RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NFASC (Homo sapiens)

Ensembl gene IDs: ENSG00000163531

Ensembl transcript IDs: ENST00000339876.11, ENST00000360049.8, ENST00000367173.7, ENST00000401399.5, ENST00000403080.5, ENST00000404076.5, ENST00000404907.5, ENST00000404977.6, ENST00000413225.5, ENST00000425360.5, ENST00000430393.6, ENST00000430393.7, ENST00000447819.1, ENST00000468328.5, ENST00000471392.1, ENST00000492085.1, ENST00000493914.5, ENST00000495396.5, ENST00000503221.1, ENST00000504149.1, ENST00000504476.5, ENST00000505079.5, ENST00000512826.5, ENST00000513543.5, ENST00000513543.6, ENST00000514644.5, ENST00000539706.5, ENST00000539706.6, ENST00000680427.1

Found 3057 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAGCTaGGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGG +
Preference number: 1 (lower is better)
Translates to: SGWLRDRARGQAPSS*AQPRLQLSHTGGTR
Trigger: CCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR GCA 90 bp ACGGTGAGTTTCAGGGAGGGGTCGTGCTTCACCCGACACTCCAGCTaGACCGTGGTGCCCCTTCTGGCCACCTGGTCCTCGGGCATCCGG +
Preference number: 1 (lower is better)
Translates to: TVSFREGSCFTRHSS*TVVPLLATWSSGIR
Trigger: CCGGATGCCCGAGGACCAGGTGGCCAGAAGGGGCACCACGGTGCAGCTGGAGTGTCGGGTGAAGCACGACCCCTCCCTGAAACTCACCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR GCA 90 bp CCAGGCCCCCTGGCTGGCAGCCGGAGAGGCTCAAATCGGAGGCTGTaGCCATGGCAGCTGATCCATTCCTGGGGATCAGCTTCACCCTCC +
Preference number: 1 (lower is better)
Translates to: PGPLAGSRRGSNRRL*PWQLIHSWGSASPS
Trigger: GGAGGGTGAAGCTGATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTCCGGCTGCCAGCCAGGGGGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR GCA 90 bp AAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTaGCCTCGGAACTGCCCCGGGCCACTGCTTCTCTGGCTGCTGGGG +
Preference number: 1 (lower is better)
Translates to: KKRSPRLTRPLDCRH*PRNCPGPLLLWLLG
Trigger: CCCCAGCAGCCAGAGAAGCAGTGGCCCGGGGCAGTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
3UTR CCA 90 bp GGTCGTGCTTCACCCGACACTCCAGCTGCACCGTGGTGCCCCTTCTaGCCACCTGGTCCTCGGGCATCCGGTAGATCCTGGTGGGGTCTT +
Preference number: 1 (lower is better)
Translates to: GRASPDTPAAPWCPF*PPGPRASGRSWWGL
Trigger: AAGACCCCACCAGGATCTACCGGATGCCCGAGGACCAGGTGGCCAGAAGGGGCACCACGGTGCAGCTGGAGTGTCGGGTGAAGCACGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR CCA 90 bp GTTTCAGGGAGGGGTCGTGCTTCACCCGACACTCCAGCTGCACCGTaGTGCCCCTTCTGGCCACCTGGTCCTCGGGCATCCGGTAGATCC +
Preference number: 1 (lower is better)
Translates to: VSGRGRASPDTPAAP*CPFWPPGPRASGRS
Trigger: GGATCTACCGGATGCCCGAGGACCAGGTGGCCAGAAGGGGCACCACGGTGCAGCTGGAGTGTCGGGTGAAGCACGACCCCTCCCTGAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR GCA 90 bp TGTCATGAGTGGGGAGCGGTGCCTTGTGCCGGCCTCCCAGGAACCTaGTGGCCACTGAGAAGGGATTCTCTGGCACTAGCCCCAGCCGAC +
Preference number: 1 (lower is better)
Translates to: CHEWGAVPCAGLPGT*WPLRRDSLALAPAD
Trigger: GTCGGCTGGGGCTAGTGCCAGAGAATCCCTTCTCAGTGGCCAGCAGGTTCCTGGGAGGCCGGCACAAGGCACCGCTCCCCACTCATGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp AGTGGTGACTGGGCAGGAGGTCACTCTGCACCAAGGTGTCATGAGTaGGGAGCGGTGCCTTGTGCCGGCCTCCCAGGAACCTGCTGGCCA +
Preference number: 1 (lower is better)
Translates to: SGDWAGGHSAPRCHE*GAVPCAGLPGTCWP
Trigger: TGGCCAGCAGGTTCCTGGGAGGCCGGCACAAGGCACCGCTCCCCACTCATGACACCTTGGTGCAGAGTGACCTCCTGCCCAGTCACCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 90 bp CATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTaGCCTCTACTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATC +
Preference number: 1 (lower is better)
Translates to: HLLEGGSMGPGHVDR*PLLWTGWVWPSIYI
Trigger: GATGTAGATAGAGGGCCACACCCACCCTGTCCAGAGTAGAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR GCA 90 bp TCGTCATCCTTCAGCCAGGAGACGGTGAGTTTCAGGGAGGGGTCGTaGTTCACCCGACACTCCAGCTGCACCGTGGTGCCCCTTCTGGCC +
Preference number: 1 (lower is better)
Translates to: SSSFSQETVSFREGS*FTRHSSCTVVPLLA
Trigger: GGCCAGAAGGGGCACCACGGTGCAGCTGGAGTGTCGGGTGAAGCACGACCCCTCCCTGAAACTCACCGTCTCCTGGCTGAAGGATGACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR CCA 90 bp GGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCTACTCTaGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACC +
Preference number: 1 (lower is better)
Translates to: GGSMGPGHVDRCPLL*TGWVWPSIYILGFT
Trigger: GGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAGTAGAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR TCA 90 bp CCCAGAGCCCACCTGCGTCCTGGCGCTGAGGGTAAAGCGGTAGCGTaGCACGGGGTCCGTTCTTTGCACCGTGAACTTGGTCTGATTGGG +
Preference number: 1 (lower is better)
Translates to: PRAHLRPGAEGKAVA*HGVRSLHRELGLIG
Trigger: CCCAATCAGACCAAGTTCACGGTGCAAAGAACGGACCCCGTGTCACGCTACCGCTTTACCCTCAGCGCCAGGACGCAGGTGGGCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR GCA 90 bp CAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCTCTCTaGACCCTGTGGCCATGGGCAGAATGGACCGAGATGCCCTCACTT +
Preference number: 1 (lower is better)
Translates to: QQIPGWQLAWALLPL*TLWPWAEWTEMPSL
Trigger: AAGTGAGGGCATCTCGGTCCATTCTGCCCATGGCCACAGGGTGCAGAGAGGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 90 bp TGGCCAGGTCTTGGTCTAGCTCGGTGCTGGCGACACACGTGTAACTaGCCTGGTCCCGCTCTGCCACCCCAAAGATGGTCAGGGAGTCGT +
Preference number: 1 (lower is better)
Translates to: WPGLGLARCWRHTCN*PGPALPPQRWSGSR
Trigger: ACGACTCCCTGACCATCTTTGGGGTGGCAGAGCGGGACCAGGGCAGTTACACGTGTGTCGCCAGCACCGAGCTAGACCAAGACCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR CCA 90 bp TCACCATCACCCAGGCAAGGTGGGAGGCAGCTGTCCCCTGACCGATaGCAGTGTACTTCCCGAACCCTGGCCTCGACAATCCTTCAGGGG +
Preference number: 1 (lower is better)
Translates to: SPSPRQGGRQLSPDR*QCTSRTLASTILQG
Trigger: CCCCTGAAGGATTGTCGAGGCCAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTCCCACCTTGCCTGGGTGATGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp GTGGTCACCTCTCCCGACTTCAGGGCTTGCCAGGGGCAGGGGCAATaGGGTGGACCAGATGTCTCCAACCTCTCAGAGCACAAAGGAGGG +
Preference number: 1 (lower is better)
Translates to: VVTSPDFRACQGQGQ*GGPDVSNLSEHKGG
Trigger: CCCTCCTTTGTGCTCTGAGAGGTTGGAGACATCTGGTCCACCCCATTGCCCCTGCCCCTGGCAAGCCCTGAAGTCGGGAGAGGTGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp GGAAGAGGCGGGACACCACGCCACGGAGGCGGTCACCAGGGAAGCTaGCTTGCTGTCTCTTCTGAGACACCCACAGGTTCTTCAGCAAGC +
Preference number: 1 (lower is better)
Translates to: GRGGTPRHGGGHQGS*LAVSSETPTGSSAS
Trigger: GCTTGCTGAAGAACCTGTGGGTGTCTCAGAAGAGACAGCAAGCCAGCTTCCCTGGTGACCGCCTCCGTGGCGTGGTGTCCCGCCTCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR TCA 90 bp GTCCCATTCACCATCACCCAGGCAAGGTGGGAGGCAGCTGTCCCCTaGCCGATGGCAGTGTACTTCCCGAACCCTGGCCTCGACAATCCT +
Preference number: 1 (lower is better)
Translates to: VPFTITQARWEAAVP*PMAVYFPNPGLDNP
Trigger: AGGATTGTCGAGGCCAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTCCCACCTTGCCTGGGTGATGGTGAATGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp ATGGGCCCTGGCCACGTGGACAGGTGCCCTCTACTCTGGACAGGGTaGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAG +
Preference number: 1 (lower is better)
Translates to: MGPGHVDRCPLLWTG*VWPSIYILGFTSEE
Trigger: CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAGTAGAGGGCACCTGTCCACGTGGCCAGGGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CCA 90 bp AGCATGCGTGGGCACTGGGTGTGGCAGGGGAGCTTGTCCGTTAGCTaGGAAACCCACACATCCTCGGGTTTCCACCGTCTTCCCAAGGCT +
Preference number: 1 (lower is better)
Translates to: SMRGHWVWQGSLSVS*ETHTSSGFHRLPKA
Trigger: AGCCTTGGGAAGACGGTGGAAACCCGAGGATGTGTGGGTTTCCCAGCTAACGGACAAGCTCCCCTGCCACACCCAGTGCCCACGCATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 90 bp CTGGCAGCCGGAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTaGTCCATTCCTGGGGATCAGCTTCACCCTCCTGAAACTGACCTC +
Preference number: 1 (lower is better)
Translates to: LAAGEAQIGGCAHGS*SIPGDQLHPPETDL
Trigger: GAGGTCAGTTTCAGGAGGGTGAAGCTGATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTCCGGCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR TCA 90 bp GACACGGAACTGGTAGTTGACATACGGGGACAGCCGGAGGACGGCTaGGTTAACGCTGCCGGGGTACTTGGAATGGTCATGCCAGACCCC +
Preference number: 1 (lower is better)
Translates to: DTELVVDIRGQPEDG*VNAAGVLGMVMPDP
Trigger: GGGGTCTGGCATGACCATTCCAAGTACCCCGGCAGCGTTAACTCAGCCGTCCTCCGGCTGTCCCCGTATGTCAACTACCAGTTCCGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR GCA 90 bp AGTACAGAGCCTGGCAGGACACTGGAACGAGGTGCAGAGGCAGGCTaGGGGCTTACTTCTCCCCAAGACCCTTACGAGAGAAGCAGCCCT +
Preference number: 1 (lower is better)
Translates to: STEPGRTLERGAEAG*GLTSPQDPYERSSP
Trigger: AGGGCTGCTTCTCTCGTAAGGGTCTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGCCAGGCTCTGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp AAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATaGGCCCTGGCCACGTGGACAGGTGCCCTCTACTCTGGACAGGGT +
Preference number: 1 (lower is better)
Translates to: KAFASQGSISSRVAA*ALATWTGALYSGQG
Trigger: ACCCTGTCCAGAGTAGAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CCA 90 bp GCGCCGATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTaGGGTAGTTGCTTGGGAGACCCAGCTGGCAGGCAGTACTGGGCA +
Preference number: 1 (lower is better)
Translates to: APMAWCCPGFTVGMS*GSCLGDPAGRQYWA
Trigger: TGCCCAGTACTGCCTGCCAGCTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCATCGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 90 bp GAGTGGCCACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTaGTCTCCTGGAGATAGACGTTGCTGGAGGCTTCAAGGCTTGCAG +
Preference number: 1 (lower is better)
Translates to: EWPLLVLPEHLHRLP*SPGDRRCWRLQGLQ
Trigger: CTGCAAGCCTTGAAGCCTCCAGCAACGTCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTGGCCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR GCA 90 bp GTGGTGTGGCAGACTTGCTCATCGTCCCTTCCTGCCCTAAGGGCCTaGTTTCGGTGCAATGGGTACGCTGGCATGTACGGTGCAGTATGG +
Preference number: 1 (lower is better)
Translates to: VVWQTCSSSLPALRA*FRCNGYAGMYGAVW
Trigger: CCATACTGCACCGTACATGCCAGCGTACCCATTGCACCGAAAGCAGGCCCTTAGGGCAGGAAGGGACGATGAGCAAGTCTGCCACACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 90 bp TCCCAGTCACCAGGTGGTGTGGCAGACTTGCTCATCGTCCCTTCCTaGCCTAAGGGCCTGCTTTCGGTGCAATGGGTACGCTGGCATGTA +
Preference number: 1 (lower is better)
Translates to: SQSPGGVADLLIVPS*PKGLLSVQWVRWHV
Trigger: TACATGCCAGCGTACCCATTGCACCGAAAGCAGGCCCTTAGGGCAGGAAGGGACGATGAGCAAGTCTGCCACACCACCTGGTGACTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 90 bp ACGAGAGAAGCAGCCCTTCCCAGTCACCAGGTGGTGTGGCAGACTTaGTCATCGTCCCTTCCTGCCCTAAGGGCCTGCTTTCGGTGCAAT +
Preference number: 1 (lower is better)
Translates to: TREAALPSHQVVWQT*SSSLPALRACFRCN
Trigger: ATTGCACCGAAAGCAGGCCCTTAGGGCAGGAAGGGACGATGAGCAAGTCTGCCACACCACCTGGTGACTGGGAAGGGCTGCTTCTCTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp CCCAGCACTTTCCTCCCAGCCAGACAGACTGGAGCGCCGATGGCATaGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGC +
Preference number: 1 (lower is better)
Translates to: PSTFLPARQTGAPMA*CCPGFTVGMSWGSC
Trigger: GCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCATCGGCGCTCCAGTCTGTCTGGCTGGGAGGAAAGTGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 90 bp GGAGACCCAGCTGGCAGGCAGTACTGGGCAATTCCACTTTCCTGCTaGGCTGGAGTGGACTCTGACATGGGCTCCATGGAAAATGCACCC +
Preference number: 1 (lower is better)
Translates to: GDPAGRQYWAIPLSC*AGVDSDMGSMENAP
Trigger: GGGTGCATTTTCCATGGAGCCCATGTCAGAGTCCACTCCAGCTCAGCAGGAAAGTGGAATTGCCCAGTACTGCCTGCCAGCTGGGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 90 bp CTTCAGTGGGCGCAGCCCTGGGATAATCTTCTCCGGAGTAACCGATaGCGGACTCTGGCTCAGGGCCCTTCCCGAAGTCATTTTCAGCCT +
Preference number: 1 (lower is better)
Translates to: LQWAQPWDNLLRSNR*RTLAQGPSRSHFQP
Trigger: AGGCTGAAAATGACTTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATCGGTTACTCCGGAGAAGATTATCCCAGGGCTGCGCCCACTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR GCA 90 bp GTGTTGAGTGGCCACTTCTGGTCCTGCCGGAACACTTGCATAGGCTaGCCTGCTCTCCTGGAGATAGACGTTGCTGGAGGCTTCAAGGCT +
Preference number: 1 (lower is better)
Translates to: VLSGHFWSCRNTCIG*PALLEIDVAGGFKA
Trigger: AGCCTTGAAGCCTCCAGCAACGTCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTGGCCACTCAACAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR GCA 90 bp CTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTaGTCTGTCCCGCCCAGCCTTGGTGACCAGATGGACCAAGCTCTC +
Preference number: 1 (lower is better)
Translates to: LRKQDCFSSHTVVLD*SVPPSLGDQMDQAL
Trigger: GAGAGCTTGGTCCATCTGGTCACCAAGGCTGGGCGGGACAGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 90 bp CGGAGGACGGCTGAGTTAACGCTGCCGGGGTACTTGGAATGGTCATaGCAGACCCCAGGTTGGAACTGGTCTTCTTCAAACTGGACGACG +
Preference number: 1 (lower is better)
Translates to: RRTAELTLPGYLEWS*QTPGWNWSSSNWTT
Trigger: CGTCGTCCAGTTTGAAGAAGACCAGTTCCAACCTGGGGTCTGGCATGACCATTCCAAGTACCCCGGCAGCGTTAACTCAGCCGTCCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR CCA 90 bp AAGACCCTTACGAGAGAAGCAGCCCTTCCCAGTCACCAGGTGGTGTaGCAGACTTGCTCATCGTCCCTTCCTGCCCTAAGGGCCTGCTTT +
Preference number: 1 (lower is better)
Translates to: KTLTREAALPSHQVV*QTCSSSLPALRACF
Trigger: AAAGCAGGCCCTTAGGGCAGGAAGGGACGATGAGCAAGTCTGCCACACCACCTGGTGACTGGGAAGGGCTGCTTCTCTCGTAAGGGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp AGATGCCCAGCACTTTCCTCCCAGCCAGACAGACTGGAGCGCCGATaGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTA +
Preference number: 1 (lower is better)
Translates to: RCPALSSQPDRLERR*HGAVLASLLVCLGV
Trigger: TACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCATCGGCGCTCCAGTCTGTCTGGCTGGGAGGAAAGTGCTGGGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp GAGCAAAGAGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTaGTTCTTGACTGCTCTGTCCCGCCCAGCCTTGGTGACCAGATGG +
Preference number: 1 (lower is better)
Translates to: EQRGSGSRTVSQATP*FLTALSRPALVTRW
Trigger: CCATCTGGTCACCAAGGCTGGGCGGGACAGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCTCTTTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp GTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTGGGTGTaGCAGGGGAGCTTGTCCGTTAGCTGGGAAACCCACACATCCTCG +
Preference number: 1 (lower is better)
Translates to: VVVCCMYVSMRGHWV*QGSLSVSWETHTSS
Trigger: CGAGGATGTGTGGGTTTCCCAGCTAACGGACAAGCTCCCCTGCCACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp GACAGCCGGAGGACGGCTGAGTTAACGCTGCCGGGGTACTTGGAATaGTCATGCCAGACCCCAGGTTGGAACTGGTCTTCTTCAAACTGG +
Preference number: 1 (lower is better)
Translates to: DSRRTAELTLPGYLE*SCQTPGWNWSSSNW
Trigger: CCAGTTTGAAGAAGACCAGTTCCAACCTGGGGTCTGGCATGACCATTCCAAGTACCCCGGCAGCGTTAACTCAGCCGTCCTCCGGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR CCA 90 bp CGCAGCCCTGGGATAATCTTCTCCGGAGTAACCGATGACGGACTCTaGCTCAGGGCCCTTCCCGAAGTCATTTTCAGCCTGGACTCGGAT +
Preference number: 1 (lower is better)
Translates to: RSPGIIFSGVTDDGL*LRALPEVIFSLDSD
Trigger: ATCCGAGTCCAGGCTGAAAATGACTTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATCGGTTACTCCGGAGAAGATTATCCCAGGGCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR TCA 90 bp TCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTaGGGACGTGTGTTGAGTGGCCACTTCTGGTCCTGCCGGAACACT +
Preference number: 1 (lower is better)
Translates to: SENCRSASVSIWGDW*GRVLSGHFWSCRNT
Trigger: AGTGTTCCGGCAGGACCAGAAGTGGCCACTCAACACACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR TCA 90 bp TGTTTCCAATATAGAGCGGCTCGTCATCCTTCAGCCAGGAGACGGTaGGTTTCAGGGAGGGGTCGTGCTTCACCCGACACTCCAGCTGCA +
Preference number: 1 (lower is better)
Translates to: CFQYRAARHPSARRR*VSGRGRASPDTPAA
Trigger: TGCAGCTGGAGTGTCGGGTGAAGCACGACCCCTCCCTGAAACTCACCGTCTCCTGGCTGAAGGATGACGAGCCGCTCTATATTGGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR GCA 90 bp AGCACTTTCCTCCCAGCCAGACAGACTGGAGCGCCGATGGCATGGTaGTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTG +
Preference number: 1 (lower is better)
Translates to: STFLPARQTGAPMAW*CPGFTVGMSWGSCL
Trigger: CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCATCGGCGCTCCAGTCTGTCTGGCTGGGAGGAAAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp AACAGGGTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTaGGTGTGGCAGGGGAGCTTGTCCGTTAGCTGGGAAACCCACACA +
Preference number: 1 (lower is better)
Translates to: NRVVVCCMYVSMRGH*VWQGSLSVSWETHT
Trigger: TGTGTGGGTTTCCCAGCTAACGGACAAGCTCCCCTGCCACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCACAACCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 90 bp GCAGTACTGGGCAATTCCACTTTCCTGCTGAGCTGGAGTGGACTCTaGCATGGGCTCCATGGAAAATGCACCCTCCTCTTCCCCAAAGGG +
Preference number: 1 (lower is better)
Translates to: AVLGNSTFLLSWSGL*HGLHGKCTLLFPKG
Trigger: CCCTTTGGGGAAGAGGAGGGTGCATTTTCCATGGAGCCCATGTCAGAGTCCACTCCAGCTCAGCAGGAAAGTGGAATTGCCCAGTACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 90 bp CCTCGGGTTTCCACCGTCTTCCCAAGGCTGTGGTCAGGGAAACTATaGATGCGCTATGTGGGCTCAGTTGCACCTTGCAGGGCAAGCAAT +
Preference number: 1 (lower is better)
Translates to: PRVSTVFPRLWSGKL*MRYVGSVAPCRASN
Trigger: ATTGCTTGCCCTGCAAGGTGCAACTGAGCCCACATAGCGCATTCATAGTTTCCCTGACCACAGCCTTGGGAAGACGGTGGAAACCCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 90 bp CAGACTTGCTCATCGTCCCTTCCTGCCCTAAGGGCCTGCTTTCGGTaGAATGGGTACGCTGGCATGTACGGTGCAGTATGGAATGAGTGT +
Preference number: 1 (lower is better)
Translates to: QTCSSSLPALRACFR*NGYAGMYGAVWNEC
Trigger: ACACTCATTCCATACTGCACCGTACATGCCAGCGTACCCATTGCACCGAAAGCAGGCCCTTAGGGCAGGAAGGGACGATGAGCAAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 90 bp GCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTaGTTGGGAGACCCAGCTGGCAGGCAGTACTGGGCAATTCCACTT +
Preference number: 1 (lower is better)
Translates to: AWCCPGFTVGMSWGS*LGDPAGRQYWAIPL
Trigger: AAGTGGAATTGCCCAGTACTGCCTGCCAGCTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 90 bp CCTAAACAGGGCCCAACCCTGGTGGCCTTTCCCACTCCTCTAAGGTaGGTTCCTCATCCACACAGAGCCCTTTGCATCTTATCTCACGCA +
Preference number: 1 (lower is better)
Translates to: PKQGPTLVAFPTPLR*VPHPHRALCILSHA
Trigger: TGCGTGAGATAAGATGCAAAGGGCTCTGTGTGGATGAGGAACGCACCTTAGAGGAGTGGGAAAGGCCACCAGGGTTGGGCCCTGTTTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 90 bp TTAGTAAGGAAGGGAAAGAAAGGACACTTCCCTGGGCTTGGGCTGTaGAGGCTGGGGACAGCCACAAAGTCTGGCTTGGACTCACATGGG +
Preference number: 1 (lower is better)
Translates to: LVRKGKKGHFPGLGL*RLGTATKSGLDSHG
Trigger: CCCATGTGAGTCCAAGCCAGACTTTGTGGCTGTCCCCAGCCTGCACAGCCCAAGCCCAGGGAAGTGTCCTTTCTTTCCCTTCCTTACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp GCCCTCTACTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTaGGTTTCACCAGTGAGGAGGCATGAAGTCCAAACCCAGCCTTTT +
Preference number: 1 (lower is better)
Translates to: ALYSGQGGCGPLSTS*VSPVRRHEVQTQPF
Trigger: AAAAGGCTGGGTTTGGACTTCATGCCTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAGTAGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CCA 90 bp GGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTaGGAGACCCAGCTGGCAGGCAGTACTGGGCAATTCCACTTTCCT +
Preference number: 1 (lower is better)
Translates to: GAVLASLLVCLGVVA*ETQLAGSTGQFHFP
Trigger: AGGAAAGTGGAATTGCCCAGTACTGCCTGCCAGCTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp CTATGTGGGCTCAGTTGCACCTTGCAGGGCAAGCAATGTTGGCACTaGCTGATTTTCAGACCTGTGGTCACCTCTCCCGACTTCAGGGCT +
Preference number: 1 (lower is better)
Translates to: LCGLSCTLQGKQCWH*LIFRPVVTSPDFRA
Trigger: AGCCCTGAAGTCGGGAGAGGTGACCACAGGTCTGAAAATCAGCCAGTGCCAACATTGCTTGCCCTGCAAGGTGCAACTGAGCCCACATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp CCGTCTTCCCAAGGCTGTGGTCAGGGAAACTATGAATGCGCTATGTaGGCTCAGTTGCACCTTGCAGGGCAAGCAATGTTGGCACTGGCT +
Preference number: 1 (lower is better)
Translates to: PSSQGCGQGNYECAM*AQLHLAGQAMLALA
Trigger: AGCCAGTGCCAACATTGCTTGCCCTGCAAGGTGCAACTGAGCCCACATAGCGCATTCATAGTTTCCCTGACCACAGCCTTGGGAAGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 90 bp CTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTaGAGGTGGTGGTGGCTTCGTGGTAGGTCTGCAGTGGTTTTGTCT +
Preference number: 1 (lower is better)
Translates to: LVLTAWQTPISYPCY*RWWWLRGRSAVVLS
Trigger: AGACAAAACCACTGCAGACCTACCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR TCA 90 bp AACTCCAGGGACAGATCAGCGCTGCATAAGGCATACAAAGAGCATTaGGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGCC +
Preference number: 1 (lower is better)
Translates to: NSRDRSALHKAYKEH*VLPRWGHHNTEYGA
Trigger: GGCACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGTATGCCTTATGCAGCGCTGATCTGTCCCTGGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR TCA 90 bp CCCTCAGGCGTCCAGGCAGCAGCCCTAGCTGAGGCTTGGCCCAAATaGCCATTACACACTCTCAGGTTCAAACAACCTTATTGGCTCAGT +
Preference number: 1 (lower is better)
Translates to: PSGVQAAALAEAWPK*PLHTLRFKQPYWLS
Trigger: ACTGAGCCAATAAGGTTGTTTGAACCTGAGAGTGTGTAATGGTCATTTGGGCCAAGCCTCAGCTAGGGCTGCTGCCTGGACGCCTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR TCA 90 bp GCACCCTGTGGCCATGGGCAGAATGGACCGAGATGCCCTCACTTCTaGGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGA +
Preference number: 1 (lower is better)
Translates to: APCGHGQNGPRCPHF*GIQHTEGPMCYKAR
Trigger: TCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGCATCTCGGTCCATTCTGCCCATGGCCACAGGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 90 bp GTCCATGTATTAGACGGCCCTCCATGGCCCAGAAGTCTTCCCTGCTaGAGGTCGTGTGTGACACCCTCAGATACGCATCTGTCACTGACA +
Preference number: 1 (lower is better)
Translates to: VHVLDGPPWPRSLPC*RSCVTPSDTHLSLT
Trigger: TGTCAGTGACAGATGCGTATCTGAGGGTGTCACACACGACCTTCAGCAGGGAAGACTTCTGGGCCATGGAGGGCCGTCTAATACATGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 90 bp CCAACCAAACCAGAGAGCAGCAAGGAGGCCTGCGCACCTTCTCCCTaGCAAAAATACTGTCATTTTCCAGAAAGGAGCCAAGCCCAGCTC +
Preference number: 1 (lower is better)
Translates to: PTKPESSKEACAPSP*QKYCHFPERSQAQL
Trigger: GAGCTGGGCTTGGCTCCTTTCTGGAAAATGACAGTATTTTTGGCAGGGAGAAGGTGCGCAGGCCTCCTTGCTGCTCTCTGGTTTGGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR GCA 90 bp TGTACTTCCCGAACCCTGGCCTCGACAATCCTTCAGGGGAGCCCGTaGCTCTCTGTAGAAAGAGGTATTCAAGGAGGAACTGAATGGGAG +
Preference number: 1 (lower is better)
Translates to: CTSRTLASTILQGSP*LSVERGIQGGTEWE
Trigger: CTCCCATTCAGTTCCTCCTTGAATACCTCTTTCTACAGAGAGGCACGGGCTCCCCTGAAGGATTGTCGAGGCCAGGGTTCGGGAAGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 90 bp GGGTTTCCACCGTCTTCCCAAGGCTGTGGTCAGGGAAACTATGAATaGGCTATGTGGGCTCAGTTGCACCTTGCAGGGCAAGCAATGTTG +
Preference number: 1 (lower is better)
Translates to: GFPPSSQGCGQGNYE*AMWAQLHLAGQAML
Trigger: CAACATTGCTTGCCCTGCAAGGTGCAACTGAGCCCACATAGCGCATTCATAGTTTCCCTGACCACAGCCTTGGGAAGACGGTGGAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp CATTTTCTTCATACACAAAGGACAGTACAGAGCCTGGCAGGACACTaGAACGAGGTGCAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAG +
Preference number: 1 (lower is better)
Translates to: HFLHTQRTVQSLAGH*NEVQRQAAGLLLPK
Trigger: CTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGCCAGGCTCTGTACTGTCCTTTGTGTATGAAGAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp AGGGCTAACAGCATTTTCTTCATACACAAAGGACAGTACAGAGCCTaGCAGGACACTGGAACGAGGTGCAGAGGCAGGCTGCGGGCTTAC +
Preference number: 1 (lower is better)
Translates to: RANSIFFIHKGQYRA*QDTGTRCRGRLRAY
Trigger: GTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGCCAGGCTCTGTACTGTCCTTTGTGTATGAAGAAAATGCTGTTAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp AATGCGCTATGTGGGCTCAGTTGCACCTTGCAGGGCAAGCAATGTTaGCACTGGCTGATTTTCAGACCTGTGGTCACCTCTCCCGACTTC +
Preference number: 1 (lower is better)
Translates to: NALCGLSCTLQGKQC*HWLIFRPVVTSPDF
Trigger: GAAGTCGGGAGAGGTGACCACAGGTCTGAAAATCAGCCAGTGCCAACATTGCTTGCCCTGCAAGGTGCAACTGAGCCCACATAGCGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 90 bp AAAAATGTGCTATGTCCCTGCTCCCTCCATCAAATGGGCTGTTTGTaGTGCCCTAAGACTTGGCCCTGCTCCAGCACAGGGCGCCAGAAA +
Preference number: 1 (lower is better)
Translates to: KNVLCPCSLHQMGCL*CPKTWPCSSTGRQK
Trigger: TTTCTGGCGCCCTGTGCTGGAGCAGGGCCAAGTCTTAGGGCATCACAAACAGCCCATTTGATGGAGGGAGCAGGGACATAGCACATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 90 bp TGGGATTGCAGCCTAGTCAAAGGAACTTCTAGAGTTACTGTAAGATaGCCAGCACTTTCCTCCCAGCCAGACAGACTGGAGCGCCGATGG +
Preference number: 1 (lower is better)
Translates to: WDCSLVKGTSRVTVR*PALSSQPDRLERRW
Trigger: CCATCGGCGCTCCAGTCTGTCTGGCTGGGAGGAAAGTGCTGGGCATCTTACAGTAACTCTAGAAGTTCCTTTGACTAGGCTGCAATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp CGACACACGTGTAACTGCCCTGGTCCCGCTCTGCCACCCCAAAGATaGTCAGGGAGTCGTCTTCCTTCTTCATCCTGTTTCCAATATAGA +
Preference number: 1 (lower is better)
Translates to: RHTCNCPGPALPPQR*SGSRLPSSSCFQYR
Trigger: TCTATATTGGAAACAGGATGAAGAAGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAGAGCGGGACCAGGGCAGTTACACGTGTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR TCA 90 bp GACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTaGGGAGGCATGAAGTCCAAACCCAGCCTTTTTCTTCTCTCTAGA +
Preference number: 1 (lower is better)
Translates to: DRVGVALYLHPGFHQ*GGMKSKPSLFLLSR
Trigger: TCTAGAGAGAAGAAAAAGGCTGGGTTTGGACTTCATGCCTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR TCA 90 bp GAGGCTAGGTACCTTTGGTTTCAAAAATGCATTAGGTGGGGAGGATaGAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTC +
Preference number: 1 (lower is better)
Translates to: EARYLWFQKCIRWGG*RQHLRSENCRSASV
Trigger: GACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACCTAATGCATTTTTGAAACCAAAGGTACCTAGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR TCA 90 bp GCAGAATGGACCGAGATGCCCTCACTTCTGAGGAATACAGCACACTaGAGGCCCGATGTGTTACAAAGCAAGAGACACCATTCTACGGGG +
Preference number: 1 (lower is better)
Translates to: AEWTEMPSLLRNTAH*RPDVLQSKRHHSTG
Trigger: CCCCGTAGAATGGTGTCTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGCATCTCGGTCCATTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp AGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTaGAGGTACACAGTCACTGGCGTTGAAGTCCTTTCTATCAGTGCC +
Preference number: 1 (lower is better)
Translates to: SEHSAPKTRHLIFFC*RYTVTGVEVLSISA
Trigger: GGCACTGATAGAAAGGACTTCAACGCCAGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR TCA 90 bp TTCTTCTCTCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTaGTTTTCTTCTGCTGGAGGTACACAGTCACTGGCGTTGAAGTCC +
Preference number: 1 (lower is better)
Translates to: FFSLEVSTVPPRPDT*FSSAGGTQSLALKS
Trigger: GGACTTCAACGCCAGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGAGAGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR GCA 90 bp AAGGCTGTGGTCAGGGAAACTATGAATGCGCTATGTGGGCTCAGTTaGACCTTGCAGGGCAAGCAATGTTGGCACTGGCTGATTTTCAGA +
Preference number: 1 (lower is better)
Translates to: KAVVRETMNALCGLS*TLQGKQCWHWLIFR
Trigger: TCTGAAAATCAGCCAGTGCCAACATTGCTTGCCCTGCAAGGTGCAACTGAGCCCACATAGCGCATTCATAGTTTCCCTGACCACAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp GCAACTTGGATGTGGACTAACCCTCTCCAAGACAATGTTGGAATCTaGATCGCTATCCCTTGGAAGCACTGCTTGGCAACAGGGTTGTGG +
Preference number: 1 (lower is better)
Translates to: ATWMWTNPLQDNVGI*IAIPWKHCLATGLW
Trigger: CCACAACCCTGTTGCCAAGCAGTGCTTCCAAGGGATAGCGATCCAGATTCCAACATTGTCTTGGAGAGGGTTAGTCCACATCCAAGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp CAAAGACAGACAAAAATGTGCTATGTCCCTGCTCCCTCCATCAAATaGGCTGTTTGTGATGCCCTAAGACTTGGCCCTGCTCCAGCACAG +
Preference number: 1 (lower is better)
Translates to: QRQTKMCYVPAPSIK*AVCDALRLGPAPAQ
Trigger: CTGTGCTGGAGCAGGGCCAAGTCTTAGGGCATCACAAACAGCCCATTTGATGGAGGGAGCAGGGACATAGCACATTTTTGTCTGTCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 90 bp TGGGGTGGACCAGATGTCTCCAACCTCTCAGAGCACAAAGGAGGGTaGTGGTTTGGCTTTCCTGTTAGCTTAAATTCAACCATCTCCTCA +
Preference number: 1 (lower is better)
Translates to: WGGPDVSNLSEHKGG*WFGFPVSLNSTISS
Trigger: TGAGGAGATGGTTGAATTTAAGCTAACAGGAAAGCCAAACCAGCACCCTCCTTTGTGCTCTGAGAGGTTGGAGACATCTGGTCCACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 90 bp TTTCCCACTCCTCTAAGGTGCGTTCCTCATCCACACAGAGCCCTTTaGATCTTATCTCACGCAACTTGGATGTGGACTAACCCTCTCCAA +
Preference number: 1 (lower is better)
Translates to: FPTPLRCVPHPHRAL*ILSHATWMWTNPLQ
Trigger: TTGGAGAGGGTTAGTCCACATCCAAGTTGCGTGAGATAAGATGCAAAGGGCTCTGTGTGGATGAGGAACGCACCTTAGAGGAGTGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp AAGACAATGTTGGAATCTGGATCGCTATCCCTTGGAAGCACTGCTTaGCAACAGGGTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGG +
Preference number: 1 (lower is better)
Translates to: KTMLESGSLSLGSTA*QQGCGLLYVCEHAW
Trigger: CCACGCATGCTCACATACATACAGCAGACCACAACCCTGTTGCCAAGCAGTGCTTCCAAGGGATAGCGATCCAGATTCCAACATTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 90 bp CAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTGGCGTTaGAGTCCTTTCTATCAGTGCCCACTCCTGTTCCTCAAACGTCTT +
Preference number: 1 (lower is better)
Translates to: QTPDFLLLEVHSHWR*SPFYQCPLLFLKRL
Trigger: AAGACGTTTGAGGAACAGGAGTGGGCACTGATAGAAAGGACTTCAACGCCAGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR TCA 90 bp TACGCTGGCATGTACGGTGCAGTATGGAATGAGTGTCTGAGAAACTaGCTACTCTGCTCAGATCCAAAGCGTTTTCTGGAAAGGCCAGTC +
Preference number: 1 (lower is better)
Translates to: YAGMYGAVWNECLRN*LLCSDPKRFLERPV
Trigger: GACTGGCCTTTCCAGAAAACGCTTTGGATCTGAGCAGAGTAGTCAGTTTCTCAGACACTCATTCCATACTGCACCGTACATGCCAGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 90 bp CTTTCGGTGCAATGGGTACGCTGGCATGTACGGTGCAGTATGGAATaGGTGTCTGAGAAACTGACTACTCTGCTCAGATCCAAAGCGTTT +
Preference number: 1 (lower is better)
Translates to: LSVQWVRWHVRCSME*VSEKLTTLLRSKAF
Trigger: AAACGCTTTGGATCTGAGCAGAGTAGTCAGTTTCTCAGACACTCATTCCATACTGCACCGTACATGCCAGCGTACCCATTGCACCGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 90 bp TACCTCTGTTTCAAAGGAGGCAGCTGTGGTGAGATGAAAGAACACTaGCTGGACAAGGAGTCAGAAGGCCCAAGTTCAAGCCCTAACCTT +
Preference number: 1 (lower is better)
Translates to: YLCFKGGSCGEMKEH*LDKESEGPSSSPNL
Trigger: AAGGTTAGGGCTTGAACTTGGGCCTTCTGACTCCTTGTCCAGTCAGTGTTCTTTCATCTCACCACAGCTGCCTCCTTTGAAACAGAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 90 bp GCAATGGGTACGCTGGCATGTACGGTGCAGTATGGAATGAGTGTCTaGGAAACTGACTACTCTGCTCAGATCCAAAGCGTTTTCTGGAAA +
Preference number: 1 (lower is better)
Translates to: AMGTLACTVQYGMSV*ETDYSAQIQSVFWK
Trigger: TTTCCAGAAAACGCTTTGGATCTGAGCAGAGTAGTCAGTTTCTCAGACACTCATTCCATACTGCACCGTACATGCCAGCGTACCCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 90 bp TTTTGGGAGGCATGTGGGGGATGTGGGAGACGCAGTAAAGAGGTATaGGAGGGTGAACCAGAAGGACAGATCTTAATACCTCTGTTTCAA +
Preference number: 1 (lower is better)
Translates to: FWEACGGCGRRSKEV*EGEPEGQILIPLFQ
Trigger: TTGAAACAGAGGTATTAAGATCTGTCCTTCTGGTTCACCCTCTCATACCTCTTTACTGCGTCTCCCACATCCCCCACATGCCTCCCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 90 bp TTCTATCAGTGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATaGAGCTCACATCTTAGATATTCCAGAGAAAAGGGCAGGGGAGGA +
Preference number: 1 (lower is better)
Translates to: FYQCPLLFLKRLQSQ*SSHLRYSREKGRGG
Trigger: TCCTCCCCTGCCCTTTTCTCTGGAATATCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCACTGATAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CCA 90 bp CACACTCTCAGGTTCAAACAACCTTATTGGCTCAGTTCTGGGCTATaGTTTCTTACCAGCAGAGAGTGTGTGTCTATGGGCTTGACCTTC +
Preference number: 1 (lower is better)
Translates to: HTLRFKQPYWLSSGL*FLTSRECVSMGLTF
Trigger: GAAGGTCAAGCCCATAGACACACACTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAACCTGAGAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR CCA 90 bp GGTGGACCAGATGTCTCCAACCTCTCAGAGCACAAAGGAGGGTGCTaGTTTGGCTTTCCTGTTAGCTTAAATTCAACCATCTCCTCAAAA +
Preference number: 1 (lower is better)
Translates to: GGPDVSNLSEHKGGC*FGFPVSLNSTISSK
Trigger: TTTTGAGGAGATGGTTGAATTTAAGCTAACAGGAAAGCCAAACCAGCACCCTCCTTTGTGCTCTGAGAGGTTGGAGACATCTGGTCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 90 bp GGCGAGAAAGGCATCCTTTGGAAATGCATTGGCCCAGAGGTGGTTTaGATATTACAGCCTGTCTACGTGTTCTGGTATGGATTCAATCCT +
Preference number: 1 (lower is better)
Translates to: GEKGILWKCIGPEVV*ILQPVYVFWYGFNP
Trigger: AGGATTGAATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR TCA 90 bp ACAGATCTTAATACCTCTGTTTCAAAGGAGGCAGCTGTGGTGAGATaGAAGAACACTGACTGGACAAGGAGTCAGAAGGCCCAAGTTCAA +
Preference number: 1 (lower is better)
Translates to: TDLNTSVSKEAAVVR*KNTDWTRSQKAQVQ
Trigger: TTGAACTTGGGCCTTCTGACTCCTTGTCCAGTCAGTGTTCTTTCATCTCACCACAGCTGCCTCCTTTGAAACAGAGGTATTAAGATCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 90 bp CATATGGCGAGAAAGGCATCCTTTGGAAATGCATTGGCCCAGAGGTaGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTCA +
Preference number: 1 (lower is better)
Translates to: HMARKASFGNALAQR*FEYYSLSTCSGMDS
Trigger: TGAATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTCGCCATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CCA 90 bp ACCATTACACACTCTCAGGTTCAAACAACCTTATTGGCTCAGTTCTaGGCTATGGTTTCTTACCAGCAGAGAGTGTGTGTCTATGGGCTT +
Preference number: 1 (lower is better)
Translates to: TITHSQVQTTLLAQF*AMVSYQQRVCVYGL
Trigger: AAGCCCATAGACACACACTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAACCTGAGAGTGTGTAATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR CCA 90 bp GTTAAAGGCCACATATTTGAGAGTGTATCCAATCATGATCCCATTTaGATGCTCAGGATGATCCCATTCCAGGTTGATTGTCTCCAGGTT +
Preference number: 1 (lower is better)
Translates to: VKGHIFESVSNHDPI*MLRMIPFQVDCLQV
Trigger: AACCTGGAGACAATCAACCTGGAATGGGATCATCCTGAGCATCCAAATGGGATCATGATTGGATACACTCTCAAATATGTGGCCTTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR TCA 90 bp TTCTGTGGATTTGCATATCCTTGTCTGTACGATAGATCATTTCAATaGGATCAGCTCTGGGATTCCTTCACATGCCGAAATCCGATTCTG +
Preference number: 1 (lower is better)
Translates to: FCGFAYPCLYDRSFQ*DQLWDSFTCRNPIL
Trigger: CAGAATCGGATTTCGGCATGTGAAGGAATCCCAGAGCTGATCTCATTGAAATGATCTATCGTACAGACAAGGATATGCAAATCCACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGCAGGCTCCCTCCAGCTaGGCTCAGCCACGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPQAPSS*AQPRLQ
Trigger: CTGGAGCCGTGGCTGAGCTCAGCTGGAGGGAGCCTG...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGCTCTCCCACACTGGTaGCACCCGGGGCTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPALPHW*HPGLKG
Trigger: CCCCTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGC...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCAGGCTCCCTCCAGCTaGGCTCAGCCACGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAQAPSS*AQPRLQ
Trigger: CTGGAGCCGTGGCTGAGCTCAGCTGGAGGGAGCCTG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCAGGCTCCCTCCAGCTaGGCTCAGCCACGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: DSVVERSGWLRDRARGQAQAPSS*AQPRLQ
Trigger: CTGGAGCCGTGGCTGAGCTCAGCTGGAGGGAGCCTG...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGCTCTCCCACACTGGTaGCACCCGGGGCTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: PRADSVVERSGWLRDRARALPHW*HPGLKG
Trigger: CCCCTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGC...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGTGGAACGCTCGGGGTaGCTGCGAGACCGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAVERSG*LRDRAR
Trigger: CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCAC...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGGGCGGACAGTGTGGTaGAACGCTCGGGGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAGRTVW*NARGGC
Trigger: GCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCC...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGGAAGGACAGAGCCCTaGTCTGGCCCAGGCCCCCTG +
Preference number: 2 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAGRTEP*SGPGPL
Trigger: CAGGGGGCCTGGGCCAGACCAGGGCTCTGTCCTTCC...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp AGCCGCACGCTCCTCTCGGCCAGGTCGGTCAGCTCCAGGTCCCGGGGCCGGTCTCGACACACGTGTAACTaGCCTGGTCCCGCTCTGCCA +
Preference number: 2 (lower is better)
Translates to: SRTLLSARSVSSRSRGRSRHTCN*PGPALP
Trigger: TGGCAGAGCGGGACCAGGGCAGTTACACGTGTGTCG...AGACCGGCCCCGGGACCTGGAGCTGACCGACCTGGCCGAGAGGAGCGTGCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCGAGGGGGCTTGTGGGTaGCTTGGTGGCTACTGGTCC +
Preference number: 2 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLEGACG*LGGYWS
Trigger: GGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTC...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAGAGGGGGCTTGTGGGTaGCTTGGTGGCTACTGGTCC +
Preference number: 2 (lower is better)
Translates to: WWNARGGCETGQGARLPPEGACG*LGGYWS
Trigger: GGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTC...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCAGCTCTCCCACACTaGTGGCACCCGGGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: DSVVERSGWLRDRARGQAPALPH*WHPGLK
Trigger: CTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGG...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTGGCCACGTGGACAGGTaGCCTCTACTCTGGACAGGG +
Preference number: 2 (lower is better)
Translates to: DSVVERSGWLRDRARGQAGHVDR*PLLWTG
Trigger: CCCTGTCCAGAGTAGAGGGCACCTGTCCACGTGGCC...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTACCCGACACTCCAGCTaGACCGTGGTGCCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: PAELSHGSSSPTLVAPGATRHSS*TVVPLL
Trigger: CAGAAGGGGCACCACGGTGCAGCTGGAGTGTCGGGT...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGGAGGGGGCTTGTGGGTaGCTTGGTGGCTACTGGTCC +
Preference number: 2 (lower is better)
Translates to: QLSSATAPALPHWWHPGLEGACG*LGGYWS
Trigger: GGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTC...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTGAGGGGGCTTGTGGGTaGCTTGGTGGCTACTGGTCC +
Preference number: 2 (lower is better)
Translates to: DSVVERSGWLRDRARGQAEGACG*LGGYWS
Trigger: GGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTC...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGTTGGGAGGGGGCTTGTaGGTGGCTTGGTGGCTACTG +
Preference number: 2 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPLGGGL*VAWWLL
Trigger: CAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAA...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCATTGGGAGGGGGCTTGTaGGTGGCTTGGTGGCTACTG +
Preference number: 2 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPLGGGL*VAWWLL
Trigger: CAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAA...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGTTGGGAGGGGGCTTGTaGGTGGCTTGGTGGCTACTG +
Preference number: 2 (lower is better)
Translates to: PRPRADSVVERSGWLRDRLGGGL*VAWWLL
Trigger: CAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAA...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGTTGGGAGGGGGCTTGTaGGTGGCTTGGTGGCTACTG +
Preference number: 2 (lower is better)
Translates to: ADSVVERSGWLRDRARGQLGGGL*VAWWLL
Trigger: CAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAA...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGGCTCTCCCACACTGGTaGCACCCGGGGCTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVALPHW*HPGLKG
Trigger: CCCCTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGC...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCGTCTTCATTGAACTaGCCCTCGCCACCCTCGCCA +
Preference number: 2 (lower is better)
Translates to: DSVVERSGWLRDRARGQAPSSLN*PSPPSP
Trigger: TGGCGAGGGTGGCGAGGGTCAGTTCAATGAAGACGG...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR GCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAAACGCTCGGGGTGGCTaGGAGACCGGGCAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRNARGG*ETGQGA
Trigger: GGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTT...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCTTGTGGGTGGCTTaGTGGCTACTGGTCCTCACA +
Preference number: 2 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPGLWVA*WLLVLT
Trigger: TGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCC...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTTGTGGGTGGCTTaGTGGCTACTGGTCCTCACA +
Preference number: 2 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPGLWVA*WLLVLT
Trigger: TGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCC...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGCTCTCCCACACTGGTaGCACCCGGGGCTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: SQGSISSRVAAWALATWTALPHW*HPGLKG
Trigger: CCCCTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGC...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGGCGGACAGTGTGGTaGAACGCTCGGGGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: SQGSISSRVAAWALATWTGRTVW*NARGGC
Trigger: GCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCC...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATCAGGCTCCCTCCAGCTaGGCTCAGCCACGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: GLVGGLVATGPHSLADPHQAPSS*AQPRLQ
Trigger: CTGGAGCCGTGGCTGAGCTCAGCTGGAGGGAGCCTG...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTGGCCACTTCTGGTCCTaGCGGAACACTTGCATAGGC +
Preference number: 2 (lower is better)
Translates to: DSVVERSGWLRDRARGQAGHFWS*RNTCIG
Trigger: GCCTATGCAAGTGTTCCGGCAGGACCAGAAGTGGCC...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCACTGGTCCTCACAGCTTaGCAGACCCCCATATCGTAC +
Preference number: 2 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPLVLTA*QTPISY
Trigger: GTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCATGGCTTGGTGGCTACTaGTCCTCACAGCTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPWLGGY*SSQLGR
Trigger: TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGTGGCTTGGTGGCTACTaGTCCTCACAGCTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAAWLGGY*SSQLGR
Trigger: TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGTGGCTTGGTGGCTACTaGTCCTCACAGCTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: PRPRADSVVERSGWLRDRWLGGY*SSQLGR
Trigger: TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGTTGTGGGTGGCTTGGTaGCTACTGGTCCTCACAGCT +
Preference number: 2 (lower is better)
Translates to: PRPRADSVVERSGWLRDRLWVAW*LLVLTA
Trigger: AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAA...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCTTGTGGGTGGCTTGGTaGCTACTGGTCCTCACAGCT +
Preference number: 2 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLLWVAW*LLVLTA
Trigger: AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAA...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGCTTGTGGGTGGCTTaGTGGCTACTGGTCCTCACA +
Preference number: 2 (lower is better)
Translates to: GQGRTVWWNARGGCETGQGLWVA*WLLVLT
Trigger: TGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCC...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTGGCTTGTGGGTGGCTTaGTGGCTACTGGTCCTCACA +
Preference number: 2 (lower is better)
Translates to: DSVVERSGWLRDRARGQAGLWVA*WLLVLT
Trigger: TGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCC...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATGCTCTCCCACACTGGTaGCACCCGGGGCTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: GLVGGLVATGPHSLADPHALPHW*HPGLKG
Trigger: CCCCTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGC...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAAGGTGGGAGGCAGCTGTCCCCTGACCGATGGCAGTGTACTTCCCGAACCCTGGCTCTCCCACACTGGTaGCACCCGGGGCTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: QGGRQLSPDRWQCTSRTLALPHW*HPGLKG
Trigger: CCCCTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGC...CAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTCCCACCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGAGGTGCCCTCTACTCTaGACAGGGTGGGTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: ASQGSISSRVAAWALATWRCPLL*TGWVWP
Trigger: GGGCCACACCCACCCTGTCCAGAGTAGAGGGCACCT...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGATGGCAGCATGGGCCCTaGCCACGTGGACAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRWQHGP*PRGQVP
Trigger: GGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCA...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATTGGCAGCATGGGCCCTaGCCACGTGGACAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: GLVGGLVATGPHSLADPHWQHGP*PRGQVP
Trigger: GGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCA...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTAGGACGTGTGTTGAGTaGCCACTTCTGGTCCTGCCG +
Preference number: 2 (lower is better)
Translates to: PAELSHGSSSPTLVAPGARTCVE*PLLVLP
Trigger: CGGCAGGACCAGAAGTGGCCACTCAACACACGTCCT...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCCCCAGGCCCCCTGGCTaGCAGCCGGAGAGGCTCAAA +
Preference number: 2 (lower is better)
Translates to: LNSSPANPRVAACMGPAAPRPPG*QPERLK
Trigger: TTTGAGCCTCTCCGGCTGCCAGCCAGGGGGCCTGGG...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTGGGCCACTGCTTCTCTaGCTGCTGGGGAGGGGGTGG +
Preference number: 2 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPGPLLL*LLGRGW
Trigger: CCACCCCCTCCCCAGCAGCCAGAGAAGCAGTGGCCC...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
3UTR-3UTR CCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACGGGCCACTGCTTCTCTaGCTGCTGGGGAGGGGGTGG +
Preference number: 2 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNGPLLL*LLGRGW
Trigger: CCACCCCCTCCCCAGCAGCCAGAGAAGCAGTGGCCC...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
3UTR-3UTR CCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGACCTCCAGGCGGACTTaGTTTTCAGCTTTGCCCAGG +
Preference number: 2 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAATSRRT*FSALPR
Trigger: CCTGGGCAAAGCTGAAAACCAAGTCCGCCTGGAGGT...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR TCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGTCGTACCCTTGTTACTaGAGGTGGTGGTGGCTTCGT +
Preference number: 2 (lower is better)
Translates to: ADSVVERSGWLRDRARGQSYPCY*RWWWLR
Trigger: ACGAAGCCACCACCACCTTCAGTAACAAGGGTACGA...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTAACCAACAGAAAAGGTaGGCGTGTGCCGAGGCCAAG +
Preference number: 2 (lower is better)
Translates to: PAELSHGSSSPTLVAPGANQQKR*ACAEAK
Trigger: CTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTT...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTGCATACAAAGAGCATTaGGTCCTCCCTAGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: DSVVERSGWLRDRARGQAAYKEH*VLPRWG
Trigger: CCCCCACCTAGGGAGGACTCAATGCTCTTTGTATGC...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTACAGGCACACTTCCCTaGCATTCCCTTCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: PAELSHGSSSPTLVAPGATGTLP*HSLQGQ
Trigger: CTGTCCCTGAAGGGAATGTCAGGGAAGTGTGCCTGT...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCAACGCTCGGGGTGGCTaGGAGACCGGGCAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: ERLKSEAVPMAADPFLGINARGG*ETGQGA
Trigger: GGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTT...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGAGCAGCAAGGAGGCCTaGGCACCTTCTCCCTGCCAA +
Preference number: 2 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVSSKEA*APSPCQ
Trigger: TTGGCAGGGAGAAGGTGCGCAGGCCTCCTTGCTGCT...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAACTGGTCCTCACAGCTTaGCAGACCCCCATATCGTAC +
Preference number: 2 (lower is better)
Translates to: GQGRTVWWNARGGCETGQLVLTA*QTPISY
Trigger: GTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGTGGCTTGGTGGCTACTaGTCCTCACAGCTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: QLSSATAPALPHWWHPGLWLGGY*SSQLGR
Trigger: TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTTTGAGTGGCCACTTCTaGTCCTGCCGGAACACTTGC +
Preference number: 2 (lower is better)
Translates to: DSVVERSGWLRDRARGQALSGHF*SCRNTC
Trigger: GCAAGTGTTCCGGCAGGACCAGAAGTGGCCACTCAA...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCAGCTGATCCATTCCTaGGGATCAGCTTCACCCTCC +
Preference number: 2 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAQLIHS*GSASPS
Trigger: GGAGGGTGAAGCTGATCCCCAGGAATGGATCAGCTG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CTGCCCCACCACGTAGCGAGAGCCCCACACTGTGACGTTGTTCCAGGCCTCTCGGGTCTGGCCGTCCTTTaGGCAGGGCAGCCAAACGGT +
Preference number: 2 (lower is better)
Translates to: LPHHVARAPHCDVVPGLSGLAVL*AGQPNG
Trigger: ACCGTTTGGCTGCCCTGCCCAAAGGACGGCCAGACC...CGAGAGGCCTGGAACAACGTCACAGTGTGGGGCTCTCGCTACGTGGTGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CCA 90 bp TGTGACGGCTTCCCCAGAGCCCACCTGCGTCCTGGCGCTGAGGGTAAAGCGGTAGATGGGAGGCTGGGGTaGCTGCTCCCAACCTCGTTG +
Preference number: 2 (lower is better)
Translates to: CDGFPRAHLRPGAEGKAVDGRLG*LLPTSL
Trigger: CAACGAGGTTGGGAGCAGCCACCCCAGCCTCCCATC...TACCGCTTTACCCTCAGCGCCAGGACGCAGGTGGGCTCTGGGGAAGCCGTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR TCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAATCGTACCCTTGTTACTaGAGGTGGTGGTGGCTTCGT +
Preference number: 2 (lower is better)
Translates to: GQGRTVWWNARGGCETGQSYPCY*RWWWLR
Trigger: ACGAAGCCACCACCACCTTCAGTAACAAGGGTACGA...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGTCGTACCCTTGTTACTaGAGGTGGTGGTGGCTTCGT +
Preference number: 2 (lower is better)
Translates to: QLSSATAPALPHWWHPGLSYPCY*RWWWLR
Trigger: ACGAAGCCACCACCACCTTCAGTAACAAGGGTACGA...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCACCTCAGGGTCCCCTaGTATGTATACACCCCAATG +
Preference number: 2 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAHLRVP*YVYTPM
Trigger: CATTGGGGTGTATACATATCAGGGGACCCTGAGGTG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCACCTCAGGGTCCCCTaGTATGTATACACCCCAATG +
Preference number: 2 (lower is better)
Translates to: DSVVERSGWLRDRARGQAHLRVP*YVYTPM
Trigger: CATTGGGGTGTATACATATCAGGGGACCCTGAGGTG...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTTGTCTCCATTTGGGGTaGCTGGTGAGGACGTGTGTT +
Preference number: 2 (lower is better)
Translates to: PAELSHGSSSPTLVAPGACLHLG*LVRTCV
Trigger: AACACACGTCCTCACCAGTCACCCCAAATGGAGACA...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTGCTTGCTGTCTCTTCTaGGACACCCACAGGTTCTTC +
Preference number: 2 (lower is better)
Translates to: DSVVERSGWLRDRARGQAACCLF*DTHRFF
Trigger: GAAGAACCTGTGGGTGTCTCAGAAGAGACAGCAAGC...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR GCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAAACGCTCGGGGTGGCTaGGAGACCGGGCAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: HFWSCRNTCIGCPALLEINARGG*ETGQGA
Trigger: GGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTT...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTTTGCATAGGCTGCCCTaGTCTCCTGGAGATAGACGT +
Preference number: 2 (lower is better)
Translates to: DSVVERSGWLRDRARGQALHRLP*SPGDRR
Trigger: ACGTCTATCTCCAGGAGAGCAGGGCAGCCTATGCAA...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGTGGTAGGTCTGCAGTaGTTTTGTCTCCCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: RVPRPRADSVVERSGWLRVVGLQ*FCLPFS
Trigger: GGAGAAGGGGAGACAAAACCACTGCAGACCTACCAC...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCTGGCTTGGTGGCTACTaGTCCTCACAGCTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: SISSRVAAWALATWTGALWLGGY*SSQLGR
Trigger: TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGGGCTTGTGGGTGGCTTaGTGGCTACTGGTCCTCACA +
Preference number: 2 (lower is better)
Translates to: ASQGSISSRVAAWALATWGLWVA*WLLVLT
Trigger: TGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCC...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACGGGCGGACAGTGTGGTaGAACGCTCGGGGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHGRTVW*NARGGC
Trigger: GCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCC...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGCAAGGGCGGACAGTGTaGTGGAACGCTCGGGGTGGC +
Preference number: 2 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVQGRTV*WNARGG
Trigger: GCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTG...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTGGAGATAGACGTTGCTaGAGGCTTCAAGGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: DSVVERSGWLRDRARGQAGDRRC*RLQGLQ
Trigger: CTGCAAGCCTTGAAGCCTCCAGCAACGTCTATCTCC...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CAA 90 bp GAGGCGGGACACCACGCCACGGAGGCGGTCACCAGGGAAGCTGGCTaGCTGTCTCTTCTGAGACACCCACAGGTTCTTCAGCAAGCTGCT +
Preference number: 2 (lower is better)
Translates to: EAGHHATEAVTREAG*LSLLRHPQVLQQAA
Trigger: AGCAGCTTGCTGAAGAACCTGTGGGTGTCTCAGAAGAGACAGCAAGCCAGCTTCCCTGGTGACCGCCTCCGTGGCGTGGTGTCCCGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR TCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGCAGGCTCCCTCCAGCTaGGCTCAGCCACGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEQAPSS*AQPRLQ
Trigger: CTGGAGCCGTGGCTGAGCTCAGCTGGAGGGAGCCTG...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGAGGGCAGGGGAGGAATaGGGAGCAAGAGGTAAACAC +
Preference number: 2 (lower is better)
Translates to: ASQGSISSRVAAWALATWRAGEE*GARGKH
Trigger: GTGTTTACCTCTTGCTCCTCATTCCTCCCCTGCCCT...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGAGGGCAGGGGAGGAATaGGGAGCAAGAGGTAAACAC +
Preference number: 2 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVRAGEE*GARGKH
Trigger: GTGTTTACCTCTTGCTCCTCATTCCTCCCCTGCCCT...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCACAGTCACTGGCGTTaGAGTCCTTTCTATCAGTGC +
Preference number: 2 (lower is better)
Translates to: DSVVERSGWLRDRARGQAHSHWR*SPFYQC
Trigger: GCACTGATAGAAAGGACTTCAACGCCAGTGACTGTG...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAGGGGCATCACAACACTaGGTACGGTGCCACCTCAGG +
Preference number: 2 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRGASQH*VRCHLR
Trigger: CCTGAGGTGGCACCGTACTCAGTGTTGTGATGCCCC...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCGAACACACAGCATCCTaGGACAGGACCAGCCCAAGG +
Preference number: 2 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTEHTAS*DRTSPR
Trigger: CCTTGGGCTGGTCCTGTCTCAGGATGCTGTGTGTTC...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR TCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTTCATGGGCGTCCACGTaGTCTCCATGTTGTTCTTTC +
Preference number: 2 (lower is better)
Translates to: PAELSHGSSSPTLVAPGASWAST*SPCCSF
Trigger: GAAAGAACAACATGGAGATCACGTGGACGCCCATGA...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR TCA 90 bp TTCCAGGTTGATTGTCTCCAGGTTGGGCTGCCGGACTCGGAAACGCCTAGGGGCCTCCGGAGTAACCGATaGCGGACTCTGGCTCAGGGC +
Preference number: 2 (lower is better)
Translates to: FQVDCLQVGLPDSETPRGLRSNR*RTLAQG
Trigger: GCCCTGAGCCAGAGTCCGTCATCGGTTACTCCGGAG...GCCCCTAGGCGTTTCCGAGTCCGGCAGCCCAACCTGGAGACAATCAACCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR GCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGGCATCCTTTGGAAATaGATTGGCCCAGAGGTGGTT +
Preference number: 2 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAGILWK*IGPEVV
Trigger: AACCACCTCTGGGCCAATGCATTTCCAAAGGATGCC...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp TTCCAGGTTGATTGTCTCCAGGTTGGGCTGCCGGACTCGGAAACGCCTAGGGGCGCCCTGGTCCCGCTCTaGCACCCCAAAGATGGTCAG +
Preference number: 2 (lower is better)
Translates to: FQVDCLQVGLPDSETPRGALVPL*HPKDGQ
Trigger: CTGACCATCTTTGGGGTGGCAGAGCGGGACCAGGGC...GCCCCTAGGCGTTTCCGAGTCCGGCAGCCCAACCTGGAGACAATCAACCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGCTCTCCCACACTGGTaGCACCCGGGGCTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIALPHW*HPGLKG
Trigger: CCCCTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGC...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGCTCTCCCACACTGGTaGCACCCGGGGCTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEALPHW*HPGLKG
Trigger: CCCCTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGC...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGTGGAACGCTCGGGGTaGCTGCGAGACCGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPVERSG*LRDRAR
Trigger: CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCAC...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGGGGCGGACAGTGTGGTaGAACGCTCGGGGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: WTGWVWPSIYILGFTSEEGRTVW*NARGGC
Trigger: GCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCC...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGGGCGGACAGTGTGGTaGAACGCTCGGGGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIGRTVW*NARGGC
Trigger: GCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCC...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCCCAAGGTGTCATGAGTaGGGAGCGGTGCCTTGTGCC +
Preference number: 2 (lower is better)
Translates to: LNSSPANPRVAACMGPAAPRCHE*GAVPCA
Trigger: GGCACAAGGCACCGCTCCCCACTCATGACACCTTGG...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CTGCCCCACCACGTAGCGAGAGCCCCACACTGTGACGTTGTTCCAGGCCTCTCGCCGGGGTACTTGGAATaGTCATGCCAGACCCCAGGT +
Preference number: 2 (lower is better)
Translates to: LPHHVARAPHCDVVPGLSPGYLE*SCQTPG
Trigger: ACCTGGGGTCTGGCATGACCATTCCAAGTACCCCGG...CGAGAGGCCTGGAACAACGTCACAGTGTGGGGCTCTCGCTACGTGGTGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATCCAATGAACCAGCCCTaGGTGGCGATGTCCGCTTGG +
Preference number: 2 (lower is better)
Translates to: GLVGGLVATGPHSLADPHPMNQP*VAMSAW
Trigger: CCAAGCGGACATCGCCACCCAGGGCTGGTTCATTGG...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR TCA 90 bp TGTGACGGCTTCCCCAGAGCCCACCTGCGTCCTGGCGCTGAGGGTAAAGCGGTAAACCAACAGAAAAGGTaGGCGTGTGCCGAGGCCAAG +
Preference number: 2 (lower is better)
Translates to: CDGFPRAHLRPGAEGKAVNQQKR*ACAEAK
Trigger: CTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTT...TACCGCTTTACCCTCAGCGCCAGGACGCAGGTGGGCTCTGGGGAAGCCGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR TCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGCCCAGCTCAGCAACTaGCAAGGCCGAGGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPAQLSN*QGRGRG
Trigger: CCCTCTGCCTCGGCCTTGTCAGTTGCTGAGCTGGGC...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGGCCCAGCTCAGCAACTaGCAAGGCCGAGGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVAQLSN*QGRGRG
Trigger: CCCTCTGCCTCGGCCTTGTCAGTTGCTGAGCTGGGC...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCCACAGTCACTGGCGTTaGAGTCCTTTCTATCAGTGC +
Preference number: 2 (lower is better)
Translates to: SISSRVAAWALATWTGALHSHWR*SPFYQC
Trigger: GCACTGATAGAAAGGACTTCAACGCCAGTGACTGTG...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCCCAAGACCAGACACCTaGTTTTCTTCTGCTGGAGGT +
Preference number: 2 (lower is better)
Translates to: SISSRVAAWALATWTGALPRPDT*FSSAGG
Trigger: ACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGG...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGCCTGGGTTTCACCAGTaGGGAGGCATGAAGTCCAAA +
Preference number: 2 (lower is better)
Translates to: ASQGSISSRVAAWALATWPGFHQ*GGMKSK
Trigger: TTTGGACTTCATGCCTCCTCACTGGTGAAACCCAGG...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GCAGGACACTGGAACGAGGTGCAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAGGGTGAGGACGTGTGTTaGGTGGCCACTTCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: AGHWNEVQRQAAGLLLPKGEDVC*VATSGP
Trigger: AGGACCAGAAGTGGCCACTCAACACACGTCCTCACC...CTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCGAACCTGCTGGCCACTaGGAAGGGATTCTCTGGCAC +
Preference number: 2 (lower is better)
Translates to: LNSSPANPRVAACMGPAAEPAGH*EGILWH
Trigger: GTGCCAGAGAATCCCTTCTCAGTGGCCAGCAGGTTC...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCCCTGACCCGGCCACTTaGCTGCAGGCACTGCCCTCG +
Preference number: 2 (lower is better)
Translates to: SSTACSETGSSLTLTSRGPDPAT*LQALPS
Trigger: CGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGG...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
3UTR-3UTR TCA 90 bp CTGCCCCACCACGTAGCGAGAGCCCCACACTGTGACGTTGTTCCAGGCCTCTCGTTAGTTGGAGTGGCCTaGTCAGCTAGCACGGTGAGG +
Preference number: 2 (lower is better)
Translates to: LPHHVARAPHCDVVPGLSLVGVA*SASTVR
Trigger: CCTCACCGTGCTAGCTGATCAGGCCACTCCAACTAA...CGAGAGGCCTGGAACAACGTCACAGTGTGGGGCTCTCGCTACGTGGTGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR GCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGGAAAAGGTGAGCGTGTaGCGAGGCCAAGGGCGGACA +
Preference number: 2 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVEKVSV*RGQGRT
Trigger: TGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTC...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCGGCATCCTTTGGAAATaGATTGGCCCAGAGGTGGTT +
Preference number: 2 (lower is better)
Translates to: SISSRVAAWALATWTGALGILWK*IGPEVV
Trigger: AACCACCTCTGGGCCAATGCATTTCCAAAGGATGCC...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCACCAGCAAAGCTTTTaGATCACAGGGTTCCATCTC +
Preference number: 2 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAHQQSF*ITGFHL
Trigger: GAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAAGGGCCTGCTTTCGGTaGAATGGGTACGCTGGCATG +
Preference number: 2 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRRACFR*NGYAGM
Trigger: CATGCCAGCGTACCCATTGCACCGAAAGCAGGCCCT...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp CAAGGTGGGAGGCAGCTGTCCCCTGACCGATGGCAGTGTACTTCCCGAACCCTGCTCATCGTCCCTTCCTaGCCTAAGGGCCTGCTTTCG +
Preference number: 2 (lower is better)
Translates to: QGGRQLSPDRWQCTSRTLLIVPS*PKGLLS
Trigger: CGAAAGCAGGCCCTTAGGGCAGGAAGGGACGATGAG...CAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTCCCACCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCTCCAGGTTGCTTCCTTaGCCATTCTTAAACCTCACA +
Preference number: 2 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLSRLLP*PFLNLT
Trigger: TGTGAGGTTTAAGAATGGGCAAGGAAGCAACCTGGA...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTTGGGAGGGGGCTTGTaGGTGGCTTGGTGGCTACTG +
Preference number: 2 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVLGGGL*VAWWLL
Trigger: CAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAA...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGCCAGCTCTCCCACACTaGTGGCACCCGGGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEPALPH*WHPGLK
Trigger: CTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGG...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGACAAGGGCGGACAGTGTaGTGGAACGCTCGGGGTGGC +
Preference number: 2 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRQGRTV*WNARGG
Trigger: GCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTG...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCCCTCTATCTACATCCTaGGTTTCACCAGTGAGGAGG +
Preference number: 2 (lower is better)
Translates to: SISSRVAAWALATWTGALPLSTS*VSPVRR
Trigger: CCTCCTCACTGGTGAAACCCAGGATGTAGATAGAGG...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCAGGTGCCCTCTACTCTaGACAGGGTGGGTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIRCPLL*TGWVWP
Trigger: GGGCCACACCCACCCTGTCCAGAGTAGAGGGCACCT...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCTGGGCCCTGGCCACGTaGACAGGTGCCCTCTACTCT +
Preference number: 2 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIWALAT*TGALYS
Trigger: AGAGTAGAGGGCACCTGTCCACGTGGCCAGGGCCCA...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGTGGCAGCATGGGCCCTaGCCACGTGGACAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWWQHGP*PRGQVP
Trigger: GGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCA...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAATGGCAGCATGGGCCCTaGCCACGTGGACAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQWQHGP*PRGQVP
Trigger: GGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCA...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATACCATCTCCTCGAGGGTaGCAGCATGGGCCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIPSPRG*QHGPWP
Trigger: TGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGG...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGGAGACCCAGCTGCCCAGGCCCCCTGGCTaGCAGCCGGAGAGGCTCAAA +
Preference number: 2 (lower is better)
Translates to: VLASLLVCLGVVAWETQLPRPPG*QPERLK
Trigger: TTTGAGCCTCTCCGGCTGCCAGCCAGGGGGCCTGGG...CAGCTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCGGACAGTACAGAGCCTaGCAGGACACTGGAACGAGG +
Preference number: 2 (lower is better)
Translates to: LNSSPANPRVAACMGPAAGQYRA*QDTGTR
Trigger: CCTCGTTCCAGTGTCCTGCCAGGCTCTGTACTGTCC...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 90 bp GGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: GRGLVGGLVATGPHS*ADPHIVPLLLKVVV
Trigger: CACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR CAA 90 bp GACAGACTGGAGCGCCGATGGCATGGTGCTGTCCTGGCTTCACTGTaGGTATGTCTTGGGGTAGTTGCTTGGGAGACCCAGCTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: DRLERRWHGAVLASL*VCLGVVAWETQLAG
Trigger: GCCTGCCAGCTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCATCGGCGCTCCAGTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 90 bp AAACGCCTAGGGGCACTGGGTACTCCTTCCGGGGTGGTGAACTCCTaGGTCTCACTGCGAGGCCCATCACCTCTCCCATTGACCACAACC +
Preference number: 2 (lower is better)
Translates to: KRLGALGTPSGVVNS*VSLRGPSPLPLTTT
Trigger: GGTTGTGGTCAATGGGAGAGGTGATGGGCCTCGCAGTGAGACCAAGGAGTTCACCACCCCGGAAGGAGTACCCAGTGCCCCTAGGCGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR TCA 90 bp TCGGACTTTAACTTCAGTGGGCGCAGCCCTGGGATAATCTTCTCCGGAGTAACCCAGGCTCCCTCCAGCTaGGCTCAGCCACGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: SDFNFSGRSPGIIFSGVTQAPSS*AQPRLQ
Trigger: CTGGAGCCGTGGCTGAGCTCAGCTGGAGGGAGCCTG...GGTTACTCCGGAGAAGATTATCCCAGGGCTGCGCCCACTGAAGTTAAAGTCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR TCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGCCCAGCTCAGCAACTaGCAAGGCCGAGGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMAQLSN*QGRGRG
Trigger: CCCTCTGCCTCGGCCTTGTCAGTTGCTGAGCTGGGC...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCAGGGCAGGGGAGGAATaGGGAGCAAGAGGTAAACAC +
Preference number: 2 (lower is better)
Translates to: LNSSPANPRVAACMGPAARAGEE*GARGKH
Trigger: GTGTTTACCTCTTGCTCCTCATTCCTCCCCTGCCCT...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp GCAGGACACTGGAACGAGGTGCAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAGGCATACAAAGAGCATTaGGTCCTCCCTAGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: AGHWNEVQRQAAGLLLPKAYKEH*VLPRWG
Trigger: CCCCCACCTAGGGAGGACTCAATGCTCTTTGTATGC...CTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACGCAGCACCTTCGGTCTaGGAACTGCAGGTCTGCGAG +
Preference number: 2 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHAAPSV*ELQVCE
Trigger: CTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGC...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCGCAGCACCTTCGGTCTaGGAACTGCAGGTCTGCGAG +
Preference number: 2 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIAAPSV*ELQVCE
Trigger: CTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGC...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTAACGCTCGGGGTGGCTaGGAGACCGGGCAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTNARGG*ETGQGA
Trigger: GGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTT...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCAGCAGCAAGGAGGCCTaGGCACCTTCTCCCTGCCAA +
Preference number: 2 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTSSKEA*APSPCQ
Trigger: TTGGCAGGGAGAAGGTGCGCAGGCCTCCTTGCTGCT...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTaGCCTCTACTCTGGACAGGG +
Preference number: 2 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPGHVDR*PLLWTG
Trigger: CCCTGTCCAGAGTAGAGGGCACCTGTCCACGTGGCC...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGGGCTCAGTTGCACCTTaGAGGGCAAGCAATGTTGGC +
Preference number: 2 (lower is better)
Translates to: MVKGGHWSDSARLAYASQGSVAP*RASNVG
Trigger: GCCAACATTGCTTGCCCTGCAAGGTGCAACTGAGCC...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCCTTGACTGCAGGCACTaGCCTCGGAACTGCCCCGGG +
Preference number: 2 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRLDCRH*PRNCPG
Trigger: CCCGGGGCAGTTCCGAGGGCAGTGCCTGCAGTCAAG...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
3UTR-3UTR GCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGCCAGCTGCACCGTGGTaGCCCTTCTGGCCACCTGGT +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWPAAPW*PFWPPG
Trigger: ACCAGGTGGCCAGAAGGGGCACCACGGTGCAGCTGG...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CCA 90 bp CAAGGTGGGAGGCAGCTGTCCCCTGACCGATGGCAGTGTACTTCCCGAACCCTGCTGGTCCTCACAGCTTaGCAGACCCCCATATCGTAC +
Preference number: 2 (lower is better)
Translates to: QGGRQLSPDRWQCTSRTLLVLTA*QTPISY
Trigger: GTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG...CAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTCCCACCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGGAGGGGGCTTGTGGGTaGCTTGGTGGCTACTGGTCC +
Preference number: 2 (lower is better)
Translates to: WTGWVWPSIYILGFTSEEEGACG*LGGYWS
Trigger: GGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTC...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGAGGGGGCTTGTGGGTaGCTTGGTGGCTACTGGTCC +
Preference number: 2 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPEGACG*LGGYWS
Trigger: GGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTC...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTCCAGCTCTCCCACACTaGTGGCACCCGGGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTPALPH*WHPGLK
Trigger: CTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGG...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACCAGCTCTCCCACACTaGTGGCACCCGGGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQPALPH*WHPGLK
Trigger: CTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGCAAGGGCGGACAGTGTaGTGGAACGCTCGGGGTGGC +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWQGRTV*WNARGG
Trigger: GCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTG...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCCTGATTTTCTTCTGCTaGAGGTACACAGTCACTGGC +
Preference number: 2 (lower is better)
Translates to: SISSRVAAWALATWTGALLIFFC*RYTVTG
Trigger: GCCAGTGACTGTGTACCTCCAGCAGAAGAAAATCAG...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCTCTATCTACATCCTaGGTTTCACCAGTGAGGAGG +
Preference number: 2 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVPLSTS*VSPVRR
Trigger: CCTCCTCACTGGTGAAACCCAGGATGTAGATAGAGG...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGAGGTGCCCTCTACTCTaGACAGGGTGGGTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVRCPLL*TGWVWP
Trigger: GGGCCACACCCACCCTGTCCAGAGTAGAGGGCACCT...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGAAGGTGCCCTCTACTCTaGACAGGGTGGGTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRRCPLL*TGWVWP
Trigger: GGGCCACACCCACCCTGTCCAGAGTAGAGGGCACCT...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATATGGGCCCTGGCCACGTaGACAGGTGCCCTCTACTCT +
Preference number: 2 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIWALAT*TGALYS
Trigger: AGAGTAGAGGGCACCTGTCCACGTGGCCAGGGCCCA...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGTGGCAGCATGGGCCCTaGCCACGTGGACAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: TKSIESSLGGGITTLSTVWQHGP*PRGQVP
Trigger: GGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCA...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GCAGGACACTGGAACGAGGTGCAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAGTTGAGTGGCCACTTCTaGTCCTGCCGGAACACTTGC +
Preference number: 2 (lower is better)
Translates to: AGHWNEVQRQAAGLLLPKLSGHF*SCRNTC
Trigger: GCAAGTGTTCCGGCAGGACCAGAAGTGGCCACTCAA...CTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGATTGAGTGGCCACTTCTaGTCCTGCCGGAACACTTGC +
Preference number: 2 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRLSGHF*SCRNTC
Trigger: GCAAGTGTTCCGGCAGGACCAGAAGTGGCCACTCAA...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGCAGCTGATCCATTCCTaGGGATCAGCTTCACCCTCC +
Preference number: 2 (lower is better)
Translates to: MVKGGHWSDSARLAYASQQLIHS*GSASPS
Trigger: GGAGGGTGAAGCTGATCCCCAGGAATGGATCAGCTG...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCTGGCTTGGACTCACATaGGGTAGCCCCTGTCTAGGT +
Preference number: 2 (lower is better)
Translates to: LNSSPANPRVAACMGPAAWLGLT*GSPCLG
Trigger: ACCTAGACAGGGGCTACCCCATGTGAGTCCAAGCCA...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATCTGCCACCCCAAAGATaGTCAGGGAGTCGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: GLVGGLVATGPHSLADPHLPPQR*SGSRLP
Trigger: AGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAG...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR CAA 90 bp GGAAGGGGAGCAGTGCCTTATGCCCCAAACACACCAGCAAAGCTTTaGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCC +
Preference number: 2 (lower is better)
Translates to: GRGAVPYAPNTPAKL*HHRVPSPRGWQHGP
Trigger: GGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTGTGTTTGGGGCATAAGGCACTGCTCCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CAA 90 bp GTGAGGACGTGTGTTGAGTGGCCACTTCTGGTCCTGCCGGAACACTaGCATAGGCTGCCCTGCTCTCCTGGAGATAGACGTTGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: VRTCVEWPLLVLPEH*HRLPCSPGDRRCWR
Trigger: CCTCCAGCAACGTCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTGGCCACTCAACACACGTCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CAA 90 bp TACGAGAGAAGCAGCCCTTCCCAGTCACCAGGTGGTGTGGCAGACTaGCTCATCGTCCCTTCCTGCCCTAAGGGCCTGCTTTCGGTGCAA +
Preference number: 2 (lower is better)
Translates to: YERSSPSQSPGGVAD*LIVPSCPKGLLSVQ
Trigger: TTGCACCGAAAGCAGGCCCTTAGGGCAGGAAGGGACGATGAGCAAGTCTGCCACACCACCTGGTGACTGGGAAGGGCTGCTTCTCTCGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCTGGGTTTCACCAGTaGGGAGGCATGAAGTCCAAA +
Preference number: 2 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRPGFHQ*GGMKSK
Trigger: TTTGGACTTCATGCCTCCTCACTGGTGAAACCCAGG...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGGCATACAAAGAGCATTaGGTCCTCCCTAGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVAYKEH*VLPRWG
Trigger: CCCCCACCTAGGGAGGACTCAATGCTCTTTGTATGC...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGATGTCTCCATTTGGGGTaGCTGGTGAGGACGTGTGTT +
Preference number: 2 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRCLHLG*LVRTCV
Trigger: AACACACGTCCTCACCAGTCACCCCAAATGGAGACA...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATGATCCCATTCCAGGTTaGTTGTCTCCAGGTTGGGCT +
Preference number: 2 (lower is better)
Translates to: GLVGGLVATGPHSLADPHDPIPG*LSPGWA
Trigger: AGCCCAACCTGGAGACAATCAACCTGGAATGGGATC...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR GCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGAGCAGCAAGGAGGCCTaGGCACCTTCTCCCTGCCAA +
Preference number: 2 (lower is better)
Translates to: LWTGWVWPSIYILGFTSESSKEA*APSPCQ
Trigger: TTGGCAGGGAGAAGGTGCGCAGGCCTCCTTGCTGCT...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGGCCACGTGGACAGGTaGCCTCTACTCTGGACAGGG +
Preference number: 2 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTGHVDR*PLLWTG
Trigger: CCCTGTCCAGAGTAGAGGGCACCTGTCCACGTGGCC...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGGGGAGCAGTGCCTTATaGCCCAAACACACCAGCAAA +
Preference number: 2 (lower is better)
Translates to: MVKGGHWSDSARLAYASQGSSAL*PKHTSK
Trigger: TTTGCTGGTGTGTTTGGGGCATAAGGCACTGCTCCC...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp CAAGGTGGGAGGCAGCTGTCCCCTGACCGATGGCAGTGTACTTCCCGAACCCTGATGAAAGGGCAGACCTaGTCAGTCTTGGGGCAAGTC +
Preference number: 2 (lower is better)
Translates to: QGGRQLSPDRWQCTSRTLMKGQT*SVLGQV
Trigger: GACTTGCCCCAAGACTGAGCAGGTCTGCCCTTTCAT...CAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTCCCACCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATTTGCATAGGCTGCCCTaGTCTCCTGGAGATAGACGT +
Preference number: 2 (lower is better)
Translates to: GLVGGLVATGPHSLADPHLHRLP*SPGDRR
Trigger: ACGTCTATCTCCAGGAGAGCAGGGCAGCCTATGCAA...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp CAAGGTGGGAGGCAGCTGTCCCCTGACCGATGGCAGTGTACTTCCCGAACCCTGTCAAATCGGAGGCTGTaGCCATGGCAGCTGATCCAT +
Preference number: 2 (lower is better)
Translates to: QGGRQLSPDRWQCTSRTLSNRRL*PWQLIH
Trigger: ATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGA...CAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTCCCACCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCTGCACTGTGATAAGCTaGCCCTCAGGCGTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTCTVIS*PSGVQA
Trigger: TGCCTGGACGCCTGAGGGGCAGCTTATCACAGTGCA...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGCACTGCCCTCGGAACTaGCCCGGGCCACTGCTTCTC +
Preference number: 2 (lower is better)
Translates to: STACSETGSSLTLTSRGKHCPRN*PGPLLL
Trigger: GAGAAGCAGTGGCCCGGGGCAGTTCCGAGGGCAGTG...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
3UTR-3UTR GCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGCTTGACTGCAGGCACTaGCCTCGGAACTGCCCCGGG +
Preference number: 2 (lower is better)
Translates to: STACSETGSSLTLTSRGKLDCRH*PRNCPG
Trigger: CCCGGGGCAGTTCCGAGGGCAGTGCCTGCAGTCAAG...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
3UTR-3UTR GCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCACCCGGCCACTTGACTaGAGGCACTGCCCTCGGAAC +
Preference number: 2 (lower is better)
Translates to: SSTACSETGSSLTLTSRGTRPLD*RHCPRN
Trigger: GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGT...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
3UTR-3UTR CCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGTGGCTTGGTGGCTACTaGTCCTCACAGCTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: PVTNRKGERVPRPRADSVWLGGY*SSQLGR
Trigger: TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTGGCTTGGTGGCTACTaGTCCTCACAGCTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVWLGGY*SSQLGR
Trigger: TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGGAGGGGGCTTGTGGGTaGCTTGGTGGCTACTGGTCC +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWEGACG*LGGYWS
Trigger: GGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTC...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGAGGGGGCTTGTGGGTaGCTTGGTGGCTACTGGTCC +
Preference number: 2 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMEGACG*LGGYWS
Trigger: GGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTC...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTGTGGAACGCTCGGGGTaGCTGCGAGACCGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTVERSG*LRDRAR
Trigger: CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCAC...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTGGGCGGACAGTGTGGTaGAACGCTCGGGGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: QGPLICIHPNERADLLSLGRTVW*NARGGC
Trigger: GCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCC...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAGGGCGGACAGTGTGGTaGAACGCTCGGGGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPGRTVW*NARGGC
Trigger: GCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCC...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGGCATTGGCCCAGAGGTaGTTTGAATATTACAGCCTG +
Preference number: 2 (lower is better)
Translates to: ASQGSISSRVAAWALATWALAQR*FEYYSL
Trigger: CAGGCTGTAATATTCAAACCACCTCTGGGCCAATGC...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGGCATTGGCCCAGAGGTaGTTTGAATATTACAGCCTG +
Preference number: 2 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVALAQR*FEYYSL
Trigger: CAGGCTGTAATATTCAAACCACCTCTGGGCCAATGC...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGGAGAAAGGCATCCTTTaGAAATGCATTGGCCCAGAG +
Preference number: 2 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVEKGIL*KCIGPE
Trigger: CTCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTC...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGAGGTGCCCTCTACTCTaGACAGGGTGGGTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWRCPLL*TGWVWP
Trigger: GGGCCACACCCACCCTGTCCAGAGTAGAGGGCACCT...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGTGGCAGCATGGGCCCTaGCCACGTGGACAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLWQHGP*PRGQVP
Trigger: GGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCA...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGCCATCTCCTCGAGGGTaGCAGCATGGGCCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: TKSIESSLGGGITTLSTVPSPRG*QHGPWP
Trigger: TGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGG...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACAGGACGTGTGTTGAGTaGCCACTTCTGGTCCTGCCG +
Preference number: 2 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHRTCVE*PLLVLP
Trigger: CGGCAGGACCAGAAGTGGCCACTCAACACACGTCCT...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGATGCTCCCAGCTCAATaGCCACTGTGTCCTAGCACT +
Preference number: 2 (lower is better)
Translates to: MVKGGHWSDSARLAYASQMLPAQ*PLCPST
Trigger: AGTGCTAGGACACAGTGGCCATTGAGCTGGGAGCAT...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGGCCTTGGCCAGGTCTTaGTCTAGCTCGGTGCTGGCG +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWALARS*SSSVLA
Trigger: CGCCAGCACCGAGCTAGACCAAGACCTGGCCAAGGC...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CCA 90 bp CTGCCCCACCACGTAGCGAGAGCCCCACACTGTGACGTTGTTCCAGGCCTCTCGTGCCAGACCCCAGGTTaGAACTGGTCTTCTTCAAAC +
Preference number: 2 (lower is better)
Translates to: LPHHVARAPHCDVVPGLSCQTPG*NWSSSN
Trigger: GTTTGAAGAAGACCAGTTCCAACCTGGGGTCTGGCA...CGAGAGGCCTGGAACAACGTCACAGTGTGGGGCTCTCGCTACGTGGTGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR CAA 90 bp TCTCAAGCCACACCGTGGTTCTTGACTGCTCTGTCCCGCCCAGCCTaGGTGACCAGATGGACCAAGCTCTCCCTCAGAATCCCTCTCTTC +
Preference number: 2 (lower is better)
Translates to: SQATPWFLTALSRPA*VTRWTKLSLRIPLF
Trigger: GAAGAGAGGGATTCTGAGGGAGAGCTTGGTCCATCTGGTCACCAAGGCTGGGCGGGACAGAGCAGTCAAGAACCACGGTGTGGCTTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 90 bp AGAGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTaGACTGCTCTGTCCCGCCCAGCCTTGGTGACCAGATGGACCAAG +
Preference number: 2 (lower is better)
Translates to: RGSGSRTVSQATPWF*TALSRPALVTRWTK
Trigger: CTTGGTCCATCTGGTCACCAAGGCTGGGCGGGACAGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 90 bp TGTATGTATGTGAGCATGCGTGGGCACTGGGTGTGGCAGGGGAGCTaGTCCGTTAGCTGGGAAACCCACACATCCTCGGGTTTCCACCGT +
Preference number: 2 (lower is better)
Translates to: CMYVSMRGHWVWQGS*SVSWETHTSSGFHR
Trigger: ACGGTGGAAACCCGAGGATGTGTGGGTTTCCCAGCTAACGGACAAGCTCCCCTGCCACACCCAGTGCCCACGCATGCTCACATACATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCAACCAACAGAAAAGGTaGGCGTGTGCCGAGGCCAAG +
Preference number: 2 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTNQQKR*ACAEAK
Trigger: CTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTT...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGCACAGTCACTGGCGTTaGAGTCCTTTCTATCAGTGC +
Preference number: 2 (lower is better)
Translates to: MVKGGHWSDSARLAYASQHSHWR*SPFYQC
Trigger: GCACTGATAGAAAGGACTTCAACGCCAGTGACTGTG...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATCCAAGACCAGACACCTaGTTTTCTTCTGCTGGAGGT +
Preference number: 2 (lower is better)
Translates to: GLVGGLVATGPHSLADPHPRPDT*FSSAGG
Trigger: ACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGG...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GCAGGACACTGGAACGAGGTGCAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAGATGTATACACCCCAATaGAAGGGCAGACCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: AGHWNEVQRQAAGLLLPKMYTPQ*KGRPAQ
Trigger: CTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACAT...CTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGGGGGCATCACAACACTaGGTACGGTGCCACCTCAGG +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWGASQH*VRCHLR
Trigger: CCTGAGGTGGCACCGTACTCAGTGTTGTGATGCCCC...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGGGGCATCACAACACTaGGTACGGTGCCACCTCAGG +
Preference number: 2 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTGASQH*VRCHLR
Trigger: CCTGAGGTGGCACCGTACTCAGTGTTGTGATGCCCC...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAGAAAAGGTGAGCGTGTaGCGAGGCCAAGGGCGGACA +
Preference number: 2 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQEKVSV*RGQGRT
Trigger: TGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTC...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGGGCCACGTGGACAGGTaGCCTCTACTCTGGACAGGG +
Preference number: 2 (lower is better)
Translates to: TKSIESSLGGGITTLSTVGHVDR*PLLWTG
Trigger: CCCTGTCCAGAGTAGAGGGCACCTGTCCACGTGGCC...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGATGGAAGGGGAGCAGTaGCTTATGCCCCAAACACAC +
Preference number: 2 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVMEGEQ*LMPQTH
Trigger: GTGTGTTTGGGGCATAAGGCACTGCTCCCCTTCCAT...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGGGAGCGGTGCCTTGTaGCGGCCTCCCAGGAACCTG +
Preference number: 2 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQGSGAL*RPPRNL
Trigger: CAGGTTCCTGGGAGGCCGGCACAAGGCACCGCTCCC...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGACTGCCCCGGGCCACTaGTTCTCTGGCTGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQTAPGH*FSGCWG
Trigger: TCCCCAGCAGCCAGAGAAGCAGTGGCCCGGGGCAGT...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
3UTR-3UTR GCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGCACTGCCCTCGGAACTaGCCCGGGCCACTGCTTCTC +
Preference number: 2 (lower is better)
Translates to: TACSETGSSLTLTSRGKKHCPRN*PGPLLL
Trigger: GAGAAGCAGTGGCCCGGGGCAGTTCCGAGGGCAGTG...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
3UTR-3UTR GCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGACCCGGCCACTTGACTaGAGGCACTGCCCTCGGAAC +
Preference number: 2 (lower is better)
Translates to: STACSETGSSLTLTSRGKTRPLD*RHCPRN
Trigger: GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGT...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
3UTR-3UTR GCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATCTTGGTTTTCAGCTTTaGCCAGGATGTTGGTGGCGA +
Preference number: 2 (lower is better)
Translates to: GLVGGLVATGPHSLADPHLGFQL*PGCWWR
Trigger: TCGCCACCAACATCCTGGGCAAAGCTGAAAACCAAG...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR GCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGATACTTGGAATGGTCATaGCAGACCCCAGGTTGGAAC +
Preference number: 2 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRYLEWS*QTPGWN
Trigger: GTTCCAACCTGGGGTCTGGCATGACCATTCCAAGTA...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGAGGCTTGTGGGTGGCTTaGTGGCTACTGGTCCTCACA +
Preference number: 2 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRGLWVA*WLLVLT
Trigger: TGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCC...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAATTGGGAGGGGGCTTGTaGGTGGCTTGGTGGCTACTG +
Preference number: 2 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQLGGGL*VAWWLL
Trigger: CAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAA...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTCCAGCTCTCCCACACTaGTGGCACCCGGGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: QGPLICIHPNERADLLSLPALPH*WHPGLK
Trigger: CTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGG...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTCAAGGGCGGACAGTGTaGTGGAACGCTCGGGGTGGC +
Preference number: 2 (lower is better)
Translates to: QGPLICIHPNERADLLSLQGRTV*WNARGG
Trigger: GCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTG...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTCAAGGGCGGACAGTGTaGTGGAACGCTCGGGGTGGC +
Preference number: 2 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTQGRTV*WNARGG
Trigger: GCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTG...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCTGTCTACGTGTTCTaGTATGGATTCAATCCTTTT +
Preference number: 2 (lower is better)
Translates to: DSVVERSGWLRDRARGQAPVYVF*YGFNPF
Trigger: AAAAGGATTGAATCCATACCAGAACACGTAGACAGG...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACACTGATTTTCTTCTGCTaGAGGTACACAGTCACTGGC +
Preference number: 2 (lower is better)
Translates to: SQGSISSRVAAWALATWTLIFFC*RYTVTG
Trigger: GCCAGTGACTGTGTACCTCCAGCAGAAGAAAATCAG...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAGGCTAGGTACCTTTaGTTTCAAAAATGCATTAGG +
Preference number: 2 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAEARYL*FQKCIR
Trigger: CCTAATGCATTTTTGAAACCAAAGGTACCTAGCCTC...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAACAGGGTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTGGGTGTGCGGAGGCTGTGCCCATaGCAGCTGATCCATTCCTGG +
Preference number: 2 (lower is better)
Translates to: QQGCGLLYVCEHAWALGVRRLCP*QLIHSW
Trigger: CCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCG...CACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCACAACCCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAACAGGGTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTGGGTGTGAGACTGGAGCGCCGATaGCATGGTGCTGTCCTGGCT +
Preference number: 2 (lower is better)
Translates to: QQGCGLLYVCEHAWALGVRLERR*HGAVLA
Trigger: AGCCAGGACAGCACCATGCCATCGGCGCTCCAGTCT...CACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCACAACCCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGAACCAACAGAAAAGGTaGGCGTGTGCCGAGGCCAAG +
Preference number: 2 (lower is better)
Translates to: WTGWVWPSIYILGFTSEENQQKR*ACAEAK
Trigger: CTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTT...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAAGGGCAGGGGAGGAATaGGGAGCAAGAGGTAAACAC +
Preference number: 2 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIRAGEE*GARGKH
Trigger: GTGTTTACCTCTTGCTCCTCATTCCTCCCCTGCCCT...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGCACAGTCACTGGCGTTaGAGTCCTTTCTATCAGTGC +
Preference number: 2 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVHSHWR*SPFYQC
Trigger: GCACTGATAGAAAGGACTTCAACGCCAGTGACTGTG...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGATGTATACACCCCAATaGAAGGGCAGACCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVMYTPQ*KGRPAQ
Trigger: CTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACAT...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGGCATACAAAGAGCATTaGGTCCTCCCTAGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVAYKEH*VLPRWG
Trigger: CCCCCACCTAGGGAGGACTCAATGCTCTTTGTATGC...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCTGTCTCCATTTGGGGTaGCTGGTGAGGACGTGTGTT +
Preference number: 2 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTCLHLG*LVRTCV
Trigger: AACACACGTCCTCACCAGTCACCCCAAATGGAGACA...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGTGTGCCCATGGCAGCTaGTCCATTCCTGGGGATCAG +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWCAHGS*SIPGDQ
Trigger: CTGATCCCCAGGAATGGATCAGCTGCCATGGGCACA...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GCAGGACACTGGAACGAGGTGCAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAGGAGTGTCTGAGAAACTaGCTACTCTGCTCAGATCCA +
Preference number: 2 (lower is better)
Translates to: AGHWNEVQRQAAGLLLPKECLRN*LLCSDP
Trigger: TGGATCTGAGCAGAGTAGTCAGTTTCTCAGACACTC...CTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCGAGTGTCTGAGAAACTaGCTACTCTGCTCAGATCCA +
Preference number: 2 (lower is better)
Translates to: LNSSPANPRVAACMGPAAECLRN*LLCSDP
Trigger: TGGATCTGAGCAGAGTAGTCAGTTTCTCAGACACTC...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp TCGGACTTTAACTTCAGTGGGCGCAGCCCTGGGATAATCTTCTCCGGAGTAACCTCCTGGTGGGGTCTTTaGCCTCCAGGCGGACTTGGT +
Preference number: 2 (lower is better)
Translates to: SDFNFSGRSPGIIFSGVTSWWGL*PPGGLG
Trigger: ACCAAGTCCGCCTGGAGGTCAAAGACCCCACCAGGA...GGTTACTCCGGAGAAGATTATCCCAGGGCTGCGCCCACTGAAGTTAAAGTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR GCA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTAAACGCTCGGGGTGGCTaGGAGACCGGGCAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: MHWPRGGLNITACLRVLVNARGG*ETGQGA
Trigger: GGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTT...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGAGCAGCAAGGAGGCCTaGGCACCTTCTCCCTGCCAA +
Preference number: 2 (lower is better)
Translates to: TKSIESSLGGGITTLSTVSSKEA*APSPCQ
Trigger: TTGGCAGGGAGAAGGTGCGCAGGCCTCCTTGCTGCT...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTGGCCACGTGGACAGGTaGCCTCTACTCTGGACAGGG +
Preference number: 2 (lower is better)
Translates to: QGPLICIHPNERADLLSLGHVDR*PLLWTG
Trigger: CCCTGTCCAGAGTAGAGGGCACCTGTCCACGTGGCC...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACATGGAAGGGGAGCAGTaGCTTATGCCCCAAACACAC +
Preference number: 2 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHMEGEQ*LMPQTH
Trigger: GTGTGTTTGGGGCATAAGGCACTGCTCCCCTTCCAT...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGTCCTGCCGGAACACTTaGATAGGCTGCCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWSCRNT*IGCPAL
Trigger: GAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGA...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGGGCCACTTCTGGTCCTaGCGGAACACTTGCATAGGC +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWGHFWS*RNTCIG
Trigger: GCCTATGCAAGTGTTCCGGCAGGACCAGAAGTGGCC...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp CAAGGTGGGAGGCAGCTGTCCCCTGACCGATGGCAGTGTACTTCCCGAACCCTGAGAGTTACTGTAAGATaGCCAGCACTTTCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: QGGRQLSPDRWQCTSRTLRVTVR*PALSSQ
Trigger: CTGGGAGGAAAGTGCTGGGCATCTTACAGTAACTCT...CAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTCCCACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAATGAGTGGGGAGCGGTaGCTTGTGCCGGCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQMSGER*LVPASQ
Trigger: CTGGGAGGCCGGCACAAGGCACCGCTCCCCACTCAT...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTACTCCTTGGTCTCACTaGGAGGCCCATCACCTCTCC +
Preference number: 2 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTTPWSH*EAHHLS
Trigger: GGAGAGGTGATGGGCCTCGCAGTGAGACCAAGGAGT...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGCTGGTCCTCACAGCTTaGCAGACCCCCATATCGTAC +
Preference number: 2 (lower is better)
Translates to: LWTGWVWPSIYILGFTSELVLTA*QTPISY
Trigger: GTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATACTGGTCCTCACAGCTTaGCAGACCCCCATATCGTAC +
Preference number: 2 (lower is better)
Translates to: HFWSCRNTCIGCPALLEILVLTA*QTPISY
Trigger: GTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGACTGGTCCTCACAGCTTaGCAGACCCCCATATCGTAC +
Preference number: 2 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRLVLTA*QTPISY
Trigger: GTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGCTGGTCCTCACAGCTTaGCAGACCCCCATATCGTAC +
Preference number: 2 (lower is better)
Translates to: WTGWVWPSIYILGFTSEELVLTA*QTPISY
Trigger: GTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTGAGGGGGCTTGTGGGTaGCTTGGTGGCTACTGGTCC +
Preference number: 2 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTEGACG*LGGYWS
Trigger: GGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTC...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTTTGGGAGGGGGCTTGTaGGTGGCTTGGTGGCTACTG +
Preference number: 2 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFLGGGL*VAWWLL
Trigger: CAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAA...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATAGAAAACAGAGACATTaGGTCTGGAGGGGAAGATGC +
Preference number: 2 (lower is better)
Translates to: GLVGGLVATGPHSLADPHRKQRH*VWRGRC
Trigger: GCATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCT...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCCCTGTCTACGTGTTCTaGTATGGATTCAATCCTTTT +
Preference number: 2 (lower is better)
Translates to: SISSRVAAWALATWTGALPVYVF*YGFNPF
Trigger: AAAAGGATTGAATCCATACCAGAACACGTAGACAGG...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGACTACTCTGGACAGGGTaGGTGTGGCCCTCTATCTAC +
Preference number: 2 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRLLWTG*VWPSIY
Trigger: GTAGATAGAGGGCCACACCCACCCTGTCCAGAGTAG...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGAAGACCTGCTCAGTCTTaGGGCAAGTCCCCATCCACA +
Preference number: 2 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRRPAQS*GKSPST
Trigger: TGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCT...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGGGAAGGACAGAGCCCTaGTCTGGCCCAGGCCCCCTG +
Preference number: 2 (lower is better)
Translates to: LTSEEYSTLKARCVTKQEGRTEP*SGPGPL
Trigger: CAGGGGGCCTGGGCCAGACCAGGGCTCTGTCCTTCC...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GCAGGACACTGGAACGAGGTGCAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAGCTCAGTTCTGGGCTATaGTTTCTTACCAGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: AGHWNEVQRQAAGLLLPKLSSGL*FLTSRE
Trigger: CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAG...CTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 90 bp TGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTaGGGAGACCCAGCTGGCAGGCAGTACTGGGCAATTCCACTTTCC +
Preference number: 2 (lower is better)
Translates to: WCCPGFTVGMSWGSC*GDPAGRQYWAIPLS
Trigger: GGAAAGTGGAATTGCCCAGTACTGCCTGCCAGCTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGAGCCCAGCTCAGCAACTaGCAAGGCCGAGGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRAQLSN*QGRGRG
Trigger: CCCTCTGCCTCGGCCTTGTCAGTTGCTGAGCTGGGC...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGAGGGCAGGGGAGGAATaGGGAGCAAGAGGTAAACAC +
Preference number: 2 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMRAGEE*GARGKH
Trigger: GTGTTTACCTCTTGCTCCTCATTCCTCCCCTGCCCT...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACATGTATACACCCCAATaGAAGGGCAGACCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHMYTPQ*KGRPAQ
Trigger: CTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACAT...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGACACCTCAGGGTCCCCTaGTATGTATACACCCCAATG +
Preference number: 2 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRHLRVP*YVYTPM
Trigger: CATTGGGGTGTATACATATCAGGGGACCCTGAGGTG...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGCATACAAAGAGCATTaGGTCCTCCCTAGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTAYKEH*VLPRWG
Trigger: CCCCCACCTAGGGAGGACTCAATGCTCTTTGTATGC...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGATTTGGGGTGACTGGTaGGGACGTGTGTTGAGTGGC +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWIWGDW*GRVLSG
Trigger: GCCACTCAACACACGTCCTCACCAGTCACCCCAAAT...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTACAGGCACACTTCCCTaGCATTCCCTTCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTTGTLP*HSLQGQ
Trigger: CTGTCCCTGAAGGGAATGTCAGGGAAGTGTGCCTGT...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAACCACACCGTGGTTCTTaGCTGCTCTGTCCCGCCCAG +
Preference number: 2 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQPHRGS*LLCPAQ
Trigger: CTGGGCGGGACAGAGCAGTCAAGAACCACGGTGTGG...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp CAAGGTGGGAGGCAGCTGTCCCCTGACCGATGGCAGTGTACTTCCCGAACCCTGAGTCCTTTCTATCAGTaGCCACTCCTGTTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: QGGRQLSPDRWQCTSRTLSPFYQ*PLLFLK
Trigger: TTTGAGGAACAGGAGTGGGCACTGATAGAAAGGACT...CAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTCCCACCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGATGAAAGGGCAGACCTaGTCAGTCTTGGGGCAAGTC +
Preference number: 2 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVMKGQT*SVLGQV
Trigger: GACTTGCCCCAAGACTGAGCAGGTCTGCCCTTTCAT...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTTCCTGCCGGAACACTTaGATAGGCTGCCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFSCRNT*IGCPAL
Trigger: GAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGA...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGGCTCTCTCTAGGTGCTaGCAACAGGAATTACCTAAA +
Preference number: 2 (lower is better)
Translates to: MVKGGHWSDSARLAYASQALSRC*QQELPK
Trigger: TTTAGGTAATTCCTGTTGGCAGCACCTAGAGAGAGC...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAACAGGGCCCTCCTCCATaGTACTCCTTGGCCACCACG +
Preference number: 2 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQQGPPP*YSLATT
Trigger: CGTGGTGGCCAAGGAGTAGCATGGAGGAGGGCCCTG...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTGGTAGGTCTGCAGTaGTTTTGTCTCCCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLVVGLQ*FCLPFS
Trigger: GGAGAAGGGGAGACAAAACCACTGCAGACCTACCAC...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGCTGGTCCTCACAGCTTaGCAGACCCCCATATCGTAC +
Preference number: 2 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMLVLTA*QTPISY
Trigger: GTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAATTGTGGGTGGCTTGGTaGCTACTGGTCCTCACAGCT +
Preference number: 2 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQLWVAW*LLVLTA
Trigger: AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAA...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CTTGCTGTCTCTTCTGAGACACCCACAGGTTCTTCAGCAAGCTGCTCTCCCTCCTTGTGGGTGGCTTGGTaGCTACTGGTCCTCACAGCT +
Preference number: 2 (lower is better)
Translates to: LAVSSETPTGSSASCSPSLWVAW*LLVLTA
Trigger: AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAA...GGAGGGAGAGCAGCTTGCTGAAGAACCTGTGGGTGTCTCAGAAGAGACAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CCA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTAGCTCTCCCACACTGGTaGCACCCGGGGCTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: MHWPRGGLNITACLRVLVALPHW*HPGLKG
Trigger: CCCCTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGC...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGCCAGCTCTCCCACACTaGTGGCACCCGGGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLPALPH*WHPGLK
Trigger: CTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGG...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGGTGGAACGCTCGGGGTaGCTGCGAGACCGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: PQCPTELAEKMISARDGRVERSG*LRDRAR
Trigger: CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCAC...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTGGGCGGACAGTGTGGTaGAACGCTCGGGGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: WPRGGLNITACLRVLVWIGRTVW*NARGGC
Trigger: GCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCC...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCTACGTGTTCTGGTATaGATTCAATCCTTTTTGCCT +
Preference number: 2 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVLRVLV*IQSFLP
Trigger: AGGCAAAAAGGATTGAATCCATACCAGAACACGTAG...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGCTGATTTTCTTCTGCTaGAGGTACACAGTCACTGGC +
Preference number: 2 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVLIFFC*RYTVTG
Trigger: GCCAGTGACTGTGTACCTCCAGCAGAAGAAAATCAG...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGAGACCTGCTCAGTCTTaGGGCAAGTCCCCATCCACA +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWRPAQS*GKSPST
Trigger: TGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCT...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTCAGCTGATCCATTCCTaGGGATCAGCTTCACCCTCC +
Preference number: 2 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTQLIHS*GSASPS
Trigger: GGAGGGTGAAGCTGATCCCCAGGAATGGATCAGCTG...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCTCTCCAAGACAATGTTaGAATCTGGATCGCTATCCC +
Preference number: 2 (lower is better)
Translates to: LNSSPANPRVAACMGPAASPRQC*NLDRYP
Trigger: GGGATAGCGATCCAGATTCCAACATTGTCTTGGAGA...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 90 bp GAATGCGCTATGTGGGCTCAGTTGCACCTTGCAGGGCAAGCAATGTaGGCACTGGCTGATTTTCAGACCTGTGGTCACCTCTCCCGACTT +
Preference number: 2 (lower is better)
Translates to: ECAMWAQLHLAGQAM*ALADFQTCGHLSRL
Trigger: AAGTCGGGAGAGGTGACCACAGGTCTGAAAATCAGCCAGTGCCAACATTGCTTGCCCTGCAAGGTGCAACTGAGCCCACATAGCGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp CAACAGGGTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTGGGTGTGTCGTACCCTTGTTACTaGAGGTGGTGGTGGCTTCGT +
Preference number: 2 (lower is better)
Translates to: QQGCGLLYVCEHAWALGVSYPCY*RWWWLR
Trigger: ACGAAGCCACCACCACCTTCAGTAACAAGGGTACGA...CACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCACAACCCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTCAGGCTCCCTCCAGCTaGGCTCAGCCACGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLQAPSS*AQPRLQ
Trigger: CTGGAGCCGTGGCTGAGCTCAGCTGGAGGGAGCCTG...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGAACCAACAGAAAAGGTaGGCGTGTGCCGAGGCCAAG +
Preference number: 2 (lower is better)
Translates to: TKSIESSLGGGITTLSTVNQQKR*ACAEAK
Trigger: CTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTT...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGGCCCAGCTCAGCAACTaGCAAGGCCGAGGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: PQCPTELAEKMISARDGRAQLSN*QGRGRG
Trigger: CCCTCTGCCTCGGCCTTGTCAGTTGCTGAGCTGGGC...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTAGGGCAGGGGAGGAATaGGGAGCAAGAGGTAAACAC +
Preference number: 2 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFRAGEE*GARGKH
Trigger: GTGTTTACCTCTTGCTCCTCATTCCTCCCCTGCCCT...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATACACAGTCACTGGCGTTaGAGTCCTTTCTATCAGTGC +
Preference number: 2 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIHSHWR*SPFYQC
Trigger: GCACTGATAGAAAGGACTTCAACGCCAGTGACTGTG...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGCACCTCAGGGTCCCCTaGTATGTATACACCCCAATG +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWHLRVP*YVYTPM
Trigger: CATTGGGGTGTATACATATCAGGGGACCCTGAGGTG...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGGGGCATCACAACACTaGGTACGGTGCCACCTCAGG +
Preference number: 2 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQGASQH*VRCHLR
Trigger: CCTGAGGTGGCACCGTACTCAGTGTTGTGATGCCCC...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGATATGGAATGAGTGTCTaGGAAACTGACTACTCTGCT +
Preference number: 2 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRYGMSV*ETDYSA
Trigger: AGCAGAGTAGTCAGTTTCTCAGACACTCATTCCATA...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCATCCTTTGGAAATaGATTGGCCCAGAGGTGGTT +
Preference number: 2 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPGILWK*IGPEVV
Trigger: AACCACCTCTGGGCCAATGCATTTCCAAAGGATGCC...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp GCAGGACACTGGAACGAGGTGCAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAGTGCGCACCTTCTCCCTaGCAAAAATACTGTCATTTT +
Preference number: 2 (lower is better)
Translates to: AGHWNEVQRQAAGLLLPKCAPSP*QKYCHF
Trigger: AAAATGACAGTATTTTTGGCAGGGAGAAGGTGCGCA...CTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGGGGAGCAGTGCCTTATaGCCCAAACACACCAGCAAA +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWGSSAL*PKHTSK
Trigger: TTTGCTGGTGTGTTTGGGGCATAAGGCACTGCTCCC...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAGGGAGCAGTGCCTTATaGCCCAAACACACCAGCAAA +
Preference number: 2 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQGSSAL*PKHTSK
Trigger: TTTGCTGGTGTGTTTGGGGCATAAGGCACTGCTCCC...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAAGGGAGCAGTGCCTTATaGCCCAAACACACCAGCAAA +
Preference number: 2 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQGSSAL*PKHTSK
Trigger: TTTGCTGGTGTGTTTGGGGCATAAGGCACTGCTCCC...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGTCCTGCCGGAACACTTaGATAGGCTGCCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLSCRNT*IGCPAL
Trigger: GAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGA...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAACAGGGTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTGGGTGTGGTGGTAGGTCTGCAGTaGTTTTGTCTCCCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: QQGCGLLYVCEHAWALGVVVGLQ*FCLPFS
Trigger: GGAGAAGGGGAGACAAAACCACTGCAGACCTACCAC...CACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCACAACCCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGCTGGTCCTCACAGCTTaGCAGACCCCCATATCGTAC +
Preference number: 2 (lower is better)
Translates to: TKSIESSLGGGITTLSTVLVLTA*QTPISY
Trigger: GTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTTGGCTTGGTGGCTACTaGTCCTCACAGCTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFWLGGY*SSQLGR
Trigger: TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCCCAGCTCTCCCACACTaGTGGCACCCGGGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPPALPH*WHPGLK
Trigger: CTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGG...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTGGGCGGACAGTGTGGTaGAACGCTCGGGGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLGRTVW*NARGGC
Trigger: GCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCC...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGACAGAGACATTGGGTCTaGAGGGGAAGATGCACAAAG +
Preference number: 2 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRQRHWV*RGRCTK
Trigger: CTTTGTGCATCTTCCCCTCCAGACCCAATGTCTCTG...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCGCATTGGCCCAGAGGTaGTTTGAATATTACAGCCTG +
Preference number: 2 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIALAQR*FEYYSL
Trigger: CAGGCTGTAATATTCAAACCACCTCTGGGCCAATGC...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTCCTCTATCTACATCCTaGGTTTCACCAGTGAGGAGG +
Preference number: 2 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPPLSTS*VSPVRR
Trigger: CCTCCTCACTGGTGAAACCCAGGATGTAGATAGAGG...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGCTACTCTGGACAGGGTaGGTGTGGCCCTCTATCTAC +
Preference number: 2 (lower is better)
Translates to: TKSIESSLGGGITTLSTVLLWTG*VWPSIY
Trigger: GTAGATAGAGGGCCACACCCACCCTGTCCAGAGTAG...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGCCATCTCCTCGAGGGTaGCAGCATGGGCCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: PQCPTELAEKMISARDGRPSPRG*QHGPWP
Trigger: TGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGG...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAACGGAGGCTGTGCCCATaGCAGCTGATCCATTCCTGG +
Preference number: 2 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQRRLCP*QLIHSW
Trigger: CCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCG...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGATGTACGGTGCAGTATaGAATGAGTGTCTGAGAAAC +
Preference number: 2 (lower is better)
Translates to: MVKGGHWSDSARLAYASQMYGAV*NECLRN
Trigger: GTTTCTCAGACACTCATTCCATACTGCACCGTACAT...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGCCCAGCCAGACAGACTaGAGCGCCGATGGCATGGTG +
Preference number: 2 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLPSQTD*SADGMV
Trigger: CACCATGCCATCGGCGCTCCAGTCTGTCTGGCTGGG...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGCGTGGGCACTGGGTGTaGCAGGGGAGCTTGTCCGTT +
Preference number: 2 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLRGHWV*QGSLSV
Trigger: AACGGACAAGCTCCCCTGCCACACCCAGTGCCCACG...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 90 bp TCTTCAGGGCCAAGGGGAACATCCTTCTTTTCTCGTACTGGGTACTaGCCGCCGCGACTCCTCTTGATGAAACAGACGATGAGCAGGATC +
Preference number: 2 (lower is better)
Translates to: SSGPRGTSFFSRTGY*PPRLLLMKQTMSRI
Trigger: GATCCTGCTCATCGTCTGTTTCATCAAGAGGAGTCGCGGCGGCAAGTACCCAGTACGAGAAAAGAAGGATGTTCCCCTTGGCCCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR TCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGCAGGCTCCCTCCAGCTaGGCTCAGCCACGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGQAPSS*AQPRLQ
Trigger: CTGGAGCCGTGGCTGAGCTCAGCTGGAGGGAGCCTG...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGAACCAACAGAAAAGGTaGGCGTGTGCCGAGGCCAAG +
Preference number: 2 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLNQQKR*ACAEAK
Trigger: CTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTT...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGCCAAGACCAGACACCTaGTTTTCTTCTGCTGGAGGT +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWPRPDT*FSSAGG
Trigger: ACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGG...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp AGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTGCTCTCCTGGGTTTCACCAGTaGGGAGGCATGAAGTCCAAA +
Preference number: 2 (lower is better)
Translates to: RLRKQDCFSSHTVVLDCSPGFHQ*GGMKSK
Trigger: TTTGGACTTCATGCCTCCTCACTGGTGAAACCCAGG...AGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCAATTGGCTGAGAAGATaGTATCTGCTAGAGATGGAA +
Preference number: 2 (lower is better)
Translates to: LNSSPANPRVAACMGPAANWLRR*YLLEME
Trigger: TTCCATCTCTAGCAGATATCATCTTCTCAGCCAATT...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGACAGGCACACTTCCCTaGCATTCCCTTCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLTGTLP*HSLQGQ
Trigger: CTGTCCCTGAAGGGAATGTCAGGGAAGTGTGCCTGT...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGGAAAAGGTGAGCGTGTaGCGAGGCCAAGGGCGGACA +
Preference number: 2 (lower is better)
Translates to: LTSEEYSTLKARCVTKQEEKVSV*RGQGRT
Trigger: TGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTC...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp CAACAGGGTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTGGGTGTGGGCATCCTTTGGAAATaGATTGGCCCAGAGGTGGTT +
Preference number: 2 (lower is better)
Translates to: QQGCGLLYVCEHAWALGVGILWK*IGPEVV
Trigger: AACCACCTCTGGGCCAATGCATTTCCAAAGGATGCC...CACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCACAACCCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGGGCATCCTTTGGAAATaGATTGGCCCAGAGGTGGTT +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWGILWK*IGPEVV
Trigger: AACCACCTCTGGGCCAATGCATTTCCAAAGGATGCC...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAAGGCATCCTTTGGAAATaGATTGGCCCAGAGGTGGTT +
Preference number: 2 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQGILWK*IGPEVV
Trigger: AACCACCTCTGGGCCAATGCATTTCCAAAGGATGCC...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCAGTCCTTTCTATCAGTaGCCACTCCTGTTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTSPFYQ*PLLFLK
Trigger: TTTGAGGAACAGGAGTGGGCACTGATAGAAAGGACT...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGCACCAGCAAAGCTTTTaGATCACAGGGTTCCATCTC +
Preference number: 2 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVHQQSF*ITGFHL
Trigger: GAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGGGGACAGATCAGCGCTaGATAAGGCATACAAAGAGC +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWGTDQR*IRHTKS
Trigger: GCTCTTTGTATGCCTTATGCAGCGCTGATCTGTCCC...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp CAACAGGGTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTGGGTGTGGGGACAGATCAGCGCTaGATAAGGCATACAAAGAGC +
Preference number: 2 (lower is better)
Translates to: QQGCGLLYVCEHAWALGVGTDQR*IRHTKS
Trigger: GCTCTTTGTATGCCTTATGCAGCGCTGATCTGTCCC...CACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCACAACCCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTAACACTTGCATAGGCTaGCCTGCTCTCCTGGAGATA +
Preference number: 2 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTNTCIG*PALLEI
Trigger: TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTT...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAACCTGCCCTAAGGGCCTaGTTTCGGTGCAATGGGTAC +
Preference number: 2 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQPALRA*FRCNGY
Trigger: GTACCCATTGCACCGAAAGCAGGCCCTTAGGGCAGG...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGTGGTAGGTCTGCAGTaGTTTTGTCTCCCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFVVGLQ*FCLPFS
Trigger: GGAGAAGGGGAGACAAAACCACTGCAGACCTACCAC...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGATTGGGAGGGGGCTTGTaGGTGGCTTGGTGGCTACTG +
Preference number: 2 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRLGGGL*VAWWLL
Trigger: CAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAA...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGTTGGGAGGGGGCTTGTaGGTGGCTTGGTGGCTACTG +
Preference number: 2 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLLGGGL*VAWWLL
Trigger: CAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAA...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGCCAGCTCTCCCACACTaGTGGCACCCGGGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: FKQPYWLSSGLWFLTSREPALPH*WHPGLK
Trigger: CTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGG...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGCAAGGGCGGACAGTGTaGTGGAACGCTCGGGGTGGC +
Preference number: 2 (lower is better)
Translates to: FKQPYWLSSGLWFLTSREQGRTV*WNARGG
Trigger: GCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTG...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAACAGAGACATTGGGTCTaGAGGGGAAGATGCACAAAG +
Preference number: 2 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQQRHWV*RGRCTK
Trigger: CTTTGTGCATCTTCCCCTCCAGACCCAATGTCTCTG...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGCTACGTGTTCTGGTATaGATTCAATCCTTTTTGCCT +
Preference number: 2 (lower is better)
Translates to: MVKGGHWSDSARLAYASQLRVLV*IQSFLP
Trigger: AGGCAAAAAGGATTGAATCCATACCAGAACACGTAG...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGGCATTGGCCCAGAGGTaGTTTGAATATTACAGCCTG +
Preference number: 2 (lower is better)
Translates to: WTGWVWPSIYILGFTSEEALAQR*FEYYSL
Trigger: CAGGCTGTAATATTCAAACCACCTCTGGGCCAATGC...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGCATTGGCCCAGAGGTaGTTTGAATATTACAGCCTG +
Preference number: 2 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIALAQR*FEYYSL
Trigger: CAGGCTGTAATATTCAAACCACCTCTGGGCCAATGC...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTCTACTCTGGACAGGGTaGGTGTGGCCCTCTATCTAC +
Preference number: 2 (lower is better)
Translates to: QGPLICIHPNERADLLSLLLWTG*VWPSIY
Trigger: GTAGATAGAGGGCCACACCCACCCTGTCCAGAGTAG...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATGAGGCTAGGTACCTTTaGTTTCAAAAATGCATTAGG +
Preference number: 2 (lower is better)
Translates to: GLVGGLVATGPHSLADPHEARYL*FQKCIR
Trigger: CCTAATGCATTTTTGAAACCAAAGGTACCTAGCCTC...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GCAGGACACTGGAACGAGGTGCAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAGGAGGCTAGGTACCTTTaGTTTCAAAAATGCATTAGG +
Preference number: 2 (lower is better)
Translates to: AGHWNEVQRQAAGLLLPKEARYL*FQKCIR
Trigger: CCTAATGCATTTTTGAAACCAAAGGTACCTAGCCTC...CTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGGAGACCCAGCTGGAGTGGACTCTGACATaGGCTCCATGGAAAATGCAC +
Preference number: 2 (lower is better)
Translates to: VLASLLVCLGVVAWETQLEWTLT*APWKMH
Trigger: GTGCATTTTCCATGGAGCCCATGTCAGAGTCCACTC...CAGCTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGAACAGGGCCCAACCCTaGTGGCCTTTCCCACTCCTC +
Preference number: 2 (lower is better)
Translates to: LTSEEYSTLKARCVTKQENRAQP*WPFPLL
Trigger: GAGGAGTGGGAAAGGCCACCAGGGTTGGGCCCTGTT...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 90 bp GTGGTCAGGGAAACTATGAATGCGCTATGTGGGCTCAGTTGCACCTaGCAGGGCAAGCAATGTTGGCACTGGCTGATTTTCAGACCTGTG +
Preference number: 2 (lower is better)
Translates to: VVRETMNALCGLSCT*QGKQCWHWLIFRPV
Trigger: CACAGGTCTGAAAATCAGCCAGTGCCAACATTGCTTGCCCTGCAAGGTGCAACTGAGCCCACATAGCGCATTCATAGTTTCCCTGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 90 bp CAAGGCTGTGGTCAGGGAAACTATGAATGCGCTATGTGGGCTCAGTaGCACCTTGCAGGGCAAGCAATGTTGGCACTGGCTGATTTTCAG +
Preference number: 2 (lower is better)
Translates to: QGCGQGNYECAMWAQ*HLAGQAMLALADFQ
Trigger: CTGAAAATCAGCCAGTGCCAACATTGCTTGCCCTGCAAGGTGCAACTGAGCCCACATAGCGCATTCATAGTTTCCCTGACCACAGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGCCCAGAGGTGGTTTaGATATTACAGCCTGTCTAC +
Preference number: 2 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFGPEVV*ILQPVY
Trigger: GTAGACAGGCTGTAATATTCAAACCACCTCTGGGCC...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGAATTGGCTGAGAAGATaGTATCTGCTAGAGATGGAA +
Preference number: 2 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVNWLRR*YLLEME
Trigger: TTCCATCTCTAGCAGATATCATCTTCTCAGCCAATT...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGATGTATACACCCCAATaGAAGGGCAGACCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: TKSIESSLGGGITTLSTVMYTPQ*KGRPAQ
Trigger: CTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACAT...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTGGGAGGGCACTGGTCTaGCTCTGCCCGGCTTGCCTA +
Preference number: 2 (lower is better)
Translates to: RLITDRLILVSETILFVFGRALV*LCPACL
Trigger: TAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCC...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCGAAAAGGTGAGCGTGTaGCGAGGCCAAGGGCGGACA +
Preference number: 2 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPEKVSV*RGQGRT
Trigger: TGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTC...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCTGCGCACCTTCTCCCTaGCAAAAATACTGTCATTTT +
Preference number: 2 (lower is better)
Translates to: ERLKSEAVPMAADPFLGICAPSP*QKYCHF
Trigger: AAAATGACAGTATTTTTGGCAGGGAGAAGGTGCGCA...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGAAGTCCTTTCTATCAGTaGCCACTCCTGTTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRSPFYQ*PLLFLK
Trigger: TTTGAGGAACAGGAGTGGGCACTGATAGAAAGGACT...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGGGCCACGTGGACAGGTaGCCTCTACTCTGGACAGGG +
Preference number: 2 (lower is better)
Translates to: FKQPYWLSSGLWFLTSREGHVDR*PLLWTG
Trigger: CCCTGTCCAGAGTAGAGGGCACCTGTCCACGTGGCC...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp AGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTGCTCTAACACTTGCATAGGCTaGCCTGCTCTCCTGGAGATA +
Preference number: 2 (lower is better)
Translates to: RLRKQDCFSSHTVVLDCSNTCIG*PALLEI
Trigger: TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTT...AGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGACCGTGGTTCTTGACTaGTCTGTCCCGCCCAGCCTT +
Preference number: 2 (lower is better)
Translates to: LTSEEYSTLKARCVTKQETVVLD*SVPPSL
Trigger: AAGGCTGGGCGGGACAGAGCAGTCAAGAACCACGGT...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTCCTAAGACTTGGCCCTaGTCCAGCACAGGGCGCCAG +
Preference number: 2 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLPKTWP*SSTGRQ
Trigger: CTGGCGCCCTGTGCTGGAGCAGGGCCAAGTCTTAGG...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTGTGGTAGGTCTGCAGTaGTTTTGTCTCCCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: QGPLICIHPNERADLLSLVVGLQ*FCLPFS
Trigger: GGAGAAGGGGAGACAAAACCACTGCAGACCTACCAC...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGCAGAGACATTGGGTCTaGAGGGGAAGATGCACAAAG +
Preference number: 2 (lower is better)
Translates to: TKSIESSLGGGITTLSTVQRHWV*RGRCTK
Trigger: CTTTGTGCATCTTCCCCTCCAGACCCAATGTCTCTG...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAAAGAAAACAGAGACATTaGGTCTGGAGGGGAAGATGC +
Preference number: 2 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQRKQRH*VWRGRC
Trigger: GCATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCT...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAAGAAAACAGAGACATTaGGTCTGGAGGGGAAGATGC +
Preference number: 2 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQRKQRH*VWRGRC
Trigger: GCATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCT...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGGCATTGGCCCAGAGGTaGTTTGAATATTACAGCCTG +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWALAQR*FEYYSL
Trigger: CAGGCTGTAATATTCAAACCACCTCTGGGCCAATGC...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGCATTGGCCCAGAGGTaGTTTGAATATTACAGCCTG +
Preference number: 2 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMALAQR*FEYYSL
Trigger: CAGGCTGTAATATTCAAACCACCTCTGGGCCAATGC...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAAGAGAAAGGCATCCTTTaGAAATGCATTGGCCCAGAG +
Preference number: 2 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQEKGIL*KCIGPE
Trigger: CTCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTC...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAGAAAGGCATCCTTTaGAAATGCATTGGCCCAGAG +
Preference number: 2 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTEKGIL*KCIGPE
Trigger: CTCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTC...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAGAGAAAGGCATCCTTTaGAAATGCATTGGCCCAGAG +
Preference number: 2 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQEKGIL*KCIGPE
Trigger: CTCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTC...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGCTGATTTTCTTCTGCTaGAGGTACACAGTCACTGGC +
Preference number: 2 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMLIFFC*RYTVTG
Trigger: GCCAGTGACTGTGTACCTCCAGCAGAAGAAAATCAG...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTAGGTGCCCTCTACTCTaGACAGGGTGGGTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLRCPLL*TGWVWP
Trigger: GGGCCACACCCACCCTGTCCAGAGTAGAGGGCACCT...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGCTTGGGAGACCCAGCTaGCAGGCAGTACTGGGCAAT +
Preference number: 2 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLLGRPS*QAVLGN
Trigger: ATTGCCCAGTACTGCCTGCCAGCTGGGTCTCCCAAG...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 90 bp GGCCAGGGGAGGCATATGGCGAGAAAGGCATCCTTTGGAAATGCATaGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCT +
Preference number: 2 (lower is better)
Translates to: GQGRHMARKASFGNA*AQRWFEYYSLSTCS
Trigger: AGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTCGCCATATGCCTCCCCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CAA 90 bp GACTCTGCCCGGCTTGCCTATGCCTCCCAGGGCCTTGGTCTCCTCTaGACATATCAAGCTCTTTGTTTCATTGTTTTGAGGCCTCTCTAT +
Preference number: 2 (lower is better)
Translates to: DSARLAYASQGLGLL*TYQALCFIVLRPLY
Trigger: ATAGAGAGGCCTCAAAACAATGAAACAAAGAGCTTGATATGTCAAGAGGAGACCAAGGCCCTGGGAGGCATAGGCAAGCCGGGCAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAATCGTACCCTTGTTACTaGAGGTGGTGGTGGCTTCGT +
Preference number: 2 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQSYPCY*RWWWLR
Trigger: ACGAAGCCACCACCACCTTCAGTAACAAGGGTACGA...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGGCCCAGAGGTGGTTTaGATATTACAGCCTGTCTAC +
Preference number: 2 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLGPEVV*ILQPVY
Trigger: GTAGACAGGCTGTAATATTCAAACCACCTCTGGGCC...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCGCATACAAAGAGCATTaGGTCCTCCCTAGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSAYKEH*VLPRWG
Trigger: CCCCCACCTAGGGAGGACTCAATGCTCTTTGTATGC...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTGGACTGTCAGCCCCATaGGGGCAGGGACCACATCTA +
Preference number: 2 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLGLSAP*GQGPHL
Trigger: TAGATGTGGTCCCTGCCCTCATGGGGCTGACAGTCC...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATATGCGCACCTTCTCCCTaGCAAAAATACTGTCATTTT +
Preference number: 2 (lower is better)
Translates to: HFWSCRNTCIGCPALLEICAPSP*QKYCHF
Trigger: AAAATGACAGTATTTTTGGCAGGGAGAAGGTGCGCA...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGAGCAGCAAGGAGGCCTaGGCACCTTCTCCCTGCCAA +
Preference number: 2 (lower is better)
Translates to: FKQPYWLSSGLWFLTSRESSKEA*APSPCQ
Trigger: TTGGCAGGGAGAAGGTGCGCAGGCCTCCTTGCTGCT...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCCGTCTTCAGAGTCAATaGAGCTCACATCTTAGATAT +
Preference number: 2 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTRLQSQ*SSHLRY
Trigger: ATATCTAAGATGTGAGCTGCATTGACTCTGAAGACG...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGGGACAGATCAGCGCTaGATAAGGCATACAAAGAGC +
Preference number: 2 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLGTDQR*IRHTKS
Trigger: GCTCTTTGTATGCCTTATGCAGCGCTGATCTGTCCC...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAACATGTGGCAAATGTTaGTTTAATAAAGTCACGGAA +
Preference number: 2 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRTCGKC*FNKVTE
Trigger: TTCCGTGACTTTATTAAAGCAACATTTGCCACATGT...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGATTGTGGGTGGCTTGGTaGCTACTGGTCCTCACAGCT +
Preference number: 2 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRLWVAW*LLVLTA
Trigger: AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAA...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGGGCTTGTGGGTGGCTTaGTGGCTACTGGTCCTCACA +
Preference number: 2 (lower is better)
Translates to: PQCPTELAEKMISARDGRGLWVA*WLLVLT
Trigger: TGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCC...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCGGCTTGTGGGTGGCTTaGTGGCTACTGGTCCTCACA +
Preference number: 2 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPGLWVA*WLLVLT
Trigger: TGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCC...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGGAGGGGGCTTGTGGGTaGCTTGGTGGCTACTGGTCC +
Preference number: 2 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGEGACG*LGGYWS
Trigger: GGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTC...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 21 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGTGGAACGCTCGGGGTaGCTGCGAGACCGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKVERSG*LRDRAR
Trigger: CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCAC...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTAGAAAACAGAGACATTaGGTCTGGAGGGGAAGATGC +
Preference number: 2 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSRKQRH*VWRGRC
Trigger: GCATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCT...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCCTACGTGTTCTGGTATaGATTCAATCCTTTTTGCCT +
Preference number: 2 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTLRVLV*IQSFLP
Trigger: AGGCAAAAAGGATTGAATCCATACCAGAACACGTAG...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGCATTGGCCCAGAGGTaGTTTGAATATTACAGCCTG +
Preference number: 2 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFALAQR*FEYYSL
Trigger: CAGGCTGTAATATTCAAACCACCTCTGGGCCAATGC...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCCACAGAACAGCAGCCTGAGAGAGGGCTAACAGCATTTTCTTCATACACAAAGCTACTCTGGACAGGGTaGGTGTGGCCCTCTATCTAC +
Preference number: 2 (lower is better)
Translates to: PTEQQPERGLTAFSSYTKLLWTG*VWPSIY
Trigger: GTAGATAGAGGGCCACACCCACCCTGTCCAGAGTAG...CTTTGTGTATGAAGAAAATGCTGTTAGCCCTCTCTCAGGCTGCTGTTCTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGTTGAGTGGCCACTTCTaGTCCTGCCGGAACACTTGC +
Preference number: 2 (lower is better)
Translates to: LTSEEYSTLKARCVTKQELSGHF*SCRNTC
Trigger: GCAAGTGTTCCGGCAGGACCAGAAGTGGCCACTCAA...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCGAGGCTAGGTACCTTTaGTTTCAAAAATGCATTAGG +
Preference number: 2 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTEARYL*FQKCIR
Trigger: CCTAATGCATTTTTGAAACCAAAGGTACCTAGCCTC...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCGAGGCTAGGTACCTTTaGTTTCAAAAATGCATTAGG +
Preference number: 2 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIEARYL*FQKCIR
Trigger: CCTAATGCATTTTTGAAACCAAAGGTACCTAGCCTC...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGGCCTTGGTGACCAGATaGACCAAGCTCTCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: LTSEEYSTLKARCVTKQEALVTR*TKLSLR
Trigger: TCTGAGGGAGAGCTTGGTCCATCTGGTCACCAAGGC...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTAACAGGGCCCAACCCTaGTGGCCTTTCCCACTCCTC +
Preference number: 2 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLNRAQP*WPFPLL
Trigger: GAGGAGTGGGAAAGGCCACCAGGGTTGGGCCCTGTT...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGGCCCGTGCCATTGCTTaGGCAAAGTTTCCCACTCCT +
Preference number: 2 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLARAIA*AKFPTP
Trigger: AGGAGTGGGAAACTTTGCCCAAGCAATGGCACGGGC...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGAACCAACAGAAAAGGTaGGCGTGTGCCGAGGCCAAG +
Preference number: 2 (lower is better)
Translates to: PQCPTELAEKMISARDGRNQQKR*ACAEAK
Trigger: CTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTT...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp CAGGTTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGATTTGGGGTGACTGGTaGGGACGTGTGTTGAGTGGC +
Preference number: 2 (lower is better)
Translates to: QVQTTLLAQFWAMVSYQQIWGDW*GRVLSG
Trigger: GCCACTCAACACACGTCCTCACCAGTCACCCCAAAT...CTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp CAACAGGGTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTGGGTGTGTATGGAATGAGTGTCTaGGAAACTGACTACTCTGCT +
Preference number: 2 (lower is better)
Translates to: QQGCGLLYVCEHAWALGVYGMSV*ETDYSA
Trigger: AGCAGAGTAGTCAGTTTCTCAGACACTCATTCCATA...CACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCACAACCCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTAAAGGGGCTGCCTCCTaGATCCTGCAATCCCCACGC +
Preference number: 2 (lower is better)
Translates to: RLITDRLILVSETILFVFKGAAS*ILQSPR
Trigger: GCGTGGGGATTGCAGGATTCAGGAGGCAGCCCCTTT...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAATGCGCACCTTCTCCCTaGCAAAAATACTGTCATTTT +
Preference number: 2 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQCAPSP*QKYCHF
Trigger: AAAATGACAGTATTTTTGGCAGGGAGAAGGTGCGCA...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATACGTCTTCAGAGTCAATaGAGCTCACATCTTAGATAT +
Preference number: 2 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIRLQSQ*SSHLRY
Trigger: ATATCTAAGATGTGAGCTGCATTGACTCTGAAGACG...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTAGTCCTTTCTATCAGTaGCCACTCCTGTTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSSPFYQ*PLLFLK
Trigger: TTTGAGGAACAGGAGTGGGCACTGATAGAAAGGACT...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp CCCACAGAACAGCAGCCTGAGAGAGGGCTAACAGCATTTTCTTCATACACAAAGTTGCATAGGCTGCCCTaGTCTCCTGGAGATAGACGT +
Preference number: 2 (lower is better)
Translates to: PTEQQPERGLTAFSSYTKLHRLP*SPGDRR
Trigger: ACGTCTATCTCCAGGAGAGCAGGGCAGCCTATGCAA...CTTTGTGTATGAAGAAAATGCTGTTAGCCCTCTCTCAGGCTGCTGTTCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp CCCACAGAACAGCAGCCTGAGAGAGGGCTAACAGCATTTTCTTCATACACAAAGTCAAATCGGAGGCTGTaGCCATGGCAGCTGATCCAT +
Preference number: 2 (lower is better)
Translates to: PTEQQPERGLTAFSSYTKSNRRL*PWQLIH
Trigger: ATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGA...CTTTGTGTATGAAGAAAATGCTGTTAGCCCTCTCTCAGGCTGCTGTTCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTACTGGTCCTCACAGCTTaGCAGACCCCCATATCGTAC +
Preference number: 2 (lower is better)
Translates to: MHWPRGGLNITACLRVLVLVLTA*QTPISY
Trigger: GTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCCTGGTCCTCACAGCTTaGCAGACCCCCATATCGTAC +
Preference number: 2 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPLVLTA*QTPISY
Trigger: GTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCTTGTGGGTGGCTTGGTaGCTACTGGTCCTCACAGCT +
Preference number: 2 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPLWVAW*LLVLTA
Trigger: AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAA...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAACCAGCTCTCCCACACTaGTGGCACCCGGGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKPALPH*WHPGLK
Trigger: CTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGG...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTCCTGTCTACGTGTTCTaGTATGGATTCAATCCTTTT +
Preference number: 2 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPPVYVF*YGFNPF
Trigger: AAAAGGATTGAATCCATACCAGAACACGTAGACAGG...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGGAGAAAGGCATCCTTTaGAAATGCATTGGCCCAGAG +
Preference number: 2 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWEKGIL*KCIGPE
Trigger: CTCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTC...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAGGTTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGCAGCTGATCCATTCCTaGGGATCAGCTTCACCCTCC +
Preference number: 2 (lower is better)
Translates to: QVQTTLLAQFWAMVSYQQQLIHS*GSASPS
Trigger: GGAGGGTGAAGCTGATCCCCAGGAATGGATCAGCTG...CTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR CAA 90 bp TATCTCACGCAACTTGGATGTGGACTAACCCTCTCCAAGACAATGTaGGAATCTGGATCGCTATCCCTTGGAAGCACTGCTTGGCAACAG +
Preference number: 2 (lower is better)
Translates to: YLTQLGCGLTLSKTM*ESGSLSLGSTAWQQ
Trigger: CTGTTGCCAAGCAGTGCTTCCAAGGGATAGCGATCCAGATTCCAACATTGTCTTGGAGAGGGTTAGTCCACATCCAAGTTGCGTGAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 90 bp GCCGTTCTCATAAACATGGTAGTTGCCACCATCCAGGTTGCTTCCTaGCCCATTCTTAAACCTCACAACAGAGCAGCAGAACACACAGCA +
Preference number: 2 (lower is better)
Translates to: AVLINMVVATIQVAS*PILKPHNRAAEHTA
Trigger: TGCTGTGTGTTCTGCTGCTCTGTTGTGAGGTTTAAGAATGGGCAAGGAAGCAACCTGGATGGTGGCAACTACCATGTTTATGAGAACGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR TCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGCACAGTCACTGGCGTTaGAGTCCTTTCTATCAGTGC +
Preference number: 2 (lower is better)
Translates to: LTSEEYSTLKARCVTKQEHSHWR*SPFYQC
Trigger: GCACTGATAGAAAGGACTTCAACGCCAGTGACTGTG...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGCGTCTTCAGAGTCAATaGAGCTCACATCTTAGATAT +
Preference number: 2 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMRLQSQ*SSHLRY
Trigger: ATATCTAAGATGTGAGCTGCATTGACTCTGAAGACG...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACGTCTTCAGAGTCAATaGAGCTCACATCTTAGATAT +
Preference number: 2 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQRLQSQ*SSHLRY
Trigger: ATATCTAAGATGTGAGCTGCATTGACTCTGAAGACG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp GTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGGAGACCCAGCTGCGTCTTCAGAGTCAATaGAGCTCACATCTTAGATAT +
Preference number: 2 (lower is better)
Translates to: VLASLLVCLGVVAWETQLRLQSQ*SSHLRY
Trigger: ATATCTAAGATGTGAGCTGCATTGACTCTGAAGACG...CAGCTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTAGTCCTTTCTATCAGTaGCCACTCCTGTTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: QGPLICIHPNERADLLSLSPFYQ*PLLFLK
Trigger: TTTGAGGAACAGGAGTGGGCACTGATAGAAAGGACT...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTCGCTGCCCGTGCCATTaGTTGGGCAAAGTTTCCCAC +
Preference number: 2 (lower is better)
Translates to: RLITDRLILVSETILFVFRCPCH*LGKVSH
Trigger: GTGGGAAACTTTGCCCAAGCAATGGCACGGGCAGCG...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGCTACGTGTTCTGGTATaGATTCAATCCTTTTTGCCT +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWLRVLV*IQSFLP
Trigger: AGGCAAAAAGGATTGAATCCATACCAGAACACGTAG...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTAGGGCAGGGGAGGAATaGGGAGCAAGAGGTAAACAC +
Preference number: 2 (lower is better)
Translates to: RLITDRLILVSETILFVFRAGEE*GARGKH
Trigger: GTGTTTACCTCTTGCTCCTCATTCCTCCCCTGCCCT...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTAATTGGCTGAGAAGATaGTATCTGCTAGAGATGGAA +
Preference number: 2 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFNWLRR*YLLEME
Trigger: TTCCATCTCTAGCAGATATCATCTTCTCAGCCAATT...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGCGGTGCAGTATGGAATaGGTGTCTGAGAAACTGACT +
Preference number: 2 (lower is better)
Translates to: LTSEEYSTLKARCVTKQERCSME*VSEKLT
Trigger: AGTCAGTTTCTCAGACACTCATTCCATACTGCACCG...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCGAAAAGGTGAGCGTGTaGCGAGGCCAAGGGCGGACA +
Preference number: 2 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILEKVSV*RGQGRT
Trigger: TGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTC...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGAAAAGGTGAGCGTGTaGCGAGGCCAAGGGCGGACA +
Preference number: 2 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKEKVSV*RGQGRT
Trigger: TGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTC...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGTGCGCACCTTCTCCCTaGCAAAAATACTGTCATTTT +
Preference number: 2 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWCAPSP*QKYCHF
Trigger: AAAATGACAGTATTTTTGGCAGGGAGAAGGTGCGCA...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGCACCAGCAAAGCTTTTaGATCACAGGGTTCCATCTC +
Preference number: 2 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLHQQSF*ITGFHL
Trigger: GAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTATGGAAGGGGAGCAGTaGCTTATGCCCCAAACACAC +
Preference number: 2 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLMEGEQ*LMPQTH
Trigger: GTGTGTTTGGGGCATAAGGCACTGCTCCCCTTCCAT...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTATCCCTTGGAAGCACTaGTTGGCAACAGGGTTGTGG +
Preference number: 2 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLIPWKH*LATGLW
Trigger: CCACAACCCTGTTGCCAAGCAGTGCTTCCAAGGGAT...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCTACGTGTTCTGGTATaGATTCAATCCTTTTTGCCT +
Preference number: 2 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSLRVLV*IQSFLP
Trigger: AGGCAAAAAGGATTGAATCCATACCAGAACACGTAG...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTCTACGTGTTCTGGTATaGATTCAATCCTTTTTGCCT +
Preference number: 2 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFLRVLV*IQSFLP
Trigger: AGGCAAAAAGGATTGAATCCATACCAGAACACGTAG...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGCCTCTATCTACATCCTaGGTTTCACCAGTGAGGAGG +
Preference number: 2 (lower is better)
Translates to: PQCPTELAEKMISARDGRPLSTS*VSPVRR
Trigger: CCTCCTCACTGGTGAAACCCAGGATGTAGATAGAGG...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAGGTTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGCCTCTATCTACATCCTaGGTTTCACCAGTGAGGAGG +
Preference number: 2 (lower is better)
Translates to: QVQTTLLAQFWAMVSYQQPLSTS*VSPVRR
Trigger: CCTCCTCACTGGTGAAACCCAGGATGTAGATAGAGG...CTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR CAA 90 bp TGGCGAGAAAGGCATCCTTTGGAAATGCATTGGCCCAGAGGTGGTTaGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTCAATCC +
Preference number: 2 (lower is better)
Translates to: WRERHPLEMHWPRGG*NITACLRVLVWIQS
Trigger: GGATTGAATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTCGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTGGCCCAGAGGTGGTTTaGATATTACAGCCTGTCTAC +
Preference number: 2 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLGPEVV*ILQPVY
Trigger: GTAGACAGGCTGTAATATTCAAACCACCTCTGGGCC...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR TCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTAATTGGCTGAGAAGATaGTATCTGCTAGAGATGGAA +
Preference number: 2 (lower is better)
Translates to: QGPLICIHPNERADLLSLNWLRR*YLLEME
Trigger: TTCCATCTCTAGCAGATATCATCTTCTCAGCCAATT...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTCAAATGGGCTGTTTGTaGTGCCCTAAGACTTGGCCC +
Preference number: 2 (lower is better)
Translates to: RLITDRLILVSETILFVFQMGCL*CPKTWP
Trigger: GGGCCAAGTCTTAGGGCATCACAAACAGCCCATTTG...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGCGTCTTCAGAGTCAATaGAGCTCACATCTTAGATAT +
Preference number: 2 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWRLQSQ*SSHLRY
Trigger: ATATCTAAGATGTGAGCTGCATTGACTCTGAAGACG...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGAGTCCTTTCTATCAGTaGCCACTCCTGTTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLSPFYQ*PLLFLK
Trigger: TTTGAGGAACAGGAGTGGGCACTGATAGAAAGGACT...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp CAGGTTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGCACCAGCAAAGCTTTTaGATCACAGGGTTCCATCTC +
Preference number: 2 (lower is better)
Translates to: QVQTTLLAQFWAMVSYQQHQQSF*ITGFHL
Trigger: GAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG...CTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGACATGTGGCAAATGTTaGTTTAATAAAGTCACGGAA +
Preference number: 2 (lower is better)
Translates to: LADPHIVPLLLKVVVASWTCGKC*FNKVTE
Trigger: TTCCGTGACTTTATTAAAGCAACATTTGCCACATGT...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR GCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTACATGTGGCAAATGTTaGTTTAATAAAGTCACGGAA +
Preference number: 2 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTTCGKC*FNKVTE
Trigger: TTCCGTGACTTTATTAAAGCAACATTTGCCACATGT...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTCCTGTCTACGTGTTCTaGTATGGATTCAATCCTTTT +
Preference number: 2 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTPVYVF*YGFNPF
Trigger: AAAAGGATTGAATCCATACCAGAACACGTAGACAGG...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTCACGCAACTTGGATGTaGACTAACCCTCTCCAAGAC +
Preference number: 2 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLHATWM*TNPLQD
Trigger: GTCTTGGAGAGGGTTAGTCCACATCCAAGTTGCGTG...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGTTATCTCACGCAACTTaGATGTGGACTAACCCTCTC +
Preference number: 2 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLLSHAT*MWTNPL
Trigger: GAGAGGGTTAGTCCACATCCAAGTTGCGTGAGATAA...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTTTTGGTGGACGCTTGTaGCTCTCCTGGATGGTTCTC +
Preference number: 2 (lower is better)
Translates to: RLITDRLILVSETILFVFFGGRL*LSWMVL
Trigger: GAGAACCATCCAGGAGAGCCACAAGCGTCCACCAAA...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 90 bp TTGGCCCAAATGACCATTACACACTCTCAGGTTCAAACAACCTTATaGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGTGTGT +
Preference number: 2 (lower is better)
Translates to: LAQMTITHSQVQTTL*AQFWAMVSYQQRVC
Trigger: ACACACTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAACCTGAGAGTGTGTAATGGTCATTTGGGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR TCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTCAAGGCAGGAAAAGATaGGTCCCATTCACCATCACC +
Preference number: 2 (lower is better)
Translates to: RLITDRLILVSETILFVFQGRKR*VPFTIT
Trigger: GGTGATGGTGAATGGGACTCATCTTTTCCTGCCTTG...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTGATGCTCTCTCTAGGTaGTGCCAACAGGAATTACCT +
Preference number: 2 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLDALSR*CQQELP
Trigger: AGGTAATTCCTGTTGGCAGCACCTAGAGAGAGCATC...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCTTGTGGGTGGCTTGGTaGCTACTGGTCCTCACAGCT +
Preference number: 2 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILLWVAW*LLVLTA
Trigger: AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAA...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAATTGTGGGTGGCTTGGTaGCTACTGGTCCTCACAGCT +
Preference number: 2 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKLWVAW*LLVLTA
Trigger: AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAA...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCTTATTGGCTCAGTTCTaGGCTATGGTTTCTTACCAG +
Preference number: 2 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSLLAQF*AMVSYQ
Trigger: CTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAA...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTCACGCAACTTGGATGTaGACTAACCCTCTCCAAGAC +
Preference number: 2 (lower is better)
Translates to: RLITDRLILVSETILFVFHATWM*TNPLQD
Trigger: GTCTTGGAGAGGGTTAGTCCACATCCAAGTTGCGTG...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTAGAAAACAGAGACATTaGGTCTGGAGGGGAAGATGC +
Preference number: 2 (lower is better)
Translates to: RLITDRLILVSETILFVFRKQRH*VWRGRC
Trigger: GCATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCT...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGATCCAAAGCGTTTTCTaGAAAGGCCAGTCCTTTAAT +
Preference number: 2 (lower is better)
Translates to: LTSEEYSTLKARCVTKQEIQSVF*KGQSFN
Trigger: ATTAAAGGACTGGCCTTTCCAGAAAACGCTTTGGAT...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTTATGAATGCGCTATGTaGGCTCAGTTGCACCTTGCA +
Preference number: 2 (lower is better)
Translates to: RLITDRLILVSETILFVFYECAM*AQLHLA
Trigger: TGCAAGGTGCAACTGAGCCCACATAGCGCATTCATA...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTAGTCCTTTCTATCAGTaGCCACTCCTGTTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: RLITDRLILVSETILFVFSPFYQ*PLLFLK
Trigger: TTTGAGGAACAGGAGTGGGCACTGATAGAAAGGACT...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR GCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTGCTCTCTCTAGGTGCTaGCAACAGGAATTACCTAAA +
Preference number: 2 (lower is better)
Translates to: RLITDRLILVSETILFVFALSRC*QQELPK
Trigger: TTTAGGTAATTCCTGTTGGCAGCACCTAGAGAGAGC...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CCA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAAGAAAACAGAGACATTaGGTCTGGAGGGGAAGATGC +
Preference number: 2 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKRKQRH*VWRGRC
Trigger: GCATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCT...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CCA 72 bp AGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTaGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: RPRADSVVERSG*LRDRARGQAPS
Trigger: GGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR CCA 72 bp GTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTaGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGG +
Preference number: 3 (lower is better)
Translates to: VSVCRGQGRTVW*NARGGCETGQG
Trigger: CCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGCTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCACTCCCCTCCTCCCACTaGCAAAGTGGTGGCTGTGCC +
Preference number: 3 (lower is better)
Translates to: WWNARGGCETGQGARLPPLPSSH*QSGGCA
Trigger: GGCACAGCCACCACTTTGCAAGTGGGAGGAGGGGAG...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGGGCTTGTGGGTGGCTaGGTGGCTACTGGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: PRPRADSVVERSGWLRDRGLVGG*VATGPH
Trigger: GTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR GCA 72 bp ACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACTaGCCCGGGCCACTGCTTCTCTGGCTGCTGGGGAGG +
Preference number: 3 (lower is better)
Translates to: TRPLDCRHCPRN*PGPLLLWLLGR
Trigger: CCTCCCCAGCAGCCAGAGAAGCAGTGGCCCGGGGCAGTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
3UTR-3UTR CAA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGGCTTGTGGGTGGCTaGGTGGCTACTGGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: PRADSVVERSGWLRDRARGLVGG*VATGPH
Trigger: GTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR GCA 72 bp GAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTaGCCTCTACTCTGGACAGGGTGGGTGTGGCCCTCT +
Preference number: 3 (lower is better)
Translates to: EGGSMGPGHVDR*PLLWTGWVWPS
Trigger: AGAGGGCCACACCCACCCTGTCCAGAGTAGAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR GCA 72 bp TCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTaGCCTCGGAACTGCCCCGGGCCACTGCTTCTCTGG +
Preference number: 3 (lower is better)
Translates to: SPRLTRPLDCRH*PRNCPGPLLLW
Trigger: CCAGAGAAGCAGTGGCCCGGGGCAGTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
3UTR CCA 72 bp AAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTaGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAA +
Preference number: 3 (lower is better)
Translates to: KVSVCRGQGRTV*WNARGGCETGQ
Trigger: TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR CCA 72 bp GCAGGAGGTCCTCCGGGGTCCAGCATGGGTCGGGAGTaGGAGCAGGACAGAAGGTGGCCACGTCACAGGCGA +
Preference number: 3 (lower is better)
Translates to: AGGPPGSSMGRE*EQDRRWPRHRR
Trigger: TCGCCTGTGACGTGGCCACCTTCTGTCCTGCTCCCACTCCCGACCCATGCTGGACCCCGGAGGACCTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp AGGGGTCGTGCTTCACCCGACACTCCAGCTGCACCGTaGTGCCCCTTCTGGCCACCTGGTCCTCGGGCATCC +
Preference number: 3 (lower is better)
Translates to: RGRASPDTPAAP*CPFWPPGPRAS
Trigger: GGATGCCCGAGGACCAGGTGGCCAGAAGGGGCACCACGGTGCAGCTGGAGTGTCGGGTGAAGCACGACCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CAA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCGGGCTTGTGGGTGGCTaGGTGGCTACTGGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: SISSRVAAWALATWTGALGLVGG*VATGPH
Trigger: GTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGTCATTGGGAGGGGGCTaGTGGGTGGCTTGGTGGCTA +
Preference number: 3 (lower is better)
Translates to: QLSSATAPALPHWWHPGLSLGGG*WVAWWL
Trigger: TAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGA...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAATCATTGGGAGGGGGCTaGTGGGTGGCTTGGTGGCTA +
Preference number: 3 (lower is better)
Translates to: GQGRTVWWNARGGCETGQSLGGG*WVAWWL
Trigger: TAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGA...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCAGACCTGCTCAGTCTaGGGGCAAGTCCCCATCCAC +
Preference number: 3 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAQTCSV*GQVPIH
Trigger: GTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGTCCTGCCGGAACACTaGCATAGGCTGCCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAVLPEH*HRLPCS
Trigger: AGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGAC...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCCCCACACTGTGACGTaGTTCCAGGCCTCTCGAGTC +
Preference number: 3 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAPHTVT*FQASRV
Trigger: GACTCGAGAGGCCTGGAACAACGTCACAGTGTGGGG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR TCA 72 bp AGGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTaGCTGCAGGCACTGCCCTCGGAACTGCCCCGGGCC +
Preference number: 3 (lower is better)
Translates to: RQEEITTPDPAT*LQALPSELPRA
Trigger: GGCCCGGGGCAGTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
3UTR GCA 72 bp TTCAGGGAGGGGTCGTGCTTCACCCGACACTCCAGCTaGACCGTGGTGCCCCTTCTGGCCACCTGGTCCTCG +
Preference number: 3 (lower is better)
Translates to: FREGSCFTRHSS*TVVPLLATWSS
Trigger: CGAGGACCAGGTGGCCAGAAGGGGCACCACGGTGCAGCTGGAGTGTCGGGTGAAGCACGACCCCTCCCTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR CCA 72 bp TCACCCGACACTCCAGCTGCACCGTGGTGCCCCTTCTaGCCACCTGGTCCTCGGGCATCCGGTAGATCCTGG +
Preference number: 3 (lower is better)
Translates to: SPDTPAAPWCPF*PPGPRASGRSW
Trigger: CCAGGATCTACCGGATGCCCGAGGACCAGGTGGCCAGAAGGGGCACCACGGTGCAGCTGGAGTGTCGGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CAA 90 bp AGCCGCACGCTCCTCTCGGCCAGGTCGGTCAGCTCCAGGTCCCGGGGCCGGTCTCCCCATATCGTACCCTaGTTACTGAAGGTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: SRTLLSARSVSSRSRGRSPHIVP*LLKVVV
Trigger: CACCACCACCTTCAGTAACAAGGGTACGATATGGGG...AGACCGGCCCCGGGACCTGGAGCTGACCGACCTGGCCGAGAGGAGCGTGCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CAA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTA +
Preference number: 3 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAATGPHS*ADPHIV
Trigger: TACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGT...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTA +
Preference number: 3 (lower is better)
Translates to: ADSVVERSGWLRDRARGQTGPHS*ADPHIV
Trigger: TACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGT...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATCGGTCTGGCCGTCCTTaGGGCAGGGCAGCCAAACGG +
Preference number: 3 (lower is better)
Translates to: GLVGGLVATGPHSLADPHRSGRP*GRAAKR
Trigger: CCGTTTGGCTGCCCTGCCCAAAGGACGGCCAGACCG...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CAA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCCGCCGCGACTCCTCTaGATGAAACAGACGATGAGC +
Preference number: 3 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAPPRLL*MKQTMS
Trigger: GCTCATCGTCTGTTTCATCAAGAGGAGTCGCGGCGG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR TCA 72 bp GGGTCTGCCCCACCACGTAGCGAGAGCCCCACACTGTaGCGTTGTTCCAGGCCTCTCGAGTCTCTCTCCGCC +
Preference number: 3 (lower is better)
Translates to: GSAPPRSESPTL*RCSRPLESLSA
Trigger: GGCGGAGAGAGACTCGAGAGGCCTGGAACAACGTCACAGTGTGGGGCTCTCGCTACGTGGTGGGGCAGACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR GCA 72 bp TGGGGAGCGGTGCCTTGTGCCGGCCTCCCAGGAACCTaGTGGCCACTGAGAAGGGATTCTCTGGCACTAGCC +
Preference number: 3 (lower is better)
Translates to: WGAVPCAGLPGT*WPLRRDSLALA
Trigger: GGCTAGTGCCAGAGAATCCCTTCTCAGTGGCCAGCAGGTTCCTGGGAGGCCGGCACAAGGCACCGCTCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 72 bp GTCACTCTGCACCAAGGTGTCATGAGTGGGGAGCGGTaGCTTGTGCCGGCCTCCCAGGAACCTGCTGGCCAC +
Preference number: 3 (lower is better)
Translates to: VTLHQGVMSGER*LVPASQEPAGH
Trigger: GTGGCCAGCAGGTTCCTGGGAGGCCGGCACAAGGCACCGCTCCCCACTCATGACACCTTGGTGCAGAGTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTaGCCACGTGGACAGGTGCCCTCTACTCTGGACAGG +
Preference number: 3 (lower is better)
Translates to: RVPSPRGWQHGP*PRGQVPSTLDR
Trigger: CCTGTCCAGAGTAGAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CCA 72 bp TGGGCAGGAGGTCACTCTGCACCAAGGTGTCATGAGTaGGGAGCGGTGCCTTGTGCCGGCCTCCCAGGAACC +
Preference number: 3 (lower is better)
Translates to: WAGGHSAPRCHE*GAVPCAGLPGT
Trigger: GGTTCCTGGGAGGCCGGCACAAGGCACCGCTCCCCACTCATGACACCTTGGTGCAGAGTGACCTCCTGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGCCCCATATCGTACCCTaGTTACTGAAGGTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPPHIVP*LLKVVV
Trigger: CACCACCACCTTCAGTAACAAGGGTACGATATGGGG...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTA +
Preference number: 3 (lower is better)
Translates to: DSVVERSGWLRDRARGQATGPHS*ADPHIV
Trigger: TACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGT...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTA +
Preference number: 3 (lower is better)
Translates to: QLSSATAPALPHWWHPGLTGPHS*ADPHIV
Trigger: TACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGT...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTA +
Preference number: 3 (lower is better)
Translates to: PRADSVVERSGWLRDRARTGPHS*ADPHIV
Trigger: TACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGT...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGGCTTGTGGGTGGCTaGGTGGCTACTGGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: SQGSISSRVAAWALATWTGLVGG*VATGPH
Trigger: GTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCATCACCTCTCCCATaGACCACAACCATCTCCAGC +
Preference number: 3 (lower is better)
Translates to: DSVVERSGWLRDRARGQAPSPLP*TTTISS
Trigger: GCTGGAGATGGTTGTGGTCAATGGGAGAGGTGATGG...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR TCA 72 bp ACCATCACCCAGGCAAGGTGGGAGGCAGCTGTCCCCTaGCCGATGGCAGTGTACTTCCCGAACCCTGGCCTC +
Preference number: 3 (lower is better)
Translates to: TITQARWEAAVP*PMAVYFPNPGL
Trigger: GAGGCCAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTCCCACCTTGCCTGGGTGATGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 72 bp TGTAAGCTTCATTCGGGGGTGCTGGTGACTCCTCTGTaGCGGCTTCCCCAGAGCCCACCTGCGTCCTGGCGC +
Preference number: 3 (lower is better)
Translates to: CKLHSGVLVTPL*RLPQSPPASWR
Trigger: GCGCCAGGACGCAGGTGGGCTCTGGGGAAGCCGTCACAGAGGAGTCACCAGCACCCCCGAATGAAGCTTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR GCA 72 bp TTCAGCCAGGAGACGGTGAGTTTCAGGGAGGGGTCGTaGTTCACCCGACACTCCAGCTGCACCGTGGTGCCC +
Preference number: 3 (lower is better)
Translates to: FSQETVSFREGS*FTRHSSCTVVP
Trigger: GGGCACCACGGTGCAGCTGGAGTGTCGGGTGAAGCACGACCCCTCCCTGAAACTCACCGTCTCCTGGCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR CCA 72 bp CCCAGGCAAGGTGGGAGGCAGCTGTCCCCTGACCGATaGCAGTGTACTTCCCGAACCCTGGCCTCGACAATC +
Preference number: 3 (lower is better)
Translates to: PRQGGRQLSPDR*QCTSRTLASTI
Trigger: GATTGTCGAGGCCAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTCCCACCTTGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp GGTAGGCCTTGGCCAGGTCTTGGTCTAGCTCGGTGCTaGCGACACACGTGTAACTGCCCTGGTCCCGCTCTG +
Preference number: 3 (lower is better)
Translates to: GRPWPGLGLARC*RHTCNCPGPAL
Trigger: CAGAGCGGGACCAGGGCAGTTACACGTGTGTCGCCAGCACCGAGCTAGACCAAGACCTGGCCAAGGCCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CAA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAACCCCATATCGTACCCTaGTTACTGAAGGTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: GQGRTVWWNARGGCETGQPHIVP*LLKVVV
Trigger: CACCACCACCTTCAGTAACAAGGGTACGATATGGGG...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACAGACCTGCTCAGTCTaGGGGCAAGTCCCCATCCAC +
Preference number: 3 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRQTCSV*GQVPIH
Trigger: GTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTG...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATCAGACCTGCTCAGTCTaGGGGCAAGTCCCCATCCAC +
Preference number: 3 (lower is better)
Translates to: GLVGGLVATGPHSLADPHQTCSV*GQVPIH
Trigger: GTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTG...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATTCTCGTACTGGGTACTaGCCGCCGCGACTCCTCTTG +
Preference number: 3 (lower is better)
Translates to: GLVGGLVATGPHSLADPHSRTGY*PPRLLL
Trigger: CAAGAGGAGTCGCGGCGGCAAGTACCCAGTACGAGA...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR TCA 72 bp GGAATGCTAGGAGATGGTCAAGGGAGGGCACTGGTCTaGCTCTGCCCGGCTTGCCTATGCCTCCCAGGGCCT +
Preference number: 3 (lower is better)
Translates to: GMLGDGQGRALV*LCPACLCLPGP
Trigger: AGGCCCTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCATCTCCTAGCATTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 72 bp CTGGCTGGCAGCCGGAGAGGCTCAAATCGGAGGCTGTaGCCATGGCAGCTGATCCATTCCTGGGGATCAGCT +
Preference number: 3 (lower is better)
Translates to: LAGSRRGSNRRL*PWQLIHSWGSA
Trigger: AGCTGATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTCCGGCTGCCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CCA 72 bp GGCAGCCGGAGAGGCTCAAATCGGAGGCTGTGCCCATaGCAGCTGATCCATTCCTGGGGATCAGCTTCACCC +
Preference number: 3 (lower is better)
Translates to: GSRRGSNRRLCP*QLIHSWGSASP
Trigger: GGGTGAAGCTGATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTCCGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CCA 72 bp TGTCCCCTGACCGATGGCAGTGTACTTCCCGAACCCTaGCCTCGACAATCCTTCAGGGGAGCCCGTGCCTCT +
Preference number: 3 (lower is better)
Translates to: CPLTDGSVLPEP*PRQSFRGARAS
Trigger: AGAGGCACGGGCTCCCCTGAAGGATTGTCGAGGCCAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp GGGACACCACGCCACGGAGGCGGTCACCAGGGAAGCTaGCTTGCTGTCTCTTCTGAGACACCCACAGGTTCT +
Preference number: 3 (lower is better)
Translates to: GTPRHGGGHQGS*LAVSSETPTGS
Trigger: AGAACCTGTGGGTGTCTCAGAAGAGACAGCAAGCCAGCTTCCCTGGTGACCGCCTCCGTGGCGTGGTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CAA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCGGGCTTGTGGGTGGCTaGGTGGCTACTGGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTGLVGG*VATGPH
Trigger: GTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACGGGCTTGTGGGTGGCTaGGTGGCTACTGGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHGLVGG*VATGPH
Trigger: GTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGCGCAACCATGGGCTTTaGTGTGTTTGGCTGGGGCTG +
Preference number: 3 (lower is better)
Translates to: MVKGGHWSDSARLAYASQRNHGL*CVWLGL
Trigger: CAGCCCCAGCCAAACACACAAAAGCCCATGGTTGCG...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp TGTGACGGCTTCCCCAGAGCCCACCTGCGTCCTGGCGCTGAGGGTAAAGCGGTACTGCTCCCAACCTCGTaGATGGCAATGACACGGAAC +
Preference number: 3 (lower is better)
Translates to: CDGFPRAHLRPGAEGKAVLLPTS*MAMTRN
Trigger: GTTCCGTGTCATTGCCATCAACGAGGTTGGGAGCAG...TACCGCTTTACCCTCAGCGCCAGGACGCAGGTGGGCTCTGGGGAAGCCGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR TCA 72 bp TGTTCCAGGCCTCTCGAGTCTCTCTCCGCCTCCACTTaGCAATGTAGCGCAGGTTGGGGCCAAAGGCCGAGG +
Preference number: 3 (lower is better)
Translates to: CSRPLESLSAST*QCSAGWGQRPR
Trigger: CCTCGGCCTTTGGCCCCAACCTGCGCTACATTGTCAAGTGGAGGCGGAGAGAGACTCGAGAGGCCTGGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR TCA 72 bp CACCTGCGTCCTGGCGCTGAGGGTAAAGCGGTAGCGTaGCACGGGGTCCGTTCTTTGCACCGTGAACTTGGT +
Preference number: 3 (lower is better)
Translates to: HLRPGAEGKAVA*HGVRSLHRELG
Trigger: ACCAAGTTCACGGTGCAAAGAACGGACCCCGTGTCACGCTACCGCTTTACCCTCAGCGCCAGGACGCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR GCA 72 bp GGCCACTTCTGGTCCTGCCGGAACACTTGCATAGGCTaGCCTGCTCTCCTGGAGATAGACGTTGCTGGAGGC +
Preference number: 3 (lower is better)
Translates to: GHFWSCRNTCIG*PALLEIDVAGG
Trigger: GCCTCCAGCAACGTCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTGGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR GCA 72 bp CCAGGTGGTGTGGCAGACTTGCTCATCGTCCCTTCCTaGCCTAAGGGCCTGCTTTCGGTGCAATGGGTACGC +
Preference number: 3 (lower is better)
Translates to: PGGVADLLIVPS*PKGLLSVQWVR
Trigger: GCGTACCCATTGCACCGAAAGCAGGCCCTTAGGGCAGGAAGGGACGATGAGCAAGTCTGCCACACCACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 72 bp GCAGCCCTTCCCAGTCACCAGGTGGTGTGGCAGACTTaGTCATCGTCCCTTCCTGCCCTAAGGGCCTGCTTT +
Preference number: 3 (lower is better)
Translates to: AALPSHQVVWQT*SSSLPALRACF
Trigger: AAAGCAGGCCCTTAGGGCAGGAAGGGACGATGAGCAAGTCTGCCACACCACCTGGTGACTGGGAAGGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 72 bp CCTGGCAGGACACTGGAACGAGGTGCAGAGGCAGGCTaGGGGCTTACTTCTCCCCAAGACCCTTACGAGAGA +
Preference number: 3 (lower is better)
Translates to: PGRTLERGAEAG*GLTSPQDPYER
Trigger: TCTCTCGTAAGGGTCTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 72 bp GGACAGTACAGAGCCTGGCAGGACACTGGAACGAGGTaGAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAGA +
Preference number: 3 (lower is better)
Translates to: GQYRAWQDTGTR*RGRLRAYFSPR
Trigger: TCTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGCCAGGCTCTGTACTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 72 bp CTTGGTCTAGCTCGGTGCTGGCGACACACGTGTAACTaGCCTGGTCCCGCTCTGCCACCCCAAAGATGGTCA +
Preference number: 3 (lower is better)
Translates to: LGLARCWRHTCN*PGPALPPQRWS
Trigger: TGACCATCTTTGGGGTGGCAGAGCGGGACCAGGGCAGTTACACGTGTGTCGCCAGCACCGAGCTAGACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR CCA 72 bp CATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTaGTCCTCACAGCTTGGCAGACCCCCATATCGTACC +
Preference number: 3 (lower is better)
Translates to: HWEGACGWLGGY*SSQLGRPPYRT
Trigger: GGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR CCA 72 bp GGCCACGTGGACAGGTGCCCTCTACTCTGGACAGGGTaGGTGTGGCCCTCTATCTACATCCTGGGTTTCACC +
Preference number: 3 (lower is better)
Translates to: GHVDRCPLLWTG*VWPSIYILGFT
Trigger: GGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAGTAGAGGGCACCTGTCCACGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CCA 72 bp CCCTTACGAGAGAAGCAGCCCTTCCCAGTCACCAGGTaGTGTGGCAGACTTGCTCATCGTCCCTTCCTGCCC +
Preference number: 3 (lower is better)
Translates to: PLREKQPFPVTR*CGRLAHRPFLP
Trigger: GGGCAGGAAGGGACGATGAGCAAGTCTGCCACACCACCTGGTGACTGGGAAGGGCTGCTTCTCTCGTAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp GGGCACTGGGTGTGGCAGGGGAGCTTGTCCGTTAGCTaGGAAACCCACACATCCTCGGGTTTCCACCGTCTT +
Preference number: 3 (lower is better)
Translates to: GHWVWQGSLSVS*ETHTSSGFHRL
Trigger: AAGACGGTGGAAACCCGAGGATGTGTGGGTTTCCCAGCTAACGGACAAGCTCCCCTGCCACACCCAGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTCTCCCCTCCTCCCACTaGCAAAGTGGTGGCTGTGCC +
Preference number: 3 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPLPSSH*QSGGCA
Trigger: GGCACAGCCACCACTTTGCAAGTGGGAGGAGGGGAG...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTA +
Preference number: 3 (lower is better)
Translates to: GLVGGLVATGPHSLADPHTGPHS*ADPHIV
Trigger: TACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGT...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTA +
Preference number: 3 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRTGPHS*ADPHIV
Trigger: TACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGT...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGGGCTTGTGGGTGGCTaGGTGGCTACTGGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIGLVGG*VATGPH
Trigger: GTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGGCTTGTGGGTGGCTaGGTGGCTACTGGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPGLVGG*VATGPH
Trigger: GTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCGAGAAAGGCATCCTTaGGAAATGCATTGGCCCAGA +
Preference number: 3 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVRERHP*EMHWPR
Trigger: TCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTCG...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCGTCCTGCCGGAACACTaGCATAGGCTGCCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIVLPEH*HRLPCS
Trigger: AGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGAC...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTGTTCAAACAACCTTATaGGCTCAGTTCTGGGCTATG +
Preference number: 3 (lower is better)
Translates to: DSVVERSGWLRDRARGQAVQTTL*AQFWAM
Trigger: CATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAAC...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR TCA 72 bp GCGCAGCCCTGGGATAATCTTCTCCGGAGTAACCGATaGCGGACTCTGGCTCAGGGCCCTTCCCGAAGTCAT +
Preference number: 3 (lower is better)
Translates to: AQPWDNLLRSNR*RTLAQGPSRSH
Trigger: ATGACTTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATCGGTTACTCCGGAGAAGATTATCCCAGGGCTGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR GCA 72 bp CTCCCAGCCAGACAGACTGGAGCGCCGATGGCATGGTaGTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGT +
Preference number: 3 (lower is better)
Translates to: LPARQTGAPMAW*CPGFTVGMSWG
Trigger: ACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCATCGGCGCTCCAGTCTGTCTGGCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 72 bp CACAGGGCGCCAGAAAGAGCCCGCTGCCCGTGCCATTaGTTGGGCAAAGTTTCCCACTCCTTCAGCTCAGAT +
Preference number: 3 (lower is better)
Translates to: HRAPERARCPCH*LGKVSHSFSSD
Trigger: ATCTGAGCTGAAGGAGTGGGAAACTTTGCCCAAGCAATGGCACGGGCAGCGGGCTCTTTCTGGCGCCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp ACGAGAGAAGCAGCCCTTCCCAGTCACCAGGTGGTGTaGCAGACTTGCTCATCGTCCCTTCCTGCCCTAAGG +
Preference number: 3 (lower is better)
Translates to: TREAALPSHQVV*QTCSSSLPALR
Trigger: CCTTAGGGCAGGAAGGGACGATGAGCAAGTCTGCCACACCACCTGGTGACTGGGAAGGGCTGCTTCTCTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp GGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTaGTTCTTGACTGCTCTGTCCCGCCCAGCCTTGGTG +
Preference number: 3 (lower is better)
Translates to: GSGSRTVSQATP*FLTALSRPALV
Trigger: CACCAAGGCTGGGCGGGACAGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTCTCCCCTCCTCCCACTaGCAAAGTGGTGGCTGTGCC +
Preference number: 3 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTLPSSH*QSGGCA
Trigger: GGCACAGCCACCACTTTGCAAGTGGGAGGAGGGGAG...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCATATCGTACCCTaGTTACTGAAGGTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRPHIVP*LLKVVV
Trigger: CACCACCACCTTCAGTAACAAGGGTACGATATGGGG...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCCCCCATATCGTACCCTaGTTACTGAAGGTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: LNSSPANPRVAACMGPAAPHIVP*LLKVVV
Trigger: CACCACCACCTTCAGTAACAAGGGTACGATATGGGG...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATCCCCATATCGTACCCTaGTTACTGAAGGTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: GLVGGLVATGPHSLADPHPHIVP*LLKVVV
Trigger: CACCACCACCTTCAGTAACAAGGGTACGATATGGGG...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGATCATTGGGAGGGGGCTaGTGGGTGGCTTGGTGGCTA +
Preference number: 3 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRSLGGG*WVAWWL
Trigger: TAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGA...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATATCATTGGGAGGGGGCTaGTGGGTGGCTTGGTGGCTA +
Preference number: 3 (lower is better)
Translates to: HFWSCRNTCIGCPALLEISLGGG*WVAWWL
Trigger: TAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGA...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATACAGACCTGCTCAGTCTaGGGGCAAGTCCCCATCCAC +
Preference number: 3 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIQTCSV*GQVPIH
Trigger: GTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTG...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGACAGACCTGCTCAGTCTaGGGGCAAGTCCCCATCCAC +
Preference number: 3 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRQTCSV*GQVPIH
Trigger: GTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTG...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAACTTGGTTTTCAGCTTaGCCCAGGATGTTGGTGGCG +
Preference number: 3 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRTWFSA*PRMLVA
Trigger: CGCCACCAACATCCTGGGCAAAGCTGAAAACCAAGT...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CAA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGCTCCCCTCCTCCCACTaGCAAAGTGGTGGCTGTGCC +
Preference number: 3 (lower is better)
Translates to: TKSIESSLGGGITTLSTVLPSSH*QSGGCA
Trigger: GGCACAGCCACCACTTTGCAAGTGGGAGGAGGGGAG...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTGGGCTTGTGGGTGGCTaGGTGGCTACTGGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSGLVGG*VATGPH
Trigger: GTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp TCGGACTTTAACTTCAGTGGGCGCAGCCCTGGGATAATCTTCTCCGGAGTAACCGGGCTTGTGGGTGGCTaGGTGGCTACTGGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: SDFNFSGRSPGIIFSGVTGLVGG*VATGPH
Trigger: GTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC...GGTTACTCCGGAGAAGATTATCCCAGGGCTGCGCCCACTGAAGTTAAAGTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CAA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAATCATTGGGAGGGGGCTaGTGGGTGGCTTGGTGGCTA +
Preference number: 3 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQSLGGG*WVAWWL
Trigger: TAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGA...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATCGAGAAAGGCATCCTTaGGAAATGCATTGGCCCAGA +
Preference number: 3 (lower is better)
Translates to: GLVGGLVATGPHSLADPHRERHP*EMHWPR
Trigger: TCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTCG...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAACACAGTCACTGGCGTaGAAGTCCTTTCTATCAGTG +
Preference number: 3 (lower is better)
Translates to: SQGSISSRVAAWALATWTTQSLA*KSFLSV
Trigger: CACTGATAGAAAGGACTTCAACGCCAGTGACTGTGT...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGGTCCTGCCGGAACACTaGCATAGGCTGCCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: LADPHIVPLLLKVVVASWVLPEH*HRLPCS
Trigger: AGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGAC...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR TCA 72 bp TGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTaGGGACGTGTGTTGAGTGGCCACTTCTGGTCCTGC +
Preference number: 3 (lower is better)
Translates to: CRSASVSIWGDW*GRVLSGHFWSC
Trigger: GCAGGACCAGAAGTGGCCACTCAACACACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR TCA 72 bp GGAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTaGTCCATTCCTGGGGATCAGCTTCACCCTCCTGAA +
Preference number: 3 (lower is better)
Translates to: GEAQIGGCAHGS*SIPGDQLHPPE
Trigger: TTCAGGAGGGTGAAGCTGATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR TCA 72 bp TATAGAGCGGCTCGTCATCCTTCAGCCAGGAGACGGTaGGTTTCAGGGAGGGGTCGTGCTTCACCCGACACT +
Preference number: 3 (lower is better)
Translates to: YRAARHPSARRR*VSGRGRASPDT
Trigger: AGTGTCGGGTGAAGCACGACCCCTCCCTGAAACTCACCGTCTCCTGGCTGAAGGATGACGAGCCGCTCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR TCA 72 bp CTGGTAGTTGACATACGGGGACAGCCGGAGGACGGCTaGGTTAACGCTGCCGGGGTACTTGGAATGGTCATG +
Preference number: 3 (lower is better)
Translates to: LVVDIRGQPEDG*VNAAGVLGMVM
Trigger: CATGACCATTCCAAGTACCCCGGCAGCGTTAACTCAGCCGTCCTCCGGCTGTCCCCGTATGTCAACTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR TCA 72 bp AGGCGGTCACCAGGGAAGCTGGCTTGCTGTCTCTTCTaGGACACCCACAGGTTCTTCAGCAAGCTGCTCTCC +
Preference number: 3 (lower is better)
Translates to: RRSPGKLACCLF*DTHRFFSKLLS
Trigger: GGAGAGCAGCTTGCTGAAGAACCTGTGGGTGTCTCAGAAGAGACAGCAAGCCAGCTTCCCTGGTGACCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR GCA 72 bp TCATCGTCCCTTCCTGCCCTAAGGGCCTGCTTTCGGTaGAATGGGTACGCTGGCATGTACGGTGCAGTATGG +
Preference number: 3 (lower is better)
Translates to: SSSLPALRACFR*NGYAGMYGAVW
Trigger: CCATACTGCACCGTACATGCCAGCGTACCCATTGCACCGAAAGCAGGCCCTTAGGGCAGGAAGGGACGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 72 bp CAGACTTGCTCATCGTCCCTTCCTGCCCTAAGGGCCTaGTTTCGGTGCAATGGGTACGCTGGCATGTACGGT +
Preference number: 3 (lower is better)
Translates to: QTCSSSLPALRA*FRCNGYAGMYG
Trigger: ACCGTACATGCCAGCGTACCCATTGCACCGAAAGCAGGCCCTTAGGGCAGGAAGGGACGATGAGCAAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 72 bp CAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTaGTCTGTCCCGCCCAGCCTTGGTGACCAGATGGAC +
Preference number: 3 (lower is better)
Translates to: QDCFSSHTVVLD*SVPPSLGDQMD
Trigger: GTCCATCTGGTCACCAAGGCTGGGCGGGACAGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 72 bp AAGGGAAAGAAAGGACACTTCCCTGGGCTTGGGCTGTaGAGGCTGGGGACAGCCACAAAGTCTGGCTTGGAC +
Preference number: 3 (lower is better)
Translates to: KGKKGHFPGLGL*RLGTATKSGLD
Trigger: GTCCAAGCCAGACTTTGTGGCTGTCCCCAGCCTGCACAGCCCAAGCCCAGGGAAGTGTCCTTTCTTTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp TTCCTCCCAGCCAGACAGACTGGAGCGCCGATGGCATaGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGG +
Preference number: 3 (lower is better)
Translates to: FLPARQTGAPMA*CCPGFTVGMSW
Trigger: CCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCATCGGCGCTCCAGTCTGTCTGGCTGGGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp GCACTTTCCTCCCAGCCAGACAGACTGGAGCGCCGATaGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGT +
Preference number: 3 (lower is better)
Translates to: ALSSQPDRLERR*HGAVLASLLVC
Trigger: ACATACCAACAGTGAAGCCAGGACAGCACCATGCCATCGGCGCTCCAGTCTGTCTGGCTGGGAGGAAAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp GTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTaGGTGTGGCAGGGGAGCTTGTCCGTTAGCTGGGAA +
Preference number: 3 (lower is better)
Translates to: VVCCMYVSMRGH*VWQGSLSVSWE
Trigger: TTCCCAGCTAACGGACAAGCTCCCCTGCCACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTGGGCTTGTGGGTGGCTaGGTGGCTACTGGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTGLVGG*VATGPH
Trigger: GTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTGGGCTTGTGGGTGGCTaGGTGGCTACTGGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: QGPLICIHPNERADLLSLGLVGG*VATGPH
Trigger: GTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTTCATTGGGAGGGGGCTaGTGGGTGGCTTGGTGGCTA +
Preference number: 3 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFSLGGG*WVAWWL
Trigger: TAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGA...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCTCCTTTGGAAATGCATaGGCCCAGAGGTGGTTTGAA +
Preference number: 3 (lower is better)
Translates to: LNSSPANPRVAACMGPAASFGNA*AQRWFE
Trigger: TTCAAACCACCTCTGGGCCAATGCATTTCCAAAGGA...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp GCAGGACACTGGAACGAGGTGCAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAGACACAGTCACTGGCGTaGAAGTCCTTTCTATCAGTG +
Preference number: 3 (lower is better)
Translates to: AGHWNEVQRQAAGLLLPKTQSLA*KSFLSV
Trigger: CACTGATAGAAAGGACTTCAACGCCAGTGACTGTGT...CTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATACACCAGCAAAGCTTTaGCATCACAGGGTTCCATCT +
Preference number: 3 (lower is better)
Translates to: GLVGGLVATGPHSLADPHTPAKL*HHRVPS
Trigger: AGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTGT...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp AGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTGCTCTGTCCTGCCGGAACACTaGCATAGGCTGCCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: RLRKQDCFSSHTVVLDCSVLPEH*HRLPCS
Trigger: AGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGAC...AGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 72 bp GTGTCTCCATTTGGGGTGACTGGTGAGGACGTGTGTTaGGTGGCCACTTCTGGTCCTGCCGGAACACTTGCA +
Preference number: 3 (lower is better)
Translates to: VSPFGVTGEDVC*VATSGPAGTLA
Trigger: TGCAAGTGTTCCGGCAGGACCAGAAGTGGCCACTCAACACACGTCCTCACCAGTCACCCCAAATGGAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR TCA 72 bp CTATGTCCCTGCTCCCTCCATCAAATGGGCTGTTTGTaGTGCCCTAAGACTTGGCCCTGCTCCAGCACAGGG +
Preference number: 3 (lower is better)
Translates to: LCPCSLHQMGCL*CPKTWPCSSTG
Trigger: CCCTGTGCTGGAGCAGGGCCAAGTCTTAGGGCATCACAAACAGCCCATTTGATGGAGGGAGCAGGGACATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 72 bp GTGCTGATAGGAGGAACAGCAGCTTCAGGTGAGGCCTaGGACACTGTTTGGTGGACGCTTGTGGCTCTCCTG +
Preference number: 3 (lower is better)
Translates to: VLIGGTAASGEA*DTVWWTLVALL
Trigger: CAGGAGAGCCACAAGCGTCCACCAAACAGTGTCTCAGGCCTCACCTGAAGCTGCTGTTCCTCCTATCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 72 bp TTAGACGGCCCTCCATGGCCCAGAAGTCTTCCCTGCTaGAGGTCGTGTGTGACACCCTCAGATACGCATCTG +
Preference number: 3 (lower is better)
Translates to: LDGPPWPRSLPC*RSCVTPSDTHL
Trigger: CAGATGCGTATCTGAGGGTGTCACACACGACCTTCAGCAGGGAAGACTTCTGGGCCATGGAGGGCCGTCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 72 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTaGTCTCCTGGAGATAGACGTTGCTGGAGGCTTCAA +
Preference number: 3 (lower is better)
Translates to: LLVLPEHLHRLP*SPGDRRCWRLQ
Trigger: TTGAAGCCTCCAGCAACGTCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR GCA 72 bp TGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTaGTTGGGAGACCCAGCTGGCAGGCAGTACTGGGCA +
Preference number: 3 (lower is better)
Translates to: CPGFTVGMSWGS*LGDPAGRQYWA
Trigger: TGCCCAGTACTGCCTGCCAGCTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTTCATTGGGAGGGGGCTaGTGGGTGGCTTGGTGGCTA +
Preference number: 3 (lower is better)
Translates to: QGPLICIHPNERADLLSLSLGGG*WVAWWL
Trigger: TAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGA...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCATCATTGGGAGGGGGCTaGTGGGTGGCTTGGTGGCTA +
Preference number: 3 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPSLGGG*WVAWWL
Trigger: TAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGA...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCCGAGAAAGGCATCCTTaGGAAATGCATTGGCCCAGA +
Preference number: 3 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTRERHP*EMHWPR
Trigger: TCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTCG...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCACAGACAGACTGATCTaGGTCTCAGAAACAATCCTG +
Preference number: 3 (lower is better)
Translates to: LNSSPANPRVAACMGPAATDRLI*VSETIL
Trigger: CAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGT...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGATGCCCTGGTCCTCTTaGCGGATCATCTTAATTTCC +
Preference number: 3 (lower is better)
Translates to: PVTNRKGERVPRPRADSVMPWSS*RIILIS
Trigger: GGAAATTAAGATGATCCGCAAAGAGGACCAGGGCAT...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CAA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGTCACTCTCCTGCTGCTaGATGGTGCCGTCCAGAGAT +
Preference number: 3 (lower is better)
Translates to: LADPHIVPLLLKVVVASWSLSCC*MVPSRD
Trigger: ATCTCTGGACGGCACCATCAAGCAGCAGGAGAGTGA...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR TCA 72 bp ACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTaGAGGTGGTGGTGGCTTCGTGGTAGGTCTGCAGTG +
Preference number: 3 (lower is better)
Translates to: TAWQTPISYPCY*RWWWLRGRSAV
Trigger: CACTGCAGACCTACCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR TCA 72 bp TCCACCGTCTTCCCAAGGCTGTGGTCAGGGAAACTATaGATGCGCTATGTGGGCTCAGTTGCACCTTGCAGG +
Preference number: 3 (lower is better)
Translates to: STVFPRLWSGKL*MRYVGSVAPCR
Trigger: CCTGCAAGGTGCAACTGAGCCCACATAGCGCATTCATAGTTTCCCTGACCACAGCCTTGGGAAGACGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 72 bp GGCCATGGGCAGAATGGACCGAGATGCCCTCACTTCTaGGGAATACAGCACACTGAAGGCCCGATGTGTTAC +
Preference number: 3 (lower is better)
Translates to: GHGQNGPRCPHF*GIQHTEGPMCY
Trigger: GTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGCATCTCGGTCCATTCTGCCCATGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 72 bp CAGTGCCTTATGCCCCAAACACACCAGCAAAGCTTTTaGATCACAGGGTTCCATCTCCTCGAGGGTGGCAGC +
Preference number: 3 (lower is better)
Translates to: QCLMPQTHQQSF*ITGFHLLEGGS
Trigger: GCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTGTGTTTGGGGCATAAGGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR GCA 72 bp CGAACCCTGGCCTCGACAATCCTTCAGGGGAGCCCGTaGCTCTCTGTAGAAAGAGGTATTCAAGGAGGAACT +
Preference number: 3 (lower is better)
Translates to: RTLASTILQGSP*LSVERGIQGGT
Trigger: AGTTCCTCCTTGAATACCTCTTTCTACAGAGAGGCACGGGCTCCCCTGAAGGATTGTCGAGGCCAGGGTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 72 bp CCGTCTTCCCAAGGCTGTGGTCAGGGAAACTATGAATaGGCTATGTGGGCTCAGTTGCACCTTGCAGGGCAA +
Preference number: 3 (lower is better)
Translates to: PSSQGCGQGNYE*AMWAQLHLAGQ
Trigger: TTGCCCTGCAAGGTGCAACTGAGCCCACATAGCGCATTCATAGTTTCCCTGACCACAGCCTTGGGAAGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp TCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTaGGTTTCACCAGTGAGGAGGCATGAAGTCCAAACC +
Preference number: 3 (lower is better)
Translates to: SGQGGCGPLSTS*VSPVRRHEVQT
Trigger: GGTTTGGACTTCATGCCTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CCA 72 bp CTCAGTTGCACCTTGCAGGGCAAGCAATGTTGGCACTaGCTGATTTTCAGACCTGTGGTCACCTCTCCCGAC +
Preference number: 3 (lower is better)
Translates to: LSCTLQGKQCWH*LIFRPVVTSPD
Trigger: GTCGGGAGAGGTGACCACAGGTCTGAAAATCAGCCAGTGCCAACATTGCTTGCCCTGCAAGGTGCAACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp TGTAACTGCCCTGGTCCCGCTCTGCCACCCCAAAGATaGTCAGGGAGTCGTCTTCCTTCTTCATCCTGTTTC +
Preference number: 3 (lower is better)
Translates to: CNCPGPALPPQR*SGSRLPSSSCF
Trigger: GAAACAGGATGAAGAAGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAGAGCGGGACCAGGGCAGTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR CCA 72 bp GGGATAATCTTCTCCGGAGTAACCGATGACGGACTCTaGCTCAGGGCCCTTCCCGAAGTCATTTTCAGCCTG +
Preference number: 3 (lower is better)
Translates to: GIIFSGVTDDGL*LRALPEVIFSL
Trigger: CAGGCTGAAAATGACTTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATCGGTTACTCCGGAGAAGATTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CAA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGCTCCCCTCCTCCCACTaGCAAAGTGGTGGCTGTGCC +
Preference number: 3 (lower is better)
Translates to: LTSEEYSTLKARCVTKQELPSSH*QSGGCA
Trigger: GGCACAGCCACCACTTTGCAAGTGGGAGGAGGGGAG...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACCCCATATCGTACCCTaGTTACTGAAGGTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQPHIVP*LLKVVV
Trigger: CACCACCACCTTCAGTAACAAGGGTACGATATGGGG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAATCATTGGGAGGGGGCTaGTGGGTGGCTTGGTGGCTA +
Preference number: 3 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQSLGGG*WVAWWL
Trigger: TAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGA...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCAAGAAAACAGAGACATaGGGTCTGGAGGGGAAGATG +
Preference number: 3 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIKKTET*GLEGKM
Trigger: CATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCTT...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATCCTTTTTGCCTATCTTaGCAAAAAGGATTCTCCTGG +
Preference number: 3 (lower is better)
Translates to: GLVGGLVATGPHSLADPHPFCLS*QKGFSW
Trigger: CCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGG...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCACACAGTCACTGGCGTaGAAGTCCTTTCTATCAGTG +
Preference number: 3 (lower is better)
Translates to: ERLKSEAVPMAADPFLGITQSLA*KSFLSV
Trigger: CACTGATAGAAAGGACTTCAACGCCAGTGACTGTGT...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGCTGTCCCGCCCAGCCTaGGTGACCAGATGGACCAAG +
Preference number: 3 (lower is better)
Translates to: LTSEEYSTLKARCVTKQELSRPA*VTRWTK
Trigger: CTTGGTCCATCTGGTCACCAAGGCTGGGCGGGACAG...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTATCCAGGTTGCTTCCTaGCCCATTCTTAAACCTCAC +
Preference number: 3 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPIQVAS*PILKPH
Trigger: GTGAGGTTTAAGAATGGGCAAGGAAGCAACCTGGAT...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CAA 90 bp TCTCCCATTGACCACAACCATCTCCAGCTTGTAGTTACTGTAGGGGAAGAGGCGGACCTCCAGGCGGACTaGGTTTTCAGCTTTGCCCAG +
Preference number: 3 (lower is better)
Translates to: SPIDHNHLQLVVTVGEEADLQAD*VFSFAQ
Trigger: CTGGGCAAAGCTGAAAACCAAGTCCGCCTGGAGGTC...CGCCTCTTCCCCTACAGTAACTACAAGCTGGAGATGGTTGTGGTCAATGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR TCA 72 bp GGCAATTCCACTTTCCTGCTGAGCTGGAGTGGACTCTaGCATGGGCTCCATGGAAAATGCACCCTCCTCTTC +
Preference number: 3 (lower is better)
Translates to: GNSTFLLSWSGL*HGLHGKCTLLF
Trigger: GAAGAGGAGGGTGCATTTTCCATGGAGCCCATGTCAGAGTCCACTCCAGCTCAGCAGGAAAGTGGAATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 72 bp TCCCATTTGGATGCTCAGGATGATCCCATTCCAGGTTaGTTGTCTCCAGGTTGGGCTGCCGGACTCGGAAAC +
Preference number: 3 (lower is better)
Translates to: SHLDAQDDPIPG*LSPGWAAGLGN
Trigger: GTTTCCGAGTCCGGCAGCCCAACCTGGAGACAATCAACCTGGAATGGGATCATCCTGAGCATCCAAATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR GCA 72 bp GCTGGGAACCTGGGAACTCCAGGGACAGATCAGCGCTaGATAAGGCATACAAAGAGCATTGAGTCCTCCCTA +
Preference number: 3 (lower is better)
Translates to: AGNLGTPGTDQR*IRHTKSIESSL
Trigger: TAGGGAGGACTCAATGCTCTTTGTATGCCTTATGCAGCGCTGATCTGTCCCTGGAGTTCCCAGGTTCCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR GCA 72 bp GTCAGGGAAACTATGAATGCGCTATGTGGGCTCAGTTaGACCTTGCAGGGCAAGCAATGTTGGCACTGGCTG +
Preference number: 3 (lower is better)
Translates to: VRETMNALCGLS*TLQGKQCWHWL
Trigger: CAGCCAGTGCCAACATTGCTTGCCCTGCAAGGTGCAACTGAGCCCACATAGCGCATTCATAGTTTCCCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 72 bp GCTGAGTTAACGCTGCCGGGGTACTTGGAATGGTCATaGCAGACCCCAGGTTGGAACTGGTCTTCTTCAAAC +
Preference number: 3 (lower is better)
Translates to: AELTLPGYLEWS*QTPGWNWSSSN
Trigger: GTTTGAAGAAGACCAGTTCCAACCTGGGGTCTGGCATGACCATTCCAAGTACCCCGGCAGCGTTAACTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR CCA 72 bp TTCCACTTTCCTGCTGAGCTGGAGTGGACTCTGACATaGGCTCCATGGAAAATGCACCCTCCTCTTCCCCAA +
Preference number: 3 (lower is better)
Translates to: FHFPAELEWTLT*APWKMHPPLPQ
Trigger: TTGGGGAAGAGGAGGGTGCATTTTCCATGGAGCCCATGTCAGAGTCCACTCCAGCTCAGCAGGAAAGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp TGTGGGCTCAGTTGCACCTTGCAGGGCAAGCAATGTTaGCACTGGCTGATTTTCAGACCTGTGGTCACCTCT +
Preference number: 3 (lower is better)
Translates to: CGLSCTLQGKQC*HWLIFRPVVTS
Trigger: AGAGGTGACCACAGGTCTGAAAATCAGCCAGTGCCAACATTGCTTGCCCTGCAAGGTGCAACTGAGCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp CTTTTTAAAATCAGGGCCCTCCTCCATGCTACTCCTTaGCCACCACGCAGAGCTCAAGCAGGATCCTTTGCC +
Preference number: 3 (lower is better)
Translates to: LFKIRALLHATP*PPRRAQAGSFA
Trigger: GGCAAAGGATCCTGCTTGAGCTCTGCGTGGTGGCCAAGGAGTAGCATGGAGGAGGGCCCTGATTTTAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGAAGAAAACAGAGACATaGGGTCTGGAGGGGAAGATG +
Preference number: 3 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVKKTET*GLEGKM
Trigger: CATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCTT...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTTGGCCCAGAGGTGGTTaGAATATTACAGCCTGTCTA +
Preference number: 3 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPWPRGG*NITACL
Trigger: TAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGACACAGTCACTGGCGTaGAAGTCCTTTCTATCAGTG +
Preference number: 3 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVTQSLA*KSFLSV
Trigger: CACTGATAGAAAGGACTTCAACGCCAGTGACTGTGT...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp TCTCCCATTGACCACAACCATCTCCAGCTTGTAGTTACTGTAGGGGAAGAGGCGACCAGGGAAGCTGGCTaGCTGTCTCTTCTGAGACAC +
Preference number: 3 (lower is better)
Translates to: SPIDHNHLQLVVTVGEEATREAG*LSLLRH
Trigger: GTGTCTCAGAAGAGACAGCAAGCCAGCTTCCCTGGT...CGCCTCTTCCCCTACAGTAACTACAAGCTGGAGATGGTTGTGGTCAATGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR TCA 72 bp GACAGATCAGCGCTGCATAAGGCATACAAAGAGCATTaGGTCCTCCCTAGGTGGGGGCATCACAACACTGAG +
Preference number: 3 (lower is better)
Translates to: DRSALHKAYKEH*VLPRWGHHNTE
Trigger: CTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGTATGCCTTATGCAGCGCTGATCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR TCA 72 bp AGCGGTAGCGTGACACGGGGTCCGTTCTTTGCACCGTaGACTTGGTCTGATTGGGAGAGAAGTTTTCCACTA +
Preference number: 3 (lower is better)
Translates to: SGSVTRGPFFAP*TWSDWERSFPL
Trigger: TAGTGGAAAACTTCTCTCCCAATCAGACCAAGTTCACGGTGCAAAGAACGGACCCCGTGTCACGCTACCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR TCA 72 bp CTGCAGGGGCTTGTTGTCCTCATCACTATAGTCAAATaGGCCATCCTCTTCCTTGGGGTCTTCAGGGCCAAG +
Preference number: 3 (lower is better)
Translates to: LQGLVVLITIVK*AILFLGVFRAK
Trigger: CTTGGCCCTGAAGACCCCAAGGAAGAGGATGGCTCATTTGACTATAGTGATGAGGACAACAAGCCCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR GCA 72 bp CACCTCCCAACCAAACCAGAGAGCAGCAAGGAGGCCTaGGCACCTTCTCCCTGCCAAAAATACTGTCATTTT +
Preference number: 3 (lower is better)
Translates to: HLPTKPESSKEA*APSPCQKYCHF
Trigger: AAAATGACAGTATTTTTGGCAGGGAGAAGGTGCGCAGGCCTCCTTGCTGCTCTCTGGTTTGGTTGGGAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CCA 72 bp AGCATTTTCTTCATACACAAAGGACAGTACAGAGCCTaGCAGGACACTGGAACGAGGTGCAGAGGCAGGCTG +
Preference number: 3 (lower is better)
Translates to: SIFFIHKGQYRA*QDTGTRCRGRL
Trigger: CAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGCCAGGCTCTGTACTGTCCTTTGTGTATGAAGAAAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp AGTACTGGGCAATTCCACTTTCCTGCTGAGCTGGAGTaGACTCTGACATGGGCTCCATGGAAAATGCACCCT +
Preference number: 3 (lower is better)
Translates to: STGQFHFPAELE*TLTWAPWKMHP
Trigger: AGGGTGCATTTTCCATGGAGCCCATGTCAGAGTCCACTCCAGCTCAGCAGGAAAGTGGAATTGCCCAGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp CAAGGCTGTGGTCAGGGAAACTATGAATGCGCTATGTaGGCTCAGTTGCACCTTGCAGGGCAAGCAATGTTG +
Preference number: 3 (lower is better)
Translates to: QGCGQGNYECAM*AQLHLAGQAML
Trigger: CAACATTGCTTGCCCTGCAAGGTGCAACTGAGCCCACATAGCGCATTCATAGTTTCCCTGACCACAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp TTCAGGGCCAAGGGGAACATCCTTCTTTTCTCGTACTaGGTACTTGCCGCCGCGACTCCTCTTGATGAAACA +
Preference number: 3 (lower is better)
Translates to: FRAKGNILLFSY*VLAAATPLDET
Trigger: TGTTTCATCAAGAGGAGTCGCGGCGGCAAGTACCCAGTACGAGAAAAGAAGGATGTTCCCCTTGGCCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CAA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGCCCCATATCGTACCCTaGTTACTGAAGGTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWPHIVP*LLKVVV
Trigger: CACCACCACCTTCAGTAACAAGGGTACGATATGGGG...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCACCCCATATCGTACCCTaGTTACTGAAGGTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPPHIVP*LLKVVV
Trigger: CACCACCACCTTCAGTAACAAGGGTACGATATGGGG...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp CAACAGGGTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTGGGTGTGTGGCCCAGAGGTGGTTaGAATATTACAGCCTGTCTA +
Preference number: 3 (lower is better)
Translates to: QQGCGLLYVCEHAWALGVWPRGG*NITACL
Trigger: TAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA...CACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCACAACCCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGACACAGTCACTGGCGTaGAAGTCCTTTCTATCAGTG +
Preference number: 3 (lower is better)
Translates to: LADPHIVPLLLKVVVASWTQSLA*KSFLSV
Trigger: CACTGATAGAAAGGACTTCAACGCCAGTGACTGTGT...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAAACACCAGCAAAGCTTTaGCATCACAGGGTTCCATCT +
Preference number: 3 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQTPAKL*HHRVPS
Trigger: AGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTGT...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTTCCCGACTTCAGGGCTaGCCAGGGGCAGGGGCAATG +
Preference number: 3 (lower is better)
Translates to: RLITDRLILVSETILFVFSRLQG*PGAGAM
Trigger: CATTGCCCCTGCCCCTGGCAAGCCCTGAAGTCGGGA...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGTGCCCGTGCCATTGCTaGGGCAAAGTTTCCCACTCC +
Preference number: 3 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLCPCHC*GKVSHS
Trigger: GGAGTGGGAAACTTTGCCCAAGCAATGGCACGGGCA...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGCCTTTTTGCCTATCTTaGCAAAAAGGATTCTCCTGG +
Preference number: 3 (lower is better)
Translates to: WTGWVWPSIYILGFTSEEPFCLS*QKGFSW
Trigger: CCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGG...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGCCTTTTTGCCTATCTTaGCAAAAAGGATTCTCCTGG +
Preference number: 3 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEPFCLS*QKGFSW
Trigger: CCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGG...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp AGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTGCTCTTCCTTTGGAAATGCATaGGCCCAGAGGTGGTTTGAA +
Preference number: 3 (lower is better)
Translates to: RLRKQDCFSSHTVVLDCSSFGNA*AQRWFE
Trigger: TTCAAACCACCTCTGGGCCAATGCATTTCCAAAGGA...AGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGTCCTTTGGAAATGCATaGGCCCAGAGGTGGTTTGAA +
Preference number: 3 (lower is better)
Translates to: TKSIESSLGGGITTLSTVSFGNA*AQRWFE
Trigger: TTCAAACCACCTCTGGGCCAATGCATTTCCAAAGGA...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTACACAGTCACTGGCGTaGAAGTCCTTTCTATCAGTG +
Preference number: 3 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFTQSLA*KSFLSV
Trigger: CACTGATAGAAAGGACTTCAACGCCAGTGACTGTGT...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp GTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGGAGACCCAGCTGGCATTGCTAATACCTTaGCGGCTTAAACATGTGGCA +
Preference number: 3 (lower is better)
Translates to: VLASLLVCLGVVAWETQLALLIP*RLKHVA
Trigger: TGCCACATGTTTAAGCCGCAAAGGTATTAGCAATGC...CAGCTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGTTCAAACAACCTTATaGGCTCAGTTCTGGGCTATG +
Preference number: 3 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTVQTTL*AQFWAM
Trigger: CATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAAC...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTCCCACGCCTCAGCGTTaGATCTCTCTGACCACCTGC +
Preference number: 3 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLPTPQR*ISLTTC
Trigger: GCAGGTGGTCAGAGAGATCAAACGCTGAGGCGTGGG...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTGCCACACCGTGGTTCTaGACTGCTCTGTCCCGCCCA +
Preference number: 3 (lower is better)
Translates to: RLITDRLILVSETILFVFATPWF*TALSRP
Trigger: TGGGCGGGACAGAGCAGTCAAGAACCACGGTGTGGC...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 72 bp GGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTaGGGAGGCATGAAGTCCAAACCCAGCCTTTTTCTT +
Preference number: 3 (lower is better)
Translates to: GVALYLHPGFHQ*GGMKSKPSLFL
Trigger: AAGAAAAAGGCTGGGTTTGGACTTCATGCCTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR TCA 72 bp GTCCAGGCAGCAGCCCTAGCTGAGGCTTGGCCCAAATaGCCATTACACACTCTCAGGTTCAAACAACCTTAT +
Preference number: 3 (lower is better)
Translates to: VQAAALAEAWPK*PLHTLRFKQPY
Trigger: ATAAGGTTGTTTGAACCTGAGAGTGTGTAATGGTCATTTGGGCCAAGCCTCAGCTAGGGCTGCTGCCTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR CCA 72 bp CTCCAAGACAATGTTGGAATCTGGATCGCTATCCCTTaGAAGCACTGCTTGGCAACAGGGTTGTGGTCTGCT +
Preference number: 3 (lower is better)
Translates to: LQDNVGIWIAIP*KHCLATGLWSA
Trigger: AGCAGACCACAACCCTGTTGCCAAGCAGTGCTTCCAAGGGATAGCGATCCAGATTCCAACATTGTCTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTA +
Preference number: 3 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPTGPHS*ADPHIV
Trigger: TACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGT...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTCAGTGTCCTACAGAATaGGCTGAGAAGATGATATCT +
Preference number: 3 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTQCPTE*AEKMIS
Trigger: AGATATCATCTTCTCAGCCAATTCTGTAGGACACTG...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR TCA 72 bp CAATGGGTACGCTGGCATGTACGGTGCAGTATGGAATaGGTGTCTGAGAAACTGACTACTCTGCTCAGATCC +
Preference number: 3 (lower is better)
Translates to: QWVRWHVRCSME*VSEKLTTLLRS
Trigger: GGATCTGAGCAGAGTAGTCAGTTTCTCAGACACTCATTCCATACTGCACCGTACATGCCAGCGTACCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 72 bp TTCAAAGGAGGCAGCTGTGGTGAGATGAAAGAACACTaGCTGGACAAGGAGTCAGAAGGCCCAAGTTCAAGC +
Preference number: 3 (lower is better)
Translates to: FKGGSCGEMKEH*LDKESEGPSSS
Trigger: GCTTGAACTTGGGCCTTCTGACTCCTTGTCCAGTCAGTGTTCTTTCATCTCACCACAGCTGCCTCCTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 72 bp GCATGTGGGGGATGTGGGAGACGCAGTAAAGAGGTATaGGAGGGTGAACCAGAAGGACAGATCTTAATACCT +
Preference number: 3 (lower is better)
Translates to: ACGGCGRRSKEV*EGEPEGQILIP
Trigger: AGGTATTAAGATCTGTCCTTCTGGTTCACCCTCTCATACCTCTTTACTGCGTCTCCCACATCCCCCACATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 72 bp ACCGAGATGCCCTCACTTCTGAGGAATACAGCACACTaGAGGCCCGATGTGTTACAAAGCAAGAGACACCAT +
Preference number: 3 (lower is better)
Translates to: TEMPSLLRNTAH*RPDVLQSKRHH
Trigger: ATGGTGTCTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGCATCTCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 72 bp GACACGGGGTCCGTTCTTTGCACCGTGAACTTGGTCTaGTTGGGAGAGAAGTTTTCCACTATCTGCTTTCCT +
Preference number: 3 (lower is better)
Translates to: DTGSVLCTVNLV*LGEKFSTICFP
Trigger: AGGAAAGCAGATAGTGGAAAACTTCTCTCCCAATCAGACCAAGTTCACGGTGCAAAGAACGGACCCCGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR GCA 72 bp AGCCTAGTCAAAGGAACTTCTAGAGTTACTGTAAGATaGCCAGCACTTTCCTCCCAGCCAGACAGACTGGAG +
Preference number: 3 (lower is better)
Translates to: SLVKGTSRVTVR*PALSSQPDRLE
Trigger: CTCCAGTCTGTCTGGCTGGGAGGAAAGTGCTGGGCATCTTACAGTAACTCTAGAAGTTCCTTTGACTAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCCCCCATATCGTACCCTaGTTACTGAAGGTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPPHIVP*LLKVVV
Trigger: CACCACCACCTTCAGTAACAAGGGTACGATATGGGG...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTA +
Preference number: 3 (lower is better)
Translates to: FKQPYWLSSGLWFLTSRETGPHS*ADPHIV
Trigger: TACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGT...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAATCCTTTGGAAATGCATaGGCCCAGAGGTGGTTTGAA +
Preference number: 3 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQSFGNA*AQRWFE
Trigger: TTCAAACCACCTCTGGGCCAATGCATTTCCAAAGGA...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGCGAGAAAGGCATCCTTaGGAAATGCATTGGCCCAGA +
Preference number: 3 (lower is better)
Translates to: LTSEEYSTLKARCVTKQERERHP*EMHWPR
Trigger: TCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTCG...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGACCACCTGCCTTCCTaGCTTGGGGAAAACTTAATT +
Preference number: 3 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQDHLPS*LGENLI
Trigger: AATTAAGTTTTCCCCAAGCAAGGAAGGCAGGTGGTC...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGTGCTTGGCAACAGGGTaGTGGTCTGCTGTATGTATG +
Preference number: 3 (lower is better)
Translates to: LTSEEYSTLKARCVTKQECLATG*WSAVCM
Trigger: CATACATACAGCAGACCACAACCCTGTTGCCAAGCA...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 72 bp TACCTTTGGTTTCAAAAATGCATTAGGTGGGGAGGATaGAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCT +
Preference number: 3 (lower is better)
Translates to: YLWFQKCIRWGG*RQHLRSENCRS
Trigger: AGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACCTAATGCATTTTTGAAACCAAAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR TCA 72 bp ACGCTGGCATGTACGGTGCAGTATGGAATGAGTGTCTaGGAAACTGACTACTCTGCTCAGATCCAAAGCGTT +
Preference number: 3 (lower is better)
Translates to: TLACTVQYGMSV*ETDYSAQIQSV
Trigger: AACGCTTTGGATCTGAGCAGAGTAGTCAGTTTCTCAGACACTCATTCCATACTGCACCGTACATGCCAGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 72 bp AATACCTCTGTTTCAAAGGAGGCAGCTGTGGTGAGATaGAAGAACACTGACTGGACAAGGAGTCAGAAGGCC +
Preference number: 3 (lower is better)
Translates to: NTSVSKEAAVVR*KNTDWTRSQKA
Trigger: GGCCTTCTGACTCCTTGTCCAGTCAGTGTTCTTTCATCTCACCACAGCTGCCTCCTTTGAAACAGAGGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR GCA 72 bp CCAGATGTCTCCAACCTCTCAGAGCACAAAGGAGGGTaGTGGTTTGGCTTTCCTGTTAGCTTAAATTCAACC +
Preference number: 3 (lower is better)
Translates to: PDVSNLSEHKGG*WFGFPVSLNST
Trigger: GGTTGAATTTAAGCTAACAGGAAAGCCAAACCAGCACCCTCCTTTGTGCTCTGAGAGGTTGGAGACATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp CCTCATCACTATAGTCAAATGAGCCATCCTCTTCCTTaGGGTCTTCAGGGCCAAGGGGAACATCCTTCTTTT +
Preference number: 3 (lower is better)
Translates to: PHHYSQMSHPLP*GLQGQGEHPSF
Trigger: AAAAGAAGGATGTTCCCCTTGGCCCTGAAGACCCCAAGGAAGAGGATGGCTCATTTGACTATAGTGATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR-3UTR CAA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTA +
Preference number: 3 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGTGPHS*ADPHIV
Trigger: TACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGT...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCTCATTGGGAGGGGGCTaGTGGGTGGCTTGGTGGCTA +
Preference number: 3 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILSLGGG*WVAWWL
Trigger: TAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGA...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGAAAGAAAACAGAGACATaGGGTCTGGAGGGGAAGATG +
Preference number: 3 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRKKTET*GLEGKM
Trigger: CATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCTT...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGACACAGTCACTGGCGTaGAAGTCCTTTCTATCAGTG +
Preference number: 3 (lower is better)
Translates to: LTSEEYSTLKARCVTKQETQSLA*KSFLSV
Trigger: CACTGATAGAAAGGACTTCAACGCCAGTGACTGTGT...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGTGTTTGTCTTTCATTTaGGGAGGCATGTGGGGGATG +
Preference number: 3 (lower is better)
Translates to: LTSEEYSTLKARCVTKQECLSFI*GGMWGM
Trigger: CATCCCCCACATGCCTCCCAAAATGAAAGACAAACA...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTAAAGAAAACAGAGACATaGGGTCTGGAGGGGAAGATG +
Preference number: 3 (lower is better)
Translates to: MHWPRGGLNITACLRVLVKKTET*GLEGKM
Trigger: CATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCTT...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGTGGCCCAGAGGTGGTTaGAATATTACAGCCTGTCTA +
Preference number: 3 (lower is better)
Translates to: PQCPTELAEKMISARDGRWPRGG*NITACL
Trigger: TAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGCCTAAGCTAGATGCCTaGTACCTATTTCCATTCTCC +
Preference number: 3 (lower is better)
Translates to: LTSEEYSTLKARCVTKQEPKLDA*YLFPFS
Trigger: GGAGAATGGAAATAGGTACAAGGCATCTAGCTTAGG...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR TCA 72 bp GGCATCCTTTGGAAATGCATTGGCCCAGAGGTGGTTTaGATATTACAGCCTGTCTACGTGTTCTGGTATGGA +
Preference number: 3 (lower is better)
Translates to: GILWKCIGPEVV*ILQPVYVFWYG
Trigger: TCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCATTTCCAAAGGATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR GCA 72 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATaGAGCTCACATCTTAGATATTCCAGAGAAAAGGGC +
Preference number: 3 (lower is better)
Translates to: CPLLFLKRLQSQ*SSHLRYSREKG
Trigger: GCCCTTTTCTCTGGAATATCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CCA 72 bp CACTCTCAGGTTCAAACAACCTTATTGGCTCAGTTCTaGGCTATGGTTTCTTACCAGCAGAGAGTGTGTGTC +
Preference number: 3 (lower is better)
Translates to: HSQVQTTLLAQF*AMVSYQQRVCV
Trigger: GACACACACTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAACCTGAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR CCA 72 bp AGAGCCCTTTGCATCTTATCTCACGCAACTTGGATGTaGACTAACCCTCTCCAAGACAATGTTGGAATCTGG +
Preference number: 3 (lower is better)
Translates to: RALCILSHATWM*TNPLQDNVGIW
Trigger: CCAGATTCCAACATTGTCTTGGAGAGGGTTAGTCCACATCCAAGTTGCGTGAGATAAGATGCAAAGGGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTA +
Preference number: 3 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKTGPHS*ADPHIV
Trigger: TACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGT...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGAAGAAAACAGAGACATaGGGTCTGGAGGGGAAGATG +
Preference number: 3 (lower is better)
Translates to: FKQPYWLSSGLWFLTSREKKTET*GLEGKM
Trigger: CATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCTT...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGCCTTTTTGCCTATCTTaGCAAAAAGGATTCTCCTGG +
Preference number: 3 (lower is better)
Translates to: LTSEEYSTLKARCVTKQEPFCLS*QKGFSW
Trigger: CCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGG...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR-3UTR CAA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCCAGTGTCCTACAGAATaGGCTGAGAAGATGATATCT +
Preference number: 3 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSQCPTE*AEKMIS
Trigger: AGATATCATCTTCTCAGCCAATTCTGTAGGACACTG...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
3UTR TCA 72 bp TCTATCTACATCCTGGGTTTCACCAGTGAGGAGGCATaGAGTCCAAACCCAGCCTTTTTCTTCTCTCTAGAA +
Preference number: 3 (lower is better)
Translates to: SIYILGFTSEEA*SPNPAFFFSLE
Trigger: TTCTAGAGAGAAGAAAAAGGCTGGGTTTGGACTTCATGCCTCCTCACTGGTGAAACCCAGGATGTAGATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CCA 72 bp AGAAAGGCATCCTTTGGAAATGCATTGGCCCAGAGGTaGTTTGAATATTACAGCCTGTCTACGTGTTCTGGT +
Preference number: 3 (lower is better)
Translates to: RKASFGNALAQR*FEYYSLSTCSG
Trigger: ACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCATTTCCAAAGGATGCCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCCCCATATCGTACCCTaGTTACTGAAGGTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILPHIVP*LLKVVV
Trigger: CACCACCACCTTCAGTAACAAGGGTACGATATGGGG...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR-3UTR CAA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGCCTTTTTGCCTATCTTaGCAAAAAGGATTCTCCTGG +
Preference number: 3 (lower is better)
Translates to: PQCPTELAEKMISARDGRPFCLS*QKGFSW
Trigger: CCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGG...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR TCA 72 bp ATGTACGGTGCAGTATGGAATGAGTGTCTGAGAAACTaGCTACTCTGCTCAGATCCAAAGCGTTTTCTGGAA +
Preference number: 3 (lower is better)
Translates to: MYGAVWNECLRN*LLCSDPKRFLE
Trigger: TTCCAGAAAACGCTTTGGATCTGAGCAGAGTAGTCAGTTTCTCAGACACTCATTCCATACTGCACCGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CCA 72 bp CACATATTTGAGAGTGTATCCAATCATGATCCCATTTaGATGCTCAGGATGATCCCATTCCAGGTTGATTGT +
Preference number: 3 (lower is better)
Translates to: HIFESVSNHDPI*MLRMIPFQVDC
Trigger: ACAATCAACCTGGAATGGGATCATCCTGAGCATCCAAATGGGATCATGATTGGATACACTCTCAAATATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR TCA 72 bp TTTGCATATCCTTGTCTGTACGATAGATCATTTCAATaGGATCAGCTCTGGGATTCCTTCACATGCCGAAAT +
Preference number: 3 (lower is better)
Translates to: FAYPCLYDRSFQ*DQLWDSFTCRN
Trigger: ATTTCGGCATGTGAAGGAATCCCAGAGCTGATCTCATTGAAATGATCTATCGTACAGACAAGGATATGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
CDS-3UTR GCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCACAGGGCGGCGGTGGCTaGCTGGCCATCCTCGGCACC +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPQGGGG*LAILGT
Trigger: GGTGCCGAGGATGGCCAGGCAGCCACCGCCGCCCTG...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGCAGGGCGGCGGTGGCTaGCTGGCCATCCTCGGCACC +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRQGGGG*LAILGT
Trigger: GGTGCCGAGGATGGCCAGGCAGCCACCGCCGCCCTG...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGTCCCGGGGCCGGTCTaGCCGTCCTTTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQVPGPV*PSFGQG
Trigger: GCCCTGCCCAAAGGACGGCCAGACCGGCCCCGGGAC...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000504476.5
CDS-3UTR GCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGAACGCTCGGGGTGGCTaGGAGACCGGGCAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRNARGG*ETGQGA
Trigger: GGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTT...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR GCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGAACGCTCGGGGTGGCTaGGAGACCGGGCAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQNARGG*ETGQGA
Trigger: GGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTT...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR GCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCAACGCTCGGGGTGGCTaGGAGACCGGGCAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLNARGG*ETGQGA
Trigger: GGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTT...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGCGGCGGTGGCTGCCTaGCCATCCTCGGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: GQGRTVWWNARGGCETGQAAVAA*PSSAPG
Trigger: GCCAGGTGCCGAGGATGGCCAGGCAGCCACCGCCGC...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGGCGGCGGTGGCTGCCTaGCCATCCTCGGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: QLSSATAPALPHWWHPGLAAVAA*PSSAPG
Trigger: GCCAGGTGCCGAGGATGGCCAGGCAGCCACCGCCGC...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp AGCCGCACGCTCCTCTCGGCCAGGTCGGTCAGCTCCAGGTCCCGGGGCCGGTCTAGGAGGAAGGCTGCATaGACCCAGGGCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: SRTLLSARSVSSRSRGRSRRKAA*TQGGGG
Trigger: GCCACCGCCGCCCTGGGTCCATGCAGCCTTCCTCCT...AGACCGGCCCCGGGACCTGGAGCTGACCGACCTGGCCGAGAGGAGCGTGCGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGTCCCGGGGCCGGTCTaGCCGTCCTTTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAVPGPV*PSFGQG
Trigger: GCCCTGCCCAAAGGACGGCCAGACCGGCCCCGGGAC...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCACAGGCTCCCTCCAGCTaGGCTCAGCCACGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPQAPSS*AQPRLQ
Trigger: CTGGAGCCGTGGCTGAGCTCAGCTGGAGGGAGCCTG...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR GCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCACCGGCCGCCCGCCACTaGGGAAGTCAATCACCAGGG +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPPAARH*GSQSPG
Trigger: CCCTGGTGATTGACTTCCGCAGTGGCGGGCGGCCGG...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGCCGTGGTGCCCCTTCTaGCCACCTGGTCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRPWCPF*PPGPRA
Trigger: TGCCCGAGGACCAGGTGGCCAGAAGGGGCACCACGG...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAGTGGAACGCTCGGGGTaGCTGCGAGACCGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPVERSG*LRDRAR
Trigger: CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCAC...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGGGCGGACAGTGTGGTaGAACGCTCGGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRGRTVW*NARGGC
Trigger: GCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCC...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGTGGCAGCATGGGCCCTaGCCACGTGGACAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQWQHGP*PRGQVP
Trigger: GGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCA...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCACAGCCGGAGGACGGCTaGGTTAACGCTGCCGGGGTA +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPQPEDG*VNAAGV
Trigger: TACCCCGGCAGCGTTAACTCAGCCGTCCTCCGGCTG...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAGCCGGAGGACGGCTaGGTTAACGCTGCCGGGGTA +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLQPEDG*VNAAGV
Trigger: TACCCCGGCAGCGTTAACTCAGCCGTCCTCCGGCTG...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGCAGAGGAGGAAGGCTaGATGGACCCAGGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAAEEEG*MDPGRR
Trigger: CCGCCGCCCTGGGTCCATGCAGCCTTCCTCCTCTGC...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGCCAGCTGCACCGTGGTaGCCCTTCTGGCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQPAAPW*PFWPPG
Trigger: ACCAGGTGGCCAGAAGGGGCACCACGGTGCAGCTGG...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp AGCCGCACGCTCCTCTCGGCCAGGTCGGTCAGCTCCAGGTCCCGGGGCCGGTCTGCCCTGGTCCCGCTCTaGCACCCCAAAGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: SRTLLSARSVSSRSRGRSALVPL*HPKDGQ
Trigger: CTGACCATCTTTGGGGTGGCAGAGCGGGACCAGGGC...AGACCGGCCCCGGGACCTGGAGCTGACCGACCTGGCCGAGAGGAGCGTGCGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTAGGAGGAAGGCTGCATaGACCCAGGGCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGARRKAA*TQGGGG
Trigger: GCCACCGCCGCCCTGGGTCCATGCAGCCTTCCTCCT...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGACCGTGGTGCCCCTTCTaGCCACCTGGTCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRPWCPF*PPGPRA
Trigger: TGCCCGAGGACCAGGTGGCCAGAAGGGGCACCACGG...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGGCTCGGATGGGAGGCTaGGGTGGCTGCTCCCAACCT +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAAARMGG*GGCSQP
Trigger: AGGTTGGGAGCAGCCACCCCAGCCTCCCATCCGAGC...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCTCGGTAGCGCTCGGATaGGAGGCTGGGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLSVALG*EAGVAA
Trigger: AGCAGCCACCCCAGCCTCCCATCCGAGCGCTACCGA...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCTGGGAGGACTCTCCGTaGTGGTGGTGGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLWEDSP*WWWRQQ
Trigger: CTGCTGCCGCCACCACCACCACGGAGAGTCCTCCCA...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGCCAGCTCTCCCACACTaGTGGCACCCGGGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQPALPH*WHPGLK
Trigger: CTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGG...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTTGGCAGCATGGGCCCTaGCCACGTGGACAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAWQHGP*PRGQVP
Trigger: GGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCA...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCCATCTCCTCGAGGGTaGCAGCATGGGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLPSPRG*QHGPWP
Trigger: TGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGG...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTGGAAGGACAGAGCCCTaGTCTGGCCCAGGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQAGRTEP*SGPGPL
Trigger: CAGGGGGCCTGGGCCAGACCAGGGCTCTGTCCTTCC...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGGAAGGACAGAGCCCTaGTCTGGCCCAGGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRGRTEP*SGPGPL
Trigger: CAGGGGGCCTGGGCCAGACCAGGGCTCTGTCCTTCC...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGGTGTCCCGGAAGATaGTGGTGTCTCCGGCCACCT +
Preference number: 4 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPGCPGR*WCLRPP
Trigger: AGGTGGCCGGAGACACCATCATCTTCCGGGACACCC...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGGGGTGTCCCGGAAGATaGTGGTGTCTCCGGCCACCT +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAAGCPGR*WCLRPP
Trigger: AGGTGGCCGGAGACACCATCATCTTCCGGGACACCC...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCACTCCGGAGTAACCGATaGCGGACTCTGGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPLRSNR*RTLAQG
Trigger: GCCCTGAGCCAGAGTCCGTCATCGGTTACTCCGGAG...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCACTGGTGACTCCTCTGTaGCGGCTTCCCCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPLVTPL*RLPQSP
Trigger: TGGGCTCTGGGGAAGCCGTCACAGAGGAGTCACCAG...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGCCGTCCAGAGATGTCTaGCTGCCCTGCAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQPSRDV*LPCRGL
Trigger: CAAGCCCCTGCAGGGCAGTCAGACATCTCTGGACGG...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGCCCAGCTCAGCAACTaGCAAGGCCGAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAAQLSN*QGRGRG
Trigger: CCCTCTGCCTCGGCCTTGTCAGTTGCTGAGCTGGGC...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGCCCAGCTCAGCAACTaGCAAGGCCGAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GQGRTVWWNARGGCETGQAQLSN*QGRGRG
Trigger: CCCTCTGCCTCGGCCTTGTCAGTTGCTGAGCTGGGC...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGCCCGCCCAGCCTTGGTaGCCAGATGGACCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRPAQPW*PDGPSS
Trigger: AGAGCTTGGTCCATCTGGTCACCAAGGCTGGGCGGG...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGCCACACCGTGGTTCTTaGCTGCTCTGTCCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRPHRGS*LLCPAQ
Trigger: CTGGGCGGGACAGAGCAGTCAAGAACCACGGTGTGG...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGCCAGCTGCACCGTGGTaGCCCTTCTGGCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: QLSSATAPALPHWWHPGLPAAPW*PFWPPG
Trigger: ACCAGGTGGCCAGAAGGGGCACCACGGTGCAGCTGG...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGACCCGACACTCCAGCTaGACCGTGGTGCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQTRHSS*TVVPLL
Trigger: CAGAAGGGGCACCACGGTGCAGCTGGAGTGTCGGGT...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGCCTAAGACTTGGCCCTaGTCCAGCACAGGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAAPKTWP*SSTGRQ
Trigger: CTGGCGCCCTGTGCTGGAGCAGGGCCAAGTCTTAGG...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGTGCCCGGCTTGCCTATaGCTCCCAGGGCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAACPACL*LPGPWS
Trigger: AGACCAAGGCCCTGGGAGGCATAGGCAAGCCGGGCA...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGCAGACCTCCTCCTCATaGACACCCGGGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQQTSSS*TPGGPW
Trigger: CCAAGGACCCCCGGGTGTCCATGAGGAGGAGGTCTG...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCACGAAGCACCATCTaGCTGCTCGCGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQAPRSTI*LLAVPW
Trigger: CCAGGGCACCGCGAGCAGCCAGATGGTGCTTCGTGG...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGATGGGAGGCTGGGGTaGCTGCTCCCAACCTCGTTG +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRDGRLG*LLPTSL
Trigger: CAACGAGGTTGGGAGCAGCCACCCCAGCCTCCCATC...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGCTCGGATGGGAGGCTaGGGTGGCTGCTCCCAACCT +
Preference number: 4 (lower is better)
Translates to: GQGRTVWWNARGGCETGQARMGG*GGCSQP
Trigger: AGGTTGGGAGCAGCCACCCCAGCCTCCCATCCGAGC...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTTCGGTAGCGCTCGGATaGGAGGCTGGGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQASVALG*EAGVAA
Trigger: AGCAGCCACCCCAGCCTCCCATCCGAGCGCTACCGA...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAATCGGTAGCGCTCGGATaGGAGGCTGGGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GQGRTVWWNARGGCETGQSVALG*EAGVAA
Trigger: AGCAGCCACCCCAGCCTCCCATCCGAGCGCTACCGA...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGACTCTCCGTGGTGGTaGTGGCGGCAGCAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPDSPWW*WRQQWL
Trigger: CAACCACTGCTGCCGCCACCACCACCACGGAGAGTC...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGTGGCTGTGCCTGGGTaGGCTCCGTTAGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRVAVPG*APLGQR
Trigger: TCTCTGGCCTAACGGAGCCCACCCAGGCACAGCCAC...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCCAGCTCTCCCACACTaGTGGCACCCGGGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAPALPH*WHPGLK
Trigger: CTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCAAGGGCGGACAGTGTaGTGGAACGCTCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQAQGRTV*WNARGG
Trigger: GCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTG...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGTGGGCCCTGGCCACGTaGACAGGTGCCCTCTACTCT +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRWALAT*TGALYS
Trigger: AGAGTAGAGGGCACCTGTCCACGTGGCCAGGGCCCA...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCCGGAGTGGTGACTaGGCAGGAGGTCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPGRSGD*AGGHSA
Trigger: TGCAGAGTGACCTCCTGCCCAGTCACCACTCCGGCC...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCACGGGGGTCCACGATGTaGTCCTTCGCTGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPRGSTM*SFADCL
Trigger: CAAGCAGTCAGCGAAGGATCACATCGTGGACCCCCG...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCGCTGGATGGTGTGGGTaGAGTGGAAGCGGGCGTTAC +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLAGWCG*SGSGRY
Trigger: GTAACGCCCGCTTCCACTTCACCCACACCATCCAGC...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCCAGCCGGAGGACGGCTaGGTTAACGCTGCCGGGGTA +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALQPEDG*VNAAGV
Trigger: TACCCCGGCAGCGTTAACTCAGCCGTCCTCCGGCTG...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCTCCGGAGTAACCGATaGCGGACTCTGGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGALRSNR*RTLAQG
Trigger: GCCCTGAGCCAGAGTCCGTCATCGGTTACTCCGGAG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCTGGTGACTCCTCTGTaGCGGCTTCCCCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGALVTPL*RLPQSP
Trigger: TGGGCTCTGGGGAAGCCGTCACAGAGGAGTCACCAG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCGTCCAGAGATGTCTaGCTGCCCTGCAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQAPSRDV*LPCRGL
Trigger: CAAGCCCCTGCAGGGCAGTCAGACATCTCTGGACGG...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGCCGTCTTCATTGAACTaGCCCTCGCCACCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAAPSSLN*PSPPSP
Trigger: TGGCGAGGGTGGCGAGGGTCAGTTCAATGAAGACGG...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGCAGGCTCCCTCCAGCTaGGCTCAGCCACGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWQAPSS*AQPRLQ
Trigger: CTGGAGCCGTGGCTGAGCTCAGCTGGAGGGAGCCTG...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGGGGGCATCACAACACTaGGTACGGTGCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAAGASQH*VRCHLR
Trigger: CCTGAGGTGGCACCGTACTCAGTGTTGTGATGCCCC...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGGGCATCACAACACTaGGTACGGTGCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPGASQH*VRCHLR
Trigger: CCTGAGGTGGCACCGTACTCAGTGTTGTGATGCCCC...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CAAGGTGGGAGGCAGCTGTCCCCTGACCGATGGCAGTGTACTTCCCGAACCCTGTTCCCCCGCGTCCCCTaGAGCGCCTCTCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: QGGRQLSPDRWQCTSRTLFPRVP*SASRRQ
Trigger: CTGGCGGCGAGAGGCGCTGCAGGGGACGCGGGGGAA...CAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTCCCACCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339876.11
CDS-3UTR GCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCAGGGCGGCGGTGGCTaGCTGGCCATCCTCGGCACC +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPQGGGG*LAILGT
Trigger: GGTGCCGAGGATGGCCAGGCAGCCACCGCCGCCCTG...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGAAGCACCATCTGGCTaGTCGCGGTGCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: GQGRTVWWNARGGCETGQEAPSG*SRCPGD
Trigger: ATCCCCAGGGCACCGCGAGCAGCCAGATGGTGCTTC...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAGCACCATCTGGCTaGTCGCGGTGCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAEAPSG*SRCPGD
Trigger: ATCCCCAGGGCACCGCGAGCAGCCAGATGGTGCTTC...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTACCCGACACTCCAGCTaGACCGTGGTGCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQATRHSS*TVVPLL
Trigger: CAGAAGGGGCACCACGGTGCAGCTGGAGTGTCGGGT...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCACGACACACGTGTAACTaGCCTGGTCCCGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPRHTCN*PGPALP
Trigger: TGGCAGAGCGGGACCAGGGCAGTTACACGTGTGTCG...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGCGACACACGTGTAACTaGCCTGGTCCCGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAARHTCN*PGPALP
Trigger: TGGCAGAGCGGGACCAGGGCAGTTACACGTGTGTCG...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGAAAAGGTGAGCGTGTaGCGAGGCCAAGGGCGGACA +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQEKVSV*RGQGRT
Trigger: TGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTC...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR GCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCGAAAAGGTGAGCGTGTaGCGAGGCCAAGGGCGGACA +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLEKVSV*RGQGRT
Trigger: TGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTC...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR GCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGAAAAGGTGAGCGTGTaGCGAGGCCAAGGGCGGACA +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDREKVSV*RGQGRT
Trigger: TGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTC...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR GCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGAGCAGCAAGGAGGCCTaGGCACCTTCTCCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQSSKEA*APSPCQ
Trigger: TTGGCAGGGAGAAGGTGCGCAGGCCTCCTTGCTGCT...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCACTGCCTCCTGAATCCTaGAATCCCCACGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPLPPES*NPHASA
Trigger: CGCTGAGGCGTGGGGATTGCAGGATTCAGGAGGCAG...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCCTCCCAGGAACCTaGTGGCCACTGAGAAGGGAT +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPGLPGT*WPLRRD
Trigger: ATCCCTTCTCAGTGGCCAGCAGGTTCCTGGGAGGCC...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGAGGAGGAAGGCTGCATaGACCCAGGGCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWRRKAA*TQGGGG
Trigger: GCCACCGCCGCCCTGGGTCCATGCAGCCTTCCTCCT...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGTACCATGCGATGTCTaGTGTTGGGACCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQVPCDV*CWDPGG
Trigger: GCCTCCGGGGTCCCAACACCAGACATCGCATGGTAC...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGCGCTGCCGGGGTACTTaGAATGGTCATGCCAGACCC +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRRCRGT*NGHARP
Trigger: GGGTCTGGCATGACCATTCCAAGTACCCCGGCAGCG...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCACGCTGCCGGGGTACTTaGAATGGTCATGCCAGACCC +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPRCRGT*NGHARP
Trigger: GGGTCTGGCATGACCATTCCAAGTACCCCGGCAGCG...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCGCTGCCGGGGTACTTaGAATGGTCATGCCAGACCC +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLRCRGT*NGHARP
Trigger: GGGTCTGGCATGACCATTCCAAGTACCCCGGCAGCG...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCACGCTGCCGGGGTACTTaGAATGGTCATGCCAGACCC +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPRCRGT*NGHARP
Trigger: GGGTCTGGCATGACCATTCCAAGTACCCCGGCAGCG...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGCCAATGAACCAGCCCTaGGTGGCGATGTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPPMNQP*VAMSAW
Trigger: CCAAGCGGACATCGCCACCCAGGGCTGGTTCATTGG...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGGTGGCTGTGCCTGGGTaGGCTCCGTTAGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: QLSSATAPALPHWWHPGLVAVPG*APLGQR
Trigger: TCTCTGGCCTAACGGAGCCCACCCAGGCACAGCCAC...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCATTGGGAGGGGGCTTGTaGGTGGCTTGGTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPLGGGL*VAWWLL
Trigger: CAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAA...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTAGGTGCCCTCTACTCTaGACAGGGTGGGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQARCPLL*TGWVWP
Trigger: GGGCCACACCCACCCTGTCCAGAGTAGAGGGCACCT...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGCGGAGGCTGTGCCCATaGCAGCTGATCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAARRLCP*QLIHSW
Trigger: CCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCG...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGAACAGGGCCCAACCCTaGTGGCCTTTCCCACTCCTC +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRNRAQP*WPFPLL
Trigger: GAGGAGTGGGAAAGGCCACCAGGGTTGGGCCCTGTT...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGCTGGATGGTGTGGGTaGAGTGGAAGCGGGCGTTAC +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRAGWCG*SGSGRY
Trigger: GTAACGCCCGCTTCCACTTCACCCACACCATCCAGC...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGCTGGATGGTGTGGGTaGAGTGGAAGCGGGCGTTAC +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARAGWCG*SGSGRY
Trigger: GTAACGCCCGCTTCCACTTCACCCACACCATCCAGC...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAGCACATCCAGCACACTaGCAAAGGCGTTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPAHPAH*QRRWPA
Trigger: TGCTGGCCAACGCCTTTGTCAGTGTGCTGGATGTGC...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGGCACATCCAGCACACTaGCAAAGGCGTTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAAAHPAH*QRRWPA
Trigger: TGCTGGCCAACGCCTTTGTCAGTGTGCTGGATGTGC...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGTCAGCCAGGAGACGGTaGGTTTCAGGGAGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARSARRR*VSGRGR
Trigger: ACGACCCCTCCCTGAAACTCACCGTCTCCTGGCTGA...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGCACGGAACTGGTAGTTaGCATACGGGGACAGCCGGA +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRHGTGS*HTGTAG
Trigger: TCCGGCTGTCCCCGTATGTCAACTACCAGTTCCGTG...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCACACGGAACTGGTAGTTaGCATACGGGGACAGCCGGA +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPHGTGS*HTGTAG
Trigger: TCCGGCTGTCCCCGTATGTCAACTACCAGTTCCGTG...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGATTCGGGGGTGCTGGTaGCTCCTCTGTGACGGCTTC +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARIRGCW*LLCDGF
Trigger: GAAGCCGTCACAGAGGAGTCACCAGCACCCCCGAAT...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCACACTCTCCTGCTGCTTaGTGGTGCCGTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPHSPAA*WCRPEM
Trigger: CATCTCTGGACGGCACCATCAAGCAGCAGGAGAGTG...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCAGGAGCCGTCTTCATTaGACTGACCCTCGCCACCCT +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLRSRLH*TDPRHP
Trigger: AGGGTGGCGAGGGTCAGTTCAATGAAGACGGCTCCT...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGGTGAGGACGTGTGTTaGGTGGCCACTTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRGEDVC*VATSGP
Trigger: AGGACCAGAAGTGGCCACTCAACACACGTCCTCACC...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGTGTGCCCATGGCAGCTaGTCCATTCCTGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRCAHGS*SIPGDQ
Trigger: CTGATCCCCAGGAATGGATCAGCTGCCATGGGCACA...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGGGGAGGGCACTGGTCTaGCTCTGCCCGGCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWGRALV*LCPACL
Trigger: TAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCC...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGGCCGTCCTAGCACGGTaGGGTAGGCCTTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWAVLAR*GRPWPG
Trigger: ACCTGGCCAAGGCCTACCTCACCGTGCTAGGACGGC...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404076.5
CDS-3UTR GCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCGCAGAGGAGGAAGGCTaGATGGACCCAGGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTAEEEG*MDPGRR
Trigger: CCGCCGCCCTGGGTCCATGCAGCCTTCCTCCTCTGC...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCCAGCAGGAGGTCCATaGCACGAAGCACCATCTGGC +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAPAGGP*HEAPSG
Trigger: GCCAGATGGTGCTTCGTGGCATGGACCTCCTGCTGG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGCTCACCGAGATCGTGTaGCGGATGCTGCCCATCTTG +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRLTEIV*RMLPIL
Trigger: CAAGATGGGCAGCATCCGGCACACGATCTCGGTGAG...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTTTCAGGGAGGGGTCGTaGTTCACCCGACACTCCAGC +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQAFREGS*FTRHSS
Trigger: GCTGGAGTGTCGGGTGAAGCACGACCCCTCCCTGAA...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAGCCCTGGTCCCGCTCTaGCACCCCAAAGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAEALVPL*HPKDGQ
Trigger: CTGACCATCTTTGGGGTGGCAGAGCGGGACCAGGGC...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAACGACACACGTGTAACTaGCCTGGTCCCGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GQGRTVWWNARGGCETGQRHTCN*PGPALP
Trigger: TGGCAGAGCGGGACCAGGGCAGTTACACGTGTGTCG...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGTCTCCAGGTTGGGCTaGCGGACTCGGAAACGCCTA +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRVSRLG*RTRKRL
Trigger: TAGGCGTTTCCGAGTCCGGCAGCCCAACCTGGAGAC...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGTCCCCAGAGCCCACCTaGGTCCTGGCGCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWSPEPT*VLALRV
Trigger: TACCCTCAGCGCCAGGACGCAGGTGGGCTCTGGGGA...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR GCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCTCCTGCCGGAACACTTaGATAGGCTGCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLSCRNT*IGCPAL
Trigger: GAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGA...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGGCCACTTCTGGTCCTaGCGGAACACTTGCATAGGC +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQGHFWS*RNTCIG
Trigger: GCCTATGCAAGTGTTCCGGCAGGACCAGAAGTGGCC...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGACCGTGGTTCTTGACTaGTCTGTCCCGCCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPTVVLD*SVPPSL
Trigger: AAGGCTGGGCGGGACAGAGCAGTCAAGAACCACGGT...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGCGCTGCCCGTGCCATTaGTTGGGCAAAGTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRRCPCH*LGKVSH
Trigger: GTGGGAAACTTTGCCCAAGCAATGGCACGGGCAGCG...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAGTGTCCAGTGGAAGCTaGGGGCAGGGTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPVSSGS*GQGSLL
Trigger: CAAAAGGGAACCCTGCCCCCAGCTTCCACTGGACAC...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGCTGTTTCGTGTCCAGTaGAAGCTGGGGGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRLFRVQ*KLGAGF
Trigger: GAACCCTGCCCCCAGCTTCCACTGGACACGAAACAG...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAAAAGGAGCGCCCTCTTaGACCACGACAGGGTCTAGG +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPKGAPS*TTTGSR
Trigger: CCTAGACCCTGTCGTGGTCCAAGAGGGCGCTCCTTT...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGTTCTGCTGGATGGTGTaGGTGAAGTGGAAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPFCWMV*VKWKRA
Trigger: CGCCCGCTTCCACTTCACCCACACCATCCAGCAGAA...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCTTCTGCTGGATGGTGTaGGTGAAGTGGAAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLFCWMV*VKWKRA
Trigger: CGCCCGCTTCCACTTCACCCACACCATCCAGCAGAA...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCACTGCTCGCGGTGCCCTaGGGATACATGAAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPLLAVP*GYMKLG
Trigger: ACCAAGCTTCATGTATCCCCAGGGCACCGCGAGCAG...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCACGAAGCACCATCTaGCTGCTCGCGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVPRSTI*LLAVPW
Trigger: CCAGGGCACCGCGAGCAGCCAGATGGTGCTTCGTGG...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGTACCATGCGATGTCTaGTGTTGGGACCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARVPCDV*CWDPGG
Trigger: GCCTCCGGGGTCCCAACACCAGACATCGCATGGTAC...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGCCCTGCTGCTGATCTaGGTGTCCCGGAAGATGATG +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPALLLI*VSRKMM
Trigger: CATCATCTTCCGGGACACCCAGATCAGCAGCAGGGC...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGGTCCCGGGGCCGGTCTaGCCGTCCTTTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVVPGPV*PSFGQG
Trigger: GCCCTGCCCAAAGGACGGCCAGACCGGCCCCGGGAC...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
CDS-3UTR CCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGCCGGGGTACTTGGAATaGTCATGCCAGACCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAAPGYLE*SCQTPG
Trigger: ACCTGGGGTCTGGCATGACCATTCCAAGTACCCCGG...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCCGGGGTACTTGGAATaGTCATGCCAGACCCCAGGT +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLPGYLE*SCQTPG
Trigger: ACCTGGGGTCTGGCATGACCATTCCAAGTACCCCGG...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCACCGGGGTACTTGGAATaGTCATGCCAGACCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPPGYLE*SCQTPG
Trigger: ACCTGGGGTCTGGCATGACCATTCCAAGTACCCCGG...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAATAGGGCACGTAGACTaGGGTCTGCCCCACCACGTA +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPIGHVD*GLPHHV
Trigger: TACGTGGTGGGGCAGACCCCAGTCTACGTGCCCTAT...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTACCGATGACGGACTCTaGCTCAGGGCCCTTCCCGAA +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQATDDGL*LRALPE
Trigger: TTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATCGGT...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCAGCCATCCTCTTCCTTaGGGTCTTCAGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLSHPLP*GLQGQG
Trigger: CCCTTGGCCCTGAAGACCCCAAGGAAGAGGATGGCT...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAGGCTTGTGGGTGGCTTaGTGGCTACTGGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPGLWVA*WLLVLT
Trigger: TGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCC...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGGCTTGTGGGTGGCTTaGTGGCTACTGGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQGLWVA*WLLVLT
Trigger: TGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCC...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGGCTTGTGGGTGGCTTaGTGGCTACTGGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRGLWVA*WLLVLT
Trigger: TGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCC...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAGAGGGGGCTTGTGGGTaGCTTGGTGGCTACTGGTCC +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAEEGACG*LGGYWS
Trigger: GGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTC...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGCCAGCTCTCCCACACTaGTGGCACCCGGGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWPALPH*WHPGLK
Trigger: CTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGG...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGAGGACGTGTGTTGAGTaGCCACTTCTGGTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPRTCVE*PLLVLP
Trigger: CGGCAGGACCAGAAGTGGCCACTCAACACACGTCCT...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGACGGAGGCTGTGCCCATaGCAGCTGATCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRRRLCP*QLIHSW
Trigger: CCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCG...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGCAGTGGGCGCAGCCCTaGGATAATCTTCTCCGGAGT +
Preference number: 4 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPQWAQP*DNLLRS
Trigger: ACTCCGGAGAAGATTATCCCAGGGCTGCGCCCACTG...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCCGGGGGTCCACGATGTaGTCCTTCGCTGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALRGSTM*SFADCL
Trigger: CAAGCAGTCAGCGAAGGATCACATCGTGGACCCCCG...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCTCAGCCAGGAGACGGTaGGTTTCAGGGAGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALSARRR*VSGRGR
Trigger: ACGACCCCTCCCTGAAACTCACCGTCTCCTGGCTGA...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCACGGAACTGGTAGTTaGCATACGGGGACAGCCGGA +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAHGTGS*HTGTAG
Trigger: TCCGGCTGTCCCCGTATGTCAACTACCAGTTCCGTG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAACTCTCCGCCTCCACTTaGCAATGTAGCGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GQGRTVWWNARGGCETGQLSAST*QCSAGW
Trigger: CCAACCTGCGCTACATTGTCAAGTGGAGGCGGAGAG...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGTAAAGCGGTAGCGTaGCACGGGGTCCGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARGKAVA*HGVRSL
Trigger: CAAAGAACGGACCCCGTGTCACGCTACCGCTTTACC...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAATTCGGGGGTGCTGGTaGCTCCTCTGTGACGGCTTC +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAEIRGCW*LLCDGF
Trigger: GAAGCCGTCACAGAGGAGTCACCAGCACCCCCGAAT...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGTGCGACAGTTGGGATaGTGGGGACTGTTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQVRQLG*WGLLWL
Trigger: AAGCCACAACAGTCCCCATCATCCCAACTGTCGCAC...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGTGTTGGGGAGCACCGTaGCGTTCCATATGGACTGCT +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRCWGAP*RSIWTA
Trigger: AGCAGTCCATATGGAACGTCACGGTGCTCCCCAACA...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGACACTCTCCTGCTGCTTaGTGGTGCCGTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRHSPAA*WCRPEM
Trigger: CATCTCTGGACGGCACCATCAAGCAGCAGGAGAGTG...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAACACTCTCCTGCTGCTTaGTGGTGCCGTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: GQGRTVWWNARGGCETGQHSPAA*WCRPEM
Trigger: CATCTCTGGACGGCACCATCAAGCAGCAGGAGAGTG...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAAACCAACAGAAAAGGTaGGCGTGTGCCGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPNQQKR*ACAEAK
Trigger: CTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTT...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAAACCAACAGAAAAGGTaGGCGTGTGCCGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPNQQKR*ACAEAK
Trigger: CTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTT...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGAGGGCAGGGGAGGAATaGGGAGCAAGAGGTAAACAC +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQRAGEE*GARGKH
Trigger: GTGTTTACCTCTTGCTCCTCATTCCTCCCCTGCCCT...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAGCATACAAAGAGCATTaGGTCCTCCCTAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPAYKEH*VLPRWG
Trigger: CCCCCACCTAGGGAGGACTCAATGCTCTTTGTATGC...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCATTTGGGGTGACTGGTaGGGACGTGTGTTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLIWGDW*GRVLSG
Trigger: GCCACTCAACACACGTCCTCACCAGTCACCCCAAAT...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGATTTGGGGTGACTGGTaGGGACGTGTGTTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQIWGDW*GRVLSG
Trigger: GCCACTCAACACACGTCCTCACCAGTCACCCCAAAT...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAATTTGGGGTGACTGGTaGGGACGTGTGTTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPIWGDW*GRVLSG
Trigger: GCCACTCAACACACGTCCTCACCAGTCACCCCAAAT...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCGCAGCACCTTCGGTCTaGGAACTGCAGGTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALAAPSV*ELQVCE
Trigger: CTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGC...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAATGTGCCCATGGCAGCTaGTCCATTCCTGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: GQGRTVWWNARGGCETGQCAHGS*SIPGDQ
Trigger: CTGATCCCCAGGAATGGATCAGCTGCCATGGGCACA...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCATCTGCTGTATGTATGTaGGCATGCGTGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPSAVCM*ACVGTG
Trigger: CCCAGTGCCCACGCATGCTCACATACATACAGCAGA...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAAGAAGTCTTCCCTGCTaGAGGTCGTGTGTGACACCC +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPRSLPC*RSCVTP
Trigger: GGGTGTCACACACGACCTTCAGCAGGGAAGACTTCT...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTGCAGAGGAGGAAGGCTaGATGGACCCAGGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPAEEEG*MDPGRR
Trigger: CCGCCGCCCTGGGTCCATGCAGCCTTCCTCCTCTGC...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGCCGGCCGCCCGCCACTaGGGAAGTCAATCACCAGGG +
Preference number: 4 (lower is better)
Translates to: MVKGGHWSDSARLAYASQPAARH*GSQSPG
Trigger: CCCTGGTGATTGACTTCCGCAGTGGCGGGCGGCCGG...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACCCGGCCGCCCGCCACTaGGGAAGTCAATCACCAGGG +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNPAARH*GSQSPG
Trigger: CCCTGGTGATTGACTTCCGCAGTGGCGGGCGGCCGG...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp AGCCGCACGCTCCTCTCGGCCAGGTCGGTCAGCTCCAGGTCCCGGGGCCGGTCTTCGGTCTGCATGTCCTaGAGCATCACGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SRTLLSARSVSSRSRGRSSVCMS*SITLEK
Trigger: CTTCTCCAACGTGATGCTGCAGGACATGCAGACCGA...AGACCGGCCCCGGGACCTGGAGCTGACCGACCTGGCCGAGAGGAGCGTGCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR GCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAAGATCGTGTGCCGGATaGTGCCCATCTTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPRSCAG*CPSCWR
Trigger: CCTCCAACAAGATGGGCAGCATCCGGCACACGATCT...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGCTCGTTGGAGGTGTTaGACTGGTACACAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRARWRC*TGTQPC
Trigger: GCAGGGCTGTGTACCAGTGCAACACCTCCAACGAGC...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGCTTGGTCTAGCTCGGTaGTGGCGACACACGTGTAAC +
Preference number: 4 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPLGLAR*WRHTCN
Trigger: GTTACACGTGTGTCGCCAGCACCGAGCTAGACCAAG...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGTCGTCACTCTCCTGCTaGTTGATGGTGCCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRSSLSC*LMVPSR
Trigger: TCTGGACGGCACCATCAAGCAGCAGGAGAGTGACGA...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR GCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCTGTCGTCACTCTCCTaGTGCTTGATGGTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGALSSLS*CLMVPS
Trigger: GGACGGCACCATCAAGCAGCAGGAGAGTGACGACAG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR GCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGTCCTGCCGGAACACTTaGATAGGCTGCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QLSSATAPALPHWWHPGLSCRNT*IGCPAL
Trigger: GAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGA...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGCTTCAGGGGAGCCCGTaGCTCTCTGTAGAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAALQGSP*LSVERG
Trigger: ACCTCTTTCTACAGAGAGGCACGGGCTCCCCTGAAG...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCGGCTCAGTTGCACCTTaGAGGGCAAGCAATGTTGGC +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLGSVAP*RASNVG
Trigger: GCCAACATTGCTTGCCCTGCAAGGTGCAACTGAGCC...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCAGGGCCCTCCTCCATaGTACTCCTTGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVQGPPP*YSLATT
Trigger: CGTGGTGGCCAAGGAGTAGCATGGAGGAGGGCCCTG...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGCCCTGCTGCCTCTCTaGACCCTGTGGCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTALLPL*TLWPWA
Trigger: TGCCCATGGCCACAGGGTGCAGAGAGGCAGCAGGGC...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTGCGGCGGTGGCTGCCTaGCCATCCTCGGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPAAVAA*PSSAPG
Trigger: GCCAGGTGCCGAGGATGGCCAGGCAGCCACCGCCGC...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGGTGTCCAGTGGAAGCTaGGGGCAGGGTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: QLSSATAPALPHWWHPGLVSSGS*GQGSLL
Trigger: CAAAAGGGAACCCTGCCCCCAGCTTCCACTGGACAC...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CTGCCCCACCACGTAGCGAGAGCCCCACACTGTGACGTTGTTCCAGGCCTCTCGCCACGAAGCACCATCTaGCTGCTCGCGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LPHHVARAPHCDVVPGLSPRSTI*LLAVPW
Trigger: CCAGGGCACCGCGAGCAGCCAGATGGTGCTTCGTGG...CGAGAGGCCTGGAACAACGTCACAGTGTGGGGCTCTCGCTACGTGGTGGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCACCTCACGGTTTaGGTTAGGTGGTGCCGATTG +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARGHLTV*VRWCRL
Trigger: CAATCGGCACCACCTAACCCAAACCGTGAGGTGGCC...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGGCCACCTCACGGTTTaGGTTAGGTGGTGCCGATTG +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRGHLTV*VRWCRL
Trigger: CAATCGGCACCACCTAACCCAAACCGTGAGGTGGCC...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGGCCACCTCACGGTTTaGGTTAGGTGGTGCCGATTG +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAGHLTV*VRWCRL
Trigger: CAATCGGCACCACCTAACCCAAACCGTGAGGTGGCC...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCATCGCAGTGTGGGGATaGGAGACCCAAAGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLIAVWG*ETQRKG
Trigger: GCCCTTTCTTTGGGTCTCCCATCCCCACACTGCGAT...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAACCTCCAGGCGGACTTaGTTTTCAGCTTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPTSRRT*FSALPR
Trigger: CCTGGGCAAAGCTGAAAACCAAGTCCGCCTGGAGGT...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCGTGGTGCCCCTTCTaGCCACCTGGTCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRPWCPF*PPGPRA
Trigger: TGCCCGAGGACCAGGTGGCCAGAAGGGGCACCACGG...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCACTGCCACCCCAAAGATaGTCAGGGAGTCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPLPPQR*SGSRLP
Trigger: AGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAG...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGCTGCCACCCCAAAGATaGTCAGGGAGTCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQLPPQR*SGSRLP
Trigger: AGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAG...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGCTCGGATGGGAGGCTaGGGTGGCTGCTCCCAACCT +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTARMGG*GGCSQP
Trigger: AGGTTGGGAGCAGCCACCCCAGCCTCCCATCCGAGC...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAACCGATGACGGACTCTaGCTCAGGGCCCTTCCCGAA +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAETDDGL*LRALPE
Trigger: TTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATCGGT...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGAGTGGTGGCTGTGCCTaGGTGGGCTCCGTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWSGGCA*VGSVRP
Trigger: TGGCCTAACGGAGCCCACCCAGGCACAGCCACCACT...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCACTGGTCCTCACAGCTTaGCAGACCCCCATATCGTAC +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPLVLTA*QTPISY
Trigger: GTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTGTGGAACGCTCGGGGTaGCTGCGAGACCGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTAVERSG*LRDRAR
Trigger: CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCAC...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAGTGGAACGCTCGGGGTaGCTGCGAGACCGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRVERSG*LRDRAR
Trigger: CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCAC...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGTGGGCCCTGGCCACGTaGACAGGTGCCCTCTACTCT +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWWALAT*TGALYS
Trigger: AGAGTAGAGGGCACCTGTCCACGTGGCCAGGGCCCA...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAAGACCTGCTCAGTCTTaGGGCAAGTCCCCATCCACA +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPRPAQS*GKSPST
Trigger: TGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCT...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCATTGAGTGGCCACTTCTaGTCCTGCCGGAACACTTGC +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPLSGHF*SCRNTC
Trigger: GCAAGTGTTCCGGCAGGACCAGAAGTGGCCACTCAA...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAAGTCACCAGGTGGTGTaGCAGACTTGCTCATCGTCC +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPSHQVV*QTCSSS
Trigger: GGACGATGAGCAAGTCTGCCACACCACCTGGTGACT...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAGTATGTGAGCATGCGTaGGCACTGGGTGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAEVCEHA*ALGVAG
Trigger: CCCTGCCACACCCAGTGCCCACGCATGCTCACATAC...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCCCGTGCCATTGCTTaGGCAAAGTTTCCCACTCCT +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRARAIA*AKFPTP
Trigger: AGGAGTGGGAAACTTTGCCCAAGCAATGGCACGGGC...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGGCCCGTGCCATTGCTTaGGCAAAGTTTCCCACTCCT +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAAARAIA*AKFPTP
Trigger: AGGAGTGGGAAACTTTGCCCAAGCAATGGCACGGGC...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGTGGCTTGGACTCACATaGGGTAGCCCCTGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQWLGLT*GSPCLG
Trigger: ACCTAGACAGGGGCTACCCCATGTGAGTCCAAGCCA...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGTGCACCCTGTGGCCATaGGCAGAATGGACCGAGATG +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARCTLWP*AEWTEM
Trigger: CATCTCGGTCCATTCTGCCCATGGCCACAGGGTGCA...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTCTCCGGGGTCCAGCATaGGTCGGGAGTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTALRGPA*VGSGSR
Trigger: CCTGCTCCCACTCCCGACCCATGCTGGACCCCGGAG...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGATGTGATCCTTCGCTaGCTGCTTGGTGATGGTTGG +
Preference number: 4 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPDVILR*LLGDGW
Trigger: CCAACCATCACCAAGCAGTCAGCGAAGGATCACATC...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGAAAGAATCACTCGAATaGGCTGGTTCCGGGGCGACA +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRKESLE*AGSGAT
Trigger: TGTCGCCCCGGAACCAGCTCATTCGAGTGATTCTTT...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGTTAGTTGGAGTGGCCTaGTCAGCTAGCACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: QLSSATAPALPHWWHPGLLVGVA*SASTVR
Trigger: CCTCACCGTGCTAGCTGATCAGGCCACTCCAACTAA...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGGATCCCATTCCAGGTTaGTTGTCTCCAGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAADPIPG*LSPGWA
Trigger: AGCCCAACCTGGAGACAATCAACCTGGAATGGGATC...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGATGTTGGGGAGCACCGTaGCGTTCCATATGGACTGCT +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRCWGAP*RSIWTA
Trigger: AGCAGTCCATATGGAACGTCACGGTGCTCCCCAACA...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGCCGTCTTCATTGAACTaGCCCTCGCCACCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWPSSLN*PSPPSP
Trigger: TGGCGAGGGTGGCGAGGGTCAGTTCAATGAAGACGG...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCATCGTACCCTTGTTACTaGAGGTGGTGGTGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPSYPCY*RWWWLR
Trigger: ACGAAGCCACCACCACCTTCAGTAACAAGGGTACGA...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGCAGGCTCCCTCCAGCTaGGCTCAGCCACGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVQAPSS*AQPRLQ
Trigger: CTGGAGCCGTGGCTGAGCTCAGCTGGAGGGAGCCTG...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAAACCAACAGAAAAGGTaGGCGTGTGCCGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRNQQKR*ACAEAK
Trigger: CTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTT...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGCACCTCAGGGTCCCCTaGTATGTATACACCCCAATG +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRHLRVP*YVYTPM
Trigger: CATTGGGGTGTATACATATCAGGGGACCCTGAGGTG...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCGGTGAGGACGTGTGTTaGGTGGCCACTTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALGEDVC*VATSGP
Trigger: AGGACCAGAAGTGGCCACTCAACACACGTCCTCACC...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCTGTCTCCATTTGGGGTaGCTGGTGAGGACGTGTGTT +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLCLHLG*LVRTCV
Trigger: AACACACGTCCTCACCAGTCACCCCAAATGGAGACA...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCATGTCTCCATTTGGGGTaGCTGGTGAGGACGTGTGTT +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPCLHLG*LVRTCV
Trigger: AACACACGTCCTCACCAGTCACCCCAAATGGAGACA...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAATGTGCCCATGGCAGCTaGTCCATTCCTGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAECAHGS*SIPGDQ
Trigger: CTGATCCCCAGGAATGGATCAGCTGCCATGGGCACA...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGAGCTGGAGTGGACTCTaGCATGGGCTCCATGGAAAA +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQSWSGL*HGLHGK
Trigger: TTTTCCATGGAGCCCATGTCAGAGTCCACTCCAGCT...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACACCCGCCCAGCCTTGGTaGCCAGATGGACCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTPAQPW*PDGPSS
Trigger: AGAGCTTGGTCCATCTGGTCACCAAGGCTGGGCGGG...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCATATTGGACAGGGCCGTaGCAAATTTGTTGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPYWTGP*QICCGR
Trigger: TCGCCCGCAACAAATTTGGCACGGCCCTGTCCAATA...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAGCTTGGTGTTCTTTCTaGAACTCCTCGGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPAWCSF*NSSGGE
Trigger: CTCACCACCCGAGGAGTTGCAGAAAGAACACCAAGC...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGAGATCGTGTGCCGGATaGTGCCCATCTTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARRSCAG*CPSCWR
Trigger: CCTCCAACAAGATGGGCAGCATCCGGCACACGATCT...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTAGATCGTGTGCCGGATaGTGCCCATCTTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQARSCAG*CPSCWR
Trigger: CCTCCAACAAGATGGGCAGCATCCGGCACACGATCT...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGACGACACAGGTGTAGATaGCCTGGTCCTCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRRHRCR*PGPLCG
Trigger: TCCGCAAAGAGGACCAGGGCATCTACACCTGTGTCG...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGCCAGCTGCACCGTGGTaGCCCTTCTGGCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: MVKGGHWSDSARLAYASQPAAPW*PFWPPG
Trigger: ACCAGGTGGCCAGAAGGGGCACCACGGTGCAGCTGG...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACCCAGCTGCACCGTGGTaGCCCTTCTGGCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNPAAPW*PFWPPG
Trigger: ACCAGGTGGCCAGAAGGGGCACCACGGTGCAGCTGG...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGCTTGGTCTAGCTCGGTaGTGGCGACACACGTGTAAC +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARLGLAR*WRHTCN
Trigger: GTTACACGTGTGTCGCCAGCACCGAGCTAGACCAAG...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCTTGGTCTAGCTCGGTaGTGGCGACACACGTGTAAC +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQALGLAR*WRHTCN
Trigger: GTTACACGTGTGTCGCCAGCACCGAGCTAGACCAAG...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp AGCCGCACGCTCCTCTCGGCCAGGTCGGTCAGCTCCAGGTCCCGGGGCCGGTCTTACTTGGAATGGTCATaGCAGACCCCAGGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: SRTLLSARSVSSRSRGRSYLEWS*QTPGWN
Trigger: GTTCCAACCTGGGGTCTGGCATGACCATTCCAAGTA...AGACCGGCCCCGGGACCTGGAGCTGACCGACCTGGCCGAGAGGAGCGTGCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR GCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTAACGCTCGGGGTGGCTaGGAGACCGGGCAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPNARGG*ETGQGA
Trigger: GGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTT...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR GCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCGGGAGCAGTGCCTTATaGCCCAAACACACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLGSSAL*PKHTSK
Trigger: TTTGCTGGTGTGTTTGGGGCATAAGGCACTGCTCCC...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCATGGAAGGGGAGCAGTaGCTTATGCCCCAAACACAC +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLMEGEQ*LMPQTH
Trigger: GTGTGTTTGGGGCATAAGGCACTGCTCCCCTTCCAT...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAATCCTGCCGGAACACTTaGATAGGCTGCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAESCRNT*IGCPAL
Trigger: GAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGA...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAGGCCACTTCTGGTCCTaGCGGAACACTTGCATAGGC +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAEGHFWS*RNTCIG
Trigger: GCCTATGCAAGTGTTCCGGCAGGACCAGAAGTGGCC...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCTATGTGGGCTCAGTTaGACCTTGCAGGGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLLCGLS*TLQGKQ
Trigger: TTGCTTGCCCTGCAAGGTGCAACTGAGCCCACATAG...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTACTGCCCCGGGCCACTaGTTCTCTGGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPTAPGH*FSGCWG
Trigger: TCCCCAGCAGCCAGAGAAGCAGTGGCCCGGGGCAGT...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACCTTGACTGCAGGCACTaGCCTCGGAACTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNLDCRH*PRNCPG
Trigger: CCCGGGGCAGTTCCGAGGGCAGTGCCTGCAGTCAAG...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCTTGACTGCAGGCACTaGCCTCGGAACTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPLDCRH*PRNCPG
Trigger: CCCGGGGCAGTTCCGAGGGCAGTGCCTGCAGTCAAG...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCTGCTTGGTGATGGTTaGCGGCTGCGTCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGALLGDG*RLRQLI
Trigger: AATGAGCTGACGCAGCCGCCAACCATCACCAAGCAG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGGCAGGCGGATCCTATTaGACAGGGCCGTGCCAAATT +
Preference number: 4 (lower is better)
Translates to: QLSSATAPALPHWWHPGLAGGSY*TGPCQI
Trigger: AATTTGGCACGGCCCTGTCCAATAGGATCCGCCTGC...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGAGACACGTTTGTCTTaGGTGATGGGCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPETRLS*VMGSME
Trigger: CTCCATGGAGCCCATCACCCAAGACAAACGTGTCTC...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAACTGCTCGCGGTGCCCTaGGGATACATGAAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAELLAVP*GYMKLG
Trigger: ACCAAGCTTCATGTATCCCCAGGGCACCGCGAGCAG...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGGTACCATGCGATGTCTaGTGTTGGGACCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWVPCDV*CWDPGG
Trigger: GCCTCCGGGGTCCCAACACCAGACATCGCATGGTAC...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGTTTGGGGTTTCCATTaGCTCGACACACCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQVWGFH*LDTPVS
Trigger: GGAGACTGGTGTGTCGAGCCAATGGAAACCCCAAAC...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGACCTCCAGGCGGACTTaGTTTTCAGCTTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARTSRRT*FSALPR
Trigger: CCTGGGCAAAGCTGAAAACCAAGTCCGCCTGGAGGT...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGCGCTGCCGGGGTACTTaGAATGGTCATGCCAGACCC +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWRCRGT*NGHARP
Trigger: GGGTCTGGCATGACCATTCCAAGTACCCCGGCAGCG...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCGATGGGAGGCTGGGGTaGCTGCTCCCAACCTCGTTG +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTDGRLG*LLPTSL
Trigger: CAACGAGGTTGGGAGCAGCCACCCCAGCCTCCCATC...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAGGTAGGTGCGACAGTTaGGATGATGGGGACTGTTGT +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPGRCDS*DDGDCC
Trigger: ACAACAGTCCCCATCATCCCAACTGTCGCACCTACC...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGCTTCTTTTCTCGTACTaGGTACTTGCCGCCGCGACT +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAALLFSY*VLAAAT
Trigger: AGTCGCGGCGGCAAGTACCCAGTACGAGAAAAGAAG...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGTGGTAGGTCTGCAGTaGTTTTGTCTCCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPVVGLQ*FCLPFS
Trigger: GGAGAAGGGGAGACAAAACCACTGCAGACCTACCAC...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGTGGTAGGTCTGCAGTaGTTTTGTCTCCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRVVGLQ*FCLPFS
Trigger: GGAGAAGGGGAGACAAAACCACTGCAGACCTACCAC...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCGGCTTGTGGGTGGCTTaGTGGCTACTGGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALGLWVA*WLLVLT
Trigger: TGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCC...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCGAGGGGGCTTGTGGGTaGCTTGGTGGCTACTGGTCC +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTEGACG*LGGYWS
Trigger: GGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTC...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCAGCTCTCCCACACTaGTGGCACCCGGGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRPALPH*WHPGLK
Trigger: CTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGG...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTCAAGGGCGGACAGTGTaGTGGAACGCTCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTAQGRTV*WNARGG
Trigger: GCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTG...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCTGGGCCCTGGCCACGTaGACAGGTGCCCTCTACTCT +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTWALAT*TGALYS
Trigger: AGAGTAGAGGGCACCTGTCCACGTGGCCAGGGCCCA...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGTGGCAGCATGGGCCCTaGCCACGTGGACAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVWQHGP*PRGQVP
Trigger: GGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCA...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCATCTCCTCGAGGGTaGCAGCATGGGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRPSPRG*QHGPWP
Trigger: TGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGG...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAGGAGATAGACGTTGCTaGAGGCTTCAAGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPGDRRC*RLQGLQ
Trigger: CTGCAAGCCTTGAAGCCTCCAGCAACGTCTATCTCC...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCAGGACGTGTGTTGAGTaGCCACTTCTGGTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALRTCVE*PLLVLP
Trigger: CGGCAGGACCAGAAGTGGCCACTCAACACACGTCCT...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAAGGACGTGTGTTGAGTaGCCACTTCTGGTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAERTCVE*PLLVLP
Trigger: CGGCAGGACCAGAAGTGGCCACTCAACACACGTCCT...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGCCCAGGCCCCCTGGCTaGCAGCCGGAGAGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVPRPPG*QPERLK
Trigger: TTTGAGCCTCTCCGGCTGCCAGCCAGGGGGCCTGGG...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCGTGCAATGGGTACGCTaGCATGTACGGTGCAGTATG +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLVQWVR*HVRCSM
Trigger: CATACTGCACCGTACATGCCAGCGTACCCATTGCAC...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGAGCTTGTCCGTTAGCTaGGAAACCCACACATCCTCG +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRSLSVS*ETHTSS
Trigger: CGAGGATGTGTGGGTTTCCCAGCTAACGGACAAGCT...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCAAGGTGTCATGAGTaGGGAGCGGTGCCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVPRCHE*GAVPCA
Trigger: GGCACAAGGCACCGCTCCCCACTCATGACACCTTGG...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGACTCCATGCTACTCCTTaGCCACCACGCAGAGCTCAA +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRLHATP*PPRRAQ
Trigger: TTGAGCTCTGCGTGGTGGCCAAGGAGTAGCATGGAG...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGTGGCTTGGACTCACATaGGGTAGCCCCTGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: QLSSATAPALPHWWHPGLWLGLT*GSPCLG
Trigger: ACCTAGACAGGGGCTACCCCATGTGAGTCCAAGCCA...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGTTTGGTGGACGCTTGTaGCTCTCCTGGATGGTTCTC +
Preference number: 4 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPFGGRL*LSWMVL
Trigger: GAGAACCATCCAGGAGAGCCACAAGCGTCCACCAAA...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAATTTTGGGAGGCATGTaGGGGATGTGGGAGACGCAG +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRILGGM*GMWETQ
Trigger: CTGCGTCTCCCACATCCCCCACATGCCTCCCAAAAT...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTTGGCCATGGGCAGAATaGACCGAGATGCCCTCACTT +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQAWPWAE*TEMPSL
Trigger: AAGTGAGGGCATCTCGGTCCATTCTGCCCATGGCCA...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCGGGTGGCAGCTTGCATaGGCCCTGCTGCCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LNSSPANPRVAACMGPAAGWQLA*ALLPLC
Trigger: GCAGAGAGGCAGCAGGGCCCATGCAAGCTGCCACCC...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CTGCCCCACCACGTAGCGAGAGCCCCACACTGTGACGTTGTTCCAGGCCTCTCGCGGTACTCTCTGAGCTaGCCCTGGACCGTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: LPHHVARAPHCDVVPGLSRYSLS*PWTVSE
Trigger: CTCCGACACGGTCCAGGGCCAGCTCAGAGAGTACCG...CGAGAGGCCTGGAACAACGTCACAGTGTGGGGCTCTCGCTACGTGGTGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR TCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCGGGGGTCCACGATGTaGTCCTTCGCTGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTRGSTM*SFADCL
Trigger: CAAGCAGTCAGCGAAGGATCACATCGTGGACCCCCG...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGTTGCGGGCGAAGCACTaGTATTCCCCCTCATATTCC +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARLRAKH*YSPSYS
Trigger: GGAATATGAGGGGGAATATCAGTGCTTCGCCCGCAA...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCTCAGCCAGGAGACGGTaGGTTTCAGGGAGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTSARRR*VSGRGR
Trigger: ACGACCCCTCCCTGAAACTCACCGTCTCCTGGCTGA...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGTCATGGGCGTCCACGTaGTCTCCATGTTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQSWAST*SPCCSF
Trigger: GAAAGAACAACATGGAGATCACGTGGACGCCCATGA...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGCTCTCCGCCTCCACTTaGCAATGTAGCGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWLSAST*QCSAGW
Trigger: CCAACCTGCGCTACATTGTCAAGTGGAGGCGGAGAG...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp AGCCGCACGCTCCTCTCGGCCAGGTCGGTCAGCTCCAGGTCCCGGGGCCGGTCTACCGTGAACTTGGTCTaGTTGGGAGAGAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SRTLLSARSVSSRSRGRSTVNLV*LGEKFS
Trigger: GGAAAACTTCTCTCCCAATCAGACCAAGTTCACGGT...AGACCGGCCCCGGGACCTGGAGCTGACCGACCTGGCCGAGAGGAGCGTGCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR TCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAACCGTTCTTTGCACCGTaGACTTGGTCTGATTGGGAG +
Preference number: 4 (lower is better)
Translates to: GQGRTVWWNARGGCETGQPFFAP*TWSDWE
Trigger: CTCCCAATCAGACCAAGTTCACGGTGCAAAGAACGG...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCGTTCTTTGCACCGTaGACTTGGTCTGATTGGGAG +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQAPFFAP*TWSDWE
Trigger: CTCCCAATCAGACCAAGTTCACGGTGCAAAGAACGG...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCCCGTCCAGAGATGTCTaGCTGCCCTGCAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LNSSPANPRVAACMGPAAPSRDV*LPCRGL
Trigger: CAAGCCCCTGCAGGGCAGTCAGACATCTCTGGACGG...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCACTCTCCTGCTGCTTaGTGGTGCCGTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVHSPAA*WCRPEM
Trigger: CATCTCTGGACGGCACCATCAAGCAGCAGGAGAGTG...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAGGCCCAGAGGTGGTTTaGATATTACAGCCTGTCTAC +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPGPEVV*ILQPVY
Trigger: GTAGACAGGCTGTAATATTCAAACCACCTCTGGGCC...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGGCCCAGCTCAGCAACTaGCAAGGCCGAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVAQLSN*QGRGRG
Trigger: CCCTCTGCCTCGGCCTTGTCAGTTGCTGAGCTGGGC...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCAGGGCAGGGGAGGAATaGGGAGCAAGAGGTAAACAC +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALRAGEE*GARGKH
Trigger: GTGTTTACCTCTTGCTCCTCATTCCTCCCCTGCCCT...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCACCAAGACCAGACACCTaGTTTTCTTCTGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPPRPDT*FSSAGG
Trigger: ACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGG...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCATTAGGTGGGGAGGATaGAGGCAGCACCTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALIRWGG*RQHLRS
Trigger: AGACCGAAGGTGCTGCCTTCATCCTCCCCACCTAAT...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATCCACACCGTGGTTCTTaGCTGCTCTGTCCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLVGGLVATGPHSLADPHPHRGS*LLCPAQ
Trigger: CTGGGCGGGACAGAGCAGTCAAGAACCACGGTGTGG...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGAGGCAGCTGTCCCCTaGCCGATGGCAGTGTACTTC +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTEAAVP*PMAVYF
Trigger: GAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTC...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAAGGCAGGAAAAGATaGGTCCCATTCACCATCACC +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLQGRKR*VPFTIT
Trigger: GGTGATGGTGAATGGGACTCATCTTTTCCTGCCTTG...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAACAGGGCGGCGGTGGCTaGCTGGCCATCCTCGGCACC +
Preference number: 4 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQQGGGG*LAILGT
Trigger: GGTGCCGAGGATGGCCAGGCAGCCACCGCCGCCCTG...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCGTGAAAGGGTTCTTCTaGTGGATGGTGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLVKGFF*WMVWVK
Trigger: CTTCACCCACACCATCCAGCAGAAGAACCCTTTCAC...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGCTTGGTGTTCTTTCTaGAACTCCTCGGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRAWCSF*NSSGGE
Trigger: CTCACCACCCGAGGAGTTGCAGAAAGAACACCAAGC...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACGCCCTGGTCCCGCTCTaGCACCCCAAAGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNALVPL*HPKDGQ
Trigger: CTGACCATCTTTGGGGTGGCAGAGCGGGACCAGGGC...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp TGTGACGGCTTCCCCAGAGCCCACCTGCGTCCTGGCGCTGAGGGTAAAGCGGTAGTCTCCAGGTTGGGCTaGCGGACTCGGAAACGCCTA +
Preference number: 4 (lower is better)
Translates to: CDGFPRAHLRPGAEGKAVVSRLG*RTRKRL
Trigger: TAGGCGTTTCCGAGTCCGGCAGCCCAACCTGGAGAC...TACCGCTTTACCCTCAGCGCCAGGACGCAGGTGGGCTCTGGGGAAGCCGTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR GCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGACGTTCCATATGGACTaGTCATCAGGGGCGGATTCG +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARTFHMD*SSGADS
Trigger: CGAATCCGCCCCTGATGAGCAGTCCATATGGAACGT...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGAACGCTCGGGGTGGCTaGGAGACCGGGCAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVNARGG*ETGQGA
Trigger: GGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTT...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGAACGCTCGGGGTGGCTaGGAGACCGGGCAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSENARGG*ETGQGA
Trigger: GGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTT...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGGCATCCTTTGGAAATaGATTGGCCCAGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQGILWK*IGPEVV
Trigger: AACCACCTCTGGGCCAATGCATTTCCAAAGGATGCC...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTATGAAAGGGCAGACCTaGTCAGTCTTGGGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQAMKGQT*SVLGQV
Trigger: GACTTGCCCCAAGACTGAGCAGGTCTGCCCTTTCAT...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGATGAAAGGGCAGACCTaGTCAGTCTTGGGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: QLSSATAPALPHWWHPGLMKGQT*SVLGQV
Trigger: GACTTGCCCCAAGACTGAGCAGGTCTGCCCTTTCAT...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAATTGCATAGGCTGCCCTaGTCTCCTGGAGATAGACGT +
Preference number: 4 (lower is better)
Translates to: GQGRTVWWNARGGCETGQLHRLP*SPGDRR
Trigger: ACGTCTATCTCCAGGAGAGCAGGGCAGCCTATGCAA...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAACACTTGCATAGGCTaGCCTGCTCTCCTGGAGATA +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAANTCIG*PALLEI
Trigger: TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTT...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGATCAAATCGGAGGCTGTaGCCATGGCAGCTGATCCAT +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRSNRRL*PWQLIH
Trigger: ATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGA...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGTTTACCCTGTCCCCTTaGACTGTGATAAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARFTLSP*TVISCP
Trigger: GGGGCAGCTTATCACAGTGCAAGGGGACAGGGTAAA...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGCTCATCGTCCCTTCCTaGCCTAAGGGCCTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWLIVPS*PKGLLS
Trigger: CGAAAGCAGGCCCTTAGGGCAGGAAGGGACGATGAG...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGCCCACTCCTCTAAGGTaGGTTCCTCATCCACACAGA +
Preference number: 4 (lower is better)
Translates to: QLSSATAPALPHWWHPGLPTPLR*VPHPHR
Trigger: TCTGTGTGGATGAGGAACGCACCTTAGAGGAGTGGG...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTACCCGGCCACTTGACTaGAGGCACTGCCCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPTRPLD*RHCPRN
Trigger: GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGT...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCCTCGGGCTCCGGCCCTaGGCGCTGTCCGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGLGLRP*ALSELS
Trigger: GGACAGCTCGGACAGCGCCCAGGGCCGGAGCCCGAG...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp CTGCCCTGGTCCCGCTCTGCCACCCCAAAGATGGTCAGGGAGTCGTCTTCCTTCCAGACCTCCTCCTCATaGACACCCGGGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LPWSRSATPKMVRESSSFQTSSS*TPGGPW
Trigger: CCAAGGACCCCCGGGTGTCCATGAGGAGGAGGTCTG...GAAGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAGAGCGGGACCAGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCGCAGGCGGATCCTATTaGACAGGGCCGTGCCAAATT +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALAGGSY*TGPCQI
Trigger: AATTTGGCACGGCCCTGTCCAATAGGATCCGCCTGC...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTATGGTGTGGGTGAAGTaGAAGCGGGCGTTACAACTG +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQAMVWVK*KRALQL
Trigger: CAGTTGTAACGCCCGCTTCCACTTCACCCACACCAT...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGCTTGGCCTTATCAGATaGGAGGTCCCCACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQLGLIR*EVPTFL
Trigger: AAGAAAGGTGGGGACCTCCCATCTGATAAGGCCAAG...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGTGCTGCCCATCTTGTTaGAGGCCAGGCAGAAATACT +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQCCPSC*RPGRNT
Trigger: AGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCA...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCCATCCACTGGACAGTaGGTTTGGGGTTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAPSTGQ*VWGFHW
Trigger: CCAATGGAAACCCCAAACCCACTGTCCAGTGGATGG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCACCATTCACCATCCACTaGACAGTGGGTTTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPPFTIH*TVGLGF
Trigger: AAACCCCAAACCCACTGTCCAGTGGATGGTGAATGG...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGCCATTCACCATCCACTaGACAGTGGGTTTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAAPFTIH*TVGLGF
Trigger: AAACCCCAAACCCACTGTCCAGTGGATGGTGAATGG...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAACGGTTTGGGTTAGGTaGTGCCGATTGCAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPTVWVR*CRLQRF
Trigger: GAACCTTTGCAATCGGCACCACCTAACCCAAACCGT...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCTTGGAGGTGTTGCACTaGTACACAGCCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALLEVLH*YTALLL
Trigger: CAGCAGCAGGGCTGTGTACCAGTGCAACACCTCCAA...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTACTCCAGCTGCACCGTaGTGCCCCTTCTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPTPAAP*CPFWPP
Trigger: AGGTGGCCAGAAGGGGCACCACGGTGCAGCTGGAGT...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACACTCCAGCTGCACCGTaGTGCCCCTTCTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNTPAAP*CPFWPP
Trigger: AGGTGGCCAGAAGGGGCACCACGGTGCAGCTGGAGT...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATGCCTTGGCCAGGTCTTaGTCTAGCTCGGTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GLVGGLVATGPHSLADPHALARS*SSSVLA
Trigger: CGCCAGCACCGAGCTAGACCAAGACCTGGCCAAGGC...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATGGTCTGGCCGTCCTTTaGGCAGGGCAGCCAAACGGT +
Preference number: 4 (lower is better)
Translates to: GLVGGLVATGPHSLADPHGLAVL*AGQPNG
Trigger: ACCGTTTGGCTGCCCTGCCCAAAGGACGGCCAGACC...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGACCCCAGGTTGGAACTaGTCTTCTTCAAACTGGACG +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRTPGWN*SSSNWT
Trigger: CGTCCAGTTTGAAGAAGACCAGTTCCAACCTGGGGT...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCCATGTTGTTCTTTCTaGTCCCCTCTCCCTTCACGT +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLPCCSF*SPLPSR
Trigger: ACGTGAAGGGAGAGGGGACCAGAAAGAACAACATGG...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGATAGGGCACGTAGACTaGGGTCTGCCCCACCACGTA +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWIGHVD*GLPHHV
Trigger: TACGTGGTGGGGCAGACCCCAGTCTACGTGCCCTAT...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCACCGATGACGGACTCTaGCTCAGGGCCCTTCCCGAA +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTTDDGL*LRALPE
Trigger: TTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATCGGT...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGTAGGTGCGACAGTTaGGATGATGGGGACTGTTGT +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARGRCDS*DDGDCC
Trigger: ACAACAGTCCCCATCATCCCAACTGTCGCACCTACC...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCTTTTTGACCGTGTACTaGCCGATGAAGGAGCCGTCT +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLFLTVY*PMKEPS
Trigger: AGACGGCTCCTTCATCGGCCAGTACACGGTCAAAAA...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTGAGGGGGCTTGTGGGTaGCTTGGTGGCTACTGGTCC +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTAEGACG*LGGYWS
Trigger: GGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTC...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACATTGGGAGGGGGCTTGTaGGTGGCTTGGTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTLGGGL*VAWWLL
Trigger: CAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAA...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCGTGGAACGCTCGGGGTaGCTGCGAGACCGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIVERSG*LRDRAR
Trigger: CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCAC...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCGGGCGGACAGTGTGGTaGAACGCTCGGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTGRTVW*NARGGC
Trigger: GCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCC...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGCAAGGGCGGACAGTGTaGTGGAACGCTCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVQGRTV*WNARGG
Trigger: GCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTG...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCACAGAGACATTGGGTCTaGAGGGGAAGATGCACAAAG +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPQRHWV*RGRCTK
Trigger: CTTTGTGCATCTTCCCCTCCAGACCCAATGTCTCTG...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCACAGAGACATTGGGTCTaGAGGGGAAGATGCACAAAG +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPQRHWV*RGRCTK
Trigger: CTTTGTGCATCTTCCCCTCCAGACCCAATGTCTCTG...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGCCTCTATCTACATCCTaGGTTTCACCAGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQPLSTS*VSPVRR
Trigger: CCTCCTCACTGGTGAAACCCAGGATGTAGATAGAGG...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCAGGACACTGGAACGAGGTGCAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAGAGGTGCCCTCTACTCTaGACAGGGTGGGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: AGHWNEVQRQAAGLLLPKRCPLL*TGWVWP
Trigger: GGGCCACACCCACCCTGTCCAGAGTAGAGGGCACCT...CTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGGCAGCATGGGCCCTaGCCACGTGGACAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPWQHGP*PRGQVP
Trigger: GGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCA...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGAGATAGACGTTGCTaGAGGCTTCAAGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARGDRRC*RLQGLQ
Trigger: CTGCAAGCCTTGAAGCCTCCAGCAACGTCTATCTCC...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAACAGCTGATCCATTCCTaGGGATCAGCTTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAEQLIHS*GSASPS
Trigger: GGAGGGTGAAGCTGATCCCCAGGAATGGATCAGCTG...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCCCCAGGCCCCCTGGCTaGCAGCCGGAGAGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIPRPPG*QPERLK
Trigger: TTTGAGCCTCTCCGGCTGCCAGCCAGGGGGCCTGGG...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTTTCCCAGTCACCAGGTaGTGTGGCAGACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAFPVTR*CGRLAH
Trigger: ATGAGCAAGTCTGCCACACCACCTGGTGACTGGGAA...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGAGTGGACTCTGACATaGGCTCCATGGAAAATGCAC +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPEWTLT*APWKMH
Trigger: GTGCATTTTCCATGGAGCCCATGTCAGAGTCCACTC...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCAGCCAGACAGACTaGAGCGCCGATGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRPSQTD*SADGMV
Trigger: CACCATGCCATCGGCGCTCCAGTCTGTCTGGCTGGG...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTCAGGGGCAGGGGCAATaGGGTGGACCAGATGTCTCC +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTAQGQGQ*GGPDVS
Trigger: GGAGACATCTGGTCCACCCCATTGCCCCTGCCCCTG...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GCAGGACACTGGAACGAGGTGCAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAGCGTGGGCACTGGGTGTaGCAGGGGAGCTTGTCCGTT +
Preference number: 4 (lower is better)
Translates to: AGHWNEVQRQAAGLLLPKRGHWV*QGSLSV
Trigger: AACGGACAAGCTCCCCTGCCACACCCAGTGCCCACG...CTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGCTTGGAAGCACTGCTTaGCAACAGGGTTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: QLSSATAPALPHWWHPGLLGSTA*QQGCGL
Trigger: CAGACCACAACCCTGTTGCCAAGCAGTGCTTCCAAG...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGTGGATCGCTATCCCTTaGAAGCACTGCTTGGCAACA +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRWIAIP*KHCLAT
Trigger: TGTTGCCAAGCAGTGCTTCCAAGGGATAGCGATCCA...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGTGGATCGCTATCCCTTaGAAGCACTGCTTGGCAACA +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQWIAIP*KHCLAT
Trigger: TGTTGCCAAGCAGTGCTTCCAAGGGATAGCGATCCA...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTTGCCTCCCAGGGCCTTaGTCTCCTCTTGACATATCA +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQACLPGP*SPLDIS
Trigger: TGATATGTCAAGAGGAGACCAAGGCCCTGGGAGGCA...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGACAGCCACAAAGTCTaGCTTGGACTCACATGGGGT +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARDSHKV*LGLTWG
Trigger: ACCCCATGTGAGTCCAAGCCAGACTTTGTGGCTGTC...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCACACTTCCCTGGGCTTaGGCTGTGCAGGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LNSSPANPRVAACMGPAATLPWA*AVQAGD
Trigger: GTCCCCAGCCTGCACAGCCCAAGCCCAGGGAAGTGT...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCATGTCCGCTTGGTTGTTaGTGTAAGCTTCATTCGGGG +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPCPLGC*CKLHSG
Trigger: CCCCGAATGAAGCTTACACCAACAACCAAGCGGACA...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGCAGCCCTGCCCTGGGTaGAATCAAAATAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAAQPCPG*NQNNSW
Trigger: CCAGGAATTATTTTGATTCCACCCAGGGCAGGGCTG...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404076.5
CDS-3UTR TCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACTCGCTGACTGCTTGGTaGTGGTTGGCGGCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNSLTAW*WLAAAS
Trigger: TGACGCAGCCGCCAACCATCACCAAGCAGTCAGCGA...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAATCTCCGTTATGGCCCTaGGAGACACGTTTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAESPLWP*ETRLSW
Trigger: CCAAGACAAACGTGTCTCTCAGGGCCATAACGGAGA...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTGCTGGATGGTGTGGGTaGAGTGGAAGCGGGCGTTAC +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPAGWCG*SGSGRY
Trigger: GTAACGCCCGCTTCCACTTCACCCACACCATCCAGC...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTTGCCCTGGGGATACATaGAGCTTGGTGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGACPGDT*SLVFFL
Trigger: CAGAAAGAACACCAAGCTTCATGTATCCCCAGGGCA...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAAAAGAATCACTCGAATaGGCTGGTTCCGGGGCGACA +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAEKESLE*AGSGAT
Trigger: TGTCGCCCCGGAACCAGCTCATTCGAGTGATTCTTT...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACTCCTGGTGGGGTCTTTaGCCTCCAGGCGGACTTGGT +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNSWWGL*PPGGLG
Trigger: ACCAAGTCCGCCTGGAGGTCAAAGACCCCACCAGGA...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTTCCTGGTGGGGTCTTTaGCCTCCAGGCGGACTTGGT +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPSWWGL*PPGGLG
Trigger: ACCAAGTCCGCCTGGAGGTCAAAGACCCCACCAGGA...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp CTGCCCTGGTCCCGCTCTGCCACCCCAAAGATGGTCAGGGAGTCGTCTTCCTTCGATCAGCTAGCACGGTaGGGTAGGCCTTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LPWSRSATPKMVRESSSFDQLAR*GRPWPG
Trigger: ACCTGGCCAAGGCCTACCTCACCGTGCTAGCTGATC...GAAGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAGAGCGGGACCAGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR TCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTGAGAGCCCCACACTGTaGCGTTGTTCCAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTAESPTL*RCSRPL
Trigger: GAGAGGCCTGGAACAACGTCACAGTGTGGGGCTCTC...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCGATCCCATTCCAGGTTaGTTGTCTCCAGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALDPIPG*LSPGWA
Trigger: AGCCCAACCTGGAGACAATCAACCTGGAATGGGATC...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCGGTAAAGCGGTAGCGTaGCACGGGGTCCGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTGKAVA*HGVRSL
Trigger: CAAAGAACGGACCCCGTGTCACGCTACCGCTTTACC...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGCTGGTGACTCCTCTGTaGCGGCTTCCCCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVLVTPL*RLPQSP
Trigger: TGGGCTCTGGGGAAGCCGTCACAGAGGAGTCACCAG...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGCCGTCCAGAGATGTCTaGCTGCCCTGCAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVPSRDV*LPCRGL
Trigger: CAAGCCCCTGCAGGGCAGTCAGACATCTCTGGACGG...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGAACCAACAGAAAAGGTaGGCGTGTGCCGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVNQQKR*ACAEAK
Trigger: CTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTT...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGGCCCAGAGGTGGTTTaGATATTACAGCCTGTCTAC +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRGPEVV*ILQPVY
Trigger: GTAGACAGGCTGTAATATTCAAACCACCTCTGGGCC...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCCACCTCAGGGTCCCCTaGTATGTATACACCCCAATG +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALHLRVP*YVYTPM
Trigger: CATTGGGGTGTATACATATCAGGGGACCCTGAGGTG...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGAGGACGTGTGTTaGGTGGCCACTTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTGEDVC*VATSGP
Trigger: AGGACCAGAAGTGGCCACTCAACACACGTCCTCACC...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCTGTCTCCATTTGGGGTaGCTGGTGAGGACGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALCLHLG*LVRTCV
Trigger: AACACACGTCCTCACCAGTCACCCCAAATGGAGACA...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GCAGGACACTGGAACGAGGTGCAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAGGCAGCACCTTCGGTCTaGGAACTGCAGGTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: AGHWNEVQRQAAGLLLPKAAPSV*ELQVCE
Trigger: CTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGC...CTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGCACACTTCCCTaGCATTCCCTTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWTGTLP*HSLQGQ
Trigger: CTGTCCCTGAAGGGAATGTCAGGGAAGTGTGCCTGT...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGAGTGTCTGAGAAACTaGCTACTCTGCTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQECLRN*LLCSDP
Trigger: TGGATCTGAGCAGAGTAGTCAGTTTCTCAGACACTC...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGTCTGCTGTATGTATGTaGGCATGCGTGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWSAVCM*ACVGTG
Trigger: CCCAGTGCCCACGCATGCTCACATACATACAGCAGA...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGCAGCTGTGGTGAGATaGAAGAACACTGACTGGACA +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARAAVVR*KNTDWT
Trigger: TGTCCAGTCAGTGTTCTTTCATCTCACCACAGCTGC...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAATTGCATGACTGGGTaGACCACACACAGGCTGATC +
Preference number: 4 (lower is better)
Translates to: QLSSATAPALPHWWHPGLNCMTG*TTHRLI
Trigger: GATCAGCCTGTGTGTGGTTCACCCAGTCATGCAATT...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CAAGGTGGGAGGCAGCTGTCCCCTGACCGATGGCAGTGTACTTCCCGAACCCTGCACGTCACAGGCGACTaGTGCTCAGCTCAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: QGGRQLSPDRWQCTSRTLHVTGD*CSAQGE
Trigger: CTCCCCTTGAGCTGAGCATCAGTCGCCTGTGACGTG...CAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTCCCACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTAGAGATCACCACGCCTaGCCCGGCCACTTGACTGCA +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPRDHHA*PGHLTA
Trigger: TGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCT...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAGCTTGCTGTCTCTTCTaGGACACCCACAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAEACCLF*DTHRFF
Trigger: GAAGAACCTGTGGGTGTCTCAGAAGAGACAGCAAGC...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp CGCTCTGCCACCCCAAAGATGGTCAGGGAGTCGTCTTCCTTCTTCATCCTGTTTCAGGGCGGCGGTGGCTaGCTGGCCATCCTCGGCACC +
Preference number: 4 (lower is better)
Translates to: RSATPKMVRESSSFFILFQGGGG*LAILGT
Trigger: GGTGCCGAGGATGGCCAGGCAGCCACCGCCGCCCTG...AAACAGGATGAAGAAGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR GCA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCCAGGGCGGCGGTGGCTaGCTGGCCATCCTCGGCACC +
Preference number: 4 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTQGGGG*LAILGT
Trigger: GGTGCCGAGGATGGCCAGGCAGCCACCGCCGCCCTG...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGGCAGGGTTCCCTTTTaGTTCACACTCAATCAGGAT +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQGRVPF*FTLNQD
Trigger: ATCCTGATTGAGTGTGAAGCAAAAGGGAACCCTGCC...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGGCAGGGTTCCCTTTTaGTTCACACTCAATCAGGAT +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRGRVPF*FTLNQD
Trigger: ATCCTGATTGAGTGTGAAGCAAAAGGGAACCCTGCC...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGCCGGCCGCCCGCCACTaGGGAAGTCAATCACCAGGG +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEEPAARH*GSQSPG
Trigger: CCCTGGTGATTGACTTCCGCAGTGGCGGGCGGCCGG...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGCCGGCCGCCCGCCACTaGGGAAGTCAATCACCAGGG +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVPAARH*GSQSPG
Trigger: CCCTGGTGATTGACTTCCGCAGTGGCGGGCGGCCGG...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCAGCAGGAGGTCCATaGCACGAAGCACCATCTGGC +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRPAGGP*HEAPSG
Trigger: GCCAGATGGTGCTTCGTGGCATGGACCTCCTGCTGG...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACCCAGCAGGAGGTCCATaGCACGAAGCACCATCTGGC +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNPAGGP*HEAPSG
Trigger: GCCAGATGGTGCTTCGTGGCATGGACCTCCTGCTGG...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGACCTTTCTTGTACCATaGGATGTCTGGTGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPTFLVP*DVWCWD
Trigger: GTCCCAACACCAGACATCGCATGGTACAAGAAAGGT...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACACTCACCGAGATCGTGTaGCGGATGCTGCCCATCTTG +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTLTEIV*RMLPIL
Trigger: CAAGATGGGCAGCATCCGGCACACGATCTCGGTGAG...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCATCCAGGTTGCTTCCTTaGCCATTCTTAAACCATCGC +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPSRLLP*PFLNHR
Trigger: GCGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGA...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCTTGGTTTTCAGCTTTaGCCAGGATGTTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQALGFQL*PGCWWR
Trigger: TCGCCACCAACATCCTGGGCAAAGCTGAAAACCAAG...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGACCCGACACTCCAGCTaGACCGTGGTGCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVTRHSS*TVVPLL
Trigger: CAGAAGGGGCACCACGGTGCAGCTGGAGTGTCGGGT...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACGACACACGTGTAACTaGCCTGGTCCCGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRRHTCN*PGPALP
Trigger: TGGCAGAGCGGGACCAGGGCAGTTACACGTGTGTCG...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCGGGCCCGAAATTGTaGTTCCAGGTGATGTTGGCC +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTPGPKL*FQVMLA
Trigger: GGCCAACATCACCTGGAAGCACAATTTCGGGCCCGG...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGCACCAGCAAAGCTTTTaGATCACAGGGTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRHQQSF*ITGFHL
Trigger: GAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGCACCAGCAAAGCTTTTaGATCACAGGGTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPHQQSF*ITGFHL
Trigger: GAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAGGGAGCAGTGCCTTATaGCCCAAACACACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAEGSSAL*PKHTSK
Trigger: TTTGCTGGTGTGTTTGGGGCATAAGGCACTGCTCCC...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCATGAAAGGGCAGACCTaGTCAGTCTTGGGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALMKGQT*SVLGQV
Trigger: GACTTGCCCCAAGACTGAGCAGGTCTGCCCTTTCAT...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGACAGATCAGCGCTaGATAAGGCATACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: GQGRTVWWNARGGCETGQGTDQR*IRHTKS
Trigger: GCTCTTTGTATGCCTTATGCAGCGCTGATCTGTCCC...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGAACACTTGCATAGGCTaGCCTGCTCTCCTGGAGATA +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARNTCIG*PALLEI
Trigger: TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTT...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCTCCTGCCGGAACACTTaGATAGGCTGCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTSCRNT*IGCPAL
Trigger: GAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGA...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCGGCCACTTCTGGTCCTaGCGGAACACTTGCATAGGC +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTGHFWS*RNTCIG
Trigger: GCCTATGCAAGTGTTCCGGCAGGACCAGAAGTGGCC...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGTGGTGTGGCAGACTTaGTCATCGTCCCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTVVWQT*SSSLPA
Trigger: GGCAGGAAGGGACGATGAGCAAGTCTGCCACACCAC...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAACTTCAGCCTCAGATTTaGTTCTGCTCAGAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: GQGRTVWWNARGGCETGQLQPQI*FCSEGC
Trigger: ACACCCCTCTGAGCAGAAGCAAATCTGAGGCTGAAG...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGATCTCTCTGACCACCTaGCTTCCTTGCTTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: QLSSATAPALPHWWHPGLISLTT*LPCLGK
Trigger: TTTCCCCAAGCAAGGAAGGCAGGTGGTCAGAGAGAT...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGATGTCTTGGGGTAGTTaGTTGGGAGACCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWMSWGS*LGDPAG
Trigger: GCCAGCTGGGTCTCCCAAGCAACTACCCCAAGACAT...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGAGCACAAAGGAGGGTaGTGGTTTGGCTTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRAREHKGG*WFGFPV
Trigger: AACAGGAAAGCCAAACCAGCACCCTCCTTTGTGCTC...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAAATGTGCTATGTCCCTaGTCCCTCCATCAAATGGGC +
Preference number: 4 (lower is better)
Translates to: GQGRTVWWNARGGCETGQNVLCP*SLHQMG
Trigger: GCCCATTTGATGGAGGGAGCAGGGACATAGCACATT...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGGGAGCGGTGCCTTGTaGCGGCCTCCCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIGSGAL*RPPRNL
Trigger: CAGGTTCCTGGGAGGCCGGCACAAGGCACCGCTCCC...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGCTTGGTGTTCTTTCTaGAACTCCTCGGGCACTGTA +
Preference number: 4 (lower is better)
Translates to: GQGRTVWWNARGGCETGQAWCSF*NSSGTV
Trigger: TACAGTGCCCGAGGAGTTGCAGAAAGAACACCAAGC...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGGCGGCGGTGGCTGCCTaGCCATCCTCGGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKAAVAA*PSSAPG
Trigger: GCCAGGTGCCGAGGATGGCCAGGCAGCCACCGCCGC...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGAGGAGGAAGGCTGCATaGACCCAGGGCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEERRKAA*TQGGGG
Trigger: GCCACCGCCGCCCTGGGTCCATGCAGCCTTCCTCCT...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCGAGACACGTTTGTCTTaGGTGATGGGCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALETRLS*VMGSME
Trigger: CTCCATGGAGCCCATCACCCAAGACAAACGTGTCTC...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAACCTGCAGCATCACGTTaGAGAAGTATAGGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: GQGRTVWWNARGGCETGQPAASR*RSIGLR
Trigger: ACGGAGACCTATACTTCTCCAACGTGATGCTGCAGG...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAATGGTGTGGGTGAAGTaGAAGCGGGCGTTACAACTG +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAEMVWVK*KRALQL
Trigger: CAGTTGTAACGCCCGCTTCCACTTCACCCACACCAT...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACGTACCATGCGATGTCTaGTGTTGGGACCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNVPCDV*CWDPGG
Trigger: GCCTCCGGGGTCCCAACACCAGACATCGCATGGTAC...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCGGTAGCCATGCTCGTTaGAGGTGTTGCACTGGTACA +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALGSHAR*RCCTGT
Trigger: TGTACCAGTGCAACACCTCCAACGAGCATGGCTACC...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACCTCCAGGCGGACTTaGTTTTCAGCTTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWTSRRT*FSALPR
Trigger: CCTGGGCAAAGCTGAAAACCAAGTCCGCCTGGAGGT...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGCCGTGGTGCCCCTTCTaGCCACCTGGTCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEEPWCPF*PPGPRA
Trigger: TGCCCGAGGACCAGGTGGCCAGAAGGGGCACCACGG...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGGATGGGAGGCTGGGGTaGCTGCTCCCAACCTCGTTG +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVDGRLG*LLPTSL
Trigger: CAACGAGGTTGGGAGCAGCCACCCCAGCCTCCCATC...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGCCATGTTGTTCTTTCTaGTCCCCTCTCCCTTCACGT +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARPCCSF*SPLPSR
Trigger: ACGTGAAGGGAGAGGGGACCAGAAAGAACAACATGG...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAATAGGGCACGTAGACTaGGGTCTGCCCCACCACGTA +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTIGHVD*GLPHHV
Trigger: TACGTGGTGGGGCAGACCCCAGTCTACGTGCCCTAT...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTCCAATGAACCAGCCCTaGGTGGCGATGTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTAPMNQP*VAMSAW
Trigger: CCAAGCGGACATCGCCACCCAGGGCTGGTTCATTGG...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAACTTCTTTTCTCGTACTaGGTACTTGCCGCCGCGACT +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAELLFSY*VLAAAT
Trigger: AGTCGCGGCGGCAAGTACCCAGTACGAGAAAAGAAG...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGGTGGCTGTGCCTGGGTaGGCTCCGTTAGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVVAVPG*APLGQR
Trigger: TCTCTGGCCTAACGGAGCCCACCCAGGCACAGCCAC...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGTTGTGGGTGGCTTGGTaGCTACTGGTCCTCACAGCT +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWLWVAW*LLVLTA
Trigger: AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAA...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCGGCTTGTGGGTGGCTTaGTGGCTACTGGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTGLWVA*WLLVLT
Trigger: TGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCC...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGAGCTCTCCCACACTGGTaGCACCCGGGGCTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRALPHW*HPGLKG
Trigger: CCCCTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGC...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGCTCTCCCACACTGGTaGCACCCGGGGCTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLALPHW*HPGLKG
Trigger: CCCCTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGC...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCCCAGCTCTCCCACACTaGTGGCACCCGGGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTPALPH*WHPGLK
Trigger: CTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGG...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTGGAACGCTCGGGGTaGCTGCGAGACCGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLVERSG*LRDRAR
Trigger: CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCAC...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGAGAAAACAGAGACATTaGGTCTGGAGGGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRRKQRH*VWRGRC
Trigger: GCATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCT...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAGCATTGGCCCAGAGGTaGTTTGAATATTACAGCCTG +
Preference number: 4 (lower is better)
Translates to: WWNARGGCETGQGARLPPALAQR*FEYYSL
Trigger: CAGGCTGTAATATTCAAACCACCTCTGGGCCAATGC...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCATTGGCCCAGAGGTaGTTTGAATATTACAGCCTG +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQALAQR*FEYYSL
Trigger: CAGGCTGTAATATTCAAACCACCTCTGGGCCAATGC...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGAGAAAGGCATCCTTTaGAAATGCATTGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDREKGIL*KCIGPE
Trigger: CTCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTC...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGAGAAAGGCATCCTTTaGAAATGCATTGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPEKGIL*KCIGPE
Trigger: CTCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTC...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCACTGATTTTCTTCTGCTaGAGGTACACAGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPLIFFC*RYTVTG
Trigger: GCCAGTGACTGTGTACCTCCAGCAGAAGAAAATCAG...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGCCTCTATCTACATCCTaGGTTTCACCAGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARPLSTS*VSPVRR
Trigger: CCTCCTCACTGGTGAAACCCAGGATGTAGATAGAGG...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCCTCTATCTACATCCTaGGTTTCACCAGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAPLSTS*VSPVRR
Trigger: CCTCCTCACTGGTGAAACCCAGGATGTAGATAGAGG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGAGACCTGCTCAGTCTTaGGGCAAGTCCCCATCCACA +
Preference number: 4 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVRPAQS*GKSPST
Trigger: TGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCT...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CAAGGTGGGAGGCAGCTGTCCCCTGACCGATGGCAGTGTACTTCCCGAACCCTGCGGAGGCTGTGCCCATaGCAGCTGATCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: QGGRQLSPDRWQCTSRTLRRLCP*QLIHSW
Trigger: CCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCG...CAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTCCCACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAGGCATGGTGCTGTCCTaGCTTCACTGTTGGTATGTC +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAEGMVLS*LHCWYV
Trigger: GACATACCAACAGTGAAGCCAGGACAGCACCATGCC...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCATGCTCCCAGCTCAATaGCCACTGTGTCCTAGCACT +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALMLPAQ*PLCPST
Trigger: AGTGCTAGGACACAGTGGCCATTGAGCTGGGAGCAT...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAATCTCAAGCCACACCGTaGTTCTTGACTGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAESQATP*FLTALS
Trigger: GGACAGAGCAGTCAAGAACCACGGTGTGGCTTGAGA...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGCTCCCTCCATCAAATaGGCTGTTTGTGATGCCCTA +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAAPSIK*AVCDAL
Trigger: TAGGGCATCACAAACAGCCCATTTGATGGAGGGAGC...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTGCTCCCTCCATCAAATaGGCTGTTTGTGATGCCCTA +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQAAPSIK*AVCDAL
Trigger: TAGGGCATCACAAACAGCCCATTTGATGGAGGGAGC...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGAAAGGACACTTCCCTaGGCTTGGGCTGTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTERTLP*AWAVQA
Trigger: AGCCTGCACAGCCCAAGCCCAGGGAAGTGTCCTTTC...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGGAGCAGGACAGAAGGTaGCCACGTCACAGGCGACTG +
Preference number: 4 (lower is better)
Translates to: MVKGGHWSDSARLAYASQEQDRR*PRHRRL
Trigger: CAGTCGCCTGTGACGTGGCCACCTTCTGTCCTGCTC...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp AGCCGCACGCTCCTCTCGGCCAGGTCGGTCAGCTCCAGGTCCCGGGGCCGGTCTCTGTACATGTCAGGGTaGTTTCTTAAGGACGAGTCA +
Preference number: 4 (lower is better)
Translates to: SRTLLSARSVSSRSRGRSLYMSG*FLKDES
Trigger: TGACTCGTCCTTAAGAAACCACCCTGACATGTACAG...AGACCGGCCCCGGGACCTGGAGCTGACCGACCTGGCCGAGAGGAGCGTGCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR CAA 72 bp GTGAGCATGCGTGGGCACTGGGTGTGGCAGGGGAGCTaGTCCGTTAGCTGGGAAACCCACACATCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: VSMRGHWVWQGS*SVSWETHTSSG
Trigger: ACCCGAGGATGTGTGGGTTTCCCAGCTAACGGACAAGCTCCCCTGCCACACCCAGTGCCCACGCATGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
CDS-3UTR TCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCTGCTCATCCAGAAGATaGCCGGGGATGGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTCSSRR*PGMEVQ
Trigger: CTGGACTTCCATCCCCGGTCATCTTCTGGATGAGCA...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATCACGTTTGTCTTGGGTaGTGGGCTCCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLVGGLVATGPHSLADPHHVCLG*WAPWSC
Trigger: GCAGCTCCATGGAGCCCATCACCCAAGACAAACGTG...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCGGGTGTCCCGGAAGATaGTGGTGTCTCCGGCCACCT +
Preference number: 4 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTGCPGR*WCLRPP
Trigger: AGGTGGCCGGAGACACCATCATCTTCCGGGACACCC...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTGCACATCCAGCACACTaGCAAAGGCGTTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPAHPAH*QRRWPA
Trigger: TGCTGGCCAACGCCTTTGTCAGTGTGCTGGATGTGC...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGAAAGAATCACTCGAATaGGCTGGTTCCGGGGCGACA +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWKESLE*AGSGAT
Trigger: TGTCGCCCCGGAACCAGCTCATTCGAGTGATTCTTT...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCAGCCAGGAGACGGTaGGTTTCAGGGAGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVSARRR*VSGRGR
Trigger: ACGACCCCTCCCTGAAACTCACCGTCTCCTGGCTGA...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGTCAGCCAGGAGACGGTaGGTTTCAGGGAGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVSARRR*VSGRGR
Trigger: ACGACCCCTCCCTGAAACTCACCGTCTCCTGGCTGA...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGTTTGGATGCTCAGGATaGTCCCATTCCAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRFGCSG*SHSRLI
Trigger: AATCAACCTGGAATGGGATCATCCTGAGCATCCAAA...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGAGTGTATCCAATCATaGTCCCATTTGGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQECIQS*SHLDAQ
Trigger: CTGAGCATCCAAATGGGATCATGATTGGATACACTC...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTACCGTGAACTTGGTCTaGTTGGGAGAGAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQATVNLV*LGEKFS
Trigger: GGAAAACTTCTCTCCCAATCAGACCAAGTTCACGGT...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCCTGGTGACTCCTCTGTaGCGGCTTCCCCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ERLKSEAVPMAADPFLGILVTPL*RLPQSP
Trigger: TGGGCTCTGGGGAAGCCGTCACAGAGGAGTCACCAG...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAATCACTATAGTCAAATaGGCCATCCTCTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPITIVK*AILFLG
Trigger: CCCAAGGAAGAGGATGGCTCATTTGACTATAGTGAT...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGCCGTCTTCATTGAACTaGCCCTCGCCACCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVPSSLN*PSPPSP
Trigger: TGGCGAGGGTGGCGAGGGTCAGTTCAATGAAGACGG...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGCCCAGCTCAGCAACTaGCAAGGCCGAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLAQLSN*QGRGRG
Trigger: CCCTCTGCCTCGGCCTTGTCAGTTGCTGAGCTGGGC...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCACCTCAGGGTCCCCTaGTATGTATACACCCCAATG +
Preference number: 4 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVHLRVP*YVYTPM
Trigger: CATTGGGGTGTATACATATCAGGGGACCCTGAGGTG...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGGGGCATCACAACACTaGGTACGGTGCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVGASQH*VRCHLR
Trigger: CCTGAGGTGGCACCGTACTCAGTGTTGTGATGCCCC...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAATTTGGGGTGACTGGTaGGGACGTGTGTTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTIWGDW*GRVLSG
Trigger: GCCACTCAACACACGTCCTCACCAGTCACCCCAAAT...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCATTTGGGGTGACTGGTaGGGACGTGTGTTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTIWGDW*GRVLSG
Trigger: GCCACTCAACACACGTCCTCACCAGTCACCCCAAAT...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCATTAGGTGGGGAGGATaGAGGCAGCACCTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTIRWGG*RQHLRS
Trigger: AGACCGAAGGTGCTGCCTTCATCCTCCCCACCTAAT...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGATGTGCCCATGGCAGCTaGTCCATTCCTGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRCAHGS*SIPGDQ
Trigger: CTGATCCCCAGGAATGGATCAGCTGCCATGGGCACA...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGAGCTGGAGTGGACTCTaGCATGGGCTCCATGGAAAA +
Preference number: 4 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVSWSGL*HGLHGK
Trigger: TTTTCCATGGAGCCCATGTCAGAGTCCACTCCAGCT...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAGAACCTGCTGGCCACTaGGAAGGGATTCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGREPAGH*EGILWH
Trigger: GTGCCAGAGAATCCCTTCTCAGTGGCCAGCAGGTTC...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGGGAGGGCACTGGTCTaGCTCTGCCCGGCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEGRALV*LCPACL
Trigger: TAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCC...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGCTGAAGGTCGTGTGTaGCACCCTCAGATACGCATC +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTAEGRV*HPQIRI
Trigger: GATGCGTATCTGAGGGTGTCACACACGACCTTCAGC...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATGGCTCTGTTCCAGGCTaGGGAGGGAAGGTAAACTCC +
Preference number: 4 (lower is better)
Translates to: GLVGGLVATGPHSLADPHGSVPG*GGKVNS
Trigger: GGAGTTTACCTTCCCTCCGCAGCCTGGAACAGAGCC...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCGCAGAGGAGGAAGGCTaGATGGACCCAGGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGAEEEG*MDPGRR
Trigger: CCGCCGCCCTGGGTCCATGCAGCCTTCCTCCTCTGC...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGGCTTGGTGTTCTTTCTaGAACTCCTCGGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWAWCSF*NSSGGE
Trigger: CTCACCACCCGAGGAGTTGCAGAAAGAACACCAAGC...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTTCGTGTGCCGGATGCTaGCCATCTTGTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPSCAGC*PSCWRP
Trigger: TGGCCTCCAACAAGATGGGCAGCATCCGGCACACGA...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp GCAGGACACTGGAACGAGGTGCAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAGCTCACCGAGATCGTGTaGCGGATGCTGCCCATCTTG +
Preference number: 4 (lower is better)
Translates to: AGHWNEVQRQAAGLLLPKLTEIV*RMLPIL
Trigger: CAAGATGGGCAGCATCCGGCACACGATCTCGGTGAG...CTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCTCACCGAGATCGTGTaGCGGATGCTGCCCATCTTG +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPLTEIV*RMLPIL
Trigger: CAAGATGGGCAGCATCCGGCACACGATCTCGGTGAG...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACGCTCGTTGGAGGTGTTaGACTGGTACACAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNARWRC*TGTQPC
Trigger: GCAGGGCTGTGTACCAGTGCAACACCTCCAACGAGC...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTGCTCGTTGGAGGTGTTaGACTGGTACACAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTAARWRC*TGTQPC
Trigger: GCAGGGCTGTGTACCAGTGCAACACCTCCAACGAGC...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGCCAGCTGCACCGTGGTaGCCCTTCTGGCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVPAAPW*PFWPPG
Trigger: ACCAGGTGGCCAGAAGGGGCACCACGGTGCAGCTGG...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGTCCCCAGAGCCCACCTaGGTCCTGGCGCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVSPEPT*VLALRV
Trigger: TACCCTCAGCGCCAGGACGCAGGTGGGCTCTGGGGA...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR GCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAGGCATCCTTTGGAAATaGATTGGCCCAGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAEGILWK*IGPEVV
Trigger: AACCACCTCTGGGCCAATGCATTTCCAAAGGATGCC...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGAGCAGCAAGGAGGCCTaGGCACCTTCTCCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVSSKEA*APSPCQ
Trigger: TTGGCAGGGAGAAGGTGCGCAGGCCTCCTTGCTGCT...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACGGCCACGTGGACAGGTaGCCTCTACTCTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHGHVDR*PLLWTG
Trigger: CCCTGTCCAGAGTAGAGGGCACCTGTCCACGTGGCC...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR GCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGTCAAATCGGAGGCTGTaGCCATGGCAGCTGATCCAT +
Preference number: 4 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVSNRRL*PWQLIH
Trigger: ATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGA...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGTGCACTGTGATAAGCTaGCCCTCAGGCGTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: MVKGGHWSDSARLAYASQCTVIS*PSGVQA
Trigger: TGCCTGGACGCCTGAGGGGCAGCTTATCACAGTGCA...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTAGGGCCTGCTTTCGGTaGAATGGGTACGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTARACFR*NGYAGM
Trigger: CATGCCAGCGTACCCATTGCACCGAAAGCAGGCCCT...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGGCATATAGGTGGGATTaGAGCCTAGTCAAAGGAACT +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAAAYRWD*SLVKGT
Trigger: AGTTCCTTTGACTAGGCTGCAATCCCACCTATATGC...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGCTCAGTTGCACCTTaGAGGGCAAGCAATGTTGGC +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTGSVAP*RASNVG
Trigger: GCCAACATTGCTTGCCCTGCAAGGTGCAACTGAGCC...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGCCACACAGAGCCCTTTaGATCTTATCTCACGCAACT +
Preference number: 4 (lower is better)
Translates to: QLSSATAPALPHWWHPGLPHRAL*ILSHAT
Trigger: AGTTGCGTGAGATAAGATGCAAAGGGCTCTGTGTGG...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGGGCCTCCCAGGAACCTaGTGGCCACTGAGAAGGGAT +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVGLPGT*WPLRRD
Trigger: ATCCCTTCTCAGTGGCCAGCAGGTTCCTGGGAGGCC...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGCTCGGGCTCCGGCCCTaGGCGCTGTCCGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKLGLRP*ALSELS
Trigger: GGACAGCTCGGACAGCGCCCAGGGCCGGAGCCCGAG...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGGCGGCGGTGGCTGCCTaGCCATCCTCGGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQAAVAA*PSSAPG
Trigger: GCCAGGTGCCGAGGATGGCCAGGCAGCCACCGCCGC...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGGCGGCGGTGGCTGCCTaGCCATCCTCGGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWAAVAA*PSSAPG
Trigger: GCCAGGTGCCGAGGATGGCCAGGCAGCCACCGCCGC...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAGGAGGAAGGCTGCATaGACCCAGGGCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGRRKAA*TQGGGG
Trigger: GCCACCGCCGCCCTGGGTCCATGCAGCCTTCCTCCT...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCAGGAGGAAGGCTGCATaGACCCAGGGCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRRRKAA*TQGGGG
Trigger: GCCACCGCCGCCCTGGGTCCATGCAGCCTTCCTCCT...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAGTGTCCAGTGGAAGCTaGGGGCAGGGTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRVSSGS*GQGSLL
Trigger: CAAAAGGGAACCCTGCCCCCAGCTTCCACTGGACAC...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTGTGTCCAGTGGAAGCTaGGGGCAGGGTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPVSSGS*GQGSLL
Trigger: CAAAAGGGAACCCTGCCCCCAGCTTCCACTGGACAC...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACCTGTTTCGTGTCCAGTaGAAGCTGGGGGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNLFRVQ*KLGAGF
Trigger: GAACCCTGCCCCCAGCTTCCACTGGACACGAAACAG...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCAGACCTCCTCCTCATaGACACCCGGGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHQTSSS*TPGGPW
Trigger: CCAAGGACCCCCGGGTGTCCATGAGGAGGAGGTCTG...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAAAAGGAGCGCCCTCTTaGACCACGACAGGGTCTAGG +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRKGAPS*TTTGSR
Trigger: CCTAGACCCTGTCGTGGTCCAAGAGGGCGCTCCTTT...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATAAAGGAGCGCCCTCTTaGACCACGACAGGGTCTAGG +
Preference number: 4 (lower is better)
Translates to: GLVGGLVATGPHSLADPHKGAPS*TTTGSR
Trigger: CCTAGACCCTGTCGTGGTCCAAGAGGGCGCTCCTTT...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACAAAGGAGCGCCCTCTTaGACCACGACAGGGTCTAGG +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNKGAPS*TTTGSR
Trigger: CCTAGACCCTGTCGTGGTCCAAGAGGGCGCTCCTTT...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGGTTTGGGGTTTCCATTaGCTCGACACACCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWVWGFH*LDTPVS
Trigger: GGAGACTGGTGTGTCGAGCCAATGGAAACCCCAAAC...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTGGCCACCTCACGGTTTaGGTTAGGTGGTGCCGATTG +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPGHLTV*VRWCRL
Trigger: CAATCGGCACCACCTAACCCAAACCGTGAGGTGGCC...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTGCCCTGCTGCTGATCTaGGTGTCCCGGAAGATGATG +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPALLLI*VSRKMM
Trigger: CATCATCTTCCGGGACACCCAGATCAGCAGCAGGGC...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCCCGTGGTGCCCCTTCTaGCCACCTGGTCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRPWCPF*PPGPRA
Trigger: TGCCCGAGGACCAGGTGGCCAGAAGGGGCACCACGG...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTGGTCTAGCTCGGTGCTaGCGACACACGTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPGLARC*RHTCNC
Trigger: GCAGTTACACGTGTGTCGCCAGCACCGAGCTAGACC...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTGCCTTGGCCAGGTCTTaGTCTAGCTCGGTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPALARS*SSSVLA
Trigger: CGCCAGCACCGAGCTAGACCAAGACCTGGCCAAGGC...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGTCGGTAGCGCTCGGATaGGAGGCTGGGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVSVALG*EAGVAA
Trigger: AGCAGCCACCCCAGCCTCCCATCCGAGCGCTACCGA...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGCAATGTAGCGCAGGTTaGGGCCAAAGGCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVQCSAG*GQRPRW
Trigger: CCACCTCGGCCTTTGGCCCCAACCTGCGCTACATTG...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGCAATGTAGCGCAGGTTaGGGCCAAAGGCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVQCSAG*GQRPRW
Trigger: CCACCTCGGCCTTTGGCCCCAACCTGCGCTACATTG...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCGACTCTCCGTGGTGGTaGTGGCGGCAGCAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTDSPWW*WRQQWL
Trigger: CAACCACTGCTGCCGCCACCACCACCACGGAGAGTC...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATATGGGAGGACTCTCCGTaGTGGTGGTGGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIWEDSP*WWWRQQ
Trigger: CTGCTGCCGCCACCACCACCACGGAGAGTCCTCCCA...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTTGTCCGCTTGGTTGTTaGTGTAAGCTGTACTGGTCA +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQACPLGC*CKLYWS
Trigger: TGACCAGTACAGCTTACACCAACAACCAAGCGGACA...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAAGCCATCCTCTTCCTTaGGGTCTTCAGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRSHPLP*GLQGQG
Trigger: CCCTTGGCCCTGAAGACCCCAAGGAAGAGGATGGCT...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCTTTTTGACCGTGTACTaGCCGATGAAGGAGCCGTCT +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALFLTVY*PMKEPS
Trigger: AGACGGCTCCTTCATCGGCCAGTACACGGTCAAAAA...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTGTGGCTGTGCCTGGGTaGGCTCCGTTAGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPVAVPG*APLGQR
Trigger: TCTCTGGCCTAACGGAGCCCACCCAGGCACAGCCAC...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACAGTGGTGGCTGTGCCTaGGTGGGCTCCGTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHSGGCA*VGSVRP
Trigger: TGGCCTAACGGAGCCCACCCAGGCACAGCCACCACT...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACATGGCTTGGTGGCTACTaGTCCTCACAGCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTWLGGY*SSQLGR
Trigger: TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGTGACGGCTTCCCCAGAGCCCACCTGCGTCCTGGCGCTGAGGGTAAAGCGGTATTGTGGGTGGCTTGGTaGCTACTGGTCCTCACAGCT +
Preference number: 4 (lower is better)
Translates to: CDGFPRAHLRPGAEGKAVLWVAW*LLVLTA
Trigger: AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAA...TACCGCTTTACCCTCAGCGCCAGGACGCAGGTGGGCTCTGGGGAAGCCGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTGAGGGGGCTTGTGGGTaGCTTGGTGGCTACTGGTCC +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPEGACG*LGGYWS
Trigger: GGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTC...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATACCAGCTCTCCCACACTaGTGGCACCCGGGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIPALPH*WHPGLK
Trigger: CTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGG...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGCAAGGGCGGACAGTGTaGTGGAACGCTCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEQGRTV*WNARGG
Trigger: GCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTG...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGAGAAAGGCATCCTTTaGAAATGCATTGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLREKGIL*KCIGPE
Trigger: CTCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTC...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCTGATTTTCTTCTGCTaGAGGTACACAGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQALIFFC*RYTVTG
Trigger: GCCAGTGACTGTGTACCTCCAGCAGAAGAAAATCAG...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCAGCTGATCCATTCCTaGGGATCAGCTTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTQLIHS*GSASPS
Trigger: GGAGGGTGAAGCTGATCCCCAGGAATGGATCAGCTG...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGCGGAGGCTGTGCCCATaGCAGCTGATCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVRRLCP*QLIHSW
Trigger: CCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCG...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACCCAGGCCCCCTGGCTaGCAGCCGGAGAGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQPRPPG*QPERLK
Trigger: TTTGAGCCTCTCCGGCTGCCAGCCAGGGGGCCTGGG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGGAAGGACAGAGCCCTaGTCTGGCCCAGGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTGRTEP*SGPGPL
Trigger: CAGGGGGCCTGGGCCAGACCAGGGCTCTGTCCTTCC...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGCTCAGTTCTGGGCTATaGTTTCTTACCAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: QLSSATAPALPHWWHPGLLSSGL*FLTSRE
Trigger: CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAG...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAAGCAATGTTGGCACTaGCTGATTTTCAGACCTGTG +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAAKQCWH*LIFRPV
Trigger: CACAGGTCTGAAAATCAGCCAGTGCCAACATTGCTT...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTTATGAATGCGCTATGTaGGCTCAGTTGCACCTTGCA +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAYECAM*AQLHLA
Trigger: TGCAAGGTGCAACTGAGCCCACATAGCGCATTCATA...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGGCTATCCTATTCCACTaGCCCAGATCTGCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: QLSSATAPALPHWWHPGLAILFH*PRSALN
Trigger: ATTAAGGGCAGATCTGGGCCAGTGGAATAGGATAGC...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGCAGCAAATCCCAGGGTaGCAGCTTGCATGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVQQIPG*QLAWAL
Trigger: CAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTG...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGAGCATGGGTCGGGAGTaGGAGCAGGACAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVSMGRE*EQDRRW
Trigger: CCACCTTCTGTCCTGCTCCCACTCCCGACCCATGCT...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTCTCCGGGGTCCAGCATaGGTCGGGAGTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTLRGPA*VGSGSR
Trigger: CCTGCTCCCACTCCCGACCCATGCTGGACCCCGGAG...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCCTGCTGGGGAGGGGGTaGGGCTGGTCAGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTLLGRG*GWSVPG
Trigger: CCCTGGCACTGACCAGCCCCACCCCCTCCCCAGCAG...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCGGGCCACTGCTTCTCTaGCTGCTGGGGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGGPLLL*LLGRGW
Trigger: CCACCCCCTCCCCAGCAGCCAGAGAAGCAGTGGCCC...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCACTTTTCCCTGAAAGTTaGCCTCAGAGAAAACACAGC +
Preference number: 4 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPLFPES*PQRKHS
Trigger: GCTGTGTTTTCTCTGAGGCCAACTTTCAGGGAAAAG...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000404076.5
3UTR CAA 72 bp AGCAGCCCTTCCCAGTCACCAGGTGGTGTGGCAGACTaGCTCATCGTCCCTTCCTGCCCTAAGGGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: SSPSQSPGGVAD*LIVPSCPKGLL
Trigger: AAGCAGGCCCTTAGGGCAGGAAGGGACGATGAGCAAGTCTGCCACACCACCTGGTGACTGGGAAGGGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 72 bp GCACAGGGCGCCAGAAAGAGCCCGCTGCCCGTGCCATaGCTTGGGCAAAGTTTCCCACTCCTTCAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: AQGARKSPLPVP*LGQSFPLLQLR
Trigger: TCTGAGCTGAAGGAGTGGGAAACTTTGCCCAAGCAATGGCACGGGCAGCGGGCTCTTTCTGGCGCCCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 72 bp AGCCGGAGGACGGCTGAGTTAACGCTGCCGGGGTACTaGGAATGGTCATGCCAGACCCCAGGTTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: SRRTAELTLPGY*EWSCQTPGWNW
Trigger: CCAGTTCCAACCTGGGGTCTGGCATGACCATTCCAAGTACCCCGGCAGCGTTAACTCAGCCGTCCTCCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR CAA 72 bp CACCACGCCACGGAGGCGGTCACCAGGGAAGCTGGCTaGCTGTCTCTTCTGAGACACCCACAGGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: HHATEAVTREAG*LSLLRHPQVLQ
Trigger: CTGAAGAACCTGTGGGTGTCTCAGAAGAGACAGCAAGCCAGCTTCCCTGGTGACCGCCTCCGTGGCGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR TCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATTGCTCATCCAGAAGATaGCCGGGGATGGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: GLVGGLVATGPHSLADPHCSSRR*PGMEVQ
Trigger: CTGGACTTCCATCCCCGGTCATCTTCTGGATGAGCA...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGCACGTTTGTCTTGGGTaGTGGGCTCCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVHVCLG*WAPWSC
Trigger: GCAGCTCCATGGAGCCCATCACCCAAGACAAACGTG...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCTCTCCGTTATGGCCCTaGGAGACACGTTTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTSPLWP*ETRLSW
Trigger: CCAAGACAAACGTGTCTCTCAGGGCCATAACGGAGA...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGATTAGTTGGAGTGGCCTaGTCAGCTAGCACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRLVGVA*SASTVR
Trigger: CCTCACCGTGCTAGCTGATCAGGCCACTCCAACTAA...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGCACGGAACTGGTAGTTaGCATACGGGGACAGCCGGA +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVHGTGS*HTGTAG
Trigger: TCCGGCTGTCCCCGTATGTCAACTACCAGTTCCGTG...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GTAACCGATGACGGACTCTGGCTCAGGGCCCTTCCCGAAGTCATTTTCAGCCTGCTCCGGAGTAACCGATaGCGGACTCTGGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VTDDGLWLRALPEVIFSLLRSNR*RTLAQG
Trigger: GCCCTGAGCCAGAGTCCGTCATCGGTTACTCCGGAG...CAGGCTGAAAATGACTTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATCGGTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR TCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTTTTGGATGCTCAGGATaGTCCCATTCCAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAFGCSG*SHSRLI
Trigger: AATCAACCTGGAATGGGATCATCCTGAGCATCCAAA...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCATTCGGGGGTGCTGGTaGCTCCTCTGTGACGGCTTC +
Preference number: 4 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIIRGCW*LLCDGF
Trigger: GAAGCCGTCACAGAGGAGTCACCAGCACCCCCGAAT...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAATTGTGCTTCCAGGTaGTGTTGGCCCATTTACTGT +
Preference number: 4 (lower is better)
Translates to: QLSSATAPALPHWWHPGLNCASR*CWPIYC
Trigger: ACAGTAAATGGGCCAACATCACCTGGAAGCACAATT...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTCCGTCCAGAGATGTCTaGCTGCCCTGCAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLPSRDV*LPCRGL
Trigger: CAAGCCCCTGCAGGGCAGTCAGACATCTCTGGACGG...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTCAGGCTCCCTCCAGCTaGGCTCAGCCACGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGQAPSS*AQPRLQ
Trigger: CTGGAGCCGTGGCTGAGCTCAGCTGGAGGGAGCCTG...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGAGGCTTGGCCCAAATaGCCATTACACACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTEAWPK*PLHTLR
Trigger: CCTGAGAGTGTGTAATGGTCATTTGGGCCAAGCCTC...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTAGTCTTTACATCTGTTaGACTCCAGCCCAGCAAATC +
Preference number: 4 (lower is better)
Translates to: DSVVERSGWLRDRARGQASLYIC*TPAQQI
Trigger: GATTTGCTGGGCTGGAGTTCAACAGATGTAAAGACT...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTCACGTCACAGGCGACTaGTGCTCAGCTCAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPHVTGD*CSAQGE
Trigger: CTCCCCTTGAGCTGAGCATCAGTCGCCTGTGACGTG...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGCCTGACCCGGCCACTTaGCTGCAGGCACTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKPDPAT*LQALPS
Trigger: CGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGG...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGAACACACAGCATCCTaGGACAGGACCAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVEHTAS*DRTSPR
Trigger: CCTTGGGCTGGTCCTGTCTCAGGATGCTGTGTGTTC...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR GCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGCAGAGGAGGAAGGCTaGATGGACCCAGGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFAEEEG*MDPGRR
Trigger: CCGCCGCCCTGGGTCCATGCAGCCTTCCTCCTCTGC...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGGTGAAAGGGTTCTTCTaGTGGATGGTGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWVKGFF*WMVWVK
Trigger: CTTCACCCACACCATCCAGCAGAAGAACCCTTTCAC...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGGTGAAAGGGTTCTTCTaGTGGATGGTGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVVKGFF*WMVWVK
Trigger: CTTCACCCACACCATCCAGCAGAAGAACCCTTTCAC...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAACCTTTCTTGTACCATaGGATGTCTGGTGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAETFLVP*DVWCWD
Trigger: GTCCCAACACCAGACATCGCATGGTACAAGAAAGGT...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTAGATCGTGTGCCGGATaGTGCCCATCTTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTARSCAG*CPSCWR
Trigger: CCTCCAACAAGATGGGCAGCATCCGGCACACGATCT...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACAGATCGTGTGCCGGATaGTGCCCATCTTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNRSCAG*CPSCWR
Trigger: CCTCCAACAAGATGGGCAGCATCCGGCACACGATCT...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCATAAACATGGTAGTTaGCACCATCCAGGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAHKHGS*HHPGCF
Trigger: GAAGCAACCTGGATGGTGGCAACTACCATGTTTATG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGACACAGGTGTAGATaGCCTGGTCCTCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPRHRCR*PGPLCG
Trigger: TCCGCAAAGAGGACCAGGGCATCTACACCTGTGTCG...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCCCAGCTGCACCGTGGTaGCCCTTCTGGCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRPAAPW*PFWPPG
Trigger: ACCAGGTGGCCAGAAGGGGCACCACGGTGCAGCTGG...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAACCCGACACTCCAGCTaGACCGTGGTGCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEITRHSS*TVVPLL
Trigger: CAGAAGGGGCACCACGGTGCAGCTGGAGTGTCGGGT...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGCTTGGTCTAGCTCGGTaGTGGCGACACACGTGTAAC +
Preference number: 4 (lower is better)
Translates to: MVKGGHWSDSARLAYASQLGLAR*WRHTCN
Trigger: GTTACACGTGTGTCGCCAGCACCGAGCTAGACCAAG...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTTCCCCAGAGCCCACCTaGGTCCTGGCGCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTSPEPT*VLALRV
Trigger: TACCCTCAGCGCCAGGACGCAGGTGGGCTCTGGGGA...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGCTGTCGTCACTCTCCTaGTGCTTGATGGTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVLSSLS*CLMVPS
Trigger: GGACGGCACCATCAAGCAGCAGGAGAGTGACGACAG...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACAGCAGCAAGGAGGCCTaGGCACCTTCTCCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHSSKEA*APSPCQ
Trigger: TTGGCAGGGAGAAGGTGCGCAGGCCTCCTTGCTGCT...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTAGTCCTTTCTATCAGTaGCCACTCCTGTTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: PAELSHGSSSPTLVAPGASPFYQ*PLLFLK
Trigger: TTTGAGGAACAGGAGTGGGCACTGATAGAAAGGACT...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGAGGCCACGTGGACAGGTaGCCTCTACTCTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRGHVDR*PLLWTG
Trigger: CCCTGTCCAGAGTAGAGGGCACCTGTCCACGTGGCC...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGAGGGCCTGCTTTCGGTaGAATGGGTACGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVRACFR*NGYAGM
Trigger: CATGCCAGCGTACCCATTGCACCGAAAGCAGGCCCT...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGCGCTGCCCGTGCCATTaGTTGGGCAAAGTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVRCPCH*LGKVSH
Trigger: GTGGGAAACTTTGCCCAAGCAATGGCACGGGCAGCG...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTCCAGAAAGAGCCCGCTaGCCGTGCCATTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPPERAR*PCHCLG
Trigger: GCCCAAGCAATGGCACGGGCAGCGGGCTCTTTCTGG...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGCCAGAAAGAGCCCGCTaGCCGTGCCATTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVPERAR*PCHCLG
Trigger: GCCCAAGCAATGGCACGGGCAGCGGGCTCTTTCTGG...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAAATGAGTGGGGAGCGGTaGCTTGTGCCGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQMSGER*LVPASQ
Trigger: CTGGGAGGCCGGCACAAGGCACCGCTCCCCACTCAT...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCACTGCCCCGGGCCACTaGTTCTCTGGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRTAPGH*FSGCWG
Trigger: TCCCCAGCAGCCAGAGAAGCAGTGGCCCGGGGCAGT...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTTCTTCAGCAAGCTaGTCTCCCTCCAGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTGSSAS*SPSSSR
Trigger: CCTACTACTGGAGGGAGAGCAGCTTGCTGAAGAACC...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404076.5
CDS-3UTR GCA 90 bp TGTGACGGCTTCCCCAGAGCCCACCTGCGTCCTGGCGCTGAGGGTAAAGCGGTAGGTTCTTCAGCAAGCTaGTCTCCCTCCAGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: CDGFPRAHLRPGAEGKAVGSSAS*SPSSSR
Trigger: CCTACTACTGGAGGGAGAGCAGCTTGCTGAAGAACC...TACCGCTTTACCCTCAGCGCCAGGACGCAGGTGGGCTCTGGGGAAGCCGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACCTGCTTGGTGATGGTTaGCGGCTGCGTCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNLLGDG*RLRQLI
Trigger: AATGAGCTGACGCAGCCGCCAACCATCACCAAGCAG...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403080.5
CDS-3UTR CCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGCTGTTTCGTGTCCAGTaGAAGCTGGGGGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVLFRVQ*KLGAGF
Trigger: GAACCCTGCCCCCAGCTTCCACTGGACACGAAACAG...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATGCAGGCGGATCCTATTaGACAGGGCCGTGCCAAATT +
Preference number: 4 (lower is better)
Translates to: GLVGGLVATGPHSLADPHAGGSY*TGPCQI
Trigger: AATTTGGCACGGCCCTGTCCAATAGGATCCGCCTGC...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGGATACATGAAGCTTaGTGTTCTTTCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARGIHEA*CSFCNS
Trigger: GGAGTTGCAGAAAGAACACCAAGCTTCATGTATCCC...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTCCACGAAGCACCATCTaGCTGCTCGCGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVPRSTI*LLAVPW
Trigger: CCAGGGCACCGCGAGCAGCCAGATGGTGCTTCGTGG...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCCCACGAAGCACCATCTaGCTGCTCGCGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGPRSTI*LLAVPW
Trigger: CCAGGGCACCGCGAGCAGCCAGATGGTGCTTCGTGG...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGTGCTGCCCATCTTGTTaGAGGCCAGGCAGAAATACT +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWCCPSC*RPGRNT
Trigger: AGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCA...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGCCATTCACCATCCACTaGACAGTGGGTTTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWPFTIH*TVGLGF
Trigger: AAACCCCAAACCCACTGTCCAGTGGATGGTGAATGG...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTATCACTCGAATGAGCTaGTTCCGGGGCGACAGCATC +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTAITRMS*FRGDSI
Trigger: GATGCTGTCGCCCCGGAACCAGCTCATTCGAGTGAT...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACACTTTGCCCAGGATGTTaGTGGCGACACAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTLCPGC*WRHRCR
Trigger: TCTACACCTGTGTCGCCACCAACATCCTGGGCAAAG...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTACCTCCAGGCGGACTTaGTTTTCAGCTTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTATSRRT*FSALPR
Trigger: CCTGGGCAAAGCTGAAAACCAAGTCCGCCTGGAGGT...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTACCTCCAGGCGGACTTaGTTTTCAGCTTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPTSRRT*FSALPR
Trigger: CCTGGGCAAAGCTGAAAACCAAGTCCGCCTGGAGGT...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGGTCTAGCTCGGTGCTaGCGACACACGTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVGLARC*RHTCNC
Trigger: GCAGTTACACGTGTGTCGCCAGCACCGAGCTAGACC...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGACCCCAGGTTGGAACTaGTCTTCTTCAAACTGGACG +
Preference number: 4 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVTPGWN*SSSNWT
Trigger: CGTCCAGTTTGAAGAAGACCAGTTCCAACCTGGGGT...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGATGGGAGGCTGGGGTaGCTGCTCCCAACCTCGTTG +
Preference number: 4 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPDGRLG*LLPTSL
Trigger: CAACGAGGTTGGGAGCAGCCACCCCAGCCTCCCATC...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGATAGGGCACGTAGACTaGGGTCTGCCCCACCACGTA +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVIGHVD*GLPHHV
Trigger: TACGTGGTGGGGCAGACCCCAGTCTACGTGCCCTAT...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCAATCATGATCCCATTTaGATGCTCAGGATGATCCCA +
Preference number: 4 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLNHDPI*MLRMIP
Trigger: TGGGATCATCCTGAGCATCCAAATGGGATCATGATT...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGAATCATGATCCCATTTaGATGCTCAGGATGATCCCA +
Preference number: 4 (lower is better)
Translates to: PRPRADSVVERSGWLRDRNHDPI*MLRMIP
Trigger: TGGGATCATCCTGAGCATCCAAATGGGATCATGATT...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTCCCGGAGGTGGTGGTaGGAGGACTCTCCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASSRRWW*EDSPWW
Trigger: CCACCACGGAGAGTCCTCCCACCACCACCTCCGGGA...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGTCCCGGAGGTGGTGGTaGGAGGACTCTCCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LADPHIVPLLLKVVVASWSRRWW*EDSPWW
Trigger: CCACCACGGAGAGTCCTCCCACCACCACCTCCGGGA...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GATGACGGACTCTGGCTCAGGGCCCTTCCCGAAGTCATTTTCAGCCTGGACTCGCCAATGAACCAGCCCTaGGTGGCGATGTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: DDGLWLRALPEVIFSLDSPMNQP*VAMSAW
Trigger: CCAAGCGGACATCGCCACCCAGGGCTGGTTCATTGG...CGAGTCCAGGCTGAAAATGACTTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAAGTGGTGGCTGTGCCTaGGTGGGCTCCGTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEISGGCA*VGSVRP
Trigger: TGGCCTAACGGAGCCCACCCAGGCACAGCCACCACT...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTTGGGAGGGGGCTTGTaGGTGGCTTGGTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPLGGGL*VAWWLL
Trigger: CAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAA...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp TCGGACTTTAACTTCAGTGGGCGCAGCCCTGGGATAATCTTCTCCGGAGTAACCGCTCTCCCACACTGGTaGCACCCGGGGCTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SDFNFSGRSPGIIFSGVTALPHW*HPGLKG
Trigger: CCCCTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGC...GGTTACTCCGGAGAAGATTATCCCAGGGCTGCGCCCACTGAAGTTAAAGTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACAAGGGCGGACAGTGTaGTGGAACGCTCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQQGRTV*WNARGG
Trigger: GCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGCCATCTCCTCGAGGGTaGCAGCATGGGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASPSPRG*QHGPWP
Trigger: TGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGG...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAAGACCTGCTCAGTCTTaGGGCAAGTCCCCATCCACA +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRRPAQS*GKSPST
Trigger: TGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCT...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGCCCAGGCCCCCTGGCTaGCAGCCGGAGAGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: TKSIESSLGGGITTLSTVPRPPG*QPERLK
Trigger: TTTGAGCCTCTCCGGCTGCCAGCCAGGGGGCCTGGG...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGGGAAGGACAGAGCCCTaGTCTGGCCCAGGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: TKSIESSLGGGITTLSTVGRTEP*SGPGPL
Trigger: CAGGGGGCCTGGGCCAGACCAGGGCTCTGTCCTTCC...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGTTCAAACAACCTTATTaGCTCAGTTCTGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQFKQPY*LSSGLW
Trigger: CCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGATGTACGGTGCAGTATaGAATGAGTGTCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAAMYGAV*NECLRN
Trigger: GTTTCTCAGACACTCATTCCATACTGCACCGTACAT...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGCTGCTTTCGGTGCAATaGGTACGCTGGCATGTACGG +
Preference number: 4 (lower is better)
Translates to: MVKGGHWSDSARLAYASQLLSVQ*VRWHVR
Trigger: CCGTACATGCCAGCGTACCCATTGCACCGAAAGCAG...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGCCCAGCCAGACAGACTaGAGCGCCGATGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEEPSQTD*SADGMV
Trigger: CACCATGCCATCGGCGCTCCAGTCTGTCTGGCTGGG...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTCAGGGGCAGGGGCAATaGGGTGGACCAGATGTCTCC +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLQGQGQ*GGPDVS
Trigger: GGAGACATCTGGTCCACCCCATTGCCCCTGCCCCTG...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAAAGCAATGTTGGCACTaGCTGATTTTCAGACCTGTG +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRKQCWH*LIFRPV
Trigger: CACAGGTCTGAAAATCAGCCAGTGCCAACATTGCTT...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCCAGGGCAAGCAATGTTaGCACTGGCTGATTTTCAGA +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALQGKQC*HWLIFR
Trigger: TCTGAAAATCAGCCAGTGCCAACATTGCTTGCCCTG...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGACAATGTTGGAATCTaGATCGCTATCCCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARDNVGI*IAIPWK
Trigger: CTTCCAAGGGATAGCGATCCAGATTCCAACATTGTC...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGATTATCTCACGCAACTTaGATGTGGACTAACCCTCTC +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRLSHAT*MWTNPL
Trigger: GAGAGGGTTAGTCCACATCCAAGTTGCGTGAGATAA...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CAAGGTGGGAGGCAGCTGTCCCCTGACCGATGGCAGTGTACTTCCCGAACCCTGCTCCATGCTACTCCTTaGCCACCACGCAGAGCTCAA +
Preference number: 4 (lower is better)
Translates to: QGGRQLSPDRWQCTSRTLLHATP*PPRRAQ
Trigger: TTGAGCTCTGCGTGGTGGCCAAGGAGTAGCATGGAG...CAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTCCCACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGCTGCTGGGGAGGGGGTaGGGCTGGTCAGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKLLGRG*GWSVPG
Trigger: CCCTGGCACTGACCAGCCCCACCCCCTCCCCAGCAG...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGGGGCCACTGCTTCTCTaGCTGCTGGGGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKGPLLL*LLGRGW
Trigger: CCACCCCCTCCCCAGCAGCCAGAGAAGCAGTGGCCC...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTCTGCTTGGTGATGGTTaGCGGCTGCGTCAGATCCAT +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTALLGDG*RLRQIH
Trigger: ATGGATCTGACGCAGCCGCCAACCATCACCAAGCAG...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404076.5
CDS-3UTR TCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGTCGCTGACTGCTTGGTaGTGGTTGGCGGCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEESLTAW*WLAAAS
Trigger: TGACGCAGCCGCCAACCATCACCAAGCAGTCAGCGA...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCGGTCCTTGGCGATGTTaGAGAATCTGCTGTTTCGTG +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTGPWRC*RICCFV
Trigger: CACGAAACAGCAGATTCTTCAACATCGCCAAGGACC...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTTTGCGGGCGAAGCACTaGTATTCCCCCTCATATTCC +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPLRAKH*YSPSYS
Trigger: GGAATATGAGGGGGAATATCAGTGCTTCGCCCGCAA...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTCACGTTTGTCTTGGGTaGTGGGCTCCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPHVCLG*WAPWSC
Trigger: GCAGCTCCATGGAGCCCATCACCCAAGACAAACGTG...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACTCTCCGTTATGGCCCTaGGAGACACGTTTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNSPLWP*ETRLSW
Trigger: CCAAGACAAACGTGTCTCTCAGGGCCATAACGGAGA...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACGCACATCCAGCACACTaGCAAAGGCGTTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHAHPAH*QRRWPA
Trigger: TGCTGGCCAACGCCTTTGTCAGTGTGCTGGATGTGC...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACAAAGAATCACTCGAATaGGCTGGTTCCGGGGCGACA +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNKESLE*AGSGAT
Trigger: TGTCGCCCCGGAACCAGCTCATTCGAGTGATTCTTT...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATATCCTGGTGGGGTCTTTaGCCTCCAGGCGGACTTGGT +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEISWWGL*PPGGLG
Trigger: ACCAAGTCCGCCTGGAGGTCAAAGACCCCACCAGGA...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGGATCAGCTAGCACGGTaGGGTAGGCCTTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVDQLAR*GRPWPG
Trigger: ACCTGGCCAAGGCCTACCTCACCGTGCTAGCTGATC...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
CDS-3UTR TCA 90 bp GATGACGGACTCTGGCTCAGGGCCCTTCCCGAAGTCATTTTCAGCCTGGACTCGCTCTCCGCCTCCACTTaGCAATGTAGCGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: DDGLWLRALPEVIFSLDSLSAST*QCSAGW
Trigger: CCAACCTGCGCTACATTGTCAAGTGGAGGCGGAGAG...CGAGTCCAGGCTGAAAATGACTTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR TCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGAGAGAGCCCCACACTGTaGCGTTGTTCCAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRESPTL*RCSRPL
Trigger: GAGAGGCCTGGAACAACGTCACAGTGTGGGGCTCTC...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACTCCGGAGTAACCGATaGCGGACTCTGGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQLRSNR*RTLAQG
Trigger: GCCCTGAGCCAGAGTCCGTCATCGGTTACTCCGGAG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCTTTGGATGCTCAGGATaGTCCCATTCCAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALFGCSG*SHSRLI
Trigger: AATCAACCTGGAATGGGATCATCCTGAGCATCCAAA...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTGGTAAAGCGGTAGCGTaGCACGGGGTCCGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPGKAVA*HGVRSL
Trigger: CAAAGAACGGACCCCGTGTCACGCTACCGCTTTACC...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTCCGTCTTCATTGAACTaGCCCTCGCCACCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLPSSLN*PSPPSP
Trigger: TGGCGAGGGTGGCGAGGGTCAGTTCAATGAAGACGG...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCAGGAGCCGTCTTCATTaGACTGACCCTCGCCACCCT +
Preference number: 4 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIRSRLH*TDPRHP
Trigger: AGGGTGGCGAGGGTCAGTTCAATGAAGACGGCTCCT...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGAACCAACAGAAAAGGTaGGCGTGTGCCGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVNQQKR*ACAEAK
Trigger: CTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTT...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGCCCAGCTCAGCAACTaGCAAGGCCGAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFAQLSN*QGRGRG
Trigger: CCCTCTGCCTCGGCCTTGTCAGTTGCTGAGCTGGGC...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATCCTGGGTTTCACCAGTaGGGAGGCATGAAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: GLVGGLVATGPHSLADPHPGFHQ*GGMKSK
Trigger: TTTGGACTTCATGCCTCCTCACTGGTGAAACCCAGG...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTCCTGGGTTTCACCAGTaGGGAGGCATGAAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTAPGFHQ*GGMKSK
Trigger: TTTGGACTTCATGCCTCCTCACTGGTGAAACCCAGG...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGAATTGGCTGAGAAGATaGTATCTGCTAGAGATGGAA +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQNWLRR*YLLEME
Trigger: TTCCATCTCTAGCAGATATCATCTTCTCAGCCAATT...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCGGTGAGGACGTGTGTTaGGTGGCCACTTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIGEDVC*VATSGP
Trigger: AGGACCAGAAGTGGCCACTCAACACACGTCCTCACC...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGATTAGGTGGGGAGGATaGAGGCAGCACCTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVIRWGG*RQHLRS
Trigger: AGACCGAAGGTGCTGCCTTCATCCTCCCCACCTAAT...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAGAGGCTTGGCCCAAATaGCCATTACACACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGREAWPK*PLHTLR
Trigger: CCTGAGAGTGTGTAATGGTCATTTGGGCCAAGCCTC...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR TCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGAATGTTGGCACTGGCTaGTTTTCAGACCTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVNVGTG*FSDLWS
Trigger: TGACCACAGGTCTGAAAATCAGCCAGTGCCAACATT...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTTGCACCAAGGTGTCATaGGTGGGGAGCGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPCTKVS*VGSGAL
Trigger: CAAGGCACCGCTCCCCACTCATGACACCTTGGTGCA...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATAACAGCAGCTTCAGGTaGGGCCTGAGACACTGTTTG +
Preference number: 4 (lower is better)
Translates to: GLVGGLVATGPHSLADPHNSSFR*GLRHCL
Trigger: CAAACAGTGTCTCAGGCCTCACCTGAAGCTGCTGTT...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCGCAGCTGTGGTGAGATaGAAGAACACTGACTGGACA +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTAAVVR*KNTDWT
Trigger: TGTCCAGTCAGTGTTCTTTCATCTCACCACAGCTGC...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GCAGGACACTGGAACGAGGTGCAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAGGCAGAGGGACAACACTaGCTGAGGACATTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: AGHWNEVQRQAAGLLLPKAEGQH*LRTLQL
Trigger: CAACTGCAATGTCCTCAGTCAGTGTTGTCCCTCTGC...CTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGCCTGACCCGGCCACTTaGCTGCAGGCACTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKPDPAT*LQALPS
Trigger: CGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGG...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACCAGCACAGCTTGTTCTaGAACTGGCAGCTCCCTAAC +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNQHSLF*NWQLPN
Trigger: GTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTG...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCACCGGCCGCCCGCCACTaGGGAAGTCAATCACCAGGG +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPPAARH*GSQSPG
Trigger: CCCTGGTGATTGACTTCCGCAGTGGCGGGCGGCCGG...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTGCTTGGTGTTCTTTCTaGAACTCCTCGGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPAWCSF*NSSGGE
Trigger: CTCACCACCCGAGGAGTTGCAGAAAGAACACCAAGC...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403080.5
CDS-3UTR GCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGTCCAGGTTGCTTCCTTaGCCATTCTTAAACCATCGC +
Preference number: 4 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVSRLLP*PFLNHR
Trigger: GCGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGA...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCACCCGACACTCCAGCTaGACCGTGGTGCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGTRHSS*TVVPLL
Trigger: CAGAAGGGGCACCACGGTGCAGCTGGAGTGTCGGGT...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAAGCCCTGGTCCCGCTCTaGCACCCCAAAGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQALVPL*HPKDGQ
Trigger: CTGACCATCTTTGGGGTGGCAGAGCGGGACCAGGGC...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGTCTCCAGGTTGGGCTaGCGGACTCGGAAACGCCTA +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEVSRLG*RTRKRL
Trigger: TAGGCGTTTCCGAGTCCGGCAGCCCAACCTGGAGAC...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR GCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGAGCAGCAAGGAGGCCTaGGCACCTTCTCCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVSSKEA*APSPCQ
Trigger: TTGGCAGGGAGAAGGTGCGCAGGCCTCCTTGCTGCT...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGCGTCTTCAGAGTCAATaGAGCTCACATCTTAGATAT +
Preference number: 4 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPRLQSQ*SSHLRY
Trigger: ATATCTAAGATGTGAGCTGCATTGACTCTGAAGACG...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGGGCCACGTGGACAGGTaGCCTCTACTCTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: LADPHIVPLLLKVVVASWGHVDR*PLLWTG
Trigger: CCCTGTCCAGAGTAGAGGGCACCTGTCCACGTGGCC...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAAGGCCACGTGGACAGGTaGCCTCTACTCTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQGHVDR*PLLWTG
Trigger: CCCTGTCCAGAGTAGAGGGCACCTGTCCACGTGGCC...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTGGGAGCAGTGCCTTATaGCCCAAACACACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTAGSSAL*PKHTSK
Trigger: TTTGCTGGTGTGTTTGGGGCATAAGGCACTGCTCCC...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAATGGAAGGGGAGCAGTaGCTTATGCCCCAAACACAC +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRMEGEQ*LMPQTH
Trigger: GTGTGTTTGGGGCATAAGGCACTGCTCCCCTTCCAT...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGATGGAAGGGGAGCAGTaGCTTATGCCCCAAACACAC +
Preference number: 4 (lower is better)
Translates to: MVKGGHWSDSARLAYASQMEGEQ*LMPQTH
Trigger: GTGTGTTTGGGGCATAAGGCACTGCTCCCCTTCCAT...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGGACAGATCAGCGCTaGATAAGGCATACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTGTDQR*IRHTKS
Trigger: GCTCTTTGTATGCCTTATGCAGCGCTGATCTGTCCC...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCGGCCACTTCTGGTCCTaGCGGAACACTTGCATAGGC +
Preference number: 4 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTGHFWS*RNTCIG
Trigger: GCCTATGCAAGTGTTCCGGCAGGACCAGAAGTGGCC...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR GCA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGTTTACCCTGTCCCCTTaGACTGTGATAAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: MVKGGHWSDSARLAYASQFTLSP*TVISCP
Trigger: GGGGCAGCTTATCACAGTGCAAGGGGACAGGGTAAA...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GATGACGGACTCTGGCTCAGGGCCCTTCCCGAAGTCATTTTCAGCCTGGACTCGACTCCTTGGTCTCACTaGGAGGCCCATCACCTCTCC +
Preference number: 4 (lower is better)
Translates to: DDGLWLRALPEVIFSLDSTPWSH*EAHHLS
Trigger: GGAGAGGTGATGGGCCTCGCAGTGAGACCAAGGAGT...CGAGTCCAGGCTGAAAATGACTTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCCAGACCTCCTCCTCATaGACACCCGGGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGQTSSS*TPGGPW
Trigger: CCAAGGACCCCCGGGTGTCCATGAGGAGGAGGTCTG...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGCAGACCTCCTCCTCATaGACACCCGGGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASQTSSS*TPGGPW
Trigger: CCAAGGACCCCCGGGTGTCCATGAGGAGGAGGTCTG...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGTACCATGCGATGTCTaGTGTTGGGACCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPVPCDV*CWDPGG
Trigger: GCCTCCGGGGTCCCAACACCAGACATCGCATGGTAC...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCTGCTGCCCATCTTGTTaGAGGCCAGGCAGAAATACT +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTCCPSC*RPGRNT
Trigger: AGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCA...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACGTTTGGGGTTTCCATTaGCTCGACACACCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNVWGFH*LDTPVS
Trigger: GGAGACTGGTGTGTCGAGCCAATGGAAACCCCAAAC...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTGTTTGGGGTTTCCATTaGCTCGACACACCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTAVWGFH*LDTPVS
Trigger: GGAGACTGGTGTGTCGAGCCAATGGAAACCCCAAAC...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTGTTTGGGGTTTCCATTaGCTCGACACACCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPVWGFH*LDTPVS
Trigger: GGAGACTGGTGTGTCGAGCCAATGGAAACCCCAAAC...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCCATCCACTGGACAGTaGGTTTGGGGTTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPPSTGQ*VWGFHW
Trigger: CCAATGGAAACCCCAAACCCACTGTCCAGTGGATGG...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAGGTAGCCATGCTCGTTaGAGGTGTTGCACTGGTACA +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRGSHAR*RCCTGT
Trigger: TGTACCAGTGCAACACCTCCAACGAGCATGGCTACC...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGCCGTGGTGCCCCTTCTaGCCACCTGGTCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQPWCPF*PPGPRA
Trigger: TGCCCGAGGACCAGGTGGCCAGAAGGGGCACCACGG...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAGCCTTGGCCAGGTCTTaGTCTAGCTCGGTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQALARS*SSSVLA
Trigger: CGCCAGCACCGAGCTAGACCAAGACCTGGCCAAGGC...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGGCCTTGGCCAGGTCTTaGTCTAGCTCGGTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASALARS*SSSVLA
Trigger: CGCCAGCACCGAGCTAGACCAAGACCTGGCCAAGGC...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTGGTCTGGCCGTCCTTTaGGCAGGGCAGCCAAACGGT +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVGLAVL*AGQPNG
Trigger: ACCGTTTGGCTGCCCTGCCCAAAGGACGGCCAGACC...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTGCTCGGATGGGAGGCTaGGGTGGCTGCTCCCAACCT +
Preference number: 4 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSARMGG*GGCSQP
Trigger: AGGTTGGGAGCAGCCACCCCAGCCTCCCATCCGAGC...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGGACTCTCCGTGGTGGTaGTGGCGGCAGCAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASDSPWW*WRQQWL
Trigger: CAACCACTGCTGCCGCCACCACCACCACGGAGAGTC...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGTGTCCGCTTGGTTGTTaGTGTAAGCTGTACTGGTCA +
Preference number: 4 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVCPLGC*CKLYWS
Trigger: TGACCAGTACAGCTTACACCAACAACCAAGCGGACA...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCAGCCATCCTCTTCCTTaGGGTCTTCAGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: ERLKSEAVPMAADPFLGISHPLP*GLQGQG
Trigger: CCCTTGGCCCTGAAGACCCCAAGGAAGAGGATGGCT...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCTTTTTGACCGTGTACTaGCCGATGAAGGAGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTFLTVY*PMKEPS
Trigger: AGACGGCTCCTTCATCGGCCAGTACACGGTCAAAAA...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAAGTGGTGGCTGTGCCTaGGTGGGCTCCGTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQSGGCA*VGSVRP
Trigger: TGGCCTAACGGAGCCCACCCAGGCACAGCCACCACT...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TTCCAGGTTGATTGTCTCCAGGTTGGGCTGCCGGACTCGGAAACGCCTAGGGGCTGGCTTGGTGGCTACTaGTCCTCACAGCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: FQVDCLQVGLPDSETPRGWLGGY*SSQLGR
Trigger: TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA...GCCCCTAGGCGTTTCCGAGTCCGGCAGCCCAACCTGGAGACAATCAACCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAGGGGGCTTGTGGGTaGCTTGGTGGCTACTGGTCC +
Preference number: 4 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTEGACG*LGGYWS
Trigger: GGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTC...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGCTACGTGTTCTGGTATaGATTCAATCCTTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQLRVLV*IQSFLP
Trigger: AGGCAAAAAGGATTGAATCCATACCAGAACACGTAG...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGCCTGTCTACGTGTTCTaGTATGGATTCAATCCTTTT +
Preference number: 4 (lower is better)
Translates to: ADSVVERSGWLRDRARGQPVYVF*YGFNPF
Trigger: AAAAGGATTGAATCCATACCAGAACACGTAGACAGG...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCTGATTTTCTTCTGCTaGAGGTACACAGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVLIFFC*RYTVTG
Trigger: GCCAGTGACTGTGTACCTCCAGCAGAAGAAAATCAG...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGCTACTCTGGACAGGGTaGGTGTGGCCCTCTATCTAC +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVLLWTG*VWPSIY
Trigger: GTAGATAGAGGGCCACACCCACCCTGTCCAGAGTAG...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGCTACTCTGGACAGGGTaGGTGTGGCCCTCTATCTAC +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVLLWTG*VWPSIY
Trigger: GTAGATAGAGGGCCACACCCACCCTGTCCAGAGTAG...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGTGGGCCCTGGCCACGTaGACAGGTGCCCTCTACTCT +
Preference number: 4 (lower is better)
Translates to: LADPHIVPLLLKVVVASWWALAT*TGALYS
Trigger: AGAGTAGAGGGCACCTGTCCACGTGGCCAGGGCCCA...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGGCCCTGGCCACGTaGACAGGTGCCCTCTACTCT +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASWALAT*TGALYS
Trigger: AGAGTAGAGGGCACCTGTCCACGTGGCCAGGGCCCA...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTCCATCTCCTCGAGGGTaGCAGCATGGGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFPSPRG*QHGPWP
Trigger: TGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGG...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATGGAGATAGACGTTGCTaGAGGCTTCAAGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: GLVGGLVATGPHSLADPHGDRRC*RLQGLQ
Trigger: CTGCAAGCCTTGAAGCCTCCAGCAACGTCTATCTCC...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTTGAGTGGCCACTTCTaGTCCTGCCGGAACACTTGC +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVLSGHF*SCRNTC
Trigger: GCAAGTGTTCCGGCAGGACCAGAAGTGGCCACTCAA...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGGGAAGGACAGAGCCCTaGTCTGGCCCAGGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWGRTEP*SGPGPL
Trigger: CAGGGGGCCTGGGCCAGACCAGGGCTCTGTCCTTCC...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGTTATTGGCTCAGTTCTaGGCTATGGTTTCTTACCAG +
Preference number: 4 (lower is better)
Translates to: PRADSVVERSGWLRDRARLLAQF*AMVSYQ
Trigger: CTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAA...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAATTCAAACAACCTTATTaGCTCAGTTCTGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: GQGRTVWWNARGGCETGQFKQPY*LSSGLW
Trigger: CCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGAAGCCTGGCAGGACACTaGAACGAGGTGCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRSLAGH*NEVQRQ
Trigger: CTGCCTCTGCACCTCGTTCCAGTGTCCTGCCAGGCT...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACGGACAGTACAGAGCCTaGCAGGACACTGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHGQYRA*QDTGTR
Trigger: CCTCGTTCCAGTGTCCTGCCAGGCTCTGTACTGTCC...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTACTTCCCGAACCCTaGCCTCGACAATCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVVLPEP*PRQSFR
Trigger: CCTGAAGGATTGTCGAGGCCAGGGTTCGGGAAGTAC...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCTGTCCCCTGACCGATaGCAGTGTACTTCCCGAACC +
Preference number: 4 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHLSPDR*QCTSRT
Trigger: GGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAG...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACGCAGGGGCAATGGGGTaGACCAGATGTCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHAGAMG*TRCLQP
Trigger: AGGTTGGAGACATCTGGTCCACCCCATTGCCCCTGC...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCGACAGCCACAAAGTCTaGCTTGGACTCACATGGGGT +
Preference number: 4 (lower is better)
Translates to: LNSSPANPRVAACMGPAADSHKV*LGLTWG
Trigger: ACCCCATGTGAGTCCAAGCCAGACTTTGTGGCTGTC...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CAACAGGGTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTGGGTGTGACACTTCCCTGGGCTTaGGCTGTGCAGGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: QQGCGLLYVCEHAWALGVTLPWA*AVQAGD
Trigger: GTCCCCAGCCTGCACAGCCCAAGCCCAGGGAAGTGT...CACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCACAACCCTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGTGGCAGCTTGCATaGGCCCTGCTGCCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFGWQLA*ALLPLC
Trigger: GCAGAGAGGCAGCAGGGCCCATGCAAGCTGCCACCC...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGAGCATGGGTCGGGAGTaGGAGCAGGACAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEESMGRE*EQDRRW
Trigger: CCACCTTCTGTCCTGCTCCCACTCCCGACCCATGCT...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAAACAAATTGGAATGGTaGGGGATATGGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: AELSHGSSSPTLVAPGAENKLEW*GIWVCG
Trigger: ACCACACACCCATATCCCCCACCATTCCAATTTGTT...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACTTAGACGGCCCTCCATaGCCCAGAAGTCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHLDGPP*PRSLPC
Trigger: GCAGGGAAGACTTCTGGGCCATGGAGGGCCGTCTAA...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGTCGCTGACTGCTTGGTaGTGGTTGGCGGCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: LADPHIVPLLLKVVVASWSLTAW*WLAAAS
Trigger: TGACGCAGCCGCCAACCATCACCAAGCAGTCAGCGA...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGGATGTGATCCTTCGCTaGCTGCTTGGTGATGGTTGG +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVDVILR*LLGDGW
Trigger: CCAACCATCACCAAGCAGTCAGCGAAGGATCACATC...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTCGGGGGTCCACGATGTaGTCCTTCGCTGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVRGSTM*SFADCL
Trigger: CAAGCAGTCAGCGAAGGATCACATCGTGGACCCCCG...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCCGGGGGTCCACGATGTaGTCCTTCGCTGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGRGSTM*SFADCL
Trigger: CAAGCAGTCAGCGAAGGATCACATCGTGGACCCCCG...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATGGTCCTTGGCGATGTTaGAGAATCTGCTGTTTCGTG +
Preference number: 4 (lower is better)
Translates to: GLVGGLVATGPHSLADPHGPWRC*RICCFV
Trigger: CACGAAACAGCAGATTCTTCAACATCGCCAAGGACC...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTGGTCCTTGGCGATGTTaGAGAATCTGCTGTTTCGTG +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPGPWRC*RICCFV
Trigger: CACGAAACAGCAGATTCTTCAACATCGCCAAGGACC...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGCACGTTTGTCTTGGGTaGTGGGCTCCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVHVCLG*WAPWSC
Trigger: GCAGCTCCATGGAGCCCATCACCCAAGACAAACGTG...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTCACGTTTGTCTTGGGTaGTGGGCTCCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLHVCLG*WAPWSC
Trigger: GCAGCTCCATGGAGCCCATCACCCAAGACAAACGTG...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCGTTATGGCCCTaGGAGACACGTTTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVSPLWP*ETRLSW
Trigger: CCAAGACAAACGTGTCTCTCAGGGCCATAACGGAGA...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp CAAGGTGGGAGGCAGCTGTCCCCTGACCGATGGCAGTGTACTTCCCGAACCCTGTGCCCTGGGGATACATaGAGCTTGGTGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QGGRQLSPDRWQCTSRTLCPGDT*SLVFFL
Trigger: CAGAAAGAACACCAAGCTTCATGTATCCCCAGGGCA...CAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTCCCACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGATGCCCTGGGGATACATaGAGCTTGGTGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRCPGDT*SLVFFL
Trigger: CAGAAAGAACACCAAGCTTCATGTATCCCCAGGGCA...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGAAAGAATCACTCGAATaGGCTGGTTCCGGGGCGACA +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVKESLE*AGSGAT
Trigger: TGTCGCCCCGGAACCAGCTCATTCGAGTGATTCTTT...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGTCCTGGTGGGGTCTTTaGCCTCCAGGCGGACTTGGT +
Preference number: 4 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMSWWGL*PPGGLG
Trigger: ACCAAGTCCGCCTGGAGGTCAAAGACCCCACCAGGA...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAATCCTGGTGGGGTCTTTaGCCTCCAGGCGGACTTGGT +
Preference number: 4 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQSWWGL*PPGGLG
Trigger: ACCAAGTCCGCCTGGAGGTCAAAGACCCCACCAGGA...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGGATCAGCTAGCACGGTaGGGTAGGCCTTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LADPHIVPLLLKVVVASWDQLAR*GRPWPG
Trigger: ACCTGGCCAAGGCCTACCTCACCGTGCTAGCTGATC...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGCTCTCCGCCTCCACTTaGCAATGTAGCGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVLSAST*QCSAGW
Trigger: CCAACCTGCGCTACATTGTCAAGTGGAGGCGGAGAG...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTGAGAGCCCCACACTGTaGCGTTGTTCCAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVESPTL*RCSRPL
Trigger: GAGAGGCCTGGAACAACGTCACAGTGTGGGGCTCTC...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCACCGTGAACTTGGTCTaGTTGGGAGAGAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTTVNLV*LGEKFS
Trigger: GGAAAACTTCTCTCCCAATCAGACCAAGTTCACGGT...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGATTCGGGGGTGCTGGTaGCTCCTCTGTGACGGCTTC +
Preference number: 4 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMIRGCW*LLCDGF
Trigger: GAAGCCGTCACAGAGGAGTCACCAGCACCCCCGAAT...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTCCGTCCAGAGATGTCTaGCTGCCCTGCAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFPSRDV*LPCRGL
Trigger: CAAGCCCCTGCAGGGCAGTCAGACATCTCTGGACGG...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTCCGTCCAGAGATGTCTaGCTGCCCTGCAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGPSRDV*LPCRGL
Trigger: CAAGCCCCTGCAGGGCAGTCAGACATCTCTGGACGG...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGAGGAGCCGTCTTCATTaGACTGACCCTCGCCACCCT +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSERSRLH*TDPRHP
Trigger: AGGGTGGCGAGGGTCAGTTCAATGAAGACGGCTCCT...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAAGGAGCCGTCTTCATTaGACTGACCCTCGCCACCCT +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIRSRLH*TDPRHP
Trigger: AGGGTGGCGAGGGTCAGTTCAATGAAGACGGCTCCT...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACACAGTCACTGGCGTTaGAGTCCTTTCTATCAGTGC +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRHSHWR*SPFYQC
Trigger: GCACTGATAGAAAGGACTTCAACGCCAGTGACTGTG...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAAATTGGCTGAGAAGATaGTATCTGCTAGAGATGGAA +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRNWLRR*YLLEME
Trigger: TTCCATCTCTAGCAGATATCATCTTCTCAGCCAATT...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGGTGAGGACGTGTGTTaGGTGGCCACTTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIGEDVC*VATSGP
Trigger: AGGACCAGAAGTGGCCACTCAACACACGTCCTCACC...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGCAGCACCTTCGGTCTaGGAACTGCAGGTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMAAPSV*ELQVCE
Trigger: CTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGC...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCACAGGCACACTTCCCTaGCATTCCCTTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: ERLKSEAVPMAADPFLGITGTLP*HSLQGQ
Trigger: CTGTCCCTGAAGGGAATGTCAGGGAAGTGTGCCTGT...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCTATGGAATGAGTGTCTaGGAAACTGACTACTCTGCT +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALYGMSV*ETDYSA
Trigger: AGCAGAGTAGTCAGTTTCTCAGACACTCATTCCATA...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CAACAGGGTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTGGGTGTGGGACTGTCAGCCCCATaGGGGCAGGGACCACATCTA +
Preference number: 4 (lower is better)
Translates to: QQGCGLLYVCEHAWALGVGLSAP*GQGPHL
Trigger: TAGATGTGGTCCCTGCCCTCATGGGGCTGACAGTCC...CACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCACAACCCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGGGACTGTCAGCCCCATaGGGGCAGGGACCACATCTA +
Preference number: 4 (lower is better)
Translates to: LADPHIVPLLLKVVVASWGLSAP*GQGPHL
Trigger: TAGATGTGGTCCCTGCCCTCATGGGGCTGACAGTCC...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGCTGCCCTTAATTGCATaGCTGGGTGAACCACACACA +
Preference number: 4 (lower is better)
Translates to: MVKGGHWSDSARLAYASQLPLIA*LGEPHT
Trigger: TGTGTGTGGTTCACCCAGTCATGCAATTAAGGGCAG...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCAGATGCCCTCACTTCTaGGGAATACAGCACACTGAA +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTRCPHF*GIQHTE
Trigger: TTCAGTGTGCTGTATTCCTCAGAAGTGAGGGCATCT...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAATACGCATCTGTCACTaGCAAAGTTGGTTAATGCAA +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRIRICH*QSWLMQ
Trigger: TTGCATTAACCAACTTTGTCAGTGACAGATGCGTAT...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGGCTCTGTTCCAGGCTaGGGAGGGAAGGTAAACTCC +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEGSVPG*GGKVNS
Trigger: GGAGTTTACCTTCCCTCCGCAGCCTGGAACAGAGCC...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTAGCACTCAGCTTCTCTaGCTCATTCAGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPSTQLL*LIQPLP
Trigger: AGGAAGAGGCTGAATGAGGCAGAGAAGCTGAGTGCT...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp GCAGGACACTGGAACGAGGTGCAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAGGGAGATTTAGACACCTaGAGGCGGATCCTATTGGAC +
Preference number: 4 (lower is better)
Translates to: AGHWNEVQRQAAGLLLPKGDLDT*RRILLD
Trigger: GTCCAATAGGATCCGCCTGCAGGTGTCTAAATCTCC...CTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGAAGCACCATCTGGCTaGTCGCGGTGCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGEAPSG*SRCPGD
Trigger: ATCCCCAGGGCACCGCGAGCAGCCAGATGGTGCTTC...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACCAGCAGGAGGTCCATaGCACGAAGCACCATCTGGC +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQPAGGP*HEAPSG
Trigger: GCCAGATGGTGCTTCGTGGCATGGACCTCCTGCTGG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TGTGACGGCTTCCCCAGAGCCCACCTGCGTCCTGGCGCTGAGGGTAAAGCGGTAACCTTTCTTGTACCATaGGATGTCTGGTGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: CDGFPRAHLRPGAEGKAVTFLVP*DVWCWD
Trigger: GTCCCAACACCAGACATCGCATGGTACAAGAAAGGT...TACCGCTTTACCCTCAGCGCCAGGACGCAGGTGGGCTCTGGGGAAGCCGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR GCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGATCGTGTGCCGGATGCTaGCCATCTTGTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRSCAGC*PSCWRP
Trigger: TGGCCTCCAACAAGATGGGCAGCATCCGGCACACGA...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTTCGTGTGCCGGATGCTaGCCATCTTGTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLSCAGC*PSCWRP
Trigger: TGGCCTCCAACAAGATGGGCAGCATCCGGCACACGA...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGCTCGTTGGAGGTGTTaGACTGGTACACAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIARWRC*TGTQPC
Trigger: GCAGGGCTGTGTACCAGTGCAACACCTCCAACGAGC...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGCTCGTTGGAGGTGTTaGACTGGTACACAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLARWRC*TGTQPC
Trigger: GCAGGGCTGTGTACCAGTGCAACACCTCCAACGAGC...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGCATAAACATGGTAGTTaGCACCATCCAGGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWHKHGS*HHPGCF
Trigger: GAAGCAACCTGGATGGTGGCAACTACCATGTTTATG...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCGACACAGGTGTAGATaGCCTGGTCCTCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHRHRCR*PGPLCG
Trigger: TCCGCAAAGAGGACCAGGGCATCTACACCTGTGTCG...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCTTGGTTTTCAGCTTTaGCCAGGATGTTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPLGFQL*PGCWWR
Trigger: TCGCCACCAACATCCTGGGCAAAGCTGAAAACCAAG...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp AGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTGCTCTACCCGACACTCCAGCTaGACCGTGGTGCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RLRKQDCFSSHTVVLDCSTRHSS*TVVPLL
Trigger: CAGAAGGGGCACCACGGTGCAGCTGGAGTGTCGGGT...AGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCTTCAGGGAGGGGTCGTaGTTCACCCGACACTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGFREGS*FTRHSS
Trigger: GCTGGAGTGTCGGGTGAAGCACGACCCCTCCCTGAA...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCCGACACACGTGTAACTaGCCTGGTCCCGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRRHTCN*PGPALP
Trigger: TGGCAGAGCGGGACCAGGGCAGTTACACGTGTGTCG...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGCTGTCGTCACTCTCCTaGTGCTTGATGGTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEELSSLS*CLMVPS
Trigger: GGACGGCACCATCAAGCAGCAGGAGAGTGACGACAG...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGACTGTCGTCACTCTCCTaGTGCTTGATGGTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRLSSLS*CLMVPS
Trigger: GGACGGCACCATCAAGCAGCAGGAGAGTGACGACAG...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CCCACAGAACAGCAGCCTGAGAGAGGGCTAACAGCATTTTCTTCATACACAAAGAACGCTCGGGGTGGCTaGGAGACCGGGCAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PTEQQPERGLTAFSSYTKNARGG*ETGQGA
Trigger: GGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTT...CTTTGTGTATGAAGAAAATGCTGTTAGCCCTCTCTCAGGCTGCTGTTCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTGAAAAGGTGAGCGTGTaGCGAGGCCAAGGGCGGACA +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVEKVSV*RGQGRT
Trigger: TGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTC...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR GCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAAAGCAGCAAGGAGGCCTaGGCACCTTCTCCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQSSKEA*APSPCQ
Trigger: TTGGCAGGGAGAAGGTGCGCAGGCCTCCTTGCTGCT...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGACGTCTTCAGAGTCAATaGAGCTCACATCTTAGATAT +
Preference number: 4 (lower is better)
Translates to: RVPRPRADSVVERSGWLRRLQSQ*SSHLRY
Trigger: ATATCTAAGATGTGAGCTGCATTGACTCTGAAGACG...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGGGGAGCAGTGCCTTATaGCCCAAACACACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVGSSAL*PKHTSK
Trigger: TTTGCTGGTGTGTTTGGGGCATAAGGCACTGCTCCC...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTTGCATAGGCTGCCCTaGTCTCCTGGAGATAGACGT +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVLHRLP*SPGDRR
Trigger: ACGTCTATCTCCAGGAGAGCAGGGCAGCCTATGCAA...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGGCCACTTCTGGTCCTaGCGGAACACTTGCATAGGC +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEGHFWS*RNTCIG
Trigger: GCCTATGCAAGTGTTCCGGCAGGACCAGAAGTGGCC...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGAGTGGTGTGGCAGACTTaGTCATCGTCCCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRVVWQT*SSSLPA
Trigger: GGCAGGAAGGGACGATGAGCAAGTCTGCCACACCAC...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGCCTAAGACTTGGCCCTaGTCCAGCACAGGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: TKSIESSLGGGITTLSTVPKTWP*SSTGRQ
Trigger: CTGGCGCCCTGTGCTGGAGCAGGGCCAAGTCTTAGG...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAAGACAGACAAAAATGTaGTATGTCCCTGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTRQTKM*YVPAPS
Trigger: GGAGGGAGCAGGGACATAGCACATTTTTGTCTGTCT...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGGGTGGGGCTGGTCAGTaGCAGGGTGAGCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQGGAGQ*QGEHGQ
Trigger: CTGCCCATGCTCACCCTGGCACTGACCAGCCCCACC...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGCACTGCCCTCGGAACTaGCCCGGGCCACTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQHCPRN*PGPLLL
Trigger: GAGAAGCAGTGGCCCGGGGCAGTTCCGAGGGCAGTG...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCCTCGGGCTCCGGCCCTaGGCGCTGTCCGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPLGLRP*ALSELS
Trigger: GGACAGCTCGGACAGCGCCCAGGGCCGGAGCCCGAG...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339876.11
CDS-3UTR CCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTTCGAGCCGCTTTAACTaGGCCTCCTGGACAGCACTC +
Preference number: 4 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPSSRFN*ASWTAL
Trigger: GAGTGCTGTCCAGGAGGCCCAGTTAAAGCGGCTCGA...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTGTCCAGTGGAAGCTaGGGGCAGGGTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLVSSGS*GQGSLL
Trigger: CAAAAGGGAACCCTGCCCCCAGCTTCCACTGGACAC...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGACTGTTTCGTGTCCAGTaGAAGCTGGGGGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRLFRVQ*KLGAGF
Trigger: GAACCCTGCCCCCAGCTTCCACTGGACACGAAACAG...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTAAAGGAGCGCCCTCTTaGACCACGACAGGGTCTAGG +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLKGAPS*TTTGSR
Trigger: CCTAGACCCTGTCGTGGTCCAAGAGGGCGCTCCTTT...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGAAAGGAGCGCCCTCTTaGACCACGACAGGGTCTAGG +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVKGAPS*TTTGSR
Trigger: CCTAGACCCTGTCGTGGTCCAAGAGGGCGCTCCTTT...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCCTGCAGCATCACGTTaGAGAAGTATAGGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPPAASR*RSIGLR
Trigger: ACGGAGACCTATACTTCTCCAACGTGATGCTGCAGG...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTTGCTGCCCATCTTGTTaGAGGCCAGGCAGAAATACT +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPCCPSC*RPGRNT
Trigger: AGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCA...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGCCATCCACTGGACAGTaGGTTTGGGGTTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVPSTGQ*VWGFHW
Trigger: CCAATGGAAACCCCAAACCCACTGTCCAGTGGATGG...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGGCCACCTCACGGTTTaGGTTAGGTGGTGCCGATTG +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEGHLTV*VRWCRL
Trigger: CAATCGGCACCACCTAACCCAAACCGTGAGGTGGCC...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGCCCTGCTGCTGATCTaGGTGTCCCGGAAGATGATG +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLALLLI*VSRKMM
Trigger: CATCATCTTCCGGGACACCCAGATCAGCAGCAGGGC...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCTTGGAGGTGTTGCACTaGTACACAGCCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ERLKSEAVPMAADPFLGILEVLH*YTALLL
Trigger: CAGCAGCAGGGCTGTGTACCAGTGCAACACCTCCAA...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCATCACTCGAATGAGCTaGTTCCGGGGCGACAGCATC +
Preference number: 4 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIITRMS*FRGDSI
Trigger: GATGCTGTCGCCCCGGAACCAGCTCATTCGAGTGAT...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTATCGCAGTGTGGGGATaGGAGACCCAAAGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPIAVWG*ETQRKG
Trigger: GCCCTTTCTTTGGGTCTCCCATCCCCACACTGCGAT...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGACTCCAGCTGCACCGTaGTGCCCCTTCTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: TKSIESSLGGGITTLSTVTPAAP*CPFWPP
Trigger: AGGTGGCCAGAAGGGGCACCACGGTGCAGCTGGAGT...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGGGTCTAGCTCGGTGCTaGCGACACACGTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEEGLARC*RHTCNC
Trigger: GCAGTTACACGTGTGTCGCCAGCACCGAGCTAGACC...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TCGGACTTTAACTTCAGTGGGCGCAGCCCTGGGATAATCTTCTCCGGAGTAACCGCCTTGGCCAGGTCTTaGTCTAGCTCGGTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: SDFNFSGRSPGIIFSGVTALARS*SSSVLA
Trigger: CGCCAGCACCGAGCTAGACCAAGACCTGGCCAAGGC...GGTTACTCCGGAGAAGATTATCCCAGGGCTGCGCCCACTGAAGTTAAAGTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTGGTCTGGCCGTCCTTTaGGCAGGGCAGCCAAACGGT +
Preference number: 4 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSGLAVL*AGQPNG
Trigger: ACCGTTTGGCTGCCCTGCCCAAAGGACGGCCAGACC...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
CDS-3UTR CCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCGTCCCGGGGCCGGTCTaGCCGTCCTTTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPVPGPV*PSFGQG
Trigger: GCCCTGCCCAAAGGACGGCCAGACCGGCCCCGGGAC...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAACCCCAGGTTGGAACTaGTCTTCTTCAAACTGGACG +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRTPGWN*SSSNWT
Trigger: CGTCCAGTTTGAAGAAGACCAGTTCCAACCTGGGGT...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTCAATGTAGCGCAGGTTaGGGCCAAAGGCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTQCSAG*GQRPRW
Trigger: CCACCTCGGCCTTTGGCCCCAACCTGCGCTACATTG...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACAATGTAGCGCAGGTTaGGGCCAAAGGCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQQCSAG*GQRPRW
Trigger: CCACCTCGGCCTTTGGCCCCAACCTGCGCTACATTG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAAACCGATGACGGACTCTaGCTCAGGGCCCTTCCCGAA +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQTDDGL*LRALPE
Trigger: TTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATCGGT...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGACCGATGACGGACTCTaGCTCAGGGCCCTTCCCGAA +
Preference number: 4 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMTDDGL*LRALPE
Trigger: TTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATCGGT...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTTGGGAGGACTCTCCGTaGTGGTGGTGGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLWEDSP*WWWRQQ
Trigger: CTGCTGCCGCCACCACCACCACGGAGAGTCCTCCCA...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGCCAATGAACCAGCCCTaGGTGGCGATGTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: LADPHIVPLLLKVVVASWPMNQP*VAMSAW
Trigger: CCAAGCGGACATCGCCACCCAGGGCTGGTTCATTGG...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTCCAATGAACCAGCCCTaGGTGGCGATGTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVPMNQP*VAMSAW
Trigger: CCAAGCGGACATCGCCACCCAGGGCTGGTTCATTGG...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGTGGCTGTGCCTGGGTaGGCTCCGTTAGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGVAVPG*APLGQR
Trigger: TCTCTGGCCTAACGGAGCCCACCCAGGCACAGCCAC...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTAGTGGTGGCTGTGCCTaGGTGGGCTCCGTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGSGGCA*VGSVRP
Trigger: TGGCCTAACGGAGCCCACCCAGGCACAGCCACCACT...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGTAGGTCTGCAGTaGTTTTGTCTCCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVVVGLQ*FCLPFS
Trigger: GGAGAAGGGGAGACAAAACCACTGCAGACCTACCAC...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCTTGTGGGTGGCTTaGTGGCTACTGGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPGLWVA*WLLVLT
Trigger: TGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCC...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp AGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTGCTCTGAGGGGGCTTGTGGGTaGCTTGGTGGCTACTGGTCC +
Preference number: 4 (lower is better)
Translates to: RLRKQDCFSSHTVVLDCSEGACG*LGGYWS
Trigger: GGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTC...AGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CTTGCTGTCTCTTCTGAGACACCCACAGGTTCTTCAGCAAGCTGCTCTCCCTCCTTGGGAGGGGGCTTGTaGGTGGCTTGGTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: LAVSSETPTGSSASCSPSLGGGL*VAWWLL
Trigger: CAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAA...GGAGGGAGAGCAGCTTGCTGAAGAACCTGTGGGTGTCTCAGAAGAGACAGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTCTACTCTGGACAGGGTaGGTGTGGCCCTCTATCTAC +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPLLWTG*VWPSIY
Trigger: GTAGATAGAGGGCCACACCCACCCTGTCCAGAGTAG...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCTTGAGTGGCCACTTCTaGTCCTGCCGGAACACTTGC +
Preference number: 4 (lower is better)
Translates to: ERLKSEAVPMAADPFLGILSGHF*SCRNTC
Trigger: GCAAGTGTTCCGGCAGGACCAGAAGTGGCCACTCAA...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCCAGCTGATCCATTCCTaGGGATCAGCTTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTQLIHS*GSASPS
Trigger: GGAGGGTGAAGCTGATCCCCAGGAATGGATCAGCTG...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAACGGAGGCTGTGCCCATaGCAGCTGATCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQRRLCP*QLIHSW
Trigger: CCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCG...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACGGAGGCTGTGCCCATaGCAGCTGATCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQRRLCP*QLIHSW
Trigger: CCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCTTATTGGCTCAGTTCTaGGCTATGGTTTCTTACCAG +
Preference number: 4 (lower is better)
Translates to: SISSRVAAWALATWTGALLLAQF*AMVSYQ
Trigger: CTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAA...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGAGCCTGGCAGGACACTaGAACGAGGTGCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMSLAGH*NEVQRQ
Trigger: CTGCCTCTGCACCTCGTTCCAGTGTCCTGCCAGGCT...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGAGACTGGAGCGCCGATaGCATGGTGCTGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LADPHIVPLLLKVVVASWRLERR*HGAVLA
Trigger: AGCCAGGACAGCACCATGCCATCGGCGCTCCAGTCT...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACACAAAGGAGGGTGCTaGTTTGGCTTTCCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRHKGGC*FGFPVS
Trigger: GCTAACAGGAAAGCCAAACCAGCACCCTCCTTTGTG...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCATGCAACCGCAACCATaGGCTTTTGTGTGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTMQPQP*AFVCLA
Trigger: AGCCAAACACACAAAAGCCCATGGTTGCGGTTGCAT...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCTGTGGCTCTCCTGGATaGTTCTCCTTTCTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTCGSPG*FSFLSD
Trigger: ATCAGAGAGAAAGGAGAACCATCCAGGAGAGCCACA...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCATTTTGGGAGGCATGTaGGGGATGTGGGAGACGCAG +
Preference number: 4 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTILGGM*GMWETQ
Trigger: CTGCGTCTCCCACATCCCCCACATGCCTCCCAAAAT...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTCTCAGTCTCCCTCCATaGGGACAGGTGGGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTLSLPP*GQVGRE
Trigger: TTCCCTCCCCACCTGTCCCCATGGAGGGAGACTGAG...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404076.5
CDS-3UTR CCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGGGGGGCATCGCAGTGTaGGGATGGGAGACCCAAAGA +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASGGIAV*GWETQR
Trigger: TCTTTGGGTCTCCCATCCCCACACTGCGATGCCCCC...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR CAA 72 bp GAGCGCCGATGGCATGGTGCTGTCCTGGCTTCACTGTaGGTATGTCTTGGGGTAGTTGCTTGGGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: ERRWHGAVLASL*VCLGVVAWETQ
Trigger: CTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCATCGGCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 72 bp ACACCGTGGTTCTTGACTGCTCTGTCCCGCCCAGCCTaGGTGACCAGATGGACCAAGCTCTCCCTCAGAATC +
Preference number: 4 (lower is better)
Translates to: TPWFLTALSRPA*VTRWTKLSLRI
Trigger: GATTCTGAGGGAGAGCTTGGTCCATCTGGTCACCAAGGCTGGGCGGGACAGAGCAGTCAAGAACCACGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 72 bp GGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTaGACTGCTCTGTCCCGCCCAGCCTTGGTGACCAGA +
Preference number: 4 (lower is better)
Translates to: GSRTVSQATPWF*TALSRPALVTR
Trigger: TCTGGTCACCAAGGCTGGGCGGGACAGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
CDS-3UTR TCA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTTCGCTGACTGCTTGGTaGTGGTTGGCGGCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSSLTAW*WLAAAS
Trigger: TGACGCAGCCGCCAACCATCACCAAGCAGTCAGCGA...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGCGGGGGTCCACGATGTaGTCCTTCGCTGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKRGSTM*SFADCL
Trigger: CAAGCAGTCAGCGAAGGATCACATCGTGGACCCCCG...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCTTGCGGGCGAAGCACTaGTATTCCCCCTCATATTCC +
Preference number: 4 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTLRAKH*YSPSYS
Trigger: GGAATATGAGGGGGAATATCAGTGCTTCGCCCGCAA...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCTTGCGGGCGAAGCACTaGTATTCCCCCTCATATTCC +
Preference number: 4 (lower is better)
Translates to: ERLKSEAVPMAADPFLGILRAKH*YSPSYS
Trigger: GGAATATGAGGGGGAATATCAGTGCTTCGCCCGCAA...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp GATGACGGACTCTGGCTCAGGGCCCTTCCCGAAGTCATTTTCAGCCTGGACTCGTCTCCGTTATGGCCCTaGGAGACACGTTTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: DDGLWLRALPEVIFSLDSSPLWP*ETRLSW
Trigger: CCAAGACAAACGTGTCTCTCAGGGCCATAACGGAGA...CGAGTCCAGGCTGAAAATGACTTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR TCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGGCTGGATGGTGTGGGTaGAGTGGAAGCGGGCGTTAC +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKAGWCG*SGSGRY
Trigger: GTAACGCCCGCTTCCACTTCACCCACACCATCCAGC...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGGCTGGATGGTGTGGGTaGAGTGGAAGCGGGCGTTAC +
Preference number: 4 (lower is better)
Translates to: TKSIESSLGGGITTLSTVAGWCG*SGSGRY
Trigger: GTAACGCCCGCTTCCACTTCACCCACACCATCCAGC...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGGGGTGTCCCGGAAGATaGTGGTGTCTCCGGCCACCT +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKGCPGR*WCLRPP
Trigger: AGGTGGCCGGAGACACCATCATCTTCCGGGACACCC...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGGGGTGTCCCGGAAGATaGTGGTGTCTCCGGCCACCT +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQGCPGR*WCLRPP
Trigger: AGGTGGCCGGAGACACCATCATCTTCCGGGACACCC...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGGCACATCCAGCACACTaGCAAAGGCGTTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASAHPAH*QRRWPA
Trigger: TGCTGGCCAACGCCTTTGTCAGTGTGCTGGATGTGC...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GCTCTGCCACCCCAAAGATGGTCAGGGAGTCGTCTTCCTTCTTCATCCTGTTTCTCCTGGTGGGGTCTTTaGCCTCCAGGCGGACTTGGT +
Preference number: 4 (lower is better)
Translates to: ALPPQRWSGSRLPSSSCFSWWGL*PPGGLG
Trigger: ACCAAGTCCGCCTGGAGGTCAAAGACCCCACCAGGA...GAAACAGGATGAAGAAGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR TCA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTCAGCCAGGAGACGGTaGGTTTCAGGGAGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTSARRR*VSGRGR
Trigger: ACGACCCCTCCCTGAAACTCACCGTCTCCTGGCTGA...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp AGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTGCTCTGATCAGCTAGCACGGTaGGGTAGGCCTTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RLRKQDCFSSHTVVLDCSDQLAR*GRPWPG
Trigger: ACCTGGCCAAGGCCTACCTCACCGTGCTAGCTGATC...AGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGTTAGTTGGAGTGGCCTaGTCAGCTAGCACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEELVGVA*SASTVR
Trigger: CCTCACCGTGCTAGCTGATCAGGCCACTCCAACTAA...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
CDS-3UTR TCA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTCTCCGGAGTAACCGATaGCGGACTCTGGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTLRSNR*RTLAQG
Trigger: GCCCTGAGCCAGAGTCCGTCATCGGTTACTCCGGAG...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTGATCCCATTCCAGGTTaGTTGTCTCCAGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPDPIPG*LSPGWA
Trigger: AGCCCAACCTGGAGACAATCAACCTGGAATGGGATC...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCGAGTGTATCCAATCATaGTCCCATTTGGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTECIQS*SHLDAQ
Trigger: CTGAGCATCCAAATGGGATCATGATTGGATACACTC...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCCCGTTCTTTGCACCGTaGACTTGGTCTGATTGGGAG +
Preference number: 4 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTPFFAP*TWSDWE
Trigger: CTCCCAATCAGACCAAGTTCACGGTGCAAAGAACGG...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGTGCGACAGTTGGGATaGTGGGGACTGTTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIVRQLG*WGLLWL
Trigger: AAGCCACAACAGTCCCCATCATCCCAACTGTCGCAC...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGGAGACCCAGCTGGTCAGCTGTATAGGCTaGGCCTGGGCCTTAACTGGG +
Preference number: 4 (lower is better)
Translates to: VLASLLVCLGVVAWETQLVSCIG*AWALTG
Trigger: CCCAGTTAAGGCCCAGGCTCAGCCTATACAGCTGAC...CAGCTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCTCGTACCCTTGTTACTaGAGGTGGTGGTGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTSYPCY*RWWWLR
Trigger: ACGAAGCCACCACCACCTTCAGTAACAAGGGTACGA...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGCAGGCTCCCTCCAGCTaGGCTCAGCCACGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLQAPSS*AQPRLQ
Trigger: CTGGAGCCGTGGCTGAGCTCAGCTGGAGGGAGCCTG...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTCCTGGGTTTCACCAGTaGGGAGGCATGAAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPPGFHQ*GGMKSK
Trigger: TTTGGACTTCATGCCTCCTCACTGGTGAAACCCAGG...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGATGTATACACCCCAATaGAAGGGCAGACCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVMYTPQ*KGRPAQ
Trigger: CTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACAT...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGGGGGCATCACAACACTaGGTACGGTGCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: TKSIESSLGGGITTLSTVGASQH*VRCHLR
Trigger: CCTGAGGTGGCACCGTACTCAGTGTTGTGATGCCCC...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTCTCCATTTGGGGTaGCTGGTGAGGACGTGTGTT +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPCLHLG*LVRTCV
Trigger: AACACACGTCCTCACCAGTCACCCCAAATGGAGACA...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGCAGCACCTTCGGTCTaGGAACTGCAGGTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFAAPSV*ELQVCE
Trigger: CTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGC...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGTGCCCATGGCAGCTaGTCCATTCCTGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASCAHGS*SIPGDQ
Trigger: CTGATCCCCAGGAATGGATCAGCTGCCATGGGCACA...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATAGATGCCCTCACTTCTaGGGAATACAGCACACTGAA +
Preference number: 4 (lower is better)
Translates to: GLVGGLVATGPHSLADPHRCPHF*GIQHTE
Trigger: TTCAGTGTGCTGTATTCCTCAGAAGTGAGGGCATCT...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CAAGGTGGGAGGCAGCTGTCCCCTGACCGATGGCAGTGTACTTCCCGAACCCTGCAGCTCAGGGGCATCTaGTCTGCCTCATTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: QGGRQLSPDRWQCTSRTLQLRGI*SASFLK
Trigger: TTTCAAAAATGAGGCAGATCAGATGCCCCTGAGCTG...CAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTCCCACCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGGCTGAAGGTCGTGTGTaGCACCCTCAGATACGCATC +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVAEGRV*HPQIRI
Trigger: GATGCGTATCTGAGGGTGTCACACACGACCTTCAGC...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCGCAGAGGAGGAAGGCTaGATGGACCCAGGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSAEEEG*MDPGRR
Trigger: CCGCCGCCCTGGGTCCATGCAGCCTTCCTCCTCTGC...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACCCGTGCCAAATTTGTTaGGGGCGAAGCACTGATATT +
Preference number: 4 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNPCQIC*GRSTDI
Trigger: AATATCAGTGCTTCGCCCGCAACAAATTTGGCACGG...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGGAAGCACCATCTGGCTaGTCGCGGTGCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKEAPSG*SRCPGD
Trigger: ATCCCCAGGGCACCGCGAGCAGCCAGATGGTGCTTC...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTACCTTTCTTGTACCATaGGATGTCTGGTGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPTFLVP*DVWCWD
Trigger: GTCCCAACACCAGACATCGCATGGTACAAGAAAGGT...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp CAACAGGGTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTGGGTGTGTCGTGTGCCGGATGCTaGCCATCTTGTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QQGCGLLYVCEHAWALGVSCAGC*PSCWRP
Trigger: TGGCCTCCAACAAGATGGGCAGCATCCGGCACACGA...CACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCACAACCCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCTCGTGTGCCGGATGCTaGCCATCTTGTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGSCAGC*PSCWRP
Trigger: TGGCCTCCAACAAGATGGGCAGCATCCGGCACACGA...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGAGATCGTGTGCCGGATaGTGCCCATCTTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEERSCAG*CPSCWR
Trigger: CCTCCAACAAGATGGGCAGCATCCGGCACACGATCT...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACTCACCGAGATCGTGTaGCGGATGCTGCCCATCTTG +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQLTEIV*RMLPIL
Trigger: CAAGATGGGCAGCATCCGGCACACGATCTCGGTGAG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGACGACACAGGTGTAGATaGCCTGGTCCTCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRRHRCR*PGPLCG
Trigger: TCCGCAAAGAGGACCAGGGCATCTACACCTGTGTCG...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGACCCGACACTCCAGCTaGACCGTGGTGCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKTRHSS*TVVPLL
Trigger: CAGAAGGGGCACCACGGTGCAGCTGGAGTGTCGGGT...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTTCAGGGAGGGGTCGTaGTTCACCCGACACTCCAGC +
Preference number: 4 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTFREGS*FTRHSS
Trigger: GCTGGAGTGTCGGGTGAAGCACGACCCCTCCCTGAA...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGCCCTGGTCCCGCTCTaGCACCCCAAAGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLALVPL*HPKDGQ
Trigger: CTGACCATCTTTGGGGTGGCAGAGCGGGACCAGGGC...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGGCCCTGGTCCCGCTCTaGCACCCCAAAGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKALVPL*HPKDGQ
Trigger: CTGACCATCTTTGGGGTGGCAGAGCGGGACCAGGGC...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGCGACACACGTGTAACTaGCCTGGTCCCGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TKSIESSLGGGITTLSTVRHTCN*PGPALP
Trigger: TGGCAGAGCGGGACCAGGGCAGTTACACGTGTGTCG...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAATCCCCAGAGCCCACCTaGGTCCTGGCGCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQSPEPT*VLALRV
Trigger: TACCCTCAGCGCCAGGACGCAGGTGGGCTCTGGGGA...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGCTGTCGTCACTCTCCTaGTGCTTGATGGTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LADPHIVPLLLKVVVASWLSSLS*CLMVPS
Trigger: GGACGGCACCATCAAGCAGCAGGAGAGTGACGACAG...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR GCA 90 bp CGCTCTGCCACCCCAAAGATGGTCAGGGAGTCGTCTTCCTTCTTCATCCTGTTTGAAAAGGTGAGCGTGTaGCGAGGCCAAGGGCGGACA +
Preference number: 4 (lower is better)
Translates to: RSATPKMVRESSSFFILFEKVSV*RGQGRT
Trigger: TGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTC...AAACAGGATGAAGAAGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR GCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGGGGACAGATCAGCGCTaGATAAGGCATACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVGTDQR*IRHTKS
Trigger: GCTCTTTGTATGCCTTATGCAGCGCTGATCTGTCCC...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCTTGCATAGGCTGCCCTaGTCTCCTGGAGATAGACGT +
Preference number: 4 (lower is better)
Translates to: ERLKSEAVPMAADPFLGILHRLP*SPGDRR
Trigger: ACGTCTATCTCCAGGAGAGCAGGGCAGCCTATGCAA...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTCAAATCGGAGGCTGTaGCCATGGCAGCTGATCCAT +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPSNRRL*PWQLIH
Trigger: ATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGA...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGCACTGTGATAAGCTaGCCCTCAGGCGTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASCTVIS*PSGVQA
Trigger: TGCCTGGACGCCTGAGGGGCAGCTTATCACAGTGCA...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR GCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGGCGCCGATGGCATGGTaGTGTCCTGGCTTCACTGTT +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASAPMAW*CPGFTV
Trigger: AACAGTGAAGCCAGGACAGCACCATGCCATCGGCGC...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGACTTCAGGGGAGCCCGTaGCTCTCTGTAGAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRLQGSP*LSVERG
Trigger: ACCTCTTTCTACAGAGAGGCACGGGCTCCCCTGAAG...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGCAGGGCCCTCCTCCATaGTACTCCTTGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLQGPPP*YSLATT
Trigger: CGTGGTGGCCAAGGAGTAGCATGGAGGAGGGCCCTG...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGACCCGGCCACTTGACTaGAGGCACTGCCCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQTRPLD*RHCPRN
Trigger: GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGT...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGACTCCTTGGTCTCACTaGGAGGCCCATCACCTCTCC +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASTPWSH*EAHHLS
Trigger: GGAGAGGTGATGGGCCTCGCAGTGAGACCAAGGAGT...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCTCGAGCCGCTTTAACTaGGCCTCCTGGACAGCACTC +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRSSRFN*ASWTAL
Trigger: GAGTGCTGTCCAGGAGGCCCAGTTAAAGCGGCTCGA...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTTCGAGCCGCTTTAACTaGGCCTCCTGGACAGCACTC +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVSSRFN*ASWTAL
Trigger: GAGTGCTGTCCAGGAGGCCCAGTTAAAGCGGCTCGA...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCCTGTTTCGTGTCCAGTaGAAGCTGGGGGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRLFRVQ*KLGAGF
Trigger: GAACCCTGCCCCCAGCTTCCACTGGACACGAAACAG...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGCAGACCTCCTCCTCATaGACACCCGGGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQQTSSS*TPGGPW
Trigger: CCAAGGACCCCCGGGTGTCCATGAGGAGGAGGTCTG...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGGCAGGCGGATCCTATTaGACAGGGCCGTGCCAAATT +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEEAGGSY*TGPCQI
Trigger: AATTTGGCACGGCCCTGTCCAATAGGATCCGCCTGC...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCTTCTGCTGGATGGTGTaGGTGAAGTGGAAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRFCWMV*VKWKRA
Trigger: CGCCCGCTTCCACTTCACCCACACCATCCAGCAGAA...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCGGGATACATGAAGCTTaGTGTTCTTTCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTGIHEA*CSFCNS
Trigger: GGAGTTGCAGAAAGAACACCAAGCTTCATGTATCCC...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAACTGCTCGCGGTGCCCTaGGGATACATGAAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQLLAVP*GYMKLG
Trigger: ACCAAGCTTCATGTATCCCCAGGGCACCGCGAGCAG...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTGTACCATGCGATGTCTaGTGTTGGGACCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSVPCDV*CWDPGG
Trigger: GCCTCCGGGGTCCCAACACCAGACATCGCATGGTAC...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACGTTTGGGGTTTCCATTaGCTCGACACACCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHVWGFH*LDTPVS
Trigger: GGAGACTGGTGTGTCGAGCCAATGGAAACCCCAAAC...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCGGCCACCTCACGGTTTaGGTTAGGTGGTGCCGATTG +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRGHLTV*VRWCRL
Trigger: CAATCGGCACCACCTAACCCAAACCGTGAGGTGGCC...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp CAACAGGGTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTGGGTGTGGCCCTGCTGCTGATCTaGGTGTCCCGGAAGATGATG +
Preference number: 4 (lower is better)
Translates to: QQGCGLLYVCEHAWALGVALLLI*VSRKMM
Trigger: CATCATCTTCCGGGACACCCAGATCAGCAGCAGGGC...CACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCACAACCCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGTTGGAGGTGTTGCACTaGTACACAGCCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSELEVLH*YTALLL
Trigger: CAGCAGCAGGGCTGTGTACCAGTGCAACACCTCCAA...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGAATCACTCGAATGAGCTaGTTCCGGGGCGACAGCATC +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRITRMS*FRGDSI
Trigger: GATGCTGTCGCCCCGGAACCAGCTCATTCGAGTGAT...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGATCGCAGTGTGGGGATaGGAGACCCAAAGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEEIAVWG*ETQRKG
Trigger: GCCCTTTCTTTGGGTCTCCCATCCCCACACTGCGAT...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGACTCCAGCTGCACCGTaGTGCCCCTTCTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWTPAAP*CPFWPP
Trigger: AGGTGGCCAGAAGGGGCACCACGGTGCAGCTGGAGT...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTCTGCCACCCCAAAGATaGTCAGGGAGTCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLLPPQR*SGSRLP
Trigger: AGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAG...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGCTGCCACCCCAAAGATaGTCAGGGAGTCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEELPPQR*SGSRLP
Trigger: AGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAG...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTGGTCTAGCTCGGTGCTaGCGACACACGTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVGLARC*RHTCNC
Trigger: GCAGTTACACGTGTGTCGCCAGCACCGAGCTAGACC...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCGGTCTAGCTCGGTGCTaGCGACACACGTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGGLARC*RHTCNC
Trigger: GCAGTTACACGTGTGTCGCCAGCACCGAGCTAGACC...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGGCCTTGGCCAGGTCTTaGTCTAGCTCGGTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQALARS*SSSVLA
Trigger: CGCCAGCACCGAGCTAGACCAAGACCTGGCCAAGGC...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGGCCTTGGCCAGGTCTTaGTCTAGCTCGGTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKALARS*SSSVLA
Trigger: CGCCAGCACCGAGCTAGACCAAGACCTGGCCAAGGC...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGACCGATGACGGACTCTaGCTCAGGGCCCTTCCCGAA +
Preference number: 4 (lower is better)
Translates to: TKSIESSLGGGITTLSTVTDDGL*LRALPE
Trigger: TTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATCGGT...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACGGTAGGTGCGACAGTTaGGATGATGGGGACTGTTGT +
Preference number: 4 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHGRCDS*DDGDCC
Trigger: ACAACAGTCCCCATCATCCCAACTGTCGCACCTACC...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp AGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTGCTCTCCAATGAACCAGCCCTaGGTGGCGATGTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: RLRKQDCFSSHTVVLDCSPMNQP*VAMSAW
Trigger: CCAAGCGGACATCGCCACCCAGGGCTGGTTCATTGG...AGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGAGCCATCCTCTTCCTTaGGGTCTTCAGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASSHPLP*GLQGQG
Trigger: CCCTTGGCCCTGAAGACCCCAAGGAAGAGGATGGCT...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTGTGGCTGTGCCTGGGTaGGCTCCGTTAGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLVAVPG*APLGQR
Trigger: TCTCTGGCCTAACGGAGCCCACCCAGGCACAGCCAC...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTCTGGTCCTCACAGCTTaGCAGACCCCCATATCGTAC +
Preference number: 4 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPLVLTA*QTPISY
Trigger: GTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTCTGGTCCTCACAGCTTaGCAGACCCCCATATCGTAC +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLLVLTA*QTPISY
Trigger: GTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGTGGCTTGGTGGCTACTaGTCCTCACAGCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEEWLGGY*SSQLGR
Trigger: TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGATTGTGGGTGGCTTGGTaGCTACTGGTCCTCACAGCT +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRLWVAW*LLVLTA
Trigger: AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAA...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGTTGTGGGTGGCTTGGTaGCTACTGGTCCTCACAGCT +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVLWVAW*LLVLTA
Trigger: AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAA...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGTTGTGGGTGGCTTGGTaGCTACTGGTCCTCACAGCT +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSELWVAW*LLVLTA
Trigger: AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAA...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCTTGTGGGTGGCTTaGTGGCTACTGGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMGLWVA*WLLVLT
Trigger: TGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCC...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGAGGGCGGACAGTGTGGTaGAACGCTCGGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRGRTVW*NARGGC
Trigger: GCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCC...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCAGGACACTGGAACGAGGTGCAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAGAGAAAACAGAGACATTaGGTCTGGAGGGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: AGHWNEVQRQAAGLLLPKRKQRH*VWRGRC
Trigger: GCATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCT...CTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAGCATTGGCCCAGAGGTaGTTTGAATATTACAGCCTG +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRALAQR*FEYYSL
Trigger: CAGGCTGTAATATTCAAACCACCTCTGGGCCAATGC...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTGAGAAAGGCATCCTTTaGAAATGCATTGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTAEKGIL*KCIGPE
Trigger: CTCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTC...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTGCCCTCTACTCTaGACAGGGTGGGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWRCPLL*TGWVWP
Trigger: GGGCCACACCCACCCTGTCCAGAGTAGAGGGCACCT...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAACCATCTCCTCGAGGGTaGCAGCATGGGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQPSPRG*QHGPWP
Trigger: TGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGG...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTAGACCTGCTCAGTCTTaGGGCAAGTCCCCATCCACA +
Preference number: 4 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPRPAQS*GKSPST
Trigger: TGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCT...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTGGAGATAGACGTTGCTaGAGGCTTCAAGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPGDRRC*RLQGLQ
Trigger: CTGCAAGCCTTGAAGCCTCCAGCAACGTCTATCTCC...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGCAGCTGATCCATTCCTaGGGATCAGCTTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVQLIHS*GSASPS
Trigger: GGAGGGTGAAGCTGATCCCCAGGAATGGATCAGCTG...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGTTATTGGCTCAGTTCTaGGCTATGGTTTCTTACCAG +
Preference number: 4 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVLLAQF*AMVSYQ
Trigger: CTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAA...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCGTGCAATGGGTACGCTaGCATGTACGGTGCAGTATG +
Preference number: 4 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTVQWVR*HVRCSM
Trigger: CATACTGCACCGTACATGCCAGCGTACCCATTGCAC...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGAGTCACCAGGTGGTGTaGCAGACTTGCTCATCGTCC +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEESHQVV*QTCSSS
Trigger: GGACGATGAGCAAGTCTGCCACACCACCTGGTGACT...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGAGTGGACTCTGACATaGGCTCCATGGAAAATGCAC +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVEWTLT*APWKMH
Trigger: GTGCATTTTCCATGGAGCCCATGTCAGAGTCCACTC...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGCCTGCTGAGCTGGAGTaGACTCTGACATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASPAELE*TLTWAP
Trigger: TGGAGCCCATGTCAGAGTCCACTCCAGCTCAGCAGG...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGAGCGCCGATGGCATaGTGCTGTCCTGGCTTCACT +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGGAPMA*CCPGFT
Trigger: AGTGAAGCCAGGACAGCACCATGCCATCGGCGCTCC...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACTGTCCCCTGACCGATaGCAGTGTACTTCCCGAACC +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQLSPDR*QCTSRT
Trigger: GGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTAGCTTGTCCGTTAGCTaGGAAACCCACACATCCTCG +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPSLSVS*ETHTSS
Trigger: CGAGGATGTGTGGGTTTCCCAGCTAACGGACAAGCT...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACATCTCCAAGACAATGTTaGAATCTGGATCGCTATCCC +
Preference number: 4 (lower is better)
Translates to: SQGSISSRVAAWALATWTSPRQC*NLDRYP
Trigger: GGGATAGCGATCCAGATTCCAACATTGTCTTGGAGA...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCTTTGGTGGACGCTTGTaGCTCTCCTGGATGGTTCTC +
Preference number: 4 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTFGGRL*LSWMVL
Trigger: GAGAACCATCCAGGAGAGCCACAAGCGTCCACCAAA...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CAAGGTGGGAGGCAGCTGTCCCCTGACCGATGGCAGTGTACTTCCCGAACCCTGGCTATCCTATTCCACTaGCCCAGATCTGCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: QGGRQLSPDRWQCTSRTLAILFH*PRSALN
Trigger: ATTAAGGGCAGATCTGGGCCAGTGGAATAGGATAGC...CAGGGTTCGGGAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTCCCACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCTGTCCGCTTGGTTGTTaGTGTAAGCTGCGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: ERLKSEAVPMAADPFLGICPLGC*CKLRLE
Trigger: CTCCAACCGCAGCTTACACCAACAACCAAGCGGACA...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367173.7
ENST00000404076.5
CDS-3UTR CCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCACGGTACTCTCTGAGCTaGCCCTGGACCGTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPRYSLS*PWTVSE
Trigger: CTCCGACACGGTCCAGGGCCAGCTCAGAGAGTACCG...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404076.5
ENST00000504476.5
3UTR CAA 72 bp TGTGTTGAGTGGCCACTTCTGGTCCTGCCGGAACACTaGCATAGGCTGCCCTGCTCTCCTGGAGATAGACGT +
Preference number: 4 (lower is better)
Translates to: CVEWPLLVLPEH*HRLPCSPGDRR
Trigger: ACGTCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTGGCCACTCAACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CAA 72 bp GTAGATCCTGGTGGGGTCTTTGACCTCCAGGCGGACTaGGTTTTCAGCTTTGCCCAGGATGTTGGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: VDPGGVFDLQAD*VFSFAQDVGGD
Trigger: GTCGCCACCAACATCCTGGGCAAAGCTGAAAACCAAGTCCGCCTGGAGGTCAAAGACCCCACCAGGATCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR TCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTCGGGGGTCCACGATGTaGTCCTTCGCTGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLRGSTM*SFADCL
Trigger: CAAGCAGTCAGCGAAGGATCACATCGTGGACCCCCG...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAATGCTCATCCAGAAGATaGCCGGGGATGGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQCSSRR*PGMEVQ
Trigger: CTGGACTTCCATCCCCGGTCATCTTCTGGATGAGCA...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTTGCTCATCCAGAAGATaGCCGGGGATGGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTCSSRR*PGMEVQ
Trigger: CTGGACTTCCATCCCCGGTCATCTTCTGGATGAGCA...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCTGCTCATCCAGAAGATaGCCGGGGATGGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRCSSRR*PGMEVQ
Trigger: CTGGACTTCCATCCCCGGTCATCTTCTGGATGAGCA...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGCACGTTTGTCTTGGGTaGTGGGCTCCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKHVCLG*WAPWSC
Trigger: GCAGCTCCATGGAGCCCATCACCCAAGACAAACGTG...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGTCAGCCAGGAGACGGTaGGTTTCAGGGAGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKSARRR*VSGRGR
Trigger: ACGACCCCTCCCTGAAACTCACCGTCTCCTGGCTGA...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGCAGCCGGAGGACGGCTaGGTTAACGCTGCCGGGGTA +
Preference number: 4 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLQPEDG*VNAAGV
Trigger: TACCCCGGCAGCGTTAACTCAGCCGTCCTCCGGCTG...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp AGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTGCTCTCTCTCCGCCTCCACTTaGCAATGTAGCGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RLRKQDCFSSHTVVLDCSLSAST*QCSAGW
Trigger: CCAACCTGCGCTACATTGTCAAGTGGAGGCGGAGAG...AGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGGAGAGCCCCACACTGTaGCGTTGTTCCAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWESPTL*RCSRPL
Trigger: GAGAGGCCTGGAACAACGTCACAGTGTGGGGCTCTC...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGAGATCCCATTCCAGGTTaGTTGTCTCCAGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRDPIPG*LSPGWA
Trigger: AGCCCAACCTGGAGACAATCAACCTGGAATGGGATC...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGACCGTGAACTTGGTCTaGTTGGGAGAGAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVTVNLV*LGEKFS
Trigger: GGAAAACTTCTCTCCCAATCAGACCAAGTTCACGGT...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATACCGTTCTTTGCACCGTaGACTTGGTCTGATTGGGAG +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIPFFAP*TWSDWE
Trigger: CTCCCAATCAGACCAAGTTCACGGTGCAAAGAACGG...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp GTAACCGATGACGGACTCTGGCTCAGGGCCCTTCCCGAAGTCATTTTCAGCCTGCCGTTCTTTGCACCGTaGACTTGGTCTGATTGGGAG +
Preference number: 4 (lower is better)
Translates to: VTDDGLWLRALPEVIFSLPFFAP*TWSDWE
Trigger: CTCCCAATCAGACCAAGTTCACGGTGCAAAGAACGG...CAGGCTGAAAATGACTTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATCGGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR TCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGGGTAAAGCGGTAGCGTaGCACGGGGTCCGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: TKSIESSLGGGITTLSTVGKAVA*HGVRSL
Trigger: CAAAGAACGGACCCCGTGTCACGCTACCGCTTTACC...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTATTCGGGGGTGCTGGTaGCTCCTCTGTGACGGCTTC +
Preference number: 4 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTIRGCW*LLCDGF
Trigger: GAAGCCGTCACAGAGGAGTCACCAGCACCCCCGAAT...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCACTATAGTCAAATaGGCCATCCTCTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GLVGGLVATGPHSLADPHITIVK*AILFLG
Trigger: CCCAAGGAAGAGGATGGCTCATTTGACTATAGTGAT...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTTCGTACCCTTGTTACTaGAGGTGGTGGTGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPSYPCY*RWWWLR
Trigger: ACGAAGCCACCACCACCTTCAGTAACAAGGGTACGA...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGAGGGCAGGGGAGGAATaGGGAGCAAGAGGTAAACAC +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASRAGEE*GARGKH
Trigger: GTGTTTACCTCTTGCTCCTCATTCCTCCCCTGCCCT...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTCCAAGACCAGACACCTaGTTTTCTTCTGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPPRPDT*FSSAGG
Trigger: ACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGG...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGCACCTCAGGGTCCCCTaGTATGTATACACCCCAATG +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVHLRVP*YVYTPM
Trigger: CATTGGGGTGTATACATATCAGGGGACCCTGAGGTG...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTGCAGCACCTTCGGTCTaGGAACTGCAGGTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLAAPSV*ELQVCE
Trigger: CTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGC...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATACAAATGGGCTGTTTGTaGTGCCCTAAGACTTGGCCC +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIQMGCL*CPKTWP
Trigger: GGGCCAAGTCTTAGGGCATCACAAACAGCCCATTTG...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTTGCACCAAGGTGTCATaGGTGGGGAGCGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLCTKVS*VGSGAL
Trigger: CAAGGCACCGCTCCCCACTCATGACACCTTGGTGCA...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTAACAGCAGCTTCAGGTaGGGCCTGAGACACTGTTTG +
Preference number: 4 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPNSSFR*GLRHCL
Trigger: CAAACAGTGTCTCAGGCCTCACCTGAAGCTGCTGTT...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTGAGATGAAAGAACACTaGCTGGACAAGGAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTAEMKEH*LDKESE
Trigger: TTCTGACTCCTTGTCCAGTCAGTGTTCTTTCATCTC...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGAGAAGTCTTCCCTGCTaGAGGTCGTGTGTGACACCC +
Preference number: 4 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMRSLPC*RSCVTP
Trigger: GGGTGTCACACACGACCTTCAGCAGGGAAGACTTCT...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGAGAGATCACCACGCCTaGCCCGGCCACTTGACTGCA +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQRDHHA*PGHLTA
Trigger: TGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCT...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGATATTGGACAGGGCCGTaGCAAATTTGTTGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRYWTGP*QICCGR
Trigger: TCGCCCGCAACAAATTTGGCACGGCCCTGTCCAATA...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGTATTGGACAGGGCCGTaGCAAATTTGTTGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEYWTGP*QICCGR
Trigger: TCGCCCGCAACAAATTTGGCACGGCCCTGTCCAATA...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGTATTGGACAGGGCCGTaGCAAATTTGTTGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEEYWTGP*QICCGR
Trigger: TCGCCCGCAACAAATTTGGCACGGCCCTGTCCAATA...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTTCGGTCTGCATGTCCTaGAGCATCACGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLSVCMS*SITLEK
Trigger: CTTCTCCAACGTGATGCTGCAGGACATGCAGACCGA...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTCCAGCAGGAGGTCCATaGCACGAAGCACCATCTGGC +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLPAGGP*HEAPSG
Trigger: GCCAGATGGTGCTTCGTGGCATGGACCTCCTGCTGG...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGCCAGCAGGAGGTCCATaGCACGAAGCACCATCTGGC +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKPAGGP*HEAPSG
Trigger: GCCAGATGGTGCTTCGTGGCATGGACCTCCTGCTGG...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGACCTTTCTTGTACCATaGGATGTCTGGTGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVTFLVP*DVWCWD
Trigger: GTCCCAACACCAGACATCGCATGGTACAAGAAAGGT...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp CGCTCTGCCACCCCAAAGATGGTCAGGGAGTCGTCTTCCTTCTTCATCCTGTTTTCGTGTGCCGGATGCTaGCCATCTTGTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RSATPKMVRESSSFFILFSCAGC*PSCWRP
Trigger: TGGCCTCCAACAAGATGGGCAGCATCCGGCACACGA...AAACAGGATGAAGAAGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR GCA 90 bp GCTCTGCCACCCCAAAGATGGTCAGGGAGTCGTCTTCCTTCTTCATCCTGTTTCCTCACCGAGATCGTGTaGCGGATGCTGCCCATCTTG +
Preference number: 4 (lower is better)
Translates to: ALPPQRWSGSRLPSSSCFLTEIV*RMLPIL
Trigger: CAAGATGGGCAGCATCCGGCACACGATCTCGGTGAG...GAAACAGGATGAAGAAGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR GCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCCGACACAGGTGTAGATaGCCTGGTCCTCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRRHRCR*PGPLCG
Trigger: TCCGCAAAGAGGACCAGGGCATCTACACCTGTGTCG...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGTTCAGGGAGGGGTCGTaGTTCACCCGACACTCCAGC +
Preference number: 4 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLFREGS*FTRHSS
Trigger: GCTGGAGTGTCGGGTGAAGCACGACCCCTCCCTGAA...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TCTCCCATTGACCACAACCATCTCCAGCTTGTAGTTACTGTAGGGGAAGAGGCGTTCAGGGAGGGGTCGTaGTTCACCCGACACTCCAGC +
Preference number: 4 (lower is better)
Translates to: SPIDHNHLQLVVTVGEEAFREGS*FTRHSS
Trigger: GCTGGAGTGTCGGGTGAAGCACGACCCCTCCCTGAA...CGCCTCTTCCCCTACAGTAACTACAAGCTGGAGATGGTTGTGGTCAATGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR GCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGCGACACACGTGTAACTaGCCTGGTCCCGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQRHTCN*PGPALP
Trigger: TGGCAGAGCGGGACCAGGGCAGTTACACGTGTGTCG...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACTTGGTCTAGCTCGGTaGTGGCGACACACGTGTAAC +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQLGLAR*WRHTCN
Trigger: GTTACACGTGTGTCGCCAGCACCGAGCTAGACCAAG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCCTTGGTCTAGCTCGGTaGTGGCGACACACGTGTAAC +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRLGLAR*WRHTCN
Trigger: GTTACACGTGTGTCGCCAGCACCGAGCTAGACCAAG...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCTACTTGGAATGGTCATaGCAGACCCCAGGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIYLEWS*QTPGWN
Trigger: GTTCCAACCTGGGGTCTGGCATGACCATTCCAAGTA...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAGTCTCCAGGTTGGGCTaGCGGACTCGGAAACGCCTA +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPVSRLG*RTRKRL
Trigger: TAGGCGTTTCCGAGTCCGGCAGCCCAACCTGGAGAC...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR GCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTCTGTCGTCACTCTCCTaGTGCTTGATGGTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGLSSLS*CLMVPS
Trigger: GGACGGCACCATCAAGCAGCAGGAGAGTGACGACAG...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR GCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTGAAAAGGTGAGCGTGTaGCGAGGCCAAGGGCGGACA +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLEKVSV*RGQGRT
Trigger: TGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTC...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTAGCAGCAAGGAGGCCTaGGCACCTTCTCCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTSSKEA*APSPCQ
Trigger: TTGGCAGGGAGAAGGTGCGCAGGCCTCCTTGCTGCT...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGGCCACGTGGACAGGTaGCCTCTACTCTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQGHVDR*PLLWTG
Trigger: CCCTGTCCAGAGTAGAGGGCACCTGTCCACGTGGCC...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCGGGACAGATCAGCGCTaGATAAGGCATACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIGTDQR*IRHTKS
Trigger: GCTCTTTGTATGCCTTATGCAGCGCTGATCTGTCCC...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTAACACTTGCATAGGCTaGCCTGCTCTCCTGGAGATA +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPNTCIG*PALLEI
Trigger: TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTT...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGTCAAATCGGAGGCTGTaGCCATGGCAGCTGATCCAT +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEESNRRL*PWQLIH
Trigger: ATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGA...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTCTCATCGTCCCTTCCTaGCCTAAGGGCCTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGLIVPS*PKGLLS
Trigger: CGAAAGCAGGCCCTTAGGGCAGGAAGGGACGATGAG...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTATCTCTCTGACCACCTaGCTTCCTTGCTTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPISLTT*LPCLGK
Trigger: TTTCCCCAAGCAAGGAAGGCAGGTGGTCAGAGAGAT...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTATGTCTTGGGGTAGTTaGTTGGGAGACCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTMSWGS*LGDPAG
Trigger: GCCAGCTGGGTCTCCCAAGCAACTACCCCAAGACAT...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCATGAGTGGGGAGCGGTaGCTTGTGCCGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSMSGER*LVPASQ
Trigger: CTGGGAGGCCGGCACAAGGCACCGCTCCCCACTCAT...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAATGCCCGGCTTGCCTATaGCTCCCAGGGCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQCPACL*LPGPWS
Trigger: AGACCAAGGCCCTGGGAGGCATAGGCAAGCCGGGCA...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATTCCAGGTTGCTTCCTTaGCCATTCTTAAACCTCACA +
Preference number: 4 (lower is better)
Translates to: GLVGGLVATGPHSLADPHSRLLP*PFLNLT
Trigger: TGTGAGGTTTAAGAATGGGCAAGGAAGCAACCTGGA...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGTCGAGCCGCTTTAACTaGGCCTCCTGGACAGCACTC +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKSSRFN*ASWTAL
Trigger: GAGTGCTGTCCAGGAGGCCCAGTTAAAGCGGCTCGA...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGCTGCTTGGTGATGGTTaGCGGCTGCGTCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMLLGDG*RLRQLI
Trigger: AATGAGCTGACGCAGCCGCCAACCATCACCAAGCAG...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGCTGCTTGGTGATGGTTaGCGGCTGCGTCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: LADPHIVPLLLKVVVASWLLGDG*RLRQLI
Trigger: AATGAGCTGACGCAGCCGCCAACCATCACCAAGCAG...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000504476.5
CDS-3UTR CCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGGTGTCCAGTGGAAGCTaGGGGCAGGGTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKVSSGS*GQGSLL
Trigger: CAAAAGGGAACCCTGCCCCCAGCTTCCACTGGACAC...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GCTCTGCCACCCCAAAGATGGTCAGGGAGTCGTCTTCCTTCTTCATCCTGTTTCCTGTTTCGTGTCCAGTaGAAGCTGGGGGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: ALPPQRWSGSRLPSSSCFLFRVQ*KLGAGF
Trigger: GAACCCTGCCCCCAGCTTCCACTGGACACGAAACAG...GAAACAGGATGAAGAAGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCGCAGGCGGATCCTATTaGACAGGGCCGTGCCAAATT +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRAGGSY*TGPCQI
Trigger: AATTTGGCACGGCCCTGTCCAATAGGATCCGCCTGC...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGACACGTTTGTCTTaGGTGATGGGCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEETRLS*VMGSME
Trigger: CTCCATGGAGCCCATCACCCAAGACAAACGTGTCTC...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGTTCTGCTGGATGGTGTaGGTGAAGTGGAAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKFCWMV*VKWKRA
Trigger: CGCCCGCTTCCACTTCACCCACACCATCCAGCAGAA...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCCTGCTCGCGGTGCCCTaGGGATACATGAAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTLLAVP*GYMKLG
Trigger: ACCAAGCTTCATGTATCCCCAGGGCACCGCGAGCAG...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp CGCTCTGCCACCCCAAAGATGGTCAGGGAGTCGTCTTCCTTCTTCATCCTGTTTCTGCTCGCGGTGCCCTaGGGATACATGAAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: RSATPKMVRESSSFFILFLLAVP*GYMKLG
Trigger: ACCAAGCTTCATGTATCCCCAGGGCACCGCGAGCAG...AAACAGGATGAAGAAGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACTGCTGCCCATCTTGTTaGAGGCCAGGCAGAAATACT +
Preference number: 4 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHCCPSC*RPGRNT
Trigger: AGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCA...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGTTTGGGGTTTCCATTaGCTCGACACACCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIVWGFH*LDTPVS
Trigger: GGAGACTGGTGTGTCGAGCCAATGGAAACCCCAAAC...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGCCATCCACTGGACAGTaGGTTTGGGGTTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEPSTGQ*VWGFHW
Trigger: CCAATGGAAACCCCAAACCCACTGTCCAGTGGATGG...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATACCATCCACTGGACAGTaGGTTTGGGGTTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIPSTGQ*VWGFHW
Trigger: CCAATGGAAACCCCAAACCCACTGTCCAGTGGATGG...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCGCCCTGCTGCTGATCTaGGTGTCCCGGAAGATGATG +
Preference number: 4 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTALLLI*VSRKMM
Trigger: CATCATCTTCCGGGACACCCAGATCAGCAGCAGGGC...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCTTGGAGGTGTTGCACTaGTACACAGCCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGLEVLH*YTALLL
Trigger: CAGCAGCAGGGCTGTGTACCAGTGCAACACCTCCAA...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGTAGCCATGCTCGTTaGAGGTGTTGCACTGGTACA +
Preference number: 4 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPGSHAR*RCCTGT
Trigger: TGTACCAGTGCAACACCTCCAACGAGCATGGCTACC...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCATCACTCGAATGAGCTaGTTCCGGGGCGACAGCATC +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGITRMS*FRGDSI
Trigger: GATGCTGTCGCCCCGGAACCAGCTCATTCGAGTGAT...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGCTTTGCCCAGGATGTTaGTGGCGACACAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVLCPGC*WRHRCR
Trigger: TCTACACCTGTGTCGCCACCAACATCCTGGGCAAAG...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTCTGCCACCCCAAAGATaGTCAGGGAGTCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVLPPQR*SGSRLP
Trigger: AGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAG...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCCTGCCACCCCAAAGATaGTCAGGGAGTCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGLPPQR*SGSRLP
Trigger: AGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAG...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGTCTAGCTCGGTGCTaGCGACACACGTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGGLARC*RHTCNC
Trigger: GCAGTTACACGTGTGTCGCCAGCACCGAGCTAGACC...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CGCTCTGCCACCCCAAAGATGGTCAGGGAGTCGTCTTCCTTCTTCATCCTGTTTCCGGGGTACTTGGAATaGTCATGCCAGACCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RSATPKMVRESSSFFILFPGYLE*SCQTPG
Trigger: ACCTGGGGTCTGGCATGACCATTCCAAGTACCCCGG...AAACAGGATGAAGAAGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCACAATGTAGCGCAGGTTaGGGCCAAAGGCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPQCSAG*GQRPRW
Trigger: CCACCTCGGCCTTTGGCCCCAACCTGCGCTACATTG...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCAATCATGATCCCATTTaGATGCTCAGGATGATCCCA +
Preference number: 4 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTNHDPI*MLRMIP
Trigger: TGGGATCATCCTGAGCATCCAAATGGGATCATGATT...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTCTTCTTTTCTCGTACTaGGTACTTGCCGCCGCGACT +
Preference number: 4 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPLLFSY*VLAAAT
Trigger: AGTCGCGGCGGCAAGTACCCAGTACGAGAAAAGAAG...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGCTTCTTTTCTCGTACTaGGTACTTGCCGCCGCGACT +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSELLFSY*VLAAAT
Trigger: AGTCGCGGCGGCAAGTACCCAGTACGAGAAAAGAAG...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCTTTTTGACCGTGTACTaGCCGATGAAGGAGCCGTCT +
Preference number: 4 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTFLTVY*PMKEPS
Trigger: AGACGGCTCCTTCATCGGCCAGTACACGGTCAAAAA...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAAGTGGTGGCTGTGCCTaGGTGGGCTCCGTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQSGGCA*VGSVRP
Trigger: TGGCCTAACGGAGCCCACCCAGGCACAGCCACCACT...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTCTGGTCCTCACAGCTTaGCAGACCCCCATATCGTAC +
Preference number: 4 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTLVLTA*QTPISY
Trigger: GTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGTGGCTTGGTGGCTACTaGTCCTCACAGCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMWLGGY*SSQLGR
Trigger: TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTAGGGCGGACAGTGTGGTaGAACGCTCGGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: MHWPRGGLNITACLRVLVGRTVW*NARGGC
Trigger: GCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCC...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCGGGCGGACAGTGTGGTaGAACGCTCGGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPGRTVW*NARGGC
Trigger: GCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCC...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCCAAGGGCGGACAGTGTaGTGGAACGCTCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSQGRTV*WNARGG
Trigger: GCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTG...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGAGAAAACAGAGACATTaGGTCTGGAGGGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVRKQRH*VWRGRC
Trigger: GCATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCT...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGCTACGTGTTCTGGTATaGATTCAATCCTTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: ASQGSISSRVAAWALATWLRVLV*IQSFLP
Trigger: AGGCAAAAAGGATTGAATCCATACCAGAACACGTAG...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTCTACTCTGGACAGGGTaGGTGTGGCCCTCTATCTAC +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVLLWTG*VWPSIY
Trigger: GTAGATAGAGGGCCACACCCACCCTGTCCAGAGTAG...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCTGGCAGCATGGGCCCTaGCCACGTGGACAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPWQHGP*PRGQVP
Trigger: GGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCA...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTAGGACGTGTGTTGAGTaGCCACTTCTGGTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFRTCVE*PLLVLP
Trigger: CGGCAGGACCAGAAGTGGCCACTCAACACACGTCCT...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTAGGACGTGTGTTGAGTaGCCACTTCTGGTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSRTCVE*PLLVLP
Trigger: CGGCAGGACCAGAAGTGGCCACTCAACACACGTCCT...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTAGGACGTGTGTTGAGTaGCCACTTCTGGTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGRTCVE*PLLVLP
Trigger: CGGCAGGACCAGAAGTGGCCACTCAACACACGTCCT...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTACCCAGGCCCCCTGGCTaGCAGCCGGAGAGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: MHWPRGGLNITACLRVLVPRPPG*QPERLK
Trigger: TTTGAGCCTCTCCGGCTGCCAGCCAGGGGGCCTGGG...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGGAGCGCCGATGGCATaGTGCTGTCCTGGCTTCACT +
Preference number: 4 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLGAPMA*CCPGFT
Trigger: AGTGAAGCCAGGACAGCACCATGCCATCGGCGCTCC...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGTATGTGAGCATGCGTaGGCACTGGGTGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLVCEHA*ALGVAG
Trigger: CCCTGCCACACCCAGTGCCCACGCATGCTCACATAC...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGGCCGGAGTGGTGACTaGGCAGGAGGTCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQGRSGD*AGGHSA
Trigger: TGCAGAGTGACCTCCTGCCCAGTCACCACTCCGGCC...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp AGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTGCTCTGAAAGGACACTTCCCTaGGCTTGGGCTGTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RLRKQDCFSSHTVVLDCSERTLP*AWAVQA
Trigger: AGCCTGCACAGCCCAAGCCCAGGGAAGTGTCCTTTC...AGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGATCCCTTCACTTCTGTaGATTTGCATATCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVIPSLL*ICISLS
Trigger: AGACAAGGATATGCAAATCCACAGAAGTGAAGGGAT...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTTTAGACGGCCCTCCATaGCCCAGAAGTCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFLDGPP*PRSLPC
Trigger: GCAGGGAAGACTTCTGGGCCATGGAGGGCCGTCTAA...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGATGTCCGCTTGGTTGTTaGTGTAAGCTGCGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRCPLGC*CKLRLE
Trigger: CTCCAACCGCAGCTTACACCAACAACCAAGCGGACA...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367173.7
ENST00000404076.5
CDS-3UTR CCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTCAGTGGGCGCAGCCCTaGGATAATCTTCTCCGGAGT +
Preference number: 4 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFQWAQP*DNLLRS
Trigger: ACTCCGGAGAAGATTATCCCAGGGCTGCGCCCACTG...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404076.5
3UTR CAA 72 bp CTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTACCCTTGTTACTGAAG +
Preference number: 4 (lower is better)
Translates to: LVGGLVATGPHS*ADPHIVPLLLK
Trigger: CTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000504476.5
ENST00000513543.5
ENST00000539706.5
3UTR CAA 72 bp GCAGTGCCTTATGCCCCAAACACACCAGCAAAGCTTTaGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AVPYAPNTPAKL*HHRVPSPRGWQ
Trigger: CTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTGTGTTTGGGGCATAAGGCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
CDS-3UTR TCA 90 bp GTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGGAGACCCAGCTGGATGTGATCCTTCGCTaGCTGCTTGGTGATGGTTGG +
Preference number: 4 (lower is better)
Translates to: VLASLLVCLGVVAWETQLDVILR*LLGDGW
Trigger: CCAACCATCACCAAGCAGTCAGCGAAGGATCACATC...CAGCTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGATGTGATCCTTCGCTaGCTGCTTGGTGATGGTTGG +
Preference number: 4 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTDVILR*LLGDGW
Trigger: CCAACCATCACCAAGCAGTCAGCGAAGGATCACATC...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCGATGTGATCCTTCGCTaGCTGCTTGGTGATGGTTGG +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRDVILR*LLGDGW
Trigger: CCAACCATCACCAAGCAGTCAGCGAAGGATCACATC...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGGTCCTTGGCGATGTTaGAGAATCTGCTGTTTCGTG +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIGPWRC*RICCFV
Trigger: CACGAAACAGCAGATTCTTCAACATCGCCAAGGACC...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTTTGCGGGCGAAGCACTaGTATTCCCCCTCATATTCC +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVLRAKH*YSPSYS
Trigger: GGAATATGAGGGGGAATATCAGTGCTTCGCCCGCAA...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGCACGTTTGTCTTGGGTaGTGGGCTCCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKHVCLG*WAPWSC
Trigger: GCAGCTCCATGGAGCCCATCACCCAAGACAAACGTG...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGTGCCCTGGGGATACATaGAGCTTGGTGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSECPGDT*SLVFFL
Trigger: CAGAAAGAACACCAAGCTTCATGTATCCCCAGGGCA...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGAGGGTGTCCCGGAAGATaGTGGTGTCTCCGGCCACCT +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRGCPGR*WCLRPP
Trigger: AGGTGGCCGGAGACACCATCATCTTCCGGGACACCC...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCGGGTGTCCCGGAAGATaGTGGTGTCTCCGGCCACCT +
Preference number: 4 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSGCPGR*WCLRPP
Trigger: AGGTGGCCGGAGACACCATCATCTTCCGGGACACCC...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGGCACATCCAGCACACTaGCAAAGGCGTTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQAHPAH*QRRWPA
Trigger: TGCTGGCCAACGCCTTTGTCAGTGTGCTGGATGTGC...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTCAGCCGGAGGACGGCTaGGTTAACGCTGCCGGGGTA +
Preference number: 4 (lower is better)
Translates to: WPRGGLNITACLRVLVWIQPEDG*VNAAGV
Trigger: TACCCCGGCAGCGTTAACTCAGCCGTCCTCCGGCTG...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTTCATGGGCGTCCACGTaGTCTCCATGTTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLSWAST*SPCCSF
Trigger: GAAAGAACAACATGGAGATCACGTGGACGCCCATGA...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTCCGTTCTTTGCACCGTaGACTTGGTCTGATTGGGAG +
Preference number: 4 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTPFFAP*TWSDWE
Trigger: CTCCCAATCAGACCAAGTTCACGGTGCAAAGAACGG...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGACTGGTGACTCCTCTGTaGCGGCTTCCCCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRLVTPL*RLPQSP
Trigger: TGGGCTCTGGGGAAGCCGTCACAGAGGAGTCACCAG...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGTGCGACAGTTGGGATaGTGGGGACTGTTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGVRQLG*WGLLWL
Trigger: AAGCCACAACAGTCCCCATCATCCCAACTGTCGCAC...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGAATTGTGCTTCCAGGTaGTGTTGGCCCATTTACTGT +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVNCASR*CWPIYC
Trigger: ACAGTAAATGGGCCAACATCACCTGGAAGCACAATT...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCACACTCTCCTGCTGCTTaGTGGTGCCGTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPHSPAA*WCRPEM
Trigger: CATCTCTGGACGGCACCATCAAGCAGCAGGAGAGTG...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGAGCCGTCTTCATTaGACTGACCCTCGCCACCCT +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPRSRLH*TDPRHP
Trigger: AGGGTGGCGAGGGTCAGTTCAATGAAGACGGCTCCT...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTAACCAACAGAAAAGGTaGGCGTGTGCCGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGNQQKR*ACAEAK
Trigger: CTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTT...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp GCTCTGCCACCCCAAAGATGGTCAGGGAGTCGTCTTCCTTCTTCATCCTGTTTCAACCAACAGAAAAGGTaGGCGTGTGCCGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: ALPPQRWSGSRLPSSSCFNQQKR*ACAEAK
Trigger: CTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTT...GAAACAGGATGAAGAAGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR TCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCCAGAGGTGGTTTaGATATTACAGCCTGTCTAC +
Preference number: 4 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPGPEVV*ILQPVY
Trigger: GTAGACAGGCTGTAATATTCAAACCACCTCTGGGCC...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGATGTATACACCCCAATaGAAGGGCAGACCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVMYTPQ*KGRPAQ
Trigger: CTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACAT...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGCATACAAAGAGCATTaGGTCCTCCCTAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFAYKEH*VLPRWG
Trigger: CCCCCACCTAGGGAGGACTCAATGCTCTTTGTATGC...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGTCTCCATTTGGGGTaGCTGGTGAGGACGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASCLHLG*LVRTCV
Trigger: AACACACGTCCTCACCAGTCACCCCAAATGGAGACA...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTTGTGCCCATGGCAGCTaGTCCATTCCTGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTCAHGS*SIPGDQ
Trigger: CTGATCCCCAGGAATGGATCAGCTGCCATGGGCACA...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGGAGGCTTGGCCCAAATaGCCATTACACACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LADPHIVPLLLKVVVASWEAWPK*PLHTLR
Trigger: CCTGAGAGTGTGTAATGGTCATTTGGGCCAAGCCTC...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCTATGGAATGAGTGTCTaGGAAACTGACTACTCTGCT +
Preference number: 4 (lower is better)
Translates to: LNSSPANPRVAACMGPAAYGMSV*ETDYSA
Trigger: AGCAGAGTAGTCAGTTTCTCAGACACTCATTCCATA...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATATGGTCAGGGAAACTATaGATGCGCTATGTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIWSGKL*MRYVGS
Trigger: TGAGCCCACATAGCGCATTCATAGTTTCCCTGACCA...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CAACAGGGTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTGGGTGTGCAAATGGGCTGTTTGTaGTGCCCTAAGACTTGGCCC +
Preference number: 4 (lower is better)
Translates to: QQGCGLLYVCEHAWALGVQMGCL*CPKTWP
Trigger: GGGCCAAGTCTTAGGGCATCACAAACAGCCCATTTG...CACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCACAACCCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAGAACCTGCTGGCCACTaGGAAGGGATTCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPEPAGH*EGILWH
Trigger: GTGCCAGAGAATCCCTTCTCAGTGGCCAGCAGGTTC...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGGCTTCAGGTGAGGCCTaGGACACTGTTTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWASGEA*DTVWWT
Trigger: CGTCCACCAAACAGTGTCTCAGGCCTCACCTGAAGC...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGAGGGACAACACTGACTaGGGACATTGCAGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVRDNTD*GHCSWE
Trigger: TTCCCAACTGCAATGTCCTCAGTCAGTGTTGTCCCT...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGAGTTACCTAGCACGGTaGGGTAGGCCTTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQSYLAR*GRPWPG
Trigger: ACCTGGCCAAGGCCTACCTCACCGTGCTAGGTAACT...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCCAGCACAGCTTGTTCTaGAACTGGCAGCTCCCTAAC +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRQHSLF*NWQLPN
Trigger: GTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTG...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCCAGGCCCCTTTCAGTTaGGACGTGGGGAAGTTAATG +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGQAPFS*DVGKLM
Trigger: CATTAACTTCCCCACGTCTCAACTGAAAGGGGCCTG...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGGAGATTTAGACACCTaGAGGCGGATCCTATTGGAC +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEGDLDT*RRILLD
Trigger: GTCCAATAGGATCCGCCTGCAGGTGTCTAAATCTCC...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGTCGGTCTGCATGTCCTaGAGCATCACGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LADPHIVPLLLKVVVASWSVCMS*SITLEK
Trigger: CTTCTCCAACGTGATGCTGCAGGACATGCAGACCGA...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCTCGGTCTGCATGTCCTaGAGCATCACGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRSVCMS*SITLEK
Trigger: CTTCTCCAACGTGATGCTGCAGGACATGCAGACCGA...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGCTCACCGAGATCGTGTaGCGGATGCTGCCCATCTTG +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKLTEIV*RMLPIL
Trigger: CAAGATGGGCAGCATCCGGCACACGATCTCGGTGAG...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGGCTCGTTGGAGGTGTTaGACTGGTACACAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKARWRC*TGTQPC
Trigger: GCAGGGCTGTGTACCAGTGCAACACCTCCAACGAGC...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTCGACACAGGTGTAGATaGCCTGGTCCTCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFRHRCR*PGPLCG
Trigger: TCCGCAAAGAGGACCAGGGCATCTACACCTGTGTCG...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATATACTTGGAATGGTCATaGCAGACCCCAGGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIYLEWS*QTPGWN
Trigger: GTTCCAACCTGGGGTCTGGCATGACCATTCCAAGTA...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGTCCCCAGAGCCCACCTaGGTCCTGGCGCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: PQCPTELAEKMISARDGRSPEPT*VLALRV
Trigger: TACCCTCAGCGCCAGGACGCAGGTGGGCTCTGGGGA...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR GCA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTTCGTCACTCTCCTGCTaGTTGATGGTGCCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSSSLSC*LMVPSR
Trigger: TCTGGACGGCACCATCAAGCAGCAGGAGAGTGACGA...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GCTCTGCCACCCCAAAGATGGTCAGGGAGTCGTCTTCCTTCTTCATCCTGTTTCTCGTCACTCTCCTGCTaGTTGATGGTGCCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: ALPPQRWSGSRLPSSSCFSSLSC*LMVPSR
Trigger: TCTGGACGGCACCATCAAGCAGCAGGAGAGTGACGA...GAAACAGGATGAAGAAGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR GCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCACTGTCGTCACTCTCCTaGTGCTTGATGGTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPLSSLS*CLMVPS
Trigger: GGACGGCACCATCAAGCAGCAGGAGAGTGACGACAG...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR GCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGAGTCCTTTCTATCAGTaGCCACTCCTGTTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVSPFYQ*PLLFLK
Trigger: TTTGAGGAACAGGAGTGGGCACTGATAGAAAGGACT...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGCCTGCCCTAAGGGCCTaGTTTCGGTGCAATGGGTAC +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWPALRA*FRCNGY
Trigger: GTACCCATTGCACCGAAAGCAGGCCCTTAGGGCAGG...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCACCTGCCCTAAGGGCCTaGTTTCGGTGCAATGGGTAC +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPPALRA*FRCNGY
Trigger: GTACCCATTGCACCGAAAGCAGGCCCTTAGGGCAGG...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTCTTCCCCAAAGGGGCTaGCTCCTGAATCCTGCAATC +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGLPQRG*LLNPAI
Trigger: GATTGCAGGATTCAGGAGGCAGCCCCTTTGGGGAAG...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAATCCCTTGGAAGCACTaGTTGGCAACAGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQIPWKH*LATGLW
Trigger: CCACAACCCTGTTGCCAAGCAGTGCTTCCAAGGGAT...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTCCCACTCCTCTAAGGTaGGTTCCTCATCCACACAGA +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVPTPLR*VPHPHR
Trigger: TCTGTGTGGATGAGGAACGCACCTTAGAGGAGTGGG...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTGTGTCCAGTGGAAGCTaGGGGCAGGGTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTVSSGS*GQGSLL
Trigger: CAAAAGGGAACCCTGCCCCCAGCTTCCACTGGACAC...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGCAGACCTCCTCCTCATaGACACCCGGGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLQTSSS*TPGGPW
Trigger: CCAAGGACCCCCGGGTGTCCATGAGGAGGAGGTCTG...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAAAGGAGCGCCCTCTTaGACCACGACAGGGTCTAGG +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKKGAPS*TTTGSR
Trigger: CCTAGACCCTGTCGTGGTCCAAGAGGGCGCTCCTTT...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGGAGACACGTTTGTCTTaGGTGATGGGCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: LADPHIVPLLLKVVVASWETRLS*VMGSME
Trigger: CTCCATGGAGCCCATCACCCAAGACAAACGTGTCTC...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGCCTGCAGCATCACGTTaGAGAAGTATAGGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVPAASR*RSIGLR
Trigger: ACGGAGACCTATACTTCTCCAACGTGATGCTGCAGG...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGGAGACCCAGCTGATGGTGTGGGTGAAGTaGAAGCGGGCGTTACAACTG +
Preference number: 4 (lower is better)
Translates to: VLASLLVCLGVVAWETQLMVWVK*KRALQL
Trigger: CAGTTGTAACGCCCGCTTCCACTTCACCCACACCAT...CAGCTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTTTCTGCTGGATGGTGTaGGTGAAGTGGAAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLFCWMV*VKWKRA
Trigger: CGCCCGCTTCCACTTCACCCACACCATCCAGCAGAA...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGCTGCTCGCGGTGCCCTaGGGATACATGAAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWLLAVP*GYMKLG
Trigger: ACCAAGCTTCATGTATCCCCAGGGCACCGCGAGCAG...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGCTGCTCGCGGTGCCCTaGGGATACATGAAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQLLAVP*GYMKLG
Trigger: ACCAAGCTTCATGTATCCCCAGGGCACCGCGAGCAG...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTCCACGAAGCACCATCTaGCTGCTCGCGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WPRGGLNITACLRVLVWIPRSTI*LLAVPW
Trigger: CCAGGGCACCGCGAGCAGCCAGATGGTGCTTCGTGG...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTCTTGGCCTTATCAGATaGGAGGTCCCCACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLLGLIR*EVPTFL
Trigger: AAGAAAGGTGGGGACCTCCCATCTGATAAGGCCAAG...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGACTTGGCCTTATCAGATaGGAGGTCCCCACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRLGLIR*EVPTFL
Trigger: AAGAAAGGTGGGGACCTCCCATCTGATAAGGCCAAG...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGCCATCCACTGGACAGTaGGTTTGGGGTTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASPSTGQ*VWGFHW
Trigger: CCAATGGAAACCCCAAACCCACTGTCCAGTGGATGG...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGCCATTCACCATCCACTaGACAGTGGGTTTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEPFTIH*TVGLGF
Trigger: AAACCCCAAACCCACTGTCCAGTGGATGGTGAATGG...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGAACGGTTTGGGTTAGGTaGTGCCGATTGCAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRTVWVR*CRLQRF
Trigger: GAACCTTTGCAATCGGCACCACCTAACCCAAACCGT...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTGCCCTGCTGCTGATCTaGGTGTCCCGGAAGATGATG +
Preference number: 4 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTALLLI*VSRKMM
Trigger: CATCATCTTCCGGGACACCCAGATCAGCAGCAGGGC...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGTTGGAGGTGTTGCACTaGTACACAGCCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKLEVLH*YTALLL
Trigger: CAGCAGCAGGGCTGTGTACCAGTGCAACACCTCCAA...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCGGTAGCCATGCTCGTTaGAGGTGTTGCACTGGTACA +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGGSHAR*RCCTGT
Trigger: TGTACCAGTGCAACACCTCCAACGAGCATGGCTACC...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCCTTTGCCCAGGATGTTaGTGGCGACACAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRLCPGC*WRHRCR
Trigger: TCTACACCTGTGTCGCCACCAACATCCTGGGCAAAG...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp CTTGCTGTCTCTTCTGAGACACCCACAGGTTCTTCAGCAAGCTGCTCTCCCTCCCTTTGCCCAGGATGTTaGTGGCGACACAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: LAVSSETPTGSSASCSPSLCPGC*WRHRCR
Trigger: TCTACACCTGTGTCGCCACCAACATCCTGGGCAAAG...GGAGGGAGAGCAGCTTGCTGAAGAACCTGTGGGTGTCTCAGAAGAGACAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCCTTTGCCCAGGATGTTaGTGGCGACACAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGLCPGC*WRHRCR
Trigger: TCTACACCTGTGTCGCCACCAACATCCTGGGCAAAG...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCCTGCCACCCCAAAGATaGTCAGGGAGTCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTLPPQR*SGSRLP
Trigger: AGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAG...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGGGTCTGGCCGTCCTTTaGGCAGGGCAGCCAAACGGT +
Preference number: 4 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLGLAVL*AGQPNG
Trigger: ACCGTTTGGCTGCCCTGCCCAAAGGACGGCCAGACC...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATATGCCAGACCCCAGGTTaGAACTGGTCTTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEICQTPG*NWSSSN
Trigger: GTTTGAAGAAGACCAGTTCCAACCTGGGGTCTGGCA...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGGATGGGAGGCTGGGGTaGCTGCTCCCAACCTCGTTG +
Preference number: 4 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLDGRLG*LLPTSL
Trigger: CAACGAGGTTGGGAGCAGCCACCCCAGCCTCCCATC...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCGCTCGGATGGGAGGCTaGGGTGGCTGCTCCCAACCT +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPARMGG*GGCSQP
Trigger: AGGTTGGGAGCAGCCACCCCAGCCTCCCATCCGAGC...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGATAGGGCACGTAGACTaGGGTCTGCCCCACCACGTA +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWIGHVD*GLPHHV
Trigger: TACGTGGTGGGGCAGACCCCAGTCTACGTGCCCTAT...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTCTTCTTTTCTCGTACTaGGTACTTGCCGCCGCGACT +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVLLFSY*VLAAAT
Trigger: AGTCGCGGCGGCAAGTACCCAGTACGAGAAAAGAAG...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTAGCCATCCTCTTCCTTaGGGTCTTCAGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLSHPLP*GLQGQG
Trigger: CCCTTGGCCCTGAAGACCCCAAGGAAGAGGATGGCT...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGTTTTTGACCGTGTACTaGCCGATGAAGGAGCCGTCT +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVFLTVY*PMKEPS
Trigger: AGACGGCTCCTTCATCGGCCAGTACACGGTCAAAAA...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTGTGGTAGGTCTGCAGTaGTTTTGTCTCCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVVVGLQ*FCLPFS
Trigger: GGAGAAGGGGAGACAAAACCACTGCAGACCTACCAC...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGCCAGCTCTCCCACACTaGTGGCACCCGGGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PQCPTELAEKMISARDGRPALPH*WHPGLK
Trigger: CTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGG...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTCAGAGACATTGGGTCTaGAGGGGAAGATGCACAAAG +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLQRHWV*RGRCTK
Trigger: CTTTGTGCATCTTCCCCTCCAGACCCAATGTCTCTG...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTGCATTGGCCCAGAGGTaGTTTGAATATTACAGCCTG +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPALAQR*FEYYSL
Trigger: CAGGCTGTAATATTCAAACCACCTCTGGGCCAATGC...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTGAGAAAGGCATCCTTTaGAAATGCATTGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPEKGIL*KCIGPE
Trigger: CTCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTC...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCTACTCTGGACAGGGTaGGTGTGGCCCTCTATCTAC +
Preference number: 4 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSLLWTG*VWPSIY
Trigger: GTAGATAGAGGGCCACACCCACCCTGTCCAGAGTAG...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTTTGAGTGGCCACTTCTaGTCCTGCCGGAACACTTGC +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGLSGHF*SCRNTC
Trigger: GCAAGTGTTCCGGCAGGACCAGAAGTGGCCACTCAA...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCATGTACGGTGCAGTATaGAATGAGTGTCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: LNSSPANPRVAACMGPAAMYGAV*NECLRN
Trigger: GTTTCTCAGACACTCATTCCATACTGCACCGTACAT...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCTGCTTTCGGTGCAATaGGTACGCTGGCATGTACGG +
Preference number: 4 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSLLSVQ*VRWHVR
Trigger: CCGTACATGCCAGCGTACCCATTGCACCGAAAGCAG...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGCCTGCCTTCCTTGCTTaGGGAAAACTTAATTCTTCA +
Preference number: 4 (lower is better)
Translates to: MVKGGHWSDSARLAYASQPAFLA*GKLNSS
Trigger: TGAAGAATTAAGTTTTCCCCAAGCAAGGAAGGCAGG...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGCTTGGGAGACCCAGCTaGCAGGCAGTACTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWLGRPS*QAVLGN
Trigger: ATTGCCCAGTACTGCCTGCCAGCTGGGTCTCCCAAG...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTATGCTCCCAGCTCAATaGCCACTGTGTCCTAGCACT +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVMLPAQ*PLCPST
Trigger: AGTGCTAGGACACAGTGGCCATTGAGCTGGGAGCAT...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTGCCTTGGTGACCAGATaGACCAAGCTCTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSALVTR*TKLSLR
Trigger: TCTGAGGGAGAGCTTGGTCCATCTGGTCACCAAGGC...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAACTTGGAAGCACTGCTTaGCAACAGGGTTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQLGSTA*QQGCGL
Trigger: CAGACCACAACCCTGTTGCCAAGCAGTGCTTCCAAG...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGACAATGTTGGAATCTaGATCGCTATCCCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVDNVGI*IAIPWK
Trigger: CTTCCAAGGGATAGCGATCCAGATTCCAACATTGTC...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCCTGCTTGGTGATGGTTaGCGGCTGCGTCAGATCCAT +
Preference number: 4 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTLLGDG*RLRQIH
Trigger: ATGGATCTGACGCAGCCGCCAACCATCACCAAGCAG...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680427.1
CDS-3UTR CCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGGGTCACCAGGGAAGCTaGCTTGCTGTCTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: TKSIESSLGGGITTLSTVGHQGS*LAVSSE
Trigger: CTCAGAAGAGACAGCAAGCCAGCTTCCCTGGTGACC...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404076.5
CDS-3UTR CCA 90 bp TCGGACTTTAACTTCAGTGGGCGCAGCCCTGGGATAATCTTCTCCGGAGTAACCGGTCACCAGGGAAGCTaGCTTGCTGTCTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SDFNFSGRSPGIIFSGVTGHQGS*LAVSSE
Trigger: CTCAGAAGAGACAGCAAGCCAGCTTCCCTGGTGACC...GGTTACTCCGGAGAAGATTATCCCAGGGCTGCGCCCACTGAAGTTAAAGTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR CAA 72 bp ATGTGGGCTCAGTTGCACCTTGCAGGGCAAGCAATGTaGGCACTGGCTGATTTTCAGACCTGTGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: MWAQLHLAGQAM*ALADFQTCGHL
Trigger: GAGGTGACCACAGGTCTGAAAATCAGCCAGTGCCAACATTGCTTGCCCTGCAAGGTGCAACTGAGCCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 72 bp GGTCAGGGAAACTATGAATGCGCTATGTGGGCTCAGTaGCACCTTGCAGGGCAAGCAATGTTGGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: GQGNYECAMWAQ*HLAGQAMLALA
Trigger: AGCCAGTGCCAACATTGCTTGCCCTGCAAGGTGCAACTGAGCCCACATAGCGCATTCATAGTTTCCCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 72 bp TTTTCTCGTACTGGGTACTTGCCGCCGCGACTCCTCTaGATGAAACAGACGATGAGCAGGATCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: FSRTGYLPPRLL*MKQTMSRISTR
Trigger: CCTGGTGCTGATCCTGCTCATCGTCTGTTTCATCAAGAGGAGTCGCGGCGGCAAGTACCCAGTACGAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR TCA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTCTCCGTTATGGCCCTaGGAGACACGTTTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTSPLWP*ETRLSW
Trigger: CCAAGACAAACGTGTCTCTCAGGGCCATAACGGAGA...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGTGCCCTGGGGATACATaGAGCTTGGTGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LADPHIVPLLLKVVVASWCPGDT*SLVFFL
Trigger: CAGAAAGAACACCAAGCTTCATGTATCCCCAGGGCA...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CTTGCTGTCTCTTCTGAGACACCCACAGGTTCTTCAGCAAGCTGCTCTCCCTCCTCATGGGCGTCCACGTaGTCTCCATGTTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LAVSSETPTGSSASCSPSSWAST*SPCCSF
Trigger: GAAAGAACAACATGGAGATCACGTGGACGCCCATGA...GGAGGGAGAGCAGCTTGCTGAAGAACCTGTGGGTGTCTCAGAAGAGACAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR TCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCGAGTGTATCCAATCATaGTCCCATTTGGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTECIQS*SHLDAQ
Trigger: CTGAGCATCCAAATGGGATCATGATTGGATACACTC...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAACCGTGAACTTGGTCTaGTTGGGAGAGAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEITVNLV*LGEKFS
Trigger: GGAAAACTTCTCTCCCAATCAGACCAAGTTCACGGT...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCATCACTATAGTCAAATaGGCCATCCTCTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTITIVK*AILFLG
Trigger: CCCAAGGAAGAGGATGGCTCATTTGACTATAGTGAT...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCAGAGGTGGTTTaGATATTACAGCCTGTCTAC +
Preference number: 4 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMGPEVV*ILQPVY
Trigger: GTAGACAGGCTGTAATATTCAAACCACCTCTGGGCC...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTGGCCCAGAGGTGGTTTaGATATTACAGCCTGTCTAC +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVGPEVV*ILQPVY
Trigger: GTAGACAGGCTGTAATATTCAAACCACCTCTGGGCC...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTAGGGCAGGGGAGGAATaGGGAGCAAGAGGTAAACAC +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLRAGEE*GARGKH
Trigger: GTGTTTACCTCTTGCTCCTCATTCCTCCCCTGCCCT...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGCACAGTCACTGGCGTTaGAGTCCTTTCTATCAGTGC +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASHSHWR*SPFYQC
Trigger: GCACTGATAGAAAGGACTTCAACGCCAGTGACTGTG...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTAATTGGCTGAGAAGATaGTATCTGCTAGAGATGGAA +
Preference number: 4 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTANWLRR*YLLEME
Trigger: TTCCATCTCTAGCAGATATCATCTTCTCAGCCAATT...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAAATGTATACACCCCAATaGAAGGGCAGACCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQMYTPQ*KGRPAQ
Trigger: CTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACAT...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAATGTATACACCCCAATaGAAGGGCAGACCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQMYTPQ*KGRPAQ
Trigger: CTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACAT...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGAGGGGCATCACAACACTaGGTACGGTGCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRGASQH*VRCHLR
Trigger: CCTGAGGTGGCACCGTACTCAGTGTTGTGATGCCCC...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTGCATACAAAGAGCATTaGGTCCTCCCTAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTAYKEH*VLPRWG
Trigger: CCCCCACCTAGGGAGGACTCAATGCTCTTTGTATGC...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGGTGAGGACGTGTGTTaGGTGGCCACTTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQGEDVC*VATSGP
Trigger: AGGACCAGAAGTGGCCACTCAACACACGTCCTCACC...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGAGCAGCACCTTCGGTCTaGGAACTGCAGGTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRAAPSV*ELQVCE
Trigger: CTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGC...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAATTAGGTGGGGAGGATaGAGGCAGCACCTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPIRWGG*RQHLRS
Trigger: AGACCGAAGGTGCTGCCTTCATCCTCCCCACCTAAT...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGTGTCTGAGAAACTaGCTACTCTGCTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEECLRN*LLCSDP
Trigger: TGGATCTGAGCAGAGTAGTCAGTTTCTCAGACACTC...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGAAAAGGGGCTGCCTCCTaGATCCTGCAATCCCCACGC +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRKGAAS*ILQSPR
Trigger: GCGTGGGGATTGCAGGATTCAGGAGGCAGCCCCTTT...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGGAGACCCAGCTGCAAGGCAGGAAAAGATaGGTCCCATTCACCATCACC +
Preference number: 4 (lower is better)
Translates to: VLASLLVCLGVVAWETQLQGRKR*VPFTIT
Trigger: GGTGATGGTGAATGGGACTCATCTTTTCCTGCCTTG...CAGCTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAATGGTCAGGGAAACTATaGATGCGCTATGTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQWSGKL*MRYVGS
Trigger: TGAGCCCACATAGCGCATTCATAGTTTCCCTGACCA...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACGAGATGAAAGAACACTaGCTGGACAAGGAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHEMKEH*LDKESE
Trigger: TTCTGACTCCTTGTCCAGTCAGTGTTCTTTCATCTC...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGGGAAAGAACATGATGTaGGAGGGGTTAAAACAAGGT +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVGKNMM*EGLKQG
Trigger: ACCTTGTTTTAACCCCTCTCACATCATGTTCTTTCC...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTGTAAGAAAGGTAAAATaGTCACAACGAGAAACCCCT +
Preference number: 4 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPVRKVK*SQRETP
Trigger: AGGGGTTTCTCGTTGTGATCATTTTACCTTTCTTAC...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTAGCACTCAGCTTCTCTaGCTCATTCAGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVSTQLL*LIQPLP
Trigger: AGGAAGAGGCTGAATGAGGCAGAGAAGCTGAGTGCT...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGAGGCAGGGTTCCCTTTTaGTTCACACTCAATCAGGAT +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRGRVPF*FTLNQD
Trigger: ATCCTGATTGAGTGTGAAGCAAAAGGGAACCCTGCC...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGGCAGGGTTCCCTTTTaGTTCACACTCAATCAGGAT +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLGRVPF*FTLNQD
Trigger: ATCCTGATTGAGTGTGAAGCAAAAGGGAACCCTGCC...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTATTGGACAGGGCCGTaGCAAATTTGTTGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTYWTGP*QICCGR
Trigger: TCGCCCGCAACAAATTTGGCACGGCCCTGTCCAATA...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGTATTGGACAGGGCCGTaGCAAATTTGTTGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKYWTGP*QICCGR
Trigger: TCGCCCGCAACAAATTTGGCACGGCCCTGTCCAATA...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGTCGGTCTGCATGTCCTaGAGCATCACGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKSVCMS*SITLEK
Trigger: CTTCTCCAACGTGATGCTGCAGGACATGCAGACCGA...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp GTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGGAGACCCAGCTGGTGAAAGGGTTCTTCTaGTGGATGGTGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: VLASLLVCLGVVAWETQLVKGFF*WMVWVK
Trigger: CTTCACCCACACCATCCAGCAGAAGAACCCTTTCAC...CAGCTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCGTGAAAGGGTTCTTCTaGTGGATGGTGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGVKGFF*WMVWVK
Trigger: CTTCACCCACACCATCCAGCAGAAGAACCCTTTCAC...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCGTGAAAGGGTTCTTCTaGTGGATGGTGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRVKGFF*WMVWVK
Trigger: CTTCACCCACACCATCCAGCAGAAGAACCCTTTCAC...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTGAAGCACCATCTGGCTaGTCGCGGTGCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: WPRGGLNITACLRVLVWIEAPSG*SRCPGD
Trigger: ATCCCCAGGGCACCGCGAGCAGCCAGATGGTGCTTC...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCGTGTGCCGGATaGTGCCCATCTTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKRSCAG*CPSCWR
Trigger: CCTCCAACAAGATGGGCAGCATCCGGCACACGATCT...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCACGACACAGGTGTAGATaGCCTGGTCCTCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPRHRCR*PGPLCG
Trigger: TCCGCAAAGAGGACCAGGGCATCTACACCTGTGTCG...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACTTGGTTTTCAGCTTTaGCCAGGATGTTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQLGFQL*PGCWWR
Trigger: TCGCCACCAACATCCTGGGCAAAGCTGAAAACCAAG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTGCCCTGGTCCCGCTCTaGCACCCCAAAGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: WPRGGLNITACLRVLVWIALVPL*HPKDGQ
Trigger: CTGACCATCTTTGGGGTGGCAGAGCGGGACCAGGGC...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCATCGTCACTCTCCTGCTaGTTGATGGTGCCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPSSLSC*LMVPSR
Trigger: TCTGGACGGCACCATCAAGCAGCAGGAGAGTGACGA...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR GCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTGGCATCCTTTGGAAATaGATTGGCCCAGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVGILWK*IGPEVV
Trigger: AACCACCTCTGGGCCAATGCATTTCCAAAGGATGCC...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCAGTCCTTTCTATCAGTaGCCACTCCTGTTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: ERLKSEAVPMAADPFLGISPFYQ*PLLFLK
Trigger: TTTGAGGAACAGGAGTGGGCACTGATAGAAAGGACT...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTTTGCATAGGCTGCCCTaGTCTCCTGGAGATAGACGT +
Preference number: 4 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFLHRLP*SPGDRR
Trigger: ACGTCTATCTCCAGGAGAGCAGGGCAGCCTATGCAA...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGAAGAGTTACTGTAAGATaGCCAGCACTTTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRRVTVR*PALSSQ
Trigger: CTGGGAGGAAAGTGCTGGGCATCTTACAGTAACTCT...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCTATGTGGGCTCAGTTaGACCTTGCAGGGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSLCGLS*TLQGKQ
Trigger: TTGCTTGCCCTGCAAGGTGCAACTGAGCCCACATAG...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CAACAGGGTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTGGGTGTGAATGTGCTATGTCCCTaGTCCCTCCATCAAATGGGC +
Preference number: 4 (lower is better)
Translates to: QQGCGLLYVCEHAWALGVNVLCP*SLHQMG
Trigger: GCCCATTTGATGGAGGGAGCAGGGACATAGCACATT...CACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCACAACCCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGGGGAGCGGTGCCTTGTaGCGGCCTCCCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGGSGAL*RPPRNL
Trigger: CAGGTTCCTGGGAGGCCGGCACAAGGCACCGCTCCC...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
53% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTTTTAACTGGGCCTCCTaGACAGCACTCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVFNWAS*TALSFS
Trigger: AGAGAAGCTGAGTGCTGTCCAGGAGGCCCAGTTAAA...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGGCAGGCGGATCCTATTaGACAGGGCCGTGCCAAATT +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKAGGSY*TGPCQI
Trigger: AATTTGGCACGGCCCTGTCCAATAGGATCCGCCTGC...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGGAGACACGTTTGTCTTaGGTGATGGGCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKETRLS*VMGSME
Trigger: CTCCATGGAGCCCATCACCCAAGACAAACGTGTCTC...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp CTTGCTGTCTCTTCTGAGACACCCACAGGTTCTTCAGCAAGCTGCTCTCCCTCCCCTGCAGCATCACGTTaGAGAAGTATAGGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: LAVSSETPTGSSASCSPSPAASR*RSIGLR
Trigger: ACGGAGACCTATACTTCTCCAACGTGATGCTGCAGG...GGAGGGAGAGCAGCTTGCTGAAGAACCTGTGGGTGTCTCAGAAGAGACAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGATGGTGTGGGTGAAGTaGAAGCGGGCGTTACAACTG +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKMVWVK*KRALQL
Trigger: CAGTTGTAACGCCCGCTTCCACTTCACCCACACCAT...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAATTCTGCTGGATGGTGTaGGTGAAGTGGAAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQFCWMV*VKWKRA
Trigger: CGCCCGCTTCCACTTCACCCACACCATCCAGCAGAA...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACGGGATACATGAAGCTTaGTGTTCTTTCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHGIHEA*CSFCNS
Trigger: GGAGTTGCAGAAAGAACACCAAGCTTCATGTATCCC...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGACGGTTTGGGTTAGGTaGTGCCGATTGCAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: LADPHIVPLLLKVVVASWTVWVR*CRLQRF
Trigger: GAACCTTTGCAATCGGCACCACCTAACCCAAACCGT...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCACGGTTTGGGTTAGGTaGTGCCGATTGCAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGTVWVR*CRLQRF
Trigger: GAACCTTTGCAATCGGCACCACCTAACCCAAACCGT...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCATTGGAGGTGTTGCACTaGTACACAGCCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPLEVLH*YTALLL
Trigger: CAGCAGCAGGGCTGTGTACCAGTGCAACACCTCCAA...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTGGTAGCCATGCTCGTTaGAGGTGTTGCACTGGTACA +
Preference number: 4 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSGSHAR*RCCTGT
Trigger: TGTACCAGTGCAACACCTCCAACGAGCATGGCTACC...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGGGTAGCCATGCTCGTTaGAGGTGTTGCACTGGTACA +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKGSHAR*RCCTGT
Trigger: TGTACCAGTGCAACACCTCCAACGAGCATGGCTACC...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGATCACTCGAATGAGCTaGTTCCGGGGCGACAGCATC +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKITRMS*FRGDSI
Trigger: GATGCTGTCGCCCCGGAACCAGCTCATTCGAGTGAT...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTATCACTCGAATGAGCTaGTTCCGGGGCGACAGCATC +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLITRMS*FRGDSI
Trigger: GATGCTGTCGCCCCGGAACCAGCTCATTCGAGTGAT...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGATCGCAGTGTGGGGATaGGAGACCCAAAGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKIAVWG*ETQRKG
Trigger: GCCCTTTCTTTGGGTCTCCCATCCCCACACTGCGAT...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGACCTCCAGGCGGACTTaGTTTTCAGCTTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKTSRRT*FSALPR
Trigger: CCTGGGCAAAGCTGAAAACCAAGTCCGCCTGGAGGT...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGACTCCAGCTGCACCGTaGTGCCCCTTCTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: PQCPTELAEKMISARDGRTPAAP*CPFWPP
Trigger: AGGTGGCCAGAAGGGGCACCACGGTGCAGCTGGAGT...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCACTCCAGCTGCACCGTaGTGCCCCTTCTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPTPAAP*CPFWPP
Trigger: AGGTGGCCAGAAGGGGCACCACGGTGCAGCTGGAGT...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTTGCCAGACCCCAGGTTaGAACTGGTCTTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVCQTPG*NWSSSN
Trigger: GTTTGAAGAAGACCAGTTCCAACCTGGGGTCTGGCA...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGCCATGTTGTTCTTTCTaGTCCCCTCTCCCTTCACGT +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASPCCSF*SPLPSR
Trigger: ACGTGAAGGGAGAGGGGACCAGAAAGAACAACATGG...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGCCAATGAACCAGCCCTaGGTGGCGATGTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: LTSEEYSTLKARCVTKQEPMNQP*VAMSAW
Trigger: CCAAGCGGACATCGCCACCCAGGGCTGGTTCATTGG...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GCTCTGCCACCCCAAAGATGGTCAGGGAGTCGTCTTCCTTCTTCATCCTGTTTCCTTCTTTTCTCGTACTaGGTACTTGCCGCCGCGACT +
Preference number: 4 (lower is better)
Translates to: ALPPQRWSGSRLPSSSCFLLFSY*VLAAAT
Trigger: AGTCGCGGCGGCAAGTACCCAGTACGAGAAAAGAAG...GAAACAGGATGAAGAAGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGTTTTTGACCGTGTACTaGCCGATGAAGGAGCCGTCT +
Preference number: 4 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMFLTVY*PMKEPS
Trigger: AGACGGCTCCTTCATCGGCCAGTACACGGTCAAAAA...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAATTTTTGACCGTGTACTaGCCGATGAAGGAGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQFLTVY*PMKEPS
Trigger: AGACGGCTCCTTCATCGGCCAGTACACGGTCAAAAA...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTGTGGCTGTGCCTGGGTaGGCTCCGTTAGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: WPRGGLNITACLRVLVWIVAVPG*APLGQR
Trigger: TCTCTGGCCTAACGGAGCCCACCCAGGCACAGCCAC...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTAAGTGGTGGCTGTGCCTaGGTGGGCTCCGTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: MHWPRGGLNITACLRVLVSGGCA*VGSVRP
Trigger: TGGCCTAACGGAGCCCACCCAGGCACAGCCACCACT...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCACTGGTCCTCACAGCTTaGCAGACCCCCATATCGTAC +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPLVLTA*QTPISY
Trigger: GTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp TCTCCCATTGACCACAACCATCTCCAGCTTGTAGTTACTGTAGGGGAAGAGGCGCTGGTCCTCACAGCTTaGCAGACCCCCATATCGTAC +
Preference number: 4 (lower is better)
Translates to: SPIDHNHLQLVVTVGEEALVLTA*QTPISY
Trigger: GTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG...CGCCTCTTCCCCTACAGTAACTACAAGCTGGAGATGGTTGTGGTCAATGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGGCTCTCCCACACTGGTaGCACCCGGGGCTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGALPHW*HPGLKG
Trigger: CCCCTTCAGCCCCGGGTGCCACCAGTGTGGGAGAGC...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTAGAAAACAGAGACATTaGGTCTGGAGGGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLRKQRH*VWRGRC
Trigger: GCATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCT...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGAAGAAAACAGAGACATTaGGTCTGGAGGGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRRKQRH*VWRGRC
Trigger: GCATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCT...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGAGAAAACAGAGACATTaGGTCTGGAGGGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSERKQRH*VWRGRC
Trigger: GCATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCT...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATCCTGTCTACGTGTTCTaGTATGGATTCAATCCTTTT +
Preference number: 4 (lower is better)
Translates to: GLVGGLVATGPHSLADPHPVYVF*YGFNPF
Trigger: AAAAGGATTGAATCCATACCAGAACACGTAGACAGG...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGGAGACCCAGCTGCCTCTATCTACATCCTaGGTTTCACCAGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VLASLLVCLGVVAWETQLPLSTS*VSPVRR
Trigger: CCTCCTCACTGGTGAAACCCAGGATGTAGATAGAGG...CAGCTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACCTCTATCTACATCCTaGGTTTCACCAGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQPLSTS*VSPVRR
Trigger: CCTCCTCACTGGTGAAACCCAGGATGTAGATAGAGG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGAGGTGCCCTCTACTCTaGACAGGGTGGGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PQCPTELAEKMISARDGRRCPLL*TGWVWP
Trigger: GGGCCACACCCACCCTGTCCAGAGTAGAGGGCACCT...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCTGGGCCCTGGCCACGTaGACAGGTGCCCTCTACTCT +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPWALAT*TGALYS
Trigger: AGAGTAGAGGGCACCTGTCCACGTGGCCAGGGCCCA...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTAGACCTGCTCAGTCTTaGGGCAAGTCCCCATCCACA +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLRPAQS*GKSPST
Trigger: TGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCT...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCGGCCTTAGTTCAGACTaGATTTCAGATTATTTGCTG +
Preference number: 4 (lower is better)
Translates to: LNSSPANPRVAACMGPAAGLSSD*ISDYLL
Trigger: CAGCAAATAATCTGAAATCCAGTCTGAACTAAGGCC...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTTATGAATGCGCTATGTaGGCTCAGTTGCACCTTGCA +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLYECAM*AQLHLA
Trigger: TGCAAGGTGCAACTGAGCCCACATAGCGCATTCATA...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGCACGCAACTTGGATGTaGACTAACCCTCTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: LADPHIVPLLLKVVVASWHATWM*TNPLQD
Trigger: GTCTTGGAGAGGGTTAGTCCACATCCAAGTTGCGTG...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGCACGCAACTTGGATGTaGACTAACCCTCTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASHATWM*TNPLQD
Trigger: GTCTTGGAGAGGGTTAGTCCACATCCAAGTTGCGTG...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCCCAAGGTGTCATGAGTaGGGAGCGGTGCCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSPRCHE*GAVPCA
Trigger: GGCACAAGGCACCGCTCCCCACTCATGACACCTTGG...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp AGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTGCTCTAGGAATGCTAGGAGATaGTCAAGGGAGGGCACTGGT +
Preference number: 4 (lower is better)
Translates to: RLRKQDCFSSHTVVLDCSRNARR*SREGTG
Trigger: ACCAGTGCCCTCCCTTGACCATCTCCTAGCATTCCT...AGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGTGTGGCTCTCCTGGATaGTTCTCCTTTCTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEECGSPG*FSFLSD
Trigger: ATCAGAGAGAAAGGAGAACCATCCAGGAGAGCCACA...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
3UTR CAA 72 bp GGGGCCAGGGGAGGCATATGGCGAGAAAGGCATCCTTaGGAAATGCATTGGCCCAGAGGTGGTTTGAATATT +
Preference number: 4 (lower is better)
Translates to: GARGGIWRERHP*EMHWPRGGLNI
Trigger: AATATTCAAACCACCTCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTCGCCATATGCCTCCCCTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CAA 72 bp CCAAGGGGAACATCCTTCTTTTCTCGTACTGGGTACTaGCCGCCGCGACTCCTCTTGATGAAACAGACGATG +
Preference number: 4 (lower is better)
Translates to: PRGTSFFSRTGY*PPRLLLMKQTM
Trigger: CATCGTCTGTTTCATCAAGAGGAGTCGCGGCGGCAAGTACCCAGTACGAGAAAAGAAGGATGTTCCCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
3UTR CAA 72 bp GAGCTTTCGTTGCCCTCTGTTTCCTCCTTGTCCTTTTaGACCGTGTACTGGCCGATGAAGGAGCCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ELSLPSVSSLSF*TVYWPMKEPSS
Trigger: TGAAGACGGCTCCTTCATCGGCCAGTACACGGTCAAAAAGGACAAGGAGGAAACAGAGGGCAACGAAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR TCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGGATGTGATCCTTCGCTaGCTGCTTGGTGATGGTTGG +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKDVILR*LLGDGW
Trigger: CCAACCATCACCAAGCAGTCAGCGAAGGATCACATC...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGTTGCGGGCGAAGCACTaGTATTCCCCCTCATATTCC +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQLRAKH*YSPSYS
Trigger: GGAATATGAGGGGGAATATCAGTGCTTCGCCCGCAA...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAATGCTCATCCAGAAGATaGCCGGGGATGGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQCSSRR*PGMEVQ
Trigger: CTGGACTTCCATCCCCGGTCATCTTCTGGATGAGCA...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAAAGAATCACTCGAATaGGCTGGTTCCGGGGCGACA +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKKESLE*AGSGAT
Trigger: TGTCGCCCCGGAACCAGCTCATTCGAGTGATTCTTT...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp CAGGTTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGTCCTGGTGGGGTCTTTaGCCTCCAGGCGGACTTGGT +
Preference number: 4 (lower is better)
Translates to: QVQTTLLAQFWAMVSYQQSWWGL*PPGGLG
Trigger: ACCAAGTCCGCCTGGAGGTCAAAGACCCCACCAGGA...CTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTGATCCCATTCCAGGTTaGTTGTCTCCAGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLDPIPG*LSPGWA
Trigger: AGCCCAACCTGGAGACAATCAACCTGGAATGGGATC...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAGATCCCATTCCAGGTTaGTTGTCTCCAGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPDPIPG*LSPGWA
Trigger: AGCCCAACCTGGAGACAATCAACCTGGAATGGGATC...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGGAGTGTATCCAATCATaGTCCCATTTGGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVECIQS*SHLDAQ
Trigger: CTGAGCATCCAAATGGGATCATGATTGGATACACTC...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGGGTAAAGCGGTAGCGTaGCACGGGGTCCGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LTSEEYSTLKARCVTKQEGKAVA*HGVRSL
Trigger: CAAAGAACGGACCCCGTGTCACGCTACCGCTTTACC...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTATCACTATAGTCAAATaGGCCATCCTCTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPITIVK*AILFLG
Trigger: CCCAAGGAAGAGGATGGCTCATTTGACTATAGTGAT...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CCCACAGAACAGCAGCCTGAGAGAGGGCTAACAGCATTTTCTTCATACACAAAGCACTCTCCTGCTGCTTaGTGGTGCCGTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: PTEQQPERGLTAFSSYTKHSPAA*WCRPEM
Trigger: CATCTCTGGACGGCACCATCAAGCAGCAGGAGAGTG...CTTTGTGTATGAAGAAAATGCTGTTAGCCCTCTCTCAGGCTGCTGTTCTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGCACTCTCCTGCTGCTTaGTGGTGCCGTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: LTSEEYSTLKARCVTKQEHSPAA*WCRPEM
Trigger: CATCTCTGGACGGCACCATCAAGCAGCAGGAGAGTG...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CAGGTTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGCCGTCTTCATTGAACTaGCCCTCGCCACCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: QVQTTLLAQFWAMVSYQQPSSLN*PSPPSP
Trigger: TGGCGAGGGTGGCGAGGGTCAGTTCAATGAAGACGG...CTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TCTCCCATTGACCACAACCATCTCCAGCTTGTAGTTACTGTAGGGGAAGAGGCGTCGTACCCTTGTTACTaGAGGTGGTGGTGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: SPIDHNHLQLVVTVGEEASYPCY*RWWWLR
Trigger: ACGAAGCCACCACCACCTTCAGTAACAAGGGTACGA...CGCCTCTTCCCCTACAGTAACTACAAGCTGGAGATGGTTGTGGTCAATGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR TCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGGCCCAGCTCAGCAACTaGCAAGGCCGAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGAQLSN*QGRGRG
Trigger: CCCTCTGCCTCGGCCTTGTCAGTTGCTGAGCTGGGC...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTCACAGTCACTGGCGTTaGAGTCCTTTCTATCAGTGC +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGHSHWR*SPFYQC
Trigger: GCACTGATAGAAAGGACTTCAACGCCAGTGACTGTG...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCCAAGACCAGACACCTaGTTTTCTTCTGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSPRPDT*FSSAGG
Trigger: ACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGG...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTATGTATACACCCCAATaGAAGGGCAGACCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFMYTPQ*KGRPAQ
Trigger: CTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACAT...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCACACCTCAGGGTCCCCTaGTATGTATACACCCCAATG +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPHLRVP*YVYTPM
Trigger: CATTGGGGTGTATACATATCAGGGGACCCTGAGGTG...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAACGGTGCAGTATGGAATaGGTGTCTGAGAAACTGACT +
Preference number: 4 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQRCSME*VSEKLT
Trigger: AGTCAGTTTCTCAGACACTCATTCCATACTGCACCG...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CAGGTTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAAAGGGGCTGCCTCCTaGATCCTGCAATCCCCACGC +
Preference number: 4 (lower is better)
Translates to: QVQTTLLAQFWAMVSYQQKGAAS*ILQSPR
Trigger: GCGTGGGGATTGCAGGATTCAGGAGGCAGCCCCTTT...CTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CAACAGGGTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTGGGTGTGAATGTTGGCACTGGCTaGTTTTCAGACCTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: QQGCGLLYVCEHAWALGVNVGTG*FSDLWS
Trigger: TGACCACAGGTCTGAAAATCAGCCAGTGCCAACATT...CACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCACAACCCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAGCTTGCTGTCTCTTCTaGGACACCCACAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPACCLF*DTHRFF
Trigger: GAAGAACCTGTGGGTGTCTCAGAAGAGACAGCAAGC...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGATCCTTCTTTTCCCTaGAAGTTGGCCTCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPDPSFP*KLASEK
Trigger: TTTCTCTGAGGCCAACTTTCAGGGAAAAGAAGGATC...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404076.5
CDS-3UTR GCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGGGCAGGGTTCCCTTTTaGTTCACACTCAATCAGGAT +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASGRVPF*FTLNQD
Trigger: ATCCTGATTGAGTGTGAAGCAAAAGGGAACCCTGCC...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCGGCAGGGTTCCCTTTTaGTTCACACTCAATCAGGAT +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRGRVPF*FTLNQD
Trigger: ATCCTGATTGAGTGTGAAGCAAAAGGGAACCCTGCC...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGCCGTGCCAAATTTGTTaGGGGCGAAGCACTGATATT +
Preference number: 4 (lower is better)
Translates to: LADPHIVPLLLKVVVASWPCQIC*GRSTDI
Trigger: AATATCAGTGCTTCGCCCGCAACAAATTTGGCACGG...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACCGTGCCAAATTTGTTaGGGGCGAAGCACTGATATT +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQPCQIC*GRSTDI
Trigger: AATATCAGTGCTTCGCCCGCAACAAATTTGGCACGG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCGGAGATTTAGACACCTaGAGGCGGATCCTATTGGAC +
Preference number: 4 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTGDLDT*RRILLD
Trigger: GTCCAATAGGATCCGCCTGCAGGTGTCTAAATCTCC...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGAGATTTAGACACCTaGAGGCGGATCCTATTGGAC +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGGDLDT*RRILLD
Trigger: GTCCAATAGGATCCGCCTGCAGGTGTCTAAATCTCC...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCATCGGTCTGCATGTCCTaGAGCATCACGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPSVCMS*SITLEK
Trigger: CTTCTCCAACGTGATGCTGCAGGACATGCAGACCGA...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGTGAAAGGGTTCTTCTaGTGGATGGTGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGVKGFF*WMVWVK
Trigger: CTTCACCCACACCATCCAGCAGAAGAACCCTTTCAC...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGCTTGGTGTTCTTTCTaGAACTCCTCGGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLAWCSF*NSSGGE
Trigger: CTCACCACCCGAGGAGTTGCAGAAAGAACACCAAGC...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCTCCAGGTTGCTTCCTTaGCCATTCTTAAACCATCGC +
Preference number: 4 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRSRLLP*PFLNHR
Trigger: GCGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGA...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCTCCAGGTTGCTTCCTTaGCCATTCTTAAACCATCGC +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGSRLLP*PFLNHR
Trigger: GCGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGA...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGCTTGGTTTTCAGCTTTaGCCAGGATGTTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKLGFQL*PGCWWR
Trigger: TCGCCACCAACATCCTGGGCAAAGCTGAAAACCAAG...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCTTCAGGGAGGGGTCGTaGTTCACCCGACACTCCAGC +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPFREGS*FTRHSS
Trigger: GCTGGAGTGTCGGGTGAAGCACGACCCCTCCCTGAA...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTTACTTGGAATGGTCATaGCAGACCCCAGGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFYLEWS*QTPGWN
Trigger: GTTCCAACCTGGGGTCTGGCATGACCATTCCAAGTA...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTAGTCTCCAGGTTGGGCTaGCGGACTCGGAAACGCCTA +
Preference number: 4 (lower is better)
Translates to: MHWPRGGLNITACLRVLVVSRLG*RTRKRL
Trigger: TAGGCGTTTCCGAGTCCGGCAGCCCAACCTGGAGAC...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR GCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGTCCCCAGAGCCCACCTaGGTCCTGGCGCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGSPEPT*VLALRV
Trigger: TACCCTCAGCGCCAGGACGCAGGTGGGCTCTGGGGA...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR GCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGACCGGGCCCGAAATTGTaGTTCCAGGTGATGTTGGCC +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRPGPKL*FQVMLA
Trigger: GGCCAACATCACCTGGAAGCACAATTTCGGGCCCGG...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTGGCATCCTTTGGAAATaGATTGGCCCAGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSGILWK*IGPEVV
Trigger: AACCACCTCTGGGCCAATGCATTTCCAAAGGATGCC...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGCGTCTTCAGAGTCAATaGAGCTCACATCTTAGATAT +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVRLQSQ*SSHLRY
Trigger: ATATCTAAGATGTGAGCTGCATTGACTCTGAAGACG...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTCACCAGCAAAGCTTTTaGATCACAGGGTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTHQQSF*ITGFHL
Trigger: GAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTCACCAGCAAAGCTTTTaGATCACAGGGTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVHQQSF*ITGFHL
Trigger: GAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTATGGAAGGGGAGCAGTaGCTTATGCCCCAAACACAC +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLMEGEQ*LMPQTH
Trigger: GTGTGTTTGGGGCATAAGGCACTGCTCCCCTTCCAT...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAATGGAAGGGGAGCAGTaGCTTATGCCCCAAACACAC +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPMEGEQ*LMPQTH
Trigger: GTGTGTTTGGGGCATAAGGCACTGCTCCCCTTCCAT...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGTCAAATCGGAGGCTGTaGCCATGGCAGCTGATCCAT +
Preference number: 4 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLSNRRL*PWQLIH
Trigger: ATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGA...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGATGCACTGTGATAAGCTaGCCCTCAGGCGTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRCTVIS*PSGVQA
Trigger: TGCCTGGACGCCTGAGGGGCAGCTTATCACAGTGCA...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR GCA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTCTGCCTCCTGAATCCTaGAATCCCCACGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: WPRGGLNITACLRVLVWILPPES*NPHASA
Trigger: CGCTGAGGCGTGGGGATTGCAGGATTCAGGAGGCAG...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCGCGCCGATGGCATGGTaGTGTCCTGGCTTCACTGTT +
Preference number: 4 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSAPMAW*CPGFTV
Trigger: AACAGTGAAGCCAGGACAGCACCATGCCATCGGCGC...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTCAGGGAAACTATGAATaGGCTATGTGGGCTCAGTTG +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVQGNYE*AMWAQL
Trigger: CAACTGAGCCCACATAGCGCATTCATAGTTTCCCTG...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGAAACAGGGTTGTGGTCTaGTGTATGTATGTGAGCATG +
Preference number: 4 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRNRVVV*CMYVSM
Trigger: CATGCTCACATACATACAGCAGACCACAACCCTGTT...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGGCTCTCTCTAGGTGCTaGCAACAGGAATTACCTAAA +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEEALSRC*QQELPK
Trigger: TTTAGGTAATTCCTGTTGGCAGCACCTAGAGAGAGC...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGGCTTGGTGTTCTTTCTaGAACTCCTCGGGCACTGTA +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKAWCSF*NSSGTV
Trigger: TACAGTGCCCGAGGAGTTGCAGAAAGAACACCAAGC...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680427.1
CDS-3UTR CCA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTTTTAACTGGGCCTCCTaGACAGCACTCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSFNWAS*TALSFS
Trigger: AGAGAAGCTGAGTGCTGTCCAGGAGGCCCAGTTAAA...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCTCGAGCCGCTTTAACTaGGCCTCCTGGACAGCACTC +
Preference number: 4 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSSSRFN*ASWTAL
Trigger: GAGTGCTGTCCAGGAGGCCCAGTTAAAGCGGCTCGA...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAACTGCTTGGTGATGGTTaGCGGCTGCGTCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQLLGDG*RLRQLI
Trigger: AATGAGCTGACGCAGCCGCCAACCATCACCAAGCAG...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGGAGACACGTTTGTCTTaGGTGATGGGCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKETRLS*VMGSME
Trigger: CTCCATGGAGCCCATCACCCAAGACAAACGTGTCTC...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGATGGTGTGGGTGAAGTaGAAGCGGGCGTTACAACTG +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQMVWVK*KRALQL
Trigger: CAGTTGTAACGCCCGCTTCCACTTCACCCACACCAT...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTCTTGGCCTTATCAGATaGGAGGTCCCCACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGLGLIR*EVPTFL
Trigger: AAGAAAGGTGGGGACCTCCCATCTGATAAGGCCAAG...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGCTTGGCCTTATCAGATaGGAGGTCCCCACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKLGLIR*EVPTFL
Trigger: AAGAAAGGTGGGGACCTCCCATCTGATAAGGCCAAG...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTTGCTGCCCATCTTGTTaGAGGCCAGGCAGAAATACT +
Preference number: 4 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFCCPSC*RPGRNT
Trigger: AGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCA...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGCTGCCCATCTTGTTaGAGGCCAGGCAGAAATACT +
Preference number: 4 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTCCPSC*RPGRNT
Trigger: AGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCA...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGCCATCCACTGGACAGTaGGTTTGGGGTTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKPSTGQ*VWGFHW
Trigger: CCAATGGAAACCCCAAACCCACTGTCCAGTGGATGG...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGACGGTTTGGGTTAGGTaGTGCCGATTGCAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKTVWVR*CRLQRF
Trigger: GAACCTTTGCAATCGGCACCACCTAACCCAAACCGT...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGGCCCTGCTGCTGATCTaGGTGTCCCGGAAGATGATG +
Preference number: 4 (lower is better)
Translates to: LTSEEYSTLKARCVTKQEALLLI*VSRKMM
Trigger: CATCATCTTCCGGGACACCCAGATCAGCAGCAGGGC...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGCTTTGCCCAGGATGTTaGTGGCGACACAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWLCPGC*WRHRCR
Trigger: TCTACACCTGTGTCGCCACCAACATCCTGGGCAAAG...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTCCATGTTGTTCTTTCTaGTCCCCTCTCCCTTCACGT +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGPCCSF*SPLPSR
Trigger: ACGTGAAGGGAGAGGGGACCAGAAAGAACAACATGG...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGTCCCGGAGGTGGTGGTaGGAGGACTCTCCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGSRRWW*EDSPWW
Trigger: CCACCACGGAGAGTCCTCCCACCACCACCTCCGGGA...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAGTGGTAGGTCTGCAGTaGTTTTGTCTCCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPVVGLQ*FCLPFS
Trigger: GGAGAAGGGGAGACAAAACCACTGCAGACCTACCAC...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATTGGGAGGGGGCTTGTaGGTGGCTTGGTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: MHWPRGGLNITACLRVLVLGGGL*VAWWLL
Trigger: CAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAA...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCTTGGGAGGGGGCTTGTaGGTGGCTTGGTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPLGGGL*VAWWLL
Trigger: CAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAA...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGCTACGTGTTCTGGTATaGATTCAATCCTTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVLRVLV*IQSFLP
Trigger: AGGCAAAAAGGATTGAATCCATACCAGAACACGTAG...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTCTGATTTTCTTCTGCTaGAGGTACACAGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVLIFFC*RYTVTG
Trigger: GCCAGTGACTGTGTACCTCCAGCAGAAGAAAATCAG...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGAGGCTAGGTACCTTTaGTTTCAAAAATGCATTAGG +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVEARYL*FQKCIR
Trigger: CCTAATGCATTTTTGAAACCAAAGGTACCTAGCCTC...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCTTCAAACAACCTTATTaGCTCAGTTCTGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTFKQPY*LSSGLW
Trigger: CCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CCCACAGAACAGCAGCCTGAGAGAGGGCTAACAGCATTTTCTTCATACACAAAGGGACAGTACAGAGCCTaGCAGGACACTGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: PTEQQPERGLTAFSSYTKGQYRA*QDTGTR
Trigger: CCTCGTTCCAGTGTCCTGCCAGGCTCTGTACTGTCC...CTTTGTGTATGAAGAAAATGCTGTTAGCCCTCTCTCAGGCTGCTGTTCTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGACTTGGGAGACCCAGCTaGCAGGCAGTACTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRLGRPS*QAVLGN
Trigger: ATTGCCCAGTACTGCCTGCCAGCTGGGTCTCCCAAG...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGGCCTTAGTTCAGACTaGATTTCAGATTATTTGCTG +
Preference number: 4 (lower is better)
Translates to: PVTNRKGERVPRPRADSVGLSSD*ISDYLL
Trigger: CAGCAAATAATCTGAAATCCAGTCTGAACTAAGGCC...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCGTCAAGGGAGGGCACTaGTCTGACTCTGCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPVKGGH*SDSARL
Trigger: AAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGAC...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAATGGCCATGGGCAGAATaGACCGAGATGCCCTCACTT +
Preference number: 4 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQWPWAE*TEMPSL
Trigger: AAGTGAGGGCATCTCGGTCCATTCTGCCCATGGCCA...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGTGCACCCTGTGGCCATaGGCAGAATGGACCGAGATG +
Preference number: 4 (lower is better)
Translates to: LTSEEYSTLKARCVTKQECTLWP*AEWTEM
Trigger: CATCTCGGTCCATTCTGCCCATGGCCACAGGGTGCA...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTGGTCCTTGGCGATGTTaGAGAATCTGCTGTTTCGTG +
Preference number: 4 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTGPWRC*RICCFV
Trigger: CACGAAACAGCAGATTCTTCAACATCGCCAAGGACC...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGTGCCCTGGGGATACATaGAGCTTGGTGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKCPGDT*SLVFFL
Trigger: CAGAAAGAACACCAAGCTTCATGTATCCCCAGGGCA...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGTGCCCTGGGGATACATaGAGCTTGGTGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQCPGDT*SLVFFL
Trigger: CAGAAAGAACACCAAGCTTCATGTATCCCCAGGGCA...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTTCATGGGCGTCCACGTaGTCTCCATGTTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTSWAST*SPCCSF
Trigger: GAAAGAACAACATGGAGATCACGTGGACGCCCATGA...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTACCGTGAACTTGGTCTaGTTGGGAGAGAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFTVNLV*LGEKFS
Trigger: GGAAAACTTCTCTCCCAATCAGACCAAGTTCACGGT...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp CAGGTTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGGGTAAAGCGGTAGCGTaGCACGGGGTCCGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: QVQTTLLAQFWAMVSYQQGKAVA*HGVRSL
Trigger: CAAAGAACGGACCCCGTGTCACGCTACCGCTTTACC...CTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTCTGGTGACTCCTCTGTaGCGGCTTCCCCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RLITDRLILVSETILFVFLVTPL*RLPQSP
Trigger: TGGGCTCTGGGGAAGCCGTCACAGAGGAGTCACCAG...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAAATCACTATAGTCAAATaGGCCATCCTCTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQITIVK*AILFLG
Trigger: CCCAAGGAAGAGGATGGCTCATTTGACTATAGTGAT...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGATCACTATAGTCAAATaGGCCATCCTCTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASITIVK*AILFLG
Trigger: CCCAAGGAAGAGGATGGCTCATTTGACTATAGTGAT...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR TCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCAGGCTCCCTCCAGCTaGGCTCAGCCACGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILQAPSS*AQPRLQ
Trigger: CTGGAGCCGTGGCTGAGCTCAGCTGGAGGGAGCCTG...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTCACAGTCACTGGCGTTaGAGTCCTTTCTATCAGTGC +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLHSHWR*SPFYQC
Trigger: GCACTGATAGAAAGGACTTCAACGCCAGTGACTGTG...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGCGGTGCAGTATGGAATaGGTGTCTGAGAAACTGACT +
Preference number: 4 (lower is better)
Translates to: TKSIESSLGGGITTLSTVRCSME*VSEKLT
Trigger: AGTCAGTTTCTCAGACACTCATTCCATACTGCACCG...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGGAGACCCAGCTGGCCTTGGTCTCCTCTTaGCATATCAAGCTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: VLASLLVCLGVVAWETQLALVSS*HIKLFV
Trigger: AACAAAGAGCTTGATATGTCAAGAGGAGACCAAGGC...CAGCTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTGCTTCAGGTGAGGCCTaGGACACTGTTTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: WPRGGLNITACLRVLVWIASGEA*DTVWWT
Trigger: CGTCCACCAAACAGTGTCTCAGGCCTCACCTGAAGC...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAAGCTCAAGGGGAGTGTaGAGAGGTTGGCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQSSRGV*RGWQRA
Trigger: AGCTCTTTGCCAACCTCTTCACACTCCCCTTGAGCT...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTAGCACTCAGCTTCTCTaGCTCATTCAGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLSTQLL*LIQPLP
Trigger: AGGAAGAGGCTGAATGAGGCAGAGAAGCTGAGTGCT...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTCCGTGCCAAATTTGTTaGGGGCGAAGCACTGATATT +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGPCQIC*GRSTDI
Trigger: AATATCAGTGCTTCGCCCGCAACAAATTTGGCACGG...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR GCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGCCGTGCCAAATTTGTTaGGGGCGAAGCACTGATATT +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKPCQIC*GRSTDI
Trigger: AATATCAGTGCTTCGCCCGCAACAAATTTGGCACGG...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp TCGGACTTTAACTTCAGTGGGCGCAGCCCTGGGATAATCTTCTCCGGAGTAACCCCGTGCCAAATTTGTTaGGGGCGAAGCACTGATATT +
Preference number: 4 (lower is better)
Translates to: SDFNFSGRSPGIIFSGVTPCQIC*GRSTDI
Trigger: AATATCAGTGCTTCGCCCGCAACAAATTTGGCACGG...GGTTACTCCGGAGAAGATTATCCCAGGGCTGCGCCCACTGAAGTTAAAGTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR GCA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTGGAGATTTAGACACCTaGAGGCGGATCCTATTGGAC +
Preference number: 4 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTGDLDT*RRILLD
Trigger: GTCCAATAGGATCCGCCTGCAGGTGTCTAAATCTCC...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGGAAGCACCATCTGGCTaGTCGCGGTGCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGEAPSG*SRCPGD
Trigger: ATCCCCAGGGCACCGCGAGCAGCCAGATGGTGCTTC...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGACCTTTCTTGTACCATaGGATGTCTGGTGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKTFLVP*DVWCWD
Trigger: GTCCCAACACCAGACATCGCATGGTACAAGAAAGGT...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCCATAAACATGGTAGTTaGCACCATCCAGGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGHKHGS*HHPGCF
Trigger: GAAGCAACCTGGATGGTGGCAACTACCATGTTTATG...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTCTTGGTTTTCAGCTTTaGCCAGGATGTTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLLGFQL*PGCWWR
Trigger: TCGCCACCAACATCCTGGGCAAAGCTGAAAACCAAG...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp CCCACAGAACAGCAGCCTGAGAGAGGGCTAACAGCATTTTCTTCATACACAAAGTCGTCACTCTCCTGCTaGTTGATGGTGCCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PTEQQPERGLTAFSSYTKSSLSC*LMVPSR
Trigger: TCTGGACGGCACCATCAAGCAGCAGGAGAGTGACGA...CTTTGTGTATGAAGAAAATGCTGTTAGCCCTCTCTCAGGCTGCTGTTCTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTCGTCTTCAGAGTCAATaGAGCTCACATCTTAGATAT +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPRLQSQ*SSHLRY
Trigger: ATATCTAAGATGTGAGCTGCATTGACTCTGAAGACG...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCCGTCTTCAGAGTCAATaGAGCTCACATCTTAGATAT +
Preference number: 4 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIRLQSQ*SSHLRY
Trigger: ATATCTAAGATGTGAGCTGCATTGACTCTGAAGACG...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTAGTCCTTTCTATCAGTaGCCACTCCTGTTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTSPFYQ*PLLFLK
Trigger: TTTGAGGAACAGGAGTGGGCACTGATAGAAAGGACT...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACCAGCAAAGCTTTTaGATCACAGGGTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSHQQSF*ITGFHL
Trigger: GAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAATGAAAGGGCAGACCTaGTCAGTCTTGGGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQMKGQT*SVLGQV
Trigger: GACTTGCCCCAAGACTGAGCAGGTCTGCCCTTTCAT...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTTCCTGCCGGAACACTTaGATAGGCTGCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: WPRGGLNITACLRVLVWISCRNT*IGCPAL
Trigger: GAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGA...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCTCCTGCCGGAACACTTaGATAGGCTGCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPSCRNT*IGCPAL
Trigger: GAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGA...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCCTTCCCCAAAGGGGCTaGCTCCTGAATCCTGCAATC +
Preference number: 4 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSLPQRG*LLNPAI
Trigger: GATTGCAGGATTCAGGAGGCAGCCCCTTTGGGGAAG...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAGCATATAGGTGGGATTaGAGCCTAGTCAAAGGAACT +
Preference number: 4 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQAYRWD*SLVKGT
Trigger: AGTTCCTTTGACTAGGCTGCAATCCCACCTATATGC...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTGAGCACAAAGGAGGGTaGTGGTTTGGCTTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLEHKGG*WFGFPV
Trigger: AACAGGAAAGCCAAACCAGCACCCTCCTTTGTGCTC...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTCAGGGAAACTATGAATaGGCTATGTGGGCTCAGTTG +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGQGNYE*AMWAQL
Trigger: CAACTGAGCCCACATAGCGCATTCATAGTTTCCCTG...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTCCACACAGAGCCCTTTaGATCTTATCTCACGCAACT +
Preference number: 4 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFPHRAL*ILSHAT
Trigger: AGTTGCGTGAGATAAGATGCAAAGGGCTCTGTGTGG...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp AGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTGCTCTGATGCTCTCTCTAGGTaGTGCCAACAGGAATTACCT +
Preference number: 4 (lower is better)
Translates to: RLRKQDCFSSHTVVLDCSDALSR*CQQELP
Trigger: AGGTAATTCCTGTTGGCAGCACCTAGAGAGAGCATC...AGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAATTTGGCCTTTTCATTaGTCATGCAGTCAGTTTATA +
Preference number: 4 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRIWPFH*SCSQFI
Trigger: TATAAACTGACTGCATGAGCAATGAAAAGGCCAAAT...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTCTGTTTCGTGTCCAGTaGAAGCTGGGGGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: WPRGGLNITACLRVLVWILFRVQ*KLGAGF
Trigger: GAACCCTGCCCCCAGCTTCCACTGGACACGAAACAG...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGCCTGCAGCATCACGTTaGAGAAGTATAGGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLPAASR*RSIGLR
Trigger: ACGGAGACCTATACTTCTCCAACGTGATGCTGCAGG...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTCCTGCAGCATCACGTTaGAGAAGTATAGGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLPAASR*RSIGLR
Trigger: ACGGAGACCTATACTTCTCCAACGTGATGCTGCAGG...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTTTCTGCTGGATGGTGTaGGTGAAGTGGAAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: WPRGGLNITACLRVLVWIFCWMV*VKWKRA
Trigger: CGCCCGCTTCCACTTCACCCACACCATCCAGCAGAA...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TCCAGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCGGGATACATGAAGCTTaGTGTTCTTTCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: SSTACSETGSSLTLTSRGGIHEA*CSFCNS
Trigger: GGAGTTGCAGAAAGAACACCAAGCTTCATGTATCCC...GCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGGGATACATGAAGCTTaGTGTTCTTTCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTGIHEA*CSFCNS
Trigger: GGAGTTGCAGAAAGAACACCAAGCTTCATGTATCCC...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGCCATTCACCATCCACTaGACAGTGGGTTTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: TACSETGSSLTLTSRGKKPFTIH*TVGLGF
Trigger: AAACCCCAAACCCACTGTCCAGTGGATGGTGAATGG...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGCCATTCACCATCCACTaGACAGTGGGTTTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQPFTIH*TVGLGF
Trigger: AAACCCCAAACCCACTGTCCAGTGGATGGTGAATGG...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGATCGCAGTGTGGGGATaGGAGACCCAAAGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: LTSEEYSTLKARCVTKQEIAVWG*ETQRKG
Trigger: GCCCTTTCTTTGGGTCTCCCATCCCCACACTGCGAT...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTTGCCAGACCCCAGGTTaGAACTGGTCTTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: QGPLICIHPNERADLLSLCQTPG*NWSSSN
Trigger: GTTTGAAGAAGACCAGTTCCAACCTGGGGTCTGGCA...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TCTCCCATTGACCACAACCATCTCCAGCTTGTAGTTACTGTAGGGGAAGAGGCGTGCCAGACCCCAGGTTaGAACTGGTCTTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: SPIDHNHLQLVVTVGEEACQTPG*NWSSSN
Trigger: GTTTGAAGAAGACCAGTTCCAACCTGGGGTCTGGCA...CGCCTCTTCCCCTACAGTAACTACAAGCTGGAGATGGTTGTGGTCAATGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CCA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTATAGGGCACGTAGACTaGGGTCTGCCCCACCACGTA +
Preference number: 4 (lower is better)
Translates to: WPRGGLNITACLRVLVWIIGHVD*GLPHHV
Trigger: TACGTGGTGGGGCAGACCCCAGTCTACGTGCCCTAT...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CCA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTAATCATGATCCCATTTaGATGCTCAGGATGATCCCA +
Preference number: 4 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLNHDPI*MLRMIP
Trigger: TGGGATCATCCTGAGCATCCAAATGGGATCATGATT...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCAGACCTGCTCAGTCTTaGGGCAAGTCCCCATCCACA +
Preference number: 4 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSRPAQS*GKSPST
Trigger: TGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCT...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGGAGATAGACGTTGCTaGAGGCTTCAAGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQGDRRC*RLQGLQ
Trigger: CTGCAAGCCTTGAAGCCTCCAGCAACGTCTATCTCC...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCCCAGGCCCCCTGGCTaGCAGCCGGAGAGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILPRPPG*QPERLK
Trigger: TTTGAGCCTCTCCGGCTGCCAGCCAGGGGGCCTGGG...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCGGAAGGACAGAGCCCTaGTCTGGCCCAGGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILGRTEP*SGPGPL
Trigger: CAGGGGGCCTGGGCCAGACCAGGGCTCTGTCCTTCC...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATACCTGCCTTCCTTGCTTaGGGAAAACTTAATTCTTCA +
Preference number: 4 (lower is better)
Translates to: HFWSCRNTCIGCPALLEIPAFLA*GKLNSS
Trigger: TGAAGAATTAAGTTTTCCCCAAGCAAGGAAGGCAGG...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTCCTGCTGAGCTGGAGTaGACTCTGACATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: WPRGGLNITACLRVLVWIPAELE*TLTWAP
Trigger: TGGAGCCCATGTCAGAGTCCACTCCAGCTCAGCAGG...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CCCACAGAACAGCAGCCTGAGAGAGGGCTAACAGCATTTTCTTCATACACAAAGGTACTTCCCGAACCCTaGCCTCGACAATCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PTEQQPERGLTAFSSYTKVLPEP*PRQSFR
Trigger: CCTGAAGGATTGTCGAGGCCAGGGTTCGGGAAGTAC...CTTTGTGTATGAAGAAAATGCTGTTAGCCCTCTCTCAGGCTGCTGTTCTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGGCAGGGGCAATGGGGTaGACCAGATGTCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: PQCPTELAEKMISARDGRAGAMG*TRCLQP
Trigger: AGGTTGGAGACATCTGGTCCACCCCATTGCCCCTGC...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp AGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTGCTCTATGCAACCGCAACCATaGGCTTTTGTGTGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: RLRKQDCFSSHTVVLDCSMQPQP*AFVCLA
Trigger: AGCCAAACACACAAAAGCCCATGGTTGCGGTTGCAT...AGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGGTCAAGGGAGGGCACTaGTCTGACTCTGCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: FKQPYWLSSGLWFLTSREVKGGH*SDSARL
Trigger: AAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGAC...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
3UTR CAA 72 bp TCTCCAAGACAATGTTGGAATCTGGATCGCTATCCCTaGGAAGCACTGCTTGGCAACAGGGTTGTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SPRQCWNLDRYP*EALLGNRVVVC
Trigger: GCAGACCACAACCCTGTTGCCAAGCAGTGCTTCCAAGGGATAGCGATCCAGATTCCAACATTGTCTTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
CDS-3UTR TCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTTCGCTGACTGCTTGGTaGTGGTTGGCGGCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: RLITDRLILVSETILFVFSLTAW*WLAAAS
Trigger: TGACGCAGCCGCCAACCATCACCAAGCAGTCAGCGA...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGTCTCCGTTATGGCCCTaGGAGACACGTTTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LTSEEYSTLKARCVTKQESPLWP*ETRLSW
Trigger: CCAAGACAAACGTGTCTCTCAGGGCCATAACGGAGA...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp AGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTGCTCTTTTGGATGCTCAGGATaGTCCCATTCCAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: RLRKQDCFSSHTVVLDCSFGCSG*SHSRLI
Trigger: AATCAACCTGGAATGGGATCATCCTGAGCATCCAAA...AGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTTTTGGATGCTCAGGATaGTCCCATTCCAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGFGCSG*SHSRLI
Trigger: AATCAACCTGGAATGGGATCATCCTGAGCATCCAAA...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGATCGTACCCTTGTTACTaGAGGTGGTGGTGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRSYPCY*RWWWLR
Trigger: ACGAAGCCACCACCACCTTCAGTAACAAGGGTACGA...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGCCTGGGTTTCACCAGTaGGGAGGCATGAAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: LTSEEYSTLKARCVTKQEPGFHQ*GGMKSK
Trigger: TTTGGACTTCATGCCTCCTCACTGGTGAAACCCAGG...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCGCATACAAAGAGCATTaGGTCCTCCCTAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPAYKEH*VLPRWG
Trigger: CCCCCACCTAGGGAGGACTCAATGCTCTTTGTATGC...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTGAGGCAGCTGTCCCCTaGCCGATGGCAGTGTACTTC +
Preference number: 4 (lower is better)
Translates to: RLITDRLILVSETILFVFEAAVP*PMAVYF
Trigger: GAAGTACACTGCCATCGGTCAGGGGACAGCTGCCTC...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGTATTGGACAGGGCCGTaGCAAATTTGTTGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLYWTGP*QICCGR
Trigger: TCGCCCGCAACAAATTTGGCACGGCCCTGTCCAATA...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGTCCAGGTTGCTTCCTTaGCCATTCTTAAACCATCGC +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWSRLLP*PFLNHR
Trigger: GCGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGA...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCCAGCTGCACCGTGGTaGCCCTTCTGGCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILPAAPW*PFWPPG
Trigger: ACCAGGTGGCCAGAAGGGGCACCACGGTGCAGCTGG...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGGTCTCCAGGTTGGGCTaGCGGACTCGGAAACGCCTA +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGVSRLG*RTRKRL
Trigger: TAGGCGTTTCCGAGTCCGGCAGCCCAACCTGGAGAC...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR GCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGTCGTCACTCTCCTGCTaGTTGATGGTGCCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PQCPTELAEKMISARDGRSSLSC*LMVPSR
Trigger: TCTGGACGGCACCATCAAGCAGCAGGAGAGTGACGA...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGTGCGCACCTTCTCCCTaGCAAAAATACTGTCATTTT +
Preference number: 4 (lower is better)
Translates to: LADPHIVPLLLKVVVASWCAPSP*QKYCHF
Trigger: AAAATGACAGTATTTTTGGCAGGGAGAAGGTGCGCA...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGTGCGCACCTTCTCCCTaGCAAAAATACTGTCATTTT +
Preference number: 4 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMCAPSP*QKYCHF
Trigger: AAAATGACAGTATTTTTGGCAGGGAGAAGGTGCGCA...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGGGGAGCAGTGCCTTATaGCCCAAACACACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LTSEEYSTLKARCVTKQEGSSAL*PKHTSK
Trigger: TTTGCTGGTGTGTTTGGGGCATAAGGCACTGCTCCC...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGAGGGAGCAGTGCCTTATaGCCCAAACACACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRGSSAL*PKHTSK
Trigger: TTTGCTGGTGTGTTTGGGGCATAAGGCACTGCTCCC...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTGGCCACTTCTGGTCCTaGCGGAACACTTGCATAGGC +
Preference number: 4 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLGHFWS*RNTCIG
Trigger: GCCTATGCAAGTGTTCCGGCAGGACCAGAAGTGGCC...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGACATGTGGCAAATGTTaGTTTAATAAAGTCACGGAA +
Preference number: 4 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVTCGKC*FNKVTE
Trigger: TTCCGTGACTTTATTAAAGCAACATTTGCCACATGT...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCTTTACCCTGTCCCCTTaGACTGTGATAAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSFTLSP*TVISCP
Trigger: GGGGCAGCTTATCACAGTGCAAGGGGACAGGGTAAA...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CCCACAGAACAGCAGCCTGAGAGAGGGCTAACAGCATTTTCTTCATACACAAAGATCCCTTGGAAGCACTaGTTGGCAACAGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: PTEQQPERGLTAFSSYTKIPWKH*LATGLW
Trigger: CCACAACCCTGTTGCCAAGCAGTGCTTCCAAGGGAT...CTTTGTGTATGAAGAAAATGCTGTTAGCCCTCTCTCAGGCTGCTGTTCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGTCACTTCTGTGGATTTaGATATCCTTGTCTGTACGA +
Preference number: 4 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVSLLWI*ISLSVR
Trigger: TCGTACAGACAAGGATATGCAAATCCACAGAAGTGA...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGTCACTTCTGTGGATTTaGATATCCTTGTCTGTACGA +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSESLLWI*ISLSVR
Trigger: TCGTACAGACAAGGATATGCAAATCCACAGAAGTGA...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCGCCCTGCTGCCTCTCTaGACCCTGTGGCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILALLPL*TLWPWA
Trigger: TGCCCATGGCCACAGGGTGCAGAGAGGCAGCAGGGC...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAAAACACAGCAGCCCTaGCCTGGGTGGAATCAAAAT +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWKTQQP*PGWNQN
Trigger: ATTTTGATTCCACCCAGGGCAGGGCTGCTGTGTTTT...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000404076.5
CDS-3UTR CCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGGGGATACATGAAGCTTaGTGTTCTTTCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKGIHEA*CSFCNS
Trigger: GGAGTTGCAGAAAGAACACCAAGCTTCATGTATCCC...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CCA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGGGCCACCTCACGGTTTaGGTTAGGTGGTGCCGATTG +
Preference number: 4 (lower is better)
Translates to: FKQPYWLSSGLWFLTSREGHLTV*VRWCRL
Trigger: CAATCGGCACCACCTAACCCAAACCGTGAGGTGGCC...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGGGTAGCCATGCTCGTTaGAGGTGTTGCACTGGTACA +
Preference number: 4 (lower is better)
Translates to: LTSEEYSTLKARCVTKQEGSHAR*RCCTGT
Trigger: TGTACCAGTGCAACACCTCCAACGAGCATGGCTACC...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCTCGGTAGCGCTCGGATaGGAGGCTGGGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILSVALG*EAGVAA
Trigger: AGCAGCCACCCCAGCCTCCCATCCGAGCGCTACCGA...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCGTGGTAGGTCTGCAGTaGTTTTGTCTCCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSVVGLQ*FCLPFS
Trigger: GGAGAAGGGGAGACAAAACCACTGCAGACCTACCAC...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTTGGCTTGGTGGCTACTaGTCCTCACAGCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: WPRGGLNITACLRVLVWIWLGGY*SSQLGR
Trigger: TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTTTGTGGGTGGCTTGGTaGCTACTGGTCCTCACAGCT +
Preference number: 4 (lower is better)
Translates to: WPRGGLNITACLRVLVWILWVAW*LLVLTA
Trigger: AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAA...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATTGTGGGTGGCTTGGTaGCTACTGGTCCTCACAGCT +
Preference number: 4 (lower is better)
Translates to: MHWPRGGLNITACLRVLVLWVAW*LLVLTA
Trigger: AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAA...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAACAAGGGCGGACAGTGTaGTGGAACGCTCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKQGRTV*WNARGG
Trigger: GCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTG...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGCTACGTGTTCTGGTATaGATTCAATCCTTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: LWTGWVWPSIYILGFTSELRVLV*IQSFLP
Trigger: AGGCAAAAAGGATTGAATCCATACCAGAACACGTAG...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGAGAAAGGCATCCTTTaGAAATGCATTGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLEKGIL*KCIGPE
Trigger: CTCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTC...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCACTGATTTTCTTCTGCTaGAGGTACACAGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPLIFFC*RYTVTG
Trigger: GCCAGTGACTGTGTACCTCCAGCAGAAGAAAATCAG...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCCATCTCCTCGAGGGTaGCAGCATGGGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILPSPRG*QHGPWP
Trigger: TGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGG...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATTGAGTGGCCACTTCTaGTCCTGCCGGAACACTTGC +
Preference number: 4 (lower is better)
Translates to: MHWPRGGLNITACLRVLVLSGHF*SCRNTC
Trigger: GCAAGTGTTCCGGCAGGACCAGAAGTGGCCACTCAA...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CCCACAGAACAGCAGCCTGAGAGAGGGCTAACAGCATTTTCTTCATACACAAAGTCTCAAGCCACACCGTaGTTCTTGACTGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PTEQQPERGLTAFSSYTKSQATP*FLTALS
Trigger: GGACAGAGCAGTCAAGAACCACGGTGTGGCTTGAGA...CTTTGTGTATGAAGAAAATGCTGTTAGCCCTCTCTCAGGCTGCTGTTCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGCAGGGCAAGCAATGTTaGCACTGGCTGATTTTCAGA +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWQGKQC*HWLIFR
Trigger: TCTGAAAATCAGCCAGTGCCAACATTGCTTGCCCTG...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTTCTCCAAGACAATGTTaGAATCTGGATCGCTATCCC +
Preference number: 4 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFSPRQC*NLDRYP
Trigger: GGGATAGCGATCCAGATTCCAACATTGTCTTGGAGA...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGAAGGAATGCTAGGAGATaGTCAAGGGAGGGCACTGGT +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRRNARR*SREGTG
Trigger: ACCAGTGCCCTCCCTTGACCATCTCCTAGCATTCCT...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTCAGCAAATCCCAGGGTaGCAGCTTGCATGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RLITDRLILVSETILFVFQQIPG*QLAWAL
Trigger: CAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTG...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGCTGTACATGTCAGGGTaGTTTCTTAAGGACGAGTCA +
Preference number: 4 (lower is better)
Translates to: STACSETGSSLTLTSRGKLYMSG*FLKDES
Trigger: TGACTCGTCCTTAAGAAACCACCCTGACATGTACAG...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680427.1
CDS-3UTR CCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCACAATCAACCATGGTCTaGTTCATCCAGCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPQSTMV*FIQRLL
Trigger: GAGAAGACGCTGGATGAACCAGACCATGGTTGATTG...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404076.5
CDS-3UTR CCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCATGTCCGCTTGGTTGTTaGTGTAAGCGGATTCGTGTA +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPCPLGC*CKRIRV
Trigger: TACACGAATCCGCTTACACCAACAACCAAGCGGACA...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447819.1
3UTR CAA 72 bp GAAACTATGAATGCGCTATGTGGGCTCAGTTGCACCTaGCAGGGCAAGCAATGTTGGCACTGGCTGATTTTC +
Preference number: 4 (lower is better)
Translates to: ETMNALCGLSCT*QGKQCWHWLIF
Trigger: GAAAATCAGCCAGTGCCAACATTGCTTGCCCTGCAAGGTGCAACTGAGCCCACATAGCGCATTCATAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
CDS-3UTR TCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCGATGTGATCCTTCGCTaGCTGCTTGGTGATGGTTGG +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPDVILR*LLGDGW
Trigger: CCAACCATCACCAAGCAGTCAGCGAAGGATCACATC...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR TCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGCACGGAACTGGTAGTTaGCATACGGGGACAGCCGGA +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGHGTGS*HTGTAG
Trigger: TCCGGCTGTCCCCGTATGTCAACTACCAGTTCCGTG...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGATCATGGGCGTCCACGTaGTCTCCATGTTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRSWAST*SPCCSF
Trigger: GAAAGAACAACATGGAGATCACGTGGACGCCCATGA...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGTCTTTACATCTGTTaGACTCCAGCCCAGCAAATC +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWSLYIC*TPAQQI
Trigger: GATTTGCTGGGCTGGAGTTCAACAGATGTAAAGACT...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGATGGATTGTTTTAATTGACTTAGTGGTGGAGTTAGCTGTAAGAAAGGTAAAACCGGCCGCCCGCCACTaGGGAAGTCAATCACCAGGG +
Preference number: 4 (lower is better)
Translates to: GWIVLIDLVVELAVRKVKPAARH*GSQSPG
Trigger: CCCTGGTGATTGACTTCCGCAGTGGCGGGCGGCCGG...TTTTACCTTTCTTACAGCTAACTCCACCACTAAGTCAATTAAAACAATCCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403080.5
CDS-3UTR GCA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGGGAGATTTAGACACCTaGAGGCGGATCCTATTGGAC +
Preference number: 4 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLGDLDT*RRILLD
Trigger: GTCCAATAGGATCCGCCTGCAGGTGTCTAAATCTCC...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGTCGGTCTGCATGTCCTaGAGCATCACGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PQCPTELAEKMISARDGRSVCMS*SITLEK
Trigger: CTTCTCCAACGTGATGCTGCAGGACATGCAGACCGA...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGGCTCGTTGGAGGTGTTaGACTGGTACACAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGARWRC*TGTQPC
Trigger: GCAGGGCTGTGTACCAGTGCAACACCTCCAACGAGC...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGCATAAACATGGTAGTTaGCACCATCCAGGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQHKHGS*HHPGCF
Trigger: GAAGCAACCTGGATGGTGGCAACTACCATGTTTATG...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTCGTCACTCTCCTGCTaGTTGATGGTGCCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLSSLSC*LMVPSR
Trigger: TCTGGACGGCACCATCAAGCAGCAGGAGAGTGACGA...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGTGCGCACCTTCTCCCTaGCAAAAATACTGTCATTTT +
Preference number: 4 (lower is better)
Translates to: TKSIESSLGGGITTLSTVCAPSP*QKYCHF
Trigger: AAAATGACAGTATTTTTGGCAGGGAGAAGGTGCGCA...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCGGGACAGATCAGCGCTaGATAAGGCATACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSGTDQR*IRHTKS
Trigger: GCTCTTTGTATGCCTTATGCAGCGCTGATCTGTCCC...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR GCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCTTGCATAGGCTGCCCTaGTCTCCTGGAGATAGACGT +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPLHRLP*SPGDRR
Trigger: ACGTCTATCTCCAGGAGAGCAGGGCAGCCTATGCAA...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTACCGTGGTTCTTGACTaGTCTGTCCCGCCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: RLITDRLILVSETILFVFTVVLD*SVPPSL
Trigger: AAGGCTGGGCGGGACAGAGCAGTCAAGAACCACGGT...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGGCTCTCTCTAGGTGCTaGCAACAGGAATTACCTAAA +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWALSRC*QQELPK
Trigger: TTTAGGTAATTCCTGTTGGCAGCACCTAGAGAGAGC...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTATTTGGCCTTTTCATTaGTCATGCAGTCAGTTTATA +
Preference number: 4 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPIWPFH*SCSQFI
Trigger: TATAAACTGACTGCATGAGCAATGAAAAGGCCAAAT...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTAATGGTGTGGGTGAAGTaGAAGCGGGCGTTACAACTG +
Preference number: 4 (lower is better)
Translates to: MHWPRGGLNITACLRVLVMVWVK*KRALQL
Trigger: CAGTTGTAACGCCCGCTTCCACTTCACCCACACCAT...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTACTTTGCCCAGGATGTTaGTGGCGACACAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: MHWPRGGLNITACLRVLVLCPGC*WRHRCR
Trigger: TCTACACCTGTGTCGCCACCAACATCCTGGGCAAAG...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGACCCCAGGTTGGAACTaGTCTTCTTCAAACTGGACG +
Preference number: 4 (lower is better)
Translates to: LTSEEYSTLKARCVTKQETPGWN*SSSNWT
Trigger: CGTCCAGTTTGAAGAAGACCAGTTCCAACCTGGGGT...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTCCGGGGTACTTGGAATaGTCATGCCAGACCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RLITDRLILVSETILFVFPGYLE*SCQTPG
Trigger: ACCTGGGGTCTGGCATGACCATTCCAAGTACCCCGG...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGAATCATGATCCCATTTaGATGCTCAGGATGATCCCA +
Preference number: 4 (lower is better)
Translates to: TKSIESSLGGGITTLSTVNHDPI*MLRMIP
Trigger: TGGGATCATCCTGAGCATCCAAATGGGATCATGATT...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCGAGGGGGCTTGTGGGTaGCTTGGTGGCTACTGGTCC +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILEGACG*LGGYWS
Trigger: GGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTC...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGACAGAGACATTGGGTCTaGAGGGGAAGATGCACAAAG +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRQRHWV*RGRCTK
Trigger: CTTTGTGCATCTTCCCCTCCAGACCCAATGTCTCTG...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGCTACGTGTTCTGGTATaGATTCAATCCTTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: SLADPHIVPLLLKVVVASLRVLV*IQSFLP
Trigger: AGGCAAAAAGGATTGAATCCATACCAGAACACGTAG...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAACCTGTCTACGTGTTCTaGTATGGATTCAATCCTTTT +
Preference number: 4 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQPVYVF*YGFNPF
Trigger: AAAAGGATTGAATCCATACCAGAACACGTAGACAGG...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGACCTCTATCTACATCCTaGGTTTCACCAGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRPLSTS*VSPVRR
Trigger: CCTCCTCACTGGTGAAACCCAGGATGTAGATAGAGG...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCAGGTGCCCTCTACTCTaGACAGGGTGGGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILRCPLL*TGWVWP
Trigger: GGGCCACACCCACCCTGTCCAGAGTAGAGGGCACCT...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGTTATCTCACGCAACTTaGATGTGGACTAACCCTCTC +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWLSHAT*MWTNPL
Trigger: GAGAGGGTTAGTCCACATCCAAGTTGCGTGAGATAA...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTATCCCTTCACTTCTGTaGATTTGCATATCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTIPSLL*ICISLS
Trigger: AGACAAGGATATGCAAATCCACAGAAGTGAAGGGAT...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGAACAAATTGGAATGGTaGGGGATATGGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLNKLEW*GIWVCG
Trigger: ACCACACACCCATATCCCCCACCATTCCAATTTGTT...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGATGTCCGCTTGGTTGTTaGTGTAAGCTTCATTCGGGG +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRCPLGC*CKLHSG
Trigger: CCCCGAATGAAGCTTACACCAACAACCAAGCGGACA...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425360.5
3UTR CAA 72 bp GCCTCAGCGTTTGATCTCTCTGACCACCTGCCTTCCTaGCTTGGGGAAAACTTAATTCTTCAGCCTCAGATT +
Preference number: 4 (lower is better)
Translates to: ASAFDLSDHLPS*LGENLILQPQI
Trigger: AATCTGAGGCTGAAGAATTAAGTTTTCCCCAAGCAAGGAAGGCAGGTGGTCAGAGAGATCAAACGCTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000539706.5
3UTR CAA 72 bp TCTCCACTTTCTCTATATCACTCAGGCCCCTTTCAGTaGAGACGTGGGGAAGTTAATGACTCCACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: SPLSLYHSGPFQ*RRGEVNDSTQE
Trigger: CTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCCTGAGTGATATAGAGAAAGTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR TCA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGCTGGATGGTGTGGGTaGAGTGGAAGCGGGCGTTAC +
Preference number: 4 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKAGWCG*SGSGRY
Trigger: GTAACGCCCGCTTCCACTTCACCCACACCATCCAGC...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAATTCGGGGGTGCTGGTaGCTCCTCTGTGACGGCTTC +
Preference number: 4 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKIRGCW*LLCDGF
Trigger: GAAGCCGTCACAGAGGAGTCACCAGCACCCCCGAAT...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTACACAGTCACTGGCGTTaGAGTCCTTTCTATCAGTGC +
Preference number: 4 (lower is better)
Translates to: MHWPRGGLNITACLRVLVHSHWR*SPFYQC
Trigger: GCACTGATAGAAAGGACTTCAACGCCAGTGACTGTG...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCCCAAGACCAGACACCTaGTTTTCTTCTGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPPRPDT*FSSAGG
Trigger: ACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGG...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGCCAAGACCAGACACCTaGTTTTCTTCTGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PQCPTELAEKMISARDGRPRPDT*FSSAGG
Trigger: ACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGG...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGATGTATACACCCCAATaGAAGGGCAGACCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PQCPTELAEKMISARDGRMYTPQ*KGRPAQ
Trigger: CTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACAT...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGGGCATCACAACACTaGGTACGGTGCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKGASQH*VRCHLR
Trigger: CCTGAGGTGGCACCGTACTCAGTGTTGTGATGCCCC...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGATTAGGTGGGGAGGATaGAGGCAGCACCTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGIRWGG*RQHLRS
Trigger: AGACCGAAGGTGCTGCCTTCATCCTCCCCACCTAAT...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CAGGTTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAATTGCATGACTGGGTaGACCACACACAGGCTGATC +
Preference number: 4 (lower is better)
Translates to: QVQTTLLAQFWAMVSYQQNCMTG*TTHRLI
Trigger: GATCAGCCTGTGTGTGGTTCACCCAGTCATGCAATT...CTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGCTGCCCTTAATTGCATaGCTGGGTGAACCACACACA +
Preference number: 4 (lower is better)
Translates to: PQCPTELAEKMISARDGRLPLIA*LGEPHT
Trigger: TGTGTGTGGTTCACCCAGTCATGCAATTAAGGGCAG...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGAAGGAATACAGCACACTaGAGGCCCGATGTGTTACAA +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRRNTAH*RPDVLQ
Trigger: TTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCT...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGGCAGAGGGACAACACTaGCTGAGGACATTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: FKQPYWLSSGLWFLTSREAEGQH*LRTLQL
Trigger: CAACTGCAATGTCCTCAGTCAGTGTTGTCCCTCTGC...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGGGAAAGAACATGATGTaGGAGGGGTTAAAACAAGGT +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWGKNMM*EGLKQG
Trigger: ACCTTGTTTTAACCCCTCTCACATCATGTTCTTTCC...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCGTAAGAAAGGTAAAATaGTCACAACGAGAAACCCCT +
Preference number: 4 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTVRKVK*SQRETP
Trigger: AGGGGTTTCTCGTTGTGATCATTTTACCTTTCTTAC...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR GCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCAGCACTCAGCTTCTCTaGCTCATTCAGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPSTQLL*LIQPLP
Trigger: AGGAAGAGGCTGAATGAGGCAGAGAAGCTGAGTGCT...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTCTTGGTTTTCAGCTTTaGCCAGGATGTTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: WPRGGLNITACLRVLVWILGFQL*PGCWWR
Trigger: TCGCCACCAACATCCTGGGCAAAGCTGAAAACCAAG...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCTTCAGGGAGGGGTCGTaGTTCACCCGACACTCCAGC +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILFREGS*FTRHSS
Trigger: GCTGGAGTGTCGGGTGAAGCACGACCCCTCCCTGAA...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTCAATGTGGGAGGAGCTaGGGTTGGAGTAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: WPRGGLNITACLRVLVWIQCGRS*GWSSFI
Trigger: AATGAAGCTACTCCAACCGCAGCTCCTCCCACATTG...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCGGCATCCTTTGGAAATaGATTGGCCCAGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPGILWK*IGPEVV
Trigger: AACCACCTCTGGGCCAATGCATTTCCAAAGGATGCC...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTAAACACTTGCATAGGCTaGCCTGCTCTCCTGGAGATA +
Preference number: 4 (lower is better)
Translates to: MHWPRGGLNITACLRVLVNTCIG*PALLEI
Trigger: TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTT...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGACATGTGGCAAATGTTaGTTTAATAAAGTCACGGAA +
Preference number: 4 (lower is better)
Translates to: WTGWVWPSIYILGFTSEETCGKC*FNKVTE
Trigger: TTCCGTGACTTTATTAAAGCAACATTTGCCACATGT...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGGCAGGCGGATCCTATTaGACAGGGCCGTGCCAAATT +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGAGGSY*TGPCQI
Trigger: AATTTGGCACGGCCCTGTCCAATAGGATCCGCCTGC...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGGAGACACGTTTGTCTTaGGTGATGGGCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: FKQPYWLSSGLWFLTSREETRLS*VMGSME
Trigger: CTCCATGGAGCCCATCACCCAAGACAAACGTGTCTC...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GGATGGATTGTTTTAATTGACTTAGTGGTGGAGTTAGCTGTAAGAAAGGTAAAACCACGAAGCACCATCTaGCTGCTCGCGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GWIVLIDLVVELAVRKVKPRSTI*LLAVPW
Trigger: CCAGGGCACCGCGAGCAGCCAGATGGTGCTTCGTGG...TTTTACCTTTCTTACAGCTAACTCCACCACTAAGTCAATTAAAACAATCCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403080.5
CDS-3UTR CCA 90 bp CAGGTTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGACGGTTTGGGTTAGGTaGTGCCGATTGCAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: QVQTTLLAQFWAMVSYQQTVWVR*CRLQRF
Trigger: GAACCTTTGCAATCGGCACCACCTAACCCAAACCGT...CTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCACCCCAGGTTGGAACTaGTCTTCTTCAAACTGGACG +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPTPGWN*SSSNWT
Trigger: CGTCCAGTTTGAAGAAGACCAGTTCCAACCTGGGGT...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCCCATGTTGTTCTTTCTaGTCCCCTCTCCCTTCACGT +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPPCCSF*SPLPSR
Trigger: ACGTGAAGGGAGAGGGGACCAGAAAGAACAACATGG...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCTTGGGAGGGGGCTTGTaGGTGGCTTGGTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILLGGGL*VAWWLL
Trigger: CAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAA...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCCAGAGACATTGGGTCTaGAGGGGAAGATGCACAAAG +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPQRHWV*RGRCTK
Trigger: CTTTGTGCATCTTCCCCTCCAGACCCAATGTCTCTG...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGAGGCTAGGTACCTTTaGTTTCAAAAATGCATTAGG +
Preference number: 4 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGEARYL*FQKCIR
Trigger: CCTAATGCATTTTTGAAACCAAAGGTACCTAGCCTC...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGCAGCTGATCCATTCCTaGGGATCAGCTTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGQLIHS*GSASPS
Trigger: GGAGGGTGAAGCTGATCCCCAGGAATGGATCAGCTG...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCAGACTGGAGCGCCGATaGCATGGTGCTGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILRLERR*HGAVLA
Trigger: AGCCAGGACAGCACCATGCCATCGGCGCTCCAGTCT...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCAACAGGGCCCAACCCTaGTGGCCTTTCCCACTCCTC +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILNRAQP*WPFPLL
Trigger: GAGGAGTGGGAAAGGCCACCAGGGTTGGGCCCTGTT...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGTGCCTCCCAGGGCCTTaGTCTCCTCTTGACATATCA +
Preference number: 4 (lower is better)
Translates to: FKQPYWLSSGLWFLTSRECLPGP*SPLDIS
Trigger: TGATATGTCAAGAGGAGACCAAGGCCCTGGGAGGCA...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCGAGCAGGACAGAAGGTaGCCACGTCACAGGCGACTG +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILEQDRR*PRHRRL
Trigger: CAGTCGCCTGTGACGTGGCCACCTTCTGTCCTGCTC...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGTTGCGGGCGAAGCACTaGTATTCCCCCTCATATTCC +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGLRAKH*YSPSYS
Trigger: GGAATATGAGGGGGAATATCAGTGCTTCGCCCGCAA...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGATTTGGATGCTCAGGATaGTCCCATTCCAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRFGCSG*SHSRLI
Trigger: AATCAACCTGGAATGGGATCATCCTGAGCATCCAAA...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAATTGGCTGAGAAGATaGTATCTGCTAGAGATGGAA +
Preference number: 4 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPNWLRR*YLLEME
Trigger: TTCCATCTCTAGCAGATATCATCTTCTCAGCCAATT...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGCACCTCAGGGTCCCCTaGTATGTATACACCCCAATG +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGHLRVP*YVYTPM
Trigger: CATTGGGGTGTATACATATCAGGGGACCCTGAGGTG...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCGGCTCTGTTCCAGGCTaGGGAGGGAAGGTAAACTCC +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILGSVPG*GGKVNS
Trigger: GGAGTTTACCTTCCCTCCGCAGCCTGGAACAGAGCC...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTAACCTTTCTTGTACCATaGGATGTCTGGTGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: MHWPRGGLNITACLRVLVTFLVP*DVWCWD
Trigger: GTCCCAACACCAGACATCGCATGGTACAAGAAAGGT...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAATCGTGTGCCGGATGCTaGCCATCTTGTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKSCAGC*PSCWRP
Trigger: TGGCCTCCAACAAGATGGGCAGCATCCGGCACACGA...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp CCCACAGAACAGCAGCCTGAGAGAGGGCTAACAGCATTTTCTTCATACACAAAGCATAAACATGGTAGTTaGCACCATCCAGGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PTEQQPERGLTAFSSYTKHKHGS*HHPGCF
Trigger: GAAGCAACCTGGATGGTGGCAACTACCATGTTTATG...CTTTGTGTATGAAGAAAATGCTGTTAGCCCTCTCTCAGGCTGCTGTTCTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTACTTGGAATGGTCATaGCAGACCCCAGGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLYLEWS*QTPGWN
Trigger: GTTCCAACCTGGGGTCTGGCATGACCATTCCAAGTA...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGCAATGTGGGAGGAGCTaGGGTTGGAGTAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: FKQPYWLSSGLWFLTSREQCGRS*GWSSFI
Trigger: AATGAAGCTACTCCAACCGCAGCTCCTCCCACATTG...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGTCAAATCGGAGGCTGTaGCCATGGCAGCTGATCCAT +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGSNRRL*PWQLIH
Trigger: ATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGA...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGGATGCTCTCTCTAGGTaGTGCCAACAGGAATTACCT +
Preference number: 4 (lower is better)
Translates to: PQCPTELAEKMISARDGRDALSR*CQQELP
Trigger: AGGTAATTCCTGTTGGCAGCACCTAGAGAGAGCATC...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CAGGTTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGACAGACAAAAATGTaGTATGTCCCTGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: QVQTTLLAQFWAMVSYQQRQTKM*YVPAPS
Trigger: GGAGGGAGCAGGGACATAGCACATTTTTGTCTGTCT...CTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCAGCCATCCTCTTCCTTaGGGTCTTCAGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILSHPLP*GLQGQG
Trigger: CCCTTGGCCCTGAAGACCCCAAGGAAGAGGATGGCT...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTGTGGTAGGTCTGCAGTaGTTTTGTCTCCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RLITDRLILVSETILFVFVVGLQ*FCLPFS
Trigger: GGAGAAGGGGAGACAAAACCACTGCAGACCTACCAC...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGCTACGTGTTCTGGTATaGATTCAATCCTTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWLRVLV*IQSFLP
Trigger: AGGCAAAAAGGATTGAATCCATACCAGAACACGTAG...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCGCATTGGCCCAGAGGTaGTTTGAATATTACAGCCTG +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPALAQR*FEYYSL
Trigger: CAGGCTGTAATATTCAAACCACCTCTGGGCCAATGC...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTACTGATTTTCTTCTGCTaGAGGTACACAGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: MHWPRGGLNITACLRVLVLIFFC*RYTVTG
Trigger: GCCAGTGACTGTGTACCTCCAGCAGAAGAAAATCAG...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGGGAGATAGACGTTGCTaGAGGCTTCAAGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGGDRRC*RLQGLQ
Trigger: CTGCAAGCCTTGAAGCCTCCAGCAACGTCTATCTCC...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
47% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTACTCAGTTCTGGGCTATaGTTTCTTACCAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: MHWPRGGLNITACLRVLVLSSGL*FLTSRE
Trigger: CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAG...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTGGCATGGTGCTGTCCTaGCTTCACTGTTGGTATGTC +
Preference number: 4 (lower is better)
Translates to: RLITDRLILVSETILFVFGMVLS*LHCWYV
Trigger: GACATACCAACAGTGAAGCCAGGACAGCACCATGCC...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGCCATTCTCCTCATTATaGAACACCCATTTAATACTA +
Preference number: 4 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMPFSSL*NTHLIL
Trigger: TAGTATTAAATGGGTGTTCCATAATGAGGAGAATGG...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
3UTR CAA 72 bp AGGCATCCTTTGGAAATGCATTGGCCCAGAGGTGGTTaGAATATTACAGCCTGTCTACGTGTTCTGGTATGG +
Preference number: 4 (lower is better)
Translates to: RHPLEMHWPRGG*NITACLRVLVW
Trigger: CCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCATTTCCAAAGGATGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
CDS-3UTR TCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGATCACTATAGTCAAATaGGCCATCCTCTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PQCPTELAEKMISARDGRITIVK*AILFLG
Trigger: CCCAAGGAAGAGGATGGCTCATTTGACTATAGTGAT...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAACAGGCACACTTCCCTaGCATTCCCTTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKTGTLP*HSLQGQ
Trigger: CTGTCCCTGAAGGGAATGTCAGGGAAGTGTGCCTGT...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR TCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTAGGGACAACACTGACTaGGGACATTGCAGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: RLITDRLILVSETILFVFRDNTD*GHCSWE
Trigger: TTCCCAACTGCAATGTCCTCAGTCAGTGTTGTCCCT...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGATGGATTGTTTTAATTaGCTTAGTGGTGGAGTTAGC +
Preference number: 4 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQMDCFN*LSGGVS
Trigger: GCTAACTCCACCACTAAGTCAATTAAAACAATCCAT...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403080.5
CDS-3UTR GCA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTCCAGGTTGCTTCCTTaGCCATTCTTAAACCATCGC +
Preference number: 4 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLSRLLP*PFLNHR
Trigger: GCGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGA...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGCATAAACATGGTAGTTaGCACCATCCAGGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PQCPTELAEKMISARDGRHKHGS*HHPGCF
Trigger: GAAGCAACCTGGATGGTGGCAACTACCATGTTTATG...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCTGCGCACCTTCTCCCTaGCAAAAATACTGTCATTTT +
Preference number: 4 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSCAPSP*QKYCHF
Trigger: AAAATGACAGTATTTTTGGCAGGGAGAAGGTGCGCA...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR GCA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGATGCGCACCTTCTCCCTaGCAAAAATACTGTCATTTT +
Preference number: 4 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRCAPSP*QKYCHF
Trigger: AAAATGACAGTATTTTTGGCAGGGAGAAGGTGCGCA...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGAACACTTGCATAGGCTaGCCTGCTCTCCTGGAGATA +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGNTCIG*PALLEI
Trigger: TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTT...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp GGATGGATTGTTTTAATTGACTTAGTGGTGGAGTTAGCTGTAAGAAAGGTAAAAGTACCATGCGATGTCTaGTGTTGGGACCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: GWIVLIDLVVELAVRKVKVPCDV*CWDPGG
Trigger: GCCTCCGGGGTCCCAACACCAGACATCGCATGGTAC...TTTTACCTTTCTTACAGCTAACTCCACCACTAAGTCAATTAAAACAATCCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403080.5
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCATCGCAGTGTGGGGATaGGAGACCCAAAGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILIAVWG*ETQRKG
Trigger: GCCCTTTCTTTGGGTCTCCCATCCCCACACTGCGAT...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGTCCTCACAGCTTaGCAGACCCCCATATCGTAC +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILLVLTA*QTPISY
Trigger: GTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAG...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGCAGAGACATTGGGTCTaGAGGGGAAGATGCACAAAG +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGQRHWV*RGRCTK
Trigger: CTTTGTGCATCTTCCCCTCCAGACCCAATGTCTCTG...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCTTGAGTGGCCACTTCTaGTCCTGCCGGAACACTTGC +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILLSGHF*SCRNTC
Trigger: GCAAGTGTTCCGGCAGGACCAGAAGTGGCCACTCAA...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAACAGCTGATCCATTCCTaGGGATCAGCTTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKQLIHS*GSASPS
Trigger: GGAGGGTGAAGCTGATCCCCAGGAATGGATCAGCTG...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTCTCAGTTCTGGGCTATaGTTTCTTACCAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLLSSGL*FLTSRE
Trigger: CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAG...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAATCCAAAGCGTTTTCTaGAAAGGCCAGTCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQIQSVF*KGQSFN
Trigger: ATTAAAGGACTGGCCTTTCCAGAAAACGCTTTGGAT...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCGCCTTGGTGACCAGATaGACCAAGCTCTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILALVTR*TKLSLR
Trigger: TCTGAGGGAGAGCTTGGTCCATCTGGTCACCAAGGC...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGCCATTCTCCTCATTATaGAACACCCATTTAATACTA +
Preference number: 4 (lower is better)
Translates to: TKSIESSLGGGITTLSTVPFSSL*NTHLIL
Trigger: TAGTATTAAATGGGTGTTCCATAATGAGGAGAATGG...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
3UTR CAA 72 bp CACCATGTCAAACAAGAGCCTCAGTGTCCTACAGAATaGGCTGAGAAGATGATATCTGCTAGAGATGGAAGG +
Preference number: 4 (lower is better)
Translates to: HHVKQEPQCPTE*AEKMISARDGR
Trigger: CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGGCTCTTGTTTGACATGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000404907.5
ENST00000425360.5
ENST00000430393.6
ENST00000447819.1
ENST00000539706.5
3UTR CAA 72 bp ATAAACATGGTAGTTGCCACCATCCAGGTTGCTTCCTaGCCCATTCTTAAACCTCACAACAGAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: INMVVATIQVAS*PILKPHNRAAE
Trigger: TTCTGCTGCTCTGTTGTGAGGTTTAAGAATGGGCAAGGAAGCAACCTGGATGGTGGCAACTACCATGTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR TCA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAAAAGAATCACTCGAATaGGCTGGTTCCGGGGCGACA +
Preference number: 4 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKKESLE*AGSGAT
Trigger: TGTCGCCCCGGAACCAGCTCATTCGAGTGATTCTTT...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
44% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAATCGTACCCTTGTTACTaGAGGTGGTGGTGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKSYPCY*RWWWLR
Trigger: ACGAAGCCACCACCACCTTCAGTAACAAGGGTACGA...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR TCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGAGGAATACAGCACACTaGAGGCCCGATGTGTTACAA +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGRNTAH*RPDVLQ
Trigger: TTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCT...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCAGCTCAAGGGGAGTGTaGAGAGGTTGGCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILSSRGV*RGWQRA
Trigger: AGCTCTTTGCCAACCTCTTCACACTCCCCTTGAGCT...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp GGATGGATTGTTTTAATTGACTTAGTGGTGGAGTTAGCTGTAAGAAAGGTAAAAGGCTCTGTTCCAGGCTaGGGAGGGAAGGTAAACTCC +
Preference number: 4 (lower is better)
Translates to: GWIVLIDLVVELAVRKVKGSVPG*GGKVNS
Trigger: GGAGTTTACCTTCCCTCCGCAGCCTGGAACAGAGCC...TTTTACCTTTCTTACAGCTAACTCCACCACTAAGTCAATTAAAACAATCCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403080.5
CDS-3UTR GCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGCCGTGCCAAATTTGTTaGGGGCGAAGCACTGATATT +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGPCQIC*GRSTDI
Trigger: AATATCAGTGCTTCGCCCGCAACAAATTTGGCACGG...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCACGTTCCATATGGACTaGTCATCAGGGGCGGATTCG +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILTFHMD*SSGADS
Trigger: CGAATCCGCCCCTGATGAGCAGTCCATATGGAACGT...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGCGCACCTTCTCCCTaGCAAAAATACTGTCATTTT +
Preference number: 4 (lower is better)
Translates to: MHWPRGGLNITACLRVLVCAPSP*QKYCHF
Trigger: AAAATGACAGTATTTTTGGCAGGGAGAAGGTGCGCA...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCATGAAAGGGCAGACCTaGTCAGTCTTGGGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILMKGQT*SVLGQV
Trigger: GACTTGCCCCAAGACTGAGCAGGTCTGCCCTTTCAT...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAATTGCATAGGCTGCCCTaGTCTCCTGGAGATAGACGT +
Preference number: 4 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKLHRLP*SPGDRR
Trigger: ACGTCTATCTCCAGGAGAGCAGGGCAGCCTATGCAA...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTACATGTGGCAAATGTTaGTTTAATAAAGTCACGGAA +
Preference number: 4 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTTCGKC*FNKVTE
Trigger: TTCCGTGACTTTATTAAAGCAACATTTGCCACATGT...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGAACAGGGTTGTGGTCTaGTGTATGTATGTGAGCATG +
Preference number: 4 (lower is better)
Translates to: FKQPYWLSSGLWFLTSRENRVVV*CMYVSM
Trigger: CATGCTCACATACATACAGCAGACCACAACCCTGTT...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTTCTTTTCTCGTACTaGGTACTTGCCGCCGCGACT +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILLLFSY*VLAAAT
Trigger: AGTCGCGGCGGCAAGTACCCAGTACGAGAAAAGAAG...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCTTCCCAGTCACCAGGTaGTGTGGCAGACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILFPVTR*CGRLAH
Trigger: ATGAGCAAGTCTGCCACACCACCTGGTGACTGGGAA...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
3UTR CAA 72 bp ATGACCATTACACACTCTCAGGTTCAAACAACCTTATaGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAG +
Preference number: 4 (lower is better)
Translates to: MTITHSQVQTTL*AQFWAMVSYQQ
Trigger: CTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAACCTGAGAGTGTGTAATGGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000360049.8
ENST00000401399.5
ENST00000447819.1
ENST00000539706.5
CDS-3UTR TCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCGGTCCTTGGCGATGTTaGAGAATCTGCTGTTTCGTG +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILGPWRC*RICCFV
Trigger: CACGAAACAGCAGATTCTTCAACATCGCCAAGGACC...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR TCA 90 bp GGATGGATTGTTTTAATTGACTTAGTGGTGGAGTTAGCTGTAAGAAAGGTAAAATGCTCATCCAGAAGATaGCCGGGGATGGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: GWIVLIDLVVELAVRKVKCSSRR*PGMEVQ
Trigger: CTGGACTTCCATCCCCGGTCATCTTCTGGATGAGCA...TTTTACCTTTCTTACAGCTAACTCCACCACTAAGTCAATTAAAACAATCCATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403080.5
CDS-3UTR TCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGGCCTTGGTCTCCTCTTaGCATATCAAGCTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGALVSS*HIKLFV
Trigger: AACAAAGAGCTTGATATGTCAAGAGGAGACCAAGGC...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAACTTGGTTTTCAGCTTTaGCCAGGATGTTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKLGFQL*PGCWWR
Trigger: TCGCCACCAACATCCTGGGCAAAGCTGAAAACCAAG...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp GGATGGATTGTTTTAATTGACTTAGTGGTGGAGTTAGCTGTAAGAAAGGTAAAACTTGGTCTAGCTCGGTaGTGGCGACACACGTGTAAC +
Preference number: 4 (lower is better)
Translates to: GWIVLIDLVVELAVRKVKLGLAR*WRHTCN
Trigger: GTTACACGTGTGTCGCCAGCACCGAGCTAGACCAAG...TTTTACCTTTCTTACAGCTAACTCCACCACTAAGTCAATTAAAACAATCCATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403080.5
CDS-3UTR GCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGAGTCCTTTCTATCAGTaGCCACTCCTGTTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGSPFYQ*PLLFLK
Trigger: TTTGAGGAACAGGAGTGGGCACTGATAGAAAGGACT...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCAACACTTGCATAGGCTaGCCTGCTCTCCTGGAGATA +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILNTCIG*PALLEI
Trigger: TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTT...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTGGGATACATGAAGCTTaGTGTTCTTTCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: RLITDRLILVSETILFVFGIHEA*CSFCNS
Trigger: GGAGTTGCAGAAAGAACACCAAGCTTCATGTATCCC...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTTGGCCTTATCAGATaGGAGGTCCCCACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILLGLIR*EVPTFL
Trigger: AAGAAAGGTGGGGACCTCCCATCTGATAAGGCCAAG...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAACGGTTTGGGTTAGGTaGTGCCGATTGCAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKTVWVR*CRLQRF
Trigger: GAACCTTTGCAATCGGCACCACCTAACCCAAACCGT...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CCA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCGAGGCTAGGTACCTTTaGTTTCAAAAATGCATTAGG +
Preference number: 4 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPEARYL*FQKCIR
Trigger: CCTAATGCATTTTTGAAACCAAAGGTACCTAGCCTC...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCACAAAGGAGGGTGCTaGTTTGGCTTTCCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILHKGGC*FGFPVS
Trigger: GCTAACAGGAAAGCCAAACCAGCACCCTCCTTTGTG...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGAATTGGCTGAGAAGATaGTATCTGCTAGAGATGGAA +
Preference number: 4 (lower is better)
Translates to: FKQPYWLSSGLWFLTSRENWLRR*YLLEME
Trigger: TTCCATCTCTAGCAGATATCATCTTCTCAGCCAATT...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR TCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCAGCTCAGGGGCATCTaGTCTGCCTCATTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILQLRGI*SASFLK
Trigger: TTTCAAAAATGAGGCAGATCAGATGCCCCTGAGCTG...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp GGATGGATTGTTTTAATTGACTTAGTGGTGGAGTTAGCTGTAAGAAAGGTAAAACAGGCCCCTTTCAGTTaGGACGTGGGGAAGTTAATG +
Preference number: 4 (lower is better)
Translates to: GWIVLIDLVVELAVRKVKQAPFS*DVGKLM
Trigger: CATTAACTTCCCCACGTCTCAACTGAAAGGGGCCTG...TTTTACCTTTCTTACAGCTAACTCCACCACTAAGTCAATTAAAACAATCCATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000403080.5
CDS-3UTR GCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCACCAGCAAAGCTTTTaGATCACAGGGTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILHQQSF*ITGFHL
Trigger: GAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGACATGTGGCAAATGTTaGTTTAATAAAGTCACGGAA +
Preference number: 4 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLTCGKC*FNKVTE
Trigger: TTCCGTGACTTTATTAAAGCAACATTTGCCACATGT...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCAGAGTTACTGTAAGATaGCCAGCACTTTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILRVTVR*PALSSQ
Trigger: CTGGGAGGAAAGTGCTGGGCATCTTACAGTAACTCT...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTCCTGTCTACGTGTTCTaGTATGGATTCAATCCTTTT +
Preference number: 4 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLPVYVF*YGFNPF
Trigger: AAAAGGATTGAATCCATACCAGAACACGTAGACAGG...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTATCCAAAGCGTTTTCTaGAAAGGCCAGTCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLIQSVF*KGQSFN
Trigger: ATTAAAGGACTGGCCTTTCCAGAAAACGCTTTGGAT...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR TCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCGAGTGTATCCAATCATaGTCCCATTTGGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILECIQS*SHLDAQ
Trigger: CTGAGCATCCAAATGGGATCATGATTGGATACACTC...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR TCA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGATACGCATCTGTCACTaGCAAAGTTGGTTAATGCAA +
Preference number: 4 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGIRICH*QSWLMQ
Trigger: TTGCATTAACCAACTTTGTCAGTGACAGATGCGTAT...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR GCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCATAAACATGGTAGTTaGCACCATCCAGGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILHKHGS*HHPGCF
Trigger: GAAGCAACCTGGATGGTGGCAACTACCATGTTTATG...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR GCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTCGTCTTCAGAGTCAATaGAGCTCACATCTTAGATAT +
Preference number: 4 (lower is better)
Translates to: RLITDRLILVSETILFVFRLQSQ*SSHLRY
Trigger: ATATCTAAGATGTGAGCTGCATTGACTCTGAAGACG...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp GGATGGATTGTTTTAATTGACTTAGTGGTGGAGTTAGCTGTAAGAAAGGTAAAACCTGCAGCATCACGTTaGAGAAGTATAGGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: GWIVLIDLVVELAVRKVKPAASR*RSIGLR
Trigger: ACGGAGACCTATACTTCTCCAACGTGATGCTGCAGG...TTTTACCTTTCTTACAGCTAACTCCACCACTAAGTCAATTAAAACAATCCATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403080.5
CDS-3UTR TCA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCAATTGGCTGAGAAGATaGTATCTGCTAGAGATGGAA +
Preference number: 4 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILNWLRR*YLLEME
Trigger: TTCCATCTCTAGCAGATATCATCTTCTCAGCCAATT...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR GCA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTACATGTGGCAAATGTTaGTTTAATAAAGTCACGGAA +
Preference number: 4 (lower is better)
Translates to: RLITDRLILVSETILFVFTCGKC*FNKVTE
Trigger: TTCCGTGACTTTATTAAAGCAACATTTGCCACATGT...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CCA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAACCTGTCTACGTGTTCTaGTATGGATTCAATCCTTTT +
Preference number: 4 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKPVYVF*YGFNPF
Trigger: AAAAGGATTGAATCCATACCAGAACACGTAGACAGG...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS GCA 90 bp CCAAGGGCTCGGGCTCCGGCCCTGGGCGCTGTCCGAGCTGTCCGCTaGCGGCGCCGCCACTTCCCCCGCGTCCCCTGCAGCGCCTCTCGC +
Preference number: 5 (lower is better)
Translates to: PRARAPALGAVRAVR*RRRHFPRVPCSASR
Trigger: GCGAGAGGCGCTGCAGGGGACGCGGGGGAAGTGGCGGCGCCGGCAGCGGACAGCTCGGACAGCGCCCAGGGCCGGAGCCCGAGCCCTTGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000404977.6
CDS-3UTR CAA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCACGGTCTGGCCGTCCTTaGGGCAGGGCAGCCAAACGG +
Preference number: 5 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPRSGRP*GRAAKR
Trigger: CCGTTTGGCTGCCCTGCCCAAAGGACGGCCAGACCG...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCATCCCGACTTCAGGGCTaGCCAGGGGCAGGGGCAATG +
Preference number: 5 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPSRLQG*PGAGAM
Trigger: CATTGCCCCTGCCCCTGGCAAGCCCTGAAGTCGGGA...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGTCCCAGGGTGGCAGCTaGCATGGGCCCTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: PRADSVVERSGWLRDRARSQGGS*HGPCCL
Trigger: GAGGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGA...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCACTCCCCTCCTCCCACTaGCAAAGTGGTGGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPLPSSH*QSGGCA
Trigger: GGCACAGCCACCACTTTGCAAGTGGGAGGAGGGGAG...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCGCCACACCGTGGTTCTaGACTGCTCTGTCCCGCCCA +
Preference number: 5 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLATPWF*TALSRP
Trigger: TGGGCGGGACAGAGCAGTCAAGAACCACGGTGTGGC...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCATCCTGGTGGGGTCTTaGACCTCCAGGCGGACTTGG +
Preference number: 5 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLILVGS*TSRRTW
Trigger: CCAAGTCCGCCTGGAGGTCAAAGACCCCACCAGGAT...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGCCCCACACTGTGACGTaGTTCCAGGCCTCTCGAGTC +
Preference number: 5 (lower is better)
Translates to: ADSVVERSGWLRDRARGQPHTVT*FQASRV
Trigger: GACTCGAGAGGCCTGGAACAACGTCACAGTGTGGGG...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGTCTCGTACTGGGTACTaGCCGCCGCGACTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAASRTGY*PPRLLL
Trigger: CAAGAGGAGTCGCGGCGGCAAGTACCCAGTACGAGA...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCGAGCCATCCTCTTCCTaGGGGTCTTCAGGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLEPSSS*GSSGPR
Trigger: CCTTGGCCCTGAAGACCCCAAGGAAGAGGATGGCTC...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGAGCCATCCTCTTCCTaGGGGTCTTCAGGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPEPSSS*GSSGPR
Trigger: CCTTGGCCCTGAAGACCCCAAGGAAGAGGATGGCTC...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCTCCCCTCCTCCCACTaGCAAAGTGGTGGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: PAELSHGSSSPTLVAPGALPSSH*QSGGCA
Trigger: GGCACAGCCACCACTTTGCAAGTGGGAGGAGGGGAG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGTCATTGGGAGGGGGCTaGTGGGTGGCTTGGTGGCTA +
Preference number: 5 (lower is better)
Translates to: ADSVVERSGWLRDRARGQSLGGG*WVAWWL
Trigger: TAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGA...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGCCTCCATGCTACTCCTaGGCCACCACGCAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAAPPCYS*ATTQSS
Trigger: TGAGCTCTGCGTGGTGGCCAAGGAGTAGCATGGAGG...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS TCA 90 bp CCATGGGGGCTGTGGAAGGAGCCCCATGCTAGGAGACTGGAGCCCTaGGCCTCGGAGGGTCTGCCTCTAGCCACCAGGTGGCCCTGGCAA +
Preference number: 5 (lower is better)
Translates to: PWGLWKEPHARRLEP*ASEGLPLATRWPWQ
Trigger: TTGCCAGGGCCACCTGGTGGCTAGAGGCAGACCCTCCGAGGCTCAGGGCTCCAGTCTCCTAGCATGGGGCTCCTTCCACAGCCCCCATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514644.5
CDS-3UTR CAA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGTCCTTCGCTGACTGCTaGGTGATGGTTGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: PRADSVVERSGWLRDRARSFADC*VMVGGC
Trigger: GCAGCCGCCAACCATCACCAAGCAGTCAGCGAAGGA...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTATCCTGGTGGGGTCTTaGACCTCCAGGCGGACTTGG +
Preference number: 5 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAILVGS*TSRRTW
Trigger: CCAAGTCCGCCTGGAGGTCAAAGACCCCACCAGGAT...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTACGCTGCCGGGGTACTaGGAATGGTCATGCCAGACC +
Preference number: 5 (lower is better)
Translates to: DSVVERSGWLRDRARGQATLPGY*EWSCQT
Trigger: GGTCTGGCATGACCATTCCAAGTACCCCGGCAGCGT...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAACGCTGCCGGGGTACTaGGAATGGTCATGCCAGACC +
Preference number: 5 (lower is better)
Translates to: GQGRTVWWNARGGCETGQTLPGY*EWSCQT
Trigger: GGTCTGGCATGACCATTCCAAGTACCCCGGCAGCGT...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGCCGCCGCGACTCCTCTaGATGAAACAGACGATGAGC +
Preference number: 5 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAAPPRLL*MKQTMS
Trigger: GCTCATCGTCTGTTTCATCAAGAGGAGTCGCGGCGG...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAATCTCGTACTGGGTACTaGCCGCCGCGACTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: GQGRTVWWNARGGCETGQSRTGY*PPRLLL
Trigger: CAAGAGGAGTCGCGGCGGCAAGTACCCAGTACGAGA...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCCTCCCCTCCTCCCACTaGCAAAGTGGTGGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: SISSRVAAWALATWTGALLPSSH*QSGGCA
Trigger: GGCACAGCCACCACTTTGCAAGTGGGAGGAGGGGAG...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCATGCCCGTGCCATTGCTaGGGCAAAGTTTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPCPCHC*GKVSHS
Trigger: GGAGTGGGAAACTTTGCCCAAGCAATGGCACGGGCA...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS CCA 90 bp CTCAGCGCTGGTCTACTGGCTAGAGTGGTGGGCTGGGGAAGGATGTaGGCAGCTTGTGAAGCTGCCTGGGATCCCGGGGTGACGCAGCGG +
Preference number: 5 (lower is better)
Translates to: LSAGLLARVVGWGRM*AACEAAWDPGVTQR
Trigger: CCGCTGCGTCACCCCGGGATCCCAGGCAGCTTCACAAGCTGCCCACATCCTTCCCCAGCCCACCACTCTAGCCAGTAGACCAGCGCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS-3UTR CAA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTGACACCCGGGGGTCCTaGGCGATGTTGAAGAATCTG +
Preference number: 5 (lower is better)
Translates to: DSVVERSGWLRDRARGQADTRGS*AMLKNL
Trigger: CAGATTCTTCAACATCGCCAAGGACCCCCGGGTGTC...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTTGCAGGCGGATCCTATaGGACAGGGCCGTGCCAAAT +
Preference number: 5 (lower is better)
Translates to: PAELSHGSSSPTLVAPGACRRIL*DRAVPN
Trigger: ATTTGGCACGGCCCTGTCCAATAGGATCCGCCTGCA...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCACTGGACAGTGGGTTaGGGGTTTCCATTGGCTCGA +
Preference number: 5 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLHWTVG*GFPLAR
Trigger: TCGAGCCAATGGAAACCCCAAACCCACTGTCCAGTG...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCACACTGGACAGTGGGTTaGGGGTTTCCATTGGCTCGA +
Preference number: 5 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPHWTVG*GFPLAR
Trigger: TCGAGCCAATGGAAACCCCAAACCCACTGTCCAGTG...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGACCTCCAGGCGGACTaGGTTTTCAGCTTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: PRADSVVERSGWLRDRARDLQAD*VFSFAQ
Trigger: CTGGGCAAAGCTGAAAACCAAGTCCGCCTGGAGGTC...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTGACCTCCAGGCGGACTaGGTTTTCAGCTTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: DSVVERSGWLRDRARGQADLQAD*VFSFAQ
Trigger: CTGGGCAAAGCTGAAAACCAAGTCCGCCTGGAGGTC...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACGGTCTGGCCGTCCTTaGGGCAGGGCAGCCAAACGG +
Preference number: 5 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRRSGRP*GRAAKR
Trigger: CCGTTTGGCTGCCCTGCCCAAAGGACGGCCAGACCG...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000504476.5
CDS-3UTR CAA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCATTGATTGTCTCCAGGTaGGGCTGCCGGACTCGGAAA +
Preference number: 5 (lower is better)
Translates to: WWNARGGCETGQGARLPPLIVSR*GCRTRK
Trigger: TTTCCGAGTCCGGCAGCCCAACCTGGAGACAATCAA...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CAA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCCTCTGAGCTTTCGTaGCCCTCTGTTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PRPRADSVVERSGWLRDRASELS*PSVSSL
Trigger: CAAGGAGGAAACAGAGGGCAACGAAAGCTCAGAGGC...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTA +
Preference number: 5 (lower is better)
Translates to: PRPRADSVVERSGWLRDRTGPHS*ADPHIV
Trigger: TACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGT...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCTCATTGGGAGGGGGCTaGTGGGTGGCTTGGTGGCTA +
Preference number: 5 (lower is better)
Translates to: SISSRVAAWALATWTGALSLGGG*WVAWWL
Trigger: TAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGA...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAGACAGGTTAAGGAGCTaGCCCCAAGAGGCAGAGCAA +
Preference number: 5 (lower is better)
Translates to: WWNARGGCETGQGARLPPDRLRS*PQEAEQ
Trigger: TTGCTCTGCCTCTTGGGGCAAGCTCCTTAACCTGTC...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGGGCTCAGTTGCACCTaGCAGGGCAAGCAATGTTGG +
Preference number: 5 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAGLSCT*QGKQCW
Trigger: CCAACATTGCTTGCCCTGCAAGGTGCAACTGAGCCC...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTCTGACTCTGCCCGGCTaGCCTATGCCTCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTALTLPG*PMPPRA
Trigger: GGCCCTGGGAGGCATAGGCAAGCCGGGCAGAGTCAG...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GCAGGACACTGGAACGAGGTGCAGAGGCAGGCTGCGGGCTTACTTCTCCCCAAGCTGACTCTGCCCGGCTaGCCTATGCCTCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: AGHWNEVQRQAAGLLLPKLTLPG*PMPPRA
Trigger: GGCCCTGGGAGGCATAGGCAAGCCGGGCAGAGTCAG...CTTGGGGAGAAGTAAGCCCGCAGCCTGCCTCTGCACCTCGTTCCAGTGTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCGGTGGCGATGTCCGCTaGGTTGTTGGTGTAAGCTTC +
Preference number: 5 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLGGDVR*VVGVSF
Trigger: GAAGCTTACACCAACAACCAAGCGGACATCGCCACC...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425360.5
ENST00000504476.5
CDS TCA 90 bp TGTGGGAGGAGCTGCGGTTGGAGTAGCTTCATTCGGGGGTGCTGGTaGCTCCTCTGTGACGGCTTCCCCAGAGCCCACCTGCGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: CGRSCGWSSFIRGCW*LLCDGFPRAHLRPG
Trigger: GCCAGGACGCAGGTGGGCTCTGGGGAAGCCGTCACAGAGGAGTCACCAGCACCCCCGAATGAAGCTACTCCAACCGCAGCTCCTCCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000492085.1
CDS GCA 90 bp CTGGTGTTGGGACCCCGGAGGCGATGCATTCCAGCAGGAGGTCCATaGCACGAAGCACCATCTGGCTGCTCGCGGTGCCCTGGGGATACA +
Preference number: 5 (lower is better)
Translates to: LVLGPRRRCIPAGGP*HEAPSGCSRCPGDT
Trigger: TGTATCCCCAGGGCACCGCGAGCAGCCAGATGGTGCTTCGTGGCATGGACCTCCTGCTGGAATGCATCGCCTCCGGGGTCCCAACACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 90 bp CCTGGCCCCTCTTCTCCTGCCTCAGCGCTGGTCTACTGGCTAGAGTaGTGGGCTGGGGAAGGATGTGGGCAGCTTGTGAAGCTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: PGPSSPASALVYWLE*WAGEGCGQLVKLPG
Trigger: CCCAGGCAGCTTCACAAGCTGCCCACATCCTTCCCCAGCCCACCACTCTAGCCAGTAGACCAGCGCTGAGGCAGGAGAAGAGGGGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS-3UTR CAA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGGGGCAGGGTTCCCTTTaGCTTCACACTCAATCAGGA +
Preference number: 5 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAAGQGSL*LHTQSG
Trigger: TCCTGATTGAGTGTGAAGCAAAAGGGAACCCTGCCC...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCGGGCAGGGTTCCCTTTaGCTTCACACTCAATCAGGA +
Preference number: 5 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLGQGSL*LHTQSG
Trigger: TCCTGATTGAGTGTGAAGCAAAAGGGAACCCTGCCC...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGTCCTGCAGCATCACGTaGGAGAAGTATAGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: ADSVVERSGWLRDRARGQSCSIT*EKYRSP
Trigger: CGGAGACCTATACTTCTCCAACGTGATGCTGCAGGA...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGGGTTTGGGGTTTCCATaGGCTCGACACACCAGTCTC +
Preference number: 5 (lower is better)
Translates to: QLSSATAPALPHWWHPGLGLGFP*ARHTSL
Trigger: GAGACTGGTGTGTCGAGCCAATGGAAACCCCAAACC...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTGGTTTGGGGTTTCCATaGGCTCGACACACCAGTCTC +
Preference number: 5 (lower is better)
Translates to: DSVVERSGWLRDRARGQAGLGFP*ARHTSL
Trigger: GAGACTGGTGTGTCGAGCCAATGGAAACCCCAAACC...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGCACTGGACAGTGGGTTaGGGGTTTCCATTGGCTCGA +
Preference number: 5 (lower is better)
Translates to: PRADSVVERSGWLRDRARHWTVG*GFPLAR
Trigger: TCGAGCCAATGGAAACCCCAAACCCACTGTCCAGTG...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAATTGATTGTCTCCAGGTaGGGCTGCCGGACTCGGAAA +
Preference number: 5 (lower is better)
Translates to: GQGRTVWWNARGGCETGQLIVSR*GCRTRK
Trigger: TTTCCGAGTCCGGCAGCCCAACCTGGAGACAATCAA...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CAA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGCCTCTGAGCTTTCGTaGCCCTCTGTTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RVPRPRADSVVERSGWLRASELS*PSVSSL
Trigger: CAAGGAGGAAACAGAGGGCAACGAAAGCTCAGAGGC...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCTCCCCTCCTCCCACTaGCAAAGTGGTGGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTLPSSH*QSGGCA
Trigger: GGCACAGCCACCACTTTGCAAGTGGGAGGAGGGGAG...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGCCCCATATCGTACCCTaGTTACTGAAGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAAPHIVP*LLKVVV
Trigger: CACCACCACCTTCAGTAACAAGGGTACGATATGGGG...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCGGGCTTGTGGGTGGCTaGGTGGCTACTGGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTGLVGG*VATGPH
Trigger: GTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGTCATTGGGAGGGGGCTaGTGGGTGGCTTGGTGGCTA +
Preference number: 5 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVSLGGG*WVAWWL
Trigger: TAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGA...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGCCTCCATGCTACTCCTaGGCCACCACGCAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: ASQGSISSRVAAWALATWPPCYS*ATTQSS
Trigger: TGAGCTCTGCGTGGTGGCCAAGGAGTAGCATGGAGG...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS TCA 90 bp AGCATCCCTGCCCACCAGCATGGCTCTGAAGCCATCCAGGCTTCCTaGGGGTGGGGACTGGACCAAGTGGAGGCCCAGGATGCCCTGTCA +
Preference number: 5 (lower is better)
Translates to: SIPAHQHGSEAIQAS*GWGLDQVEAQDALS
Trigger: TGACAGGGCATCCTGGGCCTCCACTTGGTCCAGTCCCCACCCTCAGGAAGCCTGGATGGCTTCAGAGCCATGCTGGTGGGCAGGGATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503221.1
CDS GCA 90 bp ACCGCACATACACCCCGGAGGCGATGCATTCCAGCAGGAGGTCCATaGCACGAAGCACCATCTGGCTGCTCGCGGTGCCCTGGGGATACA +
Preference number: 5 (lower is better)
Translates to: TAHTPRRRCIPAGGP*HEAPSGCSRCPGDT
Trigger: TGTATCCCCAGGGCACCGCGAGCAGCCAGATGGTGCTTCGTGGCATGGACCTCCTGCTGGAATGCATCGCCTCCGGGGTGTATGTGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS CCA 90 bp GACCCCGTCTGGGCCTGGGCCAGGCCACGGGACCTGACCCTTCTGTaGAAAGCACCAGACACGATGACTTGTCAGCTTCCAGAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: DPVWAWARPRDLTLL*KAPDTMTCQLPECP
Trigger: TGGGCACTCTGGAAGCTGACAAGTCATCGTGTCTGGTGCTTTCCACAGAAGGGTCAGGTCCCGTGGCCTGGCCCAGGCCCAGACGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CCA 90 bp GGCCCCTCTTCTCCTGCCTCAGCGCTGGTCTACTGGCTAGAGTGGTaGGCTGGGGAAGGATGTGGGCAGCTTGTGAAGCTGCCTGGGATC +
Preference number: 5 (lower is better)
Translates to: GPSSPASALVYWLEW*AGEGCGQLVKLPGI
Trigger: GATCCCAGGCAGCTTCACAAGCTGCCCACATCCTTCCCCAGCCCACCACTCTAGCCAGTAGACCAGCGCTGAGGCAGGAGAAGAGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS-3UTR CAA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACATCCTTCGCTGACTGCTaGGTGATGGTTGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: SQGSISSRVAAWALATWTSFADC*VMVGGC
Trigger: GCAGCCGCCAACCATCACCAAGCAGTCAGCGAAGGA...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGGACACCCGGGGGTCCTaGGCGATGTTGAAGAATCTG +
Preference number: 5 (lower is better)
Translates to: ASQGSISSRVAAWALATWDTRGS*AMLKNL
Trigger: CAGATTCTTCAACATCGCCAAGGACCCCCGGGTGTC...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTTCCTGCAGCATCACGTaGGAGAAGTATAGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: PAELSHGSSSPTLVAPGASCSIT*EKYRSP
Trigger: CGGAGACCTATACTTCTCCAACGTGATGCTGCAGGA...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCGGGTGGTGAGGACCTaGAGGGTGAAAGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVRVVRT*RVKGFF
Trigger: GAAGAACCCTTTCACCCTCAAGGTCCTCACCACCCG...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGTTAGGTGGTGCCGATaGCAAAGGTTCCCCATTCAC +
Preference number: 5 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAVRWCR*QRFPIH
Trigger: GTGAATGGGGAACCTTTGCAATCGGCACCACCTAAC...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTCGGTCTGGCCGTCCTTaGGGCAGGGCAGCCAAACGG +
Preference number: 5 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPRSGRP*GRAAKR
Trigger: CCGTTTGGCTGCCCTGCCCAAAGGACGGCCAGACCG...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAACTGCTCCCAACCTCGTaGATGGCAATGACACGGAAC +
Preference number: 5 (lower is better)
Translates to: AELSHGSSSPTLVAPGAELLPTS*MAMTRN
Trigger: GTTCCGTGTCATTGCCATCAACGAGGTTGGGAGCAG...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCACACGTGATCTCCATGTaGTTCTTTCTGGTCCCCTCT +
Preference number: 5 (lower is better)
Translates to: WWNARGGCETGQGARLPPHVISM*FFLVPS
Trigger: AGAGGGGACCAGAAAGAACAACATGGAGATCACGTG...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCTTGATTGTCTCCAGGTaGGGCTGCCGGACTCGGAAA +
Preference number: 5 (lower is better)
Translates to: SISSRVAAWALATWTGALLIVSR*GCRTRK
Trigger: TTTCCGAGTCCGGCAGCCCAACCTGGAGACAATCAA...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CAA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGCACGGGGTCCGTTCTTaGCACCGTGAACTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: ASQGSISSRVAAWALATWHGVRS*HRELGL
Trigger: CAGACCAAGTTCACGGTGCAAAGAACGGACCCCGTG...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CAA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCTTGGCCCATTTACTGTaGGGGAGCACCGTGACGTTC +
Preference number: 5 (lower is better)
Translates to: SISSRVAAWALATWTGALLAHLL*GSTVTF
Trigger: GAACGTCACGGTGCTCCCCAACAGTAAATGGGCCAA...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGCCGCCGCGACTCCTCTaGATGAAACAGACGATGAGC +
Preference number: 5 (lower is better)
Translates to: ASQGSISSRVAAWALATWPPRLL*MKQTMS
Trigger: GCTCATCGTCTGTTTCATCAAGAGGAGTCGCGGCGG...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGTCCTCCTTGTCCTTTTaGACCGTGTACTGGCCGATG +
Preference number: 5 (lower is better)
Translates to: PRADSVVERSGWLRDRARSSLSF*TVYWPM
Trigger: CATCGGCCAGTACACGGTCAAAAAGGACAAGGAGGA...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp GCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGCCCTCTGTTTCCTCCTaGTCCTTTTTGACCGTGTAC +
Preference number: 5 (lower is better)
Translates to: AEAKGGQCGGTLGVAARPPSVSS*SFLTVY
Trigger: GTACACGGTCAAAAAGGACAAGGAGGAAACAGAGGG...CGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCGCCTCTGAGCTTTCGTaGCCCTCTGTTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SISSRVAAWALATWTGALASELS*PSVSSL
Trigger: CAAGGAGGAAACAGAGGGCAACGAAAGCTCAGAGGC...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTGGGCTTGTGGGTGGCTaGGTGGCTACTGGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTAGLVGG*VATGPH
Trigger: GTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGCGAGAAAGGCATCCTTaGGAAATGCATTGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAARERHP*EMHWPR
Trigger: TCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTCG...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS TCA 90 bp GTTGGTGTAAGCTGCGGTTGGAGTAGCTTCATTCGGGGGTGCTGGTaGCTCCTCTGTGACGGCTTCCCCAGAGCCCACCTGCGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: VGVSCGWSSFIRGCW*LLCDGFPRAHLRPG
Trigger: GCCAGGACGCAGGTGGGCTCTGGGGAAGCCGTCACAGAGGAGTCACCAGCACCCCCGAATGAAGCTACTCCAACCGCAGCTTACACCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367173.7
ENST00000404076.5
ENST00000430393.7
ENST00000539706.6
CDS-3UTR CAA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCACTCCAGCGTCCCAAATaGCACATAAGTCAATCAACC +
Preference number: 5 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPLQRPK*HISQST
Trigger: GGTTGATTGACTTATGTGCAATTTGGGACGCTGGAG...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000404076.5
CDS-3UTR CAA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGGGGTCCTTGGCGATGTaGAAGAATCTGCTGTTTCGT +
Preference number: 5 (lower is better)
Translates to: QLSSATAPALPHWWHPGLGSLAM*KNLLFR
Trigger: ACGAAACAGCAGATTCTTCAACATCGCCAAGGACCC...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp CGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGGGTCTAGGTTTTCCTaGGGCCACAGAGGAGATTTA +
Preference number: 5 (lower is better)
Translates to: RVPRPRADSVVERSGWLRGSRFS*GHRGDL
Trigger: TAAATCTCCTCTGTGGCCCAAGGAAAACCTAGACCC...TCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGGTCTAGGTTTTCCTaGGGCCACAGAGGAGATTTA +
Preference number: 5 (lower is better)
Translates to: PRADSVVERSGWLRDRARGSRFS*GHRGDL
Trigger: TAAATCTCCTCTGTGGCCCAAGGAAAACCTAGACCC...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGGGTTTGGGGTTTCCATaGGCTCGACACACCAGTCTC +
Preference number: 5 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVGLGFP*ARHTSL
Trigger: GAGACTGGTGTGTCGAGCCAATGGAAACCCCAAACC...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAGTTAGGTGGTGCCGATaGCAAAGGTTCCCCATTCAC +
Preference number: 5 (lower is better)
Translates to: AELSHGSSSPTLVAPGAEVRWCR*QRFPIH
Trigger: GTGAATGGGGAACCTTTGCAATCGGCACCACCTAAC...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCGACCTCCAGGCGGACTaGGTTTTCAGCTTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTDLQAD*VFSFAQ
Trigger: CTGGGCAAAGCTGAAAACCAAGTCCGCCTGGAGGTC...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACATCCTGGTGGGGTCTTaGACCTCCAGGCGGACTTGG +
Preference number: 5 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNILVGS*TSRRTW
Trigger: CCAAGTCCGCCTGGAGGTCAAAGACCCCACCAGGAT...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAACACGTGATCTCCATGTaGTTCTTTCTGGTCCCCTCT +
Preference number: 5 (lower is better)
Translates to: GQGRTVWWNARGGCETGQHVISM*FFLVPS
Trigger: AGAGGGGACCAGAAAGAACAACATGGAGATCACGTG...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATCCCCACACTGTGACGTaGTTCCAGGCCTCTCGAGTC +
Preference number: 5 (lower is better)
Translates to: GLVGGLVATGPHSLADPHPHTVT*FQASRV
Trigger: GACTCGAGAGGCCTGGAACAACGTCACAGTGTGGGG...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CAA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGATCTGCTTTCCTACTTaGGTCCCGTTAAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: PRPRADSVVERSGWLRDRICFPT*VPLKAT
Trigger: TGTGGCCTTTAACGGGACCAAAGTAGGAAAGCAGAT...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CAA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACACCGCCGCGACTCCTCTaGATGAAACAGACGATGAGC +
Preference number: 5 (lower is better)
Translates to: SQGSISSRVAAWALATWTPPRLL*MKQTMS
Trigger: GCTCATCGTCTGTTTCATCAAGAGGAGTCGCGGCGG...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGTCACTCTCCTGCTGCTaGATGGTGCCGTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: ASQGSISSRVAAWALATWSLSCC*MVPSRD
Trigger: ATCTCTGGACGGCACCATCAAGCAGCAGGAGAGTGA...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCCCTCTGTTTCCTCCTaGTCCTTTTTGACCGTGTAC +
Preference number: 5 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAPSVSS*SFLTVY
Trigger: GTACACGGTCAAAAAGGACAAGGAGGAAACAGAGGG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGGCCTCTGAGCTTTCGTaGCCCTCTGTTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ASQGSISSRVAAWALATWASELS*PSVSSL
Trigger: CAAGGAGGAAACAGAGGGCAACGAAAGCTCAGAGGC...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTA +
Preference number: 5 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVTGPHS*ADPHIV
Trigger: TACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGT...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGAAGAAAACAGAGACATaGGGTCTGGAGGGGAAGATG +
Preference number: 5 (lower is better)
Translates to: ADSVVERSGWLRDRARGQKKTET*GLEGKM
Trigger: CATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCTT...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGAAGAAAACAGAGACATaGGGTCTGGAGGGGAAGATG +
Preference number: 5 (lower is better)
Translates to: PRPRADSVVERSGWLRDRKKTET*GLEGKM
Trigger: CATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCTT...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGACACCAGCAAAGCTTTaGCATCACAGGGTTCCATCT +
Preference number: 5 (lower is better)
Translates to: PRPRADSVVERSGWLRDRTPAKL*HHRVPS
Trigger: AGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTGT...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGACACCAGCAAAGCTTTaGCATCACAGGGTTCCATCT +
Preference number: 5 (lower is better)
Translates to: ADSVVERSGWLRDRARGQTPAKL*HHRVPS
Trigger: AGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTGT...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATGTCCTGCCGGAACACTaGCATAGGCTGCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GLVGGLVATGPHSLADPHVLPEH*HRLPCS
Trigger: AGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGAC...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCACGCCTCAGCGTTaGATCTCTCTGACCACCTGC +
Preference number: 5 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRPTPQR*ISLTTC
Trigger: GCAGGTGGTCAGAGAGATCAAACGCTGAGGCGTGGG...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGCTCAAGCAGGATCCTTaGCCAACTAACGGTGTAGAT +
Preference number: 5 (lower is better)
Translates to: ACAEAKGGQCGGTLGVAALKQDP*PTNGVD
Trigger: ATCTACACCGTTAGTTGGCAAAGGATCCTGCTTGAG...CGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGGCACACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCCAGGCCTTGGTCTCCTCTaGACATATCAAGCTCTTTGT +
Preference number: 5 (lower is better)
Translates to: WWNARGGCETGQGARLPPGLGLL*TYQALC
Trigger: ACAAAGAGCTTGATATGTCAAGAGGAGACCAAGGCC...TGGAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS TCA 90 bp CCCATCAGGGAGTGCAGGCCGTGGCCACGTTGCAAAAACCTGCTATaGGAACACCTTCGCAGGCCTGCACAGGCACACGGCAGCATCCCT +
Preference number: 5 (lower is better)
Translates to: PIRECRPWPRCKNLL*EHLRRPAQAHGSIP
Trigger: AGGGATGCTGCCGTGTGCCTGTGCAGGCCTGCGAAGGTGTTCTCATAGCAGGTTTTTGCAACGTGGCCACGGCCTGCACTCCCTGATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503221.1
CDS GCA 90 bp TGGCTAGAAGAGGGGCTGCAAACCGCACATACACCCCGGAGGCGATaGATTCCAGCAGGAGGTCCATGCCACGAAGCACCATCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: WLEEGLQTAHTPRRR*IPAGGPCHEAPSGC
Trigger: GCAGCCAGATGGTGCTTCGTGGCATGGACCTCCTGCTGGAATGCATCGCCTCCGGGGTGTATGTGCGGTTTGCAGCCCCTCTTCTAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS CCA 90 bp CTGCTCCCCAGCACTCGGGGTCTTGTCACCTCGAGCCGCTTTAACTaGGCCTCCTGGACAGCACTCAGCTTCTCTGCCTCATTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LLPSTRGLVTSSRFN*ASWTALSFSASFSL
Trigger: GAGGCTGAATGAGGCAGAGAAGCTGAGTGCTGTCCAGGAGGCCCAGTTAAAGCGGCTCGAGGTGACAAGACCCCGAGTGCTGGGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000493914.5
ENST00000513543.6
ENST00000514644.5
ENST00000680427.1
CDS CCA 90 bp GGACGTGCCCCACCCTGCAAGCCCACGCCTCTTGCACATCTCACCTaGGTACTTGCCGCCGCGACTCCTCTTGATGAAACAGACGATGAG +
Preference number: 5 (lower is better)
Translates to: GRAPPCKPTPLAHLT*VLAAATPLDETDDE
Trigger: CTCATCGTCTGTTTCATCAAGAGGAGTCGCGGCGGCAAGTACCCAGGTGAGATGTGCAAGAGGCGTGGGCTTGCAGGGTGGGGCACGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS CCA 90 bp AGAGAGGGATGCAGAGCGGGCTGTCAGCCTTTCTCTGCTTCTGCCTaGCCCCTCTTCTCCTGCCTCAGCGCTGGTCTACTGGCTAGAGTG +
Preference number: 5 (lower is better)
Translates to: REGCRAGCQPFSASA*PLFSCLSAGLLARV
Trigger: CACTCTAGCCAGTAGACCAGCGCTGAGGCAGGAGAAGAGGGGCCAGGCAGAAGCAGAGAAAGGCTGACAGCCCGCTCTGCATCCCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CCA 90 bp CCCTGCTGTGGAAGGCCTGATCTCCTGGAACTTACCATCGCAGTGTaGGGATGGGAGACCCAAAGAAAGGGCAGTCCAGCCGCGTCCGGT +
Preference number: 5 (lower is better)
Translates to: PCCGRPDLLELTIAV*GWETQRKGSPAASG
Trigger: ACCGGACGCGGCTGGACTGCCCTTTCTTTGGGTCTCCCATCCCCACACTGCGATGGTAAGTTCCAGGAGATCAGGCCTTCCACAGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514644.5
CDS-3UTR CAA 90 bp TTCCAGGTTGATTGTCTCCAGGTTGGGCTGCCGGACTCGGAAACGCCTAGGGGCTCCTTCGCTGACTGCTaGGTGATGGTTGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: FQVDCLQVGLPDSETPRGSFADC*VMVGGC
Trigger: GCAGCCGCCAACCATCACCAAGCAGTCAGCGAAGGA...GCCCCTAGGCGTTTCCGAGTCCGGCAGCCCAACCTGGAGACAATCAACCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CAA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAGGGTCCTTGGCGATGTaGAAGAATCTGCTGTTTCGT +
Preference number: 5 (lower is better)
Translates to: AELSHGSSSPTLVAPGAEGSLAM*KNLLFR
Trigger: ACGAAACAGCAGATTCTTCAACATCGCCAAGGACCC...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp TGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGAGACACCCGGGGGTCCTaGGCGATGTTGAAGAATCTG +
Preference number: 5 (lower is better)
Translates to: WEGACGWLGGYWSSQLGRDTRGS*AMLKNL
Trigger: CAGATTCTTCAACATCGCCAAGGACCCCCGGGTGTC...TCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTGACACCCGGGGGTCCTaGGCGATGTTGAAGAATCTG +
Preference number: 5 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPDTRGS*AMLKNL
Trigger: CAGATTCTTCAACATCGCCAAGGACCCCCGGGTGTC...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACCGGATGCTGCCCATCTaGTTGGAGGCCAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNRMLPI*LEARQK
Trigger: TTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCG...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGACTTGGTTTTCAGCTTaGCCCAGGATGTTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVTWFSA*PRMLVA
Trigger: CGCCACCAACATCCTGGGCAAAGCTGAAAACCAAGT...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGTCCTCCTTGTCCTTTTaGACCGTGTACTGGCCGATG +
Preference number: 5 (lower is better)
Translates to: ASQGSISSRVAAWALATWSSLSF*TVYWPM
Trigger: CATCGGCCAGTACACGGTCAAAAAGGACAAGGAGGA...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAACCCTCTGTTTCCTCCTaGTCCTTTTTGACCGTGTAC +
Preference number: 5 (lower is better)
Translates to: AELSHGSSSPTLVAPGAEPSVSS*SFLTVY
Trigger: GTACACGGTCAAAAAGGACAAGGAGGAAACAGAGGG...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTGGGCTTGTGGGTGGCTaGGTGGCTACTGGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPGLVGG*VATGPH
Trigger: GTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTTGGCCCAGAGGTGGTTaGAATATTACAGCCTGTCTA +
Preference number: 5 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAWPRGG*NITACL
Trigger: TAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTTCCTTTGGAAATGCATaGGCCCAGAGGTGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: DSVVERSGWLRDRARGQASFGNA*AQRWFE
Trigger: TTCAAACCACCTCTGGGCCAATGCATTTCCAAAGGA...AGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAACGAGAAAGGCATCCTTaGGAAATGCATTGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: AELSHGSSSPTLVAPGAERERHP*EMHWPR
Trigger: TCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTCG...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGACACCAGCAAAGCTTTaGCATCACAGGGTTCCATCT +
Preference number: 5 (lower is better)
Translates to: PRADSVVERSGWLRDRARTPAKL*HHRVPS
Trigger: AGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTGT...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGGTCCTGCCGGAACACTaGCATAGGCTGCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVVLPEH*HRLPCS
Trigger: AGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGAC...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGGCTCCCTCGTTCAAACAACCTTATaGGCTCAGTTCTGGGCTATG +
Preference number: 5 (lower is better)
Translates to: CGGTLGVAARPGKGPGSLVQTTL*AQFWAM
Trigger: CATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAAC...GAGGGAGCCTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCGTTTACCCTGTCCCCTaGCACTGTGATAAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTVYPVP*HCDKLP
Trigger: GGGCAGCTTATCACAGTGCAAGGGGACAGGGTAAAC...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCGTCCTGGCTTCACTGTaGGTATGTCTTGGGGTAGTT +
Preference number: 5 (lower is better)
Translates to: SISSRVAAWALATWTGALVLASL*VCLGVV
Trigger: AACTACCCCAAGACATACCAACAGTGAAGCCAGGAC...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTGCTATGTGGGCTCAGTaGCACCTTGCAGGGCAAGCA +
Preference number: 5 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTAAMWAQ*HLAGQA
Trigger: TGCTTGCCCTGCAAGGTGCAACTGAGCCCACATAGC...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp AGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTGCTCTGTGGGGAGCGGTGCCTaGTGCCGGCCTCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: RLRKQDCFSSHTVVLDCSVGSGA*CRPPRN
Trigger: GTTCCTGGGAGGCCGGCACAAGGCACCGCTCCCCAC...AGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CCGAGGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGCCTAAGCTAGATGCCTaGTACCTATTTCCATTCTCC +
Preference number: 5 (lower is better)
Translates to: PRPRADSVVERSGWLRDRPKLDA*YLFPFS
Trigger: GGAGAATGGAAATAGGTACAAGGCATCTAGCTTAGG...CCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGTCCCAGGGTGGCAGCTaGCATGGGCCCTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LADPHIVPLLLKVVVASWSQGGS*HGPCCL
Trigger: GAGGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGA...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATGGTGGCGATGTCCGCTaGGTTGTTGGTGTAAGCTGC +
Preference number: 5 (lower is better)
Translates to: GLVGGLVATGPHSLADPHGGDVR*VVGVSC
Trigger: GCAGCTTACACCAACAACCAAGCGGACATCGCCACC...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367173.7
ENST00000404076.5
CDS-3UTR CAA 90 bp GATGACGGACTCTGGCTCAGGGCCCTTCCCGAAGTCATTTTCAGCCTGGACTCGGGGGTGGTGAACTCCTaGGTCTCACTGCGAGGCCCA +
Preference number: 5 (lower is better)
Translates to: DDGLWLRALPEVIFSLDSGVVNS*VSLRGP
Trigger: TGGGCCTCGCAGTGAGACCAAGGAGTTCACCACCCC...CGAGTCCAGGCTGAAAATGACTTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS TCA 90 bp TCCCAGACCTCCTCCTCATGGACACCCGGGGGTCCTTGGCGATGTTaGAGAATCTGCTGTTTCGTGTCCAGTGGAAGCTGGGGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: SQTSSSWTPGGPWRC*RICCFVSSGSWGQG
Trigger: ACCCTGCCCCCAGCTTCCACTGGACACGAAACAGCAGATTCTTCAACATCGCCAAGGACCCCCGGGTGTCCATGAGGAGGAGGTCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000505079.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS TCA 90 bp AGAAAGGGCAGTCCAGCCGCGTCCGGTTGTAAAGAATCACTCGAATaGGCTGGTTCCGGGGCGACAGCATCCGAGGCGGCACATCCAGCA +
Preference number: 5 (lower is better)
Translates to: RKGSPAASGCKESLE*AGSGATASEAAHPA
Trigger: TGCTGGATGTGCCGCCTCGGATGCTGTCGCCCCGGAACCAGCTCATTCGAGTGATTCTTTACAACCGGACGCGGCTGGACTGCCCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS TCA 90 bp CGCATTTGCTACCCCTGGCCCTGGTTAGTGAGCTGGGTAGTTAGGTaGGTCCGGAGCTGGCTTCCTCACTCGGTACTCTCTGAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: RICYPWPWLVSWVVR*VRSWLPHSVLSELA
Trigger: GGCCAGCTCAGAGAGTACCGAGTGAGGAAGCCAGCTCCGGACTCACCTAACTACCCAGCTCACTAACCAGGGCCAGGGGTAGCAAATGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471392.1
CDS TCA 90 bp TCACGCTGTCTTCCTTCTGGAGTGCTCGGCTCTGAGCTGACTGCCTaGCATGTAGCTGGAGGCGGTCCTAACATCTGGAACCTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: SRCLPSGVLGSELTA*HVAGGGPNIWNLGA
Trigger: GGCCCCCAGGTTCCAGATGTTAGGACCGCCTCCAGCTACATGTCAGGCAGTCAGCTCAGAGCCGAGCACTCCAGAAGGAAGACAGCGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS GCA 90 bp CGAAGCACTGATATTCCCCCTCATATTCCTCCGGCCGCCCGCCACTaGGGAAGTCAATCACCAGGGTCCCAGACCTCCTCCTCATGGACA +
Preference number: 5 (lower is better)
Translates to: RSTDIPPHIPPAARH*GSQSPGSQTSSSWT
Trigger: TGTCCATGAGGAGGAGGTCTGGGACCCTGGTGATTGACTTCCGCAGTGGCGGGCGGCCGGAGGAATATGAGGGGGAATATCAGTGCTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000505079.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS GCA 90 bp AGCTACCCATCAGGGAGTGCAGGCCGTGGCCACGTTGCAAAAACCTaGTATGAGAACACCTTCGCAGGCCTGCACAGGCACACGGCAGCA +
Preference number: 5 (lower is better)
Translates to: SYPSGSAGRGHVAKT*YENTFAGLHRHTAA
Trigger: TGCTGCCGTGTGCCTGTGCAGGCCTGCGAAGGTGTTCTCATAGCAGGTTTTTGCAACGTGGCCACGGCCTGCACTCCCTGATGGGTAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503221.1
CDS-3UTR CAA 90 bp GGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCATTAAAGTTCTCAAACTaGGCCTTATCAGATGGGAGG +
Preference number: 5 (lower is better)
Translates to: GGQCGGTLGVAARPGKGPLKFSN*ALSDGR
Trigger: CCTCCCATCTGATAAGGCCAAGTTTGAGAACTTTAA...TGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGCGGATGCTGCCCATCTaGTTGGAGGCCAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: PVTNRKGERVPRPRADSVRMLPI*LEARQK
Trigger: TTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCG...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAAATCCAGGTTGCTTCCTaGCCCATTCTTAAACCATCG +
Preference number: 5 (lower is better)
Translates to: AELSHGSSSPTLVAPGAEIQVAS*PILKPS
Trigger: CGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGAT...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCCCCACACTGTGACGTaGTTCCAGGCCTCTCGAGTC +
Preference number: 5 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHPHTVT*FQASRV
Trigger: GACTCGAGAGGCCTGGAACAACGTCACAGTGTGGGG...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCTCACTCTCCTGCTGCTaGATGGTGCCGTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: LNSSPANPRVAACMGPAASLSCC*MVPSRD
Trigger: ATCTCTGGACGGCACCATCAAGCAGCAGGAGAGTGA...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CTGCCCCACCACGTAGCGAGAGCCCCACACTGTGACGTTGTTCCAGGCCTCTCGTCCTCCTTGTCCTTTTaGACCGTGTACTGGCCGATG +
Preference number: 5 (lower is better)
Translates to: LPHHVARAPHCDVVPGLSSSLSF*TVYWPM
Trigger: CATCGGCCAGTACACGGTCAAAAAGGACAAGGAGGA...CGAGAGGCCTGGAACAACGTCACAGTGTGGGGCTCTCGCTACGTGGTGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CAA 90 bp ATGGTCAAGGGAGGGCACTGGTCTGACTCTGCCCGGCTTGCCTATGCCTCCCAGGCCTCTGAGCTTTCGTaGCCCTCTGTTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: MVKGGHWSDSARLAYASQASELS*PSVSSL
Trigger: CAAGGAGGAAACAGAGGGCAACGAAAGCTCAGAGGC...CTGGGAGGCATAGGCAAGCCGGGCAGAGTCAGACCAGTGCCCTCCCTTGACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGCCCTCTCCTTTGGAAATGCATaGGCCCAGAGGTGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: SISSRVAAWALATWTGALSFGNA*AQRWFE
Trigger: TTCAAACCACCTCTGGGCCAATGCATTTCCAAAGGA...GAGGGCACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTCAGACCTGCTCAGTCTaGGGGCAAGTCCCCATCCAC +
Preference number: 5 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPQTCSV*GQVPIH
Trigger: GTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTG...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCGTGTGGCAGGGGAGCTaGTCCGTTAGCTGGGAAACC +
Preference number: 5 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIVWQGS*SVSWET
Trigger: GGTTTCCCAGCTAACGGACAAGCTCCCCTGCCACAC...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGGGCCAGACCAGCTATGTGATCTaGAGCAAAAATCCCTTCACT +
Preference number: 5 (lower is better)
Translates to: ADSVVERSGWLRDRARGQTSYVI*SKNPFT
Trigger: AGTGAAGGGATTTTTGCTCAAGATCACATAGCTGGT...CTGGCCCCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAACAGACAGACTGATCTaGGTCTCAGAAACAATCCTG +
Preference number: 5 (lower is better)
Translates to: GQGRTVWWNARGGCETGQTDRLI*VSETIL
Trigger: CAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGT...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS TCA 90 bp ATCCTATTGGACAGGGCCGTGCCAAATTTGTTGCGGGCGAAGCACTaGTATTCCCCCTCATATTCCTCCGGCCGCCCGCCACTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: ILLDRAVPNLLRAKH*YSPSYSSGRPPLRK
Trigger: CTTCCGCAGTGGCGGGCGGCCGGAGGAATATGAGGGGGAATATCAGTGCTTCGCCCGCAACAAATTTGGCACGGCCCTGTCCAATAGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS TCA 90 bp GGGTCTCCCCGAACTGGAAGAACAGAGCTTCCTGGCCTGGCTGCATaGTACAGGAACAGTGCATTCTCGTGGCTCAGCGTACCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: GSPRTGRTELPGLAA*YRNSAFSWLSVPAL
Trigger: CAGGGCTGGTACGCTGAGCCACGAGAATGCACTGTTCCTGTATCATGCAGCCAGGCCAGGAAGCTCTGTTCTTCCAGTTCGGGGAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS GCA 90 bp ACACCTGCAGGCGGATCCTATTGGACAGGGCCGTGCCAAATTTGTTaGGGGCGAAGCACTGATATTCCCCCTCATATTCCTCCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: TPAGGSYWTGPCQIC*GRSTDIPPHIPPAA
Trigger: GGCGGCCGGAGGAATATGAGGGGGAATATCAGTGCTTCGCCCGCAACAAATTTGGCACGGCCCTGTCCAATAGGATCCGCCTGCAGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS GCA 90 bp GCCAGTAGGGAGCAGCCTTTACTCTCACCGAGATCGTGTGCCGGATaGTGCCCATCTTGTTGGAGGCCAGGCAGAAATACTCCCCGGAGT +
Preference number: 5 (lower is better)
Translates to: ASREQPLLSPRSCAG*CPSCWRPGRNTPRS
Trigger: ACTCCGGGGAGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGAGAGTAAAGGCTGCTCCCTACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS GCA 90 bp CCTGGGGTCTCCCCGAACTGGAAGAACAGAGCTTCCTGGCCTGGCTaGATGATACAGGAACAGTGCATTCTCGTGGCTCAGCGTACCAGC +
Preference number: 5 (lower is better)
Translates to: PGVSPNWKNRASWPG*MIQEQCILVAQRTS
Trigger: GCTGGTACGCTGAGCCACGAGAATGCACTGTTCCTGTATCATGCAGCCAGGCCAGGAAGCTCTGTTCTTCCAGTTCGGGGAGACCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS GCA 90 bp AGCTGGTTGTGTGACTCACTCCTGGTTTCTGAGACCAGAGAGGGATaGAGAGCGGGCTGTCAGCCTTTCTCTGCTTCTGCCTGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: SWLCDSLLVSETREG*RAGCQPFSASAWPL
Trigger: GAGGGGCCAGGCAGAAGCAGAGAAAGGCTGACAGCCCGCTCTGCATCCCTCTCTGGTCTCAGAAACCAGGAGTGAGTCACACAACCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CCA 90 bp AGGAGGTCCATGCCACGAAGCACCATCTGGCTGCTCGCGGTGCCCTaGGGATACATGAAGCTTGGTGTTCTTTCTGCAACTCCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: RRSMPRSTIWLLAVP*GYMKLGVLSATPRV
Trigger: CACCCGAGGAGTTGCAGAAAGAACACCAAGCTTCATGTATCCCCAGGGCACCGCGAGCAGCCAGATGGTGCTTCGTGGCATGGACCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000504149.1
ENST00000512826.5
CDS CCA 90 bp GAGGCGATGCATTCCAGCAGGAGGTCCATGCCACGAAGCACCATCTaGCTGCTCGCGGTGCCCTGGGGATACATGAAGCTTGGTGTTCTT +
Preference number: 5 (lower is better)
Translates to: EAMHSSRRSMPRSTI*LLAVPWGYMKLGVL
Trigger: AAGAACACCAAGCTTCATGTATCCCCAGGGCACCGCGAGCAGCCAGATGGTGCTTCGTGGCATGGACCTCCTGCTGGAATGCATCGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504149.1
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 90 bp TGCTCGTTGGAGGTGTTGCACTGGTACACAGCCCTGCTGCTGATCTaGGTGTCCCGGAAGATGATGGTGTCTCCGGCCACCTCACGGTTT +
Preference number: 5 (lower is better)
Translates to: CSLEVLHWYTALLLI*VSRKMMVSPATSRF
Trigger: AAACCGTGAGGTGGCCGGAGACACCATCATCTTCCGGGACACCCAGATCAGCAGCAGGGCTGTGTACCAGTGCAACACCTCCAACGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 90 bp AGTGGTATTGGCAGTTACACTGTTGTCCTGCTGAGCGCCCACCTCTaGAACTCTCTCATGTGGGTGCTGCTTCTGCCCAGGCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SGIGSYTVVLLSAHL*NSLMWVLLLPRPLL
Trigger: GAGGAGGGGCCTGGGCAGAAGCAGCACCCACATGAGAGAGTTCCAGAGGTGGGCGCTCAGCAGGACAACAGTGTAACTGCCAATACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS CCA 90 bp AGGAGGTCCATGCCACGAAGCACCATCTGGCTGCTCGCGGTGCCCTaGGGATACATGAAGCTTGGTGTTCTTTCTGCAACTCCTCGGGCA +
Preference number: 5 (lower is better)
Translates to: RRSMPRSTIWLLAVP*GYMKLGVLSATPRA
Trigger: TGCCCGAGGAGTTGCAGAAAGAACACCAAGCTTCATGTATCCCCAGGGCACCGCGAGCAGCCAGATGGTGCTTCGTGGCATGGACCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430393.7
ENST00000504476.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 90 bp ACGTGGCCAGGGCAGGAAACTCCCTCAGGCCAGCTGTACAGTATCTaGTCCTTTTCCCCTCCTCACGCTGTCTTCCTTCTGGAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: TWPGQETPSGQLYSI*SFSPPHAVFLLECS
Trigger: CGAGCACTCCAGAAGGAAGACAGCGTGAGGAGGGGAAAAGGACCAGATACTGTACAGCTGGCCTGAGGGAGTTTCCTGCCCTGGCCACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS CCA 90 bp CCTAAGTCCCCCTGCCCTAATAAACTTCCCGAGTGCCCAGGGGCTTaGGAGAGTGCAGAAGAGCACAGCAGGAGGGAGAGCTGGTTGTGT +
Preference number: 5 (lower is better)
Translates to: PKSPCPNKLPECPGA*ESAEEHSRRESWLC
Trigger: ACACAACCAGCTCTCCCTCCTGCTGTGCTCTTCTGCACTCTCCCAAGCCCCTGGGCACTCGGGAAGTTTATTAGGGCAGGGGGACTTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS-3UTR CAA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCGGGCAGGGTTCCCTTTaGCTTCACACTCAATCAGGA +
Preference number: 5 (lower is better)
Translates to: LNSSPANPRVAACMGPAAGQGSL*LHTQSG
Trigger: TCCTGATTGAGTGTGAAGCAAAAGGGAACCCTGCCC...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACTGCAGGCGGATCCTATaGGACAGGGCCGTGCCAAAT +
Preference number: 5 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHCRRIL*DRAVPN
Trigger: ATTTGGCACGGCCCTGTCCAATAGGATCCGCCTGCA...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGCAGGCGGATCCTATaGGACAGGGCCGTGCCAAAT +
Preference number: 5 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPCRRIL*DRAVPN
Trigger: ATTTGGCACGGCCCTGTCCAATAGGATCCGCCTGCA...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCGGGTCTAGGTTTTCCTaGGGCCACAGAGGAGATTTA +
Preference number: 5 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTGSRFS*GHRGDL
Trigger: TAAATCTCCTCTGTGGCCCAAGGAAAACCTAGACCC...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTTCCTGCAGCATCACGTaGGAGAAGTATAGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPSCSIT*EKYRSP
Trigger: CGGAGACCTATACTTCTCCAACGTGATGCTGCAGGA...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTATGCTGCCCATCTTGTaGGAGGCCAGGCAGAAATAC +
Preference number: 5 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPMLPIL*EARQKY
Trigger: GTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCAT...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACGTTAGGTGGTGCCGATaGCAAAGGTTCCCCATTCAC +
Preference number: 5 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNVRWCR*QRFPIH
Trigger: GTGAATGGGGAACCTTTGCAATCGGCACCACCTAAC...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCACTTGGTTTTCAGCTTaGCCCAGGATGTTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: LNSSPANPRVAACMGPAATWFSA*PRMLVA
Trigger: CGCCACCAACATCCTGGGCAAAGCTGAAAACCAAGT...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGATCCTGGTGGGGTCTTaGACCTCCAGGCGGACTTGG +
Preference number: 5 (lower is better)
Translates to: WTGWVWPSIYILGFTSEEILVGS*TSRRTW
Trigger: CCAAGTCCGCCTGGAGGTCAAAGACCCCACCAGGAT...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCCACGGGGTCCGTTCTTaGCACCGTGAACTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIHGVRS*HRELGL
Trigger: CAGACCAAGTTCACGGTGCAAAGAACGGACCCCGTG...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CAA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGCCATCCTCTTCCTaGGGGTCTTCAGGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEEPSSS*GSSGPR
Trigger: CCTTGGCCCTGAAGACCCCAAGGAAGAGGATGGCTC...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGGAGCCATCCTCTTCCTaGGGGTCTTCAGGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: WTGWVWPSIYILGFTSEEEPSSS*GSSGPR
Trigger: CCTTGGCCCTGAAGACCCCAAGGAAGAGGATGGCTC...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTCCCCATATCGTACCCTaGTTACTGAAGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTAPHIVP*LLKVVV
Trigger: CACCACCACCTTCAGTAACAAGGGTACGATATGGGG...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGGCTTGTGGGTGGCTaGGTGGCTACTGGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMGLVGG*VATGPH
Trigger: GTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CCAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTCCTTTTTGCCTATCTTaGCAAAAAGGATTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PAELSHGSSSPTLVAPGAPFCLS*QKGFSW
Trigger: CCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGG...AGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGCCTTTTTGCCTATCTTaGCAAAAAGGATTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PRADSVVERSGWLRDRARPFCLS*QKGFSW
Trigger: CCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGG...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CAGCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGCAGTGTCCTACAGAATaGGCTGAGAAGATGATATCT +
Preference number: 5 (lower is better)
Translates to: QLSSATAPALPHWWHPGLQCPTE*AEKMIS
Trigger: AGATATCATCTTCTCAGCCAATTCTGTAGGACACTG...CAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGTCCTGCCGGAACACTaGCATAGGCTGCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEVLPEH*HRLPCS
Trigger: AGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGAC...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGTCTTGGGGTAGTTGCTaGGGAGACCCAGCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: LWTGWVWPSIYILGFTSESWGSC*GDPAGR
Trigger: CCTGCCAGCTGGGTCTCCCAAGCAACTACCCCAAGA...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTTCTTGGGGTAGTTGCTaGGGAGACCCAGCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLSWGSC*GDPAGR
Trigger: CCTGCCAGCTGGGTCTCCCAAGCAACTACCCCAAGA...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGCTGTCCCGCCCAGCCTaGGTGACCAGATGGACCAAG +
Preference number: 5 (lower is better)
Translates to: LADPHIVPLLLKVVVASWLSRPA*VTRWTK
Trigger: CTTGGTCCATCTGGTCACCAAGGCTGGGCGGGACAG...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAACCTAAGCTAGATGCCTaGTACCTATTTCCATTCTCC +
Preference number: 5 (lower is better)
Translates to: AELSHGSSSPTLVAPGAEPKLDA*YLFPFS
Trigger: GGAGAATGGAAATAGGTACAAGGCATCTAGCTTAGG...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GGCCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAACCAGCTATGTGATCTaGAGCAAAAATCCCTTCACT +
Preference number: 5 (lower is better)
Translates to: GQGRTVWWNARGGCETGQTSYVI*SKNPFT
Trigger: AGTGAAGGGATTTTTGCTCAAGATCACATAGCTGGT...TTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CCAAGGGCGGACAGTGTGGTGGAACGCTCGGGGTGGCTGCGAGACCGGGCAAGGAAGTCTTTACATCTGTaGAACTCCAGCCCAGCAAAT +
Preference number: 5 (lower is better)
Translates to: PRADSVVERSGWLRDRARKSLHL*NSSPAN
Trigger: ATTTGCTGGGCTGGAGTTCAACAGATGTAAAGACTT...CCTTGCCCGGTCTCGCAGCCACCCCGAGCGTTCCACCACACTGTCCGCCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTGGTGGCGATGTCCGCTaGGTTGTTGGTGTAAGCTGC +
Preference number: 5 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPGGDVR*VVGVSC
Trigger: GCAGCTTACACCAACAACCAAGCGGACATCGCCACC...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367173.7
ENST00000404076.5
CDS TCA 90 bp CGGACTCGGAAACGCCTAGGGGCAAATCTTCTCCGGAGTAACCGATaGCGGACTCTGGCTCAGGGCCCTTCCCGAAGTCATTTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: RTRKRLGANLLRSNR*RTLAQGPSRSHFQP
Trigger: AGGCTGAAAATGACTTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATCGGTTACTCCGGAGAAGATTTGCCCCTAGGCGTTTCCGAGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468328.5
CDS TCA 90 bp GAGGGATGGCCACGGATTGGCCATGGAAGTATGATTCCCCATGGATaGGTCCAGGGTGGAGAAATGGGAGCCGGCAAGCTACCCATCAGG +
Preference number: 5 (lower is better)
Translates to: EGWPRIGHGSMIPHG*VQGGEMGAGKLPIR
Trigger: CCTGATGGGTAGCTTGCCGGCTCCCATTTCTCCACCCTGGACTCATCCATGGGGAATCATACTTCCATGGCCAATCCGTGGCCATCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503221.1
CDS GCA 90 bp CAGCCTTTCCCAGAGGGTGTGCCAGTATTGAGGCTTTTGCAGCCTTaGCTCCTCGAGAGGTCCCAGACTGCACATTCCCCTGATGCCAGT +
Preference number: 5 (lower is better)
Translates to: QPFPEGVPVLRLLQP*LLERSQTAHSPDAS
Trigger: ACTGGCATCAGGGGAATGTGCAGTCTGGGACCTCTCGAGGAGGCAAGGCTGCAAAAGCCTCAATACTGGCACACCCTCTGGGAAAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CCA 90 bp AGGAGGTCCATGCCACGAAGCACCATCTGGCTGCTCGCGGTGCCCTaGGGATACATGAAGCTTGGTGTTCTTTCTGCAACTCCTCGGGAT +
Preference number: 5 (lower is better)
Translates to: RRSMPRSTIWLLAVP*GYMKLGVLSATPRD
Trigger: ATCCCGAGGAGTTGCAGAAAGAACACCAAGCTTCATGTATCCCCAGGGCACCGCGAGCAGCCAGATGGTGCTTCGTGGCATGGACCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS CCA 90 bp TGTCATGTCAACAGTGTAAGGAAAGGGGCCAGGAAAAAGGCCGTGTaGCCAGGAGGAGGAGGCCACACAGAGAAGATGTGTGCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: CHVNSVRKGARKKAV*PGGGGHTEKMCASP
Trigger: GGGGCTGGCACACATCTTCTCTGTGTGGCCTCCTCCTCCTGGCCACACGGCCTTTTTCCTGGCCCCTTTCCTTACACTGTTGACATGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS CCA 90 bp ACGGATTGGCCATGGAAGTATGATTCCCCATGGATGAGTCCAGGGTaGAGAAATGGGAGCCGGCAAGCTACCCATCAGGGAGTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: TDWPWKYDSPWMSPG*RNGSRQATHQGVQA
Trigger: GGCCTGCACTCCCTGATGGGTAGCTTGCCGGCTCCCATTTCTCCACCCTGGACTCATCCATGGGGAATCATACTTCCATGGCCAATCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503221.1
CDS CCA 90 bp CAGAAGAGCACAGCAGGAGGGAGAGCTGGTTGTGTGACTCACTCCTaGTTTCTGAGACCAGAGAGGGATGCAGAGCGGGCTGTCAGCCTT +
Preference number: 5 (lower is better)
Translates to: QKSTAGGRAGCVTHS*FLRPERDAERAVSL
Trigger: AAGGCTGACAGCCCGCTCTGCATCCCTCTCTGGTCTCAGAAACCAGGAGTGAGTCACACAACCAGCTCTCCCTCCTGCTGTGCTCTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS-3UTR CAA 90 bp GGCAAGAAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTGGGTCCTTGGCGATGTaGAAGAATCTGCTGTTTCGT +
Preference number: 5 (lower is better)
Translates to: GKKRSPRLTRPLDCRHCPGSLAM*KNLLFR
Trigger: ACGAAACAGCAGATTCTTCAACATCGCCAAGGACCC...AGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTTCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTTGCAGGCGGATCCTATaGGACAGGGCCGTGCCAAAT +
Preference number: 5 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLCRRIL*DRAVPN
Trigger: ATTTGGCACGGCCCTGTCCAATAGGATCCGCCTGCA...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp TTCCAGGTTGATTGTCTCCAGGTTGGGCTGCCGGACTCGGAAACGCCTAGGGGCAGAGACACGTTTGTCTaGGGTGATGGGCTCCATGGA +
Preference number: 5 (lower is better)
Translates to: FQVDCLQVGLPDSETPRGRDTFV*GDGLHG
Trigger: TCCATGGAGCCCATCACCCAAGACAAACGTGTCTCT...GCCCCTAGGCGTTTCCGAGTCCGGCAGCCCAACCTGGAGACAATCAACCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CAA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGATGCTGCCCATCTTGTaGGAGGCCAGGCAGAAATAC +
Preference number: 5 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVMLPIL*EARQKY
Trigger: GTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCAT...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTCGGATGCTGCCCATCTaGTTGGAGGCCAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLRMLPI*LEARQK
Trigger: TTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCG...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp TATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACCCACTGGACAGTGGGTTaGGGGTTTCCATTGGCTCGA +
Preference number: 5 (lower is better)
Translates to: YPSRCWRKSRGGALQAHTHWTVG*GFPLAR
Trigger: TCGAGCCAATGGAAACCCCAAACCCACTGTCCAGTG...GGTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGTGCTCGTTGGAGGTGTaGCACTGGTACACAGCCCTG +
Preference number: 5 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVCSLEV*HWYTAL
Trigger: CAGGGCTGTGTACCAGTGCAACACCTCCAACGAGCA...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGTGCTCGTTGGAGGTGTaGCACTGGTACACAGCCCTG +
Preference number: 5 (lower is better)
Translates to: WTGWVWPSIYILGFTSEECSLEV*HWYTAL
Trigger: CAGGGCTGTGTACCAGTGCAACACCTCCAACGAGCA...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGACTTGGTTTTCAGCTTaGCCCAGGATGTTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: PVTNRKGERVPRPRADSVTWFSA*PRMLVA
Trigger: CGCCACCAACATCCTGGGCAAAGCTGAAAACCAAGT...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGATCCTGGTGGGGTCTTaGACCTCCAGGCGGACTTGG +
Preference number: 5 (lower is better)
Translates to: SLADPHIVPLLLKVVVASILVGS*TSRRTW
Trigger: CCAAGTCCGCCTGGAGGTCAAAGACCCCACCAGGAT...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGCCCCACACTGTGACGTaGTTCCAGGCCTCTCGAGTC +
Preference number: 5 (lower is better)
Translates to: SLADPHIVPLLLKVVVASPHTVT*FQASRV
Trigger: GACTCGAGAGGCCTGGAACAACGTCACAGTGTGGGG...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCATCTGCTTTCCTACTTaGGTCCCGTTAAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTICFPT*VPLKAT
Trigger: TGTGGCCTTTAACGGGACCAAAGTAGGAAAGCAGAT...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CAA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGACACGGGGTCCGTTCTTaGCACCGTGAACTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRHGVRS*HRELGL
Trigger: CAGACCAAGTTCACGGTGCAAAGAACGGACCCCGTG...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CAA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTCACGGGGTCCGTTCTTaGCACCGTGAACTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPHGVRS*HRELGL
Trigger: CAGACCAAGTTCACGGTGCAAAGAACGGACCCCGTG...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CAA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTCCGCCGCGACTCCTCTaGATGAAACAGACGATGAGC +
Preference number: 5 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLPPRLL*MKQTMS
Trigger: GCTCATCGTCTGTTTCATCAAGAGGAGTCGCGGCGG...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAATCTCGTACTGGGTACTaGCCGCCGCGACTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQSRTGY*PPRLLL
Trigger: CAAGAGGAGTCGCGGCGGCAAGTACCCAGTACGAGA...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGGAGCCATCCTCTTCCTaGGGGTCTTCAGGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: SLADPHIVPLLLKVVVASEPSSS*GSSGPR
Trigger: CCTTGGCCCTGAAGACCCCAAGGAAGAGGATGGCTC...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAGCCATCCTCTTCCTaGGGGTCTTCAGGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTEPSSS*GSSGPR
Trigger: CCTTGGCCCTGAAGACCCCAAGGAAGAGGATGGCTC...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACTCACTCTCCTGCTGCTaGATGGTGCCGTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHSLSCC*MVPSRD
Trigger: ATCTCTGGACGGCACCATCAAGCAGCAGGAGAGTGA...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCTCACTCTCCTGCTGCTaGATGGTGCCGTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: ERLKSEAVPMAADPFLGISLSCC*MVPSRD
Trigger: ATCTCTGGACGGCACCATCAAGCAGCAGGAGAGTGA...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCCTCCTTGTCCTTTTaGACCGTGTACTGGCCGATG +
Preference number: 5 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVSSLSF*TVYWPM
Trigger: CATCGGCCAGTACACGGTCAAAAAGGACAAGGAGGA...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGCTTGTGGGTGGCTaGGTGGCTACTGGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFGLVGG*VATGPH
Trigger: GTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTTCATTGGGAGGGGGCTaGTGGGTGGCTTGGTGGCTA +
Preference number: 5 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTSLGGG*WVAWWL
Trigger: TAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGA...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAATCATTGGGAGGGGGCTaGTGGGTGGCTTGGTGGCTA +
Preference number: 5 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQSLGGG*WVAWWL
Trigger: TAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGA...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACATCCTTTGGAAATGCATaGGCCCAGAGGTGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: SQGSISSRVAAWALATWTSFGNA*AQRWFE
Trigger: TTCAAACCACCTCTGGGCCAATGCATTTCCAAAGGA...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TTGAACTCCAGCCCAGCAAATCCCAGGGTGGCAGCTTGCATGGGCCCTGCTGCCCGAGAAAGGCATCCTTaGGAAATGCATTGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: LNSSPANPRVAACMGPAARERHP*EMHWPR
Trigger: TCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTCG...GGCAGCAGGGCCCATGCAAGCTGCCACCCTGGGATTTGCTGGGCTGGAGTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTCGAGAAAGGCATCCTTaGGAAATGCATTGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTARERHP*EMHWPR
Trigger: TCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTCG...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GCTGAGCTCAGCCACGGCTCCAGCTCTCCCACACTGGTGGCACCCGGGGCTGAACAGTGTCCTACAGAATaGGCTGAGAAGATGATATCT +
Preference number: 5 (lower is better)
Translates to: AELSHGSSSPTLVAPGAEQCPTE*AEKMIS
Trigger: AGATATCATCTTCTCAGCCAATTCTGTAGGACACTG...TTCAGCCCCGGGTGCCACCAGTGTGGGAGAGCTGGAGCCGTGGCTGAGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGTCCTGCCGGAACACTaGCATAGGCTGCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTVLPEH*HRLPCS
Trigger: AGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGAC...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACCCACGCCTCAGCGTTaGATCTCTCTGACCACCTGC +
Preference number: 5 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQPTPQR*ISLTTC
Trigger: GCAGGTGGTCAGAGAGATCAAACGCTGAGGCGTGGG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTCTGTCCCGCCCAGCCTaGGTGACCAGATGGACCAAG +
Preference number: 5 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGLSRPA*VTRWTK
Trigger: CTTGGTCCATCTGGTCACCAAGGCTGGGCGGGACAG...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGCTATGTGGGCTCAGTaGCACCTTGCAGGGCAAGCA +
Preference number: 5 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEAMWAQ*HLAGQA
Trigger: TGCTTGCCCTGCAAGGTGCAACTGAGCCCACATAGC...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGCCGCTGCCCGTGCCATaGCTTGGGCAAAGTTTCCCA +
Preference number: 5 (lower is better)
Translates to: SLADPHIVPLLLKVVVASPLPVP*LGQSFP
Trigger: TGGGAAACTTTGCCCAAGCAATGGCACGGGCAGCGG...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCTGTTTGTCTTTCATTTaGGGAGGCATGTGGGGGATG +
Preference number: 5 (lower is better)
Translates to: GGGLWVAWWLLVLTAWQTCLSFI*GGMWGM
Trigger: CATCCCCCACATGCCTCCCAAAATGAAAGACAAACA...GGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGACAGACTGATCTaGGTCTCAGAAACAATCCTG +
Preference number: 5 (lower is better)
Translates to: ASQGSISSRVAAWALATWTDRLI*VSETIL
Trigger: CAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGT...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGTGGTTGGTGAGGACCTaGAGGGTGAAAGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: PVTNRKGERVPRPRADSVWLVRT*RVKGFF
Trigger: GAAGAACCCTTTCACCCTCAAGGTCCTCACCAACCA...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CAA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTGGGGTGGTGAACTCCTaGGTCTCACTGCGAGGCCCA +
Preference number: 5 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSGVVNS*VSLRGP
Trigger: TGGGCCTCGCAGTGAGACCAAGGAGTTCACCACCCC...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404076.5
CDS TCA 90 bp GCTGCTCTCCCTCCAGTAGTAGGCAATCTTCTCCGGAGTAACCGATaGCGGACTCTGGCTCAGGGCCCTTCCCGAAGTCATTTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: AALPPVVGNLLRSNR*RTLAQGPSRSHFQP
Trigger: AGGCTGAAAATGACTTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATCGGTTACTCCGGAGAAGATTGCCTACTACTGGAGGGAGAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS TCA 90 bp TGCCACGAAGCACCATCTGGCTGCTCGCGGTGCCCTGGGGATACATaGAGCTTGGTGTTCTTTCTGCAACTCCTCGGGCACTGTACATGT +
Preference number: 5 (lower is better)
Translates to: CHEAPSGCSRCPGDT*SLVFFLQLLGHCTC
Trigger: ACATGTACAGTGCCCGAGGAGTTGCAGAAAGAACACCAAGCTTCATGTATCCCCAGGGCACCGCGAGCAGCCAGATGGTGCTTCGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430393.7
ENST00000504476.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS GCA 90 bp AGTAGGGAGCAGCCTTTACTCTCACCGAGATCGTGTGCCGGATGCTaGCCATCTTGTTGGAGGCCAGGCAGAAATACTCCCCGGAGTCTT +
Preference number: 5 (lower is better)
Translates to: SREQPLLSPRSCAGC*PSCWRPGRNTPRSL
Trigger: AAGACTCCGGGGAGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGAGAGTAAAGGCTGCTCCCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS GCA 90 bp GTGGAGCAGGGTGGGAGAAAGGAGGCCTTGGAAGGTAAAGGGACTTaGCCAGGAGACAAAGGTGGTGCCCACTGGGTCCTACAATTCTAC +
Preference number: 5 (lower is better)
Translates to: VEQGGRKEALEGKGT*PGDKGGAHWVLQFY
Trigger: GTAGAATTGTAGGACCCAGTGGGCACCACCTTTGTCTCCTGGGCAAGTCCCTTTACCTTCCAAGGCCTCCTTTCTCCCACCCTGCTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS CCA 90 bp AAGCACCATCTGGCTGCTCGCGGTGCCCTGGGGATACATGAAGCTTaGTGTTCTTTCTGCAACTCCTCGGGCACTGTACATGTCAGGGTG +
Preference number: 5 (lower is better)
Translates to: KHHLAARGALGIHEA*CSFCNSSGTVHVRV
Trigger: CACCCTGACATGTACAGTGCCCGAGGAGTTGCAGAAAGAACACCAAGCTTCATGTATCCCCAGGGCACCGCGAGCAGCCAGATGGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430393.7
ENST00000504476.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 90 bp GGCAGGTGCAGCTCTGGTGGGGCTGAAATGCTGCCAGATGACGCCTaGACCCAGGTGATGAACTCATTTGCTCTTTGTGAAGCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: GRCSSGGAEMLPDDA*TQVMNSFALCEAGL
Trigger: CAAGCCAGCTTCACAAAGAGCAAATGAGTTCATCACCTGGGTCCAGGCGTCATCTGGCAGCATTTCAGCCCCACCAGAGCTGCACCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS-3UTR CAA 90 bp AAGAGATCACCACGCCTGACCCGGCCACTTGACTGCAGGCACTGCCCTCGGAACCTCCAGCGTCCCAAATaGCACATAAGTCAATCAACC +
Preference number: 5 (lower is better)
Translates to: KRSPRLTRPLDCRHCPRNLQRPK*HISQST
Trigger: GGTTGATTGACTTATGTGCAATTTGGGACGCTGGAG...GTTCCGAGGGCAGTGCCTGCAGTCAAGTGGCCGGGTCAGGCGTGGTGATCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTCCAGCACTCGGGGTCTaGTCACCTCGAGCCGCTTTA +
Preference number: 5 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGPALGV*SPRAAL
Trigger: TAAAGCGGCTCGAGGTGACAAGACCCCGAGTGCTGG...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGTCCTTCGCTGACTGCTaGGTGATGGTTGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: STACSETGSSLTLTSRGKSFADC*VMVGGC
Trigger: GCAGCCGCCAACCATCACCAAGCAGTCAGCGAAGGA...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTCCTTCGCTGACTGCTaGGTGATGGTTGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTSFADC*VMVGGC
Trigger: GCAGCCGCCAACCATCACCAAGCAGTCAGCGAAGGA...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp GTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGGGAGACCCAGCTGCGGGTGGTGAGGACCTaGAGGGTGAAAGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: VLASLLVCLGVVAWETQLRVVRT*RVKGFF
Trigger: GAAGAACCCTTTCACCCTCAAGGTCCTCACCACCCG...CAGCTGGGTCTCCCAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCCGGGTGGTGAGGACCTaGAGGGTGAAAGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRRVVRT*RVKGFF
Trigger: GAAGAACCCTTTCACCCTCAAGGTCCTCACCACCCG...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403080.5
CDS-3UTR CAA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTCGGATGCTGCCCATCTaGTTGGAGGCCAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVRMLPI*LEARQK
Trigger: TTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCG...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTCACTGGACAGTGGGTTaGGGGTTTCCATTGGCTCGA +
Preference number: 5 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLHWTVG*GFPLAR
Trigger: TCGAGCCAATGGAAACCCCAAACCCACTGTCCAGTG...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp CTTGCTGTCTCTTCTGAGACACCCACAGGTTCTTCAGCAAGCTGCTCTCCCTCCTGCTCGTTGGAGGTGTaGCACTGGTACACAGCCCTG +
Preference number: 5 (lower is better)
Translates to: LAVSSETPTGSSASCSPSCSLEV*HWYTAL
Trigger: CAGGGCTGTGTACCAGTGCAACACCTCCAACGAGCA...GGAGGGAGAGCAGCTTGCTGAAGAACCTGTGGGTGTCTCAGAAGAGACAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CAA 90 bp GGGTCATTGGGAGGGGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTATCCAGGTTGCTTCCTaGCCCATTCTTAAACCATCG +
Preference number: 5 (lower is better)
Translates to: GSLGGGLWVAWWLLVLTAIQVAS*PILKPS
Trigger: CGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGAT...AGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGGGTGGCGATGTCCGCTaGGTTGTTGGTGTAAGCTGT +
Preference number: 5 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVGGDVR*VVGVSC
Trigger: ACAGCTTACACCAACAACCAAGCGGACATCGCCACC...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACCGCCGCGACTCCTCTaGATGAAACAGACGATGAGC +
Preference number: 5 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQPPRLL*MKQTMS
Trigger: GCTCATCGTCTGTTTCATCAAGAGGAGTCGCGGCGG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TCGGACTTTAACTTCAGTGGGCGCAGCCCTGGGATAATCTTCTCCGGAGTAACCTCTCGTACTGGGTACTaGCCGCCGCGACTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: SDFNFSGRSPGIIFSGVTSRTGY*PPRLLL
Trigger: CAAGAGGAGTCGCGGCGGCAAGTACCCAGTACGAGA...GGTTACTCCGGAGAAGATTATCCCAGGGCTGCGCCCACTGAAGTTAAAGTCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CAA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGCCTCTGAGCTTTCGTaGCCCTCTGTTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPASELS*PSVSSL
Trigger: CAAGGAGGAAACAGAGGGCAACGAAAGCTCAGAGGC...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTA +
Preference number: 5 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVTGPHS*ADPHIV
Trigger: TACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGT...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTA +
Preference number: 5 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLTGPHS*ADPHIV
Trigger: TACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGT...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGTCATTGGGAGGGGGCTaGTGGGTGGCTTGGTGGCTA +
Preference number: 5 (lower is better)
Translates to: TKSIESSLGGGITTLSTVSLGGG*WVAWWL
Trigger: TAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGA...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTCAGACCTGCTCAGTCTaGGGGCAAGTCCCCATCCAC +
Preference number: 5 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGQTCSV*GQVPIH
Trigger: GTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTG...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGCAGACCTGCTCAGTCTaGGGGCAAGTCCCCATCCAC +
Preference number: 5 (lower is better)
Translates to: TKSIESSLGGGITTLSTVQTCSV*GQVPIH
Trigger: GTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTG...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGTCCTGCCGGAACACTaGCATAGGCTGCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: DEGSTFGLRTAGLRVSPFVLPEH*HRLPCS
Trigger: AGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGAC...AAATGGAGACACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTTACCCTGTCCCCTaGCACTGTGATAAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLVYPVP*HCDKLP
Trigger: GGGCAGCTTATCACAGTGCAAGGGGACAGGGTAAAC...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGTTTACCCTGTCCCCTaGCACTGTGATAAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEVYPVP*HCDKLP
Trigger: GGGCAGCTTATCACAGTGCAAGGGGACAGGGTAAAC...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCTCTTCAGCCTCAGATTaGCTTCTGCTCAGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: ERLKSEAVPMAADPFLGISSASD*LLLRGV
Trigger: CACCCCTCTGAGCAGAAGCAAATCTGAGGCTGAAGA...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGACAGGTTAAGGAGCTaGCCCCAAGAGGCAGAGCAA +
Preference number: 5 (lower is better)
Translates to: LWTGWVWPSIYILGFTSEDRLRS*PQEAEQ
Trigger: TTGCTCTGCCTCTTGGGGCAAGCTCCTTAACCTGTC...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTCTGGATCGCTATCCCTaGGAAGCACTGCTTGGCAAC +
Preference number: 5 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPLDRYP*EALLGN
Trigger: GTTGCCAAGCAGTGCTTCCAAGGGATAGCGATCCAG...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGCCGCTGCCCGTGCCATaGCTTGGGCAAAGTTTCCCA +
Preference number: 5 (lower is better)
Translates to: TKSIESSLGGGITTLSTVPLPVP*LGQSFP
Trigger: TGGGAAACTTTGCCCAAGCAATGGCACGGGCAGCGG...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGGCCACAAAGTCTGGCTaGGACTCACATGGGGTAGCC +
Preference number: 5 (lower is better)
Translates to: LADPHIVPLLLKVVVASWATKSG*DSHGVA
Trigger: GGCTACCCCATGTGAGTCCAAGCCAGACTTTGTGGC...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTCTGTTTGGTGGACGCTaGTGGCTCTCCTGGATGGTT +
Preference number: 5 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLLFGGR*WLSWMV
Trigger: AACCATCCAGGAGAGCCACAAGCGTCCACCAAACAG...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGCTGTTTGGTGGACGCTaGTGGCTCTCCTGGATGGTT +
Preference number: 5 (lower is better)
Translates to: LWTGWVWPSIYILGFTSELFGGR*WLSWMV
Trigger: AACCATCCAGGAGAGCCACAAGCGTCCACCAAACAG...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CTGCCCTGGTCCCGCTCTGCCACCCCAAAGATGGTCAGGGAGTCGTCTTCCTTCATCCAGGTTGCTTCCTaGCCCATTCTTAAACCTCAC +
Preference number: 5 (lower is better)
Translates to: LPWSRSATPKMVRESSSFIQVAS*PILKPH
Trigger: GTGAGGTTTAAGAATGGGCAAGGAAGCAACCTGGAT...GAAGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAGAGCGGGACCAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS GCA 90 bp CTACTATGGGCCAGATGGGAAGGAGAAGATGAGACAGGTGACCCCTaGTGTGGAAGGCCTGATCTCCTGGAACTTACCATCGCAGTGTGG +
Preference number: 5 (lower is better)
Translates to: LLWARWEGEDETGDP*CGRPDLLELTIAVW
Trigger: CCACACTGCGATGGTAAGTTCCAGGAGATCAGGCCTTCCACAGCAGGGGTCACCTGTCTCATCTTCTCCTTCCCATCTGGCCCATAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514644.5
CDS CCA 90 bp CCTTTACTCTCACCGAGATCGTGTGCCGGATGCTGCCCATCTTGTTaGAGGCCAGGCAGAAATACTCCCCGGAGTCTTCCTCAGAGACAT +
Preference number: 5 (lower is better)
Translates to: PLLSPRSCAGCCPSC*RPGRNTPRSLPQRH
Trigger: ATGTCTCTGAGGAAGACTCCGGGGAGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGAGAGTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 90 bp GTGGTGCCGATTGCAAAGGTTCCCCATTCACCATCCACTGGACAGTaGGTTTGGGGTTTCCATTGGCTCGACACACCAGTCTCCCATCCT +
Preference number: 5 (lower is better)
Translates to: VVPIAKVPHSPSTGQ*VWGFHWLDTPVSHP
Trigger: AGGATGGGAGACTGGTGTGTCGAGCCAATGGAAACCCCAAACCCACTGTCCAGTGGATGGTGAATGGGGAACCTTTGCAATCGGCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 90 bp GGGTTAGGTGGTGCCGATTGCAAAGGTTCCCCATTCACCATCCACTaGACAGTGGGTTTGGGGTTTCCATTGGCTCGACACACCAGTCTC +
Preference number: 5 (lower is better)
Translates to: GLGGADCKGSPFTIH*TVGLGFPLARHTSL
Trigger: GAGACTGGTGTGTCGAGCCAATGGAAACCCCAAACCCACTGTCCAGTGGATGGTGAATGGGGAACCTTTGCAATCGGCACCACCTAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 90 bp GAGAAGATGAGACAGGTGACCCCTGCTGTGGAAGGCCTGATCTCCTaGAACTTACCATCGCAGTGTGGGGATGGGAGACCCAAAGAAAGG +
Preference number: 5 (lower is better)
Translates to: EKMRQVTPAVEGLIS*NLPSQCGDGRPKER
Trigger: CCTTTCTTTGGGTCTCCCATCCCCACACTGCGATGGTAAGTTCCAGGAGATCAGGCCTTCCACAGCAGGGGTCACCTGTCTCATCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514644.5
CDS-3UTR CAA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCGGGTCCTTGGCGATGTaGAAGAATCTGCTGTTTCGT +
Preference number: 5 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIGSLAM*KNLLFR
Trigger: ACGAAACAGCAGATTCTTCAACATCGCCAAGGACCC...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp AGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTGCTCTTGCAGGCGGATCCTATaGGACAGGGCCGTGCCAAAT +
Preference number: 5 (lower is better)
Translates to: RLRKQDCFSSHTVVLDCSCRRIL*DRAVPN
Trigger: ATTTGGCACGGCCCTGTCCAATAGGATCCGCCTGCA...AGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGCAGGCGGATCCTATaGGACAGGGCCGTGCCAAAT +
Preference number: 5 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTCRRIL*DRAVPN
Trigger: ATTTGGCACGGCCCTGTCCAATAGGATCCGCCTGCA...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACGGGTCTAGGTTTTCCTaGGGCCACAGAGGAGATTTA +
Preference number: 5 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHGSRFS*GHRGDL
Trigger: TAAATCTCCTCTGTGGCCCAAGGAAAACCTAGACCC...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGATCCTGCAGCATCACGTaGGAGAAGTATAGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRSCSIT*EKYRSP
Trigger: CGGAGACCTATACTTCTCCAACGTGATGCTGCAGGA...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTATGCTGCCCATCTTGTaGGAGGCCAGGCAGAAATAC +
Preference number: 5 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPMLPIL*EARQKY
Trigger: GTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCAT...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTATGCTGCCCATCTTGTaGGAGGCCAGGCAGAAATAC +
Preference number: 5 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLMLPIL*EARQKY
Trigger: GTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCAT...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCCGGATGCTGCCCATCTaGTTGGAGGCCAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTRMLPI*LEARQK
Trigger: TTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCG...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCCACTGGACAGTGGGTTaGGGGTTTCCATTGGCTCGA +
Preference number: 5 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRHWTVG*GFPLAR
Trigger: TCGAGCCAATGGAAACCCCAAACCCACTGTCCAGTG...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGTTAGGTGGTGCCGATaGCAAAGGTTCCCCATTCAC +
Preference number: 5 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPVRWCR*QRFPIH
Trigger: GTGAATGGGGAACCTTTGCAATCGGCACCACCTAAC...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp GGTGGGGAGGATGAAGGCAGCACCTTCGGTCTGAGAACTGCAGGTCTGCGAGTGATCCAGGTTGCTTCCTaGCCCATTCTTAAACCATCG +
Preference number: 5 (lower is better)
Translates to: GGEDEGSTFGLRTAGLRVIQVAS*PILKPS
Trigger: CGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGAT...CACTCGCAGACCTGCAGTTCTCAGACCGAAGGTGCTGCCTTCATCCTCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGGACCTCCAGGCGGACTaGGTTTTCAGCTTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: STACSETGSSLTLTSRGKDLQAD*VFSFAQ
Trigger: CTGGGCAAAGCTGAAAACCAAGTCCGCCTGGAGGTC...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGACGCTGCCGGGGTACTaGGAATGGTCATGCCAGACC +
Preference number: 5 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLTLPGY*EWSCQT
Trigger: GGTCTGGCATGACCATTCCAAGTACCCCGGCAGCGT...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAACGCTGCCGGGGTACTaGGAATGGTCATGCCAGACC +
Preference number: 5 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPTLPGY*EWSCQT
Trigger: GGTCTGGCATGACCATTCCAAGTACCCCGGCAGCGT...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGGTTCCGGGCCCGAAATaGTGCTTCCAGGTGATGTTG +
Preference number: 5 (lower is better)
Translates to: SLADPHIVPLLLKVVVASVPGPK*CFQVML
Trigger: CAACATCACCTGGAAGCACAATTTCGGGCCCGGAAC...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGTCTCGTACTGGGTACTaGCCGCCGCGACTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWSRTGY*PPRLLL
Trigger: CAAGAGGAGTCGCGGCGGCAAGTACCCAGTACGAGA...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTCACTCTCCTGCTGCTaGATGGTGCCGTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: SLADPHIVPLLLKVVVASSLSCC*MVPSRD
Trigger: ATCTCTGGACGGCACCATCAAGCAGCAGGAGAGTGA...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGTCCTCCTTGTCCTTTTaGACCGTGTACTGGCCGATG +
Preference number: 5 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVSSLSF*TVYWPM
Trigger: CATCGGCCAGTACACGGTCAAAAAGGACAAGGAGGA...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GAGAGGCTCAAATCGGAGGCTGTGCCCATGGCAGCTGATCCATTCCTGGGGATCCCCTCTGTTTCCTCCTaGTCCTTTTTGACCGTGTAC +
Preference number: 5 (lower is better)
Translates to: ERLKSEAVPMAADPFLGIPSVSS*SFLTVY
Trigger: GTACACGGTCAAAAAGGACAAGGAGGAAACAGAGGG...GATCCCCAGGAATGGATCAGCTGCCATGGGCACAGCCTCCGATTTGAGCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAAACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTA +
Preference number: 5 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQTGPHS*ADPHIV
Trigger: TACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGT...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTA +
Preference number: 5 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTTGPHS*ADPHIV
Trigger: TACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGT...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp TCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACACAGTGTCCTACAGAATaGGCTGAGAAGATGATATCT +
Preference number: 5 (lower is better)
Translates to: SQGSISSRVAAWALATWTQCPTE*AEKMIS
Trigger: AGATATCATCTTCTCAGCCAATTCTGTAGGACACTG...TGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGCAGACCTGCTCAGTCTaGGGGCAAGTCCCCATCCAC +
Preference number: 5 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLQTCSV*GQVPIH
Trigger: GTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTG...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTCAGACCTGCTCAGTCTaGGGGCAAGTCCCCATCCAC +
Preference number: 5 (lower is better)
Translates to: QGPLICIHPNERADLLSLQTCSV*GQVPIH
Trigger: GTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTG...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTTCTTCAGCCTCAGATTaGCTTCTGCTCAGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLSSASD*LLLRGV
Trigger: CACCCCTCTGAGCAGAAGCAAATCTGAGGCTGAAGA...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGCTGGATCGCTATCCCTaGGAAGCACTGCTTGGCAAC +
Preference number: 5 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMLDRYP*EALLGN
Trigger: GTTGCCAAGCAGTGCTTCCAAGGGATAGCGATCCAG...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACCATCACCTCTCCCATaGACCACAACCATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQPSPLP*TTTISS
Trigger: GCTGGAGATGGTTGTGGTCAATGGGAGAGGTGATGG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404076.5
CDS TCA 90 bp TGTTATCACGGGGGTCCACGATGTGATCCTTCGCTGACTGCTTGGTaGTGGTTGGCGGCTGCGTCAGCTCATTCTGAATGCTTGGATCCA +
Preference number: 5 (lower is better)
Translates to: CYHGGPRCDPSLTAW*WLAAASAHSECLDP
Trigger: TGGATCCAAGCATTCAGAATGAGCTGACGCAGCCGCCAACCATCACCAAGCAGTCAGCGAAGGATCACATCGTGGACCCCCGTGATAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000403080.5
ENST00000504476.5
ENST00000505079.5
CDS TCA 90 bp TCCTGCAGCATCACGTTGGAGAAGTATAGGTCTCCGTTATGGCCCTaGGAGACACGTTTGTCTTGGGTGATGGGCTCCATGGAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: SCSITLEKYRSPLWP*ETRLSWVMGSMELL
Trigger: GAGCAGCTCCATGGAGCCCATCACCCAAGACAAACGTGTCTCTCAGGGCCATAACGGAGACCTATACTTCTCCAACGTGATGCTGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS TCA 90 bp AGGCAAGAGGATTGTATTTCCAATCCGGGCAAGGGCTGGCTTCACTaGGAGAACACATTCCCCGGATCTGGCTGGAGACCTGGAGACTCA +
Preference number: 5 (lower is better)
Translates to: RQEDCISNPGKGWLH*ENTFPGSGWRPGDS
Trigger: TGAGTCTCCAGGTCTCCAGCCAGATCCGGGGAATGTGTTCTCTCAGTGAAGCCAGCCCTTGCCCGGATTGGAAATACAATCCTCTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS TCA 90 bp CAACTGTGGCAGAAGAGTTCTGGGTGCTTCCTGGCTGCCTCACGCTaGTTTTATAGCTGGCCTGTGAGCTCAGGAAGCTACAGACCTTCC +
Preference number: 5 (lower is better)
Translates to: QLWQKSSGCFLAASR*FYSWPVSSGSYRPS
Trigger: GGAAGGTCTGTAGCTTCCTGAGCTCACAGGCCAGCTATAAAATCAGCGTGAGGCAGCCAGGAAGCACCCAGAACTCTTCTGCCACAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS TCA 90 bp GATAAGGATTCTCATCACTGGGTCCAGGCAGCAGGCCCAGGCTTCTaGGCTGAGAATGTTGGGTTCAGGGGTAAGGAGACAGAAAGCCAG +
Preference number: 5 (lower is better)
Translates to: DKDSHHWVQAAGPGF*AENVGFRGKETESQ
Trigger: CTGGCTTTCTGTCTCCTTACCCCTGAACCCAACATTCTCAGCTCAGAAGCCTGGGCCTGCTGCCTGGACCCAGTGATGAGAATCCTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495396.5
CDS GCA 90 bp GAAGCTGGCTTGGCAAATGGCTGTTTCCTAACTCCTCCTCCTCTCTaGAGCCTGACAACGCATCCAATTCAGGCTGCAAGGAAGGACCAC +
Preference number: 5 (lower is better)
Translates to: EAGLANGCFLTPPPL*SLTTHPIQAARKDH
Trigger: GTGGTCCTTCCTTGCAGCCTGAATTGGATGCGTTGTCAGGCTGCAGAGAGGAGGAGGAGTTAGGAAACAGCCATTTGCCAAGCCAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CCA 90 bp ATGACTTGTCAGCTTCCAGAGTGCCCACTCACATCACCTCTTCTCTaGAGTCTTCCCGTGAAGACTGAATCCCCTTCTCTGCCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: MTCQLPECPLTSPLL*SLPVKTESPSLPSH
Trigger: GTGGCTGGGCAGAGAAGGGGATTCAGTCTTCACGGGAAGACTCCAGAGAAGAGGTGATGTGAGTGGGCACTCTGGAAGCTGACAAGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS-3UTR CAA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGGGCAGGGTTCCCTTTaGCTTCACACTCAATCAGGA +
Preference number: 5 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTGQGSL*LHTQSG
Trigger: TCCTGATTGAGTGTGAAGCAAAAGGGAACCCTGCCC...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCGGGCAGGGTTCCCTTTaGCTTCACACTCAATCAGGA +
Preference number: 5 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRGQGSL*LHTQSG
Trigger: TCCTGATTGAGTGTGAAGCAAAAGGGAACCCTGCCC...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTGACACCCGGGGGTCCTaGGCGATGTTGAAGAATCTG +
Preference number: 5 (lower is better)
Translates to: QGPLICIHPNERADLLSLDTRGS*AMLKNL
Trigger: CAGATTCTTCAACATCGCCAAGGACCCCCGGGTGTC...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGGACACCCGGGGGTCCTaGGCGATGTTGAAGAATCTG +
Preference number: 5 (lower is better)
Translates to: TACSETGSSLTLTSRGKKDTRGS*AMLKNL
Trigger: CAGATTCTTCAACATCGCCAAGGACCCCCGGGTGTC...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGTGCAGGCGGATCCTATaGGACAGGGCCGTGCCAAAT +
Preference number: 5 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQCRRIL*DRAVPN
Trigger: ATTTGGCACGGCCCTGTCCAATAGGATCCGCCTGCA...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGGGGTCTAGGTTTTCCTaGGGCCACAGAGGAGATTTA +
Preference number: 5 (lower is better)
Translates to: WTGWVWPSIYILGFTSEEGSRFS*GHRGDL
Trigger: TAAATCTCCTCTGTGGCCCAAGGAAAACCTAGACCC...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAAAGAGACACGTTTGTCTaGGGTGATGGGCTCCATGGA +
Preference number: 5 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQRDTFV*GDGLHG
Trigger: TCCATGGAGCCCATCACCCAAGACAAACGTGTCTCT...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTCCTGCAGCATCACGTaGGAGAAGTATAGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: SLADPHIVPLLLKVVVASSCSIT*EKYRSP
Trigger: CGGAGACCTATACTTCTCCAACGTGATGCTGCAGGA...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp CTGCCCTGGTCCCGCTCTGCCACCCCAAAGATGGTCAGGGAGTCGTCTTCCTTCTTAAAGTTCTCAAACTaGGCCTTATCAGATGGGAGG +
Preference number: 5 (lower is better)
Translates to: LPWSRSATPKMVRESSSFLKFSN*ALSDGR
Trigger: CCTCCCATCTGATAAGGCCAAGTTTGAGAACTTTAA...GAAGGAAGACGACTCCCTGACCATCTTTGGGGTGGCAGAGCGGGACCAGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CAA 90 bp CTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTATGCTGCCCATCTTGTaGGAGGCCAGGCAGAAATAC +
Preference number: 5 (lower is better)
Translates to: LGGYWSSQLGRPPYRTLVMLPIL*EARQKY
Trigger: GTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCAT...AACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp TCTCCCATTGACCACAACCATCTCCAGCTTGTAGTTACTGTAGGGGAAGAGGCGCGGATGCTGCCCATCTaGTTGGAGGCCAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: SPIDHNHLQLVVTVGEEARMLPI*LEARQK
Trigger: TTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCG...CGCCTCTTCCCCTACAGTAACTACAAGCTGGAGATGGTTGTGGTCAATGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CAA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTGGTTTGGGGTTTCCATaGGCTCGACACACCAGTCTC +
Preference number: 5 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSGLGFP*ARHTSL
Trigger: GAGACTGGTGTGTCGAGCCAATGGAAACCCCAAACC...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCCACTGGACAGTGGGTTaGGGGTTTCCATTGGCTCGA +
Preference number: 5 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTHWTVG*GFPLAR
Trigger: TCGAGCCAATGGAAACCCCAAACCCACTGTCCAGTG...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGTTAGGTGGTGCCGATaGCAAAGGTTCCCCATTCAC +
Preference number: 5 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTVRWCR*QRFPIH
Trigger: GTGAATGGGGAACCTTTGCAATCGGCACCACCTAAC...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGTGCTCGTTGGAGGTGTaGCACTGGTACACAGCCCTG +
Preference number: 5 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWCSLEV*HWYTAL
Trigger: CAGGGCTGTGTACCAGTGCAACACCTCCAACGAGCA...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGTGCTCGTTGGAGGTGTaGCACTGGTACACAGCCCTG +
Preference number: 5 (lower is better)
Translates to: TACSETGSSLTLTSRGKKCSLEV*HWYTAL
Trigger: CAGGGCTGTGTACCAGTGCAACACCTCCAACGAGCA...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGTGCTCGTTGGAGGTGTaGCACTGGTACACAGCCCTG +
Preference number: 5 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQCSLEV*HWYTAL
Trigger: CAGGGCTGTGTACCAGTGCAACACCTCCAACGAGCA...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGACTTGGTTTTCAGCTTaGCCCAGGATGTTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMTWFSA*PRMLVA
Trigger: CGCCACCAACATCCTGGGCAAAGCTGAAAACCAAGT...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCACTTGGTTTTCAGCTTaGCCCAGGATGTTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRTWFSA*PRMLVA
Trigger: CGCCACCAACATCCTGGGCAAAGCTGAAAACCAAGT...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTGACCTCCAGGCGGACTaGGTTTTCAGCTTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTDLQAD*VFSFAQ
Trigger: CTGGGCAAAGCTGAAAACCAAGTCCGCCTGGAGGTC...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGGACCTCCAGGCGGACTaGGTTTTCAGCTTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: TACSETGSSLTLTSRGKKDLQAD*VFSFAQ
Trigger: CTGGGCAAAGCTGAAAACCAAGTCCGCCTGGAGGTC...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGGACCTCCAGGCGGACTaGGTTTTCAGCTTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWDLQAD*VFSFAQ
Trigger: CTGGGCAAAGCTGAAAACCAAGTCCGCCTGGAGGTC...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp AGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGACAGGTGTTAAAGGCCACATATTaGAGAGTGTATCCAATCATG +
Preference number: 5 (lower is better)
Translates to: RVPSPRGWQHGPWPRGQVLKATY*RVYPIM
Trigger: CATGATTGGATACACTCTCAAATATGTGGCCTTTAA...CACCTGTCCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CAA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTCACGGGGTCCGTTCTTaGCACCGTGAACTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTHGVRS*HRELGL
Trigger: CAGACCAAGTTCACGGTGCAAAGAACGGACCCCGTG...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CAA 90 bp TCTCCCATTGACCACAACCATCTCCAGCTTGTAGTTACTGTAGGGGAAGAGGCGCACGGGGTCCGTTCTTaGCACCGTGAACTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: SPIDHNHLQLVVTVGEEAHGVRS*HRELGL
Trigger: CAGACCAAGTTCACGGTGCAAAGAACGGACCCCGTG...CGCCTCTTCCCCTACAGTAACTACAAGCTGGAGATGGTTGTGGTCAATGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CAA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGTTGGCCCATTTACTGTaGGGGAGCACCGTGACGTTC +
Preference number: 5 (lower is better)
Translates to: TKSIESSLGGGITTLSTVLAHLL*GSTVTF
Trigger: GAACGTCACGGTGCTCCCCAACAGTAAATGGGCCAA...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp AGGCTCAGGAAGCAGGACTGTTTCTCAAGCCACACCGTGGTTCTTGACTGCTCTGGTGGCGATGTCCGCTaGGTTGTTGGTGTAAGCTGT +
Preference number: 5 (lower is better)
Translates to: RLRKQDCFSSHTVVLDCSGGDVR*VVGVSC
Trigger: ACAGCTTACACCAACAACCAAGCGGACATCGCCACC...AGAGCAGTCAAGAACCACGGTGTGGCTTGAGAAACAGTCCTGCTTCCTGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTCCGCCGCGACTCCTCTaGATGAAACAGACGATGAGC +
Preference number: 5 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTPPRLL*MKQTMS
Trigger: GCTCATCGTCTGTTTCATCAAGAGGAGTCGCGGCGG...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTTCACTCTCCTGCTGCTaGATGGTGCCGTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGSLSCC*MVPSRD
Trigger: ATCTCTGGACGGCACCATCAAGCAGCAGGAGAGTGA...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp TTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGTGGCCCCATATCGTACCCTaGTTACTGAAGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LADPHIVPLLLKVVVASWPHIVP*LLKVVV
Trigger: CACCACCACCTTCAGTAACAAGGGTACGATATGGGG...CCACGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp CACCAGCAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGCCCCATATCGTACCCTaGTTACTGAAGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: HQQSFCITGFHLLEGGSMPHIVP*LLKVVV
Trigger: CACCACCACCTTCAGTAACAAGGGTACGATATGGGG...CATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CTCTGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGCGAGAAAGGCATCCTTaGGAAATGCATTGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: LWTGWVWPSIYILGFTSERERHP*EMHWPR
Trigger: TCTGGGCCAATGCATTTCCAAAGGATGCCTTTCTCG...CTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATCAGTGTCCTACAGAATaGGCTGAGAAGATGATATCT +
Preference number: 5 (lower is better)
Translates to: GLVGGLVATGPHSLADPHQCPTE*AEKMIS
Trigger: AGATATCATCTTCTCAGCCAATTCTGTAGGACACTG...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGGTTCAAACAACCTTATaGGCTCAGTTCTGGGCTATG +
Preference number: 5 (lower is better)
Translates to: PVTNRKGERVPRPRADSVVQTTL*AQFWAM
Trigger: CATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAAC...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTCGCAACCATGGGCTTTaGTGTGTTTGGCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: QGPLICIHPNERADLLSLRNHGL*CVWLGL
Trigger: CAGCCCCAGCCAAACACACAAAAGCCCATGGTTGCG...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTCGCAACCATGGGCTTTaGTGTGTTTGGCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTRNHGL*CVWLGL
Trigger: CAGCCCCAGCCAAACACACAAAAGCCCATGGTTGCG...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTGGCCACGTGGCTTTGTTTCATTGTTTaGAGGCCTCTCTATTTTTCC +
Preference number: 5 (lower is better)
Translates to: ASQGSISSRVAAWALATWLCFIV*RPLYFS
Trigger: GGAAAAATAGAGAGGCCTCAAAACAATGAAACAAAG...CCACGTGGCCAGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCTGGTTGGTGAGGACCTaGAGGGTGAAAGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRWLVRT*RVKGFF
Trigger: GAAGAACCCTTTCACCCTCAAGGTCCTCACCAACCA...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680427.1
CDS-3UTR CAA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTACCAGGGAAGCTGGCTaGCTGTCTCTTCTGAGACAC +
Preference number: 5 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGTREAG*LSLLRH
Trigger: GTGTCTCAGAAGAGACAGCAAGCCAGCTTCCCTGGT...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTCCATCACCTCTCCCATaGACCACAACCATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGPSPLP*TTTISS
Trigger: GCTGGAGATGGTTGTGGTCAATGGGAGAGGTGATGG...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp AGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCACTGGTGGCGATGTCCGCTaGGTTGTTGGTGTAAGCGGA +
Preference number: 5 (lower is better)
Translates to: SAPKTRHLIFFCWRYTVTGGDVR*VVGVSG
Trigger: TCCGCTTACACCAACAACCAAGCGGACATCGCCACC...AGTGACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447819.1
CDS TCA 90 bp CTCAATCAGGATGTTATCACGGGGGTCCACGATGTGATCCTTCGCTaGCTGCTTGGTGATGGTTGGCGGCTGCGTCAGCTCATTCTGAAT +
Preference number: 5 (lower is better)
Translates to: LNQDVITGVHDVILR*LLGDGWRLRQLILN
Trigger: ATTCAGAATGAGCTGACGCAGCCGCCAACCATCACCAAGCAGTCAGCGAAGGATCACATCGTGGACCCCCGTGATAACATCCTGATTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000504476.5
ENST00000505079.5
CDS TCA 90 bp CTCAATCAGGATGTTATCACGGGGGTCCACGATGTGATCCTTCGCTaGCTGCTTGGTGATGGTTGGCGGCTGCGTCAGATCCATAGGAAT +
Preference number: 5 (lower is better)
Translates to: LNQDVITGVHDVILR*LLGDGWRLRQIHRN
Trigger: ATTCCTATGGATCTGACGCAGCCGCCAACCATCACCAAGCAGTCAGCGAAGGATCACATCGTGGACCCCCGTGATAACATCCTGATTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS TCA 90 bp AAGGATGGACTTTTGAAGCTGGAGGAGAATGGTGATCCAGACAGGTaGGGCTGGTCTAAGGAGCCCCTTGGGTTGTCCTTGGTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: KDGLLKLEENGDPDR*GWSKEPLGLSLVRE
Trigger: CTCTCTGACCAAGGACAACCCAAGGGGCTCCTTAGACCAGCCTCACCTGTCTGGATCACCATTCTCCTCCAGCTTCAAAAGTCCATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS GCA 90 bp CTGTCGATGTACTCAACCACAAAGTCAGTTCCGGGCCCGAAATTGTaGTTCCAGGTGATGTTGGCCCATTTACTGTTGGGGAGCACCGTG +
Preference number: 5 (lower is better)
Translates to: LSMYSTTKSVPGPKL*FQVMLAHLLLGSTV
Trigger: CACGGTGCTCCCCAACAGTAAATGGGCCAACATCACCTGGAAGCACAATTTCGGGCCCGGAACTGACTTTGTGGTTGAGTACATCGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000413225.5
CDS GCA 90 bp AGGTGTGACCACAGTGGTCCAAGGAGAGCTGAGCTCCAGATACAATaGCAGCACCTACCTCTCACACATAAGATGGGTTCTCACCTTCCG +
Preference number: 5 (lower is better)
Translates to: RCDHSGPRRAELQIQ*QHLPLTHKMGSHLP
Trigger: CGGAAGGTGAGAACCCATCTTATGTGTGAGAGGTAGGTGCTGGCATTGTATCTGGAGCTCAGCTCTCCTTGGACCACTGTGGTCACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS-3UTR CAA 90 bp CAACAGGGTTGTGGTCTGCTGTATGTATGTGAGCATGCGTGGGCACTGGGTGTGGGGTCCTTGGCGATGTaGAAGAATCTGCTGTTTCGT +
Preference number: 5 (lower is better)
Translates to: QQGCGLLYVCEHAWALGVGSLAM*KNLLFR
Trigger: ACGAAACAGCAGATTCTTCAACATCGCCAAGGACCC...CACACCCAGTGCCCACGCATGCTCACATACATACAGCAGACCACAACCCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGGGGTCCTTGGCGATGTaGAAGAATCTGCTGTTTCGT +
Preference number: 5 (lower is better)
Translates to: SLADPHIVPLLLKVVVASGSLAM*KNLLFR
Trigger: ACGAAACAGCAGATTCTTCAACATCGCCAAGGACCC...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGAGATCACCACGCGGGTCTAGGTTTTCCTaGGGCCACAGAGGAGATTTA +
Preference number: 5 (lower is better)
Translates to: ETGSSLTLTSRGKKRSPRGSRFS*GHRGDL
Trigger: TAAATCTCCTCTGTGGCCCAAGGAAAACCTAGACCC...GCGTGGTGATCTCTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTAGAGACACGTTTGTCTaGGGTGATGGGCTCCATGGA +
Preference number: 5 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSRDTFV*GDGLHG
Trigger: TCCATGGAGCCCATCACCCAAGACAAACGTGTCTCT...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAGAGACACGTTTGTCTaGGGTGATGGGCTCCATGGA +
Preference number: 5 (lower is better)
Translates to: STACSETGSSLTLTSRGKRDTFV*GDGLHG
Trigger: TCCATGGAGCCCATCACCCAAGACAAACGTGTCTCT...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGGGTTTGGGGTTTCCATaGGCTCGACACACCAGTCTC +
Preference number: 5 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQGLGFP*ARHTSL
Trigger: GAGACTGGTGTGTCGAGCCAATGGAAACCCCAAACC...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTGGTTTGGGGTTTCCATaGGCTCGACACACCAGTCTC +
Preference number: 5 (lower is better)
Translates to: QGPLICIHPNERADLLSLGLGFP*ARHTSL
Trigger: GAGACTGGTGTGTCGAGCCAATGGAAACCCCAAACC...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTATGCCCTGGTCCTCTTaGCGGATCATCTTAATTTCC +
Preference number: 5 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLMPWSS*RIILIS
Trigger: GGAAATTAAGATGATCCGCAAAGAGGACCAGGGCAT...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp CTGAGAACTGCAGGTCTGCGAGTGTCTCCATTTGGGGTGACTGGTGAGGACGTGATGCCCTGGTCCTCTTaGCGGATCATCTTAATTTCC +
Preference number: 5 (lower is better)
Translates to: LRTAGLRVSPFGVTGEDVMPWSS*RIILIS
Trigger: GGAAATTAAGATGATCCGCAAAGAGGACCAGGGCAT...CACGTCCTCACCAGTCACCCCAAATGGAGACACTCGCAGACCTGCAGTTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGACGCTGCCGGGGTACTaGGAATGGTCATGCCAGACC +
Preference number: 5 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLTLPGY*EWSCQT
Trigger: GGTCTGGCATGACCATTCCAAGTACCCCGGCAGCGT...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACACGTGATCTCCATGTaGTTCTTTCTGGTCCCCTCT +
Preference number: 5 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQHVISM*FFLVPS
Trigger: AGAGGGGACCAGAAAGAACAACATGGAGATCACGTG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTCCCTCTGTTTCCTCCTaGTCCTTTTTGACCGTGTAC +
Preference number: 5 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTPSVSS*SFLTVY
Trigger: GTACACGGTCAAAAAGGACAAGGAGGAAACAGAGGG...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTCCCCATATCGTACCCTaGTTACTGAAGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSPHIVP*LLKVVV
Trigger: CACCACCACCTTCAGTAACAAGGGTACGATATGGGG...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAACTGGTCCTCACAGCTaGGCAGACCCCCATATCGTA +
Preference number: 5 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPTGPHS*ADPHIV
Trigger: TACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGT...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCGGGCTTGTGGGTGGCTaGGTGGCTACTGGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPGLVGG*VATGPH
Trigger: GTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
ENST00000504476.5
CDS-3UTR CAA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGAAGAAAACAGAGACATaGGGTCTGGAGGGGAAGATG +
Preference number: 5 (lower is better)
Translates to: WTGWVWPSIYILGFTSEEKKTET*GLEGKM
Trigger: CATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCTT...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGTGGCCCAGAGGTGGTTaGAATATTACAGCCTGTCTA +
Preference number: 5 (lower is better)
Translates to: WTGWVWPSIYILGFTSEEWPRGG*NITACL
Trigger: TAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAGATGGCCCAGAGGTGGTTaGAATATTACAGCCTGTCTA +
Preference number: 5 (lower is better)
Translates to: LLVLPEHLHRLPCSPGDRWPRGG*NITACL
Trigger: TAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA...TCTATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTTCCTTTGGAAATGCATaGGCCCAGAGGTGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLSFGNA*AQRWFE
Trigger: TTCAAACCACCTCTGGGCCAATGCATTTCCAAAGGA...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGACACAGTCACTGGCGTaGAAGTCCTTTCTATCAGTG +
Preference number: 5 (lower is better)
Translates to: WTGWVWPSIYILGFTSEETQSLA*KSFLSV
Trigger: CACTGATAGAAAGGACTTCAACGCCAGTGACTGTGT...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTACACAGTCACTGGCGTaGAAGTCCTTTCTATCAGTG +
Preference number: 5 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPTQSLA*KSFLSV
Trigger: CACTGATAGAAAGGACTTCAACGCCAGTGACTGTGT...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGCAGTGTCCTACAGAATaGGCTGAGAAGATGATATCT +
Preference number: 5 (lower is better)
Translates to: PVTNRKGERVPRPRADSVQCPTE*AEKMIS
Trigger: AGATATCATCTTCTCAGCCAATTCTGTAGGACACTG...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGTCCCGACTTCAGGGCTaGCCAGGGGCAGGGGCAATG +
Preference number: 5 (lower is better)
Translates to: FKQPYWLSSGLWFLTSRESRLQG*PGAGAM
Trigger: CATTGCCCCTGCCCCTGGCAAGCCCTGAAGTCGGGA...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCGTGTGGCAGGGGAGCTaGTCCGTTAGCTGGGAAACC +
Preference number: 5 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSVWQGS*SVSWET
Trigger: GGTTTCCCAGCTAACGGACAAGCTCCCCTGCCACAC...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAATGCTTGGCAACAGGGTaGTGGTCTGCTGTATGTATG +
Preference number: 5 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQCLATG*WSAVCM
Trigger: CATACATACAGCAGACCACAACCCTGTTGCCAAGCA...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp ATGGCATGGTGCTGTCCTGGCTTCACTGTTGGTATGTCTTGGGGTAGTTGCTTGCCTTGGAAGCACTGCTaGGCAACAGGGTTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: MAWCCPGFTVGMSWGSCLPWKHC*ATGLWS
Trigger: AGACCACAACCCTGTTGCCAAGCAGTGCTTCCAAGG...CAAGCAACTACCCCAAGACATACCAACAGTGAAGCCAGGACAGCACCATGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGCTCAAGCAGGATCCTTaGCCAACTAACGGTGTAGAT +
Preference number: 5 (lower is better)
Translates to: WTGWVWPSIYILGFTSEELKQDP*PTNGVD
Trigger: ATCTACACCGTTAGTTGGCAAAGGATCCTGCTTGAG...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CACTTCTGGTCCTGCCGGAACACTTGCATAGGCTGCCCTGCTCTCCTGGAGATAACGGGAAAGAACAAATaGGAATGGTGGGGGATATGG +
Preference number: 5 (lower is better)
Translates to: HFWSCRNTCIGCPALLEITGKNK*EWWGIW
Trigger: CCATATCCCCCACCATTCCAATTTGTTCTTTCCCGT...TATCTCCAGGAGAGCAGGGCAGCCTATGCAAGTGTTCCGGCAGGACCAGAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS TCA 90 bp CCCAGCGTATGTGCAGACCTGTTTCAAAGTGGGCAGATCCCTTTGTaGTTTAAAAGGCCTGCAGGACGGCCTGAAGTACAGGTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: PSVCADLFQSGQIPL*FKRPAGRPEVQVLR
Trigger: CCTTAGCACCTGTACTTCAGGCCGTCCTGCAGGCCTTTTAAATCACAAAGGGATCTGCCCACTTTGAAACAGGTCTGCACATACGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503221.1
CDS CCA 90 bp GGGCGTTACAACTGTAGTCGGTCTGCATGTCCTGCAGCATCACGTTaGAGAAGTATAGGTCTCCGTTATGGCCCTGAGAGACACGTTTGT +
Preference number: 5 (lower is better)
Translates to: GRYNCSRSACPAASR*RSIGLRYGPERHVC
Trigger: ACAAACGTGTCTCTCAGGGCCATAACGGAGACCTATACTTCTCCAACGTGATGCTGCAGGACATGCAGACCGACTACAGTTGTAACGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504149.1
ENST00000504476.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 90 bp CATGATACAGGAACAGTGCATTCTCGTGGCTCAGCGTACCAGCCCTaGGATCGATTCTTACCAGGGGCTCTGAGAATGCCCGTAATTTTC +
Preference number: 5 (lower is better)
Translates to: HDTGTVHSRGSAYQP*DRFLPGALRMPVIF
Trigger: GAAAATTACGGGCATTCTCAGAGCCCCTGGTAAGAATCGATCCCAGGGCTGGTACGCTGAGCCACGAGAATGCACTGTTCCTGTATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS CCA 90 bp TTGGAAGGTAAAGGGACTTGCCCAGGAGACAAAGGTGGTGCCCACTaGGTCCTACAATTCTACAACTGTGGCAGAAGAGTTCTGGGTGCT +
Preference number: 5 (lower is better)
Translates to: LEGKGTCPGDKGGAH*VLQFYNCGRRVLGA
Trigger: AGCACCCAGAACTCTTCTGCCACAGTTGTAGAATTGTAGGACCCAGTGGGCACCACCTTTGTCTCCTGGGCAAGTCCCTTTACCTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS-3UTR CAA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGAGAGACACGTTTGTCTaGGGTGATGGGCTCCATGGA +
Preference number: 5 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQRDTFV*GDGLHG
Trigger: TCCATGGAGCCCATCACCCAAGACAAACGTGTCTCT...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGTCCTGCAGCATCACGTaGGAGAAGTATAGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQSCSIT*EKYRSP
Trigger: CGGAGACCTATACTTCTCCAACGTGATGCTGCAGGA...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGATGCTGCCCATCTTGTaGGAGGCCAGGCAGAAATAC +
Preference number: 5 (lower is better)
Translates to: TACSETGSSLTLTSRGKKMLPIL*EARQKY
Trigger: GTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCAT...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp TCTCCCATTGACCACAACCATCTCCAGCTTGTAGTTACTGTAGGGGAAGAGGCGATGCTGCCCATCTTGTaGGAGGCCAGGCAGAAATAC +
Preference number: 5 (lower is better)
Translates to: SPIDHNHLQLVVTVGEEAMLPIL*EARQKY
Trigger: GTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCAT...CGCCTCTTCCCCTACAGTAACTACAAGCTGGAGATGGTTGTGGTCAATGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504476.5
CDS-3UTR CAA 90 bp GGGTTCACAGTAACAAACACCAATCAGCTATCCTATTCCACTGGCCCAGATCTGCGGATGCTGCCCATCTaGTTGGAGGCCAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: GFTVTNTNQLSYSTGPDLRMLPI*LEARQK
Trigger: TTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCG...CAGATCTGGGCCAGTGGAATAGGATAGCTGATTGGTGTTTGTTACTGTGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGGTTAGGTGGTGCCGATaGCAAAGGTTCCCCATTCAC +
Preference number: 5 (lower is better)
Translates to: TACSETGSSLTLTSRGKKVRWCR*QRFPIH
Trigger: GTGAATGGGGAACCTTTGCAATCGGCACCACCTAAC...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGACTTGGTTTTCAGCTTaGCCCAGGATGTTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: TACSETGSSLTLTSRGKKTWFSA*PRMLVA
Trigger: CGCCACCAACATCCTGGGCAAAGCTGAAAACCAAGT...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAACTGCTCCCAACCTCGTaGATGGCAATGACACGGAAC +
Preference number: 5 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQLLPTS*MAMTRN
Trigger: GTTCCGTGTCATTGCCATCAACGAGGTTGGGAGCAG...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp ACAAAGAGCATTGAGTCCTCCCTAGGTGGGGGCATCACAACACTGAGTACGGTGCACGTGATCTCCATGTaGTTCTTTCTGGTCCCCTCT +
Preference number: 5 (lower is better)
Translates to: TKSIESSLGGGITTLSTVHVISM*FFLVPS
Trigger: AGAGGGGACCAGAAAGAACAACATGGAGATCACGTG...CACCGTACTCAGTGTTGTGATGCCCCCACCTAGGGAGGACTCAATGCTCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp GGGCTTGTGGGTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATTTAAAGGCCACATATTaGAGAGTGTATCCAATCATG +
Preference number: 5 (lower is better)
Translates to: GLVGGLVATGPHSLADPHLKATY*RVYPIM
Trigger: CATGATTGGATACACTCTCAAATATGTGGCCTTTAA...ATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCACCCACAAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CAA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAAATCTGCTTTCCTACTTaGGTCCCGTTAAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQICFPT*VPLKAT
Trigger: TGTGGCCTTTAACGGGACCAAAGTAGGAAAGCAGAT...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CAA 90 bp GGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTATCTGCTTTCCTACTTaGGTCCCGTTAAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: GGYWSSQLGRPPYRTLVTICFPT*VPLKAT
Trigger: TGTGGCCTTTAACGGGACCAAAGTAGGAAAGCAGAT...AGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CAA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGTCTCGTACTGGGTACTaGCCGCCGCGACTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: PQCPTELAEKMISARDGRSRTGY*PPRLLL
Trigger: CAAGAGGAGTCGCGGCGGCAAGTACCCAGTACGAGA...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GTGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTCCTTTTTGCCTATCTTaGCAAAAAGGATTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: VAWWLLVLTAWQTPISYPPFCLS*QKGFSW
Trigger: CCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGG...AGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAAACACAGTCACTGGCGTaGAAGTCCTTTCTATCAGTG +
Preference number: 5 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQTQSLA*KSFLSV
Trigger: CACTGATAGAAAGGACTTCAACGCCAGTGACTGTGT...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCCAGACCTGCTCAGTCTaGGGGCAAGTCCCCATCCAC +
Preference number: 5 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPQTCSV*GQVPIH
Trigger: GTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTG...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAGACCACCTGCCTTCCTaGCTTGGGGAAAACTTAATT +
Preference number: 5 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQDHLPS*LGENLI
Trigger: AATTAAGTTTTCCCCAAGCAAGGAAGGCAGGTGGTC...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TCTAGAAGTGAGCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGGCAGGGCAAGCAATGTaGGCACTGGCTGATTTTCAG +
Preference number: 5 (lower is better)
Translates to: SRSEHSAPKTRHLIFFCWAGQAM*ALADFQ
Trigger: CTGAAAATCAGCCAGTGCCAACATTGCTTGCCCTGC...CCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGCTCACTTCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CCCACAGAACAGCAGCCTGAGAGAGGGCTAACAGCATTTTCTTCATACACAAAGGGGCTCAGTTGCACCTaGCAGGGCAAGCAATGTTGG +
Preference number: 5 (lower is better)
Translates to: PTEQQPERGLTAFSSYTKGLSCT*QGKQCW
Trigger: CCAACATTGCTTGCCCTGCAAGGTGCAACTGAGCCC...CTTTGTGTATGAAGAAAATGCTGTTAGCCCTCTCTCAGGCTGCTGTTCTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCTGCCCGTGCCATTGCTaGGGCAAAGTTTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSCPCHC*GKVSHS
Trigger: GGAGTGGGAAACTTTGCCCAAGCAATGGCACGGGCA...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCGTGGGGAGCGGTGCCTaGTGCCGGCCTCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILVGSGA*CRPPRN
Trigger: GTTCCTGGGAGGCCGGCACAAGGCACCGCTCCCCAC...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp AGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGGCTTCGGGCCTTGGTCTCCTCTaGACATATCAAGCTCTTTGT +
Preference number: 5 (lower is better)
Translates to: SLADPHIVPLLLKVVVASGLGLL*TYQALC
Trigger: ACAAAGAGCTTGATATGTCAAGAGGAGACCAAGGCC...CGAAGCCACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS TCA 90 bp CTAAAAGTATACTTGGGCCCAGGAGGATGCATGTCCTCTAAAAGCTaGTCTTTCCTGTGCAGAGGAGGATGCTCAGCCACAGAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: LKVYLGPGGCMSSKS*SFLCRGGCSATESL
Trigger: CAGGCTCTCTGTGGCTGAGCATCCTCCTCTGCACAGGAAAGATCAGCTTTTAGAGGACATGCATCCTCCTGGGCCCAAGTATACTTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS GCA 90 bp CTGACAACGCATCCAATTCAGGCTGCAAGGAAGGACCACATTCTCTaGTCTACTCATGATGCCAGTAACAGCGTCATCCTGACGGTTTCC +
Preference number: 5 (lower is better)
Translates to: LTTHPIQAARKDHIL*STHDASNSVILTVS
Trigger: GGAAACCGTCAGGATGACGCTGTTACTGGCATCATGAGTAGAGCAGAGAATGTGGTCCTTCCTTGCAGCCTGAATTGGATGCGTTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS-3UTR CAA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCCTCCAGCGTCCCAAATaGCACATAAGTCAATCAACC +
Preference number: 5 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTLQRPK*HISQST
Trigger: GGTTGATTGACTTATGTGCAATTTGGGACGCTGGAG...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGTCCTTCGCTGACTGCTaGGTGATGGTTGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: FKQPYWLSSGLWFLTSRESFADC*VMVGGC
Trigger: GCAGCCGCCAACCATCACCAAGCAGTCAGCGAAGGA...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGGGGTCCTTGGCGATGTaGAAGAATCTGCTGTTTCGT +
Preference number: 5 (lower is better)
Translates to: TACSETGSSLTLTSRGKKGSLAM*KNLLFR
Trigger: ACGAAACAGCAGATTCTTCAACATCGCCAAGGACCC...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGGGGTCTAGGTTTTCCTaGGGCCACAGAGGAGATTTA +
Preference number: 5 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQGSRFS*GHRGDL
Trigger: TAAATCTCCTCTGTGGCCCAAGGAAAACCTAGACCC...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTTTAAAGTTCTCAAACTaGGCCTTATCAGATGGGAGG +
Preference number: 5 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLLKFSN*ALSDGR
Trigger: CCTCCCATCTGATAAGGCCAAGTTTGAGAACTTTAA...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGTTAAAGTTCTCAAACTaGGCCTTATCAGATGGGAGG +
Preference number: 5 (lower is better)
Translates to: WTGWVWPSIYILGFTSEELKFSN*ALSDGR
Trigger: CCTCCCATCTGATAAGGCCAAGTTTGAGAACTTTAA...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTTGCTCGTTGGAGGTGTaGCACTGGTACACAGCCCTG +
Preference number: 5 (lower is better)
Translates to: WPRGGLNITACLRVLVWICSLEV*HWYTAL
Trigger: CAGGGCTGTGTACCAGTGCAACACCTCCAACGAGCA...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp AGCACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGATGCCCTGGTCCTCTTaGCGGATCATCTTAATTTCC +
Preference number: 5 (lower is better)
Translates to: STACSETGSSLTLTSRGKMPWSS*RIILIS
Trigger: GGAAATTAAGATGATCCGCAAAGAGGACCAGGGCAT...CTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp GGCCCCTTTCAGTTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCATGCCCTGGTCCTCTTaGCGGATCATCTTAATTTCC +
Preference number: 5 (lower is better)
Translates to: GPFQLRRGEVNDSTQEVTMPWSS*RIILIS
Trigger: GGAAATTAAGATGATCCGCAAAGAGGACCAGGGCAT...GGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAACTGAAAGGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCGGTCTGGCCGTCCTTaGGGCAGGGCAGCCAAACGG +
Preference number: 5 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILRSGRP*GRAAKR
Trigger: CCGTTTGGCTGCCCTGCCCAAAGGACGGCCAGACCG...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
CDS-3UTR CAA 90 bp CAAAGCGTTTTCTGGAAAGGCCAGTCCTTTAATTCAGCTCACAGGCACACTTCCCTGCTCCCAACCTCGTaGATGGCAATGACACGGAAC +
Preference number: 5 (lower is better)
Translates to: QSVFWKGQSFNSAHRHTSLLPTS*MAMTRN
Trigger: GTTCCGTGTCATTGCCATCAACGAGGTTGGGAGCAG...GGAAGTGTGCCTGTGAGCTGAATTAAAGGACTGGCCTTTCCAGAAAACGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGATTGATTGTCTCCAGGTaGGGCTGCCGGACTCGGAAA +
Preference number: 5 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRLIVSR*GCRTRK
Trigger: TTTCCGAGTCCGGCAGCCCAACCTGGAGACAATCAA...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CAA 90 bp CCCACAGAACAGCAGCCTGAGAGAGGGCTAACAGCATTTTCTTCATACACAAAGTTGATTGTCTCCAGGTaGGGCTGCCGGACTCGGAAA +
Preference number: 5 (lower is better)
Translates to: PTEQQPERGLTAFSSYTKLIVSR*GCRTRK
Trigger: TTTCCGAGTCCGGCAGCCCAACCTGGAGACAATCAA...CTTTGTGTATGAAGAAAATGCTGTTAGCCCTCTCTCAGGCTGCTGTTCTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAAGGGCGGACAGTGTGTTAAAGGCCACATATTaGAGAGTGTATCCAATCATG +
Preference number: 5 (lower is better)
Translates to: PVTNRKGERVPRPRADSVLKATY*RVYPIM
Trigger: CATGATTGGATACACTCTCAAATATGTGGCCTTTAA...CACACTGTCCGCCCTTGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CAA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTACCGCCGCGACTCCTCTaGATGAAACAGACGATGAGC +
Preference number: 5 (lower is better)
Translates to: MHWPRGGLNITACLRVLVPPRLL*MKQTMS
Trigger: GCTCATCGTCTGTTTCATCAAGAGGAGTCGCGGCGG...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGTCTCGTACTGGGTACTaGCCGCCGCGACTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: FKQPYWLSSGLWFLTSRESRTGY*PPRLLL
Trigger: CAAGAGGAGTCGCGGCGGCAAGTACCCAGTACGAGA...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GCCCTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAATCCTCCTTGTCCTTTTaGACCGTGTACTGGCCGATG +
Preference number: 5 (lower is better)
Translates to: ALTSEEYSTLKARCVTKQSSLSF*TVYWPM
Trigger: CATCGGCCAGTACACGGTCAAAAAGGACAAGGAGGA...TTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGTCATTGGGAGGGGGCTaGTGGGTGGCTTGGTGGCTA +
Preference number: 5 (lower is better)
Translates to: FKQPYWLSSGLWFLTSRESLGGG*WVAWWL
Trigger: TAGCCACCAAGCCACCCACAAGCCCCCTCCCAATGA...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTAAGAAAACAGAGACATaGGGTCTGGAGGGGAAGATG +
Preference number: 5 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGKKTET*GLEGKM
Trigger: CATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCTT...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CAAAGCTTTTGCATCACAGGGTTCCATCTCCTCGAGGGTGGCAGCATGGGCCCTCCTTTTTGCCTATCTTaGCAAAAAGGATTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: QSFCITGFHLLEGGSMGPPFCLS*QKGFSW
Trigger: CCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGG...AGGGCCCATGCTGCCACCCTCGAGGAGATGGAACCCTGTGATGCAAAAGCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp GCACAGTGCCCCCAAGACCAGACACCTGATTTTCTTCTGCTGGAGGTACACAGTTGGCCCAGAGGTGGTTaGAATATTACAGCCTGTCTA +
Preference number: 5 (lower is better)
Translates to: AQCPQDQTPDFLLLEVHSWPRGG*NITACL
Trigger: TAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA...ACTGTGTACCTCCAGCAGAAGAAAATCAGGTGTCTGGTCTTGGGGGCACTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAGCATTGCTAATACCTTaGCGGCTTAAACATGTGGCA +
Preference number: 5 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQALLIP*RLKHVA
Trigger: TGCCACATGTTTAAGCCGCAAAGGTATTAGCAATGC...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGACCACCTGCCTTCCTaGCTTGGGGAAAACTTAATT +
Preference number: 5 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGDHLPS*LGENLI
Trigger: AATTAAGTTTTCCCCAAGCAAGGAAGGCAGGTGGTC...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCATGCTTGGCAACAGGGTaGTGGTCTGCTGTATGTATG +
Preference number: 5 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPCLATG*WSAVCM
Trigger: CATACATACAGCAGACCACAACCCTGTTGCCAAGCA...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CCCACAGAACAGCAGCCTGAGAGAGGGCTAACAGCATTTTCTTCATACACAAAGCCTTGGAAGCACTGCTaGGCAACAGGGTTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: PTEQQPERGLTAFSSYTKPWKHC*ATGLWS
Trigger: AGACCACAACCCTGTTGCCAAGCAGTGCTTCCAAGG...CTTTGTGTATGAAGAAAATGCTGTTAGCCCTCTCTCAGGCTGCTGTTCTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTAGCCACAAAGTCTGGCTaGGACTCACATGGGGTAGCC +
Preference number: 5 (lower is better)
Translates to: MHWPRGGLNITACLRVLVATKSG*DSHGVA
Trigger: GGCTACCCCATGTGAGTCCAAGCCAGACTTTGTGGC...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTAAGTCTTTACATCTGTaGAACTCCAGCCCAGCAAAT +
Preference number: 5 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLKSLHL*NSSPAN
Trigger: ATTTGCTGGGCTGGAGTTCAACAGATGTAAAGACTT...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGAGGTGGCGATGTCCGCTaGGTTGTTGGTGTAAGCTTC +
Preference number: 5 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRGGDVR*VVGVSF
Trigger: GAAGCTTACACCAACAACCAAGCGGACATCGCCACC...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425360.5
CDS TCA 90 bp TTGCTGTGCTACTGGTATGCACTAAATGTGGCATTAACAAGAGCATaGACAAGCTCCCATCCCCATCCTCCTGGAGGGTGGCTAGAAGAG +
Preference number: 5 (lower is better)
Translates to: LLCYWYALNVALTRA*TSSHPHPPGGWLEE
Trigger: CTCTTCTAGCCACCCTCCAGGAGGATGGGGATGGGAGCTTGTTCATGCTCTTGTTAATGCCACATTTAGTGCATACCAGTAGCACAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS GCA 90 bp AGGTTGTCCCCAGAGCCCTCATGGGAGCACTCACAATCATATTCCTaGCTCCCTCAAGAGGTGAACACTCACTGTTCTTTGGAGTTCATT +
Preference number: 5 (lower is better)
Translates to: RLSPEPSWEHSQSYS*LPQEVNTHCSLEFI
Trigger: AATGAACTCCAAAGAACAGTGAGTGTTCACCTCTTGAGGGAGGCAGGAATATGATTGTGAGTGCTCCCATGAGGGCTCTGGGGACAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CCA 90 bp GCAAGTAAGAACTGCTCCACCACACTTGACCCTGGACTGCTTTCATaGGCAAGTCAAGACCACAGAGGACGATCCATAGGAATTTCGATG +
Preference number: 5 (lower is better)
Translates to: ASKNCSTTLDPGLLS*ASQDHRGRSIGISM
Trigger: CATCGAAATTCCTATGGATCGTCCTCTGTGGTCTTGACTTGCCCATGAAAGCAGTCCAGGGTCAAGTGTGGTGGAGCAGTTCTTACTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493914.5
CDS CCA 90 bp CTGAGCTCCAGATACAATGCCAGCACCTACCTCTCACACATAAGATaGGTTCTCACCTTCCGAGGGCTTGAGGACTTGCAAGTCTCATTT +
Preference number: 5 (lower is better)
Translates to: LSSRYNASTYLSHIR*VLTFRGLEDLQVSF
Trigger: AAATGAGACTTGCAAGTCCTCAAGCCCTCGGAAGGTGAGAACCCATCTTATGTGTGAGAGGTAGGTGCTGGCATTGTATCTGGAGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS-3UTR CAA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGTCCTTCGCTGACTGCTaGGTGATGGTTGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGSFADC*VMVGGC
Trigger: GCAGCCGCCAACCATCACCAAGCAGTCAGCGAAGGA...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTGACACCCGGGGGTCCTaGGCGATGTTGAAGAATCTG +
Preference number: 5 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLDTRGS*AMLKNL
Trigger: CAGATTCTTCAACATCGCCAAGGACCCCCGGGTGTC...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp ACAGCTTGTTCTGAAACTGGCAGCTCCCTAACCCTGACATCACGAGGCAAGAAGATCCAGGTTGCTTCCTaGCCCATTCTTAAACCATCG +
Preference number: 5 (lower is better)
Translates to: TACSETGSSLTLTSRGKKIQVAS*PILKPS
Trigger: CGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGAT...CTTCTTGCCTCGTGATGTCAGGGTTAGGGAGCTGCCAGTTTCAGAACAAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGATCCAGGTTGCTTCCTaGCCCATTCTTAAACCATCG +
Preference number: 5 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQIQVAS*PILKPS
Trigger: CGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGAT...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAATGCCCTGGTCCTCTTaGCGGATCATCTTAATTTCC +
Preference number: 5 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPMPWSS*RIILIS
Trigger: GGAAATTAAGATGATCCGCAAAGAGGACCAGGGCAT...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCCTGCTCCCAACCTCGTaGATGGCAATGACACGGAAC +
Preference number: 5 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPLLPTS*MAMTRN
Trigger: GTTCCGTGTCATTGCCATCAACGAGGTTGGGAGCAG...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGCCCCACACTGTGACGTaGTTCCAGGCCTCTCGAGTC +
Preference number: 5 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGPHTVT*FQASRV
Trigger: GACTCGAGAGGCCTGGAACAACGTCACAGTGTGGGG...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CAA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATTGATTGTCTCCAGGTaGGGCTGCCGGACTCGGAAA +
Preference number: 5 (lower is better)
Translates to: MHWPRGGLNITACLRVLVLIVSR*GCRTRK
Trigger: TTTCCGAGTCCGGCAGCCCAACCTGGAGACAATCAA...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CAA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCAATCTGCTTTCCTACTTaGGTCCCGTTAAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPICFPT*VPLKAT
Trigger: TGTGGCCTTTAACGGGACCAAAGTAGGAAAGCAGAT...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CAA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGGTTCCGGGCCCGAAATaGTGCTTCCAGGTGATGTTG +
Preference number: 5 (lower is better)
Translates to: PQCPTELAEKMISARDGRVPGPK*CFQVML
Trigger: CAACATCACCTGGAAGCACAATTTCGGGCCCGGAAC...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTAGCCTCTGAGCTTTCGTaGCCCTCTGTTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: MHWPRGGLNITACLRVLVASELS*PSVSSL
Trigger: CAAGGAGGAAACAGAGGGCAACGAAAGCTCAGAGGC...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CCCACAGAACAGCAGCCTGAGAGAGGGCTAACAGCATTTTCTTCATACACAAAGCCCCATATCGTACCCTaGTTACTGAAGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: PTEQQPERGLTAFSSYTKPHIVP*LLKVVV
Trigger: CACCACCACCTTCAGTAACAAGGGTACGATATGGGG...CTTTGTGTATGAAGAAAATGCTGTTAGCCCTCTCTCAGGCTGCTGTTCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAACAACCTTTTTGCCTATCTTaGCAAAAAGGATTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GRPAQSWGKSPSTHHVKQPFCLS*QKGFSW
Trigger: CCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGG...TTGTTTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp AAGACAATGAGAAGTCCCGTAACCAACAGAAAAGGTGAGCGTGTGCCGAGGCCATCCTTTGGAAATGCATaGGCCCAGAGGTGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: KTMRSPVTNRKGERVPRPSFGNA*AQRWFE
Trigger: TTCAAACCACCTCTGGGCCAATGCATTTCCAAAGGA...TGGCCTCGGCACACGCTCACCTTTTCTGTTGGTTACGGGACTTCTCATTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp TCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTGTTACTGAAGGTGGTGGTGTTCAAACAACCTTATaGGCTCAGTTCTGGGCTATG +
Preference number: 5 (lower is better)
Translates to: SSQLGRPPYRTLVTEGGGVQTTL*AQFWAM
Trigger: CATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAAC...ACCACCACCTTCAGTAACAAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGGCAGGGCAAGCAATGTaGGCACTGGCTGATTTTCAG +
Preference number: 5 (lower is better)
Translates to: LTSEEYSTLKARCVTKQEAGQAM*ALADFQ
Trigger: CTGAAAATCAGCCAGTGCCAACATTGCTTGCCCTGC...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GTATCCAAGCAGGTGTTGGAGGAAATCCAGGGGAGGGGCCCTCCAAGCTCACACAATTTGGCCTTTTCATaGCTCATGCAGTCAGTTTAT +
Preference number: 5 (lower is better)
Translates to: VSKQVLEEIQGRGPPSSHNLAFS*LMQSVY
Trigger: ATAAACTGACTGCATGAGCAATGAAAAGGCCAAATT...GTGTGAGCTTGGAGGGCCCCTCCCCTGGATTTCCTCCAACACCTGCTTGGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS TCA 90 bp GGCTTCTTTGCCTGTCTGCCAGACGCTTCAATTGTACTGGCCACTTaGAGCCATCCCAAATTCCAGCTCCTTAGAATTTCATGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: GFFACLPDASIVLAT*SHPKFQLLRISWLL
Trigger: CAAGAGCCATGAAATTCTAAGGAGCTGGAATTTGGGATGGCTTCAAGTGGCCAGTACAATTGAAGCGTCTGGCAGACAGGCAAAGAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS CCA 90 bp GATACGCAGGGCCTTATTAAAGTTCTCAAACTTGGCCTTATCAGATaGGAGGTCCCCACCTTTCTTGTACCATGCGATGTCTGGTGTTGG +
Preference number: 5 (lower is better)
Translates to: DTQGLIKVLKLGLIR*EVPTFLVPCDVWCW
Trigger: CCAACACCAGACATCGCATGGTACAAGAAAGGTGGGGACCTCCCATCTGATAAGGCCAAGTTTGAGAACTTTAATAAGGCCCTGCGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 90 bp AAACAAGTTATCACTAAACGTGGCCTTTCTCCTCTTCTATACAGCTaGGGACACCCAGGTGGCCTAAAAGTATACTTGGGCCCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: KQVITKRGLSPLLYS*GHPGGLKVYLGPGG
Trigger: TCCTCCTGGGCCCAAGTATACTTTTAGGCCACCTGGGTGTCCCCAGCTGTATAGAAGAGGAGAAAGGCCACGTTTAGTGATAACTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS-3UTR CAA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTAAGAGACACGTTTGTCTaGGGTGATGGGCTCCATGGA +
Preference number: 5 (lower is better)
Translates to: MHWPRGGLNITACLRVLVRDTFV*GDGLHG
Trigger: TCCATGGAGCCCATCACCCAAGACAAACGTGTCTCT...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp TGGCTTGGTGGCTACTGGTCCTCACAGCTTGGCAGACCCCCATATCGTACCCTTTTAAAGGCCACATATTaGAGAGTGTATCCAATCATG +
Preference number: 5 (lower is better)
Translates to: WLGGYWSSQLGRPPYRTLLKATY*RVYPIM
Trigger: CATGATTGGATACACTCTCAAATATGTGGCCTTTAA...AAGGGTACGATATGGGGGTCTGCCAAGCTGTGAGGACCAGTAGCCACCAAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000504476.5
CDS-3UTR CAA 90 bp TGGACAGGGTGGGTGTGGCCCTCTATCTACATCCTGGGTTTCACCAGTGAGGAGTTAAAGGCCACATATTaGAGAGTGTATCCAATCATG +
Preference number: 5 (lower is better)
Translates to: WTGWVWPSIYILGFTSEELKATY*RVYPIM
Trigger: CATGATTGGATACACTCTCAAATATGTGGCCTTTAA...CTCCTCACTGGTGAAACCCAGGATGTAGATAGAGGGCCACACCCACCCTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CAA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTCCCCTCCTCCCACTaGCAAAGTGGTGGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILLPSSH*QSGGCA
Trigger: GGCACAGCCACCACTTTGCAAGTGGGAGGAGGGGAG...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CTCACTTCTGAGGAATACAGCACACTGAAGGCCCGATGTGTTACAAAGCAAGAGGTCCTGGCTTCACTGTaGGTATGTCTTGGGGTAGTT +
Preference number: 5 (lower is better)
Translates to: LTSEEYSTLKARCVTKQEVLASL*VCLGVV
Trigger: AACTACCCCAAGACATACCAACAGTGAAGCCAGGAC...CTCTTGCTTTGTAACACATCGGGCCTTCAGTGTGCTGTATTCCTCAGAAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGCCACACCGTGGTTCTaGACTGCTCTGTCCCGCCCA +
Preference number: 5 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKATPWF*TALSRP
Trigger: TGGGCGGGACAGAGCAGTCAAGAACCACGGTGTGGC...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS TCA 90 bp GTCCTCCTGATTACTCCAGCCAAGAGGGCCCGAAGGGTGTGGATTTaGATATATCAGACATTAGAAAGGCAAGTAAGAACTGCTCCACCA +
Preference number: 5 (lower is better)
Translates to: VLLITPAKRARRVWI*IYQTLERQVRTAPP
Trigger: TGGTGGAGCAGTTCTTACTTGCCTTTCTAATGTCTGATATATTCAAATCCACACCCTTCGGGCCCTCTTGGCTGGAGTAATCAGGAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493914.5
CDS GCA 90 bp GGAAGGAGAGGGTTATCTTTAAGAGCCGCGAGTCTTGATGAGATTTaGAGGAAGGATGGACTTTTGAAGCTGGAGGAGAATGGTGATCCA +
Preference number: 5 (lower is better)
Translates to: GRRGLSLRAASLDEI*RKDGLLKLEENGDP
Trigger: TGGATCACCATTCTCCTCCAGCTTCAAAAGTCCATCCTTCCTGCAAATCTCATCAAGACTCGCGGCTCTTAAAGATAACCCTCTCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS-3UTR CAA 90 bp TTGAGACGTGGGGAAGTTAATGACTCCACTCAGGAGGTAACCTGTCCAGCACAGTTAAAGTTCTCAAACTaGGCCTTATCAGATGGGAGG +
Preference number: 5 (lower is better)
Translates to: LRRGEVNDSTQEVTCPAQLKFSN*ALSDGR
Trigger: CCTCCCATCTGATAAGGCCAAGTTTGAGAACTTTAA...CTGTGCTGGACAGGTTACCTCCTGAGTGGAGTCATTAACTTCCCCACGTCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS-3UTR CAA 90 bp CCCACAGAACAGCAGCCTGAGAGAGGGCTAACAGCATTTTCTTCATACACAAAGATGCCCTGGTCCTCTTaGCGGATCATCTTAATTTCC +
Preference number: 5 (lower is better)
Translates to: PTEQQPERGLTAFSSYTKMPWSS*RIILIS
Trigger: GGAAATTAAGATGATCCGCAAAGAGGACCAGGGCAT...CTTTGTGTATGAAGAAAATGCTGTTAGCCCTCTCTCAGGCTGCTGTTCTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGCTGCTCCCAACCTCGTaGATGGCAATGACACGGAAC +
Preference number: 5 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGLLPTS*MAMTRN
Trigger: GTTCCGTGTCATTGCCATCAACGAGGTTGGGAGCAG...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCCACGTGATCTCCATGTaGTTCTTTCTGGTCCCCTCT +
Preference number: 5 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPHVISM*FFLVPS
Trigger: AGAGGGGACCAGAAAGAACAACATGGAGATCACGTG...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000504476.5
CDS-3UTR CAA 90 bp CAGGGTCCCCTGATATGTATACACCCCAATGAAAGGGCAGACCTGCTCAGTCTTCAGAAACAATCCTGTTaGTCTTTCATTTTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: QGPLICIHPNERADLLSLQKQSC*SFILGG
Trigger: GCCTCCCAAAATGAAAGACAAACAGGATTGTTTCTG...AAGACTGAGCAGGTCTGCCCTTTCATTGGGGTGTATACATATCAGGGGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp AAAGGGCAGACCTGCTCAGTCTTGGGGCAAGTCCCCATCCACACACCATGTCAAAATTTGGCCTTTTCATaGCTCATGCAGTCAGTTTAT +
Preference number: 5 (lower is better)
Translates to: KGQTCSVLGQVPIHTPCQNLAFS*LMQSVY
Trigger: ATAAACTGACTGCATGAGCAATGAAAAGGCCAAATT...TTGACATGGTGTGTGGATGGGGACTTGCCCCAAGACTGAGCAGGTCTGCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS TCA 90 bp CTTTCCTCATTATCCAAAACAGAGATGGCCAGGATAGGATGGAGATaGCTATGGTTTGCAACACCCTGCTCACTAGAGGCTGTTTGCTTC +
Preference number: 5 (lower is better)
Translates to: LSSLSKTEMARIGWR*LWFATPCSLEAVCF
Trigger: GAAGCAAACAGCCTCTAGTGAGCAGGGTGTTGCAAACCATAGTCATCTCCATCCTATCCTGGCCATCTCTGTTTTGGATAATGAGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS GCA 90 bp ATCCAAAACAGAGATGGCCAGGATAGGATGGAGATGACTATGGTTTaGAACACCCTGCTCACTAGAGGCTGTTTGCTTCTCTTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: IQNRDGQDRMEMTMV*NTLLTRGCLLLFLL
Trigger: CAGCAAAAAGAGAAGCAAACAGCCTCTAGTGAGCAGGGTGTTGCAAACCATAGTCATCTCCATCCTATCCTGGCCATCTCTGTTTTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS GCA 90 bp GAAGGCTTAGCTAAGGTCCCACGAGATTCTAACGCATCTACGGGATaGCTAATCACCTTCTTTCCTCATTATCCAAAACAGAGATGGCCA +
Preference number: 5 (lower is better)
Translates to: EGLAKVPRDSNASTG*LITFFPHYPKQRWP
Trigger: TGGCCATCTCTGTTTTGGATAATGAGGAAAGAAGGTGATTAGGCATCCCGTAGATGCGTTAGAATCTCGTGGGACCTTAGCTAAGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS CCA 90 bp CTAGATGGTGTGAGCTTCTTGTTACCTTTGTATATCCCTTGTGTGTaGCAGTGTCTGGCACCTCACATTGTGGGTACTCAAGAAATGGCT +
Preference number: 5 (lower is better)
Translates to: LDGVSFLLPLYIPCV*QCLAPHIVGTQEMA
Trigger: AGCCATTTCTTGAGTACCCACAATGTGAGGTGCCAGACACTGCCACACACAAGGGATATACAAAGGTAACAAGAAGCTCACACCATCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS-3UTR CAA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAACGGGTGGTGAGGACCTaGAGGGTGAAAGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKRVVRT*RVKGFF
Trigger: GAAGAACCCTTTCACCCTCAAGGTCCTCACCACCCG...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCGGGTGGTGAGGACCTaGAGGGTGAAAGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILRVVRT*RVKGFF
Trigger: GAAGAACCCTTTCACCCTCAAGGTCCTCACCACCCG...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp AGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTGTTAGGTGGTGCCGATaGCAAAGGTTCCCCATTCAC +
Preference number: 5 (lower is better)
Translates to: RLITDRLILVSETILFVFVRWCR*QRFPIH
Trigger: GTGAATGGGGAACCTTTGCAATCGGCACCACCTAAC...AAAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTAATCTGCTTTCCTACTTaGGTCCCGTTAAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: MHWPRGGLNITACLRVLVICFPT*VPLKAT
Trigger: TGTGGCCTTTAACGGGACCAAAGTAGGAAAGCAGAT...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
CDS-3UTR CAA 90 bp TGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTATGGATTAAGAAAACAGAGACATaGGGTCTGGAGGGGAAGATG +
Preference number: 5 (lower is better)
Translates to: WPRGGLNITACLRVLVWIKKTET*GLEGKM
Trigger: CATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCTT...AATCCATACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGAAGAAAACAGAGACATaGGGTCTGGAGGGGAAGATG +
Preference number: 5 (lower is better)
Translates to: PQCPTELAEKMISARDGRKKTET*GLEGKM
Trigger: CATCTTCCCCTCCAGACCCAATGTCTCTGTTTTCTT...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCACACAGTCACTGGCGTaGAAGTCCTTTCTATCAGTG +
Preference number: 5 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPTQSLA*KSFLSV
Trigger: CACTGATAGAAAGGACTTCAACGCCAGTGACTGTGT...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CCTCAGTGTCCTACAGAATTGGCTGAGAAGATGATATCTGCTAGAGATGGAAGGACACCAGCAAAGCTTTaGCATCACAGGGTTCCATCT +
Preference number: 5 (lower is better)
Translates to: PQCPTELAEKMISARDGRTPAKL*HHRVPS
Trigger: AGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTGT...CCTTCCATCTCTAGCAGATATCATCTTCTCAGCCAATTCTGTAGGACACTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTAACACCAGCAAAGCTTTaGCATCACAGGGTTCCATCT +
Preference number: 5 (lower is better)
Translates to: MHWPRGGLNITACLRVLVTPAKL*HHRVPS
Trigger: AGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTGT...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp ATGCATTGGCCCAGAGGTGGTTTGAATATTACAGCCTGTCTACGTGTTCTGGTAACGGGAAAGAACAAATaGGAATGGTGGGGGATATGG +
Preference number: 5 (lower is better)
Translates to: MHWPRGGLNITACLRVLVTGKNK*EWWGIW
Trigger: CCATATCCCCCACCATTCCAATTTGTTCTTTCCCGT...TACCAGAACACGTAGACAGGCTGTAATATTCAAACCACCTCTGGGCCAATGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TTCAAACAACCTTATTGGCTCAGTTCTGGGCTATGGTTTCTTACCAGCAGAGAGATCCAGGTTGCTTCCTaGCCCATTCTTAAACCATCG +
Preference number: 5 (lower is better)
Translates to: FKQPYWLSSGLWFLTSREIQVAS*PILKPS
Trigger: CGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGAT...CTCTCTGCTGGTAAGAAACCATAGCCCAGAACTGAGCCAATAAGGTTGTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp GGATGGATTGTTTTAATTGACTTAGTGGTGGAGTTAGCTGTAAGAAAGGTAAAAATCCTGGTGGGGTCTTaGACCTCCAGGCGGACTTGG +
Preference number: 5 (lower is better)
Translates to: GWIVLIDLVVELAVRKVKILVGS*TSRRTW
Trigger: CCAAGTCCGCCTGGAGGTCAAAGACCCCACCAGGAT...TTTTACCTTTCTTACAGCTAACTCCACCACTAAGTCAATTAAAACAATCCATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403080.5
CDS-3UTR CAA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTTCCTTTGGAAATGCATaGGCCCAGAGGTGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLSFGNA*AQRWFE
Trigger: TTCAAACCACCTCTGGGCCAATGCATTTCCAAAGGA...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CAGGCTGATCACAGACAGACTGATCTTGGTCTCAGAAACAATCCTGTTTGTCTTACACAGTCACTGGCGTaGAAGTCCTTTCTATCAGTG +
Preference number: 5 (lower is better)
Translates to: QADHRQTDLGLRNNPVCLTQSLA*KSFLSV
Trigger: CACTGATAGAAAGGACTTCAACGCCAGTGACTGTGT...AAGACAAACAGGATTGTTTCTGAGACCAAGATCAGTCTGTCTGTGATCAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp TGCCCACTCCTGTTCCTCAAACGTCTTCAGAGTCAATGCAGCTCACATCTTAGACAGTGTCCTACAGAATaGGCTGAGAAGATGATATCT +
Preference number: 5 (lower is better)
Translates to: CPLLFLKRLQSQCSSHLRQCPTE*AEKMIS
Trigger: AGATATCATCTTCTCAGCCAATTCTGTAGGACACTG...TCTAAGATGTGAGCTGCATTGACTCTGAAGACGTTTGAGGAACAGGAGTGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAACCAGGGAAGCTGGCTaGCTGTCTCTTCTGAGACAC +
Preference number: 5 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKTREAG*LSLLRH
Trigger: GTGTCTCAGAAGAGACAGCAAGCCAGCTTCCCTGGT...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000404076.5
CDS TCA 90 bp CCTGATCTCTATGCAACACAGAGGACATTAATTATCAAGTTCCTATaGGCTGGGAGCCACTTTATCAAAGCCATGGTGCTGTCTGAAACC +
Preference number: 5 (lower is better)
Translates to: PDLYATQRTLIIKFL*AGSHFIKAMVLSET
Trigger: GGTTTCAGACAGCACCATGGCTTTGATAAAGTGGCTCCCAGCTCATAGGAACTTGATAATTAATGTCCTCTGTGTTGCATAGAGATCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS GCA 90 bp GGTGTGGATTTGAATATATCAGACATTAGAAAGGCAAGTAAGAACTaGTCCACCACACTTGACCCTGGACTGCTTTCATGGGCAAGTCAA +
Preference number: 5 (lower is better)
Translates to: GVDLNISDIRKASKN*STTLDPGLLSWASQ
Trigger: TTGACTTGCCCATGAAAGCAGTCCAGGGTCAAGTGTGGTGGAGCAGTTCTTACTTGCCTTTCTAATGTCTGATATATTCAAATCCACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493914.5
CDS-3UTR CAA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGGCAGGGTTCCCTTTaGCTTCACACTCAATCAGGA +
Preference number: 5 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKGQGSL*LHTQSG
Trigger: TCCTGATTGAGTGTGAAGCAAAAGGGAACCCTGCCC...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCAGAGACACGTTTGTCTaGGGTGATGGGCTCCATGGA +
Preference number: 5 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILRDTFV*GDGLHG
Trigger: TCCATGGAGCCCATCACCCAAGACAAACGTGTCTCT...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAACTTGGTTTTCAGCTTaGCCCAGGATGTTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKTWFSA*PRMLVA
Trigger: CGCCACCAACATCCTGGGCAAAGCTGAAAACCAAGT...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS TCA 90 bp AATCCTGTTCTGTTGGCGTCTCAGCACCACCGAGTTTTTGATGCCTaGTCTCTATGCAACACAGAGGACATTAATTATCAAGTTCCTATG +
Preference number: 5 (lower is better)
Translates to: NPVLLASQHHRVFDA*SLCNTEDINYQVPM
Trigger: CATAGGAACTTGATAATTAATGTCCTCTGTGTTGCATAGAGATCAGGCATCAAAAACTCGGTGGTGCTGAGACGCCAACAGAACAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS-3UTR CAA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAACTCCAGCGTCCCAAATaGCACATAAGTCAATCAACC +
Preference number: 5 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKLQRPK*HISQST
Trigger: GGTTGATTGACTTATGTGCAATTTGGGACGCTGGAG...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000404076.5
CDS-3UTR CAA 90 bp TGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCCTGGGGGTTAAAGTTCTCAAACTaGGCCTTATCAGATGGGAGG +
Preference number: 5 (lower is better)
Translates to: WYGFNPFCLSLQKGFSWGLKFSN*ALSDGR
Trigger: CCTCCCATCTGATAAGGCCAAGTTTGAGAACTTTAA...CCCCCAGGAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAATGCCCTGGTCCTCTTaGCGGATCATCTTAATTTCC +
Preference number: 5 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKMPWSS*RIILIS
Trigger: GGAAATTAAGATGATCCGCAAAGAGGACCAGGGCAT...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
CDS-3UTR CAA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAACACAGTCACTGGCGTaGAAGTCCTTTCTATCAGTG +
Preference number: 5 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKTQSLA*KSFLSV
Trigger: CACTGATAGAAAGGACTTCAACGCCAGTGACTGTGT...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAACACCAGCAAAGCTTTaGCATCACAGGGTTCCATCT +
Preference number: 5 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKTPAKL*HHRVPS
Trigger: AGATGGAACCCTGTGATGCAAAAGCTTTGCTGGTGT...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000404076.5
ENST00000425360.5
ENST00000447819.1
CDS-3UTR CAA 90 bp ATTGGGTCTGGAGGGGAAGATGCACAAAGCGAAATTAAGACAATGAGAAGTCCCCTTTGTTTCATTGTTTaGAGGCCTCTCTATTTTTCC +
Preference number: 5 (lower is better)
Translates to: IGSGGEDAQSEIKTMRSPLCFIV*RPLYFS
Trigger: GGAAAAATAGAGAGGCCTCAAAACAATGAAACAAAG...GGGACTTCTCATTGTCTTAATTTCGCTTTGTGCATCTTCCCCTCCAGACCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAATGTTTGTCTTTCATTTaGGGAGGCATGTGGGGGATG +
Preference number: 5 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKCLSFI*GGMWGM
Trigger: CATCCCCCACATGCCTCCCAAAATGAAAGACAAACA...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS-3UTR CAA 90 bp CGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAAGGATTCTCGCATTGCTAATACCTTaGCGGCTTAAACATGTGGCA +
Preference number: 5 (lower is better)
Translates to: RVLVWIQSFLPIFAKRILALLIP*RLKHVA
Trigger: TGCCACATGTTTAAGCCGCAAAGGTATTAGCAATGC...GAGAATCCTTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000447819.1
CDS CCA 90 bp GATTGTCTCACTGACTCCTGGAATGTAAGAATTAAGGAATCTCCCTaGAAATCTGAAAAAGACAGGCGAAGGACAAATAAAAAGGCCTAT +
Preference number: 5 (lower is better)
Translates to: DCLTDSWNVRIKESP*KSEKDRRRTNKKAY
Trigger: ATAGGCCTTTTTATTTGTCCTTCGCCTGTCTTTTTCAGATTTCCAGGGAGATTCCTTAATTCTTACATTCCAGGAGTCAGTGAGACAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS-3UTR CAA 90 bp CCTGTCTACGTGTTCTGGTATGGATTCAATCCTTTTTGCCTATCTTTGCAAAAACAGAAACAATCCTGTTaGTCTTTCATTTTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: PVYVFWYGFNPFCLSLQKQKQSC*SFILGG
Trigger: GCCTCCCAAAATGAAAGACAAACAGGATTGTTTCTG...TTTTTGCAAAGATAGGCAAAAAGGATTGAATCCATACCAGAACACGTAGACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS TCA 90 bp AGCATGCAAGGGGGCACTGTCACCAACTCACTTGTCAAAAATAAATaGATAGAGTGCATTGGCGATGCATTTATTCATTATCTATTTGAC +
Preference number: 5 (lower is better)
Translates to: SMQGGTVTNSLVKNK*IECIGDAFIHYLFD
Trigger: GTCAAATAGATAATGAATAAATGCATCGCCAATGCACTCTATTCATTTATTTTTGACAAGTGAGTTGGTGACAGTGCCCCCTTGCATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS TCA 90 bp AGGACAAATAAAAAGGCCTATTTCACCCTGAGAAGAGTAAACTTATaGAACATCTTTTTCCAAGATGTAAGGCACGATAAAGGTGAACAT +
Preference number: 5 (lower is better)
Translates to: RTNKKAYFTLRRVNL*NIFFQDVRHDKGEH
Trigger: ATGTTCACCTTTATCGTGCCTTACATCTTGGAAAAAGATGTTTCATAAGTTTACTCTTCTCAGGGTGAAATAGGCCTTTTTATTTGTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS GCA 72 bp AGGAGGAAGGCTGCATGGACCCAGGGCGGCGGTGGCTaGCTGGCCATCCTCGGCACCTGGCCCTGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: RRKAAWTQGGGG*LAILGTWPCSL
Trigger: CAGGGAGCAGGGCCAGGTGCCGAGGATGGCCAGGCAGCCACCGCCGCCCTGGGTCCATGCAGCCTTCCTCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000493914.5
ENST00000504476.5
ENST00000505079.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS TCA 72 bp GGTTGCCTTCATTCGGGGGTGCTGGTGACTCCTCTGTaGCGGCTTCCCCAGAGCCCACCTGCGTCCTGGCGC +
Preference number: 6 (lower is better)
Translates to: GCLHSGVLVTPL*RLPQSPPASWR
Trigger: GCGCCAGGACGCAGGTGGGCTCTGGGGAAGCCGTCACAGAGGAGTCACCAGCACCCCCGAATGAAGGCAACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495396.5
CDS GCA 72 bp GGACCCCGGAGGCGATGCATTCCAGCAGGAGGTCCATaGCACGAAGCACCATCTGGCTGCTCGCGGTGCCCT +
Preference number: 6 (lower is better)
Translates to: GPRRRCIPAGGP*HEAPSGCSRCP
Trigger: AGGGCACCGCGAGCAGCCAGATGGTGCTTCGTGGCATGGACCTCCTGCTGGAATGCATCGCCTCCGGGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS TCA 72 bp ACCTACCTTCATTCGGGGGTGCTGGTGACTCCTCTGTaGCGGCTTCCCCAGAGCCCACCTGCGTCCTGGCGC +
Preference number: 6 (lower is better)
Translates to: TYLHSGVLVTPL*RLPQSPPASWR
Trigger: GCGCCAGGACGCAGGTGGGCTCTGGGGAAGCCGTCACAGAGGAGTCACCAGCACCCCCGAATGAAGGTAGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS TCA 72 bp CTGTGGAAGGAGCCCCATGCTAGGAGACTGGAGCCCTaGGCCTCGGAGGGTCTGCCTCTAGCCACCAGGTGG +
Preference number: 6 (lower is better)
Translates to: LWKEPHARRLEP*ASEGLPLATRW
Trigger: CCACCTGGTGGCTAGAGGCAGACCCTCCGAGGCTCAGGGCTCCAGTCTCCTAGCATGGGGCTCCTTCCACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514644.5
CDS GCA 72 bp AAGTGGACGTGCCCCACCCTGCAAGCCCACGCCTCTTaGACATCTCACCTGGGTACTTGCCGCCGCGACTCC +
Preference number: 6 (lower is better)
Translates to: KWTCPTLQAHAS*TSHLGTCRRDS
Trigger: GGAGTCGCGGCGGCAAGTACCCAGGTGAGATGTGCAAGAGGCGTGGGCTTGCAGGGTGGGGCACGTCCACTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS GCA 72 bp GGAGGCGGGCCAGGAGGGGATGGGGAGCATGGGCGATaGGCAGTACCGGATTCGTGTATCTTAGTCCCGGAG +
Preference number: 6 (lower is better)
Translates to: GGGPGGDGEHGR*AVPDSCILVPE
Trigger: CTCCGGGACTAAGATACACGAATCCGGTACTGCGCATCGCCCATGCTCCCCATCCCCTCCTGGCCCGCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS GCA 72 bp ACACCCCGGAGGCGATGCATTCCAGCAGGAGGTCCATaGCACGAAGCACCATCTGGCTGCTCGCGGTGCCCT +
Preference number: 6 (lower is better)
Translates to: TPRRRCIPAGGP*HEAPSGCSRCP
Trigger: AGGGCACCGCGAGCAGCCAGATGGTGCTTCGTGGCATGGACCTCCTGCTGGAATGCATCGCCTCCGGGGTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS TCA 72 bp GTGAGTCCGGAGCTGGCTTCCTCACTCGGTACTCTCTaGGCTGGCCCTGGACCGTGTCGGAGTAGACGCGGT +
Preference number: 6 (lower is better)
Translates to: VSPELASSLGTL*AGPGPCRSRRG
Trigger: ACCGCGTCTACTCCGACACGGTCCAGGGCCAGCTCAGAGAGTACCGAGTGAGGAAGCCAGCTCCGGACTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471392.1
CDS GCA 72 bp GATGTGGGGCTGGGGCTGTGCCTTCTGCTCACTCCATaGCACTTCCAGGCTACTCCACACAGGGTGACCCCC +
Preference number: 6 (lower is better)
Translates to: DVGLGLCLLLTP*HFQATPHRVTP
Trigger: GGGGGTCACCCTGTGTGGAGTAGCCTGGAAGTGGCATGGAGTGAGCAGAAGGCACAGCCCCAGCCCCACATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503221.1
CDS CAA 72 bp AAAGTGGACGTGCCCCACCCTGCAAGCCCACGCCTCTaGCACATCTCACCTGGGTACTTGCCGCCGCGACTC +
Preference number: 6 (lower is better)
Translates to: KVDVPHPASPRL*HISPGYLPPRL
Trigger: GAGTCGCGGCGGCAAGTACCCAGGTGAGATGTGCAAGAGGCGTGGGCTTGCAGGGTGGGGCACGTCCACTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS CAA 90 bp ACTCACGGGAAAGTGGACGTGCCCCACCCTGCAAGCCCACGCCTCTaGCACATCTCACCTGGGTACTTGCCGCCGCGACTCCTCTTGATG +
Preference number: 6 (lower is better)
Translates to: THGKVDVPHPASPRL*HISPGYLPPRLLLM
Trigger: CATCAAGAGGAGTCGCGGCGGCAAGTACCCAGGTGAGATGTGCAAGAGGCGTGGGCTTGCAGGGTGGGGCACGTCCACTTTCCCGTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS CAA 90 bp GGGAGCCGGCAAGCTACCCATCAGGGAGTGCAGGCCGTGGCCACGTaGCAAAAACCTGCTATGAGAACACCTTCGCAGGCCTGCACAGGC +
Preference number: 6 (lower is better)
Translates to: GSRQATHQGVQAVAT*QKPAMRTPSQACTG
Trigger: GCCTGTGCAGGCCTGCGAAGGTGTTCTCATAGCAGGTTTTTGCAACGTGGCCACGGCCTGCACTCCCTGATGGGTAGCTTGCCGGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503221.1
CDS GCA 72 bp GATATTCCCCCTCATATTCCTCCGGCCGCCCGCCACTaGGGAAGTCAATCACCAGGGTCCCAGACCTCCTCC +
Preference number: 6 (lower is better)
Translates to: DIPPHIPPAARH*GSQSPGSQTSS
Trigger: GGAGGAGGTCTGGGACCCTGGTGATTGACTTCCGCAGTGGCGGGCGGCCGGAGGAATATGAGGGGGAATATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000505079.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS GCA 72 bp GAGGGGCTGCAAACCGCACATACACCCCGGAGGCGATaGATTCCAGCAGGAGGTCCATGCCACGAAGCACCA +
Preference number: 6 (lower is better)
Translates to: EGLQTAHTPRRR*IPAGGPCHEAP
Trigger: TGGTGCTTCGTGGCATGGACCTCCTGCTGGAATGCATCGCCTCCGGGGTGTATGTGCGGTTTGCAGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS CAA 72 bp CTGAGCAGTGCGAGATCTACTCCAGAGCAGCTTGTGTaGGGATCCCAGAGGCCACTGTGTGGCCCCCAGGGC +
Preference number: 6 (lower is better)
Translates to: LSSARSTPEQLV*GSQRPLCGPQG
Trigger: GCCCTGGGGGCCACACAGTGGCCTCTGGGATCCCAACACAAGCTGCTCTGGAGTAGATCTCGCACTGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS CAA 90 bp GTCCCAGACCTCCTCCTCATGGACACCCGGGGGTCCTTGGCGATGTaGAAGAATCTGCTGTTTCGTGTCCAGTGGAAGCTGGGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: VPDLLLMDTRGSLAM*KNLLFRVQWKLGAG
Trigger: CCCTGCCCCCAGCTTCCACTGGACACGAAACAGCAGATTCTTCAACATCGCCAAGGACCCCCGGGTGTCCATGAGGAGGAGGTCTGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000505079.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS TCA 72 bp GACAGGGCCGTGCCAAATTTGTTGCGGGCGAAGCACTaGTATTCCCCCTCATATTCCTCCGGCCGCCCGCCA +
Preference number: 6 (lower is better)
Translates to: DRAVPNLLRAKH*YSPSYSSGRPP
Trigger: TGGCGGGCGGCCGGAGGAATATGAGGGGGAATATCAGTGCTTCGCCCGCAACAAATTTGGCACGGCCCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000505079.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS TCA 72 bp AGTCCAGCCGCGTCCGGTTGTAAAGAATCACTCGAATaGGCTGGTTCCGGGGCGACAGCATCCGAGGCGGCA +
Preference number: 6 (lower is better)
Translates to: SPAASGCKESLE*AGSGATASEAA
Trigger: TGCCGCCTCGGATGCTGTCGCCCCGGAACCAGCTCATTCGAGTGATTCTTTACAACCGGACGCGGCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS TCA 72 bp AGTGCCAGGGTGAGCATGGGCAGTTACCTAGCACGGTaGGGTAGGCCTTGGCCAGGTCTTGGTCTAGCTCGG +
Preference number: 6 (lower is better)
Translates to: SARVSMGSYLAR*GRPWPGLGLAR
Trigger: CCGAGCTAGACCAAGACCTGGCCAAGGCCTACCTCACCGTGCTAGGTAACTGCCCATGCTCACCCTGGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403080.5
ENST00000680427.1
CDS TCA 72 bp CTCCTCACGCTGTCTTCCTTCTGGAGTGCTCGGCTCTaGGCTGACTGCCTGACATGTAGCTGGAGGCGGTCC +
Preference number: 6 (lower is better)
Translates to: LLTLSSFWSARL*ADCLTCSWRRS
Trigger: GGACCGCCTCCAGCTACATGTCAGGCAGTCAGCTCAGAGCCGAGCACTCCAGAAGGAAGACAGCGTGAGGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS TCA 72 bp GAGTGCAGGCCGTGGCCACGTTGCAAAAACCTGCTATaGGAACACCTTCGCAGGCCTGCACAGGCACACGGC +
Preference number: 6 (lower is better)
Translates to: ECRPWPRCKNLL*EHLRRPAQAHG
Trigger: GCCGTGTGCCTGTGCAGGCCTGCGAAGGTGTTCTCATAGCAGGTTTTTGCAACGTGGCCACGGCCTGCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503221.1
CDS CCA 72 bp AGCACTCGGGGTCTTGTCACCTCGAGCCGCTTTAACTaGGCCTCCTGGACAGCACTCAGCAGCCTGCTTCAG +
Preference number: 6 (lower is better)
Translates to: STRGLVTSSRFN*ASWTALSSLLQ
Trigger: CTGAAGCAGGCTGCTGAGTGCTGTCCAGGAGGCCCAGTTAAAGCGGCTCGAGGTGACAAGACCCCGAGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505079.5
CDS CCA 72 bp TGGGCCTGGGCCAGGCCACGGGACCTGACCCTTCTGTaGAAAGCACCAGACACGATGACTTGTCAGCTTCCA +
Preference number: 6 (lower is better)
Translates to: WAWARPRDLTLL*KAPDTMTCQLP
Trigger: TGGAAGCTGACAAGTCATCGTGTCTGGTGCTTTCCACAGAAGGGTCAGGTCCCGTGGCCTGGCCCAGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CCA 72 bp TCTCCTGCCTCAGCGCTGGTCTACTGGCTAGAGTGGTaGGCTGGGGAAGGATGTGGGCAGCTTGTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: SPASALVYWLEW*AGEGCGQLVKL
Trigger: CAGCTTCACAAGCTGCCCACATCCTTCCCCAGCCCACCACTCTAGCCAGTAGACCAGCGCTGAGGCAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CCA 72 bp CCCTGCCCTAATAAACTTCCCGAGTGCCCAGGGGCTTaGGAGAGTGCAGAAGAGCACAGCAGGAGGGAGAGC +
Preference number: 6 (lower is better)
Translates to: PCPNKLPECPGA*ESAEEHSRRES
Trigger: GCTCTCCCTCCTGCTGTGCTCTTCTGCACTCTCCCAAGCCCCTGGGCACTCGGGAAGTTTATTAGGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CAA 90 bp CCCCACCCTGCAAGCCCACGCCTCTTGCACATCTCACCTGGGTACTaGCCGCCGCGACTCCTCTTGATGAAACAGACGATGAGCAGGATC +
Preference number: 6 (lower is better)
Translates to: PHPASPRLLHISPGY*PPRLLLMKQTMSRI
Trigger: GATCCTGCTCATCGTCTGTTTCATCAAGAGGAGTCGCGGCGGCAAGTACCCAGGTGAGATGTGCAAGAGGCGTGGGCTTGCAGGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS TCA 72 bp GCACCATCTGGCTGCTCGCGGTGCCCTGGGGATACATaGAGCTTGGTGTTCTTTCTGCAACTCCTCGGGTGG +
Preference number: 6 (lower is better)
Translates to: APSGCSRCPGDT*SLVFFLQLLGW
Trigger: CCACCCGAGGAGTTGCAGAAAGAACACCAAGCTTCATGTATCCCCAGGGCACCGCGAGCAGCCAGATGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000504149.1
ENST00000512826.5
CDS TCA 72 bp GCACCATCTGGCTGCTCGCGGTGCCCTGGGGATACATaGAGCTTGGTGTTCTTTCTGCAACTCCTCGGGCAC +
Preference number: 6 (lower is better)
Translates to: APSGCSRCPGDT*SLVFFLQLLGH
Trigger: GTGCCCGAGGAGTTGCAGAAAGAACACCAAGCTTCATGTATCCCCAGGGCACCGCGAGCAGCCAGATGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430393.7
ENST00000504476.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS GCA 72 bp TCAGGGAGTGCAGGCCGTGGCCACGTTGCAAAAACCTaGTATGAGAACACCTTCGCAGGCCTGCACAGGCAC +
Preference number: 6 (lower is better)
Translates to: SGSAGRGHVAKT*YENTFAGLHRH
Trigger: GTGCCTGTGCAGGCCTGCGAAGGTGTTCTCATAGCAGGTTTTTGCAACGTGGCCACGGCCTGCACTCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503221.1
CDS CCA 72 bp AGCACTCGGGGTCTTGTCACCTCGAGCCGCTTTAACTaGGCCTCCTGGACAGCACTCAGCTTCTCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: STRGLVTSSRFN*ASWTALSFSAS
Trigger: TGAGGCAGAGAAGCTGAGTGCTGTCCAGGAGGCCCAGTTAAAGCGGCTCGAGGTGACAAGACCCCGAGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000493914.5
ENST00000513543.6
ENST00000514644.5
ENST00000680427.1
CDS CCA 72 bp GGCAGTTACACTGTTGTCCTGCTGAGCGCCCACCTCTaGAACTCTCTCATGTGGGTGCTGCTTCTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: GSYTVVLLSAHL*NSLMWVLLLPR
Trigger: CCTGGGCAGAAGCAGCACCCACATGAGAGAGTTCCAGAGGTGGGCGCTCAGCAGGACAACAGTGTAACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS CAA 72 bp GCGCCCTCTTGGACCACGACAGGGTCTAGGTTTTCCTaGGGCCACAGAGGAGATTTAGACACCTGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: APSWTTTGSRFS*GHRGDLDTCRR
Trigger: CCGCCTGCAGGTGTCTAAATCTCCTCTGTGGCCCAAGGAAAACCTAGACCCTGTCGTGGTCCAAGAGGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CAA 72 bp CTCACCGAGATCGTGTGCCGGATGCTGCCCATCTTGTaGGAGGCCAGGCAGAAATACTCCCCGGAGTCTTCC +
Preference number: 6 (lower is better)
Translates to: LTEIVCRMLPIL*EARQKYSPESS
Trigger: GGAAGACTCCGGGGAGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CAA 72 bp TTGCACATAAGTCAATCAACCCCTCCCTCGGCCGGCTaGCTCACTCGCTCACCGCTGGGTCTCCCTCATGCA +
Preference number: 6 (lower is better)
Translates to: LHISQSTPPSAG*LTRSPLGLPHA
Trigger: TGCATGAGGGAGACCCAGCGGTGAGCGAGTGAGCAAGCCGGCCGAGGGAGGGGTTGATTGACTTATGTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493914.5
CDS CAA 90 bp ATCACCAGGGTCCCAGACCTCCTCCTCATGGACACCCGGGGGTCCTaGGCGATGTTGAAGAATCTGCTGTTTCGTGTCCAGTGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: ITRVPDLLLMDTRGS*AMLKNLLFRVQWKL
Trigger: CAGCTTCCACTGGACACGAAACAGCAGATTCTTCAACATCGCCAAGGACCCCCGGGTGTCCATGAGGAGGAGGTCTGGGACCCTGGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000505079.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CAA 90 bp GCAGCCTTTACTCTCACCGAGATCGTGTGCCGGATGCTGCCCATCTaGTTGGAGGCCAGGCAGAAATACTCCCCGGAGTCTTCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: AAFTLTEIVCRMLPI*LEARQKYSPESSSE
Trigger: CTCTGAGGAAGACTCCGGGGAGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGAGAGTAAAGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CAA 90 bp CCGGGCCCGAAATTGTGCTTCCAGGTGATGTTGGCCCATTTACTGTaGGGGAGCACCGTGACGTTCCATATGGACTGCTCATCAGGGGCG +
Preference number: 6 (lower is better)
Translates to: PGPKLCFQVMLAHLL*GSTVTFHMDCSSGA
Trigger: CGCCCCTGATGAGCAGTCCATATGGAACGTCACGGTGCTCCCCAACAGTAAATGGGCCAACATCACCTGGAAGCACAATTTCGGGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339876.11
ENST00000401399.5
CDS TCA 72 bp GGGGGTCCACGATGTGATCCTTCGCTGACTGCTTGGTaGTGGTTGGCGGCTGCGTCAGCTCATTCTGAATGC +
Preference number: 6 (lower is better)
Translates to: GGPRCDPSLTAW*WLAAASAHSEC
Trigger: GCATTCAGAATGAGCTGACGCAGCCGCCAACCATCACCAAGCAGTCAGCGAAGGATCACATCGTGGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000504476.5
ENST00000505079.5
CDS TCA 72 bp GATGTTATCACGGGGGTCCACGATGTGATCCTTCGCTaGCTGCTTGGTGATGGTTGGCGGCTGCGTCAGCTC +
Preference number: 6 (lower is better)
Translates to: DVITGVHDVILR*LLGDGWRLRQL
Trigger: GAGCTGACGCAGCCGCCAACCATCACCAAGCAGTCAGCGAAGGATCACATCGTGGACCCCCGTGATAACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000504476.5
ENST00000505079.5
CDS TCA 72 bp GCACCATCTGGCTGCTCGCGGTGCCCTGGGGATACATaGAGCTTGGTGTTCTTTCTGCAACTCCTCGGGATG +
Preference number: 6 (lower is better)
Translates to: APSGCSRCPGDT*SLVFFLQLLGM
Trigger: CATCCCGAGGAGTTGCAGAAAGAACACCAAGCTTCATGTATCCCCAGGGCACCGCGAGCAGCCAGATGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS TCA 72 bp TACCCCTGGCCCTGGTTAGTGAGCTGGGTAGTTAGGTaGGTCCGGAGCTGGCTTCCTCACTCGGTACTCTCT +
Preference number: 6 (lower is better)
Translates to: YPWPWLVSWVVR*VRSWLPHSVLS
Trigger: AGAGAGTACCGAGTGAGGAAGCCAGCTCCGGACTCACCTAACTACCCAGCTCACTAACCAGGGCCAGGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471392.1
CDS GCA 72 bp CGGGTGGTGAGGACCTTGAGGGTGAAAGGGTTCTTCTaGTGGATGGTGTGGGTGAAGTGGAAGCGGGCGTTA +
Preference number: 6 (lower is better)
Translates to: RVVRTLRVKGFF*WMVWVKWKRAL
Trigger: TAACGCCCGCTTCCACTTCACCCACACCATCCAGCAGAAGAACCCTTTCACCCTCAAGGTCCTCACCACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000504149.1
ENST00000512826.5
CDS GCA 72 bp GAAGCCTGGGAGAACCGTGAGACGACCGGAGCCCATTaGCCCATCCAGGATGCTATTTCCTTCAGGTCTGAG +
Preference number: 6 (lower is better)
Translates to: EAWENRETTGAH*PIQDAISFRSE
Trigger: CTCAGACCTGAAGGAAATAGCATCCTGGATGGGGCAATGGGCTCCGGTCGTCTCACGGTTCTCCCAGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495396.5
CDS GCA 72 bp CCAGAGGGTGTGCCAGTATTGAGGCTTTTGCAGCCTTaGCTCCTCGAGAGGTCCCAGACTGCACATTCCCCT +
Preference number: 6 (lower is better)
Translates to: PEGVPVLRLLQP*LLERSQTAHSP
Trigger: AGGGGAATGTGCAGTCTGGGACCTCTCGAGGAGGCAAGGCTGCAAAAGCCTCAATACTGGCACACCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CCA 72 bp GGTCTTGTCACCTCGAGCCGCTTTAACTGGGCCTCCTaGACAGCACTCAGCTTCTCTGCCTCATTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: GLVTSSRFNWAS*TALSFSASFSL
Trigger: GAGGCTGAATGAGGCAGAGAAGCTGAGTGCTGTCCAGGAGGCCCAGTTAAAGCGGCTCGAGGTGACAAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000493914.5
ENST00000513543.6
ENST00000514644.5
ENST00000680427.1
CDS CCA 72 bp TCACCGAGATCGTGTGCCGGATGCTGCCCATCTTGTTaGAGGCCAGGCAGAAATACTCCCCGGAGTCTTCCT +
Preference number: 6 (lower is better)
Translates to: SPRSCAGCCPSC*RPGRNTPRSLP
Trigger: AGGAAGACTCCGGGGAGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 72 bp GGAACAGTGCATTCTCGTGGCTCAGCGTACCAGCCCTaGGATCGATTCTTACCAGGGGCTCTGAGAATGCCC +
Preference number: 6 (lower is better)
Translates to: GTVHSRGSAYQP*DRFLPGALRMP
Trigger: GGGCATTCTCAGAGCCCCTGGTAAGAATCGATCCCAGGGCTGGTACGCTGAGCCACGAGAATGCACTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS CCA 72 bp ACAGCAGGAGGGAGAGCTGGTTGTGTGACTCACTCCTaGTTTCTGAGACCAGAGAGGGATGCAGAGCGGGCT +
Preference number: 6 (lower is better)
Translates to: TAGGRAGCVTHS*FLRPERDAERA
Trigger: AGCCCGCTCTGCATCCCTCTCTGGTCTCAGAAACCAGGAGTGAGTCACACAACCAGCTCTCCCTCCTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CAA 72 bp GTCCCAGACCTCCTCCTCATGGACACCCGGGGGTCCTaGGCGATGTTGAAGAATCTGCTGTTTCGTGTCCAG +
Preference number: 6 (lower is better)
Translates to: VPDLLLMDTRGS*AMLKNLLFRVQ
Trigger: CTGGACACGAAACAGCAGATTCTTCAACATCGCCAAGGACCCCCGGGTGTCCATGAGGAGGAGGTCTGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000505079.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CAA 72 bp ACTCTCACCGAGATCGTGTGCCGGATGCTGCCCATCTaGTTGGAGGCCAGGCAGAAATACTCCCCGGAGTCT +
Preference number: 6 (lower is better)
Translates to: TLTEIVCRMLPI*LEARQKYSPES
Trigger: AGACTCCGGGGAGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CAA 72 bp GCAAGCCCACGCCTCTTGCACATCTCACCTGGGTACTaGCCGCCGCGACTCCTCTTGATGAAACAGACGATG +
Preference number: 6 (lower is better)
Translates to: ASPRLLHISPGY*PPRLLLMKQTM
Trigger: CATCGTCTGTTTCATCAAGAGGAGTCGCGGCGGCAAGTACCCAGGTGAGATGTGCAAGAGGCGTGGGCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS CAA 72 bp AGGCTGCGGAGGGAAGGTAAACTCCAGCGTCCCAAATaGCACATAAGTCAATCAACCCCTCCCTCGGCCGGC +
Preference number: 6 (lower is better)
Translates to: RLRREGKLQRPK*HISQSTPPSAG
Trigger: GCCGGCCGAGGGAGGGGTTGATTGACTTATGTGCAATTTGGGACGCTGGAGTTTACCTTCCCTCCGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493914.5
CDS CAA 72 bp CAAGCTACCCATCAGGGAGTGCAGGCCGTGGCCACGTaGCAAAAACCTGCTATGAGAACACCTTCGCAGGCC +
Preference number: 6 (lower is better)
Translates to: QATHQGVQAVAT*QKPAMRTPSQA
Trigger: GGCCTGCGAAGGTGTTCTCATAGCAGGTTTTTGCAACGTGGCCACGGCCTGCACTCCCTGATGGGTAGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503221.1
CDS CAA 72 bp CAGCCTTTCCCAGAGGGTGTGCCAGTATTGAGGCTTTaGCAGCCTTGCCTCCTCGAGAGGTCCCAGACTGCA +
Preference number: 6 (lower is better)
Translates to: QPFPEGVPVLRL*QPCLLERSQTA
Trigger: TGCAGTCTGGGACCTCTCGAGGAGGCAAGGCTGCAAAAGCCTCAATACTGGCACACCCTCTGGGAAAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CAA 90 bp GCCTTTACTCTCACCGAGATCGTGTGCCGGATGCTGCCCATCTTGTaGGAGGCCAGGCAGAAATACTCCCCGGAGTCTTCCTCAGAGACA +
Preference number: 6 (lower is better)
Translates to: AFTLTEIVCRMLPIL*EARQKYSPESSSET
Trigger: TGTCTCTGAGGAAGACTCCGGGGAGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGAGAGTAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CAA 90 bp CCGGGCCCGAAATTGTGCTTCCAGGTGATGTTGGCCCATTTACTGTaGGGGAGCACCGTGACGTTCCATATGGACTGCTCATCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: PGPKLCFQVMLAHLL*GSTVTFHMDCSSGA
Trigger: AGCCCCTGATGAGCAGTCCATATGGAACGTCACGGTGCTCCCCAACAGTAAATGGGCCAACATCACCTGGAAGCACAATTTCGGGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413225.5
CDS TCA 72 bp TCCTCCTCATGGACACCCGGGGGTCCTTGGCGATGTTaGAGAATCTGCTGTTTCGTGTCCAGTGGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: SSSWTPGGPWRC*RICCFVSSGSW
Trigger: CCAGCTTCCACTGGACACGAAACAGCAGATTCTTCAACATCGCCAAGGACCCCCGGGTGTCCATGAGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000505079.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS TCA 72 bp GATGTTATCACGGGGGTCCACGATGTGATCCTTCGCTaGCTGCTTGGTGATGGTTGGCGGCTGCGTCAGATC +
Preference number: 6 (lower is better)
Translates to: DVITGVHDVILR*LLGDGWRLRQI
Trigger: GATCTGACGCAGCCGCCAACCATCACCAAGCAGTCAGCGAAGGATCACATCGTGGACCCCCGTGATAACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS TCA 72 bp CCTCCAGTAGTAGGCAATCTTCTCCGGAGTAACCGATaGCGGACTCTGGCTCAGGGCCCTTCCCGAAGTCAT +
Preference number: 6 (lower is better)
Translates to: PPVVGNLLRSNR*RTLAQGPSRSH
Trigger: ATGACTTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATCGGTTACTCCGGAGAAGATTGCCTACTACTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS TCA 72 bp AAACGCCTAGGGGCAAATCTTCTCCGGAGTAACCGATaGCGGACTCTGGCTCAGGGCCCTTCCCGAAGTCAT +
Preference number: 6 (lower is better)
Translates to: KRLGANLLRSNR*RTLAQGPSRSH
Trigger: ATGACTTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATCGGTTACTCCGGAGAAGATTTGCCCCTAGGCGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468328.5
CDS TCA 72 bp TCTCATCACTGGGTCCAGGCAGCAGGCCCAGGCTTCTaGGCTGAGAATGTTGGGTTCAGGGGTAAGGAGACA +
Preference number: 6 (lower is better)
Translates to: SHHWVQAAGPGF*AENVGFRGKET
Trigger: TGTCTCCTTACCCCTGAACCCAACATTCTCAGCTCAGAAGCCTGGGCCTGCTGCCTGGACCCAGTGATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495396.5
CDS GCA 72 bp CTTATCAGATGGGAGGTCCCCACCTTTCTTGTACCATaGGATGTCTGGTGTTGGGACCCCGGAGGCGATGCA +
Preference number: 6 (lower is better)
Translates to: LIRWEVPTFLVP*DVWCWDPGGDA
Trigger: TGCATCGCCTCCGGGGTCCCAACACCAGACATCGCATGGTACAAGAAAGGTGGGGACCTCCCATCTGATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS GCA 72 bp CAGCCTTTACTCTCACCGAGATCGTGTGCCGGATGCTaGCCATCTTGTTGGAGGCCAGGCAGAAATACTCCC +
Preference number: 6 (lower is better)
Translates to: QPLLSPRSCAGC*PSCWRPGRNTP
Trigger: GGGAGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGAGAGTAAAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS GCA 72 bp CTGAGGGTGGGGACTGGACCAAGTGGAGGCCCAGGATaGCCTGTCATCTTTTCACATCTCTCTAGTGGATCC +
Preference number: 6 (lower is better)
Translates to: LRVGTGPSGGPG*PVIFSHLSSGS
Trigger: GGATCCACTAGAGAGATGTGAAAAGATGACAGGGCATCCTGGGCCTCCACTTGGTCCAGTCCCCACCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503221.1
CDS CCA 72 bp CCGGAAGATGATGGTGTCTCCGGCCACCTCACGGTTTaGGTTAGGTGGTGCCGATTGCAAAGGTTCCCCATT +
Preference number: 6 (lower is better)
Translates to: PEDDGVSGHLTV*VRWCRLQRFPI
Trigger: AATGGGGAACCTTTGCAATCGGCACCACCTAACCCAAACCGTGAGGTGGCCGGAGACACCATCATCTTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 72 bp TGGGATTTTAGGGAAGCCCAAAGTGCTTTAGGGCCATaGGGGTCCCTACCAGTGCCACCCATCTTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: WDFREAQSALGP*GSLPVPPIFSL
Trigger: GAGGCTGAAGATGGGTGGCACTGGTAGGGACCCCCATGGCCCTAAAGCACTTTGGGCTTCCCTAAAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS CCA 72 bp CTGGCTGCTCGCGGTGCCCTGGGGATACATGAAGCTTaGTGTTCTTTCTGCAACTCCTCGGGCACTGTACAT +
Preference number: 6 (lower is better)
Translates to: LAARGALGIHEA*CSFCNSSGTVH
Trigger: ATGTACAGTGCCCGAGGAGTTGCAGAAAGAACACCAAGCTTCATGTATCCCCAGGGCACCGCGAGCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430393.7
ENST00000504476.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 72 bp GGGCAAATCTTCTCCGGAGTAACCGATGACGGACTCTaGCTCAGGGCCCTTCCCGAAGTCATTTTCAGCCTG +
Preference number: 6 (lower is better)
Translates to: GQIFSGVTDDGL*LRALPEVIFSL
Trigger: CAGGCTGAAAATGACTTCGGGAAGGGCCCTGAGCCAGAGTCCGTCATCGGTTACTCCGGAGAAGATTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468328.5
CDS CCA 72 bp GGTCTCCCCGAACTGGAAGAACAGAGCTTCCTGGCCTaGCTGCATGATACAGGAACAGTGCATTCTCGTGGC +
Preference number: 6 (lower is better)
Translates to: GLPELEEQSFLA*LHDTGTVHSRG
Trigger: GCCACGAGAATGCACTGTTCCTGTATCATGCAGCCAGGCCAGGAAGCTCTGTTCTTCCAGTTCGGGGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS CCA 72 bp CGTGGCCCCAAAGAACATCAATCACCAACCCGCTGGTaGCAGCTTCTAATACCCCAGCAGGTTCCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: RGPKEHQSPTRW*QLLIPQQVPPQ
Trigger: CTGAGGAGGAACCTGCTGGGGTATTAGAAGCTGCCACCAGCGGGTTGGTGATTGATGTTCTTTGGGGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS CCA 72 bp CACCGTGGCCCCAAAGAACATCAATCACCAACCCGCTaGTGGCAGCTTCTAATACCCCAGCAGGTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: HRGPKEHQSPTR*WQLLIPQQVPP
Trigger: AGGAGGAACCTGCTGGGGTATTAGAAGCTGCCACCAGCGGGTTGGTGATTGATGTTCTTTGGGGCCACGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS CCA 72 bp CAGAGGGCTGGTCACAGCCTAATGGGGACTGAGGGATaGCCACGGATTGGCCATGGAAGTATGATTCCCCAT +
Preference number: 6 (lower is better)
Translates to: QRAGHSLMGTEG*PRIGHGSMIPH
Trigger: ATGGGGAATCATACTTCCATGGCCAATCCGTGGCCATCCCTCAGTCCCCATTAGGCTGTGACCAGCCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503221.1
CDS CAA 72 bp CTCCTCCTCATGGACACCCGGGGGTCCTTGGCGATGTaGAAGAATCTGCTGTTTCGTGTCCAGTGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: LLLMDTRGSLAM*KNLLFRVQWKL
Trigger: CAGCTTCCACTGGACACGAAACAGCAGATTCTTCAACATCGCCAAGGACCCCCGGGTGTCCATGAGGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000505079.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CAA 72 bp CACATCTCACCTGGGTACTTGCCGCCGCGACTCCTCTaGATGAAACAGACGATGAGCAGGATCAGCACCAGG +
Preference number: 6 (lower is better)
Translates to: HISPGYLPPRLL*MKQTMSRISTR
Trigger: CCTGGTGCTGATCCTGCTCATCGTCTGTTTCATCAAGAGGAGTCGCGGCGGCAAGTACCCAGGTGAGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS CAA 72 bp GTGATCCAGACAGGTGAGGCTGGTCTAAGGAGCCCCTaGGGTTGTCCTTGGTCAGAGAGAAGCCTGGCTGAT +
Preference number: 6 (lower is better)
Translates to: VIQTGEAGLRSP*GCPWSERSLAD
Trigger: ATCAGCCAGGCTTCTCTCTGACCAAGGACAACCCAAGGGGCTCCTTAGACCAGCCTCACCTGTCTGGATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS TCA 72 bp CCACGGATTGGCCATGGAAGTATGATTCCCCATGGATaGGTCCAGGGTGGAGAAATGGGAGCCGGCAAGCTA +
Preference number: 6 (lower is better)
Translates to: PRIGHGSMIPHG*VQGGEMGAGKL
Trigger: TAGCTTGCCGGCTCCCATTTCTCCACCCTGGACTCATCCATGGGGAATCATACTTCCATGGCCAATCCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503221.1
CDS TCA 72 bp GGACTGAGGGATGGCCACGGATTGGCCATGGAAGTATaGTTCCCCATGGATGAGTCCAGGGTGGAGAAATGG +
Preference number: 6 (lower is better)
Translates to: GLRDGHGLAMEV*FPMDESRVEKW
Trigger: CCATTTCTCCACCCTGGACTCATCCATGGGGAATCATACTTCCATGGCCAATCCGTGGCCATCCCTCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503221.1
CDS GCA 72 bp GAGCAGCCTTTACTCTCACCGAGATCGTGTGCCGGATaGTGCCCATCTTGTTGGAGGCCAGGCAGAAATACT +
Preference number: 6 (lower is better)
Translates to: EQPLLSPRSCAG*CPSCWRPGRNT
Trigger: AGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGAGAGTAAAGGCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS GCA 72 bp TGGTTGGTGAGGACCTTGAGGGTGAAAGGGTTCTTCTaGTGGATGGTGTGGGTGAAGTGGAAGCGGGCGTTA +
Preference number: 6 (lower is better)
Translates to: WLVRTLRVKGFF*WMVWVKWKRAL
Trigger: TAACGCCCGCTTCCACTTCACCCACACCATCCAGCAGAAGAACCCTTTCACCCTCAAGGTCCTCACCAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS GCA 72 bp GCCAGATGGGAAGGAGAAGATGAGACAGGTGACCCCTaGTGTGGAAGGCCTGATCTCCTGGAACTTACCATC +
Preference number: 6 (lower is better)
Translates to: ARWEGEDETGDP*CGRPDLLELTI
Trigger: GATGGTAAGTTCCAGGAGATCAGGCCTTCCACAGCAGGGGTCACCTGTCTCATCTTCTCCTTCCCATCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514644.5
CDS CCA 72 bp GTGGTGAGGACCTTGAGGGTGAAAGGGTTCTTCTGCTaGATGGTGTGGGTGAAGTGGAAGCGGGCGTTACAA +
Preference number: 6 (lower is better)
Translates to: VVRTLRVKGFFC*MVWVKWKRALQ
Trigger: TTGTAACGCCCGCTTCCACTTCACCCACACCATCCAGCAGAAGAACCCTTTCACCCTCAAGGTCCTCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000504149.1
ENST00000512826.5
CDS CCA 72 bp ATGCCACGAAGCACCATCTGGCTGCTCGCGGTGCCCTaGGGATACATGAAGCTTGGTGTTCTTTCTGCAACT +
Preference number: 6 (lower is better)
Translates to: MPRSTIWLLAVP*GYMKLGVLSAT
Trigger: AGTTGCAGAAAGAACACCAAGCTTCATGTATCCCCAGGGCACCGCGAGCAGCCAGATGGTGCTTCGTGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504149.1
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 72 bp AGGTGGTGCCCACTGGGTCCTACAATTCTACAACTGTaGCAGAAGAGTTCTGGGTGCTTCCTGGCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: RWCPLGPTILQL*QKSSGCFLAAS
Trigger: TGAGGCAGCCAGGAAGCACCCAGAACTCTTCTGCCACAGTTGTAGAATTGTAGGACCCAGTGGGCACCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS CCA 72 bp CCATGGAAGTATGATTCCCCATGGATGAGTCCAGGGTaGAGAAATGGGAGCCGGCAAGCTACCCATCAGGGA +
Preference number: 6 (lower is better)
Translates to: PWKYDSPWMSPG*RNGSRQATHQG
Trigger: TCCCTGATGGGTAGCTTGCCGGCTCCCATTTCTCCACCCTGGACTCATCCATGGGGAATCATACTTCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503221.1
CDS CCA 72 bp ATGGCCACGGATTGGCCATGGAAGTATGATTCCCCATaGATGAGTCCAGGGTGGAGAAATGGGAGCCGGCAA +
Preference number: 6 (lower is better)
Translates to: MATDWPWKYDSP*MSPGWRNGSRQ
Trigger: TTGCCGGCTCCCATTTCTCCACCCTGGACTCATCCATGGGGAATCATACTTCCATGGCCAATCCGTGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503221.1
CDS CCA 72 bp TGGGAGAGTGCAGAAGAGCACAGCAGGAGGGAGAGCTaGTTGTGTGACTCACTCCTGGTTTCTGAGACCAGA +
Preference number: 6 (lower is better)
Translates to: WESAEEHSRRES*LCDSLLVSETR
Trigger: TCTGGTCTCAGAAACCAGGAGTGAGTCACACAACCAGCTCTCCCTCCTGCTGTGCTCTTCTGCACTCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CAA 72 bp AGGCTGCGGAGGGAAGGTAAACTCCAGCGTCCCAAATaGCACATAAGTCAATCAACCTCCAAGGGCTCGGGC +
Preference number: 6 (lower is better)
Translates to: RLRREGKLQRPK*HISQSTSKGSG
Trigger: GCCCGAGCCCTTGGAGGTTGATTGACTTATGTGCAATTTGGGACGCTGGAGTTTACCTTCCCTCCGCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339876.11
ENST00000403080.5
ENST00000404977.6
ENST00000430393.7
ENST00000513543.6
ENST00000680427.1
CDS CAA 72 bp CACAGAGGAGATTTAGACACCTGCAGGCGGATCCTATaGGACAGGGCCGTGCCAAATTTGTTGCGGGCGAAG +
Preference number: 6 (lower is better)
Translates to: HRGDLDTCRRIL*DRAVPNLLRAK
Trigger: CTTCGCCCGCAACAAATTTGGCACGGCCCTGTCCAATAGGATCCGCCTGCAGGTGTCTAAATCTCCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CAA 72 bp TCAGTTCCGGGCCCGAAATTGTGCTTCCAGGTGATGTaGGCCCATTTACTGTTGGGGAGCACCGTGACGTTC +
Preference number: 6 (lower is better)
Translates to: SVPGPKLCFQVM*AHLLLGSTVTF
Trigger: GAACGTCACGGTGCTCCCCAACAGTAAATGGGCCAACATCACCTGGAAGCACAATTTCGGGCCCGGAACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000413225.5
CDS CAA 72 bp GCTCGCTGGCAGTCTGAAGATGCACAGGCAAGAGGATaGTATTTCCAATCCGGGCAAGGGCTGGCTTCACTG +
Preference number: 6 (lower is better)
Translates to: ARWQSEDAQARG*YFQSGQGLASL
Trigger: CAGTGAAGCCAGCCCTTGCCCGGATTGGAAATACAATCCTCTTGCCTGTGCATCTTCAGACTGCCAGCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS CAA 72 bp GAAGTACAGGTGCTAAGGAGTCACCTGAGGGTGTCCTaGATGACCCAATGGCTGGGTTTGGGTTTGGGAGGG +
Preference number: 6 (lower is better)
Translates to: EVQVLRSHLRVS*MTQWLGLGLGG
Trigger: CCCTCCCAAACCCAAACCCAGCCATTGGGTCATCAAGGACACCCTCAGGTGACTCCTTAGCACCTGTACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503221.1
CDS CAA 90 bp AGGAGAATGGTGATCCAGACAGGTGAGGCTGGTCTAAGGAGCCCCTaGGGTTGTCCTTGGTCAGAGAGAAGCCTGGCTGATAGGTCTAAC +
Preference number: 6 (lower is better)
Translates to: RRMVIQTGEAGLRSP*GCPWSERSLADRSN
Trigger: GTTAGACCTATCAGCCAGGCTTCTCTCTGACCAAGGACAACCCAAGGGGCTCCTTAGACCAGCCTCACCTGTCTGGATCACCATTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS TCA 72 bp TTGCTAGTGGTATTGGCAGTTACACTGTTGTCCTGCTaGGCGCCCACCTCTGGAACTCTCTCATGTGGGTGC +
Preference number: 6 (lower is better)
Translates to: LLVVLAVTLLSC*APTSGTLSCGC
Trigger: GCACCCACATGAGAGAGTTCCAGAGGTGGGCGCTCAGCAGGACAACAGTGTAACTGCCAATACCACTAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS TCA 72 bp TCCTGGCTGCCTCACGCTGATTTTATAGCTGGCCTGTaGGCTCAGGAAGCTACAGACCTTCCCCTTGTTGGT +
Preference number: 6 (lower is better)
Translates to: SWLPHADFIAGL*AQEATDLPLVG
Trigger: ACCAACAAGGGGAAGGTCTGTAGCTTCCTGAGCTCACAGGCCAGCTATAAAATCAGCGTGAGGCAGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS GCA 72 bp GGCGGATCCTATTGGACAGGGCCGTGCCAAATTTGTTaGGGGCGAAGCACTGATATTCCCCCTCATATTCCT +
Preference number: 6 (lower is better)
Translates to: GGSYWTGPCQIC*GRSTDIPPHIP
Trigger: AGGAATATGAGGGGGAATATCAGTGCTTCGCCCGCAACAAATTTGGCACGGCCCTGTCCAATAGGATCCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS GCA 72 bp GGTGCCCTGGGGATACATGAAGCTTGGTGTTCTTTCTaGAACTCCTCGGGCACTGTACATGTCAGGGTGGTT +
Preference number: 6 (lower is better)
Translates to: GALGIHEAWCSF*NSSGTVHVRVV
Trigger: AACCACCCTGACATGTACAGTGCCCGAGGAGTTGCAGAAAGAACACCAAGCTTCATGTATCCCCAGGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430393.7
ENST00000504476.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 72 bp TTGGTGAGGACCTTGAGGGTGAAAGGGTTCTTCTGCTaGATGGTGTGGGTGAAGTGGAAGCGGGCGTTACAA +
Preference number: 6 (lower is better)
Translates to: LVRTLRVKGFFC*MVWVKWKRALQ
Trigger: TTGTAACGCCCGCTTCCACTTCACCCACACCATCCAGCAGAAGAACCCTTTCACCCTCAAGGTCCTCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 72 bp CAGCTTCCAGAGTGCCCACTCACATCACCTCTTCTCTaGAGTCTTCCCGTGAAGACTGAATCCCCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: QLPECPLTSPLL*SLPVKTESPSL
Trigger: CAGAGAAGGGGATTCAGTCTTCACGGGAAGACTCCAGAGAAGAGGTGATGTGAGTGGGCACTCTGGAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CAA 72 bp AAAGGTTCCCCATTCACCATCCACTGGACAGTGGGTTaGGGGTTTCCATTGGCTCGACACACCAGTCTCCCA +
Preference number: 6 (lower is better)
Translates to: KGSPFTIHWTVG*GFPLARHTSLP
Trigger: TGGGAGACTGGTGTGTCGAGCCAATGGAAACCCCAAACCCACTGTCCAGTGGATGGTGAATGGGGAACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CAA 72 bp CCTGACCCTTCTGTGGAAAGCACCAGACACGATGACTaGTCAGCTTCCAGAGTGCCCACTCACATCACCTCT +
Preference number: 6 (lower is better)
Translates to: PDPSVESTRHDD*SASRVPTHITS
Trigger: AGAGGTGATGTGAGTGGGCACTCTGGAAGCTGACAAGTCATCGTGTCTGGTGCTTTCCACAGAAGGGTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CAA 90 bp ACCACAAAGTCAGTTCCGGGCCCGAAATTGTGCTTCCAGGTGATGTaGGCCCATTTACTGTTGGGGAGCACCGTGACGTTCCATATGGAC +
Preference number: 6 (lower is better)
Translates to: TTKSVPGPKLCFQVM*AHLLLGSTVTFHMD
Trigger: GTCCATATGGAACGTCACGGTGCTCCCCAACAGTAAATGGGCCAACATCACCTGGAAGCACAATTTCGGGCCCGGAACTGACTTTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000413225.5
CDS CAA 90 bp GCCTGGACCCAGGTGATGAACTCATTTGCTCTTTGTGAAGCTGGCTaGGCAAATGGCTGTTTCCTAACTCCTCCTCCTCTCTGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: AWTQVMNSFALCEAG*ANGCFLTPPPLCSL
Trigger: CAGGCTGCAGAGAGGAGGAGGAGTTAGGAAACAGCCATTTGCCAAGCCAGCTTCACAAAGAGCAAATGAGTTCATCACCTGGGTCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS TCA 72 bp TACTTGGGCCCAGGAGGATGCATGTCCTCTAAAAGCTaGTCTTTCCTGTGCAGAGGAGGATGCTCAGCCACA +
Preference number: 6 (lower is better)
Translates to: YLGPGGCMSSKS*SFLCRGGCSAT
Trigger: TGTGGCTGAGCATCCTCCTCTGCACAGGAAAGATCAGCTTTTAGAGGACATGCATCCTCCTGGGCCCAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS GCA 72 bp CAAGATGATTTAGAGGTGGGAGCTGGAGGAAGGCATTaGCACAGAGAGATCAGGATGATGACCCGGAAGCAC +
Preference number: 6 (lower is better)
Translates to: QDDLEVGAGGRH*HREIRMMTRKH
Trigger: GTGCTTCCGGGTCATCATCCTGATCTCTCTGTGGCAATGCCTTCCTCCAGCTCCCACCTCTAAATCATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS GCA 72 bp TTGGCAAATGGCTGTTTCCTAACTCCTCCTCCTCTCTaGAGCCTGACAACGCATCCAATTCAGGCTGCAAGG +
Preference number: 6 (lower is better)
Translates to: LANGCFLTPPPL*SLTTHPIQAAR
Trigger: CCTTGCAGCCTGAATTGGATGCGTTGTCAGGCTGCAGAGAGGAGGAGGAGTTAGGAAACAGCCATTTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CCA 72 bp ATTGCAAAGGTTCCCCATTCACCATCCACTGGACAGTaGGTTTGGGGTTTCCATTGGCTCGACACACCAGTC +
Preference number: 6 (lower is better)
Translates to: IAKVPHSPSTGQ*VWGFHWLDTPV
Trigger: GACTGGTGTGTCGAGCCAATGGAAACCCCAAACCCACTGTCCAGTGGATGGTGAATGGGGAACCTTTGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 72 bp AACTGCTCCACCACACTTGACCCTGGACTGCTTTCATaGGCAAGTCAAGACCACAGAGGACGATCCATAGGA +
Preference number: 6 (lower is better)
Translates to: NCSTTLDPGLLS*ASQDHRGRSIG
Trigger: TCCTATGGATCGTCCTCTGTGGTCTTGACTTGCCCATGAAAGCAGTCCAGGGTCAAGTGTGGTGGAGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493914.5
CDS CCA 72 bp GAACAGGGATCTGAAGCTAGAATTTGGGGTACTGAGTaGTGGAGGACCACCCAAGGAGTGTGTGTGTGTCAG +
Preference number: 6 (lower is better)
Translates to: EQGSEARIWGTE*WRTTQGVCVCQ
Trigger: CTGACACACACACACTCCTTGGGTGGTCCTCCACCACTCAGTACCCCAAATTCTAGCTTCAGATCCCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS CCA 72 bp CCTTTCTCCTCTTCTATACAGCTGGGGACACCCAGGTaGCCTAAAAGTATACTTGGGCCCAGGAGGATGCAT +
Preference number: 6 (lower is better)
Translates to: PFSSSIQLGTPR*PKSILGPRRMH
Trigger: ATGCATCCTCCTGGGCCCAAGTATACTTTTAGGCCACCTGGGTGTCCCCAGCTGTATAGAAGAGGAGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS CCA 72 bp AGCTCTGGTGGGGCTGAAATGCTGCCAGATGACGCCTaGACCCAGGTGATGAACTCATTTGCTCTTTGTGAA +
Preference number: 6 (lower is better)
Translates to: SSGGAEMLPDDA*TQVMNSFALCE
Trigger: TTCACAAAGAGCAAATGAGTTCATCACCTGGGTCCAGGCGTCATCTGGCAGCATTTCAGCCCCACCAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CAA 90 bp TTGCTGTCGATGTACTCAACCACAAAGTCAGTTCCGGGCCCGAAATaGTGCTTCCAGGTGATGTTGGCCCATTTACTGTTGGGGAGCACC +
Preference number: 6 (lower is better)
Translates to: LLSMYSTTKSVPGPK*CFQVMLAHLLLGST
Trigger: GGTGCTCCCCAACAGTAAATGGGCCAACATCACCTGGAAGCACAATTTCGGGCCCGGAACTGACTTTGTGGTTGAGTACATCGACAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000413225.5
CDS CAA 90 bp AACTCAAGTGCTCGCTGGCAGTCTGAAGATGCACAGGCAAGAGGATaGTATTTCCAATCCGGGCAAGGGCTGGCTTCACTGAGAGAACAC +
Preference number: 6 (lower is better)
Translates to: NSSARWQSEDAQARG*YFQSGQGLASLREH
Trigger: GTGTTCTCTCAGTGAAGCCAGCCCTTGCCCGGATTGGAAATACAATCCTCTTGCCTGTGCATCTTCAGACTGCCAGCGAGCACTTGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404977.6
CDS CAA 90 bp CACCTCACATTGTGGGTACTCAAGAAATGGCTGTTGAATAGACCATaGTATCTCTGGAGACACACGGGGGTCCCCAGCCTTTCCCAGAGG +
Preference number: 6 (lower is better)
Translates to: HLTLWVLKKWLLNRP*YLWRHTGVPSLSQR
Trigger: CCTCTGGGAAAGGCTGGGGACCCCCGTGTGTCTCCAGAGATACAATGGTCTATTCAACAGCCATTTCTTGAGTACCCACAATGTGAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS TCA 72 bp ATCACGTTGGAGAAGTATAGGTCTCCGTTATGGCCCTaGGAGACACGTTTGTCTTGGGTGATGGGCTCCATG +
Preference number: 6 (lower is better)
Translates to: ITLEKYRSPLWP*ETRLSWVMGSM
Trigger: CATGGAGCCCATCACCCAAGACAAACGTGTCTCTCAGGGCCATAACGGAGACCTATACTTCTCCAACGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS TCA 72 bp CTCACACATAAGATGGGTTCTCACCTTCCGAGGGCTTaGGGACTTGCAAGTCTCATTTCCTCTCCATCCCAG +
Preference number: 6 (lower is better)
Translates to: LTHKMGSHLPRA*GLASLISSPSQ
Trigger: CTGGGATGGAGAGGAAATGAGACTTGCAAGTCCTCAAGCCCTCGGAAGGTGAGAACCCATCTTATGTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS GCA 72 bp TACTCAACCACAAAGTCAGTTCCGGGCCCGAAATTGTaGTTCCAGGTGATGTTGGCCCATTTACTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: YSTTKSVPGPKL*FQVMLAHLLLG
Trigger: CCCCAACAGTAAATGGGCCAACATCACCTGGAAGCACAATTTCGGGCCCGGAACTGACTTTGTGGTTGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000413225.5
CDS GCA 72 bp CAAGTAAGAACTGCTCCACCACACTTGACCCTGGACTaGTTTCATGGGCAAGTCAAGACCACAGAGGACGAT +
Preference number: 6 (lower is better)
Translates to: QVRTAPPHLTLD*FHGQVKTTEDD
Trigger: ATCGTCCTCTGTGGTCTTGACTTGCCCATGAAAGCAGTCCAGGGTCAAGTGTGGTGGAGCAGTTCTTACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493914.5
CDS GCA 72 bp AAGATCTCCTGGTTTTCACTTCAAAGAGGTGCCTTCTaGACTACAACTCTGTCAGGCGTTGGTTGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: KISWFSLQRGAF*TTTLSGVGCPR
Trigger: CCTGGGGCAACCAACGCCTGACAGAGTTGTAGTGCAGAAGGCACCTCTTTGAAGTGAAAACCAGGAGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS GCA 72 bp CACAGTGGTCCAAGGAGAGCTGAGCTCCAGATACAATaGCAGCACCTACCTCTCACACATAAGATGGGTTCT +
Preference number: 6 (lower is better)
Translates to: HSGPRRAELQIQ*QHLPLTHKMGS
Trigger: AGAACCCATCTTATGTGTGAGAGGTAGGTGCTGGCATTGTATCTGGAGCTCAGCTCTCCTTGGACCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CCA 72 bp AACTGTAGTCGGTCTGCATGTCCTGCAGCATCACGTTaGAGAAGTATAGGTCTCCGTTATGGCCCTGAGAGA +
Preference number: 6 (lower is better)
Translates to: NCSRSACPAASR*RSIGLRYGPER
Trigger: TCTCTCAGGGCCATAACGGAGACCTATACTTCTCCAACGTGATGCTGCAGGACATGCAGACCGACTACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504149.1
ENST00000504476.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 72 bp AAAGGGACTTGCCCAGGAGACAAAGGTGGTGCCCACTaGGTCCTACAATTCTACAACTGTGGCAGAAGAGTT +
Preference number: 6 (lower is better)
Translates to: KGTCPGDKGGAH*VLQFYNCGRRV
Trigger: AACTCTTCTGCCACAGTTGTAGAATTGTAGGACCCAGTGGGCACCACCTTTGTCTCCTGGGCAAGTCCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS CCA 72 bp GGAGCCCCTTGGGTTGTCCTTGGTCAGAGAGAAGCCTaGCTGATAGGTCTAACAGCTTCAGATTGTCTAAAG +
Preference number: 6 (lower is better)
Translates to: GAPWVVLGQREA*LIGLTASDCLK
Trigger: CTTTAGACAATCTGAAGCTGTTAGACCTATCAGCCAGGCTTCTCTCTGACCAAGGACAACCCAAGGGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS TCA 72 bp TACTGGTATGCACTAAATGTGGCATTAACAAGAGCATaGACAAGCTCCCATCCCCATCCTCCTGGAGGGTGG +
Preference number: 6 (lower is better)
Translates to: YWYALNVALTRA*TSSHPHPPGGW
Trigger: CCACCCTCCAGGAGGATGGGGATGGGAGCTTGTTCATGCTCTTGTTAATGCCACATTTAGTGCATACCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS GCA 72 bp AGAGATGGCCAGGATAGGATGGAGATGACTATGGTTTaGAACACCCTGCTCACTAGAGGCTGTTTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: RDGQDRMEMTMV*NTLLTRGCLLL
Trigger: GAGAAGCAAACAGCCTCTAGTGAGCAGGGTGTTGCAAACCATAGTCATCTCCATCCTATCCTGGCCATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS GCA 72 bp CATCCAATTCAGGCTGCAAGGAAGGACCACATTCTCTaGTCTACTCATGATGCCAGTAACAGCGTCATCCTG +
Preference number: 6 (lower is better)
Translates to: HPIQAARKDHIL*STHDASNSVIL
Trigger: CAGGATGACGCTGTTACTGGCATCATGAGTAGAGCAGAGAATGTGGTCCTTCCTTGCAGCCTGAATTGGATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CCA 72 bp AGATACAATGCCAGCACCTACCTCTCACACATAAGATaGGTTCTCACCTTCCGAGGGCTTGAGGACTTGCAA +
Preference number: 6 (lower is better)
Translates to: RYNASTYLSHIR*VLTFRGLEDLQ
Trigger: TTGCAAGTCCTCAAGCCCTCGGAAGGTGAGAACCCATCTTATGTGTGAGAGGTAGGTGCTGGCATTGTATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CAA 72 bp ATAAACATGGTAGTTGCCACCATCCAGGTTGCTTCCTaGCCCATTCTTAAACCATCGCAGTGTGGGGATGGG +
Preference number: 6 (lower is better)
Translates to: INMVVATIQVAS*PILKPSQCGDG
Trigger: CCCATCCCCACACTGCGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGATGGTGGCAACTACCATGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000512826.5
ENST00000513543.6
ENST00000539706.6
ENST00000680427.1
CDS CAA 72 bp AGGCTGCGGAGGGAAGGTAAACTCCAGCGTCCCAAATaGCACATAAGTCAATCAACCATGGTCTGGTTCATC +
Preference number: 6 (lower is better)
Translates to: RLRREGKLQRPK*HISQSTMVWFI
Trigger: GATGAACCAGACCATGGTTGATTGACTTATGTGCAATTTGGGACGCTGGAGTTTACCTTCCCTCCGCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404076.5
CDS TCA 72 bp TTCCGAAAGTGCCTGTTAAGTTCTAGATGGCACCTGTaGAGCAAACCAGCATTTTCAGGGTCTCAGGAGCTC +
Preference number: 6 (lower is better)
Translates to: FRKCLLSSRWHL*SKPAFSGSQEL
Trigger: GAGCTCCTGAGACCCTGAAAATGCTGGTTTGCTTCACAGGTGCCATCTAGAACTTAACAGGCACTTTCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS GCA 72 bp GCTAGGGTTTCTTTCAAATATCTTATAGCCCGCATTTaGTACCCCTGGCCCTGGTTAGTGAGCTGGGTAGTT +
Preference number: 6 (lower is better)
Translates to: ARVSFKYLIARI*YPWPWLVSWVV
Trigger: AACTACCCAGCTCACTAACCAGGGCCAGGGGTAGCAAATGCGGGCTATAAGATATTTGAAAGAAACCCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471392.1
CDS CAA 72 bp ATGTACTCAACCACAAAGTCAGTTCCGGGCCCGAAATaGTGCTTCCAGGTGATGTTGGCCCATTTACTGTTG +
Preference number: 6 (lower is better)
Translates to: MYSTTKSVPGPK*CFQVMLAHLLL
Trigger: CAACAGTAAATGGGCCAACATCACCTGGAAGCACAATTTCGGGCCCGGAACTGACTTTGTGGTTGAGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339876.11
ENST00000401399.5
ENST00000413225.5
CDS CAA 72 bp CAGGTGATGAACTCATTTGCTCTTTGTGAAGCTGGCTaGGCAAATGGCTGTTTCCTAACTCCTCCTCCTCTC +
Preference number: 6 (lower is better)
Translates to: QVMNSFALCEAG*ANGCFLTPPPL
Trigger: GAGAGGAGGAGGAGTTAGGAAACAGCCATTTGCCAAGCCAGCTTCACAAAGAGCAAATGAGTTCATCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CAA 72 bp TCTCTGTGGTGGTTACTGGGGCTGGACAATAGGGCTTaGTTATCTGATGTTCTGTATTGGGGTGCACATAGG +
Preference number: 6 (lower is better)
Translates to: SLWWLLGLDNRA*LSDVLYWGAHR
Trigger: CCTATGTGCACCCCAATACAGAACATCAGATAACAAAGCCCTATTGTCCAGCCCCAGTAACCACCACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CAA 90 bp TGTCCTCCTGATTACTCCAGCCAAGAGGGCCCGAAGGGTGTGGATTaGAATATATCAGACATTAGAAAGGCAAGTAAGAACTGCTCCACC +
Preference number: 6 (lower is better)
Translates to: CPPDYSSQEGPKGVD*NISDIRKASKNCST
Trigger: GGTGGAGCAGTTCTTACTTGCCTTTCTAATGTCTGATATATTCAAATCCACACCCTTCGGGCCCTCTTGGCTGGAGTAATCAGGAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493914.5
CDS CAA 90 bp TCAGAGACATTTGTGATACGCAGGGCCTTATTAAAGTTCTCAAACTaGGCCTTATCAGATGGGAGGTCCCCACCTTTCTTGTACCATGCG +
Preference number: 6 (lower is better)
Translates to: SETFVIRRALLKFSN*ALSDGRSPPFLYHA
Trigger: CGCATGGTACAAGAAAGGTGGGGACCTCCCATCTGATAAGGCCAAGTTTGAGAACTTTAATAAGGCCCTGCGTATCACAAATGTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CAA 90 bp ATATATCAGACATTAGAAAGGCAAGTAAGAACTGCTCCACCACACTaGACCCTGGACTGCTTTCATGGGCAAGTCAAGACCACAGAGGAC +
Preference number: 6 (lower is better)
Translates to: IYQTLERQVRTAPPH*TLDCFHGQVKTTED
Trigger: GTCCTCTGTGGTCTTGACTTGCCCATGAAAGCAGTCCAGGGTCAAGTGTGGTGGAGCAGTTCTTACTTGCCTTTCTAATGTCTGATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493914.5
CDS TCA 72 bp TTATCCAAAACAGAGATGGCCAGGATAGGATGGAGATaGCTATGGTTTGCAACACCCTGCTCACTAGAGGCT +
Preference number: 6 (lower is better)
Translates to: LSKTEMARIGWR*LWFATPCSLEA
Trigger: AGCCTCTAGTGAGCAGGGTGTTGCAAACCATAGTCATCTCCATCCTATCCTGGCCATCTCTGTTTTGGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS CCA 72 bp GGCCTTATTAAAGTTCTCAAACTTGGCCTTATCAGATaGGAGGTCCCCACCTTTCTTGTACCATGCGATGTC +
Preference number: 6 (lower is better)
Translates to: GLIKVLKLGLIR*EVPTFLVPCDV
Trigger: GACATCGCATGGTACAAGAAAGGTGGGGACCTCCCATCTGATAAGGCCAAGTTTGAGAACTTTAATAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CCA 72 bp TGTTACCTTTGTATATCCCTTGTGTGTGGCAGTGTCTaGCACCTCACATTGTGGGTACTCAAGAAATGGCTG +
Preference number: 6 (lower is better)
Translates to: CYLCISLVCGSV*HLTLWVLKKWL
Trigger: CAGCCATTTCTTGAGTACCCACAATGTGAGGTGCCAGACACTGCCACACACAAGGGATATACAAAGGTAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CCA 72 bp GTGAGCTTCTTGTTACCTTTGTATATCCCTTGTGTGTaGCAGTGTCTGGCACCTCACATTGTGGGTACTCAA +
Preference number: 6 (lower is better)
Translates to: VSFLLPLYIPCV*QCLAPHIVGTQ
Trigger: TTGAGTACCCACAATGTGAGGTGCCAGACACTGCCACACACAAGGGATATACAAAGGTAACAAGAAGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CCA 72 bp GGGCTGCAGAACATTCTCTGTGGTGGTTACTGGGGCTaGACAATAGGGCTTTGTTATCTGATGTTCTGTATT +
Preference number: 6 (lower is better)
Translates to: GLQNILCGGYWG*TIGLCYLMFCI
Trigger: AATACAGAACATCAGATAACAAAGCCCTATTGTCCAGCCCCAGTAACCACCACAGAGAATGTTCTGCAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS CAA 72 bp GCAACAAGGCCTGTGTTTCAGAAGGCAAGTAACTCTTaGCTGGGGAAGCAAGAGCCACTTCCTTTCTTCATT +
Preference number: 6 (lower is better)
Translates to: ATRPVFQKASNS*LGKQEPLPFFI
Trigger: AATGAAGAAAGGAAGTGGCTCTTGCTTCCCCAGCAAAGAGTTACTTGCCTTCTGAAACACAGGCCTTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS CAA 72 bp ATCCTGTTCTGTTGGCGTCTCAGCACCACCGAGTTTTaGATGCCTGATCTCTATGCAACACAGAGGACATTA +
Preference number: 6 (lower is better)
Translates to: ILFCWRLSTTEF*MPDLYATQRTL
Trigger: TAATGTCCTCTGTGTTGCATAGAGATCAGGCATCAAAAACTCGGTGGTGCTGAGACGCCAACAGAACAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS CAA 72 bp GAGCCATTCCTAGGTAGAGAACCACTTACAGCTGTTTaGTACAGAGGCTGCAGTTCCCTATCCTCAGATAAG +
Preference number: 6 (lower is better)
Translates to: EPFLGREPLTAV*YRGCSSLSSDK
Trigger: CTTATCTGAGGATAGGGAACTGCAGCCTCTGTACAAAACAGCTGTAAGTGGTTCTCTACCTAGGAATGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495396.5
CDS CAA 90 bp AATTGGGCAGAGCCATTCCTAGGTAGAGAACCACTTACAGCTGTTTaGTACAGAGGCTGCAGTTCCCTATCCTCAGATAAGGATTCTCAT +
Preference number: 6 (lower is better)
Translates to: NWAEPFLGREPLTAV*YRGCSSLSSDKDSH
Trigger: ATGAGAATCCTTATCTGAGGATAGGGAACTGCAGCCTCTGTACAAAACAGCTGTAAGTGGTTCTCTACCTAGGAATGGCTCTGCCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495396.5
CDS CAA 90 bp ATGGAGATGACTATGGTTTGCAACACCCTGCTCACTAGAGGCTGTTaGCTTCTCTTTTTGCTGTGCTACTGGTATGCACTAAATGTGGCA +
Preference number: 6 (lower is better)
Translates to: MEMTMVCNTLLTRGC*LLFLLCYWYALNVA
Trigger: TGCCACATTTAGTGCATACCAGTAGCACAGCAAAAAGAGAAGCAAACAGCCTCTAGTGAGCAGGGTGTTGCAAACCATAGTCATCTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS TCA 72 bp AAGCTACAGACCTTCCCCTTGTTGGTAATAAAAGACTaGTGCTCAGTGCTTGGAAGTATCGCTGAATTCCCC +
Preference number: 6 (lower is better)
Translates to: KLQTFPLLVIKD*CSVLGSIAEFP
Trigger: GGGGAATTCAGCGATACTTCCAAGCACTGAGCATCAGTCTTTTATTACCAACAAGGGGAAGGTCTGTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS GCA 72 bp GTGATAAAAGATCTCCTGGTTTTCACTTCAAAGAGGTaGCTTCTGCACTACAACTCTGTCAGGCGTTGGTTG +
Preference number: 6 (lower is better)
Translates to: VIKDLLVFTSKR*LLHYNSVRRWL
Trigger: CAACCAACGCCTGACAGAGTTGTAGTGCAGAAGGCACCTCTTTGAAGTGAAAACCAGGAGATCTTTTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS GCA 72 bp GCTAAGGTCCCACGAGATTCTAACGCATCTACGGGATaGCTAATCACCTTCTTTCCTCATTATCCAAAACAG +
Preference number: 6 (lower is better)
Translates to: AKVPRDSNASTG*LITFFPHYPKQ
Trigger: CTGTTTTGGATAATGAGGAAAGAAGGTGATTAGGCATCCCGTAGATGCGTTAGAATCTCGTGGGACCTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS CAA 72 bp TTTGTGATACGCAGGGCCTTATTAAAGTTCTCAAACTaGGCCTTATCAGATGGGAGGTCCCCACCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: FVIRRALLKFSN*ALSDGRSPPFL
Trigger: CAAGAAAGGTGGGGACCTCCCATCTGATAAGGCCAAGTTTGAGAACTTTAATAAGGCCCTGCGTATCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339876.11
ENST00000367173.7
ENST00000401399.5
ENST00000403080.5
ENST00000404076.5
ENST00000404977.6
ENST00000430393.7
ENST00000504476.5
ENST00000512826.5
ENST00000513543.6
ENST00000514644.5
ENST00000539706.6
ENST00000680427.1
CDS CAA 72 bp ACTATGGTTTGCAACACCCTGCTCACTAGAGGCTGTTaGCTTCTCTTTTTGCTGTGCTACTGGTATGCACTA +
Preference number: 6 (lower is better)
Translates to: TMVCNTLLTRGC*LLFLLCYWYAL
Trigger: TAGTGCATACCAGTAGCACAGCAAAAAGAGAAGCAAACAGCCTCTAGTGAGCAGGGTGTTGCAAACCATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS CAA 90 bp ACCAGAAGAATCCTGTTCTGTTGGCGTCTCAGCACCACCGAGTTTTaGATGCCTGATCTCTATGCAACACAGAGGACATTAATTATCAAG +
Preference number: 6 (lower is better)
Translates to: TRRILFCWRLSTTEF*MPDLYATQRTLIIK
Trigger: CTTGATAATTAATGTCCTCTGTGTTGCATAGAGATCAGGCATCAAAAACTCGGTGGTGCTGAGACGCCAACAGAACAGGATTCTTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS CAA 90 bp ATGGTTTGCAACACCCTGCTCACTAGAGGCTGTTTGCTTCTCTTTTaGCTGTGCTACTGGTATGCACTAAATGTGGCATTAACAAGAGCA +
Preference number: 6 (lower is better)
Translates to: MVCNTLLTRGCLLLF*LCYWYALNVALTRA
Trigger: TGCTCTTGTTAATGCCACATTTAGTGCATACCAGTAGCACAGCAAAAAGAGAAGCAAACAGCCTCTAGTGAGCAGGGTGTTGCAAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS TCA 72 bp CTGTTGGCGTCTCAGCACCACCGAGTTTTTGATGCCTaGTCTCTATGCAACACAGAGGACATTAATTATCAA +
Preference number: 6 (lower is better)
Translates to: LLASQHHRVFDA*SLCNTEDINYQ
Trigger: TTGATAATTAATGTCCTCTGTGTTGCATAGAGATCAGGCATCAAAAACTCGGTGGTGCTGAGACGCCAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS CCA 72 bp TCAGGGAGGGGAAGCATAGATTGTCTCACTGACTCCTaGAATGTAAGAATTAAGGAATCTCCCTGGAAATCT +
Preference number: 6 (lower is better)
Translates to: SGRGSIDCLTDS*NVRIKESPWKS
Trigger: AGATTTCCAGGGAGATTCCTTAATTCTTACATTCCAGGAGTCAGTGAGACAATCTATGCTTCCCCTCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS CCA 72 bp ATGTTAGGCTCTGATTCTGCAAAGATACCTCGAAATTaGGCAGAGCCATTCCTAGGTAGAGAACCACTTACA +
Preference number: 6 (lower is better)
Translates to: MLGSDSAKIPRN*AEPFLGREPLT
Trigger: TGTAAGTGGTTCTCTACCTAGGAATGGCTCTGCCCAATTTCGAGGTATCTTTGCAGAATCAGAGCCTAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495396.5
CDS TCA 72 bp ATTACTCCAGCCAAGAGGGCCCGAAGGGTGTGGATTTaGATATATCAGACATTAGAAAGGCAAGTAAGAACT +
Preference number: 6 (lower is better)
Translates to: ITPAKRARRVWI*IYQTLERQVRT
Trigger: AGTTCTTACTTGCCTTTCTAATGTCTGATATATTCAAATCCACACCCTTCGGGCCCTCTTGGCTGGAGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493914.5
CDS TCA 72 bp TATGCAACACAGAGGACATTAATTATCAAGTTCCTATaGGCTGGGAGCCACTTTATCAAAGCCATGGTGCTG +
Preference number: 6 (lower is better)
Translates to: YATQRTLIIKFL*AGSHFIKAMVL
Trigger: CAGCACCATGGCTTTGATAAAGTGGCTCCCAGCTCATAGGAACTTGATAATTAATGTCCTCTGTGTTGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS TCA 72 bp AAGAAGGGGCTCTCTTTATCTATCTATTTGCAGAATTaGGTAATCAAGAAAGTGCATCATGGCCTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: KKGLSLSIYLQN*VIKKVHHGLAW
Trigger: CCAGGCCAGGCCATGATGCACTTTCTTGATTACTCAATTCTGCAAATAGATAGATAAAGAGAGCCCCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS GCA 72 bp TTGAATATATCAGACATTAGAAAGGCAAGTAAGAACTaGTCCACCACACTTGACCCTGGACTGCTTTCATGG +
Preference number: 6 (lower is better)
Translates to: LNISDIRKASKN*STTLDPGLLSW
Trigger: CCATGAAAGCAGTCCAGGGTCAAGTGTGGTGGAGCAGTTCTTACTTGCCTTTCTAATGTCTGATATATTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493914.5
CDS GCA 72 bp CTGCTCACTAGAGGCTGTTTGCTTCTCTTTTTGCTGTaGTACTGGTATGCACTAAATGTGGCATTAACAAGA +
Preference number: 6 (lower is better)
Translates to: LLTRGCLLLFLL*YWYALNVALTR
Trigger: TCTTGTTAATGCCACATTTAGTGCATACCAGTAGCACAGCAAAAAGAGAAGCAAACAGCCTCTAGTGAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504149.1
CDS CCA 72 bp TGCATGAAGCCTCGTATTTCAAAGACTTTACAAGTGTaGCTGCTGTATATTTTATTAGCATGCAAGGGGGCA +
Preference number: 6 (lower is better)
Translates to: CMKPRISKTLQV*LLYILLACKGA
Trigger: TGCCCCCTTGCATGCTAATAAAATATACAGCAGCCACACTTGTAAAGTCTTTGAAATACGAGGCTTCATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS TCA 72 bp GGGGGCACTGTCACCAACTCACTTGTCAAAAATAAATaGATAGAGTGCATTGGCGATGCATTTATTCATTAT +
Preference number: 6 (lower is better)
Translates to: GGTVTNSLVKNK*IECIGDAFIHY
Trigger: ATAATGAATAAATGCATCGCCAATGCACTCTATTCATTTATTTTTGACAAGTGAGTTGGTGACAGTGCCCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS CCA 72 bp CAATTAGATATTCTTATAGATGACTCCCCCTCTAGATaGTGTGAGCTTCTTGTTACCTTTGTATATCCCTTG +
Preference number: 6 (lower is better)
Translates to: QLDILIDDSPSR*CELLVTFVYPL
Trigger: CAAGGGATATACAAAGGTAACAAGAAGCTCACACCATCTAGAGGGGGAGTCATCTATAAGAATATCTAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512826.5
CDS TCA 72 bp ATTTTCCAGCAAAGATTTAATAGTGGAGTACTTGCATaGAGCCTCGTATTTCAAAGACTTTACAAGTGTGGC +
Preference number: 6 (lower is better)
Translates to: IFQQRFNSGVLA*SLVFQRLYKCG
Trigger: GCCACACTTGTAAAGTCTTTGAAATACGAGGCTTCATGCAAGTACTCCACTATTAAATCTTTGCTGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492085.1
CDS TCA 72 bp AAAAAGGCCTATTTCACCCTGAGAAGAGTAAACTTATaGAACATCTTTTTCCAAGATGTAAGGCACGATAAA +
Preference number: 6 (lower is better)
Translates to: KKAYFTLRRVNL*NIFFQDVRHDK
Trigger: TTTATCGTGCCTTACATCTTGGAAAAAGATGTTTCATAAGTTTACTCTTCTCAGGGTGAAATAGGCCTTTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000492085.1