTCGGTCACGCTaGCCCGCGGGGAGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: FCVFRKSTPRAHVHGLRLSRRSR*PAGSRA
Trigger: CGCACGGCTCCCCGCGGGTCAGCGTGACCGACGACT...TAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGCGGTGGTCAGCGCGTTaGTGGCGGCCACGATGGCCG +
Preference number: 4 (lower is better)
Translates to: GMAFRLFLSVSETQETRLRWSAR*WRPRWP
Trigger: CGGCCATCGTGGCCGCCATCAACGCGCTGACCACCG...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp AAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTACCGGTGGTCAGCGCGTTaGTGGCGGCCACGATGGCCG +
Preference number: 4 (lower is better)
Translates to: KSTPRAHVHGLRLERWRYRWSAR*WRPRWP
Trigger: CGGCCATCGTGGCCGCCATCAACGCGCTGACCACCG...GTAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp ACGGGACATCACACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTCACCTTGAGCGCCACTaGGGGCGGCTGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: TGHHTVKCATRHAALRRRHLERH*GRLLQG
Trigger: ACCCTGGAGCAGCCGCCCTCAGTGGCGCTCAAGGTG...ACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGTGTGATGTCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCTCAGCATACCCCTGCTaGACTGAGTGCTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSSAYPC*TECSNV
Trigger: CACATTGGAGCACTCAGTTCAGCAGGGGTATGCTGA...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCGTCAGTTGGAGGTTCTaGGTGGTACCAGGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: SNCVRRENARPSEAAMDAVSWRF*VVPGVS
Trigger: ACTCACACCTGGTACCACTCAGAACCTCCAACTGAC...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCGTCAGTTGGAGGTTCTaGGTGGTACCAGGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: RLCRSARYRPFLLREPFLVSWRF*VVPGVS
Trigger: ACTCACACCTGGTACCACTCAGAACCTCCAACTGAC...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCGGTTGTTTCTTTCCGTaGGTGAGACACAAGAGACGC +
Preference number: 4 (lower is better)
Translates to: RDAIVPERTVQAVPSAGAGCFFP*VRHKRR
Trigger: GCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACC...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGGGTTGTTTCTTTCCGTaGGTGAGACACAAGAGACGC +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLGCFFP*VRHKRR
Trigger: GCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACC...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCGAGAAAGGCTGCACGTaGCTCCTACAGTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPEKGCT*LLQCRV
Trigger: CACCCGGCACTGTAGGAGTCACGTGCAGCCTTTCTC...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCTCAATGACAGTCCCCTaGGAAAGGCTGCACGTGACT +
Preference number: 4 (lower is better)
Translates to: RLCRSARYRPFLLREPFLSMTVP*ERLHVT
Trigger: AGTCACGTGCAGCCTTTCTCAGGGGACTGTCATTGA...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAGGCTGGTGCCCAGGGTaGGCCTGGGGAACCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QGIDGSVSLTGHHTVKCAGWCPG*AWGTWP
Trigger: AGGCCAGGTTCCCCAGGCTCACCCTGGGCACCAGCC...TGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp GCAGGAGTGTACGTGACAGCCCAGGAAACGTTCCAAATGTTGGAGACTCATACTCGCGGCCCTAGGACCTaGGCGGTGGCTCCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: AGVYVTAQETFQMLETHTRGPRT*AVAPSP
Trigger: AGGGCTCGGAGCCACCGCGCAGGTCCTAGGGCCGCG...AGTATGAGTCTCCAACATTTGGAACGTTTCCTGGGCTGTCACGTACACTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR GCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTGGACTGGAAAGCTGGTaGTTGGCATCCGCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIGLESW*LASARR
Trigger: CCGCCGCGCGGATGCCAAGCACCAGCTTTCCAGTCC...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR GCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTACGAGGTTATCTCGATaGGAGGACTCTCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVTRLSR*EDSPGQ
Trigger: CTGCCCTGGAGAGTCCTCGCATCGAGATAACCTCGT...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp ACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTACCGTTGGGACACGCAGGGAGACTaGCATGGCGACGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TPRAHVHGLRLERWRYRWDTQGD*HGDVWG
Trigger: CCCCCAGACGTCGCCATGGCAGTCTCCCTGCGTGTC...CCAACGGTAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR GCA 90 bp TTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCTCAGTTTTTGGGAACCCAGCAGTGTaGAGGCCCCCAGCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: FTVSSFRVQMHTRTPSVFGNPAV*RPPARG
Trigger: CCCGCGGGCTGGGGGCCTGCACACTGCTGGGTTCCC...AAAAACTGAGGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp ACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTACCGTTGGCTCCCAGGTCCAGGCTaGTGTCGGTGGTCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: TPRAHVHGLRLERWRYRWLPGPG*CRWSAR
Trigger: ACGCGCTGACCACCGACAGCAGCCTGGACCTGGGAG...CCAACGGTAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR GCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGGTCCCAATGAAAAGCTaGAGCATCAGCGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLVPMKS*SISGSF
Trigger: GAATGAGCCGCTGATGCTGCAGCTTTTCATTGGGAC...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTCCTGCAGGGACAGCGTaGGGCCGCTGGGTTGCGGGA +
Preference number: 4 (lower is better)
Translates to: LSFSGHRWLGLTNGTSHSPAGTA*GRWVAG
Trigger: TCCCGCAACCCAGCGGCCGCACGCTGTCCCTGCAGG...ACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp ATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCGGGTTGGAGGCCACCTaGAGGGACAGCGTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: ICLFTVSSFRVQMHTRTPGLEAT*RDSVRP
Trigger: CGGCCGCACGCTGTCCCTGCAGGTGGCCTCCAACCC...GGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCACCGGATAGCTGTCCGTaGTCTGCTTCTCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGAPDSCP*SASPPE
Trigger: CTCTGGTGGAGAAGCAGAGCACGGACAGCTATCCGG...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCAGAGAATTCGGCTTaGACAGGTCCCGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: QETRLCRSARYRPFLLREPENSA*TGPGQF
Trigger: AAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGG...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCCCAGAGAATTCGGCTTaGACAGGTCCCGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: SNCVRRENARPSEAAMDAPENSA*TGPGQF
Trigger: AAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGG...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGATCAGGGTGCTTCTCTaGGGACAGGGCGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLIRVLL*GQGGKP
Trigger: CGGCTTCCCGCCCTGTCCGCAGAGAAGCACCCTGAT...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATACGGTGGGTCTCCCGTaGTCAGCCCGGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: DREALLGEDTSALLLFIHTVGLP*SARPPP
Trigger: GGGAGGTGGCCGGGCTGAGCACGGGAGACCCACCGT...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGGGCGTGGGGTCAAACTaGGTGTGGGCCGTTCCCATG +
Preference number: 4 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWGVGSN*VWAVPM
Trigger: CATGGGAACGGCCCACACGCAGTTTGACCCCACGCC...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCATTGAACCCCAGGGGTaGCAGAAGGGCTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFIEPQG*QKGWAW
Trigger: CCACGCCCAGCCCTTCTGGCACCCCTGGGGTTCAAT...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGATTGAACCCCAGGGGTaGCAGAAGGGCTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLIEPQG*QKGWAW
Trigger: CCACGCCCAGCCCTTCTGGCACCCCTGGGGTTCAAT...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTATTGAACCCCAGGGGTaGCAGAAGGGCTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: GALSPSATFCSVTSQPEPIEPQG*QKGWAW
Trigger: CCACGCCCAGCCCTTCTGGCACCCCTGGGGTTCAAT...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CCCAGGGGTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCGTACACACATGCAAATaGAGGCTATCCTGTAACAGG +
Preference number: 4 (lower is better)
Translates to: PRGARRAGRGVKLRVGRSVHTCK*RLSCNR
Trigger: CCTGTTACAGGATAGCCTGCATTTGCATGTGTGTAC...GGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGGCTGACGTTGGAGGATaGATAGCCATAGTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLADVGG*IAIVFW
Trigger: CCAGAACACTATGGCTATGCATCCTCCAACGTCAGC...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318065.9
ENST00000329101.8
CDS-3UTR GCA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATCGGAGACTCGTCCCTaGGGACCGTGGACGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VIADREALLGEDTSALLLSETRP*GPWTAG
Trigger: ACCTGCCGTCCACGGTCCGCAGGGACGAGTCTCCGA...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GGCCCAGCGTCAACACTGGGGATCTCGCCCTGCGGCAGCCTGGGGGCTCTGCCTAGGGATCAAGGAAAATaGATCCGAAGCTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: GPASTLGISPCGSLGALPRDQGK*IRSFPF
Trigger: AAAAGGGAAGCTTCGGATGCATTTTCCTTGATCCCT...AGGCAGAGCCCCCAGGCTGCCGCAGGGCGAGATCCCCAGTGTTGACGCTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTACCTGCTGCTGGGATCTaGCGCGGCGACTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLPAAGI*RGDSAG
Trigger: GCCGGCGGAGTCGCCGCGCCAGATCCCAGCAGCAGG...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253506.9
ENST00000397790.6
CDS-3UTR CCA 90 bp TACGGCGACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCTGGAAAGCTGGTGCTTaGCATCCGCGCGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: YGDVVSASLEKAPHALMFWKAGA*HPRGGG
Trigger: GCCGCCGCCGCGCGGATGCCAAGCACCAGCTTTCCA...GAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp GATGAAGTTACCCCTGGAGAAGTGTCTCGGGGACGTCCGCCCAGCACAAAGCTCAAGGGACTGGAAAGCTaGTGCTTGGCATCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: DEVTPGEVSRGRPPSTKLKGLES*CLASAR
Trigger: CCGCGCGGATGCCAAGCACCAGCTTTCCAGTCCCTT...GAGCTTTGTGCTGGGCGGACGTCCCCGAGACACTTCTCCAGGGGTAACTTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTGGCCAAGTGGAAACTTaGAAGGGACTGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLGQVET*KGLESW
Trigger: CCAGCTTTCCAGTCCCTTCCAAGTTTCCACTTGGCC...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CCA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGTCCACCTCCACATCGTaGAAAAACTGGTTATTGTTG +
Preference number: 4 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTSTSTS*KNWLLL
Trigger: CAACAATAACCAGTTTTTCCACGATGTGGAGGTGGA...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACTGGGCAGACTCAGCGTaGCCGTGGAGGGGGACCGTT +
Preference number: 4 (lower is better)
Translates to: FLSVSETQETRLCRSARYWADSA*PWRGTV
Trigger: AACGGTCCCCCTCCACGGCCACGCTGAGTCTGCCCA...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp CAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAGGGAGGACAGGCTGCTaGCCGGGCTCAGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: QGIDGSVSLTGHHTVKCAGRTGC*PGSGTR
Trigger: CCTCGTGCCTGAGCCCGGCCAGCAGCCTGTCCTCCC...TGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACCGTGCGGGGACGGCGTaGGCGAGTGGTGGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: VVSASLEKAPHALMFTAYRAGTA*ASGGVS
Trigger: ACTCACCCCACCACTCGCCCACGCCGTCCCCGCACG...GTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp ACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTCCACGATGGCCGAGCTaGTGTACTGGGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: TVQAVPSAGALSPSATFCPRWPS*CTGWCC
Trigger: GCAACACCACCCAGTACACCAGCTCGGCCATCGTGG...ACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCCCACGATGGCCGAGCTaGTGTACTGGGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: GSPFSISDVLFSDFTAGAPRWPS*CTGWCC
Trigger: GCAACACCACCCAGTACACCAGCTCGGCCATCGTGG...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp AAAGATGGCGTTACCGTTGGCGGGAAGGTAGGTGAAACGCTGGTACTGGCTTCGGGCACCGCCAGGTACTaGTCGCAGAAGCCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: KDGVTVGGKVGETLVLASGTARY*SQKPPF
Trigger: GAAGGGCGGCTTCTGCGACCAGTACCTGGCGGTGCC...CGAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCAACGGTAACGCCATCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTCATACGGGCCTGAGTaGGACGGCAGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQSYGPE*DGSCQS
Trigger: GGACTGGCAGCTGCCGTCCCACTCAGGCCCGTATGA...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AAGCTGCAGCATCAGCGGCTCATTCTCCAAGTAGCCATGCAGCTGCACGATGGGTCATACGGGCCTGAGTaGGACGGCAGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: KLQHQRLILQVAMQLHDGSYGPE*DGSCQS
Trigger: GGACTGGCAGCTGCCGTCCCACTCAGGCCCGTATGA...CCCATCGTGCAGCTGCATGGCTACTTGGAGAATGAGCCGCTGATGCTGCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTCATGCAGCTGCACGATaGGGTGTCCTCCGGCCGACG +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIHAAAR*GVLRPT
Trigger: CGTCGGCCGGAGGACACCCCATCGTGCAGCTGCATG...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTGGCCTCGTGGCTGGTaGTGGACACGGTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFWPRGW*WTRSSL
Trigger: CAGGGAAGACCGTGTCCACCACCAGCCACGAGGCCA...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGGGATGGCCTCGTGGCTaGTGGTGGACACGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLGWPRG*WWTRSS
Trigger: GGAAGACCGTGTCCACCACCAGCCACGAGGCCATCC...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GCTGAACTGAGTGCTCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGGATGGCCTCGTGGCTaGTGGTGGACACGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: AELSAPMWQLGVGARAGEGWPRG*WWTRSS
Trigger: GGAAGACCGTGTCCACCACCAGCCACGAGGCCATCC...CTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGAGCACTCAGTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
ENST00000590313.5
CDS-3UTR CCA 90 bp GATGGCGTTACCGTTGGCGGGAAGGTAGGTGAAACGCTGGTACTGGCTTCGCTTGAGAGGATGGCCTCGTaGCTGGTGGTGGACACGGTC +
Preference number: 4 (lower is better)
Translates to: DGVTVGGKVGETLVLASLERMAS*LVVDTV
Trigger: GACCGTGTCCACCACCAGCCACGAGGCCATCCTCTC...AAGCGAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCAACGGTAACGCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTGGTGTTGGAGAGGATaGCCTCGTGGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPWCWRG*PRGWWW
Trigger: CCACCACCAGCCACGAGGCCATCCTCTCCAACACCA...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTGGTGTTGGAGAGGATaGCCTCGTGGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TVQAVPSAGALSPSATFCWCWRG*PRGWWW
Trigger: CCACCACCAGCCACGAGGCCATCCTCTCCAACACCA...ACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCGGATCTCCAGGACTTTaGTGTTGGAGAGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSGSPGL*CWRGWP
Trigger: AGGCCATCCTCTCCAACACCAAAGTCCTGGAGATCC...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCGCTGGGAGCATTCGATaGGGTTGGAGGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPAGSIR*GWRPPA
Trigger: TGCAGGTGGCCTCCAACCCCATCGAATGCTCCCAGC...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGTCCTGCAGGAAGTTGTaGCCAGACAGGACCATCTTC +
Preference number: 4 (lower is better)
Translates to: QETRLCRSARYRPFLLRESCRKL*PDRTIF
Trigger: GAAGATGGTCCTGTCTGGCCACAACTTCCTGCAGGA...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCTCTGATTCCGAAATaGCGGGATCTCAACCACCAG +
Preference number: 4 (lower is better)
Translates to: QETRLCRSARYRPFLLREPLIPK*RDLNHQ
Trigger: CTGGTGGTTGAGATCCCGCCATTTCGGAATCAGAGG...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGGTGAAACGCTGGTACTaGCTTCGCTTTCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: QETRLCRSARYRPFLLREVKRWY*LRFLFP
Trigger: CGGGAAGAGAAAGCGAAGCCAGTACCAGCGTTTCAC...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCGTGAAACGCTGGTACTaGCTTCGCTTTCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: SNCVRRENARPSEAAMDAVKRWY*LRFLFP
Trigger: CGGGAAGAGAAAGCGAAGCCAGTACCAGCGTTTCAC...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCACCGGTCCACAGGTTaGAGCAGGCTCATAATCATC +
Preference number: 4 (lower is better)
Translates to: QETRLCRSARYRPFLLREHRSTG*SRLIII
Trigger: GATGATTATGAGCCTGCTCCAACCTGTGGACCGGTG...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCACCGGTCCACAGGTTaGAGCAGGCTCATAATCATC +
Preference number: 4 (lower is better)
Translates to: AIVPERTVQAVPSAGALSHRSTG*SRLIII
Trigger: GATGATTATGAGCCTGCTCCAACCTGTGGACCGGTG...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACCAGAGAATTCGGCTTGCACAGGTCCCGGTCAGTTTTCGCTTCCATCTCCCAGCACGCCAGGGGCCGCTaGCATCAGGGTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TREFGLHRSRSVFASISQHARGR*HQGASL
Trigger: CAGAGAAGCACCCTGATGCCAGCGGCCCCTGGCGTG...CTGGGAGATGGAAGCGAAAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTAAAGGTCGTGGAGCTTaGGGCTCACGCCAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIKGRGA*GSRQGP
Trigger: CGGCCCCTGGCGTGAGCCCCAAGCTCCACGACCTTT...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTAGACAGTGGCCCGGGCTaGCAACGCCCTTGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: VIADREALLGEDTSALLLDSGPG*QRPWCR
Trigger: CCTACACCAAGGGCGTTGCCAGCCCGGGCCACTGTC...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCATTTCATTTACTGCTGTaGCAGCAGGGCCGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGAFHLLL*QQGRGW
Trigger: CCACCCCCGGCCCTGCTGCCACAGCAGTAAATGAAA...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
CDS-3UTR CCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCTGAGTGCTCCAATGTaGCAACTAGGAGTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLLSAPM*QLGVGA
Trigger: AGCACCCACTCCTAGTTGCCACATTGGAGCACTCAG...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGTGCTTTCCTTCTTGTTaGAGAGCCAATCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTCFPSC*RANLCT
Trigger: TGTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCA...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTCTCCAGGTGACACAGTaGTCTCCCTTCCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSLQVTQ*SPFLPA
Trigger: AGCAGGGAGGAAGGGAGACCACTGTGTCACCTGGAG...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGCAGAAGGGCTGGGCGTaGGGTCAAACTGCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TFCSVTSQPEPPPAGAIQQKGWA*GQTACG
Trigger: CCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTG...CTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTAGGGTGCCAGAAGGGCTaGGCGTGGGGTCAAACTGCG +
Preference number: 4 (lower is better)
Translates to: VIADREALLGEDTSALLLGCQKG*AWGQTA
Trigger: CGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCC...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCCGTCCGAGGCGGCGATaGACGCCAGCAAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFRPRRR*TPARAA
Trigger: CGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGTGCAGACCGACGGGATaGCCTTCAGGTTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLCRPTG*PSGCFF
Trigger: AAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCA...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGGGGGCAGCTACTGCTTaGAGGCGCACTCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLGAATA*RRTHLL
Trigger: CAGCAGGTGAGTGCGCCTCCAAGCAGTAGCTGCCCC...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGTCGGCTCTTGGGTaGCAGGCGGGAGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: FLSVSETQETRLCRSARYRSALG*QAGVEE
Trigger: CTCCTCCACTCCCGCCTGCCACCCAAGAGCCGACCT...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACCAGAGAATTCGGCTTGCACAGGTCCCGGTCAGTTTTCGCTTCCATCTCCCAGAGGCAGGTCGGCTCTTaGGTGGCAGGCGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: TREFGLHRSRSVFASISQRQVGS*VAGGSG
Trigger: TCCACTCCCGCCTGCCACCCAAGAGCCGACCTGCCT...CTGGGAGATGGAAGCGAAAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTACGTCCCTGCGGACCGTaGACGGCAGGTGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLRPCGP*TAGAAG
Trigger: GCCCGCAGCACCTGCCGTCCACGGTCCGCAGGGACG...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp TTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTCTGTGGCCACGGTCCTaGGGGCCGCCACCTCCCACC +
Preference number: 4 (lower is better)
Translates to: FPFQGIDGSVSLTGHHTVLWPRS*GPPPPT
Trigger: GGTGGGAGGTGGCGGCCCCCAGGACCGTGGCCACAG...AACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR TCA 90 bp GTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACCCCGGTGTGGAGGTCTaGAGGTTGTGGCACGGGGCC +
Preference number: 4 (lower is better)
Translates to: VVSASLEKAPHALMFTAYPGVEV*RLWHGA
Trigger: GGCCCCGTGCCACAACCTTCAGACCTCCACACCGGG...GTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp TTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCTCAGTTTTTCCGTACCCCGAGGGGTaGTCCGCCGGCGGGATGATG +
Preference number: 4 (lower is better)
Translates to: FTVSSFRVQMHTRTPSVFPYPEG*SAGGMM
Trigger: CATCATCCCGCCGGCGGATCACCCCTCGGGGTACGG...AAAAACTGAGGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp GCTGCTTTACGGCGACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTGCGGCTGCCGGCCGTTaGGGCTGTACTTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: AALRRRRFCVFRKSTPRAAAAGR*GCTSSC
Trigger: ACAAGAGGAAGTACAGCCTCAACGGCCGGCAGCCGC...AGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCGTAAAGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGAGTCGTCGGTCACGCTaGCCCGCGGGGAGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRSRRSR*PAGSRA
Trigger: CGCACGGCTCCCCGCGGGTCAGCGTGACCGACGACT...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATCACCTTGAGCGCCACTaGGGGCGGCTGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: DREALLGEDTSALLLFIHHLERH*GRLLQG
Trigger: ACCCTGGAGCAGCCGCCCTCAGTGGCGCTCAAGGTG...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACAAGCTCATACGGGCCTaGGTGGGACGGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: FLSVSETQETRLCRSARYKLIRA*VGRQLP
Trigger: TGGCAGCTGCCGTCCCACTCAGGCCCGTATGAGCTT...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GATGGCGTTACCGTTGGCGGGAAGGTAGGTGAAACGCTGGTACTGGCTTCGCTTCGTCCGCCGTCCCAATaGAAAGCTGCAGCATCAGCG +
Preference number: 4 (lower is better)
Translates to: DGVTVGGKVGETLVLASLRPPSQ*KAAASA
Trigger: CGCTGATGCTGCAGCTTTTCATTGGGACGGCGGACG...AAGCGAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCAACGGTAACGCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCAATGTCGGAGTTTCTaGGTTTCAGGATTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: RLCRSARYRPFLLREPFLQCRSF*VSGFRH
Trigger: GTGCCGGAATCCTGAAACTCAGAAACTCCGACATTG...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCCTGGGTTGCGGGACGTaGACGCGGAACACCAGCCGT +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFLGCGT*TRNTSR
Trigger: ACGGCTGGTGTTCCGCGTTCACGTCCCGCAACCCAG...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR TCA 90 bp ACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTCGTTTCTGCGTCCTGGGTTGCGGGACGTaGACGCGGAACACCAGCCGT +
Preference number: 4 (lower is better)
Translates to: TVKCATRHAALRRRRFCVLGCGT*TRNTSR
Trigger: ACGGCTGGTGTTCCGCGTTCACGTCCCGCAACCCAG...GACGCAGAAACGACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTAGGCAGCTCCTGAGCTaGGCGCTGGGAGCATTCGAT +
Preference number: 4 (lower is better)
Translates to: GALSPSATFCSVTSQPEPRQLLS*ALGAFD
Trigger: ATCGAATGCTCCCAGCGCTCAGCTCAGGAGCTGCCT...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GAAGTTGTGGCCAGACAGGACCATCTTCTTCCCGCCCACGACCGGATAGCTGTCTGGCGGGAAGGTAGGTaGAACGCTGGTACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: EVVARQDHLLPAHDRIAVWREGR*NAGTGF
Trigger: GAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCA...GACAGCTATCCGGTCGTGGGCGGGAAGAAGATGGTCCTGTCTGGCCACAACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR TCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTATACCCCTGCTGAACTaGGTGCTCCAATGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGIPLLN*VLQCGN
Trigger: GTTGCCACATTGGAGCACTCAGTTCAGCAGGGGTAT...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTCAGCATACCCCTGCTaGACTGAGTGCTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGSAYPC*TECSNV
Trigger: CACATTGGAGCACTCAGTTCAGCAGGGGTATGCTGA...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAAGGCACTTCCAGTATTaGACCCCAGGGGTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGARHFQY*TPGVPE
Trigger: TTCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCT...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGGATGCCGGTTATTGCTaGCAGGGAAGCCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLDAGYC*QGSPPG
Trigger: CCCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATC...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTGATGCCGGTTATTGCTaGCAGGGAAGCCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GALSPSATFCSVTSQPEPDAGYC*QGSPPG
Trigger: CCCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATC...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCACACAACGCAGGGCTaGGCATTAAAGTGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: AIVPERTVQAVPSAGALSHTTQG*ALKWRF
Trigger: AAAACGCCACTTTAATGCTCAGCCCTGCGTTGTGTG...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTGGTTGTTTCTTTCCGTaGGTGAGACACAAGAGACGC +
Preference number: 4 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLGCFFP*VRHKRR
Trigger: GCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACC...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTGAGAAAGGCTGCACGTaGCTCCTACAGTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: GALSPSATFCSVTSQPEPEKGCT*LLQCRV
Trigger: CACCCGGCACTGTAGGAGTCACGTGCAGCCTTTCTC...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAATCAATGACAGTCCCCTaGGAAAGGCTGCACGTGACT +
Preference number: 4 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKSMTVP*ERLHVT
Trigger: AGTCACGTGCAGCCTTTCTCAGGGGACTGTCATTGA...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCACGCTGGGCACAATGCTaGGAGGGGAGCCGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: QGIDGSVSLTGHHTVKCARWAQC*EGSRGQ
Trigger: TTGGCCCCGGCTCCCCTCTCAGCATTGTGCCCAGCG...TGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCGTGCCCGCGCCCTGCTaGTGGGATCTGGCGCGGCGA +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGVPAPC*WDLARR
Trigger: TCGCCGCGCCAGATCCCAGCAGCAGGGCGCGGGCAC...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR GCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCGGACTGGAAAGCTGGTaGTTGGCATCCGCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFGLESW*LASARR
Trigger: CCGCCGCGCGGATGCCAAGCACCAGCTTTCCAGTCC...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR GCA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCGCTGACGTTGGAGGATaGATAGCCATAGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: RDAIVPERTVQAVPSAGAADVGG*IAIVFF
Trigger: GAAGAACACTATGGCTATGCATCCTCCAACGTCAGC...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253506.9
ENST00000427363.7
CDS-3UTR GCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCCCCACCGTCCAAAGCTaGTCCGTACCCCGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFPTVQS*SVPRGV
Trigger: CACCCCTCGGGGTACGGAGCAGCTTTGGACGGTGGG...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp TACGGCGACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCCCCACCGTCCAAAGCTaGTCCGTACCCCGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: YGDVVSASLEKAPHALMFPTVQS*SVPRGV
Trigger: CACCCCTCGGGGTACGGAGCAGCTTTGGACGGTGGG...GAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR GCA 90 bp ACGGGACATCACACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTCTCCCAGGTCCAGGCTaGTGTCGGTGGTCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: TGHHTVKCATRHAALRRRLPGPG*CRWSAR
Trigger: ACGCGCTGACCACCGACAGCAGCCTGGACCTGGGAG...ACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGTGTGATGTCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp CTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTGCCACTGAGGGCGGCTaGTCCAGGGTGGTCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LSFSGHRWLGLTNGTSHSATEGG*SRVVLR
Trigger: CCGCAAGACCACCCTGGAGCAGCCGCCCTCAGTGGC...ACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTAGAGTGGGACGGCAGCTaGCAGTCCAGGGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLEWDGS*QSRAGR
Trigger: CCTGCCCGCCCTGGACTGGCAGCTGCCGTCCCACTC...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
ENST00000590313.5
CDS-3UTR GCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTACCTGCAGGGACAGCGTaGGGCCGCTGGGTTGCGGGA +
Preference number: 4 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLPAGTA*GRWVAG
Trigger: TCCCGCAACCCAGCGGCCGCACGCTGTCCCTGCAGG...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
ENST00000590313.5
CDS-3UTR GCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTATGACCTTGGAGTCCTaGAGGAAGTTGTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGMTLES*RKLWPD
Trigger: GTCTGGCCACAACTTCCTGCAGGACTCCAAGGTCAT...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AAAGCTGCAGCATCAGCGGCTCATTCTCCAAGTAGCCATGCAGCTGCACGATGGATCAGGGTGCTTCTCTaGGGACAGGGCGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: KAAASAAHSPSSHAAARWIRVLL*GQGGKP
Trigger: CGGCTTCCCGCCCTGTCCGCAGAGAAGCACCCTGAT...CCATCGTGCAGCTGCATGGCTACTTGGAGAATGAGCCGCTGATGCTGCAGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR GCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTGGCGTGGGGTCAAACTaGGTGTGGGCCGTTCCCATG +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIGVGSN*VWAVPM
Trigger: CATGGGAACGGCCCACACGCAGTTTGACCCCACGCC...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCAGGTTCCAAAACGGATaGCGGTTATTGCTGACAGGG +
Preference number: 4 (lower is better)
Translates to: RLCRSARYRPFLLREPFLRFQNG*RLLLTG
Trigger: CCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCT...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGAGGTTCCAAAACGGATaGCGGTTATTGCTGACAGGG +
Preference number: 4 (lower is better)
Translates to: SNCVWAVPMKGPCTVGLPRFQNG*RLLLTG
Trigger: CCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCT...CGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTGGGTCCTCCTCGAACTaGGTGAGACGAGAAAATGCA +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGGSSSN*VRRENA
Trigger: TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCC...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTGACAGGACGGCCGGCTaGCAGGTGGGGTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: LSFSGHRWLGLTNGTSHSDRTAG*QVGCGL
Trigger: CAGTCCACACCCCACCTGGCAGCCGGCCGTCCTGTC...ACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp ACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGAAGGGACTGGAAAGCTaGTGCTTGGCATCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: TFCSVTSQPEPPPAGAIQKGLES*CLASAR
Trigger: CCGCGCGGATGCCAAGCACCAGCTTTCCAGTCCCTT...CTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CCA 90 bp TACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACAGACTCAGCGTGGCCGTaGAGGGGGACCGTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: YVQTDGMAFRLFLSVSETDSAWP*RGTVWS
Trigger: GCTCCAAACGGTCCCCCTCCACGGCCACGCTGAGTC...TGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCTGGGCAGACTCAGCGTaGCCGTGGAGGGGGACCGTT +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFWADSA*PWRGTV
Trigger: AACGGTCCCCCTCCACGGCCACGCTGAGTCTGCCCA...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp CGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTGGGCAGACTCAGCGTaGCCGTGGAGGGGGACCGTT +
Preference number: 4 (lower is better)
Translates to: RFCVFRKSTPRAHVHGLRWADSA*PWRGTV
Trigger: AACGGTCCCCCTCCACGGCCACGCTGAGTCTGCCCA...CCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp TGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAGGGAGGACAGGCTGCTaGCCGGGCTCAGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: CVFRKSTPRAHVHGLRLEGRTGC*PGSGTR
Trigger: CCTCGTGCCTGAGCCCGGCCAGCAGCCTGTCCTCCC...TTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCATGCCATGGCGACGTCTaGGGGGACGCGTACGGGTAC +
Preference number: 4 (lower is better)
Translates to: TAPGFLGSSSNCVRRENACHGDV*GDAYGY
Trigger: GTACCCGTACGCGTCCCCCCAGACGTCGCCATGGCA...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp ACGGGACATCACACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTTGCCATGGCGACGTCTaGGGGGACGCGTACGGGTAC +
Preference number: 4 (lower is better)
Translates to: TGHHTVKCATRHAALRRRCHGDV*GDAYGY
Trigger: GTACCCGTACGCGTCCCCCCAGACGTCGCCATGGCA...ACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGTGTGATGTCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCGGCACCGCCAGGTACTaGTCGCAGAAGCCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFGTARY*SQKPPF
Trigger: GAAGGGCGGCTTCTGCGACCAGTACCTGGCGGTGCC...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCACATGCAGCTGCACGATaGGGTGTCCTCCGGCCGACG +
Preference number: 4 (lower is better)
Translates to: TAPGFLGSSSNCVRRENAHAAAR*GVLRPT
Trigger: CGTCGGCCGGAGGACACCCCATCGTGCAGCTGCATG...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATGGCCTCGTGGCTGGTaGTGGACACGGTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: VIADREALLGEDTSALLLWPRGW*WTRSSL
Trigger: CAGGGAAGACCGTGTCCACCACCAGCCACGAGGCCA...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTGGATGGCCTCGTGGCTaGTGGTGGACACGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIGWPRG*WWTRSS
Trigger: GGAAGACCGTGTCCACCACCAGCCACGAGGCCATCC...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACGGATGGCCTCGTGGCTaGTGGTGGACACGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: FLSVSETQETRLCRSARYGWPRG*WWTRSS
Trigger: GGAAGACCGTGTCCACCACCAGCCACGAGGCCATCC...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATGGATCTCCAGGACTTTaGTGTTGGAGAGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHGSPGL*CWRGWP
Trigger: AGGCCATCCTCTCCAACACCAAAGTCCTGGAGATCC...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAACAGCGTGCGGCCGCTaGGTTGCGGGACGTGAACGC +
Preference number: 4 (lower is better)
Translates to: QGIDGSVSLTGHHTVKCATACGR*VAGRER
Trigger: GCGTTCACGTCCCGCAACCCAGCGGCCGCACGCTGT...TGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCAGCATTCGATGGGGTTaGAGGCCACCTGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: GSPFSISDVLFSDFTAGASIRWG*RPPAGT
Trigger: TGTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCT...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGGCTGGGAGCATTCGATaGGGTTGGAGGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWAGSIR*GWRPPA
Trigger: TGCAGGTGGCCTCCAACCCCATCGAATGCTCCCAGC...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GCTGAACTGAGTGCTCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGCTGGGAGCATTCGATaGGGTTGGAGGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: AELSAPMWQLGVGARAGEAGSIR*GWRPPA
Trigger: TGCAGGTGGCCTCCAACCCCATCGAATGCTCCCAGC...CTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGAGCACTCAGTTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
ENST00000590313.5
CDS-3UTR CCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTCCTGCAGGAAGTTGTaGCCAGACAGGACCATCTTC +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGSCRKL*PDRTIF
Trigger: GAAGATGGTCCTGTCTGGCCACAACTTCCTGCAGGA...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATCCTCTGATTCCGAAATaGCGGGATCTCAACCACCAG +
Preference number: 4 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHPLIPK*RDLNHQ
Trigger: CTGGTGGTTGAGATCCCGCCATTTCGGAATCAGAGG...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCAAAGGTCGTGGAGCTTaGGGCTCACGCCAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFKGRGA*GSRQGP
Trigger: CGGCCCCTGGCGTGAGCCCCAAGCTCCACGACCTTT...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp TACAACTGGTCCAACTCTTCAGGCTCTCGCTTGACCGTTACAGGAATAGGGGCCAAAGGTCGTGGAGCTTaGGGCTCACGCCAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: YNWSNSSGSRLTVTGIGAKGRGA*GSRQGP
Trigger: CGGCCCCTGGCGTGAGCCCCAAGCTCCACGACCTTT...GGCCCCTATTCCTGTAACGGTCAAGCGAGAGCCTGAAGAGTTGGACCAGTTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp ACCACCAGAGAATTCGGCTTGCACAGGTCCCGGTCAGTTTTCGCTTCCATCTCCGCGGGAGAAAGGTCGTaGAGCTTGGGGCTCACGCCA +
Preference number: 4 (lower is better)
Translates to: TTREFGLHRSRSVFASISAGERS*SLGLTP
Trigger: TGGCGTGAGCCCCAAGCTCCACGACCTTTCTCCCGC...GGAGATGGAAGCGAAAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTACAGAAGGGCTGGGCGTaGGGTCAAACTGCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: VIADREALLGEDTSALLLQKGWA*GQTACG
Trigger: CCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTG...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCACAGGGAAGCCCTCCTaGGCGAGGACACGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFTGKPS*ARTRRL
Trigger: GAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGT...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCGTACCCAGCCGCAGGTaGGACGCGGCCACACGTCTT +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFVPSRR*DAATRL
Trigger: AAGACGTGTGGCCGCGTCCCACCTGCGGCTGGGTAC...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCACCGGCTTCATGCTGTaGCCACGGTCCTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: ICLFTVSSFRVQMHTRTPTGFML*PRSWGP
Trigger: CGGCCCCCAGGACCGTGGCCACAGCATGAAGCCGGT...GGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp ACGGGACATCACACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTCCATGCTGGAGCAGATaGGGGGTGGAGGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: TGHHTVKCATRHAALRRRPCWSR*GVEGAA
Trigger: GGCTGCACCCTCCACCCCCCATCTGCTCCAGCATGG...ACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGTGTGATGTCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR TCA 90 bp GCAGGAGTGTACGTGACAGCCCAGGAAACGTTCCAAATGTTGGAGACTCATACTGATCCGCCGGCGGGATaGTGCCCGGTGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: AGVYVTAQETFQMLETHTDPPAG*CPVWRS
Trigger: AGACCTCCACACCGGGCATCATCCCGCCGGCGGATC...AGTATGAGTCTCCAACATTTGGAACGTTTCCTGGGCTGTCACGTACACTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCCCGTACCCCGAGGGGTaGTCCGCCGGCGGGATGATG +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGPYPEG*SAGGMM
Trigger: CATCATCCCGCCGGCGGATCACCCCTCGGGGTACGG...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp TTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTCGGTGGTCAGCGCGTTaGTGGCGGCCACGATGGCCG +
Preference number: 4 (lower is better)
Translates to: FQGIDGSVSLTGHHTVKCRWSAR*WRPRWP
Trigger: CGGCCATCGTGGCCGCCATCAACGCGCTGACCACCG...ACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp TGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAACACCTTGAGCGCCACTaGGGGCGGCTGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: CVFRKSTPRAHVHGLRLEHLERH*GRLLQG
Trigger: ACCCTGGAGCAGCCGCCCTCAGTGGCGCTCAAGGTG...TTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp GCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTACCGTTGGCGGGAAGGTAAGCTCATACGGGCCTaGGTGGGACGGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: AHVHGLRLERWRYRWREGKLIRA*VGRQLP
Trigger: TGGCAGCTGCCGTCCCACTCAGGCCCGTATGAGCTT...ACCTTCCCGCCAACGGTAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACCGTCCGCCGTCCCAATaGAAAGCTGCAGCATCAGCG +
Preference number: 4 (lower is better)
Translates to: FLSVSETQETRLCRSARYRPPSQ*KAAASA
Trigger: CGCTGATGCTGCAGCTTTTCATTGGGACGGCGGACG...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTCAATGTCGGAGTTTCTaGGTTTCAGGATTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVQCRSF*VSGFRH
Trigger: GTGCCGGAATCCTGAAACTCAGAAACTCCGACATTG...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTAAGGCAGCTCCTGAGCTaGGCGCTGGGAGCATTCGAT +
Preference number: 4 (lower is better)
Translates to: VIADREALLGEDTSALLLRQLLS*ALGAFD
Trigger: ATCGAATGCTCCCAGCGCTCAGCTCAGGAGCTGCCT...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCAGCTCCTGAGCTaGGCGCTGGGAGCATTCGAT +
Preference number: 4 (lower is better)
Translates to: FLSVSETQETRLCRSARYRQLLS*ALGAFD
Trigger: ATCGAATGCTCCCAGCGCTCAGCTCAGGAGCTGCCT...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGCGGGAGTCCGAGGTaGCAGTGGCCCGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRCGSPR*QWPGLA
Trigger: TGCCAGCCCGGGCCACTGTCACCTCGGACTCCCGCA...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR TCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCAAAGTCTTTGTCTGCTaGAGTCAGCATACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RLCRSARYRPFLLREPFLKVFVC*SQHTPA
Trigger: AGCAGGGGTATGCTGACTTCAGCAGACAAAGACTTT...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAATCCCTTCTGTTGTCATaGGATGACTTCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKSLLLS*DDFSSR
Trigger: CCTGGAGGAGAAGTCATCTCATGACAACAGAAGGGA...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCTGTCCAGTAACCTATTaGTGTGCTATTCAAGTTACT +
Preference number: 4 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAACPVTY*CAIQVT
Trigger: AGTAACTTGAATAGCACATCAATAGGTTACTGGACA...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCGACGTTCTGTTCAGTaGCTTCACAGCCGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLRRSVQ*LHSRSL
Trigger: GAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCG...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGCGACGTTCTGTTCAGTaGCTTCACAGCCGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: TFCSVTSQPEPPPAGAIQRRSVQ*LHSRSL
Trigger: GAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCG...CTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTGTTTCTTTCCGTGAGTaGGACACAAGAGACGCGATT +
Preference number: 4 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLVSFRE*DTRDAI
Trigger: AATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAAC...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCGTTTCTTTCCGTGAGTaGGACACAAGAGACGCGATT +
Preference number: 4 (lower is better)
Translates to: SNCVRRENARPSEAAMDAVSFRE*DTRDAI
Trigger: AATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAAC...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTACGTTTCCTTTTCAATaGCAGTCCCCTGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: AIVPERTVQAVPSAGALSTFPFQ*QSPEKG
Trigger: GCCTTTCTCAGGGGACTGTCATTGAAAAGGAAACGT...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGACTGGAAAGCTGGTaGTTGGCATCCGCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: VVSASLEKAPHALMFTAYGLESW*LASARR
Trigger: CCGCCGCGCGGATGCCAAGCACCAGCTTTCCAGTCC...GTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR GCA 90 bp TTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACGGACTGGAAAGCTGGTaGTTGGCATCCGCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: FLSFSGHRWLGLTNGTSHGLESW*LASARR
Trigger: CCGCCGCGCGGATGCCAAGCACCAGCTTTCCAGTCC...GTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp CAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCACCCACCGTCCAAAGCTaGTCCGTACCCCGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: QGIDGSVSLTGHHTVKCAPTVQS*SVPRGV
Trigger: CACCCCTCGGGGTACGGAGCAGCTTTGGACGGTGGG...TGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp TTATTTAACAACCACACTGACAGTGGCCTCGAGGTAGGCCCAGCGTCAACACTGGACACGCAGGGAGACTaGCATGGCGACGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LFNNHTDSGLEVGPASTLDTQGD*HGDVWG
Trigger: CCCCCAGACGTCGCCATGGCAGTCTCCCTGCGTGTC...CAGTGTTGACGCTGGGCCTACCTCGAGGCCACTGTCAGTGTGGTTGTTAAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTGTACTGGGTGGTGTTaGCCAACCACGAGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFCTGWC*PTTSRR
Trigger: CCGACGACTCGTGGTTGGGCAACACCACCCAGTACA...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGGAGTGGGACGGCAGCTaGCAGTCCAGGGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: INVQLLAFSQLEVLSGTREWDGS*QSRAGR
Trigger: CCTGCCCGCCCTGGACTGGCAGCTGCCGTCCCACTC...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR GCA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGTCCCAATGAAAAGCTaGAGCATCAGCGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKVPMKS*SISGSF
Trigger: GAATGAGCCGCTGATGCTGCAGCTTTTCATTGGGAC...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCCCTGCAGGGACAGCGTaGGGCCGCTGGGTTGCGGGA +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGPAGTA*GRWVAG
Trigger: TCCCGCAACCCAGCGGCCGCACGCTGTCCCTGCAGG...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TCACCGGTCCACAGGTTGGAGCAGGCTCATAATCATCAGTGGGTTCTGTTTTTAGGGTTGGAGGCCACCTaGAGGGACAGCGTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: SPVHRLEQAHNHQWVLFLGLEAT*RDSVRP
Trigger: CGGCCGCACGCTGTCCCTGCAGGTGGCCTCCAACCC...TAAAAACAGAACCCACTGATGATTATGAGCCTGCTCCAACCTGTGGACCGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR GCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCCGGATAGCTGTCCGTaGTCTGCTTCTCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLPDSCP*SASPPE
Trigger: CTCTGGTGGAGAAGCAGAGCACGGACAGCTATCCGG...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCACCAGAGAATTCGGCTTaGACAGGTCCCGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGAPENSA*TGPGQF
Trigger: AAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGG...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCAATTGAACCCCAGGGGTaGCAGAAGGGCTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: TAPGFLGSSSNCVRRENAIEPQG*QKGWAW
Trigger: CCACGCCCAGCCCTTCTGGCACCCCTGGGGTTCAAT...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGACAAAGATGCGAGCATaGGACTATGAACAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: ENARPSEAAMDASKSSDWTKMRA*DYEQAY
Trigger: GTAGGCTTGTTCATAGTCGCATGCTCGCATCTTTGT...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACGTGAGACGAGAAAATaGACGGCCGTCCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: YVQTDGMAFRLFLSVSETRETRK*TAVRGG
Trigger: GCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACG...TGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGACTAATTGTACAGAGTaGCCAGCAAGGCCTACACAA +
Preference number: 4 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLETNCTE*PARPTQ
Trigger: TTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGT...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCGCCTCCACCCGCAGGTaGAATTCAGGCAGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFASTRR*NSGRFH
Trigger: ATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGC...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGGCCTCCACCCGCAGGTaGAATTCAGGCAGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLASTRR*NSGRFH
Trigger: ATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGC...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTACAAGAGACGCGATTGTaGCGGAGCGCACGGTACAGG +
Preference number: 4 (lower is better)
Translates to: VIADREALLGEDTSALLLQETRL*RSARYR
Trigger: CCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTGCAGCCTGGGGGCTCTaGCTGAGGGGCTCACAGTCT +
Preference number: 4 (lower is better)
Translates to: LSFSGHRWLGLTNGTSHSAAWGL*LRGSQS
Trigger: AGACTGTGAGCCCCTCAGGCAGAGCCCCCAGGCTGC...ACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp ATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAACACGCTGGAAAGCTGGTGCTTaGCATCCGCGCGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: IDGSVSLTGHHTVKCATRWKAGA*HPRGGG
Trigger: GCCGCCGCCGCGCGGATGCCAAGCACCAGCTTTCCA...GCGTGTTGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCAACTGGTTATTGTTGTaGTACAGGCCCAAGCACGAG +
Preference number: 4 (lower is better)
Translates to: RLCRSARYRPFLLREPFLNWLLL*YRPKHE
Trigger: CTCGTGCTTGGGCCTGTACCACAACAATAACCAGTT...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATGACTCAGCGTGGCCGTaGAGGGGGACCGTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: DREALLGEDTSALLLFIHDSAWP*RGTVWS
Trigger: GCTCCAAACGGTCCCCCTCCACGGCCACGCTGAGTC...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp CTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTGTAGGCCTCCAGGCTaGGCAGACTCAGCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LSFSGHRWLGLTNGTSHSCRPPG*ADSAWP
Trigger: CGGCCACGCTGAGTCTGCCCAGCCTGGAGGCCTACA...ACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCGGGAGGACAGGCTGCTaGCCGGGCTCAGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGGRTGC*PGSGTR
Trigger: CCTCGTGCCTGAGCCCGGCCAGCAGCCTGTCCTCCC...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCACGGGTACGAGTAGTTaGACTCGTAGGAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPTGTSS*TRRRRP
Trigger: AGGCCTCCTCCTACGAGTCCAACTACTCGTACCCGT...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp CCAGCCTGGATGCCCGTGGTCCCAGGAGATGAAGTTACCCCTGGAGAAGTGTCTACGGGTACGAGTAGTTaGACTCGTAGGAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PAWMPVVPGDEVTPGEVSTGTSS*TRRRRP
Trigger: AGGCCTCCTCCTACGAGTCCAACTACTCGTACCCGT...AGACACTTCTCCAGGGGTAACTTCATCTCCTGGGACCACGGGCATCCAGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp AAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTACTGCCATGGCGACGTCTaGGGGGACGCGTACGGGTAC +
Preference number: 4 (lower is better)
Translates to: KSTPRAHVHGLRLERWRYCHGDV*GDAYGY
Trigger: GTACCCGTACGCGTCCCCCCAGACGTCGCCATGGCA...GTAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp ATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCTGCCATGGCGACGTCTaGGGGGACGCGTACGGGTAC +
Preference number: 4 (lower is better)
Translates to: ICLFTVSSFRVQMHTRTPCHGDV*GDAYGY
Trigger: GTACCCGTACGCGTCCCCCCAGACGTCGCCATGGCA...GGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTACCGTTGGCGGGAAGGTCGGGGTCCGTGGTCTTaGGAGACACGCAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: AHVHGLRLERWRYRWREGRGPWS*ETRRET
Trigger: AGTCTCCCTGCGTGTCTCCCAAGACCACGGACCCCG...ACCTTCCCGCCAACGGTAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp GTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACCCTCCTCGGGGTCCGTaGTCTTGGGAGACACGCAGG +
Preference number: 4 (lower is better)
Translates to: VVSASLEKAPHALMFTAYPPRGP*SWETRR
Trigger: CCTGCGTGTCTCCCAAGACCACGGACCCCGAGGAGG...GTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp TCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACACCTCCTCGGGGTCCGTaGTCTTGGGAGACACGCAGG +
Preference number: 4 (lower is better)
Translates to: SFPFQGIDGSVSLTGHHTPPRGP*SWETRR
Trigger: CCTGCGTGTCTCCCAAGACCACGGACCCCGAGGAGG...TGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp TTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTCGTGCGGGGACGGCGTaGGCGAGTGGTGGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: FQGIDGSVSLTGHHTVKCRAGTA*ASGGVS
Trigger: ACTCACCCCACCACTCGCCCACGCCGTCCCCGCACG...ACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTACCACGATGGCCGAGCTaGTGTACTGGGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: VIADREALLGEDTSALLLPRWPS*CTGWCC
Trigger: GCAACACCACCCAGTACACCAGCTCGGCCATCGTGG...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GCTGCTTTACGGCGACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCCACGATGGCCGAGCTaGTGTACTGGGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: AALRRRRFCVFRKSTPRAPRWPS*CTGWCC
Trigger: GCAACACCACCCAGTACACCAGCTCGGCCATCGTGG...AGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCGTAAAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp TTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACGGCACCGCCAGGTACTaGTCGCAGAAGCCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: FLSFSGHRWLGLTNGTSHGTARY*SQKPPF
Trigger: GAAGGGCGGCTTCTGCGACCAGTACCTGGCGGTGCC...GTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp CGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTCATACGGGCCTGAGTaGGACGGCAGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: RFCVFRKSTPRAHVHGLRSYGPE*DGSCQS
Trigger: GGACTGGCAGCTGCCGTCCCACTCAGGCCCGTATGA...CCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGTGGCCTCGTGGCTGGTaGTGGACACGGTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PTATVNHSSWLSRVLLELWPRGW*WTRSSL
Trigger: CAGGGAAGACCGTGTCCACCACCAGCCACGAGGCCA...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TACGGCGACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCTGGCCTCGTGGCTGGTaGTGGACACGGTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: YGDVVSASLEKAPHALMFWPRGW*WTRSSL
Trigger: CAGGGAAGACCGTGTCCACCACCAGCCACGAGGCCA...GAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp CGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGGGATGGCCTCGTGGCTaGTGGTGGACACGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RFCVFRKSTPRAHVHGLRGWPRG*WWTRSS
Trigger: GGAAGACCGTGTCCACCACCAGCCACGAGGCCATCC...CCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCGAGAGGATGGCCTCGTaGCTGGTGGTGGACACGGTC +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFERMAS*LVVDTV
Trigger: GACCGTGTCCACCACCAGCCACGAGGCCATCCTCTC...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTAACAGCGTGCGGCCGCTaGGTTGCGGGACGTGAACGC +
Preference number: 4 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLTACGR*VAGRER
Trigger: GCGTTCACGTCCCGCAACCCAGCGGCCGCACGCTGT...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
ENST00000590313.5
CDS-3UTR CCA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGAGCATTCGATGGGGTTaGAGGCCACCTGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWSIRWG*RPPAGT
Trigger: TGTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCT...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGTTCTGTTTTTATAATTaGAACGTTGGCGGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTFCFYN*NVGGKV
Trigger: TACCTTCCCGCCAACGTTCCAATTATAAAAACAGAA...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCACACCGGTCCACAGGTTaGAGCAGGCTCATAATCATC +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGAHRSTG*SRLIII
Trigger: GATGATTATGAGCCTGCTCCAACCTGTGGACCGGTG...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCAGCGGGAGAAAGGTCGTaGAGCTTGGGGCTCACGCCA +
Preference number: 4 (lower is better)
Translates to: TAPGFLGSSSNCVRRENAAGERS*SLGLTP
Trigger: TGGCGTGAGCCCCAAGCTCCACGACCTTTCTCCCGC...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGGACAGTGGCCCGGGCTaGCAACGCCCTTGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GMAFRLFLSVSETQETRLDSGPG*QRPWCR
Trigger: CCTACACCAAGGGCGTTGCCAGCCCGGGCCACTGTC...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GCTGAACTGAGTGCTCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGCTCCAGGTGACACAGTaGTCTCCCTTCCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: AELSAPMWQLGVGARAGELQVTQ*SPFLPA
Trigger: AGCAGGGAGGAAGGGAGACCACTGTGTCACCTGGAG...CTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGAGCACTCAGTTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
CDS-3UTR CCA 90 bp CTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGGGTCAAACTGCGTGTaGGCCGTTCCCATGAAAGGC +
Preference number: 4 (lower is better)
Translates to: LEPQTQVPKRMPVIADREGSNCV*AVPMKG
Trigger: GCCTTTCATGGGAACGGCCCACACGCAGTTTGACCC...TTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTGGGTCAAACTGCGTGTaGGCCGTTCCCATGAAAGGC +
Preference number: 4 (lower is better)
Translates to: GALSPSATFCSVTSQPEPGSNCV*AVPMKG
Trigger: GCCTTTCATGGGAACGGCCCACACGCAGTTTGACCC...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGGATGCCCTGATGGTCTaGTTAAATAAGGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLDALMV*LNKALP
Trigger: TGGAAGTGCCTTATTTAACCAGACCATCAGGGCATC...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTCAATCACAGCTCCTaGCTTTCTAGGGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSVNHSS*LSRVLL
Trigger: GAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGAC...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGTCGAAGTCGAACTCCTaGTCCTCCAGCCCCGTCATG +
Preference number: 4 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWSKSNS*SSSPVM
Trigger: CATGACGGGGCTGGAGGACCAGGAGTTCGACTTCGA...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318065.9
ENST00000329101.8
ENST00000545796.5
CDS-3UTR CCA 90 bp ACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGTCGAAGTCGAACTCCTaGTCCTCCAGCCCCGTCATG +
Preference number: 4 (lower is better)
Translates to: TFCSVTSQPEPPPAGAIQSKSNS*SSSPVM
Trigger: CATGACGGGGCTGGAGGACCAGGAGTTCGACTTCGA...CTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318065.9
ENST00000329101.8
ENST00000545796.5
CDS-3UTR CCA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGGCGCCCTCGTCGCGCTaGTTAAACTCGAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWAPSSR*LNSKRN
Trigger: GTTCCTCTTCGAGTTTAACCAGCGCGACGAGGGCGC...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318065.9
ENST00000329101.8
ENST00000545796.5
CDS-3UTR CCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGGAGGAGAGGGGCTGCTaGGGCAGAGCGAGTGTTCGA +
Preference number: 4 (lower is better)
Translates to: PTATVNHSSWLSRVLLELEERGC*GRASVR
Trigger: TCGAACACTCGCTCTGCCCCAGCAGCCCCTCTCCTC...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTCATCCAGGTACAACTaGTCCAACTCTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SNCVWAVPMKGPCTVGLPSSRYN*SNSSGS
Trigger: AGAGCCTGAAGAGTTGGACCAGTTGTACCTGGATGA...CGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
3UTR CAA 72 bp GCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATaGAACCCCAGGGGTGCCAGAAGGGCTGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: ALMVWLNKALPV*NPRGARRAGRG
Trigger: CCCACGCCCAGCCCTTCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCGCGGCAGGGCGGGGCTaGCGTTGGAGGATGCATAGC +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGAAGRG*RWRMHS
Trigger: GCTATGCATCCTCCAACGTCAGCCCCGCCCTGCCGC...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGCCCGGTGTGGAGGTCTaGAGGTTGTGGCACGGGGCC +
Preference number: 4 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRPGVEV*RLWHGA
Trigger: GGCCCCGTGCCACAACCTTCAGACCTCCACACCGGG...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCGATCCGCCGGCGGGATaGTGCCCGGTGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGDPPAG*CPVWRS
Trigger: AGACCTCCACACCGGGCATCATCCCGCCGGCGGATC...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCTGGTCTTGCGGGACTTaGCAGGGACGCCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFWSCGT*QGRHLP
Trigger: TGGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCA...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp GCTGAACTGAGTGCTCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGAGAAGCCGCCCTTCCTaGTGTGCTGGAAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: AELSAPMWQLGVGARAGERSRPS*CAGKRS
Trigger: ACTCCTCTTTCCAGCACATCAGGAAGGGCGGCTTCT...CTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGAGCACTCAGTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253506.9
ENST00000318065.9
CDS-3UTR TCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTCCGCCGTCCCAATaGAAAGCTGCAGCATCAGCG +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFRPPSQ*KAAASA
Trigger: CGCTGATGCTGCAGCTTTTCATTGGGACGGCGGACG...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTACTGGGTTGCGGGACGTaGACGCGGAACACCAGCCGT +
Preference number: 4 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLLGCGT*TRNTSR
Trigger: ACGGCTGGTGTTCCGCGTTCACGTCCCGCAACCCAG...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
ENST00000590313.5
CDS-3UTR TCA 90 bp ATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAACACGCCTGGGTTGCGGGACGTaGACGCGGAACACCAGCCGT +
Preference number: 4 (lower is better)
Translates to: IDGSVSLTGHHTVKCATRLGCGT*TRNTSR
Trigger: ACGGCTGGTGTTCCGCGTTCACGTCCCGCAACCCAG...GCGTGTTGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCACTTTCTCCACGAAAATaGCCTTGGAGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGALSPRK*PWSPAG
Trigger: TCCTGCAGGACTCCAAGGTCATTTTCGTGGAGAAAG...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGGGGCTGGTTATCCTCTaGTTCCGAAATGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWGLVIL*FRNGGI
Trigger: GATCCCGCCATTTCGGAATCAGAGGATAACCAGCCC...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTGCAGACGTAGAAACTaGCGTGAACGGGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: GSPFSISDVLFSDFTAGACRRRN*RERGWL
Trigger: TAACCAGCCCCGTTCACGTCAGTTTCTACGTCTGCA...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCATACCCCTGCTGAACTaGGTGCTCCAATGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPIPLLN*VLQCGN
Trigger: GTTGCCACATTGGAGCACTCAGTTCAGCAGGGGTAT...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCATACCCCTGCTGAACTaGGTGCTCCAATGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: GSPFSISDVLFSDFTAGAIPLLN*VLQCGN
Trigger: GTTGCCACATTGGAGCACTCAGTTCAGCAGGGGTAT...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATAAAGTCTTTGTCTGCTaGAGTCAGCATACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHKVFVC*SQHTPA
Trigger: AGCAGGGGTATGCTGACTTCAGCAGACAAAGACTTT...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAAAAGTCTTTGTCTGCTaGAGTCAGCATACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKKVFVC*SQHTPA
Trigger: AGCAGGGGTATGCTGACTTCAGCAGACAAAGACTTT...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTTCCCTTCTGTTGTCATaGGATGACTTCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSSLLLS*DDFSSR
Trigger: CCTGGAGGAGAAGTCATCTCATGACAACAGAAGGGA...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGCGAGCATGCGACTATaGACAAGCCTACGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSASMRL*TSLRFQ
Trigger: TTGAAACCGTAGGCTTGTTCATAGTCGCATGCTCGC...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCGATGCCGGTTATTGCTaGCAGGGAAGCCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFDAGYC*QGSPPG
Trigger: CCCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATC...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAGCCCGGTGGTAAGGCTTCTGTaGAACAATCATCTTATAACT +
Preference number: 4 (lower is better)
Translates to: VGRSHERPLHGGSPVLSPVVRLL*NNHLIT
Trigger: AGTTATAAGATGATTGTTTCACAGAAGCCTTACCAC...CGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTACGTTTCCTTTTCAATaGCAGTCCCCTGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGTFPFQ*QSPEKG
Trigger: GCCTTTCTCAGGGGACTGTCATTGAAAAGGAAACGT...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGTGTACTTCCTCTTGTTaGAAGGGGACGCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLCTSSC*KGTRVW
Trigger: CCAGACCCGCGTCCCCTTGCAACAAGAGGAAGTACA...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCGCCACTGAGGGCGGCTaGTCCAGGGTGGTCTTGCGG +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGATEGG*SRVVLR
Trigger: CCGCAAGACCACCCTGGAGCAGCCGCCCTCAGTGGC...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCGAGTGGGACGGCAGCTaGCAGTCCAGGGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTEWDGS*QSRAGR
Trigger: CCTGCCCGCCCTGGACTGGCAGCTGCCGTCCCACTC...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp ACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGTGGTGGGACTTGGGCTaGACCTCAATCCGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: TFCSVTSQPEPPPAGAIQWWDLG*TSIRSS
Trigger: TGAGCTTCGGATTGAGGTGCAGCCCAAGTCCCACCA...CTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCCCTGCAGGGACAGCGTaGGGCCGCTGGGTTGCGGGA +
Preference number: 4 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTPAGTA*GRWVAG
Trigger: TCCCGCAACCCAGCGGCCGCACGCTGTCCCTGCAGG...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AAAGATGGCGTTACCGTTGGCGGGAAGGTAGGTGAAACGCTGGTACTGGCTTCGCCGGATAGCTGTCCGTaGTCTGCTTCTCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: KDGVTVGGKVGETLVLASPDSCP*SASPPE
Trigger: CTCTGGTGGAGAAGCAGAGCACGGACAGCTATCCGG...CGAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCAACGGTAACGCCATCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR GCA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCATGACCTTGGAGTCCTaGAGGAAGTTGTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: GSPFSISDVLFSDFTAGAMTLES*RKLWPD
Trigger: GTCTGGCCACAACTTCCTGCAGGACTCCAAGGTCAT...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCGGACTACCGTCCTCATaGACCTCTGGCAGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFGLPSS*TSGSSR
Trigger: ACGGCTGCTGCCAGAGGTGCATGAGGACGGTAGTCC...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CTGGAGAAGTGTCTCGGGGACGTCCGCCCAGCACAAAGCTCATTCACCATCCTTTGCAACACGCCACGCTaGTTTACGGCGACGTCGTTT +
Preference number: 4 (lower is better)
Translates to: LEKCLGDVRPAQSSFTILCNTPR*FTATSF
Trigger: AAACGACGTCGCCGTAAAGCAGCGTGGCGTGTTGCA...AAGGATGGTGAATGAGCTTTGTGCTGGGCGGACGTCCCCGAGACACTTCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp GACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTAAGGGACTGGAAAGCTaGTGCTTGGCATCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: DVVSASLEKAPHALMFTAKGLES*CLASAR
Trigger: CCGCGCGGATGCCAAGCACCAGCTTTCCAGTCCCTT...AGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTAACTGGTTATTGTTGTaGTACAGGCCCAAGCACGAG +
Preference number: 4 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVNWLLL*YRPKHE
Trigger: CTCGTGCTTGGGCCTGTACCACAACAATAACCAGTT...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp AAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTAGACTCAGCGTGGCCGTaGAGGGGGACCGTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: KKHPTRSCSRLTVRKMALDSAWP*RGTVWS
Trigger: GCTCCAAACGGTCCCCCTCCACGGCCACGCTGAGTC...TAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp TTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTGACTCAGCGTGGCCGTaGAGGGGGACCGTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: FPFQGIDGSVSLTGHHTVDSAWP*RGTVWS
Trigger: GCTCCAAACGGTCCCCCTCCACGGCCACGCTGAGTC...AACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp AAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTATGTAGGCCTCCAGGCTaGGCAGACTCAGCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: KKHPTRSCSRLTVRKMALCRPPG*ADSAWP
Trigger: CGGCCACGCTGAGTCTGCCCAGCCTGGAGGCCTACA...TAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp GATGGCGTTACCGTTGGCGGGAAGGTAGGTGAAACGCTGGTACTGGCTTCGCTTACGGGTACGAGTAGTTaGACTCGTAGGAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: DGVTVGGKVGETLVLASLTGTSS*TRRRRP
Trigger: AGGCCTCCTCCTACGAGTCCAACTACTCGTACCCGT...AAGCGAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCAACGGTAACGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp TCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACACGGGGTCCGTGGTCTTaGGAGACACGCAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: SFPFQGIDGSVSLTGHHTRGPWS*ETRRET
Trigger: AGTCTCCCTGCGTGTCTCCCAAGACCACGGACCCCG...TGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTACCTCCTCGGGGTCCGTaGTCTTGGGAGACACGCAGG +
Preference number: 4 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLPPRGP*SWETRR
Trigger: CCTGCGTGTCTCCCAAGACCACGGACCCCGAGGAGG...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253506.9
ENST00000318065.9
CDS-3UTR CCA 90 bp TTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCTCAGTTTTTCCTCCTCGGGGTCCGTaGTCTTGGGAGACACGCAGG +
Preference number: 4 (lower is better)
Translates to: FTVSSFRVQMHTRTPSVFPPRGP*SWETRR
Trigger: CCTGCGTGTCTCCCAAGACCACGGACCCCGAGGAGG...AAAAACTGAGGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTGCCGAGCTGGTGTACTaGGTGGTGTTGCCCAACCAC +
Preference number: 4 (lower is better)
Translates to: DVVSASLEKAPHALMFTAAELVY*VVLPNH
Trigger: GTGGTTGGGCAACACCACCCAGTACACCAGCTCGGC...AGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATTCATACGGGCCTGAGTaGGACGGCAGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: DREALLGEDTSALLLFIHSYGPE*DGSCQS
Trigger: GGACTGGCAGCTGCCGTCCCACTCAGGCCCGTATGA...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACTCATACGGGCCTGAGTaGGACGGCAGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: FLSFSGHRWLGLTNGTSHSYGPE*DGSCQS
Trigger: GGACTGGCAGCTGCCGTCCCACTCAGGCCCGTATGA...GTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp TGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAACATGCAGCTGCACGATaGGGTGTCCTCCGGCCGACG +
Preference number: 4 (lower is better)
Translates to: CVFRKSTPRAHVHGLRLEHAAAR*GVLRPT
Trigger: CGTCGGCCGGAGGACACCCCATCGTGCAGCTGCATG...TTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp TTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCTCAGTTTTTCATGCAGCTGCACGATaGGGTGTCCTCCGGCCGACG +
Preference number: 4 (lower is better)
Translates to: FTVSSFRVQMHTRTPSVFHAAAR*GVLRPT
Trigger: CGTCGGCCGGAGGACACCCCATCGTGCAGCTGCATG...AAAAACTGAGGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGGCCTCGTGGCTGGTaGTGGACACGGTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: GMAFRLFLSVSETQETRLWPRGW*WTRSSL
Trigger: CAGGGAAGACCGTGTCCACCACCAGCCACGAGGCCA...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGGGATGGCCTCGTGGCTaGTGGTGGACACGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GMAFRLFLSVSETQETRLGWPRG*WWTRSS
Trigger: GGAAGACCGTGTCCACCACCAGCCACGAGGCCATCC...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACGGATGGCCTCGTGGCTaGTGGTGGACACGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: FLSFSGHRWLGLTNGTSHGWPRG*WWTRSS
Trigger: GGAAGACCGTGTCCACCACCAGCCACGAGGCCATCC...GTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp CCCTTTTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATGAGAGGATGGCCTCGTaGCTGGTGGTGGACACGGTC +
Preference number: 4 (lower is better)
Translates to: PFSFPFQGIDGSVSLTGHERMAS*LVVDTV
Trigger: GACCGTGTCCACCACCAGCCACGAGGCCATCCTCTC...ATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp TACAACTGGTCCAACTCTTCAGGCTCTCGCTTGACCGTTACAGGAATAGGGGCCTGGTGTTGGAGAGGATaGCCTCGTGGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: YNWSNSSGSRLTVTGIGAWCWRG*PRGWWW
Trigger: CCACCACCAGCCACGAGGCCATCCTCTCCAACACCA...GGCCCCTATTCCTGTAACGGTCAAGCGAGAGCCTGAAGAGTTGGACCAGTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp ACCAGAGAATTCGGCTTGCACAGGTCCCGGTCAGTTTTCGCTTCCATCTCCCAGAGCATTCGATGGGGTTaGAGGCCACCTGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: TREFGLHRSRSVFASISQSIRWG*RPPAGT
Trigger: TGTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCT...CTGGGAGATGGAAGCGAAAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAGACATGGTGGCCATCTaGGGCTTTCTCCACGAAAAT +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGADMVAI*GFLHEN
Trigger: ATTTTCGTGGAGAAAGCCCCAGATGGCCACCATGTC...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTCCTCTGATTCCGAAATaGCGGGATCTCAACCACCAG +
Preference number: 4 (lower is better)
Translates to: TVQAVPSAGALSPSATFCPLIPK*RDLNHQ
Trigger: CTGGTGGTTGAGATCCCGCCATTTCGGAATCAGAGG...ACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CCAGCCTGGATGCCCGTGGTCCCAGGAGATGAAGTTACCCCTGGAGAAGTGTCTCCTCTGATTCCGAAATaGCGGGATCTCAACCACCAG +
Preference number: 4 (lower is better)
Translates to: PAWMPVVPGDEVTPGEVSPLIPK*RDLNHQ
Trigger: CTGGTGGTTGAGATCCCGCCATTTCGGAATCAGAGG...AGACACTTCTCCAGGGGTAACTTCATCTCCTGGGACCACGGGCATCCAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp GGTCACCCAGGGACTATGGTGCTACGTCCAGGAGAGAAGAGACGACGGAGGCAAGTGAAACGCTGGTACTaGCTTCGCTTTCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: GHPGTMVLRPGEKRRRRQVKRWY*LRFLFP
Trigger: CGGGAAGAGAAAGCGAAGCCAGTACCAGCGTTTCAC...TTGCCTCCGTCGTCTCTTCTCTCCTGGACGTAGCACCATAGTCCCTGGGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTAGAGGACTTAACCCCTaGCTCACCGGTCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: GALSPSATFCSVTSQPEPRGLNP*LTGPQV
Trigger: AACCTGTGGACCGGTGAGCCAGGGGTTAAGTCCTCT...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGTTAATGTTCAGCTCCTaGCATTCAGTCAGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: QETRLCRSARYRPFLLRELMFSS*HSVSWR
Trigger: CCTCCAACTGACTGAATGCCAGGAGCTGAACATTAA...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCGATGCCCTGATGGTCTaGTTAAATAAGGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: RLCRSARYRPFLLREPFLDALMV*LNKALP
Trigger: TGGAAGTGCCTTATTTAACCAGACCATCAGGGCATC...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGAGCAAGAGCAGCGACTaGAGCCCCAGACGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PTATVNHSSWLSRVLLELSKSSD*SPRRRF
Trigger: GAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTTGCT...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTTGCAGACCGACGGGATaGCCTTCAGGTTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSCRPTG*PSGCFF
Trigger: AAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCA...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AAAGCTGCAGCATCAGCGGCTCATTCTCCAAGTAGCCATGCAGCTGCACGATGGTCGAAGTCGAACTCCTaGTCCTCCAGCCCCGTCATG +
Preference number: 4 (lower is better)
Translates to: KAAASAAHSPSSHAAARWSKSNS*SSSPVM
Trigger: CATGACGGGGCTGGAGGACCAGGAGTTCGACTTCGA...CCATCGTGCAGCTGCATGGCTACTTGGAGAATGAGCCGCTGATGCTGCAGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp ACCACCAGAGAATTCGGCTTGCACAGGTCCCGGTCAGTTTTCGCTTCCATCTCCGCGCCCTCGTCGCGCTaGTTAAACTCGAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: TTREFGLHRSRSVFASISAPSSR*LNSKRN
Trigger: GTTCCTCTTCGAGTTTAACCAGCGCGACGAGGGCGC...GGAGATGGAAGCGAAAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp GCAGGAGTGTACGTGACAGCCCAGGAAACGTTCCAAATGTTGGAGACTCATACTAGGCAGGTCGGCTCTTaGGTGGCAGGCGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: AGVYVTAQETFQMLETHTRQVGS*VAGGSG
Trigger: TCCACTCCCGCCTGCCACCCAAGAGCCGACCTGCCT...AGTATGAGTCTCCAACATTTGGAACGTTTCCTGGGCTGTCACGTACACTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGCTCTGGCAGCAGCCGTaGCCCGGCAGTCGGAGACTC +
Preference number: 4 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRLWQQP*PGSRRL
Trigger: GAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAG...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTTCATCCAGGTACAACTaGTCCAACTCTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVSSRYN*SNSSGS
Trigger: AGAGCCTGAAGAGTTGGACCAGTTGTACCTGGATGA...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAGTGTTCTTCCTCCGCTaGCTTCATGGTGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: CVFRKSTPRAHVHGLRLEVFFLR*LHGAAG
Trigger: GCCGGCGGCACCATGAAGTCAGCGGAGGAAGAACAC...TTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAAGCCAGCTCTCCTCAGTaGCGCTGGCGCGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GALIPKARVQVNRVSMNKASSPQ*RWRGAR
Trigger: CCTCGCCCCGCGCCAGCGTCACTGAGGAGAGCTGGC...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp GCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCGGTGGTCAGCGCGTTaGTGGCGGCCACGATGGCCG +
Preference number: 4 (lower is better)
Translates to: ACKIAIPICLFTVSSFRVRWSAR*WRPRWP
Trigger: CGGCCATCGTGGCCGCCATCAACGCGCTGACCACCG...CACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp ATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCTGGTCTTGCGGGACTTaGCAGGGACGCCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: ICLFTVSSFRVQMHTRTPWSCGT*QGRHLP
Trigger: TGGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCA...GGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTAGAAGCCGCCCTTCCTaGTGTGCTGGAAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIRSRPS*CAGKRS
Trigger: ACTCCTCTTTCCAGCACATCAGGAAGGGCGGCTTCT...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp GCTGCTTTACGGCGACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTAGAAGCCGCCCTTCCTaGTGTGCTGGAAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: AALRRRRFCVFRKSTPRARSRPS*CAGKRS
Trigger: ACTCCTCTTTCCAGCACATCAGGAAGGGCGGCTTCT...AGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCGTAAAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp TGGTTATCCTCTGATTCCGAAATGGCGGGATCTCAACCACCAGAGAATTCGGCTAAGCTCATACGGGCCTaGGTGGGACGGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: WLSSDSEMAGSQPPENSAKLIRA*VGRQLP
Trigger: TGGCAGCTGCCGTCCCACTCAGGCCCGTATGAGCTT...AGCCGAATTCTCTGGTGGTTGAGATCCCGCCATTTCGGAATCAGAGGATAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR TCA 90 bp ATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAACACGCAAGCTCATACGGGCCTaGGTGGGACGGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: IDGSVSLTGHHTVKCATRKLIRA*VGRQLP
Trigger: TGGCAGCTGCCGTCCCACTCAGGCCCGTATGAGCTT...GCGTGTTGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGCGTCCGCCGTCCCAATaGAAAGCTGCAGCATCAGCG +
Preference number: 4 (lower is better)
Translates to: GMAFRLFLSVSETQETRLRPPSQ*KAAASA
Trigger: CGCTGATGCTGCAGCTTTTCATTGGGACGGCGGACG...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCCTTTCTCCACGAAAATaGCCTTGGAGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPLSPRK*PWSPAG
Trigger: TCCTGCAGGACTCCAAGGTCATTTTCGTGGAGAAAG...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACGGGCTGGTTATCCTCTaGTTCCGAAATGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: FLSVSETQETRLCRSARYGLVIL*FRNGGI
Trigger: GATCCCGCCATTTCGGAATCAGAGGATAACCAGCCC...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AAAGCTGCAGCATCAGCGGCTCATTCTCCAAGTAGCCATGCAGCTGCACGATGGGGGCTGGTTATCCTCTaGTTCCGAAATGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: KAAASAAHSPSSHAAARWGLVIL*FRNGGI
Trigger: GATCCCGCCATTTCGGAATCAGAGGATAACCAGCCC...CCATCGTGCAGCTGCATGGCTACTTGGAGAATGAGCCGCTGATGCTGCAGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR TCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCTGGCGGGAAGGTAGGTaGAACGCTGGTACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFWREGR*NAGTGF
Trigger: GAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCA...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR TCA 90 bp TACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACATGGCGGGAAGGTAGGTaGAACGCTGGTACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: YVQTDGMAFRLFLSVSETWREGR*NAGTGF
Trigger: GAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCA...TGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAAAAGTCTTTGTCTGCTaGAGTCAGCATACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGAKVFVC*SQHTPA
Trigger: AGCAGGGGTATGCTGACTTCAGCAGACAAAGACTTT...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGGAGTGGTACCAGGTGTaGGTTCAGTTTATTTATTCA +
Preference number: 4 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLEEWYQV*VQFIYS
Trigger: TGAATAAATAAACTGAACTCACACCTGGTACCACTC...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGGTAAAACCTCACAATaGAATGTGTTTGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDGKTSQ*NVFAVS
Trigger: AGAAACTGCAAACACATTTCATTGTGAGGTTTTACC...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACTGTCCAGTAACCTATTaGTGTGCTATTCAAGTTACT +
Preference number: 4 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDCPVTY*CAIQVT
Trigger: AGTAACTTGAATAGCACATCAATAGGTTACTGGACA...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCCTCCTCGAACTGCGTaGGACGAGAAAATGCACGGC +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFPPRTA*DEKMHG
Trigger: GCCGTGCATTTTCTCGTCTCACGCAGTTCGAGGAGG...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGTGGTAAGGCTTCTGTaGAACAATCATCTTATAACT +
Preference number: 4 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDVVRLL*NNHLIT
Trigger: AGTTATAAGATGATTGTTTCACAGAAGCCTTACCAC...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCACGACGTTCTGTTCAGTaGCTTCACAGCCGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: TAPGFLGSSSNCVRRENARRSVQ*LHSRSL
Trigger: GAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCG...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAATCAATGACAGTCCCCTaGGAAAGGCTGCACGTGACT +
Preference number: 4 (lower is better)
Translates to: LEPQTQVPKRMPVIADRESMTVP*ERLHVT
Trigger: AGTCACGTGCAGCCTTTCTCAGGGGACTGTCATTGA...TTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGTCAATGACAGTCCCCTaGGAAAGGCTGCACGTGACT +
Preference number: 4 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWSMTVP*ERLHVT
Trigger: AGTCACGTGCAGCCTTTCTCAGGGGACTGTCATTGA...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAACGTTTCCTTTTCAATaGCAGTCCCCTGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGATFPFQ*QSPEKG
Trigger: GCCTTTCTCAGGGGACTGTCATTGAAAAGGAAACGT...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGAACTACAAAGACAGCTaGCACAGACATCAAACGTTT +
Preference number: 4 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLNYKDS*HRHQTF
Trigger: AAACGTTTGATGTCTGTGTCAGCTGTCTTTGTAGTT...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTGAACCTGGCCTGCGTTaGGCCATGCTGGAGCAGATG +
Preference number: 4 (lower is better)
Translates to: LSFSGHRWLGLTNGTSHSEPGLR*AMLEQM
Trigger: CATCTGCTCCAGCATGGCTCAACGCAGGCCAGGTTC...ACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp TTATACATTCGCAAGAAGCAAAATAACCGTGACTATCTGAGTATGCAACCCCCGCGCGGCCCTAGGACCTaGGCGGTGGCTCCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LYIRKKQNNRDYLSMQPPRGPRT*AVAPSP
Trigger: AGGGCTCGGAGCCACCGCGCAGGTCCTAGGGCCGCG...CGGGGGTTGCATACTCAGATAGTCACGGTTATTTTGCTTCTTGCGAATGTATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp TTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTCCCACCGTCCAAAGCTaGTCCGTACCCCGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: FQGIDGSVSLTGHHTVKCPTVQS*SVPRGV
Trigger: CACCCCTCGGGGTACGGAGCAGCTTTGGACGGTGGG...ACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACACGAGGTTATCTCGATaGGAGGACTCTCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FLSVSETQETRLCRSARYTRLSR*EDSPGQ
Trigger: CTGCCCTGGAGAGTCCTCGCATCGAGATAACCTCGT...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGTCCGGGAGGACAGGCTaGTGGCCGGGCTCAGGCACG +
Preference number: 4 (lower is better)
Translates to: EPIFAHINVQLLAFSQLESGRTG*WPGSGT
Trigger: CGTGCCTGAGCCCGGCCAGCAGCCTGTCCTCCCGGA...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGGACACGCAGGGAGACTaGCATGGCGACGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRDTQGD*HGDVWG
Trigger: CCCCCAGACGTCGCCATGGCAGTCTCCCTGCGTGTC...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp TTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGACACGCAGGGAGACTaGCATGGCGACGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: FQGIDGSVSLTGHHTVKCDTQGD*HGDVWG
Trigger: CCCCCAGACGTCGCCATGGCAGTCTCCCTGCGTGTC...ACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACTGTACTTCCTCTTGTTaGAAGGGGACGCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FLSVSETQETRLCRSARYCTSSC*KGTRVW
Trigger: CCAGACCCGCGTCCCCTTGCAACAAGAGGAAGTACA...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp AAAGATGGCGTTACCGTTGGCGGGAAGGTAGGTGAAACGCTGGTACTGGCTTCGTGTACTTCCTCTTGTTaGAAGGGGACGCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KDGVTVGGKVGETLVLASCTSSC*KGTRVW
Trigger: CCAGACCCGCGTCCCCTTGCAACAAGAGGAAGTACA...CGAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCAACGGTAACGCCATCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR GCA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCGCCACTGAGGGCGGCTaGTCCAGGGTGGTCTTGCGG +
Preference number: 4 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTATEGG*SRVVLR
Trigger: CCGCAAGACCACCCTGGAGCAGCCGCCCTCAGTGGC...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp GCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGGAGTGGGACGGCAGCTaGCAGTCCAGGGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ACKIAIPICLFTVSSFRVEWDGS*QSRAGR
Trigger: CCTGCCCGCCCTGGACTGGCAGCTGCCGTCCCACTC...CACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACTGGTGGGACTTGGGCTaGACCTCAATCCGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: FLSVSETQETRLCRSARYWWDLG*TSIRSS
Trigger: TGAGCTTCGGATTGAGGTGCAGCCCAAGTCCCACCA...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGATGACCTTGGAGTCCTaGAGGAAGTTGTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLMTLES*RKLWPD
Trigger: GTCTGGCCACAACTTCCTGCAGGACTCCAAGGTCAT...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp ACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGCCAGAGAATTCGGCTTaGACAGGTCCCGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: TFCSVTSQPEPPPAGAIQPENSA*TGPGQF
Trigger: AAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGG...CTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAGCCCGAGTAACCTATTGATGTaGTATTCAAGTTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: VGRSHERPLHGGSPVLSPSNLLM*YSSYLC
Trigger: GCACAAGTAACTTGAATAGCACATCAATAGGTTACT...CGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCAGATATGTACACACATaGAAATGCAGGCTATCCTGT +
Preference number: 4 (lower is better)
Translates to: RDAIVPERTVQAVPSAGARYVHT*KCRLSC
Trigger: ACAGGATAGCCTGCATTTGCATGTGTGTACATATCT...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCTCCTACAGTGCCGGGTaGAGGGTACCCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGSYSAG*RVPSRR
Trigger: CCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGA...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTATACATTCGCAAGAAGCAAAATAACCGTGACTATCTGAGTATGCAACCCCCGCTAGGACCTGCGCGGTaGCTCCGAGCCCTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: LYIRKKQNNRDYLSMQPPLGPAR*LRALPA
Trigger: CGCGGGCAGGGCTCGGAGCCACCGCGCAGGTCCTAG...CGGGGGTTGCATACTCAGATAGTCACGGTTATTTTGCTTCTTGCGAATGTATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp ATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAACACGCCGGGGTCCGTGGTCTTaGGAGACACGCAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: IDGSVSLTGHHTVKCATRRGPWS*ETRRET
Trigger: AGTCTCCCTGCGTGTCTCCCAAGACCACGGACCCCG...GCGTGTTGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTAAGCTGGTGTACTGGGTaGTGTTGCCCAACCACGAGT +
Preference number: 4 (lower is better)
Translates to: VIADREALLGEDTSALLLSWCTG*CCPTTS
Trigger: ACTCGTGGTTGGGCAACACCACCCAGTACACCAGCT...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp CCCTTTTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCCACGATGGCCGAGCTaGTGTACTGGGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: PFSFPFQGIDGSVSLTGHPRWPS*CTGWCC
Trigger: GCAACACCACCCAGTACACCAGCTCGGCCATCGTGG...ATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp ATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCCCACGATGGCCGAGCTaGTGTACTGGGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: ICLFTVSSFRVQMHTRTPPRWPS*CTGWCC
Trigger: GCAACACCACCCAGTACACCAGCTCGGCCATCGTGG...GGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAAT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTATGGCCTCGTGGCTGGTaGTGGACACGGTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLWPRGW*WTRSSL
Trigger: CAGGGAAGACCGTGTCCACCACCAGCCACGAGGCCA...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
ENST00000590313.5
CDS-3UTR CCA 90 bp TGGTTATCCTCTGATTCCGAAATGGCGGGATCTCAACCACCAGAGAATTCGGCTTGGCCTCGTGGCTGGTaGTGGACACGGTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: WLSSDSEMAGSQPPENSAWPRGW*WTRSSL
Trigger: CAGGGAAGACCGTGTCCACCACCAGCCACGAGGCCA...AGCCGAATTCTCTGGTGGTTGAGATCCCGCCATTTCGGAATCAGAGGATAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp ATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAACACGCTGGCCTCGTGGCTGGTaGTGGACACGGTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: IDGSVSLTGHHTVKCATRWPRGW*WTRSSL
Trigger: CAGGGAAGACCGTGTCCACCACCAGCCACGAGGCCA...GCGTGTTGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp AAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTACTGGTGTTGGAGAGGATaGCCTCGTGGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KSTPRAHVHGLRLERWRYWCWRG*PRGWWW
Trigger: CCACCACCAGCCACGAGGCCATCCTCTCCAACACCA...GTAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp TACGGCGACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCCCAGGACTTTGGTGTTaGAGAGGATGGCCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: YGDVVSASLEKAPHALMFPGLWC*RGWPRG
Trigger: GCCACGAGGCCATCCTCTCCAACACCAAAGTCCTGG...GAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp ACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTCGTTTCTGCGTCCCAGGACTTTGGTGTTaGAGAGGATGGCCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: TVKCATRHAALRRRRFCVPGLWC*RGWPRG
Trigger: GCCACGAGGCCATCCTCTCCAACACCAAAGTCCTGG...GACGCAGAAACGACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGGGATCTCCAGGACTTTaGTGTTGGAGAGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWGSPGL*CWRGWP
Trigger: AGGCCATCCTCTCCAACACCAAAGTCCTGGAGATCC...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTGCTGGGAGCATTCGATaGGGTTGGAGGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: LSFSGHRWLGLTNGTSHSAGSIR*GWRPPA
Trigger: TGCAGGTGGCCTCCAACCCCATCGAATGCTCCCAGC...ACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGCCTCTGATTCCGAAATaGCGGGATCTCAACCACCAG +
Preference number: 4 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWPLIPK*RDLNHQ
Trigger: CTGGTGGTTGAGATCCCGCCATTTCGGAATCAGAGG...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCGTGAAACGCTGGTACTaGCTTCGCTTTCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFVKRWY*LRFLFP
Trigger: CGGGAAGAGAAAGCGAAGCCAGTACCAGCGTTTCAC...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GCTGAACTGAGTGCTCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTGAAACGCTGGTACTaGCTTCGCTTTCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: AELSAPMWQLGVGARAGEVKRWY*LRFLFP
Trigger: CGGGAAGAGAAAGCGAAGCCAGTACCAGCGTTTCAC...CTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGAGCACTCAGTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
ENST00000590313.5
CDS-3UTR CCA 90 bp TCCTCATGCACCTCTGGCAGCAGCCGTGGCCCGGCAGTCGGAGACTCGTCCCTGTTCTGTTTTTATAATTaGAACGTTGGCGGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: SSCTSGSSRGPAVGDSSLFCFYN*NVGGKV
Trigger: TACCTTCCCGCCAACGTTCCAATTATAAAAACAGAA...CAGGGACGAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTAGAGGACTTAACCCCTaGCTCACCGGTCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIRGLNP*LTGPQV
Trigger: AACCTGTGGACCGGTGAGCCAGGGGTTAAGTCCTCT...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GCAGGAGTGTACGTGACAGCCCAGGAAACGTTCCAAATGTTGGAGACTCATACTGCGGGAGAAAGGTCGTaGAGCTTGGGGCTCACGCCA +
Preference number: 4 (lower is better)
Translates to: AGVYVTAQETFQMLETHTAGERS*SLGLTP
Trigger: TGGCGTGAGCCCCAAGCTCCACGACCTTTCTCCCGC...AGTATGAGTCTCCAACATTTGGAACGTTTCCTGGGCTGTCACGTACACTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGGGGTGCGTGGCCACTaGCCTGGGCACGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: EPIFAHINVQLLAFSQLEGVRGH*PGHVLD
Trigger: GTCCAGGACGTGCCCAGGCCAGTGGCCACGCACCCC...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp CTCGTGCTGGAGAGGTCATTTCGTATTATTTCATTTACGTCATCCAGGTACAACGCGAGCCGGGGTGCGTaGCCACTGGCCTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: LVLERSFRIISFTSSRYNASRGA*PLAWAR
Trigger: ACGTGCCCAGGCCAGTGGCCACGCACCCCGGCTCGC...GTTGTACCTGGATGACGTAAATGAAATAATACGAAATGACCTCTCCAGCACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTAGTGGGTGCTCGTGCTaGAGAGGTCATTTCGTATTA +
Preference number: 4 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSSGCSC*RGHFVL
Trigger: TAATACGAAATGACCTCTCCAGCACGAGCACCCACT...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGCTGAGTGCTCCAATGTaGCAACTAGGAGTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: TFCSVTSQPEPPPAGAIQLSAPM*QLGVGA
Trigger: AGCACCCACTCCTAGTTGCCACATTGGAGCACTCAG...CTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCTGCTTTCCTTCTTGTTaGAGAGCCAATCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: SNCVRRENARPSEAAMDACFPSC*RANLCT
Trigger: TGTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCA...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCTCCAGGTGACACAGTaGTCTCCCTTCCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PTATVNHSSWLSRVLLELLQVTQ*SPFLPA
Trigger: AGCAGGGAGGAAGGGAGACCACTGTGTCACCTGGAG...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGATGCCCTGATGGTCTaGTTAAATAAGGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKDALMV*LNKALP
Trigger: TGGAAGTGCCTTATTTAACCAGACCATCAGGGCATC...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGTCAATCACAGCTCCTaGCTTTCTAGGGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LEPQTQVPKRMPVIADREVNHSS*LSRVLL
Trigger: GAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGAC...TTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCGTACCCAGCCGCAGGTaGGACGCGGCCACACGTCTT +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGVPSRR*DAATRL
Trigger: AAGACGTGTGGCCGCGTCCCACCTGCGGCTGGGTAC...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGGTACCCAGCCGCAGGTaGGACGCGGCCACACGTCTT +
Preference number: 4 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRVPSRR*DAATRL
Trigger: AAGACGTGTGGCCGCGTCCCACCTGCGGCTGGGTAC...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTCGTTTCTGCGTCTCGAAGTCGAACTCCTaGTCCTCCAGCCCCGTCATG +
Preference number: 4 (lower is better)
Translates to: TVKCATRHAALRRRRFCVSKSNS*SSSPVM
Trigger: CATGACGGGGCTGGAGGACCAGGAGTTCGACTTCGA...GACGCAGAAACGACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592223.5
CDS-3UTR CCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGGCGCCCTCGTCGCGCTaGTTAAACTCGAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: PTATVNHSSWLSRVLLELAPSSR*LNSKRN
Trigger: GTTCCTCTTCGAGTTTAACCAGCGCGACGAGGGCGC...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318065.9
ENST00000329101.8
ENST00000545796.5
CDS-3UTR CCA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGAGGCAGGTCGGCTCTTaGGTGGCAGGCGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRRQVGS*VAGGSG
Trigger: TCCACTCCCGCCTGCCACCCAAGAGCCGACCTGCCT...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp TTATTTAACAACCACACTGACAGTGGCCTCGAGGTAGGCCCAGCGTCAACACTGAAAGGAAGCCGGGGATaGCGTGGGGGACGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LFNNHTDSGLEVGPASTLKGSRG*RGGRLS
Trigger: AGAAAGGCGTCCCCCACGCCATCCCCGGCTTCCTTT...CAGTGTTGACGCTGGGCCTACCTCGAGGCCACTGTCAGTGTGGTTGTTAAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp GAGAACGGGCGAAGGCTGGTGCCCAGGGTGAGCCTGGGGAACCTGGCCTGCGTTATTAATGCACTGCTCTaGAAAGCAATCCTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: ENGRRLVPRVSLGNLACVINALL*KAILLY
Trigger: ATAGAGAAGGATTGCTTTCCAGAGCAGTGCATTAAT...AACGCAGGCCAGGTTCCCCAGGCTCACCCTGGGCACCAGCCTTCGCCCGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR CAA 72 bp TTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATaGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LFLSVSETQETR*CRSARYRPFLL
Trigger: CAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CAA 72 bp CACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTaGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGA +
Preference number: 4 (lower is better)
Translates to: HGYVQTDGMAFR*FLSVSETQETR
Trigger: TCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGGATCCGCCGGCGGGATaGTGCCCGGTGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: ACKIAIPICLFTVSSFRVDPPAG*CPVWRS
Trigger: AGACCTCCACACCGGGCATCATCCCGCCGGCGGATC...CACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp GGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGATCCGCCGGCGGGATaGTGCCCGGTGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: GACKIAIPICLFTVSSFRDPPAG*CPVWRS
Trigger: AGACCTCCACACCGGGCATCATCCCGCCGGCGGATC...CCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp GCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATTGCCGTACCCCGAGGGGTaGTCCGCCGGCGGGATGATG +
Preference number: 4 (lower is better)
Translates to: AQFYDALMVWLNKALPVLPYPEG*SAGGMM
Trigger: CATCATCCCGCCGGCGGATCACCCCTCGGGGTACGG...CAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp AAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTATGGTCTTGCGGGACTTaGCAGGGACGCCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: KKHPTRSCSRLTVRKMALWSCGT*QGRHLP
Trigger: TGGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCA...TAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACCACCTTGAGCGCCACTaGGGGCGGCTGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHHLERH*GRLLQG
Trigger: ACCCTGGAGCAGCCGCCCTCAGTGGCGCTCAAGGTG...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGAGAAGCCGCCCTTCCTaGTGTGCTGGAAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: PTATVNHSSWLSRVLLELRSRPS*CAGKRS
Trigger: ACTCCTCTTTCCAGCACATCAGGAAGGGCGGCTTCT...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCTTTCTCCACGAAAATaGCCTTGGAGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GALSPSATFCSVTSQPEPLSPRK*PWSPAG
Trigger: TCCTGCAGGACTCCAAGGTCATTTTCGTGGAGAAAG...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGCTTTCTCCACGAAAATaGCCTTGGAGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TFCSVTSQPEPPPAGAIQLSPRK*PWSPAG
Trigger: TCCTGCAGGACTCCAAGGTCATTTTCGTGGAGAAAG...CTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACAGGGCTGGTTATCCTCTaGTTCCGAAATGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: YVQTDGMAFRLFLSVSETGLVIL*FRNGGI
Trigger: GATCCCGCCATTTCGGAATCAGAGGATAACCAGCCC...TGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TACGGCGACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCGGGCTGGTTATCCTCTaGTTCCGAAATGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: YGDVVSASLEKAPHALMFGLVIL*FRNGGI
Trigger: GATCCCGCCATTTCGGAATCAGAGGATAACCAGCCC...GAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp GCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATTGTGCGGGAGTCCGAGGTaGCAGTGGCCCGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: AQFYDALMVWLNKALPVLCGSPR*QWPGLA
Trigger: TGCCAGCCCGGGCCACTGTCACCTCGGACTCCCGCA...CAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACCAGAGAATTCGGCTTGCACAGGTCCCGGTCAGTTTTCGCTTCCATCTCCCAGATACCCCTGCTGAACTaGGTGCTCCAATGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: TREFGLHRSRSVFASISQIPLLN*VLQCGN
Trigger: GTTGCCACATTGGAGCACTCAGTTCAGCAGGGGTAT...CTGGGAGATGGAAGCGAAAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR TCA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTGAGTGGTACCAGGTGTaGGTTCAGTTTATTTATTCA +
Preference number: 4 (lower is better)
Translates to: AIVPERTVQAVPSAGALSEWYQV*VQFIYS
Trigger: TGAATAAATAAACTGAACTCACACCTGGTACCACTC...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGGAGTGGTACCAGGTGTaGGTTCAGTTTATTTATTCA +
Preference number: 4 (lower is better)
Translates to: SNCVWAVPMKGPCTVGLPEWYQV*VQFIYS
Trigger: TGAATAAATAAACTGAACTCACACCTGGTACCACTC...CGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTGTCAGTTGGAGGTTCTaGGTGGTACCAGGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIVSWRF*VVPGVS
Trigger: ACTCACACCTGGTACCACTCAGAACCTCCAACTGAC...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCAGGCACTTCCAGTATTaGACCCCAGGGGTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFRHFQY*TPGVPE
Trigger: TTCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCT...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCATGTTACAAAAGAGCTaGGATGACAGACTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: RLCRSARYRPFLLREPFLMLQKS*DDRLED
Trigger: ATCTTCCAGTCTGTCATCTCAGCTCTTTTGTAACAT...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGATGTTACAAAAGAGCTaGGATGACAGACTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: QETRLCRSARYRPFLLREMLQKS*DDRLED
Trigger: ATCTTCCAGTCTGTCATCTCAGCTCTTTTGTAACAT...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GCTGAACTGAGTGCTCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGCACACAACGCAGGGCTaGGCATTAAAGTGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: AELSAPMWQLGVGARAGEHTTQG*ALKWRF
Trigger: AAAACGCCACTTTAATGCTCAGCCCTGCGTTGTGTG...CTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGAGCACTCAGTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
CDS-3UTR TCA 90 bp GGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGCATTCCCACGGCGGGTaGGGGGCAGGCAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GACKIAIPICLFTVSSFRHSHGG*GAGRLR
Trigger: CCTCAACCTGCCTGCCCCTCACCCGCCGTGGGAATG...CCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAAGTGCCCGCGCCCTGCTaGTGGGATCTGGCGCGGCGA +
Preference number: 4 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDEVPAPC*WDLARR
Trigger: TCGCCGCGCCAGATCCCAGCAGCAGGGCGCGGGCAC...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR GCA 90 bp AAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTACTGTACTGGGTGGTGTTaGCCAACCACGAGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: KSTPRAHVHGLRLERWRYCTGWC*PTTSRR
Trigger: CCGACGACTCGTGGTTGGGCAACACCACCCAGTACA...GTAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR GCA 90 bp TTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACTGTACTGGGTGGTGTTaGCCAACCACGAGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: FLSFSGHRWLGLTNGTSHCTGWC*PTTSRR
Trigger: CCGACGACTCGTGGTTGGGCAACACCACCCAGTACA...GTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTGTCCCAATGAAAAGCTaGAGCATCAGCGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: GALSPSATFCSVTSQPEPVPMKS*SISGSF
Trigger: GAATGAGCCGCTGATGCTGCAGCTTTTCATTGGGAC...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGGTCCCAATGAAAAGCTaGAGCATCAGCGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQVPMKS*SISGSF
Trigger: GAATGAGCCGCTGATGCTGCAGCTTTTCATTGGGAC...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TTATTTAACAACCACACTGACAGTGGCCTCGAGGTAGGCCCAGCGTCAACACTGCCGGATAGCTGTCCGTaGTCTGCTTCTCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: LFNNHTDSGLEVGPASTLPDSCP*SASPPE
Trigger: CTCTGGTGGAGAAGCAGAGCACGGACAGCTATCCGG...CAGTGTTGACGCTGGGCCTACCTCGAGGCCACTGTCAGTGTGGTTGTTAAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACATGACCTTGGAGTCCTaGAGGAAGTTGTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: FLSVSETQETRLCRSARYMTLES*RKLWPD
Trigger: GTCTGGCCACAACTTCCTGCAGGACTCCAAGGTCAT...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GCTGCTTTACGGCGACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTATGACCTTGGAGTCCTaGAGGAAGTTGTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: AALRRRRFCVFRKSTPRAMTLES*RKLWPD
Trigger: GTCTGGCCACAACTTCCTGCAGGACTCCAAGGTCAT...AGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCGTAAAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR GCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTAGGAGTGGGTGCTCGTaGTGGAGAGGTCATTTCGTA +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIRSGCS*WRGHFV
Trigger: TACGAAATGACCTCTCCAGCACGAGCACCCACTCCT...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGAGTGGGTGCTCGTaGTGGAGAGGTCATTTCGTA +
Preference number: 4 (lower is better)
Translates to: FLSVSETQETRLCRSARYRSGCS*WRGHFV
Trigger: TACGAAATGACCTCTCCAGCACGAGCACCCACTCCT...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGGGCGTGGGGTCAAACTaGGTGTGGGCCGTTCCCATG +
Preference number: 4 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRGVGSN*VWAVPM
Trigger: CATGGGAACGGCCCACACGCAGTTTGACCCCACGCC...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTACACACATGCAAATaGAGGCTATCCTGTAACAGG +
Preference number: 4 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSVHTCK*RLSCNR
Trigger: CCTGTTACAGGATAGCCTGCATTTGCATGTGTGTAC...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGATATGTACACACATaGAAATGCAGGCTATCCTGT +
Preference number: 4 (lower is better)
Translates to: SNCVRRENARPSEAAMDARYVHT*KCRLSC
Trigger: ACAGGATAGCCTGCATTTGCATGTGTGTACATATCT...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGAGGTTCCAAAACGGATaGCGGTTATTGCTGACAGGG +
Preference number: 4 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQRFQNG*RLLLTG
Trigger: CCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCT...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACGGGTCCTCCTCGAACTaGGTGAGACGAGAAAATGCA +
Preference number: 4 (lower is better)
Translates to: FLSVSETQETRLCRSARYGSSSN*VRRENA
Trigger: TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCC...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAACTAATTGTACAGAGTaGCCAGCAAGGCCTACACAA +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGATNCTE*PARPTQ
Trigger: TTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGT...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GCAGGAGTGTACGTGACAGCCCAGGAAACGTTCCAAATGTTGGAGACTCATACTCAAGAGACGCGATTGTaGCGGAGCGCACGGTACAGG +
Preference number: 4 (lower is better)
Translates to: AGVYVTAQETFQMLETHTQETRL*RSARYR
Trigger: CCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG...AGTATGAGTCTCCAACATTTGGAACGTTTCCTGGGCTGTCACGTACACTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AATGCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTACCTGCTGCTGGGATCTaGCGCGGCGACTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: NAQFYDALMVWLNKALPVPAAGI*RGDSAG
Trigger: GCCGGCGGAGTCGCCGCGCCAGATCCCAGCAGCAGG...TACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CCA 90 bp CCAGCCTGGATGCCCGTGGTCCCAGGAGATGAAGTTACCCCTGGAGAAGTGTCTAAACTTGGAAGGGACTaGAAAGCTGGTGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: PAWMPVVPGDEVTPGEVSKLGRD*KAGAWH
Trigger: ATGCCAAGCACCAGCTTTCCAGTCCCTTCCAAGTTT...AGACACTTCTCCAGGGGTAACTTCATCTCCTGGGACCACGGGCATCCAGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp GCTGCTTTACGGCGACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTGGCCAAGTGGAAACTTaGAAGGGACTGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: AALRRRRFCVFRKSTPRAGQVET*KGLESW
Trigger: CCAGCTTTCCAGTCCCTTCCAAGTTTCCACTTGGCC...AGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCGTAAAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGACATCGTGGAAAAACTaGTTATTGTTGTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: QETRLCRSARYRPFLLRETSWKN*LLLWYR
Trigger: CCTGTACCACAACAATAACCAGTTTTTCCACGATGT...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp TTATACATTCGCAAGAAGCAAAATAACCGTGACTATCTGAGTATGCAACCCCCGGGGAGGACAGGCTGCTaGCCGGGCTCAGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: LYIRKKQNNRDYLSMQPPGRTGC*PGSGTR
Trigger: CCTCGTGCCTGAGCCCGGCCAGCAGCCTGTCCTCCC...CGGGGGTTGCATACTCAGATAGTCACGGTTATTTTGCTTCTTGCGAATGTATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCCGGGGTCCGTGGTCTTaGGAGACACGCAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGRGPWS*ETRRET
Trigger: AGTCTCCCTGCGTGTCTCCCAAGACCACGGACCCCG...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp ATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAACACGCGCCGAGCTGGTGTACTaGGTGGTGTTGCCCAACCAC +
Preference number: 4 (lower is better)
Translates to: IDGSVSLTGHHTVKCATRAELVY*VVLPNH
Trigger: GTGGTTGGGCAACACCACCCAGTACACCAGCTCGGC...GCGTGTTGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCGAGAGGATGGCCTCGTaGCTGGTGGTGGACACGGTC +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGERMAS*LVVDTV
Trigger: GACCGTGTCCACCACCAGCCACGAGGCCATCCTCTC...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGACAGCGTGCGGCCGCTaGGTTGCGGGACGTGAACGC +
Preference number: 4 (lower is better)
Translates to: EPIFAHINVQLLAFSQLETACGR*VAGRER
Trigger: GCGTTCACGTCCCGCAACCCAGCGGCCGCACGCTGT...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp GGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGACAGCGTGCGGCCGCTaGGTTGCGGGACGTGAACGC +
Preference number: 4 (lower is better)
Translates to: GACKIAIPICLFTVSSFRTACGR*VAGRER
Trigger: GCGTTCACGTCCCGCAACCCAGCGGCCGCACGCTGT...CCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp CCCTTTTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATAGCATTCGATGGGGTTaGAGGCCACCTGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: PFSFPFQGIDGSVSLTGHSIRWG*RPPAGT
Trigger: TGTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCT...ATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp ATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAACACGCGCTGGGAGCATTCGATaGGGTTGGAGGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: IDGSVSLTGHHTVKCATRAGSIR*GWRPPA
Trigger: TGCAGGTGGCCTCCAACCCCATCGAATGCTCCCAGC...GCGTGTTGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTGACATGGTGGCCATCTaGGGCTTTCTCCACGAAAAT +
Preference number: 4 (lower is better)
Translates to: GALSPSATFCSVTSQPEPDMVAI*GFLHEN
Trigger: ATTTTCGTGGAGAAAGCCCCAGATGGCCACCATGTC...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CTGGAGAAGTGTCTCGGGGACGTCCGCCCAGCACAAAGCTCATTCACCATCCTTGACATGGTGGCCATCTaGGGCTTTCTCCACGAAAAT +
Preference number: 4 (lower is better)
Translates to: LEKCLGDVRPAQSSFTILDMVAI*GFLHEN
Trigger: ATTTTCGTGGAGAAAGCCCCAGATGGCCACCATGTC...AAGGATGGTGAATGAGCTTTGTGCTGGGCGGACGTCCCCGAGACACTTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGTTCTGTTTTTATAATTaGAACGTTGGCGGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLEFCFYN*NVGGKV
Trigger: TACCTTCCCGCCAACGTTCCAATTATAAAAACAGAA...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGAGGACTTAACCCCTaGCTCACCGGTCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFRGLNP*LTGPQV
Trigger: AACCTGTGGACCGGTGAGCCAGGGGTTAAGTCCTCT...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCAGAGGACTTAACCCCTaGCTCACCGGTCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFRGLNP*LTGPQV
Trigger: AACCTGTGGACCGGTGAGCCAGGGGTTAAGTCCTCT...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACAAGAGGACTTAACCCCTaGCTCACCGGTCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: YVQTDGMAFRLFLSVSETRGLNP*LTGPQV
Trigger: AACCTGTGGACCGGTGAGCCAGGGGTTAAGTCCTCT...TGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGAGAGGACTTAACCCCTaGCTCACCGGTCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: PTATVNHSSWLSRVLLELRGLNP*LTGPQV
Trigger: AACCTGTGGACCGGTGAGCCAGGGGTTAAGTCCTCT...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TACAACTGGTCCAACTCTTCAGGCTCTCGCTTGACCGTTACAGGAATAGGGGCCAGAGGACTTAACCCCTaGCTCACCGGTCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: YNWSNSSGSRLTVTGIGARGLNP*LTGPQV
Trigger: AACCTGTGGACCGGTGAGCCAGGGGTTAAGTCCTCT...GGCCCCTATTCCTGTAACGGTCAAGCGAGAGCCTGAAGAGTTGGACCAGTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGGAGCTGGGGTCGGGTaGCATCGCGAGCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: EPIFAHINVQLLAFSQLEGAGVG*HRELLA
Trigger: AGCCAGCAGCTCGCGATGCCACCCGACCCCAGCTCC...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp GCAGGAGTGTACGTGACAGCCCAGGAAACGTTCCAAATGTTGGAGACTCATACTGGCTGGCAACGCCCTTaGTGTAGGCAGCGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: AGVYVTAQETFQMLETHTGWQRP*CRQREK
Trigger: TTTCTCCCGCTGCCTACACCAAGGGCGTTGCCAGCC...AGTATGAGTCTCCAACATTTGGAACGTTTCCTGGGCTGTCACGTACACTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCGACAGTGGCCCGGGCTaGCAACGCCCTTGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTDSGPG*QRPWCR
Trigger: CCTACACCAAGGGCGTTGCCAGCCCGGGCCACTGTC...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAAGGGGTGCGTGGCCACTaGCCTGGGCACGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: GALIPKARVQVNRVSMNKGVRGH*PGHVLD
Trigger: GTCCAGGACGTGCCCAGGCCAGTGGCCACGCACCCC...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTGCTTTCCTTCTTGTTaGAGAGCCAATCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHCFPSC*RANLCT
Trigger: TGTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCA...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGAAGGCCCCTGCACGGTaGGTCTCCCGTGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: EPIFAHINVQLLAFSQLEKAPAR*VSRAQP
Trigger: GGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTT...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAGATGCCCTGATGGTCTaGTTAAATAAGGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGADALMV*LNKALP
Trigger: TGGAAGTGCCTTATTTAACCAGACCATCAGGGCATC...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTTGCAGACCGACGGGATaGCCTTCAGGTTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: GALSPSATFCSVTSQPEPCRPTG*PSGCFF
Trigger: AAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCA...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTGCAGACCGACGGGATaGCCTTCAGGTTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFCRPTG*PSGCFF
Trigger: AAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCA...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCGAGGAGAGGGGCTGCTaGGGCAGAGCGAGTGTTCGA +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGEERGC*GRASVR
Trigger: TCGAACACTCGCTCTGCCCCAGCAGCCCCTCTCCTC...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
3UTR CAA 72 bp GGAGAGGACTTAACCCCTGGCTCACCGGTCCACAGGTaGGAGCAGGCTCATAATCATCAGTGGGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GEDLTPGSPVHR*EQAHNHQWVLF
Trigger: AAACAGAACCCACTGATGATTATGAGCCTGCTCCAACCTGTGGACCGGTGAGCCAGGGGTTAAGTCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR TCA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCCCGTACCCCGAGGGGTaGTCCGCCGGCGGGATGATG +
Preference number: 4 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCPYPEG*SAGGMM
Trigger: CATCATCCCGCCGGCGGATCACCCCTCGGGGTACGG...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGGCCAGCTCTCCTCAGTaGCGCTGGCGCGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQASSPQ*RWRGAR
Trigger: CCTCGCCCCGCGCCAGCGTCACTGAGGAGAGCTGGC...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp TTATACATTCGCAAGAAGCAAAATAACCGTGACTATCTGAGTATGCAACCCCCGCACCTTGAGCGCCACTaGGGGCGGCTGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LYIRKKQNNRDYLSMQPPHLERH*GRLLQG
Trigger: ACCCTGGAGCAGCCGCCCTCAGTGGCGCTCAAGGTG...CGGGGGTTGCATACTCAGATAGTCACGGTTATTTTGCTTCTTGCGAATGTATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATAGAAGCCGCCCTTCCTaGTGTGCTGGAAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: DREALLGEDTSALLLFIHRSRPS*CAGKRS
Trigger: ACTCCTCTTTCCAGCACATCAGGAAGGGCGGCTTCT...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp CCCTTTTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATAGAAGCCGCCCTTCCTaGTGTGCTGGAAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: PFSFPFQGIDGSVSLTGHRSRPS*CAGKRS
Trigger: ACTCCTCTTTCCAGCACATCAGGAAGGGCGGCTTCT...ATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp CCCTTTTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATGGGCTGGTTATCCTCTaGTTCCGAAATGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: PFSFPFQGIDGSVSLTGHGLVIL*FRNGGI
Trigger: GATCCCGCCATTTCGGAATCAGAGGATAACCAGCCC...ATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp TACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACATGCAGACGTAGAAACTaGCGTGAACGGGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: YVQTDGMAFRLFLSVSETCRRRN*RERGWL
Trigger: TAACCAGCCCCGTTCACGTCAGTTTCTACGTCTGCA...TGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGTGCAGACGTAGAAACTaGCGTGAACGGGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: PTATVNHSSWLSRVLLELCRRRN*RERGWL
Trigger: TAACCAGCCCCGTTCACGTCAGTTTCTACGTCTGCA...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACGGGACATCACACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTTGCAGACGTAGAAACTaGCGTGAACGGGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: TGHHTVKCATRHAALRRRCRRRN*RERGWL
Trigger: TAACCAGCCCCGTTCACGTCAGTTTCTACGTCTGCA...ACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGTGTGATGTCCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp AAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTATGGCGGGAAGGTAGGTaGAACGCTGGTACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KKHPTRSCSRLTVRKMALWREGR*NAGTGF
Trigger: GAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCA...TAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCATACCCCTGCTGAACTaGGTGCTCCAATGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFIPLLN*VLQCGN
Trigger: GTTGCCACATTGGAGCACTCAGTTCAGCAGGGGTAT...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGAGTGGTACCAGGTGTaGGTTCAGTTTATTTATTCA +
Preference number: 4 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVEWYQV*VQFIYS
Trigger: TGAATAAATAAACTGAACTCACACCTGGTACCACTC...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCGGTAAAACCTCACAATaGAATGTGTTTGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSGKTSQ*NVFAVS
Trigger: AGAAACTGCAAACACATTTCATTGTGAGGTTTTACC...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTATGTTACAAAAGAGCTaGGATGACAGACTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGMLQKS*DDRLED
Trigger: ATCTTCCAGTCTGTCATCTCAGCTCTTTTGTAACAT...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACGCGAGCATGCGACTATaGACAAGCCTACGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: FLSVSETQETRLCRSARYASMRL*TSLRFQ
Trigger: TTGAAACCGTAGGCTTGTTCATAGTCGCATGCTCGC...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTTGTCCAGTAACCTATTaGTGTGCTATTCAAGTTACT +
Preference number: 4 (lower is better)
Translates to: AIVPERTVQAVPSAGALSCPVTY*CAIQVT
Trigger: AGTAACTTGAATAGCACATCAATAGGTTACTGGACA...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGGTGGTAAGGCTTCTGTaGAACAATCATCTTATAACT +
Preference number: 4 (lower is better)
Translates to: QETRLCRSARYRPFLLREVVRLL*NNHLIT
Trigger: AGTTATAAGATGATTGTTTCACAGAAGCCTTACCAC...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACCACACAACGCAGGGCTaGGCATTAAAGTGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: FLSVSETQETRLCRSARYHTTQG*ALKWRF
Trigger: AAAACGCCACTTTAATGCTCAGCCCTGCGTTGTGTG...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTTCAACCGTGTTTCAATaGATAAACCATGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLSTVFQ*INHAFW
Trigger: CCAAAAAGCATGGTTTATTCATTGAAACACGGTTGA...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTGTTTCTTTCCGTGAGTaGGACACAAGAGACGCGATT +
Preference number: 4 (lower is better)
Translates to: GALSPSATFCSVTSQPEPVSFRE*DTRDAI
Trigger: AATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAAC...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCGTTTCTTTCCGTGAGTaGGACACAAGAGACGCGATT +
Preference number: 4 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFVSFRE*DTRDAI
Trigger: AATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAAC...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGACGTTTCCTTTTCAATaGCAGTCCCCTGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQTFPFQ*QSPEKG
Trigger: GCCTTTCTCAGGGGACTGTCATTGAAAAGGAAACGT...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAATAACCGTGACTATCTaGGTATGCAACCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: SFPFQGIDGSVSLTGHHTITVTI*VCNPRP
Trigger: GGGGCGGGGGTTGCATACTCAGATAGTCACGGTTAT...TGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp TTATTTAACAACCACACTGACAGTGGCCTCGAGGTAGGCCCAGCGTCAACACTGCCCAACAGTTTGGTGTaGACGTGGGGATTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: LFNNHTDSGLEVGPASTLPNSLV*TWGFKG
Trigger: GCCCTTGAATCCCCACGTTCACACCAAACTGTTGGG...CAGTGTTGACGCTGGGCCTACCTCGAGGCCACTGTCAGTGTGGTTGTTAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp GTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACACGAGGTTATCTCGATaGGAGGACTCTCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VVSASLEKAPHALMFTAYTRLSR*EDSPGQ
Trigger: CTGCCCTGGAGAGTCCTCGCATCGAGATAACCTCGT...GTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR GCA 90 bp TGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAATCCGGGAGGACAGGCTaGTGGCCGGGCTCAGGCACG +
Preference number: 4 (lower is better)
Translates to: CKIAIPICLFTVSSFRVQSGRTG*WPGSGT
Trigger: CGTGCCTGAGCCCGGCCAGCAGCCTGTCCTCCCGGA...TTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp TTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTTGTACTGGGTGGTGTTaGCCAACCACGAGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: FPFQGIDGSVSLTGHHTVCTGWC*PTTSRR
Trigger: CCGACGACTCGTGGTTGGGCAACACCACCCAGTACA...AACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGCTCCCAGGTCCAGGCTaGTGTCGGTGGTCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: EPIFAHINVQLLAFSQLELPGPG*CRWSAR
Trigger: ACGCGCTGACCACCGACAGCAGCCTGGACCTGGGAG...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp GCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATTGGCCACTGAGGGCGGCTaGTCCAGGGTGGTCTTGCGG +
Preference number: 4 (lower is better)
Translates to: AQFYDALMVWLNKALPVLATEGG*SRVVLR
Trigger: CCGCAAGACCACCCTGGAGCAGCCGCCCTCAGTGGC...CAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGGTGGGACTTGGGCTaGACCTCAATCCGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: GMAFRLFLSVSETQETRLWWDLG*TSIRSS
Trigger: TGAGCTTCGGATTGAGGTGCAGCCCAAGTCCCACCA...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACTGGTGGGACTTGGGCTaGACCTCAATCCGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: VVSASLEKAPHALMFTAYWWDLG*TSIRSS
Trigger: TGAGCTTCGGATTGAGGTGCAGCCCAAGTCCCACCA...GTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR GCA 90 bp ATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCTGGTGGGACTTGGGCTaGACCTCAATCCGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: ICLFTVSSFRVQMHTRTPWWDLG*TSIRSS
Trigger: TGAGCTTCGGATTGAGGTGCAGCCCAAGTCCCACCA...GGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTACCGGATAGCTGTCCGTaGTCTGCTTCTCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLPDSCP*SASPPE
Trigger: CTCTGGTGGAGAAGCAGAGCACGGACAGCTATCCGG...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
ENST00000590313.5
CDS-3UTR GCA 90 bp TTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTCCGGATAGCTGTCCGTaGTCTGCTTCTCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: FPFQGIDGSVSLTGHHTVPDSCP*SASPPE
Trigger: CTCTGGTGGAGAAGCAGAGCACGGACAGCTATCCGG...AACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp TACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACCAGAGAATTCGGCTTaGACAGGTCCCGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: YVQTDGMAFRLFLSVSETPENSA*TGPGQF
Trigger: AAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGG...TGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGCCGCTGGCATCAGGGTaGTTCTCTGCGGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: EPIFAHINVQLLAFSQLEPLASG*FSADRA
Trigger: CGCCCTGTCCGCAGAGAAGCACCCTGATGCCAGCGG...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR GCA 90 bp CTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAATATTATTTCATTTACTaGTGTGGCAGCAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LEPQTQVPKRMPVIADREYYFIY*CGSRAG
Trigger: CCCGGCCCTGCTGCCACAGCAGTAAATGAAATAATA...TTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
CDS-3UTR GCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCAGGAGTGGGTGCTCGTaGTGGAGAGGTCATTTCGTA +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFRSGCS*WRGHFV
Trigger: TACGAAATGACCTCTCCAGCACGAGCACCCACTCCT...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAAACGGTGGGTCTCCCGTaGTCAGCCCGGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDETVGLP*SARPPP
Trigger: GGGAGGTGGCCGGGCTGAGCACGGGAGACCCACCGT...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCACGGTGGGTCTCCCGTaGTCAGCCCGGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCTVGLP*SARPPP
Trigger: GGGAGGTGGCCGGGCTGAGCACGGGAGACCCACCGT...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCACAAAGATGCGAGCATaGGACTATGAACAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPTKMRA*DYEQAY
Trigger: GTAGGCTTGTTCATAGTCGCATGCTCGCATCTTTGT...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCCGTGAGACGAGAAAATaGACGGCCGTCCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTRETRK*TAVRGG
Trigger: GCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACG...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCAGGGTCCTCCTCGAACTaGGTGAGACGAGAAAATGCA +
Preference number: 4 (lower is better)
Translates to: TAPGFLGSSSNCVRRENAGSSSN*VRRENA
Trigger: TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCC...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GCAGGAGTGTACGTGACAGCCCAGGAAACGTTCCAAATGTTGGAGACTCATACTGTCTTCACGGTTACGTaGAGACCGACGGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: AGVYVTAQETFQMLETHTVFTVT*RPTGWP
Trigger: AGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGAC...AGTATGAGTCTCCAACATTTGGAACGTTTCCTGGGCTGTCACGTACACTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CTCGTGCTGGAGAGGTCATTTCGTATTATTTCATTTACGTCATCCAGGTACAACGCTGGGCTGCAGGGCTaGAGGCAGGTCGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LVLERSFRIISFTSSRYNAGLQG*RQVGSW
Trigger: CCAAGAGCCGACCTGCCTGCAGCCCTGCAGCCCAGC...GTTGTACCTGGATGACGTAAATGAAATAATACGAAATGACCTCTCCAGCACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR GCA 90 bp AAAGATGGCGTTACCGTTGGCGGGAAGGTAGGTGAAACGCTGGTACTGGCTTCGCGGCGACGTCGTTTCTaGGTCTTTAGAAAAAGCACC +
Preference number: 4 (lower is better)
Translates to: KDGVTVGGKVGETLVLASRRRRF*VFRKST
Trigger: GGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCG...CGAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCAACGGTAACGCCATCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR GCA 90 bp GCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGGTGCCCCAGCCTGGATaGCCGTGGTCCCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: ACKIAIPICLFTVSSFRVVPQPG*PWSQEM
Trigger: CATCTCCTGGGACCACGGGCATCCAGGCTGGGGCAC...CACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp CAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAGCTGCACATCACCCCTaGAGCTCTGTCTCACAGACA +
Preference number: 4 (lower is better)
Translates to: QGIDGSVSLTGHHTVKCAAAHHP*SSVSQT
Trigger: TGTCTGTGAGACAGAGCTGCAGGGGTGATGTGCAGC...TGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGAACTGGTTATTGTTGTaGTACAGGCCCAAGCACGAG +
Preference number: 4 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQNWLLL*YRPKHE
Trigger: CTCGTGCTTGGGCCTGTACCACAACAATAACCAGTT...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp AAAGGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTCGTGCGGGGACGGCGTaGGCGAGTGGTGGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: KGACKIAIPICLFTVSSFRAGTA*ASGGVS
Trigger: ACTCACCCCACCACTCGCCCACGCCGTCCCCGCACG...AAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACAGCTGGTGTACTGGGTaGTGTTGCCCAACCACGAGT +
Preference number: 4 (lower is better)
Translates to: VVSASLEKAPHALMFTAYSWCTG*CCPTTS
Trigger: ACTCGTGGTTGGGCAACACCACCCAGTACACCAGCT...GTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp CCCTTTTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATAGCTGGTGTACTGGGTaGTGTTGCCCAACCACGAGT +
Preference number: 4 (lower is better)
Translates to: PFSFPFQGIDGSVSLTGHSWCTG*CCPTTS
Trigger: ACTCGTGGTTGGGCAACACCACCCAGTACACCAGCT...ATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGGCCGAGCTGGTGTACTaGGTGGTGTTGCCCAACCAC +
Preference number: 4 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRAELVY*VVLPNH
Trigger: GTGGTTGGGCAACACCACCCAGTACACCAGCTCGGC...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACCATGCAGCTGCACGATaGGGTGTCCTCCGGCCGACG +
Preference number: 4 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHHAAAR*GVLRPT
Trigger: CGTCGGCCGGAGGACACCCCATCGTGCAGCTGCATG...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTTGGTGTTGGAGAGGATaGCCTCGTGGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FQGIDGSVSLTGHHTVKCWCWRG*PRGWWW
Trigger: CCACCACCAGCCACGAGGCCATCCTCTCCAACACCA...ACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp TGGTTATCCTCTGATTCCGAAATGGCGGGATCTCAACCACCAGAGAATTCGGCTCCAGGACTTTGGTGTTaGAGAGGATGGCCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: WLSSDSEMAGSQPPENSAPGLWC*RGWPRG
Trigger: GCCACGAGGCCATCCTCTCCAACACCAAAGTCCTGG...AGCCGAATTCTCTGGTGGTTGAGATCCCGCCATTTCGGAATCAGAGGATAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp TACAACTGGTCCAACTCTTCAGGCTCTCGCTTGACCGTTACAGGAATAGGGGCCGGATCTCCAGGACTTTaGTGTTGGAGAGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: YNWSNSSGSRLTVTGIGAGSPGL*CWRGWP
Trigger: AGGCCATCCTCTCCAACACCAAAGTCCTGGAGATCC...GGCCCCTATTCCTGTAACGGTCAAGCGAGAGCCTGAAGAGTTGGACCAGTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGTCCTGCAGGAAGTTGTaGCCAGACAGGACCATCTTC +
Preference number: 4 (lower is better)
Translates to: PTATVNHSSWLSRVLLELSCRKL*PDRTIF
Trigger: GAAGATGGTCCTGTCTGGCCACAACTTCCTGCAGGA...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTACCGTTGGCGGGAAGGTTCCTGCAGGAAGTTGTaGCCAGACAGGACCATCTTC +
Preference number: 4 (lower is better)
Translates to: AHVHGLRLERWRYRWREGSCRKL*PDRTIF
Trigger: GAAGATGGTCCTGTCTGGCCACAACTTCCTGCAGGA...ACCTTCCCGCCAACGGTAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTGACATGGTGGCCATCTaGGGCTTTCTCCACGAAAAT +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIDMVAI*GFLHEN
Trigger: ATTTTCGTGGAGAAAGCCCCAGATGGCCACCATGTC...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GCTGCTTTACGGCGACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTGACATGGTGGCCATCTaGGGCTTTCTCCACGAAAAT +
Preference number: 4 (lower is better)
Translates to: AALRRRRFCVFRKSTPRADMVAI*GFLHEN
Trigger: ATTTTCGTGGAGAAAGCCCCAGATGGCCACCATGTC...AGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCGTAAAGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp GCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTACCGTTGGCGGGAAGGTCCTCTGATTCCGAAATaGCGGGATCTCAACCACCAG +
Preference number: 4 (lower is better)
Translates to: AHVHGLRLERWRYRWREGPLIPK*RDLNHQ
Trigger: CTGGTGGTTGAGATCCCGCCATTTCGGAATCAGAGG...ACCTTCCCGCCAACGGTAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp TACGGCGACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCGTGAAACGCTGGTACTaGCTTCGCTTTCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: YGDVVSASLEKAPHALMFVKRWY*LRFLFP
Trigger: CGGGAAGAGAAAGCGAAGCCAGTACCAGCGTTTCAC...GAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCACCGGTCCACAGGTTaGAGCAGGCTCATAATCATC +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFHRSTG*SRLIII
Trigger: GATGATTATGAGCCTGCTCCAACCTGTGGACCGGTG...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCGCGGGAGAAAGGTCGTaGAGCTTGGGGCTCACGCCA +
Preference number: 4 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTAGERS*SLGLTP
Trigger: TGGCGTGAGCCCCAAGCTCCACGACCTTTCTCCCGC...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGGCGTGGCCACTGGCCTaGGCACGTCCTGGACGGCGG +
Preference number: 4 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQAWPLA*ARPGRR
Trigger: CCGCCGTCCAGGACGTGCCCAGGCCAGTGGCCACGC...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCACTGAGTGCTCCAATGTaGCAACTAGGAGTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: TAPGFLGSSSNCVRRENALSAPM*QLGVGA
Trigger: AGCACCCACTCCTAGTTGCCACATTGGAGCACTCAG...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTTAATGTTCAGCTCCTaGCATTCAGTCAGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPLMFSS*HSVSWR
Trigger: CCTCCAACTGACTGAATGCCAGGAGCTGAACATTAA...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGGTCAATCACAGCTCCTaGCTTTCTAGGGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PTATVNHSSWLSRVLLELVNHSS*LSRVLL
Trigger: GAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGAC...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCAGTCAATCACAGCTCCTaGCTTTCTAGGGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TAPGFLGSSSNCVRRENAVNHSS*LSRVLL
Trigger: GAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGAC...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTATCGAAGTCGAACTCCTaGTCCTCCAGCCCCGTCATG +
Preference number: 4 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLSKSNS*SSSPVM
Trigger: CATGACGGGGCTGGAGGACCAGGAGTTCGACTTCGA...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318065.9
ENST00000590313.5
CDS-3UTR CCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGAGGCAGGTCGGCTCTTaGGTGGCAGGCGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: EPIFAHINVQLLAFSQLERQVGS*VAGGSG
Trigger: TCCACTCCCGCCTGCCACCCAAGAGCCGACCTGCCT...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp TGCTCGTGCTGGAGAGGTCATTTCGTATTATTTCATTTACGTCATCCAGGTACACTCTGGCAGCAGCCGTaGCCCGGCAGTCGGAGACTC +
Preference number: 4 (lower is better)
Translates to: CSCWRGHFVLFHLRHPGTLWQQP*PGSRRL
Trigger: GAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAG...TGTACCTGGATGACGTAAATGAAATAATACGAAATGACCTCTCCAGCACGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp CCCTTTTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATGTCACCCAGGGACTATaGTGCTACGTCCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: PFSFPFQGIDGSVSLTGHVTQGL*CYVQER
Trigger: TCTCTCCTGGACGTAGCACCATAGTCCCTGGGTGAC...ATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR CAA 72 bp GGAGTGTACGTGACAGCCCAGGAAACGTTCCAAATGTaGGAGACTCATACTAGAGTCCTCTCGCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GVYVTAQETFQM*ETHTRVLSQPS
Trigger: GGAAGGCTGCGAGAGGACTCTAGTATGAGTCTCCAACATTTGGAACGTTTCCTGGGCTGTCACGTACACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AAAGGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTCCCGGTGTGGAGGTCTaGAGGTTGTGGCACGGGGCC +
Preference number: 4 (lower is better)
Translates to: KGACKIAIPICLFTVSSFPGVEV*RLWHGA
Trigger: GGCCCCGTGCCACAACCTTCAGACCTCCACACCGGG...AAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGCCGTACCCCGAGGGGTaGTCCGCCGGCGGGATGATG +
Preference number: 4 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQPYPEG*SAGGMM
Trigger: CATCATCCCGCCGGCGGATCACCCCTCGGGGTACGG...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCCGTCCGCCGTCCCAATaGAAAGCTGCAGCATCAGCG +
Preference number: 4 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTRPPSQ*KAAASA
Trigger: CGCTGATGCTGCAGCTTTTCATTGGGACGGCGGACG...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCCAATGTCGGAGTTTCTaGGTTTCAGGATTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFQCRSF*VSGFRH
Trigger: GTGCCGGAATCCTGAAACTCAGAAACTCCGACATTG...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR TCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCCTTTCTCCACGAAAATaGCCTTGGAGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFLSPRK*PWSPAG
Trigger: TCCTGCAGGACTCCAAGGTCATTTTCGTGGAGAAAG...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR TCA 90 bp GACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTCTTTCTCCACGAAAATaGCCTTGGAGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: DVVSASLEKAPHALMFTALSPRK*PWSPAG
Trigger: TCCTGCAGGACTCCAAGGTCATTTTCGTGGAGAAAG...AGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp ACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTCGTTTCTGCGTCCTTTCTCCACGAAAATaGCCTTGGAGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TVKCATRHAALRRRRFCVLSPRK*PWSPAG
Trigger: TCCTGCAGGACTCCAAGGTCATTTTCGTGGAGAAAG...GACGCAGAAACGACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp ATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAACACGCGGGCTGGTTATCCTCTaGTTCCGAAATGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: IDGSVSLTGHHTVKCATRGLVIL*FRNGGI
Trigger: GATCCCGCCATTTCGGAATCAGAGGATAACCAGCCC...GCGTGTTGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp CCCTTTTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATTGCAGACGTAGAAACTaGCGTGAACGGGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: PFSFPFQGIDGSVSLTGHCRRRN*RERGWL
Trigger: TAACCAGCCCCGTTCACGTCAGTTTCTACGTCTGCA...ATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp TTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTTGGCGGGAAGGTAGGTaGAACGCTGGTACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FQGIDGSVSLTGHHTVKCWREGR*NAGTGF
Trigger: GAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCA...ACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTCAGCATACCCCTGCTaGACTGAGTGCTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: GMAFRLFLSVSETQETRLSAYPC*TECSNV
Trigger: CACATTGGAGCACTCAGTTCAGCAGGGGTATGCTGA...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGGTCAGTTGGAGGTTCTaGGTGGTACCAGGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: GMAFRLFLSVSETQETRLVSWRF*VVPGVS
Trigger: ACTCACACCTGGTACCACTCAGAACCTCCAACTGAC...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCAATGCTCAATTCTATaGTGCCCTGATGGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: GALSPSATFCSVTSQPEPQCSIL*CPDGLV
Trigger: AACCAGACCATCAGGGCATCATAGAATTGAGCATTG...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGCAATGCTCAATTCTATaGTGCCCTGATGGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWQCSIL*CPDGLV
Trigger: AACCAGACCATCAGGGCATCATAGAATTGAGCATTG...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATGGTAAAACCTCACAATaGAATGTGTTTGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHGKTSQ*NVFAVS
Trigger: AGAAACTGCAAACACATTTCATTGTGAGGTTTTACC...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTGGTAAAACCTCACAATaGAATGTGTTTGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGGKTSQ*NVFAVS
Trigger: AGAAACTGCAAACACATTTCATTGTGAGGTTTTACC...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCCACACAACGCAGGGCTaGGCATTAAAGTGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFHTTQG*ALKWRF
Trigger: AAAACGCCACTTTAATGCTCAGCCCTGCGTTGTGTG...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAATCAACCGTGTTTCAATaGATAAACCATGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKSTVFQ*INHAFW
Trigger: CCAAAAAGCATGGTTTATTCATTGAAACACGGTTGA...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCGGTTGTTTCTTTCCGTaGGTGAGACACAAGAGACGC +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFGCFFP*VRHKRR
Trigger: GCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACC...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AATGCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATCGGGCTTCCTCCGCTaGCTTCATGGTGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: NAQFYDALMVWLNKALPVSGFLR*LHGAAG
Trigger: GCCGGCGGCACCATGAAGTCAGCGGAGGAAGCCCGA...TACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397790.6
CDS-3UTR GCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCCCGCGCTCTGCCTCCTaGCTTTTTAAAGCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFPRSAS*LFKAGK
Trigger: TTTTCCAGCTTTAAAAAGGCAGGAGGCAGAGCGCGG...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253506.9
CDS-3UTR GCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTGCTGACGTTGGAGGATaGATAGCCATAGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIADVGG*IAIVFF
Trigger: GAAGAACACTATGGCTATGCATCCTCCAACGTCAGC...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253506.9
ENST00000427363.7
CDS-3UTR GCA 90 bp TTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCTCAGTTTTTACGAGGTTATCTCGATaGGAGGACTCTCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FTVSSFRVQMHTRTPSVFTRLSR*EDSPGQ
Trigger: CTGCCCTGGAGAGTCCTCGCATCGAGATAACCTCGT...AAAAACTGAGGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACTCCCAGGTCCAGGCTaGTGTCGGTGGTCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: GALIPKARVQVNRVSMNKLPGPG*CRWSAR
Trigger: ACGCGCTGACCACCGACAGCAGCCTGGACCTGGGAG...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCGCCACTGAGGGCGGCTaGTCCAGGGTGGTCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCATEGG*SRVVLR
Trigger: CCGCAAGACCACCCTGGAGCAGCCGCCCTCAGTGGC...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGGGGTTGGAGGCCACCTaGAGGGACAGCGTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQGLEAT*RDSVRP
Trigger: CGGCCGCACGCTGTCCCTGCAGGTGGCCTCCAACCC...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCCCGGATAGCTGTCCGTaGTCTGCTTCTCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGPDSCP*SASPPE
Trigger: CTCTGGTGGAGAAGCAGAGCACGGACAGCTATCCGG...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CCCTTTTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATATGACCTTGGAGTCCTaGAGGAAGTTGTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: PFSFPFQGIDGSVSLTGHMTLES*RKLWPD
Trigger: GTCTGGCCACAACTTCCTGCAGGACTCCAAGGTCAT...ATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp TTATTTAACAACCACACTGACAGTGGCCTCGAGGTAGGCCCAGCGTCAACACTGCCAGAGAATTCGGCTTaGACAGGTCCCGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LFNNHTDSGLEVGPASTLPENSA*TGPGQF
Trigger: AAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGG...CAGTGTTGACGCTGGGCCTACCTCGAGGCCACTGTCAGTGTGGTTGTTAAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp CAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCACCAGAGAATTCGGCTTaGACAGGTCCCGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: QGIDGSVSLTGHHTVKCAPENSA*TGPGQF
Trigger: AAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGG...TGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGTATTCAAGTTACTTGTaGTATGTTCGAAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: QETRLCRSARYRPFLLREYSSYL*YVRSQI
Trigger: AATCTGGCTTCGAACATAGCACAAGTAACTTGAATA...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTTATTCAAGTTACTTGTaGTATGTTCGAAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLYSSYL*YVRSQI
Trigger: AATCTGGCTTCGAACATAGCACAAGTAACTTGAATA...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCTGTAACAGGTTTTTCTaGTTTTGTCCAGTAACCTAT +
Preference number: 4 (lower is better)
Translates to: RLCRSARYRPFLLREPFLCNRFF*FCPVTY
Trigger: ATAGGTTACTGGACAAAAGCAGAAAAACCTGTTACA...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCTGTAACAGGTTTTTCTaGTTTTGTCCAGTAACCTAT +
Preference number: 4 (lower is better)
Translates to: SNCVRRENARPSEAAMDACNRFF*FCPVTY
Trigger: ATAGGTTACTGGACAAAAGCAGAAAAACCTGTTACA...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGGTACACACATGCAAATaGAGGCTATCCTGTAACAGG +
Preference number: 4 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWVHTCK*RLSCNR
Trigger: CCTGTTACAGGATAGCCTGCATTTGCATGTGTGTAC...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AATGCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTAGCTGGGCTGCAGGGCTaGAGGCAGGTCGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: NAQFYDALMVWLNKALPVAGLQG*RQVGSW
Trigger: CCAAGAGCCGACCTGCCTGCAGCCCTGCAGCCCAGC...TACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTACGGGTACGAGTAGTTaGACTCGTAGGAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: FPFQGIDGSVSLTGHHTVTGTSS*TRRRRP
Trigger: AGGCCTCCTCCTACGAGTCCAACTACTCGTACCCGT...AACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAATGCCATGGCGACGTCTaGGGGGACGCGTACGGGTAC +
Preference number: 4 (lower is better)
Translates to: GALIPKARVQVNRVSMNKCHGDV*GDAYGY
Trigger: GTACCCGTACGCGTCCCCCCAGACGTCGCCATGGCA...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp TTATACATTCGCAAGAAGCAAAATAACCGTGACTATCTGAGTATGCAACCCCCGGGCACCGCCAGGTACTaGTCGCAGAAGCCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LYIRKKQNNRDYLSMQPPGTARY*SQKPPF
Trigger: GAAGGGCGGCTTCTGCGACCAGTACCTGGCGGTGCC...CGGGGGTTGCATACTCAGATAGTCACGGTTATTTTGCTTCTTGCGAATGTATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGAGAGGATGGCCTCGTaGCTGGTGGTGGACACGGTC +
Preference number: 4 (lower is better)
Translates to: EPIFAHINVQLLAFSQLEERMAS*LVVDTV
Trigger: GACCGTGTCCACCACCAGCCACGAGGCCATCCTCTC...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCCCAGGACTTTGGTGTTaGAGAGGATGGCCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGPGLWC*RGWPRG
Trigger: GCCACGAGGCCATCCTCTCCAACACCAAAGTCCTGG...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTCCAGGACTTTGGTGTTaGAGAGGATGGCCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: FQGIDGSVSLTGHHTVKCPGLWC*RGWPRG
Trigger: GCCACGAGGCCATCCTCTCCAACACCAAAGTCCTGG...ACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGATCTCCAGGACTTTaGTGTTGGAGAGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: VVSASLEKAPHALMFTAYGSPGL*CWRGWP
Trigger: AGGCCATCCTCTCCAACACCAAAGTCCTGGAGATCC...GTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTCCTGCAGGAAGTTGTaGCCAGACAGGACCATCTTC +
Preference number: 4 (lower is better)
Translates to: GMAFRLFLSVSETQETRLSCRKL*PDRTIF
Trigger: GAAGATGGTCCTGTCTGGCCACAACTTCCTGCAGGA...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTCCTGCAGGAAGTTGTaGCCAGACAGGACCATCTTC +
Preference number: 4 (lower is better)
Translates to: LSFSGHRWLGLTNGTSHSSCRKL*PDRTIF
Trigger: GAAGATGGTCCTGTCTGGCCACAACTTCCTGCAGGA...ACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp CCCTTTTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATTCCTGCAGGAAGTTGTaGCCAGACAGGACCATCTTC +
Preference number: 4 (lower is better)
Translates to: PFSFPFQGIDGSVSLTGHSCRKL*PDRTIF
Trigger: GAAGATGGTCCTGTCTGGCCACAACTTCCTGCAGGA...ATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATGTGAAACGCTGGTACTaGCTTCGCTTTCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: DREALLGEDTSALLLFIHVKRWY*LRFLFP
Trigger: CGGGAAGAGAAAGCGAAGCCAGTACCAGCGTTTCAC...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAAAAAGGTCGTGGAGCTTaGGGCTCACGCCAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: GALIPKARVQVNRVSMNKKGRGA*GSRQGP
Trigger: CGGCCCCTGGCGTGAGCCCCAAGCTCCACGACCTTT...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCGGCTGGCAACGCCCTTaGTGTAGGCAGCGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTGWQRP*CRQREK
Trigger: TTTCTCCCGCTGCCTACACCAAGGGCGTTGCCAGCC...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAACGTCCGAGGCGGCGATaGACGCCAGCAAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDERPRRR*TPARAA
Trigger: CGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACATTTTCAGGGCATCGATaGCTCGGTCTCACTAACGGG +
Preference number: 4 (lower is better)
Translates to: SFPFQGIDGSVSLTGHHTFSGHR*LGLTNG
Trigger: CCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAA...TGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp TGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAACTTCCCCGCGAGGGCTaGGCTGGGGGCTGCACATCA +
Preference number: 4 (lower is better)
Translates to: CKIAIPICLFTVSSFRVQLPREG*AGGCTS
Trigger: TGATGTGCAGCCCCCAGCCCAGCCCTCGCGGGGAAG...TTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR TCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAAGCGGCTGCCGGCCGTTaGGGCTGTACTTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: GALIPKARVQVNRVSMNKAAAGR*GCTSSC
Trigger: ACAAGAGGAAGTACAGCCTCAACGGCCGGCAGCCGC...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp GGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTATTAGTCGTCGGTCACGCTaGCCCGCGGGGAGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: GLKAKFIPKGACKIAIPISRRSR*PAGSRA
Trigger: CGCACGGCTCCCCGCGGGTCAGCGTGACCGACGACT...AATAGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp GCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATTGAAGCTCATACGGGCCTaGGTGGGACGGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: AQFYDALMVWLNKALPVLKLIRA*VGRQLP
Trigger: TGGCAGCTGCCGTCCCACTCAGGCCCGTATGAGCTT...CAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCGTCCGCCGTCCCAATaGAAAGCTGCAGCATCAGCG +
Preference number: 4 (lower is better)
Translates to: ACKIAIPICLFTVSSFRVRPPSQ*KAAASA
Trigger: CGCTGATGCTGCAGCTTTTCATTGGGACGGCGGACG...CACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp CAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCACAATGTCGGAGTTTCTaGGTTTCAGGATTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: QGIDGSVSLTGHHTVKCAQCRSF*VSGFRH
Trigger: GTGCCGGAATCCTGAAACTCAGAAACTCCGACATTG...TGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACAGGCAGCTCCTGAGCTaGGCGCTGGGAGCATTCGAT +
Preference number: 4 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHRQLLS*ALGAFD
Trigger: ATCGAATGCTCCCAGCGCTCAGCTCAGGAGCTGCCT...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGAGGCAGCTCCTGAGCTaGGCGCTGGGAGCATTCGAT +
Preference number: 4 (lower is better)
Translates to: GACKIAIPICLFTVSSFRRQLLS*ALGAFD
Trigger: ATCGAATGCTCCCAGCGCTCAGCTCAGGAGCTGCCT...CCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp CTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTCTTTCTCCACGAAAATaGCCTTGGAGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSFSGHRWLGLTNGTSHSLSPRK*PWSPAG
Trigger: TCCTGCAGGACTCCAAGGTCATTTTCGTGGAGAAAG...ACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp AAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTATGCAGACGTAGAAACTaGCGTGAACGGGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: KKHPTRSCSRLTVRKMALCRRRN*RERGWL
Trigger: TAACCAGCCCCGTTCACGTCAGTTTCTACGTCTGCA...TAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTAATACCCCTGCTGAACTaGGTGCTCCAATGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLIPLLN*VLQCGN
Trigger: GTTGCCACATTGGAGCACTCAGTTCAGCAGGGGTAT...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
ENST00000590313.5
CDS-3UTR TCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTCCCTTCTGTTGTCATaGGATGACTTCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GMAFRLFLSVSETQETRLSLLLS*DDFSSR
Trigger: CCTGGAGGAGAAGTCATCTCATGACAACAGAAGGGA...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AATGCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATGTGGGCCGTTCCCATaGAAGGCCCCTGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: NAQFYDALMVWLNKALPVCGPFP*KAPARW
Trigger: CCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACA...TACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTCAATGCTCAATTCTATaGTGCCCTGATGGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIQCSIL*CPDGLV
Trigger: AACCAGACCATCAGGGCATCATAGAATTGAGCATTG...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGGCGAGCATGCGACTATaGACAAGCCTACGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: GMAFRLFLSVSETQETRLASMRL*TSLRFQ
Trigger: TTGAAACCGTAGGCTTGTTCATAGTCGCATGCTCGC...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCATCAACCGTGTTTCAATaGATAAACCATGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGASTVFQ*INHAFW
Trigger: CCAAAAAGCATGGTTTATTCATTGAAACACGGTTGA...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTAACTACAAAGACAGCTaGCACAGACATCAAACGTTT +
Preference number: 4 (lower is better)
Translates to: TVQAVPSAGALSPSATFCNYKDS*HRHQTF
Trigger: AAACGTTTGATGTCTGTGTCAGCTGTCTTTGTAGTT...ACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACGGGACATCACACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTCCATTTTCCACATCTTaGGAGGCCTTTCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: TGHHTVKCATRHAALRRRPFSTS*EAFPEL
Trigger: AAGCTCTGGAAAGGCCTCTCAAGATGTGGAAAATGG...ACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGTGTGATGTCCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp GGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTATTGTGCCCGCGCCCTGCTaGTGGGATCTGGCGCGGCGA +
Preference number: 4 (lower is better)
Translates to: GLKAKFIPKGACKIAIPIVPAPC*WDLARR
Trigger: TCGCCGCGCCAGATCCCAGCAGCAGGGCGCGGGCAC...AATAGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp GTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGTCCCAATGAAAAGCTaGAGCATCAGCGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: VVSASLEKAPHALMFTAYVPMKS*SISGSF
Trigger: GAATGAGCCGCTGATGCTGCAGCTTTTCATTGGGAC...GTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR GCA 90 bp TGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAACCAGAGAATTCGGCTTaGACAGGTCCCGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: CVFRKSTPRAHVHGLRLEPENSA*TGPGQF
Trigger: AAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGG...TTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR GCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAAATCAGGGTGCTTCTCTaGGGACAGGGCGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: GALIPKARVQVNRVSMNKIRVLL*GQGGKP
Trigger: CGGCTTCCCGCCCTGTCCGCAGAGAAGCACCCTGAT...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AATGCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTACCGCTGGCATCAGGGTaGTTCTCTGCGGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: NAQFYDALMVWLNKALPVPLASG*FSADRA
Trigger: CGCCCTGTCCGCAGAGAAGCACCCTGATGCCAGCGG...TACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GCAGGAGTGTACGTGACAGCCCAGGAAACGTTCCAAATGTTGGAGACTCATACTAGGAGTGGGTGCTCGTaGTGGAGAGGTCATTTCGTA +
Preference number: 4 (lower is better)
Translates to: AGVYVTAQETFQMLETHTRSGCS*WRGHFV
Trigger: TACGAAATGACCTCTCCAGCACGAGCACCCACTCCT...AGTATGAGTCTCCAACATTTGGAACGTTTCCTGGGCTGTCACGTACACTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCCCCATGAAAGGCCCCTaGACGGTGGGTCTCCCGTGC +
Preference number: 4 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCPMKGP*TVGLPC
Trigger: GCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGG...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTACAAAGATGCGAGCATaGGACTATGAACAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALITKMRA*DYEQAY
Trigger: GTAGGCTTGTTCATAGTCGCATGCTCGCATCTTTGT...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAAGTAACCTATTGATGTaGTATTCAAGTTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKSNLLM*YSSYLC
Trigger: GCACAAGTAACTTGAATAGCACATCAATAGGTTACT...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTGTACACACATGCAAATaGAGGCTATCCTGTAACAGG +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIVHTCK*RLSCNR
Trigger: CCTGTTACAGGATAGCCTGCATTTGCATGTGTGTAC...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCAGATATGTACACACATaGAAATGCAGGCTATCCTGT +
Preference number: 4 (lower is better)
Translates to: GSPFSISDVLFSDFTAGARYVHT*KCRLSC
Trigger: ACAGGATAGCCTGCATTTGCATGTGTGTACATATCT...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATTGCGTGAGACGAGAAAATaGACGGCCGTCCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: AQFYDALMVWLNKALPVLRETRK*TAVRGG
Trigger: GCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACG...CAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GCAGGAGTGTACGTGACAGCCCAGGAAACGTTCCAAATGTTGGAGACTCATACTGGGTCCTCCTCGAACTaGGTGAGACGAGAAAATGCA +
Preference number: 4 (lower is better)
Translates to: AGVYVTAQETFQMLETHTGSSSN*VRRENA
Trigger: TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCC...AGTATGAGTCTCCAACATTTGGAACGTTTCCTGGGCTGTCACGTACACTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGAAACTTGGAAGGGACTaGAAAGCTGGTGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: PTATVNHSSWLSRVLLELKLGRD*KAGAWH
Trigger: ATGCCAAGCACCAGCTTTCCAGTCCCTTCCAAGTTT...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CCA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCAAACTGGTTATTGTTGTaGTACAGGCCCAAGCACGAG +
Preference number: 4 (lower is better)
Translates to: TAPGFLGSSSNCVRRENANWLLL*YRPKHE
Trigger: CTCGTGCTTGGGCCTGTACCACAACAATAACCAGTT...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GCTGAACTGAGTGCTCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGTCCACCTCCACATCGTaGAAAAACTGGTTATTGTTG +
Preference number: 4 (lower is better)
Translates to: AELSAPMWQLGVGARAGESTSTS*KNWLLL
Trigger: CAACAATAACCAGTTTTTCCACGATGTGGAGGTGGA...CTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGAGCACTCAGTTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253506.9
ENST00000318065.9
CDS-3UTR CCA 90 bp AATGCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTAGACTCAGCGTGGCCGTaGAGGGGGACCGTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: NAQFYDALMVWLNKALPVDSAWP*RGTVWS
Trigger: GCTCCAAACGGTCCCCCTCCACGGCCACGCTGAGTC...TACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp TGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAATGGGCAGACTCAGCGTaGCCGTGGAGGGGGACCGTT +
Preference number: 4 (lower is better)
Translates to: CKIAIPICLFTVSSFRVQWADSA*PWRGTV
Trigger: AACGGTCCCCCTCCACGGCCACGCTGAGTCTGCCCA...TTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp ATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACTGGCCTCGTGGCTGGTaGTGGACACGGTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: IAIPICLFTVSSFRVQMHWPRGW*WTRSSL
Trigger: CAGGGAAGACCGTGTCCACCACCAGCCACGAGGCCA...GTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp ATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACGGATGGCCTCGTGGCTaGTGGTGGACACGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: IAIPICLFTVSSFRVQMHGWPRG*WWTRSS
Trigger: GGAAGACCGTGTCCACCACCAGCCACGAGGCCATCC...GTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAAGAGAGGATGGCCTCGTaGCTGGTGGTGGACACGGTC +
Preference number: 4 (lower is better)
Translates to: GALIPKARVQVNRVSMNKERMAS*LVVDTV
Trigger: GACCGTGTCCACCACCAGCCACGAGGCCATCCTCTC...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCCAGGTACAACTGGTCCAACTCTTCAGGCTCTCGCTTGACCGTTACAGGAATATCCTGCAGGAAGTTGTaGCCAGACAGGACCATCTTC +
Preference number: 4 (lower is better)
Translates to: SRYNWSNSSGSRLTVTGISCRKL*PDRTIF
Trigger: GAAGATGGTCCTGTCTGGCCACAACTTCCTGCAGGA...TATTCCTGTAACGGTCAAGCGAGAGCCTGAAGAGTTGGACCAGTTGTACCTGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp GCAGGAGTGTACGTGACAGCCCAGGAAACGTTCCAAATGTTGGAGACTCATACTCCTCTGATTCCGAAATaGCGGGATCTCAACCACCAG +
Preference number: 4 (lower is better)
Translates to: AGVYVTAQETFQMLETHTPLIPK*RDLNHQ
Trigger: CTGGTGGTTGAGATCCCGCCATTTCGGAATCAGAGG...AGTATGAGTCTCCAACATTTGGAACGTTTCCTGGGCTGTCACGTACACTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGGCTGGCAACGCCCTTaGTGTAGGCAGCGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: EPIFAHINVQLLAFSQLEGWQRP*CRQREK
Trigger: TTTCTCCCGCTGCCTACACCAAGGGCGTTGCCAGCC...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAAGACAGTGGCCCGGGCTaGCAACGCCCTTGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDEDSGPG*QRPWCR
Trigger: CCTACACCAAGGGCGTTGCCAGCCCGGGCCACTGTC...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTTTAATGTTCAGCTCCTaGCATTCAGTCAGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALILMFSS*HSVSWR
Trigger: CCTCCAACTGACTGAATGCCAGGAGCTGAACATTAA...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACAGAAGGGCTGGGCGTaGGGTCAAACTGCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GALIPKARVQVNRVSMNKQKGWA*GQTACG
Trigger: CCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTG...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AATGCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTAGGGTGCCAGAAGGGCTaGGCGTGGGGTCAAACTGCG +
Preference number: 4 (lower is better)
Translates to: NAQFYDALMVWLNKALPVGCQKG*AWGQTA
Trigger: CGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCC...TACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTGATGCCCTGATGGTCTaGTTAAATAAGGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: GASTRRCNSGRFHKGALIDALMV*LNKALP
Trigger: TGGAAGTGCCTTATTTAACCAGACCATCAGGGCATC...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAAACAGGGAAGCCCTCCTaGGCGAGGACACGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDETGKPS*ARTRRL
Trigger: GAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGT...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAAGAGGAGAGGGGCTGCTaGGGCAGAGCGAGTGTTCGA +
Preference number: 4 (lower is better)
Translates to: GALIPKARVQVNRVSMNKEERGC*GRASVR
Trigger: TCGAACACTCGCTCTGCCCCAGCAGCCCCTCTCCTC...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCTCATCCAGGTACAACTaGTCCAACTCTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFSSRYN*SNSSGS
Trigger: AGAGCCTGAAGAGTTGGACCAGTTGTACCTGGATGA...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp TACGGCGACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCTTACGGTTAGAAAGATaGCGTTACCGTTGGCGGGAA +
Preference number: 4 (lower is better)
Translates to: YGDVVSASLEKAPHALMFLRLER*RYRWRE
Trigger: TTCCCGCCAACGGTAACGCCATCTTTCTAACCGTAA...GAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp TGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAGAAGGTGCCCCAGCCTaGATGCCCGTGGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: CKIAIPICLFTVSSFRVQEGAPA*MPVVPG
Trigger: TCCTGGGACCACGGGCATCCAGGCTGGGGCACCTTC...TTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp CCCTTTTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATGGAGTCCCAACAGTTTaGTGTGAACGTGGGGATTCA +
Preference number: 4 (lower is better)
Translates to: PFSFPFQGIDGSVSLTGHGVPTV*CERGDS
Trigger: TGAATCCCCACGTTCACACCAAACTGTTGGGACTCC...ATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp TGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAGTGCAGCCGAGACACTaGGCAGGGGGTGCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: CKIAIPICLFTVSSFRVQVQPRH*AGGAGE
Trigger: CTCTCCTGCACCCCCTGCCCAGTGTCTCGGCTGCAC...TTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR TCA 90 bp AAAGGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTGCGGCTGCCGGCCGTTaGGGCTGTACTTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: KGACKIAIPICLFTVSSFAAAGR*GCTSSC
Trigger: ACAAGAGGAAGTACAGCCTCAACGGCCGGCAGCCGC...AAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp TTATACATTCGCAAGAAGCAAAATAACCGTGACTATCTGAGTATGCAACCCCCGTGGTCTTGCGGGACTTaGCAGGGACGCCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: LYIRKKQNNRDYLSMQPPWSCGT*QGRHLP
Trigger: TGGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCA...CGGGGGTTGCATACTCAGATAGTCACGGTTATTTTGCTTCTTGCGAATGTATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp GGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTATTCGACGGGCTCCACCTTaGGCGCCACTGAGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GLKAKFIPKGACKIAIPIRRAPP*APLRAA
Trigger: AGCCGCCCTCAGTGGCGCTCAAGGTGGAGCCCGTCG...AATAGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp TGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAAAGCTCATACGGGCCTaGGTGGGACGGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: CKIAIPICLFTVSSFRVQKLIRA*VGRQLP
Trigger: TGGCAGCTGCCGTCCCACTCAGGCCCGTATGAGCTT...TTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp CTCGTGCTGGAGAGGTCATTTCGTATTATTTCATTTACGTCATCCAGGTACAACCGTCCGCCGTCCCAATaGAAAGCTGCAGCATCAGCG +
Preference number: 4 (lower is better)
Translates to: LVLERSFRIISFTSSRYNRPPSQ*KAAASA
Trigger: CGCTGATGCTGCAGCTTTTCATTGGGACGGCGGACG...GTTGTACCTGGATGACGTAAATGAAATAATACGAAATGACCTCTCCAGCACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR TCA 90 bp TGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAACAATGTCGGAGTTTCTaGGTTTCAGGATTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: CVFRKSTPRAHVHGLRLEQCRSF*VSGFRH
Trigger: GTGCCGGAATCCTGAAACTCAGAAACTCCGACATTG...TTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR TCA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACTGGCGGGAAGGTAGGTaGAACGCTGGTACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHWREGR*NAGTGF
Trigger: GAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCA...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGTGGCGGGAAGGTAGGTaGAACGCTGGTACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GACKIAIPICLFTVSSFRWREGR*NAGTGF
Trigger: GAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCA...CCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp ACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTGTCCAGTAACCTATTaGTGTGCTATTCAAGTTACT +
Preference number: 4 (lower is better)
Translates to: TVQAVPSAGALSPSATFCCPVTY*CAIQVT
Trigger: AGTAACTTGAATAGCACATCAATAGGTTACTGGACA...ACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTGTCCAGTAACCTATTaGTGTGCTATTCAAGTTACT +
Preference number: 4 (lower is better)
Translates to: GSPFSISDVLFSDFTAGACPVTY*CAIQVT
Trigger: AGTAACTTGAATAGCACATCAATAGGTTACTGGACA...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGAACTACAAAGACAGCTaGCACAGACATCAAACGTTT +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLNYKDS*HRHQTF
Trigger: AAACGTTTGATGTCTGTGTCAGCTGTCTTTGTAGTT...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTACGCTGACGTTGGAGGATaGATAGCCATAGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: KSTPRAHVHGLRLERWRYADVGG*IAIVFF
Trigger: GAAGAACACTATGGCTATGCATCCTCCAACGTCAGC...GTAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR GCA 90 bp GGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTATTGAGTGGGACGGCAGCTaGCAGTCCAGGGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GLKAKFIPKGACKIAIPIEWDGS*QSRAGR
Trigger: CCTGCCCGCCCTGGACTGGCAGCTGCCGTCCCACTC...AATAGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCTGGTGGGACTTGGGCTaGACCTCAATCCGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTWWDLG*TSIRSS
Trigger: TGAGCTTCGGATTGAGGTGCAGCCCAAGTCCCACCA...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTATTCCTGCAGGGACAGCGTaGGGCCGCTGGGTTGCGGGA +
Preference number: 4 (lower is better)
Translates to: GLKAKFIPKGACKIAIPIPAGTA*GRWVAG
Trigger: TCCCGCAACCCAGCGGCCGCACGCTGTCCCTGCAGG...AATAGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCATGACCTTGGAGTCCTaGAGGAAGTTGTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGMTLES*RKLWPD
Trigger: GTCTGGCCACAACTTCCTGCAGGACTCCAAGGTCAT...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCCCAGAGAATTCGGCTTaGACAGGTCCCGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGPENSA*TGPGQF
Trigger: AAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGG...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGCCGCTGGCATCAGGGTaGTTCTCTGCGGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLPLASG*FSADRA
Trigger: CGCCCTGTCCGCAGAGAAGCACCCTGATGCCAGCGG...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR GCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTATTATTTCATTTACTaGTGTGGCAGCAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GMAFRLFLSVSETQETRLYYFIY*CGSRAG
Trigger: CCCGGCCCTGCTGCCACAGCAGTAAATGAAATAATA...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
CDS-3UTR GCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCACAAAGATGCGAGCATaGGACTATGAACAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFTKMRA*DYEQAY
Trigger: GTAGGCTTGTTCATAGTCGCATGCTCGCATCTTTGT...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTTGTAACAGGTTTTTCTaGTTTTGTCCAGTAACCTAT +
Preference number: 4 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSCNRFF*FCPVTY
Trigger: ATAGGTTACTGGACAAAAGCAGAAAAACCTGTTACA...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCATGTAACAGGTTTTTCTaGTTTTGTCCAGTAACCTAT +
Preference number: 4 (lower is better)
Translates to: SATFCSVTSQPEPPPAGACNRFF*FCPVTY
Trigger: ATAGGTTACTGGACAAAAGCAGAAAAACCTGTTACA...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGTCCTACAGTGCCGGGTaGAGGGTACCCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLSYSAG*RVPSRR
Trigger: CCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGA...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGTCGGAGACTCGTCCCTaGGGACCGTGGACGGCAGGT +
Preference number: 4 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLSETRP*GPWTAG
Trigger: ACCTGCCGTCCACGGTCCGCAGGGACGAGTCTCCGA...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp GTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACAACTGGTTATTGTTGTaGTACAGGCCCAAGCACGAG +
Preference number: 4 (lower is better)
Translates to: VVSASLEKAPHALMFTAYNWLLL*YRPKHE
Trigger: CTCGTGCTTGGGCCTGTACCACAACAATAACCAGTT...GTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp AAAGATGGCGTTACCGTTGGCGGGAAGGTAGGTGAAACGCTGGTACTGGCTTCGTCCACCTCCACATCGTaGAAAAACTGGTTATTGTTG +
Preference number: 4 (lower is better)
Translates to: KDGVTVGGKVGETLVLASSTSTS*KNWLLL
Trigger: CAACAATAACCAGTTTTTCCACGATGTGGAGGTGGA...CGAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCAACGGTAACGCCATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCAGCTGGTGTACTGGGTaGTGTTGCCCAACCACGAGT +
Preference number: 4 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTSWCTG*CCPTTS
Trigger: ACTCGTGGTTGGGCAACACCACCCAGTACACCAGCT...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATTGCCACGATGGCCGAGCTaGTGTACTGGGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: AQFYDALMVWLNKALPVLPRWPS*CTGWCC
Trigger: GCAACACCACCCAGTACACCAGCTCGGCCATCGTGG...CAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGGGCACCGCCAGGTACTaGTCGCAGAAGCCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQGTARY*SQKPPF
Trigger: GAAGGGCGGCTTCTGCGACCAGTACCTGGCGGTGCC...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp AATGCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATCATACGGGCCTGAGTaGGACGGCAGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: NAQFYDALMVWLNKALPVSYGPE*DGSCQS
Trigger: GGACTGGCAGCTGCCGTCCCACTCAGGCCCGTATGA...TACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCGGATGGCCTCGTGGCTaGTGGTGGACACGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCGWPRG*WWTRSS
Trigger: GGAAGACCGTGTCCACCACCAGCCACGAGGCCATCC...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCGAGAGGATGGCCTCGTaGCTGGTGGTGGACACGGTC +
Preference number: 4 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCERMAS*LVVDTV
Trigger: GACCGTGTCCACCACCAGCCACGAGGCCATCCTCTC...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AAAGGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTGAGAGGATGGCCTCGTaGCTGGTGGTGGACACGGTC +
Preference number: 4 (lower is better)
Translates to: KGACKIAIPICLFTVSSFERMAS*LVVDTV
Trigger: GACCGTGTCCACCACCAGCCACGAGGCCATCCTCTC...AAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACCCAGGACTTTGGTGTTaGAGAGGATGGCCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHPGLWC*RGWPRG
Trigger: GCCACGAGGCCATCCTCTCCAACACCAAAGTCCTGG...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAAGCTGGGAGCATTCGATaGGGTTGGAGGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: GALIPKARVQVNRVSMNKAGSIR*GWRPPA
Trigger: TGCAGGTGGCCTCCAACCCCATCGAATGCTCCCAGC...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GCAGGAGTGTACGTGACAGCCCAGGAAACGTTCCAAATGTTGGAGACTCATACTGACATGGTGGCCATCTaGGGCTTTCTCCACGAAAAT +
Preference number: 4 (lower is better)
Translates to: AGVYVTAQETFQMLETHTDMVAI*GFLHEN
Trigger: ATTTTCGTGGAGAAAGCCCCAGATGGCCACCATGTC...AGTATGAGTCTCCAACATTTGGAACGTTTCCTGGGCTGTCACGTACACTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGCACCGGTCCACAGGTTaGAGCAGGCTCATAATCATC +
Preference number: 4 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRHRSTG*SRLIII
Trigger: GATGATTATGAGCCTGCTCCAACCTGTGGACCGGTG...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGCTCCAGGTGACACAGTaGTCTCCCTTCCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: EPIFAHINVQLLAFSQLELQVTQ*SPFLPA
Trigger: AGCAGGGAGGAAGGGAGACCACTGTGTCACCTGGAG...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCGATGCCCTGATGGTCTaGTTAAATAAGGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFDALMV*LNKALP
Trigger: TGGAAGTGCCTTATTTAACCAGACCATCAGGGCATC...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTAAACGTTCCAAATGTTaGAGACTCATACTAGAGTCC +
Preference number: 4 (lower is better)
Translates to: GALSPSATFCSVTSQPEPKRSKC*RLILES
Trigger: GGACTCTAGTATGAGTCTCCAACATTTGGAACGTTT...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGACAGGGAAGCCCTCCTaGGCGAGGACACGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQTGKPS*ARTRRL
Trigger: GAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGT...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCGTCAATCACAGCTCCTaGCTTTCTAGGGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGVNHSS*LSRVLL
Trigger: GAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGAC...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACAGGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTATAGCCATAGTGTTCTaGGGCGGCCGCGGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: TGLKAKFIPKGACKIAIPIAIVF*GGRGGA
Trigger: GGCGCCGCCGCGGCCGCCCCAGAACACTATGGCTAT...AGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592223.5
CDS-3UTR CCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGAGGTCGGCTCTTGGGTaGCAGGCGGGAGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLRSALG*QAGVEE
Trigger: CTCCTCCACTCCCGCCTGCCACCCAAGAGCCGACCT...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp ATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACAAGCCGGGGATGGCGTaGGGGACGCCTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: IAIPICLFTVSSFRVQMHKPGMA*GTPFSS
Trigger: AGAAGAGAAAGGCGTCCCCCACGCCATCCCCGGCTT...GTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp TGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAGAGGGGCTCACAGTCTaGTGCAGGTTGCGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: CKIAIPICLFTVSSFRVQEGLTV*CRLRSQ
Trigger: CTGCGACCGCAACCTGCACCAGACTGTGAGCCCCTC...TTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR CAA 72 bp TCCAGGTACAACTGGTCCAACTCTTCAGGCTCTCGCTaGACCGTTACAGGAATAGGGGCCAAATTAGGACTA +
Preference number: 4 (lower is better)
Translates to: SRYNWSNSSGSR*TVTGIGAKLGL
Trigger: TAGTCCTAATTTGGCCCCTATTCCTGTAACGGTCAAGCGAGAGCCTGAAGAGTTGGACCAGTTGTACCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR TCA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGGTGTTCTTCCTCCGCTaGCTTCATGGTGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQVFFLR*LHGAAG
Trigger: GCCGGCGGCACCATGAAGTCAGCGGAGGAAGAACAC...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253506.9
ENST00000427363.7
CDS-3UTR TCA 90 bp TGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAACGTCCGCCGTCCCAATaGAAAGCTGCAGCATCAGCG +
Preference number: 4 (lower is better)
Translates to: CKIAIPICLFTVSSFRVQRPPSQ*KAAASA
Trigger: CGCTGATGCTGCAGCTTTTCATTGGGACGGCGGACG...TTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCTGCAGACGTAGAAACTaGCGTGAACGGGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTCRRRN*RERGWL
Trigger: TAACCAGCCCCGTTCACGTCAGTTTCTACGTCTGCA...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACCACCAGAGAATTCGGCTTGCACAGGTCCCGGTCAGTTTTCGCTTCCATCTCCGAGTGGTACCAGGTGTaGGTTCAGTTTATTTATTCA +
Preference number: 4 (lower is better)
Translates to: TTREFGLHRSRSVFASISEWYQV*VQFIYS
Trigger: TGAATAAATAAACTGAACTCACACCTGGTACCACTC...GGAGATGGAAGCGAAAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR TCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGAGGCACTTCCAGTATTaGACCCCAGGGGTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: EPIFAHINVQLLAFSQLERHFQY*TPGVPE
Trigger: TTCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCT...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp ACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGGTAAAACCTCACAATaGAATGTGTTTGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: TFCSVTSQPEPPPAGAIQGKTSQ*NVFAVS
Trigger: AGAAACTGCAAACACATTTCATTGTGAGGTTTTACC...CTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGGTGGTAAGGCTTCTGTaGAACAATCATCTTATAACT +
Preference number: 4 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQVVRLL*NNHLIT
Trigger: AGTTATAAGATGATTGTTTCACAGAAGCCTTACCAC...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCGAGAAAGGCTGCACGTaGCTCCTACAGTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCEKGCT*LLQCRV
Trigger: CACCCGGCACTGTAGGAGTCACGTGCAGCCTTTCTC...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGTCCCAATGAAAAGCTaGAGCATCAGCGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: FQGIDGSVSLTGHHTVKCVPMKS*SISGSF
Trigger: GAATGAGCCGCTGATGCTGCAGCTTTTCATTGGGAC...ACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCGGATAGCTGTCCGTaGTCTGCTTCTCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: GALIPKARVQVNRVSMNKPDSCP*SASPPE
Trigger: CTCTGGTGGAGAAGCAGAGCACGGACAGCTATCCGG...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATTGCCGGATAGCTGTCCGTaGTCTGCTTCTCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: AQFYDALMVWLNKALPVLPDSCP*SASPPE
Trigger: CTCTGGTGGAGAAGCAGAGCACGGACAGCTATCCGG...CAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGGGCGTGGGGTCAAACTaGGTGTGGGCCGTTCCCATG +
Preference number: 4 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQGVGSN*VWAVPM
Trigger: CATGGGAACGGCCCACACGCAGTTTGACCCCACGCC...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTGTAACAGGTTTTTCTaGTTTTGTCCAGTAACCTAT +
Preference number: 4 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPCNRFF*FCPVTY
Trigger: ATAGGTTACTGGACAAAAGCAGAAAAACCTGTTACA...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTAAGATATGTACACACATaGAAATGCAGGCTATCCTGT +
Preference number: 4 (lower is better)
Translates to: VIADREALLGEDTSALLLRYVHT*KCRLSC
Trigger: ACAGGATAGCCTGCATTTGCATGTGTGTACATATCT...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCAGGTTCCAAAACGGATaGCGGTTATTGCTGACAGGG +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGRFQNG*RLLLTG
Trigger: CCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCT...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AATGCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTACAAGAGACGCGATTGTaGCGGAGCGCACGGTACAGG +
Preference number: 4 (lower is better)
Translates to: NAQFYDALMVWLNKALPVQETRL*RSARYR
Trigger: CCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG...TACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCTGACGTTGGAGGATaGATAGCCATAGTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: FQGIDGSVSLTGHHTVKCADVGG*IAIVFW
Trigger: CCAGAACACTATGGCTATGCATCCTCCAACGTCAGC...ACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592223.5
CDS-3UTR GCA 90 bp TTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTCGGCGACGTCGTTTCTaGGTCTTTAGAAAAAGCACC +
Preference number: 4 (lower is better)
Translates to: FQGIDGSVSLTGHHTVKCRRRRF*VFRKST
Trigger: GGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCG...ACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp GGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGTGCAACACGCCACGCTaGTTTACGGCGACGTCGTTT +
Preference number: 4 (lower is better)
Translates to: GACKIAIPICLFTVSSFRCNTPR*FTATSF
Trigger: AAACGACGTCGCCGTAAAGCAGCGTGGCGTGTTGCA...CCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp AAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTAAAACTTGGAAGGGACTaGAAAGCTGGTGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: KKHPTRSCSRLTVRKMALKLGRD*KAGAWH
Trigger: ATGCCAAGCACCAGCTTTCCAGTCCCTTCCAAGTTT...TAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp ACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTACCGTTGGACATCGTGGAAAAACTaGTTATTGTTGTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: TPRAHVHGLRLERWRYRWTSWKN*LLLWYR
Trigger: CCTGTACCACAACAATAACCAGTTTTTCCACGATGT...CCAACGGTAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGTCCACCTCCACATCGTaGAAAAACTGGTTATTGTTG +
Preference number: 4 (lower is better)
Translates to: PTATVNHSSWLSRVLLELSTSTS*KNWLLL
Trigger: CAACAATAACCAGTTTTTCCACGATGTGGAGGTGGA...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp ACAGGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTTGGGCAGACTCAGCGTaGCCGTGGAGGGGGACCGTT +
Preference number: 4 (lower is better)
Translates to: TGLKAKFIPKGACKIAIPWADSA*PWRGTV
Trigger: AACGGTCCCCCTCCACGGCCACGCTGAGTCTGCCCA...AGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGTCATACGGGCCTGAGTaGGACGGCAGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLSYGPE*DGSCQS
Trigger: GGACTGGCAGCTGCCGTCCCACTCAGGCCCGTATGA...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp AAAGGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTTGGTGTTGGAGAGGATaGCCTCGTGGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KGACKIAIPICLFTVSSFWCWRG*PRGWWW
Trigger: CCACCACCAGCCACGAGGCCATCCTCTCCAACACCA...AAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAAGGCTGGCAACGCCCTTaGTGTAGGCAGCGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDEGWQRP*CRQREK
Trigger: TTTCTCCCGCTGCCTACACCAAGGGCGTTGCCAGCC...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTAAGTGGGTGCTCGTGCTaGAGAGGTCATTTCGTATTA +
Preference number: 4 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLSGCSC*RGHFVL
Trigger: TAATACGAAATGACCTCTCCAGCACGAGCACCCACT...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
ENST00000590313.5
CDS-3UTR CCA 90 bp TCCAGGTACAACTGGTCCAACTCTTCAGGCTCTCGCTTGACCGTTACAGGAATAAGTGGGTGCTCGTGCTaGAGAGGTCATTTCGTATTA +
Preference number: 4 (lower is better)
Translates to: SRYNWSNSSGSRLTVTGISGCSC*RGHFVL
Trigger: TAATACGAAATGACCTCTCCAGCACGAGCACCCACT...TATTCCTGTAACGGTCAAGCGAGAGCCTGAAGAGTTGGACCAGTTGTACCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGGGGGCAGCTACTGCTTaGAGGCGCACTCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLGAATA*RRTHLL
Trigger: CAGCAGGTGAGTGCGCCTCCAAGCAGTAGCTGCCCC...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp TGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAATGCTCAAACCCACGGTaGGGACTGCCGCATGCTGAG +
Preference number: 4 (lower is better)
Translates to: CKIAIPICLFTVSSFRVQCSNPR*GLPHAE
Trigger: CTCAGCATGCGGCAGTCCCCACCGTGGGTTTGAGCA...TTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp AAAGGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTATCGAGGCAGGAGTGTaGCTGGTAGGACAGGACGGC +
Preference number: 4 (lower is better)
Translates to: KGACKIAIPICLFTVSSFIEAGV*LVGQDG
Trigger: GCCGTCCTGTCCTACCAGCCACACTCCTGCCTCGAT...AAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR TCA 90 bp ACAGGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTGTGTTCTTCCTCCGCTaGCTTCATGGTGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: TGLKAKFIPKGACKIAIPVFFLR*LHGAAG
Trigger: GCCGGCGGCACCATGAAGTCAGCGGAGGAAGAACAC...AGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR TCA 90 bp ACAGGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTGCGGCTGCCGGCCGTTaGGGCTGTACTTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: TGLKAKFIPKGACKIAIPAAAGR*GCTSSC
Trigger: ACAAGAGGAAGTACAGCCTCAACGGCCGGCAGCCGC...AGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGTGGTCTTGCGGGACTTaGCAGGGACGCCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQWSCGT*QGRHLP
Trigger: TGGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCA...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAAAGGCACTTCCAGTATTaGACCCCAGGGGTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: GALIPKARVQVNRVSMNKRHFQY*TPGVPE
Trigger: TTCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCT...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TTATACATTCGCAAGAAGCAAAATAACCGTGACTATCTGAGTATGCAACCCCCGATAACCGTGACTATCTaGGTATGCAACCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: LYIRKKQNNRDYLSMQPPITVTI*VCNPRP
Trigger: GGGGCGGGGGTTGCATACTCAGATAGTCACGGTTAT...CGGGGGTTGCATACTCAGATAGTCACGGTTATTTTGCTTCTTGCGAATGTATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp TTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCTGACGTTGGAGGATaGATAGCCATAGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FQGIDGSVSLTGHHTVKCADVGG*IAIVFF
Trigger: GAAGAACACTATGGCTATGCATCCTCCAACGTCAGC...ACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAATGTACTTCCTCTTGTTaGAAGGGGACGCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GALIPKARVQVNRVSMNKCTSSC*KGTRVW
Trigger: CCAGACCCGCGTCCCCTTGCAACAAGAGGAAGTACA...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR GCA 90 bp ATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACTGGTGGGACTTGGGCTaGACCTCAATCCGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: IAIPICLFTVSSFRVQMHWWDLG*TSIRSS
Trigger: TGAGCTTCGGATTGAGGTGCAGCCCAAGTCCCACCA...GTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGATGACCTTGGAGTCCTaGAGGAAGTTGTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: EPIFAHINVQLLAFSQLEMTLES*RKLWPD
Trigger: GTCTGGCCACAACTTCCTGCAGGACTCCAAGGTCAT...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR GCA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCTATTATTTCATTTACTaGTGTGGCAGCAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGYYFIY*CGSRAG
Trigger: CCCGGCCCTGCTGCCACAGCAGTAAATGAAATAATA...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
CDS-3UTR GCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGTATTCAAGTTACTTGTaGTATGTTCGAAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLYSSYL*YVRSQI
Trigger: AATCTGGCTTCGAACATAGCACAAGTAACTTGAATA...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGAGTAACCTATTGATGTaGTATTCAAGTTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLSNLLM*YSSYLC
Trigger: GCACAAGTAACTTGAATAGCACATCAATAGGTTACT...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACAAGATATGTACACACATaGAAATGCAGGCTATCCTGT +
Preference number: 4 (lower is better)
Translates to: YVQTDGMAFRLFLSVSETRYVHT*KCRLSC
Trigger: ACAGGATAGCCTGCATTTGCATGTGTGTACATATCT...TGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp ATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACGCTTTAGGGTGCAAATaGACACCAGGACCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: IAIPICLFTVSSFRVQMHALGCK*TPGPPQ
Trigger: CTGAGGGGGTCCTGGTGTGCATTTGCACCCTAAAGC...GTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGAAGGGACTGGAAAGCTaGTGCTTGGCATCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQKGLES*CLASAR
Trigger: CCGCGCGGATGCCAAGCACCAGCTTTCCAGTCCCTT...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGACATCGTGGAAAAACTaGTTATTGTTGTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: PTATVNHSSWLSRVLLELTSWKN*LLLWYR
Trigger: CCTGTACCACAACAATAACCAGTTTTTCCACGATGT...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp ACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTCGTTTCTGCGTCACATCGTGGAAAAACTaGTTATTGTTGTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: TVKCATRHAALRRRRFCVTSWKN*LLLWYR
Trigger: CCTGTACCACAACAATAACCAGTTTTTCCACGATGT...GACGCAGAAACGACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp TTATTTAACAACCACACTGACAGTGGCCTCGAGGTAGGCCCAGCGTCAACACTGTCCACCTCCACATCGTaGAAAAACTGGTTATTGTTG +
Preference number: 4 (lower is better)
Translates to: LFNNHTDSGLEVGPASTLSTSTS*KNWLLL
Trigger: CAACAATAACCAGTTTTTCCACGATGTGGAGGTGGA...CAGTGTTGACGCTGGGCCTACCTCGAGGCCACTGTCAGTGTGGTTGTTAAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp TTATACATTCGCAAGAAGCAAAATAACCGTGACTATCTGAGTATGCAACCCCCGAGCTGGTGTACTGGGTaGTGTTGCCCAACCACGAGT +
Preference number: 4 (lower is better)
Translates to: LYIRKKQNNRDYLSMQPPSWCTG*CCPTTS
Trigger: ACTCGTGGTTGGGCAACACCACCCAGTACACCAGCT...CGGGGGTTGCATACTCAGATAGTCACGGTTATTTTGCTTCTTGCGAATGTATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGGCCGAGCTGGTGTACTaGGTGGTGTTGCCCAACCAC +
Preference number: 4 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLAELVY*VVLPNH
Trigger: GTGGTTGGGCAACACCACCCAGTACACCAGCTCGGC...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACTTCTGTTTTTATAATTaGAACGTTGGCGGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: FLSVSETQETRLCRSARYFCFYN*NVGGKV
Trigger: TACCTTCCCGCCAACGTTCCAATTATAAAAACAGAA...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCTTTCATTTACTGCTGTaGCAGCAGGGCCGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCFHLLL*QQGRGW
Trigger: CCACCCCCGGCCCTGCTGCCACAGCAGTAAATGAAA...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
CDS-3UTR CCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCTTTCCTTCTTGTTaGAGAGCCAATCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: GMAFRLFLSVSETQETRLCFPSC*RANLCT
Trigger: TGTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCA...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCAAACGTTCCAAATGTTaGAGACTCATACTAGAGTCC +
Preference number: 4 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFKRSKC*RLILES
Trigger: GGACTCTAGTATGAGTCTCCAACATTTGGAACGTTT...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTTTACGGTTAGAAAGATaGCGTTACCGTTGGCGGGAA +
Preference number: 4 (lower is better)
Translates to: FQGIDGSVSLTGHHTVKCLRLER*RYRWRE
Trigger: TTCCCGCCAACGGTAACGCCATCTTTCTAACCGTAA...ACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTATTGCCCAGCGTCAACACTaGGGATCTCGCCCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: GLKAKFIPKGACKIAIPIAQRQH*GSRPAA
Trigger: TGCCGCAGGGCGAGATCCCCAGTGTTGACGCTGGGC...AATAGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR TCA 90 bp AAAGGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGAAGCCGCCCTTCCTaGTGTGCTGGAAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: KGACKIAIPICLFTVSSFRSRPS*CAGKRS
Trigger: ACTCCTCTTTCCAGCACATCAGGAAGGGCGGCTTCT...AAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp GCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAATGTCGGAGTTTCTaGGTTTCAGGATTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: ACKIAIPICLFTVSSFRVQCRSF*VSGFRH
Trigger: GTGCCGGAATCCTGAAACTCAGAAACTCCGACATTG...CACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACCTTTCTCCACGAAAATaGCCTTGGAGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHLSPRK*PWSPAG
Trigger: TCCTGCAGGACTCCAAGGTCATTTTCGTGGAGAAAG...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAAAGGCACTTCCAGTATTaGACCCCAGGGGTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDERHFQY*TPGVPE
Trigger: TTCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCT...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGCCTCCTCGAACTGCGTaGGACGAGAAAATGCACGGC +
Preference number: 4 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLPPRTA*DEKMHG
Trigger: GCCGTGCATTTTCTCGTCTCACGCAGTTCGAGGAGG...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACCACACAACGCAGGGCTaGGCATTAAAGTGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHHTTQG*ALKWRF
Trigger: AAAACGCCACTTTAATGCTCAGCCCTGCGTTGTGTG...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATAACTACAAAGACAGCTaGCACAGACATCAAACGTTT +
Preference number: 4 (lower is better)
Translates to: DREALLGEDTSALLLFIHNYKDS*HRHQTF
Trigger: AAACGTTTGATGTCTGTGTCAGCTGTCTTTGTAGTT...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAACGAGGTTATCTCGATaGGAGGACTCTCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: CKIAIPICLFTVSSFRVQTRLSR*EDSPGQ
Trigger: CTGCCCTGGAGAGTCCTCGCATCGAGATAACCTCGT...TTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp AAAGGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTTGTACTTCCTCTTGTTaGAAGGGGACGCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KGACKIAIPICLFTVSSFCTSSC*KGTRVW
Trigger: CCAGACCCGCGTCCCCTTGCAACAAGAGGAAGTACA...AAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAATGGTGGGACTTGGGCTaGACCTCAATCCGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDEWWDLG*TSIRSS
Trigger: TGAGCTTCGGATTGAGGTGCAGCCCAAGTCCCACCA...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGACAAAGATGCGAGCATaGGACTATGAACAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRTKMRA*DYEQAY
Trigger: GTAGGCTTGTTCATAGTCGCATGCTCGCATCTTTGT...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGGTCTTCACGGTTACGTaGAGACCGACGGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLVFTVT*RPTGWP
Trigger: AGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGAC...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp ATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAACACGCAGGGATCAAGGAAAATaGATCCGAAGCTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: IDGSVSLTGHHTVKCATRRDQGK*IRSFPF
Trigger: AAAAGGGAAGCTTCGGATGCATTTTCCTTGATCCCT...GCGTGTTGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp CAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAATAGCTATACCTATTTaGCTTTTCACCGTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: QGIDGSVSLTGHHTVKCAIAIPI*LFTVSS
Trigger: GCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTAT...TGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp CCCTTTTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATATAGCTATACCTATTTaGCTTTTCACCGTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PFSFPFQGIDGSVSLTGHIAIPI*LFTVSS
Trigger: GCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTAT...ATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp ATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACCCTCTGATTCCGAAATaGCGGGATCTCAACCACCAG +
Preference number: 4 (lower is better)
Translates to: IAIPICLFTVSSFRVQMHPLIPK*RDLNHQ
Trigger: CTGGTGGTTGAGATCCCGCCATTTCGGAATCAGAGG...GTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp ATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACGTGAAACGCTGGTACTaGCTTCGCTTTCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: IAIPICLFTVSSFRVQMHVKRWY*LRFLFP
Trigger: CGGGAAGAGAAAGCGAAGCCAGTACCAGCGTTTCAC...GTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGTTCTGTTTTTATAATTaGAACGTTGGCGGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: PTATVNHSSWLSRVLLELFCFYN*NVGGKV
Trigger: TACCTTCCCGCCAACGTTCCAATTATAAAAACAGAA...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCTTCTGTTTTTATAATTaGAACGTTGGCGGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFFCFYN*NVGGKV
Trigger: TACCTTCCCGCCAACGTTCCAATTATAAAAACAGAA...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGGGGTCAAACTGCGTGTaGGCCGTTCCCATGAAAGGC +
Preference number: 4 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQGSNCV*AVPMKG
Trigger: GCCTTTCATGGGAACGGCCCACACGCAGTTTGACCC...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACGGCTTCCTTAGGATCTaGTCTATTACAAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: FLSFSGHRWLGLTNGTSHGFLRI*SITNAV
Trigger: AACAGCATTTGTAATAGACCAGATCCTAAGGAAGCC...GTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591814.5
3UTR CAA 72 bp GCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTaGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: AHINVQLLAFSQ*EVLSGTRCEFS
Trigger: ACTGAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR TCA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGGGGCTGGTTATCCTCTaGTTCCGAAATGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQGLVIL*FRNGGI
Trigger: GATCCCGCCATTTCGGAATCAGAGGATAACCAGCCC...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCTGCAGACGTAGAAACTaGCGTGAACGGGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCCRRRN*RERGWL
Trigger: TAACCAGCCCCGTTCACGTCAGTTTCTACGTCTGCA...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAATCCCTTCTGTTGTCATaGGATGACTTCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GALIPKARVQVNRVSMNKSLLLS*DDFSSR
Trigger: CCTGGAGGAGAAGTCATCTCATGACAACAGAAGGGA...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTAATGTTACAAAAGAGCTaGGATGACAGACTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLMLQKS*DDRLED
Trigger: ATCTTCCAGTCTGTCATCTCAGCTCTTTTGTAACAT...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
CDS-3UTR TCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGTCCAGTAACCTATTaGTGTGCTATTCAAGTTACT +
Preference number: 4 (lower is better)
Translates to: GMAFRLFLSVSETQETRLCPVTY*CAIQVT
Trigger: AGTAACTTGAATAGCACATCAATAGGTTACTGGACA...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTCAACCGTGTTTCAATaGATAAACCATGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: GMAFRLFLSVSETQETRLSTVFQ*INHAFW
Trigger: CCAAAAAGCATGGTTTATTCATTGAAACACGGTTGA...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGACGTTTCCTTTTCAATaGCAGTCCCCTGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: EPIFAHINVQLLAFSQLETFPFQ*QSPEKG
Trigger: GCCTTTCTCAGGGGACTGTCATTGAAAAGGAAACGT...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTAAACTACAAAGACAGCTaGCACAGACATCAAACGTTT +
Preference number: 4 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLNYKDS*HRHQTF
Trigger: AAACGTTTGATGTCTGTGTCAGCTGTCTTTGTAGTT...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
CDS-3UTR GCA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAAGTCCCAATGAAAAGCTaGAGCATCAGCGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: GALIPKARVQVNRVSMNKVPMKS*SISGSF
Trigger: GAATGAGCCGCTGATGCTGCAGCTTTTCATTGGGAC...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAAAGGAGTGGGTGCTCGTaGTGGAGAGGTCATTTCGTA +
Preference number: 4 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDERSGCS*WRGHFV
Trigger: TACGAAATGACCTCTCCAGCACGAGCACCCACTCCT...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGAGTAACCTATTGATGTaGTATTCAAGTTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: PTATVNHSSWLSRVLLELSNLLM*YSSYLC
Trigger: GCACAAGTAACTTGAATAGCACATCAATAGGTTACT...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AATGCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTAGGGTCCTCCTCGAACTaGGTGAGACGAGAAAATGCA +
Preference number: 4 (lower is better)
Translates to: NAQFYDALMVWLNKALPVGSSSN*VRRENA
Trigger: TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCC...TACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp ACGGGACATCACACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTATTCCTAAAGGTGCCTaGAAAATAGCTATACCTATT +
Preference number: 4 (lower is better)
Translates to: TGHHTVKCATRHAALRRRIPKGA*KIAIPI
Trigger: AATAGGTATAGCTATTTTGCAGGCACCTTTAGGAAT...ACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGTGTGATGTCCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGAACTGGTTATTGTTGTaGTACAGGCCCAAGCACGAG +
Preference number: 4 (lower is better)
Translates to: GACKIAIPICLFTVSSFRNWLLL*YRPKHE
Trigger: CTCGTGCTTGGGCCTGTACCACAACAATAACCAGTT...CCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTCCACCTCCACATCGTaGAAAAACTGGTTATTGTTG +
Preference number: 4 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRSTSTS*KNWLLL
Trigger: CAACAATAACCAGTTTTTCCACGATGTGGAGGTGGA...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp AATGCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTAGGATCTCCAGGACTTTaGTGTTGGAGAGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: NAQFYDALMVWLNKALPVGSPGL*CWRGWP
Trigger: AGGCCATCCTCTCCAACACCAAAGTCCTGGAGATCC...TACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCCACCGGTCCACAGGTTaGAGCAGGCTCATAATCATC +
Preference number: 4 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCHRSTG*SRLIII
Trigger: GATGATTATGAGCCTGCTCCAACCTGTGGACCGGTG...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAATTTTCAGGGCATCGATaGCTCGGTCTCACTAACGGG +
Preference number: 4 (lower is better)
Translates to: CKIAIPICLFTVSSFRVQFSGHR*LGLTNG
Trigger: CCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAA...TTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
3UTR CAA 72 bp TCCTCCCTGCTTTCCTTCTTGTTGGAGAGCCAATCTTaGCACATATTAATGTTCAGCTCCTGGCATTCAGTC +
Preference number: 4 (lower is better)
Translates to: SSLLSFLLESQS*HILMFSSWHSV
Trigger: GACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCAGGGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CGTATTATTTCATTTACGTCATCCAGGTACAACTGGTCCAACTCTTCAGGCTCTAAAGTCTTTGTCTGCTaGAGTCAGCATACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RIISFTSSRYNWSNSSGSKVFVC*SQHTPA
Trigger: AGCAGGGGTATGCTGACTTCAGCAGACAAAGACTTT...AGAGCCTGAAGAGTTGGACCAGTTGTACCTGGATGACGTAAATGAAATAATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR TCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTAGTGGTAAGGCTTCTGTaGAACAATCATCTTATAACT +
Preference number: 4 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLVVRLL*NNHLIT
Trigger: AGTTATAAGATGATTGTTTCACAGAAGCCTTACCAC...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
CDS-3UTR TCA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGAACTACAAAGACAGCTaGCACAGACATCAAACGTTT +
Preference number: 4 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRNYKDS*HRHQTF
Trigger: AAACGTTTGATGTCTGTGTCAGCTGTCTTTGTAGTT...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp ACAGGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTTGTACTTCCTCTTGTTaGAAGGGGACGCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TGLKAKFIPKGACKIAIPCTSSC*KGTRVW
Trigger: CCAGACCCGCGTCCCCTTGCAACAAGAGGAAGTACA...AGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCGTCCCAATGAAAAGCTaGAGCATCAGCGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCVPMKS*SISGSF
Trigger: GAATGAGCCGCTGATGCTGCAGCTTTTCATTGGGAC...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGATGACCTTGGAGTCCTaGAGGAAGTTGTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLMTLES*RKLWPD
Trigger: GTCTGGCCACAACTTCCTGCAGGACTCCAAGGTCAT...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR GCA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTATTCAAGTTACTTGTaGTATGTTCGAAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: GMAFRLFLSVSETQETRLYSSYL*YVRSQI
Trigger: AATCTGGCTTCGAACATAGCACAAGTAACTTGAATA...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATTATTCAAGTTACTTGTaGTATGTTCGAAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: DREALLGEDTSALLLFIHYSSYL*YVRSQI
Trigger: AATCTGGCTTCGAACATAGCACAAGTAACTTGAATA...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGGGGTCCTCCTCGAACTaGGTGAGACGAGAAAATGCA +
Preference number: 4 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLGSSSN*VRRENA
Trigger: TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCC...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp TGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAACGGCGACGTCGTTTCTaGGTCTTTAGAAAAAGCACC +
Preference number: 4 (lower is better)
Translates to: CKIAIPICLFTVSSFRVQRRRRF*VFRKST
Trigger: GGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCG...TTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGGGATCTCCAGGACTTTaGTGTTGGAGAGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLGSPGL*CWRGWP
Trigger: AGGCCATCCTCTCCAACACCAAAGTCCTGGAGATCC...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp TGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAGACATGGTGGCCATCTaGGGCTTTCTCCACGAAAAT +
Preference number: 4 (lower is better)
Translates to: CKIAIPICLFTVSSFRVQDMVAI*GFLHEN
Trigger: ATTTTCGTGGAGAAAGCCCCAGATGGCCACCATGTC...TTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGTTAATGTTCAGCTCCTaGCATTCAGTCAGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: EPIFAHINVQLLAFSQLELMFSS*HSVSWR
Trigger: CCTCCAACTGACTGAATGCCAGGAGCTGAACATTAA...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CCA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGAAACGTTCCAAATGTTaGAGACTCATACTAGAGTCC +
Preference number: 4 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRKRSKC*RLILES
Trigger: GGACTCTAGTATGAGTCTCCAACATTTGGAACGTTT...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAATGCAGACCGACGGGATaGCCTTCAGGTTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDECRPTG*PSGCFF
Trigger: AAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCA...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTATTGCGCCCTCGTCGCGCTaGTTAAACTCGAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: GLKAKFIPKGACKIAIPIAPSSR*LNSKRN
Trigger: GTTCCTCTTCGAGTTTAACCAGCGCGACGAGGGCGC...AATAGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592223.5
CDS-3UTR CCA 90 bp GCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGGCCATGTTTTCCCCTTaGCTGTTATACATTCGCAAG +
Preference number: 4 (lower is better)
Translates to: ACKIAIPICLFTVSSFRVAMFSP*LLYIRK
Trigger: CTTGCGAATGTATAACAGCCAAGGGGAAAACATGGC...CACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp AATGCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTAACGTTTCCTTTTCAATaGCAGTCCCCTGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: NAQFYDALMVWLNKALPVTFPFQ*QSPEKG
Trigger: GCCTTTCTCAGGGGACTGTCATTGAAAAGGAAACGT...TACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTATTCGTGGTCCCAGGAGATaGAGTTACCCCTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: GLKAKFIPKGACKIAIPIRGPRR*SYPWRS
Trigger: ACTTCTCCAGGGGTAACTTCATCTCCTGGGACCACG...AATAGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR GCA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTATATTCAAGTTACTTGTaGTATGTTCGAAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLYSSYL*YVRSQI
Trigger: AATCTGGCTTCGAACATAGCACAAGTAACTTGAATA...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
CDS-3UTR GCA 90 bp GCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATTGACTAATTGTACAGAGTaGCCAGCAAGGCCTACACAA +
Preference number: 4 (lower is better)
Translates to: AQFYDALMVWLNKALPVLTNCTE*PARPTQ
Trigger: TTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGT...CAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp GGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTATTGCTTTAGGGTGCAAATaGACACCAGGACCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLKAKFIPKGACKIAIPIALGCK*TPGPPQ
Trigger: CTGAGGGGGTCCTGGTGTGCATTTGCACCCTAAAGC...AATAGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR GCA 90 bp ATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAACACGCATTCCTAAAGGTGCCTaGAAAATAGCTATACCTATT +
Preference number: 4 (lower is better)
Translates to: IDGSVSLTGHHTVKCATRIPKGA*KIAIPI
Trigger: AATAGGTATAGCTATTTTGCAGGCACCTTTAGGAAT...GCGTGTTGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp ACAGGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTGGCCAAGTGGAAACTTaGAAGGGACTGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: TGLKAKFIPKGACKIAIPGQVET*KGLESW
Trigger: CCAGCTTTCCAGTCCCTTCCAAGTTTCCACTTGGCC...AGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CCA 90 bp ACAGGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTGGATCTCCAGGACTTTaGTGTTGGAGAGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: TGLKAKFIPKGACKIAIPGSPGL*CWRGWP
Trigger: AGGCCATCCTCTCCAACACCAAAGTCCTGGAGATCC...AGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGTGCTTTCCTTCTTGTTaGAGAGCCAATCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: EPIFAHINVQLLAFSQLECFPSC*RANLCT
Trigger: TGTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCA...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTATACATTCGCAAGAAGCAAAATAACCGTGACTATCTGAGTATGCAACCCCCGGCCATGTTTTCCCCTTaGCTGTTATACATTCGCAAG +
Preference number: 4 (lower is better)
Translates to: LYIRKKQNNRDYLSMQPPAMFSP*LLYIRK
Trigger: CTTGCGAATGTATAACAGCCAAGGGGAAAACATGGC...CGGGGGTTGCATACTCAGATAGTCACGGTTATTTTGCTTCTTGCGAATGTATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGATGTTACAAAAGAGCTaGGATGACAGACTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: EPIFAHINVQLLAFSQLEMLQKS*DDRLED
Trigger: ATCTTCCAGTCTGTCATCTCAGCTCTTTTGTAACAT...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACAGATATGTACACACATaGAAATGCAGGCTATCCTGT +
Preference number: 4 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHRYVHT*KCRLSC
Trigger: ACAGGATAGCCTGCATTTGCATGTGTGTACATATCT...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AATGCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTAACTAATTGTACAGAGTaGCCAGCAAGGCCTACACAA +
Preference number: 4 (lower is better)
Translates to: NAQFYDALMVWLNKALPVTNCTE*PARPTQ
Trigger: TTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGT...TACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGAAACTTGGAAGGGACTaGAAAGCTGGTGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLKLGRD*KAGAWH
Trigger: ATGCCAAGCACCAGCTTTCCAGTCCCTTCCAAGTTT...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CCA 90 bp ATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACTCCACCTCCACATCGTaGAAAAACTGGTTATTGTTG +
Preference number: 4 (lower is better)
Translates to: IAIPICLFTVSSFRVQMHSTSTS*KNWLLL
Trigger: CAACAATAACCAGTTTTTCCACGATGTGGAGGTGGA...GTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp GCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATTGGAGTGGTACCAGGTGTaGGTTCAGTTTATTTATTCA +
Preference number: 4 (lower is better)
Translates to: AQFYDALMVWLNKALPVLEWYQV*VQFIYS
Trigger: TGAATAAATAAACTGAACTCACACCTGGTACCACTC...CAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACGTGGTAAGGCTTCTGTaGAACAATCATCTTATAACT +
Preference number: 4 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHVVRLL*NNHLIT
Trigger: AGTTATAAGATGATTGTTTCACAGAAGCCTTACCAC...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp ACAGGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTAACTGGTTATTGTTGTaGTACAGGCCCAAGCACGAG +
Preference number: 4 (lower is better)
Translates to: TGLKAKFIPKGACKIAIPNWLLL*YRPKHE
Trigger: CTCGTGCTTGGGCCTGTACCACAACAATAACCAGTT...AGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CCA 90 bp GCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATTGACATCGTGGAAAAACTaGTTATTGTTGTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: AQFYDALMVWLNKALPVLTSWKN*LLLWYR
Trigger: CCTGTACCACAACAATAACCAGTTTTTCCACGATGT...CAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR TCA 90 bp AATGCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTAATGTTACAAAAGAGCTaGGATGACAGACTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: NAQFYDALMVWLNKALPVMLQKS*DDRLED
Trigger: ATCTTCCAGTCTGTCATCTCAGCTCTTTTGTAACAT...TACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAAACATCGTGGAAAAACTaGTTATTGTTGTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDETSWKN*LLLWYR
Trigger: CCTGTACCACAACAATAACCAGTTTTTCCACGATGT...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGTGCTTTCCTTCTTGTTaGAGAGCCAATCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLCFPSC*RANLCT
Trigger: TGTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCA...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp AATGCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTAAAACGTTCCAAATGTTaGAGACTCATACTAGAGTCC +
Preference number: 4 (lower is better)
Translates to: NAQFYDALMVWLNKALPVKRSKC*RLILES
Trigger: GGACTCTAGTATGAGTCTCCAACATTTGGAACGTTT...TACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCAAACGTTCCAAATGTTaGAGACTCATACTAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCKRSKC*RLILES
Trigger: GGACTCTAGTATGAGTCTCCAACATTTGGAACGTTT...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTATTTTACGGTTAGAAAGATaGCGTTACCGTTGGCGGGAA +
Preference number: 4 (lower is better)
Translates to: GLKAKFIPKGACKIAIPILRLER*RYRWRE
Trigger: TTCCCGCCAACGGTAACGCCATCTTTCTAACCGTAA...AATAGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR TCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGGAGTGGTACCAGGTGTaGGTTCAGTTTATTTATTCA +
Preference number: 4 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLEWYQV*VQFIYS
Trigger: TGAATAAATAAACTGAACTCACACCTGGTACCACTC...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR TCA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAAGGTAAAACCTCACAATaGAATGTGTTTGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDEGKTSQ*NVFAVS
Trigger: AGAAACTGCAAACACATTTCATTGTGAGGTTTTACC...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCTCAACCGTGTTTCAATaGATAAACCATGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCSTVFQ*INHAFW
Trigger: CCAAAAAGCATGGTTTATTCATTGAAACACGGTTGA...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
3UTR CAA 72 bp CTTAGGTTGCATGTTATTTACAATCACTTTCTAATGTaGCCGTCTGGTAACCTACAGCTACTGTCAATCACA +
Preference number: 4 (lower is better)
Translates to: LRLHVIYNHFLM*PSGNLQLLSIT
Trigger: TGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR TCA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGTCAACCGTGTTTCAATaGATAAACCATGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLSTVFQ*INHAFW
Trigger: CCAAAAAGCATGGTTTATTCATTGAAACACGGTTGA...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAAAGTAACCTATTGATGTaGTATTCAAGTTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDESNLLM*YSSYLC
Trigger: GCACAAGTAACTTGAATAGCACATCAATAGGTTACT...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR GCA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGTGTAACAGGTTTTTCTaGTTTTGTCCAGTAACCTAT +
Preference number: 4 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQCNRFF*FCPVTY
Trigger: ATAGGTTACTGGACAAAAGCAGAAAAACCTGTTACA...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CCA 90 bp GGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTATTACATCGTGGAAAAACTaGTTATTGTTGTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: GLKAKFIPKGACKIAIPITSWKN*LLLWYR
Trigger: CCTGTACCACAACAATAACCAGTTTTTCCACGATGT...AATAGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
3UTR CAA 72 bp TTGTCCAGTAACCTATTGATGTGCTATTCAAGTTACTaGTGCTATGTTCGAAGCCAGATTAAAAACAAAGAT +
Preference number: 4 (lower is better)
Translates to: LSSNLLMCYSSY*CYVRSQIKNKD
Trigger: ATCTTTGTTTTTAATCTGGCTTCGAACATAGCACAAGTAACTTGAATAGCACATCAATAGGTTACTGGACAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GGCCCGGCAGTCGGAGACTCGTCCCTGCGGACCGTGGACGGCAGGTGCTGCGGGCAGGCAGGTCGGCTCTaGGGTGGCAGGCGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: GPAVGDSSLRTVDGRCCGQAGRL*GGRREW
Trigger: CCACTCCCGCCTGCCACCCAAGAGCCGACCTGCCTG...CCCGCAGCACCTGCCGTCCACGGTCCGCAGGGACGAGTCTCCGACTGCCGGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS GCA 90 bp TGCACCTCAATCCGAAGCTCATACGGGCCTGAGTGGGACGGCAGCTaGCAGTCCAGGGCGGGCAGGGTCGGGCTGGGGCGGCCGCGGCGG +
Preference number: 5 (lower is better)
Translates to: CTSIRSSYGPEWDGS*QSRAGRVGLGRPRR
Trigger: CCGCCGCGGCCGCCCCAGCCCGACCCTGCCCGCCCTGGACTGGCAGCTGCCGTCCCACTCAGGCCCGTATGAGCTTCGGATTGAGGTGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CAA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCCCGACGGGCTCCACCTaGAGCGCCACTGAGGGCGGC +
Preference number: 5 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAAPTGST*SATEGG
Trigger: GCCGCCCTCAGTGGCGCTCAAGGTGGAGCCCGTCGG...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS GCA 90 bp GTGGCCGGAGGAGAGGAAGTAGCCCGCGGGCCCACCGTCCAAAGCTaGTCCGTACCCCGAGGGGTGATCCGCCGGCGGGATGATGCCCGG +
Preference number: 5 (lower is better)
Translates to: VAGGEEVARGPTVQS*SVPRGVIRRRDDAR
Trigger: CCGGGCATCATCCCGCCGGCGGATCACCCCTCGGGGTACGGAGCAGCTTTGGACGGTGGGCCCGCGGGCTACTTCCTCTCCTCCGGCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGCGTGCGGCCGCTGGGTaGCGGGACGTGAACGCGGAA +
Preference number: 5 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTRAAAG*RDVNAE
Trigger: TTCCGCGTTCACGTCCCGCAACCCAGCGGCCGCACG...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS TCA 90 bp TGGTGTACTGGGTGGTGTTGCCCAACCACGAGTCGTCGGTCACGCTaGCCCGCGGGGAGCCGTGCGGGGACGGCGTGGGCGAGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: WCTGWCCPTTSRRSR*PAGSRAGTAWASGG
Trigger: CCCACCACTCGCCCACGCCGTCCCCGCACGGCTCCCCGCGGGTCAGCGTGACCGACGACTCGTGGTTGGGCAACACCACCCAGTACACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS GCA 90 bp TCCGGCTCAGGAGGGGCGGGCGAGGGGCCCGTTCACAGCCCAGACTaGGGCGGACACGCTCCGGCCGCCTCGTCTACCTGCTCGTTGTTT +
Preference number: 5 (lower is better)
Translates to: SGSGGAGEGPVHSPD*GGHAPAASSTCSLF
Trigger: AAACAACGAGCAGGTAGACGAGGCGGCCGGAGCGTGTCCGCCGCAGTCTGGGCTGTGAACGGGCCCCTCGCCCGCCCCTCCTGAGCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590861.1
CDS CCA 90 bp CGCAGGGCCAAGTGGAAACTTGGAAGGGACTGGAAAGCTGGTGCTTaGCATCCGCGCGGCGGCGGCGGGGAGTGGAGCGGCGGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: RRAKWKLGRDWKAGA*HPRGGGGEWSGGRR
Trigger: CCTCCGCCCGCCGCTCCACTCCCCGCCGCCGCCGCGCGGATGCCAAGCACCAGCTTTCCAGTCCCTTCCAAGTTTCCACTTGGCCCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
ENST00000587635.5
ENST00000591814.5
CDS-3UTR CAA 90 bp GGGGTGCGTGGCCACTGGCCTGGGCACGTCCTGGACGGCGGGGGCCTCTCCGGCGAGTCCTGCAGGAAGTaGTGGCCAGACAGGACCATC +
Preference number: 5 (lower is better)
Translates to: GVRGHWPGHVLDGGGLSGESCRK*WPDRTI
Trigger: GATGGTCCTGTCTGGCCACAACTTCCTGCAGGACTC...GCCGGAGAGGCCCCCGCCGTCCAGGACGTGCCCAGGCCAGTGGCCACGCACCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CAA 90 bp GGCCCAGCGTCAACACTGGGGATCTCGCCCTGCGGCAGCCTGGGGGCTCTGCCTGGCGGCTGCCGGCCGTaGAGGCTGTACTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: GPASTLGISPCGSLGALPGGCRP*RLYFLL
Trigger: CAAGAGGAAGTACAGCCTCAACGGCCGGCAGCCGCC...AGGCAGAGCCCCCAGGCTGCCGCAGGGCGAGATCCCCAGTGTTGACGCTGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS TCA 90 bp GAGCCAGTGCCTGGCTGCCTCGGCAGAGAGCTGGGGTCGCCAGAGTaGCCGCCCTCGTCCGTAGCACGGTACCAGCACGTCTCTGACGGC +
Preference number: 5 (lower is better)
Translates to: EPVPGCLGRELGSPE*PPSSVARYQHVSDG
Trigger: GCCGTCAGAGACGTGCTGGTACCGTGCTACGGACGAGGGCGGTCACTCTGGCGACCCCAGCTCTCTGCCGAGGCAGCCAGGCACTGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586695.1
CDS GCA 90 bp AGGTCCTCCCCGACGGGCTCCACCTTGAGCGCCACTGAGGGCGGCTaGTCCAGGGTGGTCTTGCGGGACTTGACAGGGACGCCATCTCCC +
Preference number: 5 (lower is better)
Translates to: RSSPTGSTLSATEGG*SRVVLRDLTGTPSP
Trigger: GGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCACCCTGGAGCAGCCGCCCTCAGTGGCGCTCAAGGTGGAGCCCGTCGGGGAGGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS CCA 90 bp CCCGAAGACCGCAGCCGCAGGGCCAAGTGGAAACTTGGAAGGGACTaGAAAGCTGGTGCTTGGCATCCGCGCGGCGGCGGCGGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: PEDRSRRAKWKLGRD*KAGAWHPRGGGGEW
Trigger: CCACTCCCCGCCGCCGCCGCGCGGATGCCAAGCACCAGCTTTCCAGTCCCTTCCAAGTTTCCACTTGGCCCTGCGGCTGCGGTCTTCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
ENST00000587635.5
ENST00000591814.5
CDS CCA 90 bp CGTAGGAGGAGGCCTCTGAGTTGCAGCTCCGGGAGGACAGGCTGCTaGCCGGGCTCAGGCACGAGGGGTCTCTGTAGGCCTCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: RRRRPLSCSSGRTGC*PGSGTRGLCRPPGW
Trigger: CCAGCCTGGAGGCCTACAGAGACCCCTCGTGCCTGAGCCCGGCCAGCAGCCTGTCCTCCCGGAGCTGCAACTCAGAGGCCTCCTCCTACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS CCA 90 bp TCCGTGCCACACCCCATAAGCCCCGTCCCGGTGACCGTGCACAGGTaGGTCCTGCTCCACCGACTGGGAACCGGTTCCCACCAGCGCCGA +
Preference number: 5 (lower is better)
Translates to: SVPHPISPVPVTVHR*VLLHRLGTGSHQRR
Trigger: TCGGCGCTGGTGGGAACCGGTTCCCAGTCGGTGGAGCAGGACCCACCTGTGCACGGTCACCGGGACGGGGCTTATGGGGTGTGGCACGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591089.1
CDS-3UTR CAA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTGGAAAGCTGGTGCTaGGCATCCGCGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: RDAIVPERTVQAVPSAGALESWC*ASARRR
Trigger: CCGCCGCCGCGCGGATGCCAAGCACCAGCTTTCCAG...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CAA 90 bp CGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCCCCAGACGCATCGGGGTCCGTGGTCTaGGGAGACACGCAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: RPRRRWTPARAATGAPDASGSVV*GDTQGD
Trigger: GTCTCCCTGCGTGTCTCCCAAGACCACGGACCCCGA...TGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCGTGCGGCCGCTGGGTaGCGGGACGTGAACGCGGAA +
Preference number: 5 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLERAAAG*RDVNAE
Trigger: TTCCGCGTTCACGTCCCGCAACCCAGCGGCCGCACG...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS TCA 90 bp ACGGCGTGGGCGAGTGGTGGGGTGAGTAGGGCGGCTGCCGGCCGTTaGGGCTGTACTTCCTCTTGTTGCAAGGGGACGCGGGTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: TAWASGGVSRAAAGR*GCTSSCCKGTRVWR
Trigger: CCTCCAGACCCGCGTCCCCTTGCAACAAGAGGAAGTACAGCCTCAACGGCCGGCAGCCGCCCTACTCACCCCACCACTCGCCCACGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS TCA 90 bp GCCAGAGTGACCGCCCTCGTCCGTAGCACGGTACCAGCACGTCTCTaGCGGCCAAAGTGCAGGTGCCAGGTGCCGGCCGCGATGCTGGGA +
Preference number: 5 (lower is better)
Translates to: ARVTALVRSTVPARL*RPKCRCQVPAAMLG
Trigger: TCCCAGCATCGCGGCCGGCACCTGGCACCTGCACTTTGGCCGTCAGAGACGTGCTGGTACCGTGCTACGGACGAGGGCGGTCACTCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586695.1
CDS GCA 90 bp ACTCGTAGGAGGAGGCCTCTGAGTTGCAGCTCCGGGAGGACAGGCTaGTGGCCGGGCTCAGGCACGAGGGGTCTCTGTAGGCCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: TRRRRPLSCSSGRTG*WPGSGTRGLCRPPG
Trigger: GCCTGGAGGCCTACAGAGACCCCTCGTGCCTGAGCCCGGCCAGCAGCCTGTCCTCCCGGAGCTGCAACTCAGAGGCCTCCTCCTACGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS CCA 90 bp TTATCTCGATGCGAGGACTCTCCAGGGCAGGGGCCCCATCAGGCCTaGTGTGGCCGGAGGAGAGGAAGTAGCCCGCGGGCCCACCGTCCA +
Preference number: 5 (lower is better)
Translates to: LSRCEDSPGQGPHQA*CGRRRGSSPRAHRP
Trigger: TGGACGGTGGGCCCGCGGGCTACTTCCTCTCCTCCGGCCACACCAGGCCTGATGGGGCCCCTGCCCTGGAGAGTCCTCGCATCGAGATAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp CGGCCGGCTGCGGGAGTCCGAGGTGACAGTGGCCCGGGCTGGCAACGCCCTTGGACCAGAGAATTCGGCTaGCACAGGTCCCGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: RPAAGVRGDSGPGWQRPWTREFG*HRSRSV
Trigger: AACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGT...CCAAGGGCGTTGCCAGCCCGGGCCACTGTCACCTCGGACTCCCGCAGCCGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CAA 90 bp GGCCCAGCGTCAACACTGGGGATCTCGCCCTGCGGCAGCCTGGGGGCTCTGCCTAGGCTGTACTTCCTCTaGTTGCAAGGGGACGCGGGT +
Preference number: 5 (lower is better)
Translates to: GPASTLGISPCGSLGALPRLYFL*LQGDAG
Trigger: ACCCGCGTCCCCTTGCAACAAGAGGAAGTACAGCCT...AGGCAGAGCCCCCAGGCTGCCGCAGGGCGAGATCCCCAGTGTTGACGCTGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CAA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCGGCGGCTGCCGGCCGTaGAGGCTGTACTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: RDAIVPERTVQAVPSAGAGGCRP*RLYFLL
Trigger: CAAGAGGAAGTACAGCCTCAACGGCCGGCAGCCGCC...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGGGCGGCTGCCGGCCGTaGAGGCTGTACTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLGGCRP*RLYFLL
Trigger: CAAGAGGAAGTACAGCCTCAACGGCCGGCAGCCGCC...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GGCCCAGCGTCAACACTGGGGATCTCGCCCTGCGGCAGCCTGGGGGCTCTGCCTGAGTCCTGCAGGAAGTaGTGGCCAGACAGGACCATC +
Preference number: 5 (lower is better)
Translates to: GPASTLGISPCGSLGALPESCRK*WPDRTI
Trigger: GATGGTCCTGTCTGGCCACAACTTCCTGCAGGACTC...AGGCAGAGCCCCCAGGCTGCCGCAGGGCGAGATCCCCAGTGTTGACGCTGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CAA 90 bp GGCCCGGCAGTCGGAGACTCGTCCCTGCGGACCGTGGACGGCAGGTGCTGCGGGCTGGCATTCAGTCAGTaGGAGGTTCTGAGTGGTACC +
Preference number: 5 (lower is better)
Translates to: GPAVGDSSLRTVDGRCCGLAFSQ*EVLSGT
Trigger: GGTACCACTCAGAACCTCCAACTGACTGAATGCCAG...CCCGCAGCACCTGCCGTCCACGGTCCGCAGGGACGAGTCTCCGACTGCCGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS TCA 90 bp GGTGCTGCGGCACCGCCAGGTACTGGTCGCAGAAGCCGCCCTTCCTaGTGTGCTGGAAAGAGGAGTAGTCTTCGGGCGCGAAGTCGGCCG +
Preference number: 5 (lower is better)
Translates to: GAAAPPGTGRRSRPS*CAGKRSSLRARSRP
Trigger: CGGCCGACTTCGCGCCCGAAGACTACTCCTCTTTCCAGCACATCAGGAAGGGCGGCTTCTGCGACCAGTACCTGGCGGTGCCGCAGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS GCA 90 bp TGCACCTCAATCCGAAGCTCATACGGGCCTGAGTGGGACGGCAGCTaGCAGTCCAGGGCGGGCAGGGTCGGGCTTCCTCCGCTGACTTCA +
Preference number: 5 (lower is better)
Translates to: CTSIRSSYGPEWDGS*QSRAGRVGLPPLTS
Trigger: TGAAGTCAGCGGAGGAAGCCCGACCCTGCCCGCCCTGGACTGGCAGCTGCCGTCCCACTCAGGCCCGTATGAGCTTCGGATTGAGGTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397790.6
CDS-3UTR CAA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCGTGGAGGGGGACCGTTaGGAGCTAGGGAGGACGTCT +
Preference number: 5 (lower is better)
Translates to: RDAIVPERTVQAVPSAGAVEGDR*ELGRTS
Trigger: AGACGTCCTCCCTAGCTCCAAACGGTCCCCCTCCAC...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp CCCAGGGGTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCAGGCTGTACTTCCTCTaGTTGCAAGGGGACGCGGGT +
Preference number: 5 (lower is better)
Translates to: PRGARRAGRGVKLRVGRSRLYFL*LQGDAG
Trigger: ACCCGCGTCCCCTTGCAACAAGAGGAAGTACAGCCT...GGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGTGTACTGGGTGGTGTaGCCCAACCACGAGTCGTCG +
Preference number: 5 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDVYWVV*PNHESS
Trigger: CGACGACTCGTGGTTGGGCAACACCACCCAGTACAC...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTCGGTGGTCAGCGCGTaGATGGCGGCCACGATGGCC +
Preference number: 5 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHSVVSA*MAATMA
Trigger: GGCCATCGTGGCCGCCATCAACGCGCTGACCACCGA...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGGTGGTCTTGCGGGACTaGACAGGGACGCCATCTCCC +
Preference number: 5 (lower is better)
Translates to: ENARPSEAAMDASKSSDWVVLRD*TGTPSP
Trigger: GGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCAC...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GATGAAGTTACCCCTGGAGAAGTGTCTCGGGGACGTCCGCCCAGCACAAAGCTCCCGACGGGCTCCACCTaGAGCGCCACTGAGGGCGGC +
Preference number: 5 (lower is better)
Translates to: DEVTPGEVSRGRPPSTKLPTGST*SATEGG
Trigger: GCCGCCCTCAGTGGCGCTCAAGGTGGAGCCCGTCGG...GAGCTTTGTGCTGGGCGGACGTCCCCGAGACACTTCTCCAGGGGTAACTTCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CAA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGGAGCATTCGATGGGGTaGGAGGCCACCTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: ENARPSEAAMDASKSSDWEHSMG*EATCRD
Trigger: GTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCTC...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAGCCCGAACGGATGCCGGTTATaGCTGACAGGGAAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: VGRSHERPLHGGSPVLSPNGCRL*LTGKPS
Trigger: GGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTT...CGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS GCA 90 bp CGGCCAAAGTGCAGGTGCCAGGTGCCGGCCGCGATGCTGGGAAGATaGTGTGGCTGTCTCTCCACGAACCAAGCGACCCACAGGTCCACA +
Preference number: 5 (lower is better)
Translates to: RPKCRCQVPAAMLGR*CGCLSTNQATHRST
Trigger: TGTGGACCTGTGGGTCGCTTGGTTCGTGGAGAGACAGCCACAGCATCTTCCCAGCATCGCGGCCGGCACCTGGCACCTGCACTTTGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586695.1
CDS GCA 90 bp CACGTCTCTGACGGCCAAAGTGCAGGTGCCAGGTGCCGGCCGCGATaGTGGGAAGATGCTGTGGCTGTCTCTCCACGAACCAAGCGACCC +
Preference number: 5 (lower is better)
Translates to: HVSDGQSAGARCRPR*WEDAVAVSPRTKRP
Trigger: GGGTCGCTTGGTTCGTGGAGAGACAGCCACAGCATCTTCCCAGCATCGCGGCCGGCACCTGGCACCTGCACTTTGGCCGTCAGAGACGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586695.1
CDS CCA 90 bp TTTCTCCTCTCCCGAAGACCGCAGCCGCAGGGCCAAGTGGAAACTTaGAAGGGACTGGAAAGCTGGTGCTTGGCATCCGCGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: FLLSRRPQPQGQVET*KGLESWCLASARRR
Trigger: CCGCCGCCGCGCGGATGCCAAGCACCAGCTTTCCAGTCCCTTCCAAGTTTCCACTTGGCCCTGCGGCTGCGGTCTTCGGGAGAGGAGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
ENST00000587635.5
ENST00000591814.5
CDS-3UTR CAA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACAGGCTGTACTTCCTCTaGTTGCAAGGGGACGCGGGT +
Preference number: 5 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDRLYFL*LQGDAG
Trigger: ACCCGCGTCCCCTTGCAACAAGAGGAAGTACAGCCT...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGGTGTACTGGGTGGTGTaGCCCAACCACGAGTCGTCG +
Preference number: 5 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLEVYWVV*PNHESS
Trigger: CGACGACTCGTGGTTGGGCAACACCACCCAGTACAC...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTTCGGTGGTCAGCGCGTaGATGGCGGCCACGATGGCC +
Preference number: 5 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSSVVSA*MAATMA
Trigger: GGCCATCGTGGCCGCCATCAACGCGCTGACCACCGA...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTTGCTCCAGGGTGGTCTaGCGGGACTTGACAGGGACG +
Preference number: 5 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLCSRVV*RDLTGT
Trigger: CGTCCCTGTCAAGTCCCGCAAGACCACCCTGGAGCA...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCCGACGGGCTCCACCTaGAGCGCCACTGAGGGCGGC +
Preference number: 5 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLPTGST*SATEGG
Trigger: GCCGCCCTCAGTGGCGCTCAAGGTGGAGCCCGTCGG...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGCCGACGGGCTCCACCTaGAGCGCCACTGAGGGCGGC +
Preference number: 5 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWPTGST*SATEGG
Trigger: GCCGCCCTCAGTGGCGCTCAAGGTGGAGCCCGTCGG...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GATGGCGTTACCGTTGGCGGGAAGGTAGGTGAAACGCTGGTACTGGCTTCGCTTCCGACGGGCTCCACCTaGAGCGCCACTGAGGGCGGC +
Preference number: 5 (lower is better)
Translates to: DGVTVGGKVGETLVLASLPTGST*SATEGG
Trigger: GCCGCCCTCAGTGGCGCTCAAGGTGGAGCCCGTCGG...AAGCGAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCAACGGTAACGCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CAA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCGAGCATTCGATGGGGTaGGAGGCCACCTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: RLCRSARYRPFLLREPFLEHSMG*EATCRD
Trigger: GTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCTC...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTGAGCATTCGATGGGGTaGGAGGCCACCTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLEHSMG*EATCRD
Trigger: GTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCTC...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGGAGCATTCGATGGGGTaGGAGGCCACCTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: QETRLCRSARYRPFLLREEHSMG*EATCRD
Trigger: GTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCTC...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTGCTCAGCCCGAAGGCACTTCCAGTATaGAACCCCAGGGGTGCCAGA +
Preference number: 5 (lower is better)
Translates to: VGRSHERPLHGGSPVLSPKALPV*NPRGAR
Trigger: TCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCTT...CGGGCTGAGCACGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CCCAGGGGTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCAAGGCACTTCCAGTATaGAACCCCAGGGGTGCCAGA +
Preference number: 5 (lower is better)
Translates to: PRGARRAGRGVKLRVGRSKALPV*NPRGAR
Trigger: TCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCTT...GGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS GCA 90 bp CTTCAGCAGCACAGCTGTCGGCTCACACAAAAACCCACAGCCGGATaGAGACACGGGCCACGCAGAGCCTCTGCTCCGTGCCACACCCCA +
Preference number: 5 (lower is better)
Translates to: LQQHSCRLTQKPTAG*RHGPRRASAPCHTP
Trigger: TGGGGTGTGGCACGGAGCAGAGGCTCTGCGTGGCCCGTGTCTGCATCCGGCTGTGGGTTTTTGTGTGAGCCGACAGCTGTGCTGCTGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591089.1
CDS CCA 90 bp AAAGTGCAGGTGCCAGGTGCCGGCCGCGATGCTGGGAAGATGCTGTaGCTGTCTCTCCACGAACCAAGCGACCCACAGGTCCACACCAGC +
Preference number: 5 (lower is better)
Translates to: KVQVPGAGRDAGKML*LSLHEPSDPQVHTS
Trigger: GCTGGTGTGGACCTGTGGGTCGCTTGGTTCGTGGAGAGACAGCCACAGCATCTTCCCAGCATCGCGGCCGGCACCTGGCACCTGCACTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586695.1
CDS CCA 90 bp GTCTCTGACGGCCAAAGTGCAGGTGCCAGGTGCCGGCCGCGATGCTaGGAAGATGCTGTGGCTGTCTCTCCACGAACCAAGCGACCCACA +
Preference number: 5 (lower is better)
Translates to: VSDGQSAGARCRPRC*EDAVAVSPRTKRPT
Trigger: TGTGGGTCGCTTGGTTCGTGGAGAGACAGCCACAGCATCTTCCCAGCATCGCGGCCGGCACCTGGCACCTGCACTTTGGCCGTCAGAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586695.1
CDS-3UTR CAA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGGCGGCTGCCGGCCGTaGAGGCTGTACTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSGGCRP*RLYFLL
Trigger: CAAGAGGAAGTACAGCCTCAACGGCCGGCAGCCGCC...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGCTCCAGGGTGGTCTaGCGGGACTTGACAGGGACG +
Preference number: 5 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGCSRVV*RDLTGT
Trigger: CGTCCCTGTCAAGTCCCGCAAGACCACCCTGGAGCA...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCTCCAGGACTTTGGTGTaGGAGAGGATGGCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: RDAIVPERTVQAVPSAGASRTLV*ERMASW
Trigger: CCACGAGGCCATCCTCTCCAACACCAAAGTCCTGGA...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCGGGATCTCCAGGACTTaGGTGTTGGAGAGGATGGCC +
Preference number: 5 (lower is better)
Translates to: RDAIVPERTVQAVPSAGAGISRT*VLERMA
Trigger: GGCCATCCTCTCCAACACCAAAGTCCTGGAGATCCC...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCGTGCGGCCGCTGGGTaGCGGGACGTGAACGCGGAA +
Preference number: 5 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLRAAAG*RDVNAE
Trigger: TTCCGCGTTCACGTCCCGCAACCCAGCGGCCGCACG...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCCGTGCGGCCGCTGGGTaGCGGGACGTGAACGCGGAA +
Preference number: 5 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFRAAAG*RDVNAE
Trigger: TTCCGCGTTCACGTCCCGCAACCCAGCGGCCGCACG...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CCACCAGAGAATTCGGCTTGCACAGGTCCCGGTCAGTTTTCGCTTCCATCTCCCCGTGCGGCCGCTGGGTaGCGGGACGTGAACGCGGAA +
Preference number: 5 (lower is better)
Translates to: PPENSACTGPGQFSLPSPRAAAG*RDVNAE
Trigger: TTCCGCGTTCACGTCCCGCAACCCAGCGGCCGCACG...GGGAGATGGAAGCGAAAACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CAA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGGAGTCCTGCAGGAAGTaGTGGCCAGACAGGACCATC +
Preference number: 5 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLESCRK*WPDRTI
Trigger: GATGGTCCTGTCTGGCCACAACTTCCTGCAGGACTC...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACAAGGCACTTCCAGTATaGAACCCCAGGGGTGCCAGA +
Preference number: 5 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDKALPV*NPRGAR
Trigger: TCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCTT...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp AGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCAACGGATGCCGGTTATaGCTGACAGGGAAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: RDAIVPERTVQAVPSAGANGCRL*LTGKPS
Trigger: GGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTT...GGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCCAGGCAGGTCGGCTCTaGGGTGGCAGGCGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: PHVFTVTCRPTGWPSGCFQAGRL*GGRREW
Trigger: CCACTCCCGCCTGCCACCCAAGAGCCGACCTGCCTG...GAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CCGTCCTCATGCACCTCTGGCAGCAGCCGTGGCCCGGCAGTCGGAGACTCGTCCTCTTCAGGCTCTCGCTaGACCGTTACAGGAATAGGG +
Preference number: 5 (lower is better)
Translates to: PSSCTSGSSRGPAVGDSSSSGSR*TVTGIG
Trigger: CCCTATTCCTGTAACGGTCAAGCGAGAGCCTGAAGA...GGACGAGTCTCCGACTGCCGGGCCACGGCTGCTGCCAGAGGTGCATGAGGACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CAA 90 bp TCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGAGGCTGTACTTCCTCTaGTTGCAAGGGGACGCGGGT +
Preference number: 5 (lower is better)
Translates to: SNCVWAVPMKGPCTVGLPRLYFL*LQGDAG
Trigger: ACCCGCGTCCCCTTGCAACAAGAGGAAGTACAGCCT...CGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTCGGTGGTCAGCGCGTaGATGGCGGCCACGATGGCC +
Preference number: 5 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQSVVSA*MAATMA
Trigger: GGCCATCGTGGCCGCCATCAACGCGCTGACCACCGA...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTGGTCTTGCGGGACTaGACAGGGACGCCATCTCCC +
Preference number: 5 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSVVLRD*TGTPSP
Trigger: GGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCAC...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCTCCAGGACTTTGGTGTaGGAGAGGATGGCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: RLCRSARYRPFLLREPFLSRTLV*ERMASW
Trigger: CCACGAGGCCATCCTCTCCAACACCAAAGTCCTGGA...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCGGGATCTCCAGGACTTaGGTGTTGGAGAGGATGGCC +
Preference number: 5 (lower is better)
Translates to: SNCVRRENARPSEAAMDAGISRT*VLERMA
Trigger: GGCCATCCTCTCCAACACCAAAGTCCTGGAGATCCC...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTGGGATCTCCAGGACTTaGGTGTTGGAGAGGATGGCC +
Preference number: 5 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLGISRT*VLERMA
Trigger: GGCCATCCTCTCCAACACCAAAGTCCTGGAGATCCC...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGGAGTCCTGCAGGAAGTaGTGGCCAGACAGGACCATC +
Preference number: 5 (lower is better)
Translates to: QETRLCRSARYRPFLLREESCRK*WPDRTI
Trigger: GATGGTCCTGTCTGGCCACAACTTCCTGCAGGACTC...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACCAGGCAGGTCGGCTCTaGGGTGGCAGGCGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: FLSVSETQETRLCRSARYQAGRL*GGRREW
Trigger: CCACTCCCGCCTGCCACCCAAGAGCCGACCTGCCTG...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACTCTTCAGGCTCTCGCTaGACCGTTACAGGAATAGGG +
Preference number: 5 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDSSGSR*TVTGIG
Trigger: CCCTATTCCTGTAACGGTCAAGCGAGAGCCTGAAGA...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS TCA 90 bp TGTGTTCCATTAACCTGGAACCGGGCAGCGCGCAGCTCCCACTCCTaGTCAGGGGACGCCACACTGCGTTTGCACACACACAGCACGACG +
Preference number: 5 (lower is better)
Translates to: CVPLTWNRAARSSHS*SGDATLRLHTHSTT
Trigger: CGTCGTGCTGTGTGTGTGCAAACGCAGTGTGGCGTCCCCTGATCAGGAGTGGGAGCTGCGCGCTGCCCGGTTCCAGGTTAATGGAACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590224.5
CDS-3UTR CAA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCTGGAAAAACTGGTTATaGTTGTGGTACAGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAAWKNWL*LWYRPK
Trigger: CTTGGGCCTGTACCACAACAATAACCAGTTTTTCCA...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GGTCACCCAGGGACTATGGTGCTACGTCCAGGAGAGAAGAGACGACGGAGGCAAGTGGAGGGGGACCGTTaGGAGCTAGGGAGGACGTCT +
Preference number: 5 (lower is better)
Translates to: GHPGTMVLRPGEKRRRRQVEGDR*ELGRTS
Trigger: AGACGTCCTCCCTAGCTCCAAACGGTCCCCCTCCAC...TTGCCTCCGTCGTCTCTTCTCTCCTGGACGTAGCACCATAGTCCCTGGGTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CAA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTCGGGGTCCGTGGTCTaGGGAGACACGCAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQSGSVV*GDTQGD
Trigger: GTCTCCCTGCGTGTCTCCCAAGACCACGGACCCCGA...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTCTGTACTTCCTCTTGTaGCAAGGGGACGCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVLYFLL*QGDAGL
Trigger: CAGACCCGCGTCCCCTTGCAACAAGAGGAAGTACAG...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTGCTCCAGGGTGGTCTaGCGGGACTTGACAGGGACG +
Preference number: 5 (lower is better)
Translates to: GSPFSISDVLFSDFTAGACSRVV*RDLTGT
Trigger: CGTCCCTGTCAAGTCCCGCAAGACCACCCTGGAGCA...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATCCGACGGGCTCCACCTaGAGCGCCACTGAGGGCGGC +
Preference number: 5 (lower is better)
Translates to: DREALLGEDTSALLLFIHPTGST*SATEGG
Trigger: GCCGCCCTCAGTGGCGCTCAAGGTGGAGCCCGTCGG...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp CCTACAGCTACTGTCAATCACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGCGGCCGCTGGGTaGCGGGACGTGAACGCGGAA +
Preference number: 5 (lower is better)
Translates to: PTATVNHSSWLSRVLLELRAAAG*RDVNAE
Trigger: TTCCGCGTTCACGTCCCGCAACCCAGCGGCCGCACG...CAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGTGATTGACAGTAGCTGTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp ACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTGAGCATTCGATGGGGTaGGAGGCCACCTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: TVQAVPSAGALSPSATFCEHSMG*EATCRD
Trigger: GTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCTC...ACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGAGTCCTGCAGGAAGTaGTGGCCAGACAGGACCATC +
Preference number: 5 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVESCRK*WPDRTI
Trigger: GATGGTCCTGTCTGGCCACAACTTCCTGCAGGACTC...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGAGTCCTGCAGGAAGTaGTGGCCAGACAGGACCATC +
Preference number: 5 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKESCRK*WPDRTI
Trigger: GATGGTCCTGTCTGGCCACAACTTCCTGCAGGACTC...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCACCAGAGAATTCGGCTaGCACAGGTCCCGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: SNCVRRENARPSEAAMDATREFG*HRSRSV
Trigger: AACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGT...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CCCAGGGGTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCTGCTTTCCTTCTTGTaGGAGAGCCAATCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: PRGARRAGRGVKLRVGRSLLSFL*ESQSLH
Trigger: GTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCAG...GGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCCCCAGACGCACTGCTTTCCTTCTTGTaGGAGAGCCAATCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: RPRRRWTPARAATGAPDALLSFL*ESQSLH
Trigger: GTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCAG...TGCGTCTGGGGCTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGGGGATGGCCTTCAGGTaGTTTCTTTCCGTGAGTGAG +
Preference number: 5 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLGMAFR*FLSVSE
Trigger: CTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GCTGAACTGAGTGCTCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGGGGGCAGCTACTGCTaGGAGGCGCACTCACCTGCT +
Preference number: 5 (lower is better)
Translates to: AELSAPMWQLGVGARAGEGGSYC*EAHSPA
Trigger: AGCAGGTGAGTGCGCCTCCAAGCAGTAGCTGCCCCC...CTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGAGCACTCAGTTCAGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS GCA 90 bp ACTGGTTATTGTTGTGGTACAGGCCCAAGCACGAGGTTATCTCGATaGGAGGACTCTCCAGGGCAGGGGCCCCATCAGGCCTGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: TGYCCGTGPSTRLSR*EDSPGQGPHQAWCG
Trigger: GCCACACCAGGCCTGATGGGGCCCCTGCCCTGGAGAGTCCTCGCATCGAGATAACCTCGTGCTTGGGCCTGTACCACAACAATAACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS CCA 90 bp GCGCCGAAGCCCAGGCCGCAGATGGCCCCTGGTGAAGAGCATACCTaGGGCTTTCTCCACGAAAATGACCTTGGAGTCCTGCAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: APKPRPQMAPGEEHT*GFLHENDLGVLQEV
Trigger: AACTTCCTGCAGGACTCCAAGGTCATTTTCGTGGAGAAAGCCCCAGGTATGCTCTTCACCAGGGGCCATCTGCGGCCTGGGCTTCGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591089.1
CDS-3UTR CAA 90 bp GTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACCTGGAAAGCTGGTGCTaGGCATCCGCGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: VVSASLEKAPHALMFTAYLESWC*ASARRR
Trigger: CCGCCGCCGCGCGGATGCCAAGCACCAGCTTTCCAG...GTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CAA 90 bp ATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCCTGGAAAGCTGGTGCTaGGCATCCGCGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: ICLFTVSSFRVQMHTRTPLESWC*ASARRR
Trigger: CCGCCGCCGCGCGGATGCCAAGCACCAGCTTTCCAG...GGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CAA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGGTGGAGGGGGACCGTTaGGAGCTAGGGAGGACGTCT +
Preference number: 5 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWVEGDR*ELGRTS
Trigger: AGACGTCCTCCCTAGCTCCAAACGGTCCCCCTCCAC...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp TACGGCGACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCTCGGTGGTCAGCGCGTaGATGGCGGCCACGATGGCC +
Preference number: 5 (lower is better)
Translates to: YGDVVSASLEKAPHALMFSVVSA*MAATMA
Trigger: GGCCATCGTGGCCGCCATCAACGCGCTGACCACCGA...GAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CAA 90 bp CTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTCGTGCGGCCGCTGGGTaGCGGGACGTGAACGCGGAA +
Preference number: 5 (lower is better)
Translates to: LSFSGHRWLGLTNGTSHSRAAAG*RDVNAE
Trigger: TTCCGCGTTCACGTCCCGCAACCCAGCGGCCGCACG...ACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGTCCACGAAAATGACCTaGGAGTCCTGCAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLESTKMT*ESCRKL
Trigger: CAACTTCCTGCAGGACTCCAAGGTCATTTTCGTGGA...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGTCCACGAAAATGACCTaGGAGTCCTGCAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: ENARPSEAAMDASKSSDWSTKMT*ESCRKL
Trigger: CAACTTCCTGCAGGACTCCAAGGTCATTTTCGTGGA...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTACCAGAGAATTCGGCTaGCACAGGTCCCGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGTREFG*HRSRSV
Trigger: AACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGT...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTTCACCGGTCCACAGGTaGGAGCAGGCTCATAATCAT +
Preference number: 5 (lower is better)
Translates to: AIVPERTVQAVPSAGALSSPVHR*EQAHNH
Trigger: ATGATTATGAGCCTGCTCCAACCTGTGGACCGGTGA...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTGGCTGTAGTATGGTCTaGGGAGAGGACTTAACCCCT +
Preference number: 5 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLGCSMV*GEDLTP
Trigger: AGGGGTTAAGTCCTCTCCCAAGACCATACTACAGCC...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACTCCCTGCTTTCCTTCTaGTTGGAGAGCCAATCTTTG +
Preference number: 5 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDSLLSF*LESQSL
Trigger: CAAAGATTGGCTCTCCAACAAGAAGGAAAGCAGGGA...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAAAGGCACTTCCAGTATaGAACCCCAGGGGTGCCAGA +
Preference number: 5 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKKALPV*NPRGAR
Trigger: TCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCTT...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCACACGTGCTATTCAAGTTACTaGTGCTATGTTCGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: LLQCRVQGTQPQVGRGHTCYSSY*CYVRSQ
Trigger: CTGGCTTCGAACATAGCACAAGTAACTTGAATAGCA...CGTGTGGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS GCA 90 bp CATTCTCCAAGTAGCCATGCAGCTGGCGAGAGAACAGAAAACACCTaGTCAGCACCCAGAGCACAGACCGCCGGGAGTCACCGGAACGCA +
Preference number: 5 (lower is better)
Translates to: HSPSSHAAGERTENT*SAPRAQTAGSHRNA
Trigger: TGCGTTCCGGTGACTCCCGGCGGTCTGTGCTCTGGGTGCTGAGCAGGTGTTTTCTGTTCTCTCGCCAGCTGCATGGCTACTTGGAGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591065.1
CDS-3UTR CAA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACTGGAAAAACTGGTTATaGTTGTGGTACAGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDWKNWL*LWYRPK
Trigger: CTTGGGCCTGTACCACAACAATAACCAGTTTTTCCA...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTAGTGGAGGGGGACCGTTaGGAGCTAGGGAGGACGTCT +
Preference number: 5 (lower is better)
Translates to: VIADREALLGEDTSALLLVEGDR*ELGRTS
Trigger: AGACGTCCTCCCTAGCTCCAAACGGTCCCCCTCCAC...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp ACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTACCGTTGGGTGGAGGGGGACCGTTaGGAGCTAGGGAGGACGTCT +
Preference number: 5 (lower is better)
Translates to: TPRAHVHGLRLERWRYRWVEGDR*ELGRTS
Trigger: AGACGTCCTCCCTAGCTCCAAACGGTCCCCCTCCAC...CCAACGGTAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CAA 90 bp CGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTCGGGGTCCGTGGTCTaGGGAGACACGCAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: RFCVFRKSTPRAHVHGLRSGSVV*GDTQGD
Trigger: GTCTCCCTGCGTGTCTCCCAAGACCACGGACCCCGA...CCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CAA 90 bp ACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTCTGTACTTCCTCTTGTaGCAAGGGGACGCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: TVQAVPSAGALSPSATFCLYFLL*QGDAGL
Trigger: CAGACCCGCGTCCCCTTGCAACAAGAGGAAGTACAG...ACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCCTGTACTTCCTCTTGTaGCAAGGGGACGCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: GSPFSISDVLFSDFTAGALYFLL*QGDAGL
Trigger: CAGACCCGCGTCCCCTTGCAACAAGAGGAAGTACAG...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTGTGTACTGGGTGGTGTaGCCCAACCACGAGTCGTCG +
Preference number: 5 (lower is better)
Translates to: GALSPSATFCSVTSQPEPVYWVV*PNHESS
Trigger: CGACGACTCGTGGTTGGGCAACACCACCCAGTACAC...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp CAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCATCGGTGGTCAGCGCGTaGATGGCGGCCACGATGGCC +
Preference number: 5 (lower is better)
Translates to: QGIDGSVSLTGHHTVKCASVVSA*MAATMA
Trigger: GGCCATCGTGGCCGCCATCAACGCGCTGACCACCGA...TGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp ATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCTCGGTGGTCAGCGCGTaGATGGCGGCCACGATGGCC +
Preference number: 5 (lower is better)
Translates to: ICLFTVSSFRVQMHTRTPSVVSA*MAATMA
Trigger: GGCCATCGTGGCCGCCATCAACGCGCTGACCACCGA...GGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp AAAGATGGCGTTACCGTTGGCGGGAAGGTAGGTGAAACGCTGGTACTGGCTTCGGTGGTCTTGCGGGACTaGACAGGGACGCCATCTCCC +
Preference number: 5 (lower is better)
Translates to: KDGVTVGGKVGETLVLASVVLRD*TGTPSP
Trigger: GGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCAC...CGAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCAACGGTAACGCCATCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CAA 90 bp GGTCACCCAGGGACTATGGTGCTACGTCCAGGAGAGAAGAGACGACGGAGGCAATCCAGGACTTTGGTGTaGGAGAGGATGGCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: GHPGTMVLRPGEKRRRRQSRTLV*ERMASW
Trigger: CCACGAGGCCATCCTCTCCAACACCAAAGTCCTGGA...TTGCCTCCGTCGTCTCTTCTCTCCTGGACGTAGCACCATAGTCCCTGGGTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CAA 90 bp TTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTCGTGCGGCCGCTGGGTaGCGGGACGTGAACGCGGAA +
Preference number: 5 (lower is better)
Translates to: FPFQGIDGSVSLTGHHTVRAAAG*RDVNAE
Trigger: TTCCGCGTTCACGTCCCGCAACCCAGCGGCCGCACG...AACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp CGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCTCCACGAAAATGACCTaGGAGTCCTGCAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: RLCRSARYRPFLLREPFLSTKMT*ESCRKL
Trigger: CAACTTCCTGCAGGACTCCAAGGTCATTTTCGTGGA...GAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACGCGGCCTTGGAGAGCCAATCTTaGCACATATTAATGTTCAGC +
Preference number: 5 (lower is better)
Translates to: RDSYSAGCRVPSRRWDAALESQS*HILMFS
Trigger: GCTGAACATTAATATGTGCAAAGATTGGCTCTCCAA...GGCCGCGTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGTCCCTGCTTTCCTTCTaGTTGGAGAGCCAATCTTTG +
Preference number: 5 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLSLLSF*LESQSL
Trigger: CAAAGATTGGCTCTCCAACAAGAAGGAAAGCAGGGA...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp ACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGACACAAGAGACGCGATaGTGCCGGAGCGCACGGTAC +
Preference number: 5 (lower is better)
Translates to: TFCSVTSQPEPPPAGAIQTQETR*CRSARY
Trigger: GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGT...CTGAATTGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGGATGGCCTTCAGGTaGTTTCTTTCCGTGAGTGAG +
Preference number: 5 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKGMAFR*FLSVSE
Trigger: CTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCAGGGGGCAGCTACTGCTaGGAGGCGCACTCACCTGCT +
Preference number: 5 (lower is better)
Translates to: TAPGFLGSSSNCVRRENAGGSYC*EAHSPA
Trigger: AGCAGGTGAGTGCGCCTCCAAGCAGTAGCTGCCCCC...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTCTTCAGGCTCTCGCTaGACCGTTACAGGAATAGGG +
Preference number: 5 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHSSGSR*TVTGIG
Trigger: CCCTATTCCTGTAACGGTCAAGCGAGAGCCTGAAGA...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTTCTTCAGGCTCTCGCTaGACCGTTACAGGAATAGGG +
Preference number: 5 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVSSGSR*TVTGIG
Trigger: CCCTATTCCTGTAACGGTCAAGCGAGAGCCTGAAGA...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp ATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCGGCGGCTGCCGGCCGTaGAGGCTGTACTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: ICLFTVSSFRVQMHTRTPGGCRP*RLYFLL
Trigger: CAAGAGGAAGTACAGCCTCAACGGCCGGCAGCCGCC...GGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp ACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTCGTTTCTGCGTCTGCTCCAGGGTGGTCTaGCGGGACTTGACAGGGACG +
Preference number: 5 (lower is better)
Translates to: TVKCATRHAALRRRRFCVCSRVV*RDLTGT
Trigger: CGTCCCTGTCAAGTCCCGCAAGACCACCCTGGAGCA...GACGCAGAAACGACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGTCCAGGACTTTGGTGTaGGAGAGGATGGCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLSRTLV*ERMASW
Trigger: CCACGAGGCCATCCTCTCCAACACCAAAGTCCTGGA...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GATGGCGTTACCGTTGGCGGGAAGGTAGGTGAAACGCTGGTACTGGCTTCGCTTTCCAGGACTTTGGTGTaGGAGAGGATGGCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: DGVTVGGKVGETLVLASLSRTLV*ERMASW
Trigger: CCACGAGGCCATCCTCTCCAACACCAAAGTCCTGGA...AAGCGAAGCCAGTACCAGCGTTTCACCTACCTTCCCGCCAACGGTAACGCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CAA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCGAGCATTCGATGGGGTaGGAGGCCACCTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFEHSMG*EATCRD
Trigger: GTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCTC...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CAA 90 bp GGTCTTGGGAGAGGACTTAACCCCTGGCTCACCGGTCCACAGGTTGGAGCAGGCTCCACGAAAATGACCTaGGAGTCCTGCAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: GLGRGLNPWLTGPQVGAGSTKMT*ESCRKL
Trigger: CAACTTCCTGCAGGACTCCAAGGTCATTTTCGTGGA...GCCTGCTCCAACCTGTGGACCGGTGAGCCAGGGGTTAAGTCCTCTCCCAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CAA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCACCAGAGAATTCGGCTaGCACAGGTCCCGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: GSPFSISDVLFSDFTAGATREFG*HRSRSV
Trigger: AACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGT...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCACTGGCATTCAGTCAGTaGGAGGTTCTGAGTGGTACC +
Preference number: 5 (lower is better)
Translates to: SATFCSVTSQPEPPPAGALAFSQ*EVLSGT
Trigger: GGTACCACTCAGAACCTCCAACTGACTGAATGCCAG...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTCTGGCATTCAGTCAGTaGGAGGTTCTGAGTGGTACC +
Preference number: 5 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSLAFSQ*EVLSGT
Trigger: GGTACCACTCAGAACCTCCAACTGACTGAATGCCAG...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTAACGGATGCCGGTTATaGCTGACAGGGAAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GALSPSATFCSVTSQPEPNGCRL*LTGKPS
Trigger: GGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTT...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTAACACAAGAGACGCGATaGTGCCGGAGCGCACGGTAC +
Preference number: 5 (lower is better)
Translates to: VIADREALLGEDTSALLLTQETR*CRSARY
Trigger: GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGT...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACACACAAGAGACGCGATaGTGCCGGAGCGCACGGTAC +
Preference number: 5 (lower is better)
Translates to: FLSVSETQETRLCRSARYTQETR*CRSARY
Trigger: GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGT...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGGGATGGCCTTCAGGTaGTTTCTTTCCGTGAGTGAG +
Preference number: 5 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSGMAFR*FLSVSE
Trigger: CTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACACAGTCTGGTGCAGGTaGCGGTCGCAGCCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: FLSFSGHRWLGLTNGTSHTVWCR*RSQPPG
Trigger: TCCTGGGGGCTGCGACCGCAACCTGCACCAGACTGT...GTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CAA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCCTGGAAAGCTGGTGCTaGGCATCCGCGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTLESWC*ASARRR
Trigger: CCGCCGCCGCGCGGATGCCAAGCACCAGCTTTCCAG...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CAA 90 bp AAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTAGGCGGCTGCCGGCCGTaGAGGCTGTACTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: KKHPTRSCSRLTVRKMALGGCRP*RLYFLL
Trigger: CAAGAGGAAGTACAGCCTCAACGGCCGGCAGCCGCC...TAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CAA 90 bp CAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAGTGGTCTTGCGGGACTaGACAGGGACGCCATCTCCC +
Preference number: 5 (lower is better)
Translates to: QGIDGSVSLTGHHTVKCAVVLRD*TGTPSP
Trigger: GGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCAC...TGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp GTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACTGCTCCAGGGTGGTCTaGCGGGACTTGACAGGGACG +
Preference number: 5 (lower is better)
Translates to: VVSASLEKAPHALMFTAYCSRVV*RDLTGT
Trigger: CGTCCCTGTCAAGTCCCGCAAGACCACCCTGGAGCA...GTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CAA 90 bp GGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGCCGACGGGCTCCACCTaGAGCGCCACTGAGGGCGGC +
Preference number: 5 (lower is better)
Translates to: GACKIAIPICLFTVSSFRPTGST*SATEGG
Trigger: GCCGCCCTCAGTGGCGCTCAAGGTGGAGCCCGTCGG...CCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp ATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCGAGCATTCGATGGGGTaGGAGGCCACCTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: ICLFTVSSFRVQMHTRTPEHSMG*EATCRD
Trigger: GTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCTC...GGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp CAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAGAGCATTCGATGGGGTaGGAGGCCACCTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: QGIDGSVSLTGHHTVKCAEHSMG*EATCRD
Trigger: GTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCTC...TGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp ACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTACCGTTGGGAGTCCTGCAGGAAGTaGTGGCCAGACAGGACCATC +
Preference number: 5 (lower is better)
Translates to: TPRAHVHGLRLERWRYRWESCRK*WPDRTI
Trigger: GATGGTCCTGTCTGGCCACAACTTCCTGCAGGACTC...CCAACGGTAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CAA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCACCGGTCCACAGGTaGGAGCAGGCTCATAATCAT +
Preference number: 5 (lower is better)
Translates to: GSPFSISDVLFSDFTAGASPVHR*EQAHNH
Trigger: ATGATTATGAGCCTGCTCCAACCTGTGGACCGGTGA...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp AGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCACCGGTCCACAGGTaGGAGCAGGCTCATAATCAT +
Preference number: 5 (lower is better)
Translates to: SPRRRFQNGCRLLLTGKPSPVHR*EQAHNH
Trigger: ATGATTATGAGCCTGCTCCAACCTGTGGACCGGTGA...GGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATCTGCTTTCCTTCTTGTaGGAGAGCCAATCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHLLSFL*ESQSLH
Trigger: GTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCAG...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTCCCTGCTTTCCTTCTaGTTGGAGAGCCAATCTTTG +
Preference number: 5 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHSLLSF*LESQSL
Trigger: CAAAGATTGGCTCTCCAACAAGAAGGAAAGCAGGGA...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp AGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGCCCTCCTGGAAGGCACTTCCAGTATaGAACCCCAGGGGTGCCAGA +
Preference number: 5 (lower is better)
Translates to: RRRFQNGCRLLLTGKPSWKALPV*NPRGAR
Trigger: TCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCTT...CCAGGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CCCAGGGGTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCTTGTCCAGTAACCTATaGATGTGCTATTCAAGTTAC +
Preference number: 5 (lower is better)
Translates to: PRGARRAGRGVKLRVGRSLSSNL*MCYSSY
Trigger: GTAACTTGAATAGCACATCAATAGGTTACTGGACAA...GGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCACCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GCTGCACGTGACTCCTACAGTGCCGGGTGCAGGGTACCCAGCCGCAGGTGGGACCAGGTTTTTCTGCTTTaGTCCAGTAACCTATTGATG +
Preference number: 5 (lower is better)
Translates to: AARDSYSAGCRVPSRRWDQVFLL*SSNLLM
Trigger: CATCAATAGGTTACTGGACAAAAGCAGAAAAACCTG...GTCCCACCTGCGGCTGGGTACCCTGCACCCGGCACTGTAGGAGTCACGTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCCAGGCAGGTCGGCTCTaGGGTGGCAGGCGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTQAGRL*GGRREW
Trigger: CCACTCCCGCCTGCCACCCAAGAGCCGACCTGCCTG...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTGGAAAAACTGGTTATaGTTGTGGTACAGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHWKNWL*LWYRPK
Trigger: CTTGGGCCTGTACCACAACAATAACCAGTTTTTCCA...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTCGGGGTCCGTGGTCTaGGGAGACACGCAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRSGSVV*GDTQGD
Trigger: GTCTCCCTGCGTGTCTCCCAAGACCACGGACCCCGA...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp TACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACTGTACTTCCTCTTGTaGCAAGGGGACGCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: YVQTDGMAFRLFLSVSETLYFLL*QGDAGL
Trigger: CAGACCCGCGTCCCCTTGCAACAAGAGGAAGTACAG...TGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp ACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTCGTTTCTGCGTCCTGTACTTCCTCTTGTaGCAAGGGGACGCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: TVKCATRHAALRRRRFCVLYFLL*QGDAGL
Trigger: CAGACCCGCGTCCCCTTGCAACAAGAGGAAGTACAG...GACGCAGAAACGACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp AAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTACGTGTACTGGGTGGTGTaGCCCAACCACGAGTCGTCG +
Preference number: 5 (lower is better)
Translates to: KSTPRAHVHGLRLERWRYVYWVV*PNHESS
Trigger: CGACGACTCGTGGTTGGGCAACACCACCCAGTACAC...GTAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CAA 90 bp ATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCGTGTACTGGGTGGTGTaGCCCAACCACGAGTCGTCG +
Preference number: 5 (lower is better)
Translates to: ICLFTVSSFRVQMHTRTPVYWVV*PNHESS
Trigger: CGACGACTCGTGGTTGGGCAACACCACCCAGTACAC...GGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp TTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTGTGGTCTTGCGGGACTaGACAGGGACGCCATCTCCC +
Preference number: 5 (lower is better)
Translates to: FPFQGIDGSVSLTGHHTVVVLRD*TGTPSP
Trigger: GGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCAC...AACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCTCCAGGACTTTGGTGTaGGAGAGGATGGCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFSRTLV*ERMASW
Trigger: CCACGAGGCCATCCTCTCCAACACCAAAGTCCTGGA...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CAA 90 bp TACGGCGACGTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCGGGATCTCCAGGACTTaGGTGTTGGAGAGGATGGCC +
Preference number: 5 (lower is better)
Translates to: YGDVVSASLEKAPHALMFGISRT*VLERMA
Trigger: GGCCATCCTCTCCAACACCAAAGTCCTGGAGATCCC...GAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CAA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGTCACCGGTCCACAGGTaGGAGCAGGCTCATAATCAT +
Preference number: 5 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLSPVHR*EQAHNH
Trigger: ATGATTATGAGCCTGCTCCAACCTGTGGACCGGTGA...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTGGCTGTAGTATGGTCTaGGGAGAGGACTTAACCCCT +
Preference number: 5 (lower is better)
Translates to: GALSPSATFCSVTSQPEPGCSMV*GEDLTP
Trigger: AGGGGTTAAGTCCTCTCCCAAGACCATACTACAGCC...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp AGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGTTGGAGAGCCAATCTTaGCACATATTAATGTTCAGC +
Preference number: 5 (lower is better)
Translates to: RAGRGVKLRVGRSHERPLLESQS*HILMFS
Trigger: GCTGAACATTAATATGTGCAAAGATTGGCTCTCCAA...CAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCATCCCTGCTTTCCTTCTaGTTGGAGAGCCAATCTTTG +
Preference number: 5 (lower is better)
Translates to: SATFCSVTSQPEPPPAGASLLSF*LESQSL
Trigger: CAAAGATTGGCTCTCCAACAAGAAGGAAAGCAGGGA...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACAAGGCACTTCCAGTATaGAACCCCAGGGGTGCCAGA +
Preference number: 5 (lower is better)
Translates to: FLSVSETQETRLCRSARYKALPV*NPRGAR
Trigger: TCTGGCACCCCTGGGGTTCAATACTGGAAGTGCCTT...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCGAAACGTTCCAAATGTaGGAGACTCATACTAGAGTC +
Preference number: 5 (lower is better)
Translates to: SNCVRRENARPSEAAMDAETFQM*ETHTRV
Trigger: GACTCTAGTATGAGTCTCCAACATTTGGAACGTTTC...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GTGGGACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTTGCTATTCAAGTTACTaGTGCTATGTTCGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: VGRGHTSSRLRADRRDGLCYSSY*CYVRSQ
Trigger: CTGGCTTCGAACATAGCACAAGTAACTTGAATAGCA...AAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGTCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGCAGGTTTTTCTGCTTTaGTCCAGTAACCTATTGATG +
Preference number: 5 (lower is better)
Translates to: ENARPSEAAMDASKSSDWQVFLL*SSNLLM
Trigger: CATCAATAGGTTACTGGACAAAAGCAGAAAAACCTG...CCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACAAACGGATGCCGGTTATaGCTGACAGGGAAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: YVQTDGMAFRLFLSVSETNGCRL*LTGKPS
Trigger: GGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTT...TGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CAAGAGACGCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGAATCACTTTCTAATGTaGCCGTCTGGTAACCTACAG +
Preference number: 5 (lower is better)
Translates to: QETRLCRSARYRPFLLRENHFLM*PSGNLQ
Trigger: CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATT...CTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGCGTCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGGGATGGCCTTCAGGTaGTTTCTTTCCGTGAGTGAG +
Preference number: 5 (lower is better)
Translates to: LEPQTQVPKRMPVIADREGMAFR*FLSVSE
Trigger: CTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC...TTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGGGGGGCAGCTACTGCTaGGAGGCGCACTCACCTGCT +
Preference number: 5 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRGGSYC*EAHSPA
Trigger: AGCAGGTGAGTGCGCCTCCAAGCAGTAGCTGCCCCC...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS CCA 90 bp GGGGACCGTTTGGAGCTAGGGAGGACGTCTTCCACCTCCACATCGTaGAAAAACTGGTTATTGTTGTGGTACAGGCCCAAGCACGAGGTT +
Preference number: 5 (lower is better)
Translates to: GDRLELGRTSSTSTS*KNWLLLWYRPKHEV
Trigger: AACCTCGTGCTTGGGCCTGTACCACAACAATAACCAGTTTTTCCACGATGTGGAGGTGGAAGACGTCCTCCCTAGCTCCAAACGGTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp TCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTCCACCCGCAGGTGCAAAAAACTGGTTATTGTaGTGGTACAGGCCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: SATFCSVTSQPEPPPAGAKNWLL*WYRPKH
Trigger: GTGCTTGGGCCTGTACCACAACAATAACCAGTTTTT...TGCACCTGCGGGTGGAGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCTCGGGGTCCGTGGTCTaGGGAGACACGCAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTSGSVV*GDTQGD
Trigger: GTCTCCCTGCGTGTCTCCCAAGACCACGGACCCCGA...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATAGGCTGTACTTCCTCTaGTTGCAAGGGGACGCGGGT +
Preference number: 5 (lower is better)
Translates to: DREALLGEDTSALLLFIHRLYFL*LQGDAG
Trigger: ACCCGCGTCCCCTTGCAACAAGAGGAAGTACAGCCT...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp CTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTAGGCTGTACTTCCTCTaGTTGCAAGGGGACGCGGGT +
Preference number: 5 (lower is better)
Translates to: LSFSGHRWLGLTNGTSHSRLYFL*LQGDAG
Trigger: ACCCGCGTCCCCTTGCAACAAGAGGAAGTACAGCCT...ACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp TTTCTAATGTTGCCGTCTGGTAACCTACAGCTACTGTCAATCACAGCTCCTGGCTGCTCCAGGGTGGTCTaGCGGGACTTGACAGGGACG +
Preference number: 5 (lower is better)
Translates to: FLMLPSGNLQLLSITAPGCSRVV*RDLTGT
Trigger: CGTCCCTGTCAAGTCCCGCAAGACCACCCTGGAGCA...GCCAGGAGCTGTGATTGACAGTAGCTGTAGGTTACCAGACGGCAACATTAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp TTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTTGCTCCAGGGTGGTCTaGCGGGACTTGACAGGGACG +
Preference number: 5 (lower is better)
Translates to: FQGIDGSVSLTGHHTVKCCSRVV*RDLTGT
Trigger: CGTCCCTGTCAAGTCCCGCAAGACCACCCTGGAGCA...ACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATTCCAGGACTTTGGTGTaGGAGAGGATGGCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: DREALLGEDTSALLLFIHSRTLV*ERMASW
Trigger: CCACGAGGCCATCCTCTCCAACACCAAAGTCCTGGA...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAGGGATCTCCAGGACTTaGGTGTTGGAGAGGATGGCC +
Preference number: 5 (lower is better)
Translates to: QGIDGSVSLTGHHTVKCAGISRT*VLERMA
Trigger: GGCCATCCTCTCCAACACCAAAGTCCTGGAGATCCC...TGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTTCCACGAAAATGACCTaGGAGTCCTGCAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: GALSPSATFCSVTSQPEPSTKMT*ESCRKL
Trigger: CAACTTCCTGCAGGACTCCAAGGTCATTTTCGTGGA...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACAACCAGAGAATTCGGCTaGCACAGGTCCCGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: YVQTDGMAFRLFLSVSETTREFG*HRSRSV
Trigger: AACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGT...TGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTACCGTTGGCGGGAAGGTACCAGAGAATTCGGCTaGCACAGGTCCCGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: AHVHGLRLERWRYRWREGTREFG*HRSRSV
Trigger: AACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGT...ACCTTCCCGCCAACGGTAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CAA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTAGGCTGTAGTATGGTCTaGGGAGAGGACTTAACCCCT +
Preference number: 5 (lower is better)
Translates to: VIADREALLGEDTSALLLGCSMV*GEDLTP
Trigger: AGGGGTTAAGTCCTCTCCCAAGACCATACTACAGCC...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp AAAGCTGCAGCATCAGCGGCTCATTCTCCAAGTAGCCATGCAGCTGCACGATGGGGCTGTAGTATGGTCTaGGGAGAGGACTTAACCCCT +
Preference number: 5 (lower is better)
Translates to: KAAASAAHSPSSHAAARWGCSMV*GEDLTP
Trigger: AGGGGTTAAGTCCTCTCCCAAGACCATACTACAGCC...CCATCGTGCAGCTGCATGGCTACTTGGAGAATGAGCCGCTGATGCTGCAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CAA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTACTGGCATTCAGTCAGTaGGAGGTTCTGAGTGGTACC +
Preference number: 5 (lower is better)
Translates to: VIADREALLGEDTSALLLLAFSQ*EVLSGT
Trigger: GGTACCACTCAGAACCTCCAACTGACTGAATGCCAG...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TCGAACTGCGTGAGACGAGAAAATGCACGGCCGTCCGAGGCGGCGATGGACGCCTTGGAGAGCCAATCTTaGCACATATTAATGTTCAGC +
Preference number: 5 (lower is better)
Translates to: SNCVRRENARPSEAAMDALESQS*HILMFS
Trigger: GCTGAACATTAATATGTGCAAAGATTGGCTCTCCAA...GGCGTCCATCGCCGCCTCGGACGGCCGTGCATTTTCTCGTCTCACGCAGTTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCTTGGAGAGCCAATCTTaGCACATATTAATGTTCAGC +
Preference number: 5 (lower is better)
Translates to: DCAGAHGTGRSFCGSPFSLESQS*HILMFS
Trigger: GCTGAACATTAATATGTGCAAAGATTGGCTCTCCAA...GGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp AAATGCACGGCCGTCCGAGGCGGCGATGGACGCCAGCAAGAGCAGCGACTGGAGCACAATGAAATGTGTTaGCAGTTTCTGCTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: KCTAVRGGDGRQQEQRLEHNEMC*QFLLLK
Trigger: TTTTAGGAGCAGAAACTGCAAACACATTTCATTGTG...CTCCAGTCGCTGCTCTTGCTGGCGTCCATCGCCGCCTCGGACGGCCGTGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAAGAAACGTTCCAAATGTaGGAGACTCATACTAGAGTC +
Preference number: 5 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKETFQM*ETHTRV
Trigger: GACTCTAGTATGAGTCTCCAACATTTGGAACGTTTC...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GTGCCAGAAGGGCTGGGCGTGGGGTCAAACTGCGTGTGGGCCGTTCCCATGAAATGCTATTCAAGTTACTaGTGCTATGTTCGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: VPEGLGVGSNCVWAVPMKCYSSY*CYVRSQ
Trigger: CTGGCTTCGAACATAGCACAAGTAACTTGAATAGCA...TTTCATGGGAACGGCCCACACGCAGTTTGACCCCACGCCCAGCCCTTCTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CAGCCGGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATAATCACTTTCTAATGTaGCCGTCTGGTAACCTACAG +
Preference number: 5 (lower is better)
Translates to: QPEPPPAGAIQAGSIRGHNHFLM*PSGNLQ
Trigger: CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATT...ATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCCGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp ACGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTAATCACTTTCTAATGTaGCCGTCTGGTAACCTACAG +
Preference number: 5 (lower is better)
Translates to: TRPHVFTVTCRPTGWPSGNHFLM*PSGNLQ
Trigger: CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATT...ACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp ATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAACACGCGGAACCTGGCCTGCGTaGAGCCATGCTGGAGCAGAT +
Preference number: 5 (lower is better)
Translates to: IDGSVSLTGHHTVKCATRGTWPA*SHAGAD
Trigger: ATCTGCTCCAGCATGGCTCAACGCAGGCCAGGTTCC...GCGTGTTGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS CCA 90 bp GGTCATTTCGTATTATTTCATTTAATTTCCTCCTCGGTCCCACCCTaGTCCATGAGTGTCGTGAGCCAGTGCCTGGCTGCCTCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: GHFVLFHLISSSVPP*SMSVVSQCLAASAE
Trigger: CTCTGCCGAGGCAGCCAGGCACTGGCTCACGACACTCATGGACCAGGGTGGGACCGAGGAGGAAATTAAATGAAATAATACGAAATGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586695.1
CDS-3UTR CAA 90 bp TGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAACTGTACTTCCTCTTGTaGCAAGGGGACGCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: CVFRKSTPRAHVHGLRLELYFLL*QGDAGL
Trigger: CAGACCCGCGTCCCCTTGCAACAAGAGGAAGTACAG...TTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CAA 90 bp TGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGGCTGTACTTCCTCTaGTTGCAAGGGGACGCGGGT +
Preference number: 5 (lower is better)
Translates to: CVFRKSTPRAHVHGLRLERLYFL*LQGDAG
Trigger: ACCCGCGTCCCCTTGCAACAAGAGGAAGTACAGCCT...TTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CAA 90 bp GCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATTGTCGGTGGTCAGCGCGTaGATGGCGGCCACGATGGCC +
Preference number: 5 (lower is better)
Translates to: AQFYDALMVWLNKALPVLSVVSA*MAATMA
Trigger: GGCCATCGTGGCCGCCATCAACGCGCTGACCACCGA...CAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp ATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAACACGCGGGATCTCCAGGACTTaGGTGTTGGAGAGGATGGCC +
Preference number: 5 (lower is better)
Translates to: IDGSVSLTGHHTVKCATRGISRT*VLERMA
Trigger: GGCCATCCTCTCCAACACCAAAGTCCTGGAGATCCC...GCGTGTTGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATCCACGAAAATGACCTaGGAGTCCTGCAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: VIADREALLGEDTSALLLSTKMT*ESCRKL
Trigger: CAACTTCCTGCAGGACTCCAAGGTCATTTTCGTGGA...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CCCTTTTCCTTTCCTTTTCAGGGCATCGATGGCTCGGTCTCACTAACGGGACATACCAGAGAATTCGGCTaGCACAGGTCCCGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: PFSFPFQGIDGSVSLTGHTREFG*HRSRSV
Trigger: AACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGT...ATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTGAAAAGGAAAGGAAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp CAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAACCAGAGAATTCGGCTaGCACAGGTCCCGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: QGIDGSVSLTGHHTVKCATREFG*HRSRSV
Trigger: AACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGT...TGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCAGGCTGTAGTATGGTCTaGGGAGAGGACTTAACCCCT +
Preference number: 5 (lower is better)
Translates to: TAPGFLGSSSNCVRRENAGCSMV*GEDLTP
Trigger: AGGGGTTAAGTCCTCTCCCAAGACCATACTACAGCC...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACTGGCATTCAGTCAGTaGGAGGTTCTGAGTGGTACC +
Preference number: 5 (lower is better)
Translates to: YVQTDGMAFRLFLSVSETLAFSQ*EVLSGT
Trigger: GGTACCACTCAGAACCTCCAACTGACTGAATGCCAG...TGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GGTCTTGGGAGAGGACTTAACCCCTGGCTCACCGGTCCACAGGTTGGAGCAGGCTTGGAGAGCCAATCTTaGCACATATTAATGTTCAGC +
Preference number: 5 (lower is better)
Translates to: GLGRGLNPWLTGPQVGAGLESQS*HILMFS
Trigger: GCTGAACATTAATATGTGCAAAGATTGGCTCTCCAA...GCCTGCTCCAACCTGTGGACCGGTGAGCCAGGGGTTAAGTCCTCTCCCAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CAA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTTCCCTGCTTTCCTTCTaGTTGGAGAGCCAATCTTTG +
Preference number: 5 (lower is better)
Translates to: GALSPSATFCSVTSQPEPSLLSF*LESQSL
Trigger: CAAAGATTGGCTCTCCAACAAGAAGGAAAGCAGGGA...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGCACAATGAAATGTGTTaGCAGTTTCTGCTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: SNCVWAVPMKGPCTVGLPHNEMC*QFLLLK
Trigger: TTTTAGGAGCAGAAACTGCAAACACATTTCATTGTG...CGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GCGATTGTGCCGGAGCGCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTTTGTCCAGTAACCTATaGATGTGCTATTCAAGTTAC +
Preference number: 5 (lower is better)
Translates to: AIVPERTVQAVPSAGALSLSSNL*MCYSSY
Trigger: GTAACTTGAATAGCACATCAATAGGTTACTGGACAA...AGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGCGCTCCGGCACAATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TCAAACTGCGTGTGGGCCGTTCCCATGAAAGGCCCCTGCACGGTGGGTCTCCCGTTGTCCAGTAACCTATaGATGTGCTATTCAAGTTAC +
Preference number: 5 (lower is better)
Translates to: SNCVWAVPMKGPCTVGLPLSSNL*MCYSSY
Trigger: GTAACTTGAATAGCACATCAATAGGTTACTGGACAA...CGGGAGACCCACCGTGCAGGGGCCTTTCATGGGAACGGCCCACACGCAGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CGCGGCCACACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTGGCGTTTTTGGTATaGGTTTTCTTAGATGAAGCA +
Preference number: 5 (lower is better)
Translates to: RGHTSSRLRADRRDGLQVVAFLV*VFLDEA
Trigger: TGCTTCATCTAAGAAAACCAATACCAAAAACGCCAC...AACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGTGTGGCCGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACGGGGGCAGCTACTGCTaGGAGGCGCACTCACCTGCT +
Preference number: 5 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHGGSYC*EAHSPA
Trigger: AGCAGGTGAGTGCGCCTCCAAGCAGTAGCTGCCCCC...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329101.8
ENST00000427363.7
ENST00000545796.5
CDS TCA 90 bp GTCATTTCGTATTATTTCATTTACCCGATGAATGATTTGCACGGCTaGGTCCGCTGCTCCATCCATCACGCGGTAGCCGCCGTCTGCGAC +
Preference number: 5 (lower is better)
Translates to: VISYYFIYPMNDLHG*VRCSIHHAVAAVCD
Trigger: GTCGCAGACGGCGGCTACCGCGTGATGGATGGAGCAGCGGACTCAGCCGTGCAAATCATTCATCGGGTAAATGAAATAATACGAAATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590861.1
CDS GCA 90 bp GTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTCGTTTCTaGGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTA +
Preference number: 5 (lower is better)
Translates to: VKCATRHAALRRRRF*VFRKSTPRAHVHGL
Trigger: TAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS CCA 90 bp AGGACGTCTTCCACCTCCACATCGTGGAAAAACTGGTTATTGTTGTaGTACAGGCCCAAGCACGAGGTTATCTCGATGCGAGGACTCTCC +
Preference number: 5 (lower is better)
Translates to: RTSSTSTSWKNWLLL*YRPKHEVISMRGLS
Trigger: GGAGAGTCCTCGCATCGAGATAACCTCGTGCTTGGGCCTGTACCACAACAATAACCAGTTTTTCCACGATGTGGAGGTGGAAGACGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGCTGGAAAGCTGGTGCTaGGCATCCGCGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLLESWC*ASARRR
Trigger: CCGCCGCCGCGCGGATGCCAAGCACCAGCTTTCCAG...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
CDS-3UTR CAA 90 bp GGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGGAGGGGGACCGTTaGGAGCTAGGGAGGACGTCT +
Preference number: 5 (lower is better)
Translates to: GACKIAIPICLFTVSSFRVEGDR*ELGRTS
Trigger: AGACGTCCTCCCTAGCTCCAAACGGTCCCCCTCCAC...CCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp GCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATTGGGCGGCTGCCGGCCGTaGAGGCTGTACTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: AQFYDALMVWLNKALPVLGGCRP*RLYFLL
Trigger: CAAGAGGAAGTACAGCCTCAACGGCCGGCAGCCGCC...CAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTGGTCTTGCGGGACTaGACAGGGACGCCATCTCCC +
Preference number: 5 (lower is better)
Translates to: EPIFAHINVQLLAFSQLEVVLRD*TGTPSP
Trigger: GGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCAC...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp ATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGGGGATCTCCAGGACTTaGGTGTTGGAGAGGATGGCC +
Preference number: 5 (lower is better)
Translates to: INVQLLAFSQLEVLSGTRGISRT*VLERMA
Trigger: GGCCATCCTCTCCAACACCAAAGTCCTGGAGATCCC...CCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTGAACATTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CAA 90 bp GCAGGAGTGTACGTGACAGCCCAGGAAACGTTCCAAATGTTGGAGACTCATACTACCAGAGAATTCGGCTaGCACAGGTCCCGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: AGVYVTAQETFQMLETHTTREFG*HRSRSV
Trigger: AACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGT...AGTATGAGTCTCCAACATTTGGAACGTTTCCTGGGCTGTCACGTACACTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGGGCTGTAGTATGGTCTaGGGAGAGGACTTAACCCCT +
Preference number: 5 (lower is better)
Translates to: GMAFRLFLSVSETQETRLGCSMV*GEDLTP
Trigger: AGGGGTTAAGTCCTCTCCCAAGACCATACTACAGCC...CAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTGCTATTCAAGTTACTaGTGCTATGTTCGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: GSPFSISDVLFSDFTAGACYSSY*CYVRSQ
Trigger: CTGGCTTCGAACATAGCACAAGTAACTTGAATAGCA...GGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTGGCGTTTTTGGTATaGGTTTTCTTAGATGAAGCA +
Preference number: 5 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSVAFLV*VFLDEA
Trigger: TGCTTCATCTAAGAAAACCAATACCAAAAACGCCAC...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCACACAAGAGACGCGATaGTGCCGGAGCGCACGGTAC +
Preference number: 5 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTTQETR*CRSARY
Trigger: GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGT...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS CCA 90 bp TTGGAGCTAGGGAGGACGTCTTCCACCTCCACATCGTGGAAAAACTaGTTATTGTTGTGGTACAGGCCCAAGCACGAGGTTATCTCGATG +
Preference number: 5 (lower is better)
Translates to: LELGRTSSTSTSWKN*LLLWYRPKHEVISM
Trigger: CATCGAGATAACCTCGTGCTTGGGCCTGTACCACAACAATAACCAGTTTTTCCACGATGTGGAGGTGGAAGACGTCCTCCCTAGCTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp TGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAATCGGGGTCCGTGGTCTaGGGAGACACGCAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: CKIAIPICLFTVSSFRVQSGSVV*GDTQGD
Trigger: GTCTCCCTGCGTGTCTCCCAAGACCACGGACCCCGA...TTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp TGCTCGTGCTGGAGAGGTCATTTCGTATTATTTCATTTACGTCATCCAGGTACAGAGCATTCGATGGGGTaGGAGGCCACCTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: CSCWRGHFVLFHLRHPGTEHSMG*EATCRD
Trigger: GTCCCTGCAGGTGGCCTCCAACCCCATCGAATGCTC...TGTACCTGGATGACGTAAATGAAATAATACGAAATGACCTCTCCAGCACGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590313.5
CDS-3UTR CAA 90 bp AAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAGAAAGATGGCGTTACTCCACGAAAATGACCTaGGAGTCCTGCAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: KSTPRAHVHGLRLERWRYSTKMT*ESCRKL
Trigger: CAACTTCCTGCAGGACTCCAAGGTCATTTTCGTGGA...GTAACGCCATCTTTCTAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CAA 90 bp CAGGGCATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCATCCACGAAAATGACCTaGGAGTCCTGCAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: QGIDGSVSLTGHHTVKCASTKMT*ESCRKL
Trigger: CAACTTCCTGCAGGACTCCAAGGTCATTTTCGTGGA...TGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGATGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp ACGTCTTCACGGTTACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCTGCTTTCCTTCTTGTaGGAGAGCCAATCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: TSSRLRADRRDGLQVVSFLLSFL*ESQSLH
Trigger: GTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCAG...GAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTAACCGTGAAGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACTGCTTTCCTTCTTGTaGGAGAGCCAATCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: YVQTDGMAFRLFLSVSETLLSFL*ESQSLH
Trigger: GTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCAG...TGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GCACGGTACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTCACAATGAAATGTGTTaGCAGTTTCTGCTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: ARYRPFLLREPFLHQRRSHNEMC*QFLLLK
Trigger: TTTTAGGAGCAGAAACTGCAAACACATTTCATTGTG...AGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTACCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGCTGACAGGGAAGAAACGTTCCAAATGTaGGAGACTCATACTAGAGTC +
Preference number: 5 (lower is better)
Translates to: LEPQTQVPKRMPVIADREETFQM*ETHTRV
Trigger: GACTCTAGTATGAGTCTCCAACATTTGGAACGTTTC...TTCCCTGTCAGCAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGCTATTCAAGTTACTaGTGCTATGTTCGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQCYSSY*CYVRSQ
Trigger: CTGGCTTCGAACATAGCACAAGTAACTTGAATAGCA...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TACAGGCCGTTCCTTCTGCGGGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGAATCACTTTCTAATGTaGCCGTCTGGTAACCTACAG +
Preference number: 5 (lower is better)
Translates to: YRPFLLREPFLHQRRSVQNHFLM*PSGNLQ
Trigger: CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATT...CTGAACAGAACGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACACACAAGAGACGCGATaGTGCCGGAGCGCACGGTAC +
Preference number: 5 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHTQETR*CRSARY
Trigger: GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGT...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GCAGGAGTGTACGTGACAGCCCAGGAAACGTTCCAAATGTTGGAGACTCATACTGGGATGGCCTTCAGGTaGTTTCTTTCCGTGAGTGAG +
Preference number: 5 (lower is better)
Translates to: AGVYVTAQETFQMLETHTGMAFR*FLSVSE
Trigger: CTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC...AGTATGAGTCTCCAACATTTGGAACGTTTCCTGGGCTGTCACGTACACTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp ATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAACACGCAGAACGCAGCTGCTTTaGCAATTAGCGCCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: IDGSVSLTGHHTVKCATRRTQLL*QLAPSV
Trigger: CACACTGGGCGCTAATTGCAAAAGCAGCTGCGTTCT...GCGTGTTGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CAA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCAAAAAACTGGTTATTGTaGTGGTACAGGCCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: TAPGFLGSSSNCVRRENAKNWLL*WYRPKH
Trigger: GTGCTTGGGCCTGTACCACAACAATAACCAGTTTTT...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCAAAAACTGGTTATTGTaGTGGTACAGGCCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFKNWLL*WYRPKH
Trigger: GTGCTTGGGCCTGTACCACAACAATAACCAGTTTTT...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATTGGTGTACTGGGTGGTGTaGCCCAACCACGAGTCGTCG +
Preference number: 5 (lower is better)
Translates to: AQFYDALMVWLNKALPVLVYWVV*PNHESS
Trigger: CGACGACTCGTGGTTGGGCAACACCACCCAGTACAC...CAATACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp ATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACGTGTACTGGGTGGTGTaGCCCAACCACGAGTCGTCG +
Preference number: 5 (lower is better)
Translates to: IAIPICLFTVSSFRVQMHVYWVV*PNHESS
Trigger: CGACGACTCGTGGTTGGGCAACACCACCCAGTACAC...GTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACGGGATCTCCAGGACTTaGGTGTTGGAGAGGATGGCC +
Preference number: 5 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHGISRT*VLERMA
Trigger: GGCCATCCTCTCCAACACCAAAGTCCTGGAGATCCC...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGGAGTCCTGCAGGAAGTaGTGGCCAGACAGGACCATC +
Preference number: 5 (lower is better)
Translates to: ACKIAIPICLFTVSSFRVESCRK*WPDRTI
Trigger: GATGGTCCTGTCTGGCCACAACTTCCTGCAGGACTC...CACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp TTTCTTTCCGTGAGTGAGACACAAGAGACGCGATTGTGCCGGAGCGCACGGTACAATCACTTTCTAATGTaGCCGTCTGGTAACCTACAG +
Preference number: 5 (lower is better)
Translates to: FLSVSETQETRLCRSARYNHFLM*PSGNLQ
Trigger: CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATT...GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGTCTCACTCACGGAAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp AAGAGCAGCGACTGGAGCCCCAGACGCAGGTTCCAAAACGGATGCCGGTTATTGGTGGCGTTTTTGGTATaGGTTTTCTTAGATGAAGCA +
Preference number: 5 (lower is better)
Translates to: KSSDWSPRRRFQNGCRLLVAFLV*VFLDEA
Trigger: TGCTTCATCTAAGAAAACCAATACCAAAAACGCCAC...CAATAACCGGCATCCGTTTTGGAACCTGCGTCTGGGGCTCCAGTCGCTGCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GGAGCCCTTTCTCCATCAGCGACGTTCTGTTCAGTGACTTCACAGCCGGAGCCTGTGGCGTTTTTGGTATaGGTTTTCTTAGATGAAGCA +
Preference number: 5 (lower is better)
Translates to: GALSPSATFCSVTSQPEPVAFLV*VFLDEA
Trigger: TGCTTCATCTAAGAAAACCAATACCAAAAACGCCAC...AGGCTCCGGCTGTGAAGTCACTGAACAGAACGTCGCTGATGGAGAAAGGGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp ATCGATGGCTCGGTCTCACTAACGGGACATCACACAGTTAAATGTGCAACACGCGACCCCCTCAGTTTTTaGGAGCAGAAGAGCCATGTT +
Preference number: 5 (lower is better)
Translates to: IDGSVSLTGHHTVKCATRDPLSF*EQKSHV
Trigger: AACATGGCTCTTCTGCTCCAAAAAACTGAGGGGGTC...GCGTGTTGCACATTTAACTGTGTGATGTCCCGTTAGTGAGACCGAGCCATCGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp TTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCTCAGTTTTTGACCCCCTCAGTTTTTaGGAGCAGAAGAGCCATGTT +
Preference number: 5 (lower is better)
Translates to: FTVSSFRVQMHTRTPSVFDPLSF*EQKSHV
Trigger: AACATGGCTCTTCTGCTCCAAAAAACTGAGGGGGTC...AAAAACTGAGGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp GTCGTTTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACTGGAAAAACTGGTTATaGTTGTGGTACAGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: VVSASLEKAPHALMFTAYWKNWL*LWYRPK
Trigger: CTTGGGCCTGTACCACAACAATAACCAGTTTTTCCA...GTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CAA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGGTGGAGGGGGACCGTTaGGAGCTAGGGAGGACGTCT +
Preference number: 5 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLVEGDR*ELGRTS
Trigger: AGACGTCCTCCCTAGCTCCAAACGGTCCCCCTCCAC...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGGTGGTCTTGCGGGACTaGACAGGGACGCCATCTCCC +
Preference number: 5 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLVVLRD*TGTPSP
Trigger: GGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCAC...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp ACAGCTCCTGGCTTTCTAGGGTCCTCCTCGAACTGCGTGAGACGAGAAAATGCAGAAACGTTCCAAATGTaGGAGACTCATACTAGAGTC +
Preference number: 5 (lower is better)
Translates to: TAPGFLGSSSNCVRRENAETFQM*ETHTRV
Trigger: GACTCTAGTATGAGTCTCCAACATTTGGAACGTTTC...TGCATTTTCTCGTCTCACGCAGTTCGAGGAGGACCCTAGAAAGCCAGGAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CAGCTCCTGGCATTCAGTCAGTTGGAGGTTCTGAGTGGTACCAGGTGTGAGTTCTGCTATTCAAGTTACTaGTGCTATGTTCGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: QLLAFSQLEVLSGTRCEFCYSSY*CYVRSQ
Trigger: CTGGCTTCGAACATAGCACAAGTAACTTGAATAGCA...GAACTCACACCTGGTACCACTCAGAACCTCCAACTGACTGAATGCCAGGAGCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GGAGCCTCCACCCGCAGGTGCAATTCAGGCAGGTTCCATAAGGGGGCATTAATTCAGGTTTTTCTGCTTTaGTCCAGTAACCTATTGATG +
Preference number: 5 (lower is better)
Translates to: GASTRRCNSGRFHKGALIQVFLL*SSNLLM
Trigger: CATCAATAGGTTACTGGACAAAAGCAGAAAAACCTG...AATTAATGCCCCCTTATGGAACCTGCCTGAATTGCACCTGCGGGTGGAGGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TTCTGCGTCTTTAGAAAAAGCACCCCACGCGCTCATGTTCACGGCTTACGGTTAAAAAACTGGTTATTGTaGTGGTACAGGCCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: FCVFRKSTPRAHVHGLRLKNWLL*WYRPKH
Trigger: GTGCTTGGGCCTGTACCACAACAATAACCAGTTTTT...TAACCGTAAGCCGTGAACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000587635.5
CDS-3UTR CAA 90 bp GGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTATTTCGGGGTCCGTGGTCTaGGGAGACACGCAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: GLKAKFIPKGACKIAIPISGSVV*GDTQGD
Trigger: GTCTCCCTGCGTGTCTCCCAAGACCACGGACCCCGA...AATAGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp AAAGGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTCTGTACTTCCTCTTGTaGCAAGGGGACGCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: KGACKIAIPICLFTVSSFLYFLL*QGDAGL
Trigger: CAGACCCGCGTCCCCTTGCAACAAGAGGAAGTACAG...AAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAAGGGATCTCCAGGACTTaGGTGTTGGAGAGGATGGCC +
Preference number: 5 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDEGISRT*VLERMA
Trigger: GGCCATCCTCTCCAACACCAAAGTCCTGGAGATCCC...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp AATGCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTAGGGATCTCCAGGACTTaGGTGTTGGAGAGGATGGCC +
Preference number: 5 (lower is better)
Translates to: NAQFYDALMVWLNKALPVGISRT*VLERMA
Trigger: GGCCATCCTCTCCAACACCAAAGTCCTGGAGATCCC...TACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GAGCCAATCTTTGCACATATTAATGTTCAGCTCCTGGCATTCAGTCAGTTGGAGTCACCGGTCCACAGGTaGGAGCAGGCTCATAATCAT +
Preference number: 5 (lower is better)
Translates to: EPIFAHINVQLLAFSQLESPVHR*EQAHNH
Trigger: ATGATTATGAGCCTGCTCCAACCTGTGGACCGGTGA...CTCCAACTGACTGAATGCCAGGAGCTGAACATTAATATGTGCAAAGATTGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CAA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACGGCTGTAGTATGGTCTaGGGAGAGGACTTAACCCCT +
Preference number: 5 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHGCSMV*GEDLTP
Trigger: AGGGGTTAAGTCCTCTCCCAAGACCATACTACAGCC...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GTTATTGCTGACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTACACAATGAAATGTGTTaGCAGTTTCTGCTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: VIADREALLGEDTSALLLHNEMC*QFLLLK
Trigger: TTTTAGGAGCAGAAACTGCAAACACATTTCATTGTG...TAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTCAGCAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACACAGGTTTTTCTGCTTTaGTCCAGTAACCTATTGATG +
Preference number: 5 (lower is better)
Translates to: YVQTDGMAFRLFLSVSETQVFLL*SSNLLM
Trigger: CATCAATAGGTTACTGGACAAAAGCAGAAAAACCTG...TGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACCATGCAACGGATGCCGGTTATaGCTGACAGGGAAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: LIPKARVQVNRVSMNKPCNGCRL*LTGKPS
Trigger: GGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTT...GCATGGTTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGACACAAGAGACGCGATaGTGCCGGAGCGCACGGTAC +
Preference number: 5 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQTQETR*CRSARY
Trigger: GTACCGTGCGCTCCGGCACAATCGCGTCTCTTGTGT...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp ACAGTTAAATGTGCAACACGCCACGCTGCTTTACGGCGACGTCGTTTCTGCGTCAATAGCTATACCTATTaGCCTTTTCACCGTAAGCAG +
Preference number: 5 (lower is better)
Translates to: TVKCATRHAALRRRRFCVNSYTY*PFHRKQ
Trigger: CTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATT...GACGCAGAAACGACGTCGCCGTAAAGCAGCGTGGCGTGTTGCACATTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAATCACCGGTCCACAGGTaGGAGCAGGCTCATAATCAT +
Preference number: 5 (lower is better)
Translates to: GALIPKARVQVNRVSMNKSPVHR*EQAHNH
Trigger: ATGATTATGAGCCTGCTCCAACCTGTGGACCGGTGA...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATTTGGAGAGCCAATCTTaGCACATATTAATGTTCAGC +
Preference number: 5 (lower is better)
Translates to: DREALLGEDTSALLLFIHLESQS*HILMFS
Trigger: GCTGAACATTAATATGTGCAAAGATTGGCTCTCCAA...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCCTGCTTTCCTTCTTGTaGGAGAGCCAATCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTLLSFL*ESQSLH
Trigger: GTGCAAAGATTGGCTCTCCAACAAGAAGGAAAGCAG...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTAGAAACGTTCCAAATGTaGGAGACTCATACTAGAGTC +
Preference number: 5 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLETFQM*ETHTRV
Trigger: GACTCTAGTATGAGTCTCCAACATTTGGAACGTTTC...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
CDS-3UTR CAA 90 bp TACGTGCAGACCGACGGGATGGCCTTCAGGTTGTTTCTTTCCGTGAGTGAGACATTGTCCAGTAACCTATaGATGTGCTATTCAAGTTAC +
Preference number: 5 (lower is better)
Translates to: YVQTDGMAFRLFLSVSETLSSNL*MCYSSY
Trigger: GTAACTTGAATAGCACATCAATAGGTTACTGGACAA...TGTCTCACTCACGGAAAGAAACAACCTGAAGGCCATCCCGTCGGTCTGCACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGAACGGATGCCGGTTATaGCTGACAGGGAAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQNGCRL*LTGKPS
Trigger: GGAGGGCTTCCCTGTCAGCAATAACCGGCATCCGTT...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp AGGTTGCATGTTATTTACAATCACTTTCTAATGTTGCCGTCTGGTAACCTACAGACCAGAGAATTCGGCTaGCACAGGTCCCGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: RLHVIYNHFLMLPSGNLQTREFG*HRSRSV
Trigger: AACTGACCGGGACCTGTGCAAGCCGAATTCTCTGGT...CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATTGTAAATAACATGCAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GACAGGGAAGCCCTCCTGGGCGAGGACACGTCGGCTCTGTTATTATTTATACATTTGTCCAGTAACCTATaGATGTGCTATTCAAGTTAC +
Preference number: 5 (lower is better)
Translates to: DREALLGEDTSALLLFIHLSSNL*MCYSSY
Trigger: GTAACTTGAATAGCACATCAATAGGTTACTGGACAA...ATGTATAAATAATAACAGAGCCGACGTGTCCTCGCCCAGGAGGGCTTCCCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GCAGGAGTGTACGTGACAGCCCAGGAAACGTTCCAAATGTTGGAGACTCATACTCAGGTTTTTCTGCTTTaGTCCAGTAACCTATTGATG +
Preference number: 5 (lower is better)
Translates to: AGVYVTAQETFQMLETHTQVFLL*SSNLLM
Trigger: CATCAATAGGTTACTGGACAAAAGCAGAAAAACCTG...AGTATGAGTCTCCAACATTTGGAACGTTTCCTGGGCTGTCACGTACACTCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTGGAGAGGTCATTTCGTATTAGTGGCGTTTTTGGTATaGGTTTTCTTAGATGAAGCA +
Preference number: 5 (lower is better)
Translates to: SNVATRSGCSCWRGHFVLVAFLV*VFLDEA
Trigger: TGCTTCATCTAAGAAAACCAATACCAAAAACGCCAC...TAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000397790.6
CDS-3UTR CAA 90 bp AACGCAGGGCTGAGCATTAAAGTGGCGTTTTTGGTATTGGTTTTCTTAGATGAAGGGATGGCCTTCAGGTaGTTTCTTTCCGTGAGTGAG +
Preference number: 5 (lower is better)
Translates to: NAGLSIKVAFLVLVFLDEGMAFR*FLSVSE
Trigger: CTCACTCACGGAAAGAAACAACCTGAAGGCCATCCC...TTCATCTAAGAAAACCAATACCAAAAACGCCACTTTAATGCTCAGCCCTGCGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp TTCACCGTAAGCAGCTTTAGGGTGCAAATGCACACCAGGACCCCCTCAGTTTTTAATAGCTATACCTATTaGCCTTTTCACCGTAAGCAG +
Preference number: 5 (lower is better)
Translates to: FTVSSFRVQMHTRTPSVFNSYTY*PFHRKQ
Trigger: CTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATT...AAAAACTGAGGGGGTCCTGGTGTGCATTTGCACCCTAAAGCTGCTTACGGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp GGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGAGGCCTTTCCAGAGCTaGCCTGATAAAAACAAGGAG +
Preference number: 5 (lower is better)
Translates to: GACKIAIPICLFTVSSFRRPFQS*PDKNKE
Trigger: CTCCTTGTTTTTATCAGGCAAGCTCTGGAAAGGCCT...CCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591814.5
CDS-3UTR CAA 90 bp CCAGCAAGGCCTACACAAACCTACCTGTTAACAGTAACTCATCTGAAAACACACAAAAACTGGTTATTGTaGTGGTACAGGCCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: PARPTQTYLLTVTHLKTHKNWLL*WYRPKH
Trigger: GTGCTTGGGCCTGTACCACAACAATAACCAGTTTTT...GTGTGTTTTCAGATGAGTTACTGTTAACAGGTAGGTTTGTGTAGGCCTTGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp GGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGTGGAAAAACTGGTTATaGTTGTGGTACAGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: GACKIAIPICLFTVSSFRWKNWL*LWYRPK
Trigger: CTTGGGCCTGTACCACAACAATAACCAGTTTTTCCA...CCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp GGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTATTTCCAGGACTTTGGTGTaGGAGAGGATGGCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: GLKAKFIPKGACKIAIPISRTLV*ERMASW
Trigger: CCACGAGGCCATCCTCTCCAACACCAAAGTCCTGGA...AATAGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp TGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAATCCACGAAAATGACCTaGGAGTCCTGCAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: CKIAIPICLFTVSSFRVQSTKMT*ESCRKL
Trigger: CAACTTCCTGCAGGACTCCAAGGTCATTTTCGTGGA...TTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGTCACCGGTCCACAGGTaGGAGCAGGCTCATAATCAT +
Preference number: 5 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLSPVHR*EQAHNH
Trigger: ATGATTATGAGCCTGCTCCAACCTGTGGACCGGTGA...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CAA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCAATCACTTTCTAATGTaGCCGTCTGGTAACCTACAG +
Preference number: 5 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTNHFLM*PSGNLQ
Trigger: CTGTAGGTTACCAGACGGCAACATTAGAAAGTGATT...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp ATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAGGGTGCAAATGCACAAAAACTGGTTATTGTaGTGGTACAGGCCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: IAIPICLFTVSSFRVQMHKNWLL*WYRPKH
Trigger: GTGCTTGGGCCTGTACCACAACAATAACCAGTTTTT...GTGCATTTGCACCCTAAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGTCCACGAAAATGACCTaGGAGTCCTGCAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLSTKMT*ESCRKL
Trigger: CAACTTCCTGCAGGACTCCAAGGTCATTTTCGTGGA...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS-3UTR CAA 90 bp AAAGGTGCCTGCAAAATAGCTATACCTATTTGCCTTTTCACCGTAAGCAGCTTTAAAAACTGGTTATTGTaGTGGTACAGGCCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: KGACKIAIPICLFTVSSFKNWLL*WYRPKH
Trigger: GTGCTTGGGCCTGTACCACAACAATAACCAGTTTTT...AAAGCTGCTTACGGTGAAAAGGCAAATAGGTATAGCTATTTTGCAGGCACCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp AATGCTCAATTCTATGATGCCCTGATGGTCTGGTTAAATAAGGCACTTCCAGTATGGAAAAACTGGTTATaGTTGTGGTACAGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: NAQFYDALMVWLNKALPVWKNWL*LWYRPK
Trigger: CTTGGGCCTGTACCACAACAATAACCAGTTTTTCCA...TACTGGAAGTGCCTTATTTAACCAGACCATCAGGGCATCATAGAATTGAGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
CDS-3UTR CAA 90 bp CGTAATAAGCAACTAATTGTACAGAGTGCCCAGCAAGGCCTACACAAACCTACCCACAATGAAATGTGTTaGCAGTTTCTGCTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: RNKQLIVQSAQQGLHKPTHNEMC*QFLLLK
Trigger: TTTTAGGAGCAGAAACTGCAAACACATTTCATTGTG...GGTAGGTTTGTGTAGGCCTTGCTGGGCACTCTGTACAATTAGTTGCTTATTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACAGGTTTTTCTGCTTTaGTCCAGTAACCTATTGATG +
Preference number: 5 (lower is better)
Translates to: GALIPKARVQVNRVSMNKQVFLL*SSNLLM
Trigger: CATCAATAGGTTACTGGACAAAAGCAGAAAAACCTG...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAAGTGGCGTTTTTGGTATaGGTTTTCTTAGATGAAGCA +
Preference number: 5 (lower is better)
Translates to: GALIPKARVQVNRVSMNKVAFLV*VFLDEA
Trigger: TGCTTCATCTAAGAAAACCAATACCAAAAACGCCAC...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GGGGCATTAATTCCTAAGGCACGAGTTCAGGTCAACCGTGTTTCAATGAATAAACACAATGAAATGTGTTaGCAGTTTCTGCTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: GALIPKARVQVNRVSMNKHNEMC*QFLLLK
Trigger: TTTTAGGAGCAGAAACTGCAAACACATTTCATTGTG...TTTATTCATTGAAACACGGTTGACCTGAACTCGTGCCTTAGGAATTAATGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
CDS-3UTR CAA 90 bp GGCTTAAAAGCAAAGTTTATTCCTAAAGGTGCCTGCAAAATAGCTATACCTATTTGGAAAAACTGGTTATaGTTGTGGTACAGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: GLKAKFIPKGACKIAIPIWKNWL*LWYRPK
Trigger: CTTGGGCCTGTACCACAACAATAACCAGTTTTTCCA...AATAGGTATAGCTATTTTGCAGGCACCTTTAGGAATAAACTTTGCTTTTAAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS-3UTR CAA 90 bp GAGGTTCTGAGTGGTACCAGGTGTGAGTTCAGTTTATTTATTCAAAAGTCTTTGTTGGAGAGCCAATCTTaGCACATATTAATGTTCAGC +
Preference number: 5 (lower is better)
Translates to: EVLSGTRCEFSLFIQKSLLESQS*HILMFS
Trigger: GCTGAACATTAATATGTGCAAAGATTGGCTCTCCAA...CAAAGACTTTTGAATAAATAAACTGAACTCACACCTGGTACCACTCAGAACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000397790.6
ENST00000427363.7
ENST00000545796.5
ENST00000590313.5
CDS GCA 72 bp GCGGGCGGAGGCACAGGAGAAGCGGCCGCCCCGCGCTaGCGGGGTCGGGTCTCCGGGAAGACAGCCCTCGCC +
Preference number: 6 (lower is better)
Translates to: AGGGTGEAAAPR*RGRVSGKTALA
Trigger: GGCGAGGGCTGTCTTCCCGGAGACCCGACCCCGGCAGCGCGGGGCGGCCGCTTCTCCTGTGCCTCCGCCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
ENST00000591814.5
CDS GCA 72 bp GGAGGGGCGGGCGAGGGGCCCGTTCACAGCCCAGACTaGGGCGGACACGCTCCGGCCGCCTCGTCTACCTGC +
Preference number: 6 (lower is better)
Translates to: GGAGEGPVHSPD*GGHAPAASSTC
Trigger: GCAGGTAGACGAGGCGGCCGGAGCGTGTCCGCCGCAGTCTGGGCTGTGAACGGGCCCCTCGCCCGCCCCTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590861.1
CDS TCA 72 bp GGGTGGTGTTGCCCAACCACGAGTCGTCGGTCACGCTaGCCCGCGGGGAGCCGTGCGGGGACGGCGTGGGCG +
Preference number: 6 (lower is better)
Translates to: GWCCPTTSRRSR*PAGSRAGTAWA
Trigger: CGCCCACGCCGTCCCCGCACGGCTCCCCGCGGGTCAGCGTGACCGACGACTCGTGGTTGGGCAACACCACCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS GCA 72 bp GCGGGCAGGGTCGGGCTTCCTCCGCTGACTTCATGGTaGCGCCGGCGCGCGGCGCGGGCCCCAAAGTTTCTC +
Preference number: 6 (lower is better)
Translates to: AGRVGLPPLTSW*RRRAARAPKFL
Trigger: GAGAAACTTTGGGGCCCGCGCCGCGCGCCGGCGGCACCATGAAGTCAGCGGAGGAAGCCCGACCCTGCCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397790.6
CDS CCA 72 bp TGCGAGGACTCTCCAGGGCAGGGGCCCCATCAGGCCTaGTGTGGCCGGAGGAGAGGAAGTAGCCCGCGGGCC +
Preference number: 6 (lower is better)
Translates to: CEDSPGQGPHQA*CGRRRGSSPRA
Trigger: GGCCCGCGGGCTACTTCCTCTCCTCCGGCCACACCAGGCCTGATGGGGCCCCTGCCCTGGAGAGTCCTCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS CAA 90 bp CCGCAGGGCCAAGTGGAAACTTGGAAGGGACTGGAAAGCTGGTGCTaGGCATCCGCGCGGCGGCGGCGGGGAGTGGAGCGGCGGGCGGAG +
Preference number: 6 (lower is better)
Translates to: PQGQVETWKGLESWC*ASARRRRGVERRAE
Trigger: CTCCGCCCGCCGCTCCACTCCCCGCCGCCGCCGCGCGGATGCCAAGCACCAGCTTTCCAGTCCCTTCCAAGTTTCCACTTGGCCCTGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
ENST00000587635.5
ENST00000591814.5
CDS TCA 72 bp GGCCCACCGTCCAAAGCTGCTCCGTACCCCGAGGGGTaGTCCGCCGGCGGGATGATGCCCGGTGTGGAGGTC +
Preference number: 6 (lower is better)
Translates to: GPPSKAAPYPEG*SAGGMMPGVEV
Trigger: GACCTCCACACCGGGCATCATCCCGCCGGCGGATCACCCCTCGGGGTACGGAGCAGCTTTGGACGGTGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS GCA 72 bp GGAGAGGAAGTAGCCCGCGGGCCCACCGTCCAAAGCTaGTCCGTACCCCGAGGGGTGATCCGCCGGCGGGAT +
Preference number: 6 (lower is better)
Translates to: GEEVARGPTVQS*SVPRGVIRRRD
Trigger: ATCCCGCCGGCGGATCACCCCTCGGGGTACGGAGCAGCTTTGGACGGTGGGCCCGCGGGCTACTTCCTCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS CAA 90 bp GCGTTGATGGCGGCCACGATGGCCGAGCTGGTGTACTGGGTGGTGTaGCCCAACCACGAGTCGTCGGTCACGCTGACCCGCGGGGAGCCG +
Preference number: 6 (lower is better)
Translates to: ALMAATMAELVYWVV*PNHESSVTLTRGEP
Trigger: CGGCTCCCCGCGGGTCAGCGTGACCGACGACTCGTGGTTGGGCAACACCACCCAGTACACCAGCTCGGCCATCGTGGCCGCCATCAACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS TCA 72 bp CAGGTCCTCCCCGACGGGCTCCACCTTGAGCGCCACTaGGGGCGGCTGCTCCAGGGTGGTCTTGCGGGACTT +
Preference number: 6 (lower is better)
Translates to: QVLPDGLHLERH*GRLLQGGLAGL
Trigger: AAGTCCCGCAAGACCACCCTGGAGCAGCCGCCCTCAGTGGCGCTCAAGGTGGAGCCCGTCGGGGAGGACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS TCA 72 bp ACCGCCCTCGTCCGTAGCACGGTACCAGCACGTCTCTaGCGGCCAAAGTGCAGGTGCCAGGTGCCGGCCGCG +
Preference number: 6 (lower is better)
Translates to: TALVRSTVPARL*RPKCRCQVPAA
Trigger: CGCGGCCGGCACCTGGCACCTGCACTTTGGCCGTCAGAGACGTGCTGGTACCGTGCTACGGACGAGGGCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586695.1
CDS TCA 72 bp CCTGGCTGCCTCGGCAGAGAGCTGGGGTCGCCAGAGTaGCCGCCCTCGTCCGTAGCACGGTACCAGCACGTC +
Preference number: 6 (lower is better)
Translates to: PGCLGRELGSPE*PPSSVARYQHV
Trigger: GACGTGCTGGTACCGTGCTACGGACGAGGGCGGTCACTCTGGCGACCCCAGCTCTCTGCCGAGGCAGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586695.1
CDS GCA 72 bp CCGACGGGCTCCACCTTGAGCGCCACTGAGGGCGGCTaGTCCAGGGTGGTCTTGCGGGACTTGACAGGGACG +
Preference number: 6 (lower is better)
Translates to: PTGSTLSATEGG*SRVVLRDLTGT
Trigger: CGTCCCTGTCAAGTCCCGCAAGACCACCCTGGAGCAGCCGCCCTCAGTGGCGCTCAAGGTGGAGCCCGTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS GCA 72 bp ATCCGAAGCTCATACGGGCCTGAGTGGGACGGCAGCTaGCAGTCCAGGGCGGGCAGGGTCGGGCTTCCTCCG +
Preference number: 6 (lower is better)
Translates to: IRSSYGPEWDGS*QSRAGRVGLPP
Trigger: CGGAGGAAGCCCGACCCTGCCCGCCCTGGACTGGCAGCTGCCGTCCCACTCAGGCCCGTATGAGCTTCGGAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397790.6
CDS GCA 72 bp CAGACCGCCGGGAGTCACCGGAACGCAGAGAAAACCTaGGGCGGGTTCGAGGCCTGTGTCCCCCTGCCCTGC +
Preference number: 6 (lower is better)
Translates to: QTAGSHRNAEKT*GGFEACVPLPC
Trigger: GCAGGGCAGGGGGACACAGGCCTCGAACCCGCCGCAGGTTTTCTCTGCGTTCCGGTGACTCCCGGCGGTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591065.1
CDS GCA 72 bp CACAGCCGGATGCAGACACGGGCCACGCAGAGCCTCTaGTCCGTGCCACACCCCATAAGCCCCGTCCCGGTG +
Preference number: 6 (lower is better)
Translates to: HSRMQTRATQSL*SVPHPISPVPV
Trigger: CACCGGGACGGGGCTTATGGGGTGTGGCACGGAGCAGAGGCTCTGCGTGGCCCGTGTCTGCATCCGGCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591089.1
CDS CCA 72 bp GGCTCAGGCACGAGGGGTCTCTGTAGGCCTCCAGGCTaGGCAGACTCAGCGTGGCCGTGGAGGGGGACCGTT +
Preference number: 6 (lower is better)
Translates to: GSGTRGLCRPPG*ADSAWPWRGTV
Trigger: AACGGTCCCCCTCCACGGCCACGCTGAGTCTGCCCAGCCTGGAGGCCTACAGAGACCCCTCGTGCCTGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS CCA 72 bp GCCCGCGGGGAAAGCCCTCCTCGGGGTCCGTGGTCTTaGGAGACACGCAGGGAGACTGCCATGGCGACGTCT +
Preference number: 6 (lower is better)
Translates to: ARGESPPRGPWS*ETRRETAMATS
Trigger: AGACGTCGCCATGGCAGTCTCCCTGCGTGTCTCCCAAGACCACGGACCCCGAGGAGGGCTTTCCCCGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS CAA 72 bp GGCGGCTGCCGGCCGTTGAGGCTGTACTTCCTCTTGTaGCAAGGGGACGCGGGTCTGGAGGAGCGGGCACCC +
Preference number: 6 (lower is better)
Translates to: GGCRPLRLYFLL*QGDAGLEERAP
Trigger: GGGTGCCCGCTCCTCCAGACCCGCGTCCCCTTGCAACAAGAGGAAGTACAGCCTCAACGGCCGGCAGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS CAA 90 bp GGCTCCACCTTGAGCGCCACTGAGGGCGGCTGCTCCAGGGTGGTCTaGCGGGACTTGACAGGGACGCCATCTCCCAGGTCCAGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GSTLSATEGGCSRVV*RDLTGTPSPRSRLL
Trigger: CAGCAGCCTGGACCTGGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCACCCTGGAGCAGCCGCCCTCAGTGGCGCTCAAGGTGGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS TCA 72 bp CTGCTCCGTACCCCGAGGGGTGATCCGCCGGCGGGATaGTGCCCGGTGTGGAGGTCTGAAGGTTGTGGCACG +
Preference number: 6 (lower is better)
Translates to: LLRTPRGDPPAG*CPVWRSEGCGT
Trigger: CGTGCCACAACCTTCAGACCTCCACACCGGGCATCATCCCGCCGGCGGATCACCCCTCGGGGTACGGAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS GCA 72 bp AGGAGGCCTCTGAGTTGCAGCTCCGGGAGGACAGGCTaGTGGCCGGGCTCAGGCACGAGGGGTCTCTGTAGG +
Preference number: 6 (lower is better)
Translates to: RRPLSCSSGRTG*WPGSGTRGLCR
Trigger: CCTACAGAGACCCCTCGTGCCTGAGCCCGGCCAGCAGCCTGTCCTCCCGGAGCTGCAACTCAGAGGCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS CCA 72 bp CGCAGCCGCAGGGCCAAGTGGAAACTTGGAAGGGACTaGAAAGCTGGTGCTTGGCATCCGCGCGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: RSRRAKWKLGRD*KAGAWHPRGGG
Trigger: GCCGCCGCCGCGCGGATGCCAAGCACCAGCTTTCCAGTCCCTTCCAAGTTTCCACTTGGCCCTGCGGCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253506.9
ENST00000397790.6
ENST00000427363.7
ENST00000587635.5
ENST00000591814.5
CDS CCA 72 bp CACCCCATAAGCCCCGTCCCGGTGACCGTGCACAGGTaGGTCCTGCTCCACCGACTGGGAACCGGTTCCCAC +
Preference number: 6 (lower is better)
Translates to: HPISPVPVTVHR*VLLHRLGTGSH
Trigger: GTGGGAACCGGTTCCCAGTCGGTGGAGCAGGACCCACCTGTGCACGGTCACCGGGACGGGGCTTATGGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591089.1
CDS CAA 72 bp GCGGCCACGATGGCCGAGCTGGTGTACTGGGTGGTGTaGCCCAACCACGAGTCGTCGGTCACGCTGACCCGC +
Preference number: 6 (lower is better)
Translates to: AATMAELVYWVV*PNHESSVTLTR
Trigger: GCGGGTCAGCGTGACCGACGACTCGTGGTTGGGCAACACCACCCAGTACACCAGCTCGGCCATCGTGGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS CAA 90 bp GGGACGCCATCTCCCAGGTCCAGGCTGCTGTCGGTGGTCAGCGCGTaGATGGCGGCCACGATGGCCGAGCTGGTGTACTGGGTGGTGTTG +
Preference number: 6 (lower is better)
Translates to: GTPSPRSRLLSVVSA*MAATMAELVYWVVL
Trigger: CAACACCACCCAGTACACCAGCTCGGCCATCGTGGCCGCCATCAACGCGCTGACCACCGACAGCAGCCTGGACCTGGGAGATGGCGTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS CAA 90 bp TTGAGCGCCACTGAGGGCGGCTGCTCCAGGGTGGTCTTGCGGGACTaGACAGGGACGCCATCTCCCAGGTCCAGGCTGCTGTCGGTGGTC +
Preference number: 6 (lower is better)
Translates to: LSATEGGCSRVVLRD*TGTPSPRSRLLSVV
Trigger: GACCACCGACAGCAGCCTGGACCTGGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCACCCTGGAGCAGCCGCCCTCAGTGGCGCTCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS TCA 72 bp GCGAGTGGTGGGGTGAGTAGGGCGGCTGCCGGCCGTTaGGGCTGTACTTCCTCTTGTTGCAAGGGGACGCGG +
Preference number: 6 (lower is better)
Translates to: ASGGVSRAAAGR*GCTSSCCKGTR
Trigger: CCGCGTCCCCTTGCAACAAGAGGAAGTACAGCCTCAACGGCCGGCAGCCGCCCTACTCACCCCACCACTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS TCA 72 bp CTGAGGGCGGCTGCTCCAGGGTGGTCTTGCGGGACTTaGCAGGGACGCCATCTCCCAGGTCCAGGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: LRAAAPGWSCGT*QGRHLPGPGCC
Trigger: ACAGCAGCCTGGACCTGGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCACCCTGGAGCAGCCGCCCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS GCA 72 bp GTCCGCTGCTCCATCCATCACGCGGTAGCCGCCGTCTaGGACGGTAACGACGTTGGATGGCGGCACACAGGC +
Preference number: 6 (lower is better)
Translates to: VRCSIHHAVAAV*DGNDVGWRHTG
Trigger: GCCTGTGTGCCGCCATCCAACGTCGTTACCGTCGCAGACGGCGGCTACCGCGTGATGGATGGAGCAGCGGAC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590861.1
CDS CAA 72 bp TCTCCCAGGTCCAGGCTGCTGTCGGTGGTCAGCGCGTaGATGGCGGCCACGATGGCCGAGCTGGTGTACTGG +
Preference number: 6 (lower is better)
Translates to: SPRSRLLSVVSA*MAATMAELVYW
Trigger: CCAGTACACCAGCTCGGCCATCGTGGCCGCCATCAACGCGCTGACCACCGACAGCAGCCTGGACCTGGGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS CAA 72 bp TTGAGCGCCACTGAGGGCGGCTGCTCCAGGGTGGTCTaGCGGGACTTGACAGGGACGCCATCTCCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: LSATEGGCSRVV*RDLTGTPSPRS
Trigger: GGACCTGGGAGATGGCGTCCCTGTCAAGTCCCGCAAGACCACCCTGGAGCAGCCGCCCTCAGTGGCGCTCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS GCA 72 bp TGCAGGTGCCAGGTGCCGGCCGCGATGCTGGGAAGATaGTGTGGCTGTCTCTCCACGAACCAAGCGACCCAC +
Preference number: 6 (lower is better)
Translates to: CRCQVPAAMLGR*CGCLSTNQATH
Trigger: GTGGGTCGCTTGGTTCGTGGAGAGACAGCCACAGCATCTTCCCAGCATCGCGGCCGGCACCTGGCACCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586695.1
CDS GCA 72 bp GACGGCCAAAGTGCAGGTGCCAGGTGCCGGCCGCGATaGTGGGAAGATGCTGTGGCTGTCTCTCCACGAACC +
Preference number: 6 (lower is better)
Translates to: DGQSAGARCRPR*WEDAVAVSPRT
Trigger: GGTTCGTGGAGAGACAGCCACAGCATCTTCCCAGCATCGCGGCCGGCACCTGGCACCTGCACTTTGGCCGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586695.1
CDS CCA 72 bp GCGTTGATGGCGGCCACGATGGCCGAGCTGGTGTACTaGGTGGTGTTGCCCAACCACGAGTCGTCGGTCACG +
Preference number: 6 (lower is better)
Translates to: ALMAATMAELVY*VVLPNHESSVT
Trigger: CGTGACCGACGACTCGTGGTTGGGCAACACCACCCAGTACACCAGCTCGGCCATCGTGGCCGCCATCAACGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS CCA 72 bp GTGCCAGGTGCCGGCCGCGATGCTGGGAAGATGCTGTaGCTGTCTCTCCACGAACCAAGCGACCCACAGGTC +
Preference number: 6 (lower is better)
Translates to: VPGAGRDAGKML*LSLHEPSDPQV
Trigger: GACCTGTGGGTCGCTTGGTTCGTGGAGAGACAGCCACAGCATCTTCCCAGCATCGCGGCCGGCACCTGGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586695.1
CDS CAA 72 bp CTGGGCAGACTCAGCGTGGCCGTGGAGGGGGACCGTTaGGAGCTAGGGAGGACGTCTTCCACCTCCACATCG +
Preference number: 6 (lower is better)
Translates to: LGRLSVAVEGDR*ELGRTSSTSTS
Trigger: CGATGTGGAGGTGGAAGACGTCCTCCCTAGCTCCAAACGGTCCCCCTCCACGGCCACGCTGAGTCTGCCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS GCA 72 bp CATAGCCATAGTGTTCTTCCTCCGCTGACTTCATGGTaGCGCCGGCGCGCGGCGCGGGCCCCAAAGTTTCTC +
Preference number: 6 (lower is better)
Translates to: HSHSVLPPLTSW*RRRAARAPKFL
Trigger: GAGAAACTTTGGGGCCCGCGCCGCGCGCCGGCGGCACCATGAAGTCAGCGGAGGAAGAACACTATGGCTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253506.9
ENST00000427363.7
ENST00000542384.5
ENST00000587635.5
ENST00000591814.5
CDS CCA 72 bp GGCCAAAGTGCAGGTGCCAGGTGCCGGCCGCGATGCTaGGAAGATGCTGTGGCTGTCTCTCCACGAACCAAG +
Preference number: 6 (lower is better)
Translates to: GQSAGARCRPRC*EDAVAVSPRTK
Trigger: CTTGGTTCGTGGAGAGACAGCCACAGCATCTTCCCAGCATCGCGGCCGGCACCTGGCACCTGCACTTTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586695.1
CDS CAA 90 bp GCCTCCAGGCTGGGCAGACTCAGCGTGGCCGTGGAGGGGGACCGTTaGGAGCTAGGGAGGACGTCTTCCACCTCCACATCGTGGAAAAAC +
Preference number: 6 (lower is better)
Translates to: ASRLGRLSVAVEGDR*ELGRTSSTSTSWKN
Trigger: GTTTTTCCACGATGTGGAGGTGGAAGACGTCCTCCCTAGCTCCAAACGGTCCCCCTCCACGGCCACGCTGAGTCTGCCCAGCCTGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS TCA 72 bp TTAACCTGGAACCGGGCAGCGCGCAGCTCCCACTCCTaGTCAGGGGACGCCACACTGCGTTTGCACACACAC +
Preference number: 6 (lower is better)
Translates to: LTWNRAARSSHS*SGDATLRLHTH
Trigger: GTGTGTGTGCAAACGCAGTGTGGCGTCCCCTGATCAGGAGTGGGAGCTGCGCGCTGCCCGGTTCCAGGTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590224.5
CDS GCA 72 bp TGTTGTGGTACAGGCCCAAGCACGAGGTTATCTCGATaGGAGGACTCTCCAGGGCAGGGGCCCCATCAGGCC +
Preference number: 6 (lower is better)
Translates to: CCGTGPSTRLSR*EDSPGQGPHQA
Trigger: GGCCTGATGGGGCCCCTGCCCTGGAGAGTCCTCGCATCGAGATAACCTCGTGCTTGGGCCTGTACCACAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS GCA 72 bp GCCCGTGGGCTCCCTGAGTATCAGCAGCGATGTGAGTaGAGTGGCCCCGGCGGCCCCAGAAATAAACATCCA +
Preference number: 6 (lower is better)
Translates to: ARGLPEYQQRCE*SGPGGPRNKHP
Trigger: TGGATGTTTATTTCTGGGGCCGCCGGGGCCACTGCACTCACATCGCTGCTGATACTCAGGGAGCCCACGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591089.1
CDS CCA 72 bp GCGGTAGCCGCCGTCTGCGACGGTAACGACGTTGGATaGCGGCACACAGGCTCTTTCAATCATCCTCAGCCG +
Preference number: 6 (lower is better)
Translates to: AVAAVCDGNDVG*RHTGSFNHPQP
Trigger: CGGCTGAGGATGATTGAAAGAGCCTGTGTGCCGCCATCCAACGTCGTTACCGTCGCAGACGGCGGCTACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590861.1
CDS CCA 72 bp AACCAAGCGACCCACAGGTCCACACCAGCACTTCTGTaGTGTCAGCACCAGTGTCGCCTGAGCCTCCCTCTC +
Preference number: 6 (lower is better)
Translates to: NQATHRSTPALL*CQHQCRLSLPL
Trigger: GAGAGGGAGGCTCAGGCGACACTGGTGCTGACACCACAGAAGTGCTGGTGTGGACCTGTGGGTCGCTTGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586695.1
CDS GCA 72 bp AGTAGCCATGCAGCTGGCGAGAGAACAGAAAACACCTaGTCAGCACCCAGAGCACAGACCGCCGGGAGTCAC +
Preference number: 6 (lower is better)
Translates to: SSHAAGERTENT*SAPRAQTAGSH
Trigger: GTGACTCCCGGCGGTCTGTGCTCTGGGTGCTGAGCAGGTGTTTTCTGTTCTCTCGCCAGCTGCATGGCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591065.1
CDS CCA 72 bp CCCAGGCCGCAGATGGCCCCTGGTGAAGAGCATACCTaGGGCTTTCTCCACGAAAATGACCTTGGAGTCCTG +
Preference number: 6 (lower is better)
Translates to: PRPQMAPGEEHT*GFLHENDLGVL
Trigger: CAGGACTCCAAGGTCATTTTCGTGGAGAAAGCCCCAGGTATGCTCTTCACCAGGGGCCATCTGCGGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591089.1
CDS GCA 72 bp GCAACACGCCACGCTGCTTTACGGCGACGTCGTTTCTaGGTCTTTAGAAAAAGCACCCCACGCGCTCATGTT +
Preference number: 6 (lower is better)
Translates to: ATRHAALRRRRF*VFRKSTPRAHV
Trigger: AACATGAGCGCGTGGGGTGCTTTTTCTAAAGACGCAGAAACGACGTCGCCGTAAAGCAGCGTGGCGTGTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591814.5
ENST00000592223.5
CDS CAA 90 bp GGGAGGACGTCTTCCACCTCCACATCGTGGAAAAACTGGTTATTGTaGTGGTACAGGCCCAAGCACGAGGTTATCTCGATGCGAGGACTC +
Preference number: 6 (lower is better)
Translates to: GRTSSTSTSWKNWLL*WYRPKHEVISMRGL
Trigger: GAGTCCTCGCATCGAGATAACCTCGTGCTTGGGCCTGTACCACAACAATAACCAGTTTTTCCACGATGTGGAGGTGGAAGACGTCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS CCA 72 bp GGGAGGACGTCTTCCACCTCCACATCGTGGAAAAACTaGTTATTGTTGTGGTACAGGCCCAAGCACGAGGTT +
Preference number: 6 (lower is better)
Translates to: GRTSSTSTSWKN*LLLWYRPKHEV
Trigger: AACCTCGTGCTTGGGCCTGTACCACAACAATAACCAGTTTTTCCACGATGTGGAGGTGGAAGACGTCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS CCA 72 bp GTATTATTTCATTTAATTTCCTCCTCGGTCCCACCCTaGTCCATGAGTGTCGTGAGCCAGTGCCTGGCTGCC +
Preference number: 6 (lower is better)
Translates to: VLFHLISSSVPP*SMSVVSQCLAA
Trigger: GGCAGCCAGGCACTGGCTCACGACACTCATGGACCAGGGTGGGACCGAGGAGGAAATTAAATGAAATAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586695.1
CDS CAA 90 bp CTAGGGAGGACGTCTTCCACCTCCACATCGTGGAAAAACTGGTTATaGTTGTGGTACAGGCCCAAGCACGAGGTTATCTCGATGCGAGGA +
Preference number: 6 (lower is better)
Translates to: LGRTSSTSTSWKNWL*LWYRPKHEVISMRG
Trigger: TCCTCGCATCGAGATAACCTCGTGCTTGGGCCTGTACCACAACAATAACCAGTTTTTCCACGATGTGGAGGTGGAAGACGTCCTCCCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS TCA 72 bp TATTATTTCATTTACCCGATGAATGATTTGCACGGCTaGGTCCGCTGCTCCATCCATCACGCGGTAGCCGCC +
Preference number: 6 (lower is better)
Translates to: YYFIYPMNDLHG*VRCSIHHAVAA
Trigger: GGCGGCTACCGCGTGATGGATGGAGCAGCGGACTCAGCCGTGCAAATCATTCATCGGGTAAATGAAATAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590861.1
CDS CCA 72 bp TTGGAGCTAGGGAGGACGTCTTCCACCTCCACATCGTaGAAAAACTGGTTATTGTTGTGGTACAGGCCCAAG +
Preference number: 6 (lower is better)
Translates to: LELGRTSSTSTS*KNWLLLWYRPK
Trigger: CTTGGGCCTGTACCACAACAATAACCAGTTTTTCCACGATGTGGAGGTGGAAGACGTCCTCCCTAGCTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS CCA 72 bp TCCACCTCCACATCGTGGAAAAACTGGTTATTGTTGTaGTACAGGCCCAAGCACGAGGTTATCTCGATGCGA +
Preference number: 6 (lower is better)
Translates to: STSTSWKNWLLL*YRPKHEVISMR
Trigger: TCGCATCGAGATAACCTCGTGCTTGGGCCTGTACCACAACAATAACCAGTTTTTCCACGATGTGGAGGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS CAA 72 bp ACGTCTTCCACCTCCACATCGTGGAAAAACTGGTTATaGTTGTGGTACAGGCCCAAGCACGAGGTTATCTCG +
Preference number: 6 (lower is better)
Translates to: TSSTSTSWKNWL*LWYRPKHEVIS
Trigger: CGAGATAACCTCGTGCTTGGGCCTGTACCACAACAATAACCAGTTTTTCCACGATGTGGAGGTGGAAGACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS GCA 72 bp GAGTGCTCCAATGTGGCAACTAGGAGTGGGTGCTCGTaGTGGAGAGGTCATTTCGTATTATTTCATTTACCC +
Preference number: 6 (lower is better)
Translates to: ECSNVATRSGCS*WRGHFVLFHLP
Trigger: GGGTAAATGAAATAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGAGCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590861.1
CDS CAA 72 bp TCTTCCACCTCCACATCGTGGAAAAACTGGTTATTGTaGTGGTACAGGCCCAAGCACGAGGTTATCTCGATG +
Preference number: 6 (lower is better)
Translates to: SSTSTSWKNWLL*WYRPKHEVISM
Trigger: CATCGAGATAACCTCGTGCTTGGGCCTGTACCACAACAATAACCAGTTTTTCCACGATGTGGAGGTGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000253506.9
ENST00000318065.9
ENST00000329101.8
ENST00000427363.7
ENST00000542384.5
ENST00000586434.1
ENST00000587635.5
ENST00000591814.5
ENST00000592223.5
CDS GCA 72 bp GAGTGCTCCAATGTGGCAACTAGGAGTGGGTGCTCGTaGTGGAGAGGTCATTTCGTATTATTTCATTTACAG +
Preference number: 6 (lower is better)
Translates to: ECSNVATRSGCS*WRGHFVLFHLQ
Trigger: CTGTAAATGAAATAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGAGCACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590172.1
CDS CCA 72 bp TGCTCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTaGAGAGGTCATTTCGTATTATTTCATTTACAGCTC +
Preference number: 6 (lower is better)
Translates to: CSNVATRSGCSC*RGHFVLFHLQL
Trigger: GAGCTGTAAATGAAATAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590172.1
CDS GCA 72 bp GAGTGCTCCAATGTGGCAACTAGGAGTGGGTGCTCGTaGTGGAGAGGTCATTTCGTATTATTTCATTTAATT +
Preference number: 6 (lower is better)
Translates to: ECSNVATRSGCS*WRGHFVLFHLI
Trigger: AATTAAATGAAATAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGAGCACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586695.1
CDS CCA 72 bp TGCTCCAATGTGGCAACTAGGAGTGGGTGCTCGTGCTaGAGAGGTCATTTCGTATTATTTCATTTAATTTCC +
Preference number: 6 (lower is better)
Translates to: CSNVATRSGCSC*RGHFVLFHLIS
Trigger: GGAAATTAAATGAAATAATACGAAATGACCTCTCCAGCACGAGCACCCACTCCTAGTTGCCACATTGGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586695.1