RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NFAM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000235568

Ensembl transcript IDs: ENST00000329021.10, ENST00000355469.4

Found 349 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGAAGCAGAGCCCAACAGCCCGGGGCACCCGGACCCCAGCCACTaGCTGCCTGTGGATGGGTTTCTGGCCACGGTGCAGGGCTACTGC +
Preference number: 1 (lower is better)
Translates to: EEAEPNSPGHPDPSH*LPVDGFLATVQGYC
Trigger: GCAGTAGCCCTGCACCGTGGCCAGAAACCCATCCACAGGCAGGCAGTGGCTGGGGTCCGGGTGCCCCGGGCTGTTGGGCTCTGCTTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 90 bp AGCCCAACAGCCCGGGGCACCCGGACCCCAGCCACTGCCTGCCTGTaGATGGGTTTCTGGCCACGGTGCAGGGCTACTGCGAGGAGGAAA +
Preference number: 1 (lower is better)
Translates to: SPTARGTRTPATACL*MGFWPRCRATARRK
Trigger: TTTCCTCCTCGCAGTAGCCCTGCACCGTGGCCAGAAACCCATCCACAGGCAGGCAGTGGCTGGGGTCCGGGTGCCCCGGGCTGTTGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 90 bp GACCTTCCGGCTGCCATTGAGGGTCCCAGCACCAAACCCCACAGCTaGACCACTTGGGACCTCAATCCACAGGGGGCCAGGGCTGCGGCC +
Preference number: 1 (lower is better)
Translates to: DLPAAIEGPSTKPHS*TTWDLNPQGARAAA
Trigger: GGCCGCAGCCCTGGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGGACCCTCAATGGCAGCCGGAAGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 90 bp CAACAGCCCGGGGCACCCGGACCCCAGCCACTGCCTGCCTGTGGATaGGTTTCTGGCCACGGTGCAGGGCTACTGCGAGGAGGAAATGAG +
Preference number: 1 (lower is better)
Translates to: QQPGAPGPQPLPACG*VSGHGAGLLRGGNE
Trigger: CTCATTTCCTCCTCGCAGTAGCCCTGCACCGTGGCCAGAAACCCATCCACAGGCAGGCAGTGGCTGGGGTCCGGGTGCCCCGGGCTGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 90 bp CAGGGGAGGCCAAGGCCAGGTGTGGGTTTAATCGGGGTCTGTCGGTaGCAGGGCAGCTGCAGGGAGGCCGTGTTGGTGATGCCTGGGCCA +
Preference number: 1 (lower is better)
Translates to: QGRPRPGVGLIGVCR*QGSCREAVLVMPGP
Trigger: TGGCCCAGGCATCACCAACACGGCCTCCCTGCAGCTGCCCTGCCACCGACAGACCCCGATTAAACCCACACCTGGCCTTGGCCTCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 90 bp CTGGGGGTGCCAGACGTGGCTGAGATGTTTCTGCAGAGGGGAGGTTaGGAAGACCTAGGAGGGCAGGGCAGGCTGGGCCGGGAGAGATGG +
Preference number: 1 (lower is better)
Translates to: LGVPDVAEMFLQRGG*EDLGGQGRLGRERW
Trigger: CCATCTCTCCCGGCCCAGCCTGCCCTGCCCTCCTAGGTCTTCCCAACCTCCCCTCTGCAGAAACATCTCAGCCACGTCTGGCACCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR TCA 90 bp CGCCCCTGCAGGGTCCTCCCTCAGCTCAGAGGCTGCCCTACTGGCTaGGGTGCAGGCTGGTGCCAAGAGAGCATGCTGCTCTGTCAGCAT +
Preference number: 1 (lower is better)
Translates to: RPCRVLPQLRGCPTG*GAGWCQESMLLCQH
Trigger: ATGCTGACAGAGCAGCATGCTCTCTTGGCACCAGCCTGCACCTCAGCCAGTAGGGCAGCCTCTGAGCTGAGGGAGGACCCTGCAGGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR TCA 90 bp TCGGGGTCTGTCGGTGGCAGGGCAGCTGCAGGGAGGCCGTGTTGGTaGTGCCTGGGCCAGGGCACAGTGGTAAAGTTTAACCCAGGCTCC +
Preference number: 1 (lower is better)
Translates to: SGSVGGRAAAGRPCW*CLGQGTVVKFNPGS
Trigger: GGAGCCTGGGTTAAACTTTACCACTGTGCCCTGGCCCAGGCATCACCAACACGGCCTCCCTGCAGCTGCCCTGCCACCGACAGACCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 90 bp GCTGCCATTGAGGGTCCCAGCACCAAACCCCACAGCTGGACCACTTaGGACCTCAATCCACAGGGGGCCAGGGCTGCGGCCTATGGCAGA +
Preference number: 1 (lower is better)
Translates to: AAIEGPSTKPHSWTT*DLNPQGARAAAYGR
Trigger: TCTGCCATAGGCCGCAGCCCTGGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGGACCCTCAATGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR GCA 90 bp GGGGCCTTACTCCCAACTCAGATCAAGTCCTTTGGTGGCAGGGGCTaGCCCGGTCCTCTGACCCAGGGCAAGCTCTATGAGCGGTGGAGC +
Preference number: 1 (lower is better)
Translates to: GALLPTQIKSFGGRG*PGPLTQGKLYERWS
Trigger: GCTCCACCGCTCATAGAGCTTGCCCTGGGTCAGAGGACCGGGGCAGCCCCTGCCACCAAAGGACTTGATCTGAGTTGGGAGTAAGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 90 bp CCACCCCTCGCCCTGTGCCAGCTTGTCTCTGCAGGCTCTCAGTCCTaGGGGCTGGAGAACAGGTGCTCAGTCCTCTTTGCTGCCCACAGA +
Preference number: 1 (lower is better)
Translates to: PPLALCQLVSAGSQS*GLENRCSVLFAAHR
Trigger: TCTGTGGGCAGCAAAGAGGACTGAGCACCTGTTCTCCAGCCCCCAGGACTGAGAGCCTGCAGAGACAAGCTGGCACAGGGCGAGGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 90 bp ACTGAGGCTCAGGTGGCCAGTGACTTGCCCAAGTCCACAAGGCTGTaGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAG +
Preference number: 1 (lower is better)
Translates to: TEAQVASDLPKSTRL*EVEQGFKGGPEATQ
Trigger: CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGTGGACTTGGGCAAGTCACTGGCCACCTGAGCCTCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 90 bp CTGGCCACGGTGCAGGGCTACTGCGAGGAGGAAATGAGGGTGATGTaGGCACCTGAAACAGCAGAAATGGCTCAGGGCCAGGCACTGGGG +
Preference number: 1 (lower is better)
Translates to: LATVQGYCEEEMRVM*APETAEMAQGQALG
Trigger: CCCCAGTGCCTGGCCCTGAGCCATTTCTGCTGTTTCAGGTGCCCACATCACCCTCATTTCCTCCTCGCAGTAGCCCTGCACCGTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR TCA 90 bp CTGAGGTGCAGGCTGGTGCCAAGAGAGCATGCTGCTCTGTCAGCATaGGGCAGTGAGCAGGGCTCTGGGCAAGGGTGGCATCCAGGAAAG +
Preference number: 1 (lower is better)
Translates to: LRCRLVPREHAALSA*GSEQGSGQGWHPGK
Trigger: CTTTCCTGGATGCCACCCTTGCCCAGAGCCCTGCTCACTGCCTCATGCTGACAGAGCAGCATGCTCTCTTGGCACCAGCCTGCACCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR TCA 90 bp CACAGACGACCACCACGCTGGCAATGTCTCTGTCCACCAGAGGGGTaGTGGGTCAGCCCCCAAGAACCTCCTACGCCACAGGGAGGAGTT +
Preference number: 1 (lower is better)
Translates to: HRRPPRWQCLCPPEG*WVSPQEPPTPQGGV
Trigger: AACTCCTCCCTGTGGCGTAGGAGGTTCTTGGGGGCTGACCCATCACCCCTCTGGTGGACAGAGACATTGCCAGCGTGGTGGTCGTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR TCA 90 bp TACCCTGGCCGAGGCCACCAGGCTCAGTTCCTGCAATATTGGCTGTaGAGGGAACCCCAGCCACACCGGGTTCAGCGCAGAACCAGCACA +
Preference number: 1 (lower is better)
Translates to: YPGRGHQAQFLQYWL*REPQPHRVQRRTST
Trigger: TGTGCTGGTTCTGCGCTGAACCCGGTGTGGCTGGGGTTCCCTTCACAGCCAATATTGCAGGAACTGAGCCTGGTGGCCTCGGCCAGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR GCA 90 bp TCCCGTCCTTTCATGCTGTGCTCTCCTCCTCCTCCTCCTCCTCCCTaGCTCTCTCCTTGCTCACTGAAGACCTCAGCACCCACTGCCTCC +
Preference number: 1 (lower is better)
Translates to: SRPFMLCSPPPPPPP*LSPCSLKTSAPTAS
Trigger: GGAGGCAGTGGGTGCTGAGGTCTTCAGTGAGCAAGGAGAGAGGCAGGGAGGAGGAGGAGGAGGAGGAGAGCACAGCATGAAAGGACGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR GCA 90 bp CCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTaGTCTCCTCCTCCTCCTCCTCCTCCCTGCCTCTCTCCTTGCTCA +
Preference number: 1 (lower is better)
Translates to: PPLGQSPLGSRPFML*SPPPPPPPCLSPCS
Trigger: TGAGCAAGGAGAGAGGCAGGGAGGAGGAGGAGGAGGAGGAGAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 90 bp AGCCCCCTCAGGTGGACAAATGACATCCCCTGGCATTGCAAGGAATaGAGTGACGCCACTCAGCCTGGCTGGACTGAGCCAACGGCCCAC +
Preference number: 1 (lower is better)
Translates to: SPLRWTNDIPWHCKE*SDATQPGWTEPTAH
Trigger: GTGGGCCGTTGGCTCAGTCCAGCCAGGCTGAGTGGCGTCACTCCATTCCTTGCAATGCCAGGGGATGTCATTTGTCCACCTGAGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR GCA 90 bp CCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCAGGGCTaGGGCCTATGGCAGATAAAGATAGAGGAGGAGGGCTGGATGAAG +
Preference number: 1 (lower is better)
Translates to: PQLDHLGPQSTGGQG*GLWQIKIEEEGWMK
Trigger: CTTCATCCAGCCCTCCTCCTCTATCTTTATCTGCCATAGGCCGCAGCCCTGGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 90 bp GACCACTTGGGACCTCAATCCACAGGGGGCCAGGGCTGCGGCCTATaGCAGATAAAGATAGAGGAGGAGGGCTGGATGAAGCCACAGGTG +
Preference number: 1 (lower is better)
Translates to: DHLGPQSTGGQGCGL*QIKIEEEGWMKPQV
Trigger: CACCTGTGGCTTCATCCAGCCCTCCTCCTCTATCTTTATCTGCCATAGGCCGCAGCCCTGGCCCCCTGTGGATTGAGGTCCCAAGTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 90 bp ATCCCCTGGCATTGCAAGGAATGGAGTGACGCCACTCAGCCTGGCTaGACTGAGCCAACGGCCCACCTCTCCTGCATAAGCTGTCTGCCA +
Preference number: 1 (lower is better)
Translates to: IPWHCKEWSDATQPG*TEPTAHLSCISCLP
Trigger: TGGCAGACAGCTTATGCAGGAGAGGTGGGCCGTTGGCTCAGTCCAGCCAGGCTGAGTGGCGTCACTCCATTCCTTGCAATGCCAGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR GCA 90 bp TCTCCTTGCTCACTGAAGACCTCAGCACCCACTGCCTCCCAGCCTTaGCCTGAACCAAGCACAGACGACCACCACGCTGGCAATGTCTCT +
Preference number: 1 (lower is better)
Translates to: SPCSLKTSAPTASQP*PEPSTDDHHAGNVS
Trigger: AGAGACATTGCCAGCGTGGTGGTCGTCTGTGCTTGGTTCAGGGCAAGGCTGGGAGGCAGTGGGTGCTGAGGTCTTCAGTGAGCAAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR GCA 90 bp TGTCTTGACTGTCACTGCAAACTGAGGCTCAGGTGGCCAGTGACTTaGCCAAGTCCACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGG +
Preference number: 1 (lower is better)
Translates to: CLDCHCKLRLRWPVT*PSPQGCGRWSRDSR
Trigger: CCTTGAATCCCTGCTCCACCTCCCACAGCCTTGTGGACTTGGGCAAGTCACTGGCCACCTGAGCCTCAGTTTGCAGTGACAGTCAAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 90 bp GACAGGAAGGGCCTTGAATGTGAGGGTGAAATGATGGGGTGTCCCTaGGGGCCTTACTCCCAACTCAGATCAAGTCCTTTGGTGGCAGGG +
Preference number: 1 (lower is better)
Translates to: DRKGLECEGEMMGCP*GPYSQLRSSPLVAG
Trigger: CCCTGCCACCAAAGGACTTGATCTGAGTTGGGAGTAAGGCCCCCAGGGACACCCCATCATTTCACCCTCACATTCAAGGCCCTTCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 90 bp AGAACCAGCACATGTTCCCATGGAAACTCTGCTGCCAGAATCCCCTaGAAATGTTTGCTGAGGAGGGGCCACCGTTTACCGCACCCACTG +
Preference number: 1 (lower is better)
Translates to: RTSTCSHGNSAARIP*KCLLRRGHRLPHPL
Trigger: CAGTGGGTGCGGTAAACGGTGGCCCCTCCTCAGCAAACATTTCCAGGGGATTCTGGCAGCAGAGTTTCCATGGGAACATGTGCTGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 90 bp TCCAGACACACACAAAACACACGCCAACACCAAGTTCAGAGAGTCTaGCCTGACCCGCGCTCAGTCAAGGCTGAGGCCATCATTCTGACC +
Preference number: 1 (lower is better)
Translates to: SRHTQNTRQHQVQRV*PDPRSVKAEAIILT
Trigger: GGTCAGAATGATGGCCTCAGCCTTGACTGAGCGCGGGTCAGGCCAGACTCTCTGAACTTGGTGTTGGCGTGTGTTTTGTGTGTGTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR TCA 90 bp CCTCTGTACTGCCCCAGAAGCCTATTCCTTCTGAAGGACGAGTCTTaGAGGAAATGCACACCCACTGAGCTTCTGCCTGAGCCAGGGAGT +
Preference number: 1 (lower is better)
Translates to: PLYCPRSLFLLKDES*RKCTPTELLPEPGS
Trigger: ACTCCCTGGCTCAGGCAGAAGCTCAGTGGGTGTGCATTTCCTTCAAGACTCGTCCTTCAGAAGGAATAGGCTTCTGGGGCAGTACAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR GCA 90 bp TTTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTaGACCCCAGGAGCTCCCATTCATACCCTCTCTGTCCCCTCTCTG +
Preference number: 1 (lower is better)
Translates to: FLLFPPPPIHSGKQA*TPGAPIHTLSVPSL
Trigger: CAGAGAGGGGACAGAGAGGGTATGAATGGGAGCTCCTGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCCCAGTAGCCCAGTGCTaGTTGGGGGCAGGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGPVAQC*LGAGAG
Trigger: CCCCGCCCCTGCCCCCAAGCAGCACTGGGCTACTGG...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR TCA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCCCTGGCCTGTCCATCTaGTCGTGCTACCCCGTAGGC +
Preference number: 2 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGPGLSI*SCYPVG
Trigger: GCCTACGGGGTAGCACGATCAGATGGACAGGCCAGG...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp CCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCTTTGGTGGCAGGGGCTaGCCCGGTCCTCTGACCCAG +
Preference number: 2 (lower is better)
Translates to: PSTKPHSWTTWDLNPQGAFGGRG*PGPLTQ
Trigger: CTGGGTCAGAGGACCGGGGCAGCCCCTGCCACCAAA...GGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp CGTACAGGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCACTGCTAGGCGCCCCTaGAGGGTCCTCCCTCAGCTC +
Preference number: 2 (lower is better)
Translates to: RTGPGQWEWEPLGEGASGTARRP*RVLPQL
Trigger: GAGCTGAGGGAGGACCCTGCAGGGGCGCCTAGCAGT...GCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCCTGTACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp CACATCCGTCCGTCCTGGAAGGTCCACAGCTCCCCTTCACCTAGGCCTCACCTACCCACCCTGCCTGGCTaGCTCGTGCCTCTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: HIRPSWKVHSSPSPRPHLPTLPG*LVPLAQ
Trigger: CTGGGCCAGAGGCACGAGGCAGCCAGGCAGGGTGGG...TAGGTGAGGCCTAGGTGAAGGGGAGCTGTGGACCTTCCAGGACGGACGGATGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CCA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCAGCTCTGGGCAGCCCTaGCCTGTCCATCTGATCGTG +
Preference number: 2 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGSSGQP*PVHLIV
Trigger: CACGATCAGATGGACAGGCCAGGGCTGCCCAGAGCT...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CAA 90 bp ACCTCCCACCCTGAAGTTCCCTGCCACCCCTCGCCCTGTGCCAGCTaGTCTCTGCAGGCTCTCAGTCCTGGGGGCTGGAGAACAGGTGCT +
Preference number: 2 (lower is better)
Translates to: TSHPEVPCHPSPCAS*SLQALSPGGWRTGA
Trigger: AGCACCTGTTCTCCAGCCCCCAGGACTGAGAGCCTGCAGAGACAAGCTGGCACAGGGCGAGGGGTGGCAGGGAACTTCAGGGTGGGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR TCA 90 bp CCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCATGCCCCCAGCCTGCTaGCCACCTCTCAGCCATGTC +
Preference number: 2 (lower is better)
Translates to: PSTKPHSWTTWDLNPQGAMPPAC*PPLSHV
Trigger: GACATGGCTGAGAGGTGGTCAGCAGGCTGGGGGCAT...GGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCCTTCCCTCACCTCTCTaGTTACCTTGCTCCCACCCC +
Preference number: 2 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGLPSPL*LPCSHP
Trigger: GGGGTGGGAGCAAGGTAAGCAGAGAGGTGAGGGAAG...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CCA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCATGATGGGGTGTCCCTaGGGGCCTTACTCCCAACTC +
Preference number: 2 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGMMGCP*GPYSQL
Trigger: GAGTTGGGAGTAAGGCCCCCAGGGACACCCCATCAT...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGGGGAGTGGGAACCCTTaGGAGAGGGAGCTTCAGGCC +
Preference number: 2 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQGSGNP*ERELQA
Trigger: GGCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCC...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CAA 90 bp CCATGGGGCTTGAGCTTCTGCCTCAGAGGGACCTTCCGGCTGCCATaGAGGGTCCCAGCACCAAACCCCACAGCTGGACCACTTGGGACC +
Preference number: 2 (lower is better)
Translates to: PWGLSFCLRGTFRLP*RVPAPNPTAGPLGT
Trigger: GGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGGACCCTCAATGGCAGCCGGAAGGTCCCTCTGAGGCAGAAGCTCAAGCCCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CAA 90 bp CATGCTGTGCTCTCCTCCTCCTCCTCCTCCTCCCTGCCTCTCTCCTaGCTCACTGAAGACCTCAGCACCCACTGCCTCCCAGCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: HAVLSSSSSSSLPLS*LTEDLSTHCLPALP
Trigger: GGGCAAGGCTGGGAGGCAGTGGGTGCTGAGGTCTTCAGTGAGCAAGGAGAGAGGCAGGGAGGAGGAGGAGGAGGAGGAGAGCACAGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR TCA 90 bp CCAGGAAAGCCCTTGAAGACTGAGGGGCGCTTTGCTGGTTGGGCCAAGGGAGGAGCTGCCCCGGTCCTCTaGCCCAGGGCAAGCTCTATG +
Preference number: 2 (lower is better)
Translates to: PGKPLKTEGRFAGWAKGGAAPVL*PRASSM
Trigger: CATAGAGCTTGCCCTGGGTCAGAGGACCGGGGCAGC...TCCTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCTGCCTGGCTGCCTCGTaGCTCTGGCCCAGCTGGGTA +
Preference number: 2 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLCLAAS*LWPSWV
Trigger: TACCCAGCTGGGCCAGAGGCACGAGGCAGCCAGGCA...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR TCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGCCAAAGGTGCTTCTGTaGGCCAGTAGCCCAGTGCTG +
Preference number: 2 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQPKVLL*ASSPVL
Trigger: CAGCACTGGGCTACTGGCTCACAGAAGCACCTTTGG...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR TCA 90 bp CCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTTGGGCCAAAGCCCTTGGGAGGCCGTGTTGGTaGTGCCTGGGCCAGGGCACA +
Preference number: 2 (lower is better)
Translates to: PTEVSEHSCPTLPWAKALGRPCW*CLGQGT
Trigger: TGTGCCCTGGCCCAGGCATCACCAACACGGCCTCCC...AAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp CCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTTGGGCCAAAGCCCTTGAGCCAGTAGCCCAGTaGTGCTTGGGGGCAGGGGCG +
Preference number: 2 (lower is better)
Translates to: PTEVSEHSCPTLPWAKALEPVAQ*CLGAGA
Trigger: CGCCCCTGCCCCCAAGCAGCACTGGGCTACTGGCTC...AAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp CACATCCGTCCGTCCTGGAAGGTCCACAGCTCCCCTTCACCTAGGCCTCACCTACACCCACTGAGCTTCTaGCTGAGCCAGGGAGTCCCC +
Preference number: 2 (lower is better)
Translates to: HIRPSWKVHSSPSPRPHLHPLSF*LSQGVP
Trigger: GGGGACTCCCTGGCTCAGGCAGAAGCTCAGTGGGTG...TAGGTGAGGCCTAGGTGAAGGGGAGCTGTGGACCTTCCAGGACGGACGGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CCA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCAGACAGAAGGGACTTTaGGGGACTCCACCTTGGGTA +
Preference number: 2 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGRQKGL*GTPPWV
Trigger: TACCCAAGGTGGAGTCCCCCAAAGTCCCTTCTGTCT...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR TCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCGCTGCTCTGTCAGCATaGGGCAGTGAGCAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLAALSA*GSEQGS
Trigger: AGAGCCCTGCTCACTGCCTCATGCTGACAGAGCAGC...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR TCA 90 bp CACATCCGTCCGTCCTGGAAGGTCCACAGCTCCCCTTCACCTAGGCCTCACCTACTCCCAGCCTTGCCCTaGACCAAGCACAGACGACCA +
Preference number: 2 (lower is better)
Translates to: HIRPSWKVHSSPSPRPHLLPALP*TKHRRP
Trigger: TGGTCGTCTGTGCTTGGTTCAGGGCAAGGCTGGGAG...TAGGTGAGGCCTAGGTGAAGGGGAGCTGTGGACCTTCCAGGACGGACGGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCACCCCAGCCACTGCCTaGCTGTGGATGGGTTTCTGG +
Preference number: 2 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLTPATA*LWMGFW
Trigger: CCAGAAACCCATCCACAGGCAGGCAGTGGCTGGGGT...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp CCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTTGGGCCAAAGCCCTTCCTGGGAGGCCCCTGTaGACACCTGGCAGCTTCACC +
Preference number: 2 (lower is better)
Translates to: PTEVSEHSCPTLPWAKALPGRPL*TPGSFT
Trigger: GGTGAAGCTGCCAGGTGTGCACAGGGGCCTCCCAGG...AAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGAGTGGAAAGCAAGCCTaGACCCCAGGAGCTCCCATT +
Preference number: 2 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQSGKQA*TPGAPI
Trigger: AATGGGAGCTCCTGGGGTGCAGGCTTGCTTTCCACT...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCACAGGGCCAGGCCAATaGGAGTGGGAACCCTTGGGA +
Preference number: 2 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLTGPGQ*EWEPLG
Trigger: TCCCAAGGGTTCCCACTCCCATTGGCCTGGCCCTGT...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR TCA 90 bp AGGGTCCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGAATGTGAGGGTGAAATaGTGGGGTGTCCCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: RVPAPNPTAGPLGTSIHRNVRVK*WGVPGG
Trigger: GCCCCCAGGGACACCCCATCATTTCACCCTCACATT...CCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGGACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CCA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTTCAGATCAAGTCCTTTaGTGGCAGGGGCTGCCCCGG +
Preference number: 2 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSSDQVL*WQGLPR
Trigger: CCGGGGCAGCCCCTGCCACCAAAGGACTTGATCTGA...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CCA 90 bp CCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTTGGGCCAAAGCCCTTCAGAGGCTGCCCTACTaGCTGAGGTGCAGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: PTEVSEHSCPTLPWAKALQRLPY*LRCRLV
Trigger: CACCAGCCTGCACCTCAGCCAGTAGGGCAGCCTCTG...AAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CCA 90 bp AGGGTCCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGCTCTCAGCCATGTCCTaGGCCTCCAGATCTGTCCCT +
Preference number: 2 (lower is better)
Translates to: RVPAPNPTAGPLGTSIHRLSAMS*ASRSVP
Trigger: AGGGACAGATCTGGAGGCCCAGGACATGGCTGAGAG...CCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCTGGGGGACTCCACCTTaGGTAGAAGGAGGGACAGCT +
Preference number: 2 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLWGTPP*VEGGTA
Trigger: AGCTGTCCCTCCTTCTACCCAAGGTGGAGTCCCCCA...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp CCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTTGGGCCAAAGCCCTTCCCTACTGGCTGAGGTaGAGGCTGGTGCCAAGAGAG +
Preference number: 2 (lower is better)
Translates to: PTEVSEHSCPTLPWAKALPYWLR*RLVPRE
Trigger: CTCTCTTGGCACCAGCCTGCACCTCAGCCAGTAGGG...AAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCCTGCAGAACCAAAGGTaGTTCTGTGAGCCAGTAGCC +
Preference number: 2 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLLQNQR*FCEPVA
Trigger: GGCTACTGGCTCACAGAAGCACCTTTGGTTCTGCAG...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CCA 90 bp CCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTTGGGCCAAAGCCCTTCTGTGGATGGGTTTCTaGCCACGGTGCAGGGCTACT +
Preference number: 2 (lower is better)
Translates to: PTEVSEHSCPTLPWAKALLWMGF*PRCRAT
Trigger: AGTAGCCCTGCACCGTGGCCAGAAACCCATCCACAG...AAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CCA 90 bp CCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTTGGGCCAAAGCCCTTCTCTCCTGGTCTTGCTaGCTTCGGTTTTCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: PTEVSEHSCPTLPWAKALLSWSC*LRFSQG
Trigger: CCCCTGGGAAAACCGAAGCCAGCAAGACCAGGAGAG...AAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR TCA 90 bp TTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGTGTCCCCATGGGGCTTaGGCTTCTGCCTCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: FFSSLLHPFIVESKPAPQCPHGA*ASASEG
Trigger: TCCCTCTGAGGCAGAAGCTCAAGCCCCATGGGGACA...CTGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR TCA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCGAATTTTATTCCAAGTaGGGCAAAAACCATGCAAGG +
Preference number: 2 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGEFYSK*GKNHAR
Trigger: CCTTGCATGGTTTTTGCCTCACTTGGAATAAAATTC...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp TTTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCACTCCCGCCTGCCCCATaGACCTCCCACCCTGAAGTT +
Preference number: 2 (lower is better)
Translates to: FLLFPPPPIHSGKQACTPLPPAP*TSHPEV
Trigger: AACTTCAGGGTGGGAGGTGCATGGGGCAGGCGGGAG...TGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CCA 90 bp TTTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGATCAAGTCCTTTGGTaGCAGGGGCTGCCCCGGTCC +
Preference number: 2 (lower is better)
Translates to: FLLFPPPPIHSGKQACTPDQVLW*QGLPRS
Trigger: GGACCGGGGCAGCCCCTGCCACCAAAGGACTTGATC...TGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CAA 90 bp TTTGCTGCCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTaGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCT +
Preference number: 2 (lower is better)
Translates to: FAAHRSLRTFLPHPP*GQSPLGSRPFMLCS
Trigger: AGAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGGCAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp TTTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCACAGCTTTCCCTTCCCTaGAGGGAGGGGCATGACCTG +
Preference number: 2 (lower is better)
Translates to: FLLFPPPPIHSGKQACTPQLSLP*REGHDL
Trigger: CAGGTCATGCCCCTCCCTGCAGGGAAGGGAAAGCTG...TGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCAAGATGGGAAAGCCTTaGTGGTTGGGGCATAGAATG +
Preference number: 2 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLKMGKP*WLGHRM
Trigger: CATTCTATGCCCCAACCACCAAGGCTTTCCCATCTT...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CAA 90 bp ACATGTTCCCATGGAAACTCTGCTGCCAGAATCCCCTGGAAATGTTaGCTGAGGAGGGGCCACCGTTTACCGCACCCACTGCAAGTTCTG +
Preference number: 2 (lower is better)
Translates to: TCSHGNSAARIPWKC*LRRGHRLPHPLQVL
Trigger: CAGAACTTGCAGTGGGTGCGGTAAACGGTGGCCCCTCCTCAGCAAACATTTCCAGGGGATTCTGGCAGCAGAGTTTCCATGGGAACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR TCA 90 bp TTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGATCCAGGAAAGCCCTTaGAGACTGAGGGGCGCTTTG +
Preference number: 2 (lower is better)
Translates to: FFSSLLHPFIVESKPAPQIQESP*RLRGAL
Trigger: CAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGGAT...CTGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR TCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCTGCCCATTTTACAAATaGGCAAAGGTGGGAGAACTC +
Preference number: 2 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLCPFYK*AKVGEL
Trigger: GAGTTCTCCCACCTTTGCTCATTTGTAAAATGGGCA...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp TTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGGGTGCCAAGAGAGCATaGTGCTCTGTCAGCATGAGG +
Preference number: 2 (lower is better)
Translates to: FFSSLLHPFIVESKPAPQGAKRA*CSVSMR
Trigger: CCTCATGCTGACAGAGCAGCATGCTCTCTTGGCACC...CTGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp TTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGGCCCTCACCCCAACATaGCAGAATCTCCTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: FFSSLLHPFIVESKPAPQALTPT*QNLLPL
Trigger: GAGAGGAAGGAGATTCTGGCATGTTGGGGTGAGGGC...CTGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp TTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGCGTCCTTTCATGCTGTaGTCTCCTCCTCCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: FFSSLLHPFIVESKPAPQRPFML*SPPPPP
Trigger: AGGAGGAGGAGGAGGAGAGCACAGCATGAAAGGACG...CTGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CCA 90 bp CCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTTGGGCCAAAGCCCTTGAAATGAGGGTGATGTaGGCACCTGAAACAGCAGAA +
Preference number: 2 (lower is better)
Translates to: PTEVSEHSCPTLPWAKALEMRVM*APETAE
Trigger: TTCTGCTGTTTCAGGTGCCCACATCACCCTCATTTC...AAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CCA 90 bp TTTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAATGGGAAAGCCTTGGTaGTTGGGGCATAGAATGGGG +
Preference number: 2 (lower is better)
Translates to: FLLFPPPPIHSGKQACTPMGKPW*LGHRMG
Trigger: CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCAT...TGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR GCA 90 bp TTTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCACTCAGTCCTCTTTGCTaGCCACAGAAGTCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: FLLFPPPPIHSGKQACTPLSPLC*PQKSQN
Trigger: GTTCTGAGACTTCTGTGGGCAGCAAAGAGGACTGAG...TGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CCA 90 bp TTTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGCCACAGGGAGGAGTTaGAATTTTATTCCAAGTGAG +
Preference number: 2 (lower is better)
Translates to: FLLFPPPPIHSGKQACTPATGRS*NFIPSE
Trigger: CTCACTTGGAATAAAATTCCAACTCCTCCCTGTGGC...TGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CCA 90 bp AGAGGTAGGTCAGAGAATCAGGGCTTTGGTGATGGGCTCACTCATAACTTTTGGGAATGTGATGAAAACTaGCTGGGTGTGCTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: RGRSENQGFGDGLTHNFWECDEN*LGVLAH
Trigger: ATGAGCCAGCACACCCAGCCAGTTTTCATCACATTC...CCAAAAGTTATGAGTGAGCCCATCACCAAAGCCCTGATTCTCTGACCTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355469.4
3UTR CCA 72 bp GAGGGTCCCAGCACCAAACCCCACAGCTGGACCACTTaGGACCTCAATCCACAGGGGGCCAGGGCTGCGGCC +
Preference number: 3 (lower is better)
Translates to: EGPSTKPHSWTT*DLNPQGARAAA
Trigger: GGCCGCAGCCCTGGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGGACCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CAA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGGGGGCGCTTTGCTGGTaGGGCCAAGGGAGGAAGGGC +
Preference number: 3 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQGALCW*GQGRKG
Trigger: GCCCTTCCTCCCTTGGCCCAACCAGCAAAGCGCCCC...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR GCA 72 bp TACCTCGGCTCCCCACACAGCACTGCTAGGCGCCCCTaGAGGGTCCTCCCTCAGCTCAGAGGCTGCCCTACT +
Preference number: 3 (lower is better)
Translates to: YLGSPHSTARRP*RVLPQLRGCPT
Trigger: AGTAGGGCAGCCTCTGAGCTGAGGGAGGACCCTGCAGGGGCGCCTAGCAGTGCTGTGTGGGGAGCCGAGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 72 bp GTGGAGCCAGGAGCCTGGGAGGCCCCTGTGCACACCTaGCAGCTTCACCTCCCCAAACAGGCCCGGAGTTCA +
Preference number: 3 (lower is better)
Translates to: VEPGAWEAPVHT*QLHLPKQARSS
Trigger: TGAACTCCGGGCCTGTTTGGGGAGGTGAAGCTGCCAGGTGTGCACAGGGGCCTCCCAGGCTCCTGGCTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CAA 90 bp CCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCAGACTGAGGGGCGCTTaGCTGGTTGGGCCAAGGGAG +
Preference number: 3 (lower is better)
Translates to: PSTKPHSWTTWDLNPQGARLRGA*LVGPRE
Trigger: CTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCT...GGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 72 bp GCTGCCATTGAGGGTCCCAGCACCAAACCCCACAGCTaGACCACTTGGGACCTCAATCCACAGGGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: AAIEGPSTKPHS*TTWDLNPQGAR
Trigger: CCTGGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGGACCCTCAATGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 72 bp CCAAGGCCAGGTGTGGGTTTAATCGGGGTCTGTCGGTaGCAGGGCAGCTGCAGGGAGGCCGTGTTGGTGATG +
Preference number: 3 (lower is better)
Translates to: PRPGVGLIGVCR*QGSCREAVLVM
Trigger: CATCACCAACACGGCCTCCCTGCAGCTGCCCTGCCACCGACAGACCCCGATTAAACCCACACCTGGCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CAA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCTGGGTAGGTAGGGATTaGCATAGCTGCTCCCCAGCT +
Preference number: 3 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGWVGRD*HSCSPA
Trigger: AGCTGGGGAGCAGCTATGCAAATCCCTACCTACCCA...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CAA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGCCACAGCTGGACCACTaGGGACCTCAATCCACAGGG +
Preference number: 3 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQPQLDH*GPQSTG
Trigger: CCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGG...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CAA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGGGCCCTCTCCTGGTCTaGCTGGCTTCGGTTTTCCCA +
Preference number: 3 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQGPLLV*LASVFP
Trigger: TGGGAAAACCGAAGCCAGCAAGACCAGGAGAGGGCC...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CAA 90 bp CCAGGAAAGCCCTTGAAGACTGAGGGGCGCTTTGCTGGTTGGGCCAAGGGAGGACTCAGATCAAGTCCTTaGGTGGCAGGGGCTGCCCCG +
Preference number: 3 (lower is better)
Translates to: PGKPLKTEGRFAGWAKGGLRSSP*VAGAAP
Trigger: CGGGGCAGCCCCTGCCACCAAAGGACTTGATCTGAG...TCCTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR GCA 72 bp TCTCCTCCTCCTCCTCCTCCTCCCTGCCTCTCTCCTTaGTCACTGAAGACCTCAGCACCCACTGCCTCCCAG +
Preference number: 3 (lower is better)
Translates to: SPPPPPPPCLSP*SLKTSAPTASQ
Trigger: CTGGGAGGCAGTGGGTGCTGAGGTCTTCAGTGAGCAAGGAGAGAGGCAGGGAGGAGGAGGAGGAGGAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 72 bp GGAAAGCCCTTGAAGACTGAGGGGCGCTTTGCTGGTTaGGCCAAGGGAGGAAGGGCCTGCCTGGCAGAAGGA +
Preference number: 3 (lower is better)
Translates to: GKPLKTEGRFAG*AKGGRACLAEG
Trigger: TCCTTCTGCCAGGCAGGCCCTTCCTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 72 bp TGCCCCCAGCCTGCTGACCACCTCTCAGCCATGTCCTaGGCCTCCAGATCTGTCCCTGATCCTAGTCTTGCC +
Preference number: 3 (lower is better)
Translates to: CPQPADHLSAMS*ASRSVPDPSLA
Trigger: GGCAAGACTAGGATCAGGGACAGATCTGGAGGCCCAGGACATGGCTGAGAGGTGGTCAGCAGGCTGGGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 72 bp CAGGTGGCCAGTGACTTGCCCAAGTCCACAAGGCTGTaGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAG +
Preference number: 3 (lower is better)
Translates to: QVASDLPKSTRL*EVEQGFKGGPE
Trigger: CTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGTGGACTTGGGCAAGTCACTGGCCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CAA 90 bp CGTACAGGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCATCCAGGAAAGCCCTaGAAGACTGAGGGGCGCTTT +
Preference number: 3 (lower is better)
Translates to: RTGPGQWEWEPLGEGASGHPGKP*KTEGRF
Trigger: AAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGGATG...GCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCCTGTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CAA 90 bp AGGGTCCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGTTGGGGGACTCCACCTaGGGTAGAAGGAGGGACAGC +
Preference number: 3 (lower is better)
Translates to: RVPAPNPTAGPLGTSIHRLGDST*GRRRDS
Trigger: GCTGTCCCTCCTTCTACCCAAGGTGGAGTCCCCCAA...CCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGGACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR TCA 72 bp CGAGGCCACCAGGCTCAGTTCCTGCAATATTGGCTGTaGAGGGAACCCCAGCCACACCGGGTTCAGCGCAGA +
Preference number: 3 (lower is better)
Translates to: RGHQAQFLQYWL*REPQPHRVQRR
Trigger: TCTGCGCTGAACCCGGTGTGGCTGGGGTTCCCTTCACAGCCAATATTGCAGGAACTGAGCCTGGTGGCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR GCA 72 bp CTCCCAACTCAGATCAAGTCCTTTGGTGGCAGGGGCTaGCCCGGTCCTCTGACCCAGGGCAAGCTCTATGAG +
Preference number: 3 (lower is better)
Translates to: LPTQIKSFGGRG*PGPLTQGKLYE
Trigger: CTCATAGAGCTTGCCCTGGGTCAGAGGACCGGGGCAGCCCCTGCCACCAAAGGACTTGATCTGAGTTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR GCA 72 bp GACCACTTGGGACCTCAATCCACAGGGGGCCAGGGCTaGGGCCTATGGCAGATAAAGATAGAGGAGGAGGGC +
Preference number: 3 (lower is better)
Translates to: DHLGPQSTGGQG*GLWQIKIEEEG
Trigger: GCCCTCCTCCTCTATCTTTATCTGCCATAGGCCGCAGCCCTGGCCCCCTGTGGATTGAGGTCCCAAGTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR GCA 72 bp GGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTaGTCTCCTCCTCCTCCTCCTCCTCCCTGCCTCTCT +
Preference number: 3 (lower is better)
Translates to: GQSPLGSRPFML*SPPPPPPPCLS
Trigger: AGAGAGGCAGGGAGGAGGAGGAGGAGGAGGAGAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CAA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTAGGGGTCCATCATCCTaGTCTGTCCCCCAGACCTCC +
Preference number: 3 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSRGPSS*SVPQTS
Trigger: GGAGGTCTGGGGGACAGACAAGGATGATGGACCCCT...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR GCA 72 bp TTCATGCTGTGCTCTCCTCCTCCTCCTCCTCCTCCCTaGCTCTCTCCTTGCTCACTGAAGACCTCAGCACCC +
Preference number: 3 (lower is better)
Translates to: FMLCSPPPPPPP*LSPCSLKTSAP
Trigger: GGGTGCTGAGGTCTTCAGTGAGCAAGGAGAGAGGCAGGGAGGAGGAGGAGGAGGAGGAGAGCACAGCATGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR GCA 72 bp AGCCCCCTCAGGTGGACAAATGACATCCCCTGGCATTaGAAGGAATGGAGTGACGCCACTCAGCCTGGCTGG +
Preference number: 3 (lower is better)
Translates to: SPLRWTNDIPWH*KEWSDATQPGW
Trigger: CCAGCCAGGCTGAGTGGCGTCACTCCATTCCTTGCAATGCCAGGGGATGTCATTTGTCCACCTGAGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 72 bp GGACCTCAATCCACAGGGGGCCAGGGCTGCGGCCTATaGCAGATAAAGATAGAGGAGGAGGGCTGGATGAAG +
Preference number: 3 (lower is better)
Translates to: GPQSTGGQGCGL*QIKIEEEGWMK
Trigger: CTTCATCCAGCCCTCCTCCTCTATCTTTATCTGCCATAGGCCGCAGCCCTGGCCCCCTGTGGATTGAGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CAA 90 bp CCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTTGGGCCAAAGCCCTTTCCTTCCTCTCCAGCTaGTACCCAAGCCCTCTCTGC +
Preference number: 3 (lower is better)
Translates to: PTEVSEHSCPTLPWAKALSFLSS*YPSPLC
Trigger: GCAGAGAGGGCTTGGGTACAAGCTGGAGAGGAAGGA...AAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CAA 90 bp TTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGCTGTCCCCATGGGGCTaGAGCTTCTGCCTCAGAGGG +
Preference number: 3 (lower is better)
Translates to: FFSSLLHPFIVESKPAPQLSPWG*SFCLRG
Trigger: CCCTCTGAGGCAGAAGCTCAAGCCCCATGGGGACAG...CTGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR GCA 72 bp CTGGGGGCTGGAGAACAGGTGCTCAGTCCTCTTTGCTaGCCACAGAAGTCTCAGAACATTCTTGCCCCACCC +
Preference number: 3 (lower is better)
Translates to: LGAGEQVLSPLC*PQKSQNILAPP
Trigger: GGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGGCAGCAAAGAGGACTGAGCACCTGTTCTCCAGCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 72 bp CACGTACAGGGCCAGGCCAATGGGAGTGGGAACCCTTaGGAGAGGGAGCTTCAGGCCATTCATTCAGTTCCT +
Preference number: 3 (lower is better)
Translates to: HVQGQANGSGNP*ERELQAIHSVP
Trigger: AGGAACTGAATGAATGGCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCCTGTACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 72 bp GTGCAGGGCTACTGCGAGGAGGAAATGAGGGTGATGTaGGCACCTGAAACAGCAGAAATGGCTCAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: VQGYCEEEMRVM*APETAEMAQGQ
Trigger: CTGGCCCTGAGCCATTTCTGCTGTTTCAGGTGCCCACATCACCCTCATTTCCTCCTCGCAGTAGCCCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 72 bp CAAGCAAGTGCTGACAGAGCAGGAGTCAAGCGGGGGTaGGGTTGGAGGCTGAAACCCATTGAAGGGGTCAAC +
Preference number: 3 (lower is better)
Translates to: QASADRAGVKRG*GWRLKPIEGVN
Trigger: GTTGACCCCTTCAATGGGTTTCAGCCTCCAACCCCACCCCCGCTTGACTCCTGCTCTGTCAGCACTTGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 72 bp AGGTGGACAAATGACATCCCCTGGCATTGCAAGGAATaGAGTGACGCCACTCAGCCTGGCTGGACTGAGCCA +
Preference number: 3 (lower is better)
Translates to: RWTNDIPWHCKE*SDATQPGWTEP
Trigger: TGGCTCAGTCCAGCCAGGCTGAGTGGCGTCACTCCATTCCTTGCAATGCCAGGGGATGTCATTTGTCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 72 bp ACACAAAACACACGCCAACACCAAGTTCAGAGAGTCTaGCCTGACCCGCGCTCAGTCAAGGCTGAGGCCATC +
Preference number: 3 (lower is better)
Translates to: TQNTRQHQVQRV*PDPRSVKAEAI
Trigger: GATGGCCTCAGCCTTGACTGAGCGCGGGTCAGGCCAGACTCTCTGAACTTGGTGTTGGCGTGTGTTTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CAA 90 bp TTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGCAGACAGAAGGGACTTaGGGGGACTCCACCTTGGGT +
Preference number: 3 (lower is better)
Translates to: FFSSLLHPFIVESKPAPQQTEGT*GDSTLG
Trigger: ACCCAAGGTGGAGTCCCCCAAAGTCCCTTCTGTCTG...CTGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 72 bp ACATGTTCCCATGGAAACTCTGCTGCCAGAATCCCCTaGAAATGTTTGCTGAGGAGGGGCCACCGTTTACCG +
Preference number: 3 (lower is better)
Translates to: TCSHGNSAARIP*KCLLRRGHRLP
Trigger: CGGTAAACGGTGGCCCCTCCTCAGCAAACATTTCCAGGGGATTCTGGCAGCAGAGTTTCCATGGGAACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR-3UTR CAA 90 bp CGCAGAGGTAGGTCAGAGAATCAGGGCTTTGGTGATGGGCTCACTCATAACTTTGTAATCCCAACACTCTaGGAGGCTGAGGTGGGCGGA +
Preference number: 3 (lower is better)
Translates to: RRGRSENQGFGDGLTHNFVIPTL*EAEVGG
Trigger: TCCGCCCACCTCAGCCTCCAAGAGTGTTGGGATTAC...AAAGTTATGAGTGAGCCCATCACCAAAGCCCTGATTCTCTGACCTACCTCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355469.4
3UTR TCA 72 bp TGCCCCAGAAGCCTATTCCTTCTGAAGGACGAGTCTTaGAGGAAATGCACACCCACTGAGCTTCTGCCTGAG +
Preference number: 3 (lower is better)
Translates to: CPRSLFLLKDES*RKCTPTELLPE
Trigger: CTCAGGCAGAAGCTCAGTGGGTGTGCATTTCCTTCAAGACTCGTCCTTCAGAAGGAATAGGCTTCTGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR GCA 72 bp TCAGCGCAGAACCAGCACATGTTCCCATGGAAACTCTaGTGCCAGAATCCCCTGGAAATGTTTGCTGAGGAG +
Preference number: 3 (lower is better)
Translates to: SAQNQHMFPWKL*CQNPLEMFAEE
Trigger: CTCCTCAGCAAACATTTCCAGGGGATTCTGGCAGCAGAGTTTCCATGGGAACATGTGCTGGTTCTGCGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CCA 72 bp AAATCCATCCCTGAAATCCCAGAGGCATCTTTAGAATaGAGCATGGACTTTACATTAGAATGTGCTTTAACA +
Preference number: 3 (lower is better)
Translates to: KSIPEIPEASLE*SMDFTLECALT
Trigger: TGTTAAAGCACATTCTAATGTAAAGTCCATGCTCCATTCTAAAGATGCCTCTGGGATTTCAGGGATGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCCGGTGGCAGGGCAGCTaGAGGGAGGCCGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGRWQGS*REAVLV
Trigger: CACCAACACGGCCTCCCTGCAGCTGCCCTGCCACCG...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCGCTGCCCCGGTCCTCTaGCCCAGGGCAAGCTCTATG +
Preference number: 4 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGAAPVL*PRASSM
Trigger: CATAGAGCTTGCCCTGGGTCAGAGGACCGGGGCAGC...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CGTACAGGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCCCACCCTGCCTGGCTaGCTCGTGCCTCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RTGPGQWEWEPLGEGASGPTLPG*LVPLAQ
Trigger: CTGGGCCAGAGGCACGAGGCAGCCAGGCAGGGTGGG...GCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCCTGTACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCCACCCTGAAGTTCCCTaGCACCCCTCGCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGHPEVP*HPSPCA
Trigger: GGCACAGGGCGAGGGGTGGCAGGGAACTTCAGGGTG...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGGAGACAGGGCTGCCCTaGTGCGGTAGGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQETGLP*CGRAQG
Trigger: CCCCTGGGCCCTACCGCAGCAGGGCAGCCCTGTCTC...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGGGGAGGCCGTGTTGGTaGTGCCTGGGCCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQGRPCW*CLGQGT
Trigger: TGTGCCCTGGCCCAGGCATCACCAACACGGCCTCCC...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCAGGAAAGCCCTTGAAGACTGAGGGGCGCTTTGCTGGTTGGGCCAAGGGAGGAAGGGCGTGGGAGGCCTaGCAGGGCCCGCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: PGKPLKTEGRFAGWAKGGRAWEA*QGPPPH
Trigger: GTGAGGTGGCGGGCCCTGCCAGGCCTCCCACGCCCT...TCCTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp CGTACAGGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCCGGCAGCACAAGGGTaGCCTGGCAGTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: RTGPGQWEWEPLGEGASGPAAQG*PGSPGC
Trigger: ACACCCTGGACTGCCAGGTCACCCTTGTGCTGCCGG...GCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCCTGTACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp AGGGTCCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGCCAGTAGCCCAGTGCTaGTTGGGGGCAGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RVPAPNPTAGPLGTSIHRPVAQC*LGAGAG
Trigger: CCCCGCCCCTGCCCCCAAGCAGCACTGGGCTACTGG...CCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGGACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCTCAGATCAAGTCCTTTaGTGGCAGGGGCTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGSDQVL*WQGLPR
Trigger: CCGGGGCAGCCCCTGCCACCAAAGGACTTGATCTGA...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCGGCCGGGAGAGATGGTaGGAAATCCCACCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGGRERW*EIPPGQ
Trigger: CTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCC...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCTTGCAAGGAATGGAGTaGCGCCACTCAGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGLQGME*RHSAWL
Trigger: CAGCCAGGCTGAGTGGCGTCACTCCATTCCTTGCAA...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCGCGCTCAGTCAAGGCTaGGGCCATCATTCTGACCAC +
Preference number: 4 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGALSQG*GHHSDH
Trigger: GTGGTCAGAATGATGGCCTCAGCCTTGACTGAGCGC...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp GGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCATTCACCACCCCTCGCCCTGTaGCAGCTTGTCTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GPGQWEWEPLGEGASGHSPPLAL*QLVSAG
Trigger: GCCTGCAGAGACAAGCTGGCACAGGGCGAGGGGTGG...TGAATGGCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCACCCAGAGACAGGGCTaGCCTGCTGCGGTAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLTQRQG*PAAVGP
Trigger: GGGCCCTACCGCAGCAGGGCAGCCCTGTCTCTGGGT...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCCACTCCTTAAAGGCATaGCTGCAGAGAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGHSLKA*LQRAWA
Trigger: GGCCCAGGCTCTCTGCAGCCATGCCTTTAAGGAGTG...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp AGGGTCCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGCAGGCAGGGATGCCTaGGGGTGCCAGACGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RVPAPNPTAGPLGTSIHRAGRDA*GCQTWL
Trigger: CAGCCACGTCTGGCACCCCCAGGCATCCCTGCCTGC...CCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGGACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp CCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCCTGCTTGGCGGTGGGTaGGCTGCCATCCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: PSTKPHSWTTWDLNPQGALLGGG*AAILIL
Trigger: GAGAATGAGGATGGCAGCTCACCCACCGCCAAGCAG...GGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCATCCAGGAAAGCCCTTaGAGACTGAGGGGCGCTTTG +
Preference number: 4 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGIQESP*RLRGAL
Trigger: CAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGGAT...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGGCTGCTCTGTCAGCATaGGGCAGTGAGCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQAALSA*GSEQGS
Trigger: AGAGCCCTGCTCACTGCCTCATGCTGACAGAGCAGC...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGGGTGCCAGACGTGGCTaGGATGTTTCTGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQGARRG*DVSAEG
Trigger: CCCCTCTGCAGAAACATCTCAGCCACGTCTGGCACC...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGCCCTACTGGCTGAGGTaGAGGCTGGTGCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQPYWLR*RLVPRE
Trigger: CTCTCTTGGCACCAGCCTGCACCTCAGCCAGTAGGG...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CGTACAGGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCACCCCAGCCACTGCCTaGCTGTGGATGGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RTGPGQWEWEPLGEGASGTPATA*LWMGFW
Trigger: CCAGAAACCCATCCACAGGCAGGCAGTGGCTGGGGT...GCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCCTGTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CTGGGCAAAGGCCCCAAGATGGGAAAGCCTTGGTGGTTGGGGCATAGAATGGGGGAGCCAGTAGCCCAGTaGTGCTTGGGGGCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: LGKGPKMGKPWWLGHRMGEPVAQ*CLGAGA
Trigger: CGCCCCTGCCCCCAAGCAGCACTGGGCTACTGGCTC...CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCATCTTGGGGCCTTTGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGCCTCTCTGCTTACCTTaGTCCCACCCCCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQPLCLP*SHPQLW
Trigger: CCAGAGCTGGGGGTGGGAGCAAGGTAAGCAGAGAGG...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGTGGCAGTCCAGGGTGTaGCTCTGGTTCTCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQWQSRV*LWFSVP
Trigger: GGGCACAGAGAACCAGAGCCACACCCTGGACTGCCA...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCAGCACAAGGGTGACCTaGCAGTCCAGGGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PSTKPHSWTTWDLNPQGASTRVT*QSRVWL
Trigger: GAGCCACACCCTGGACTGCCAGGTCACCCTTGTGCT...GGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCTCTCACCGTGGAGTGTaGCCAGTGGACAGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGSHRGV*PVDRAV
Trigger: TACTGCTCTGTCCACTGGCCACACTCCACGGTGAGA...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CGTACAGGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCTATGCGGTCTCTCCTaGGAGAGGGGGCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RTGPGQWEWEPLGEGASGLCGLS*ERGLCL
Trigger: CAAGCAGAGCCCCCTCTCCCAGGAGAGACCGCATAG...GCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCCTGTACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGCCAGGCCAATGGGAGTaGGAACCCTTGGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQPGQWE*EPLGEG
Trigger: TCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGG...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CGTACAGGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCGCTGAGGTCCTGTGGTaGAGAAGGCCTGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RTGPGQWEWEPLGEGASGAEVLW*RRPGAE
Trigger: CTCTGCTCCAGGCCTTCTCCACCACAGGACCTCAGC...GCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCCTGTACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGGAGCCACTGTCCCCATaGGGCTTGAGCTTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQEPLSP*GLSFCL
Trigger: GAGGCAGAAGCTCAAGCCCCATGGGGACAGTGGCTC...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp GGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCATTCAGGGCAGCCCACACGGTaGGGTGGGAAGATTGACCTG +
Preference number: 4 (lower is better)
Translates to: GPGQWEWEPLGEGASGHSGQPTR*GGKIDL
Trigger: CAGGTCAATCTTCCCACCCCACCGTGTGGGCTGCCC...TGAATGGCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CACATCCGTCCGTCCTGGAAGGTCCACAGCTCCCCTTCACCTAGGCCTCACCTAGGGCACATTTGGGGTTaGGGCAGCCCACACGGTGGG +
Preference number: 4 (lower is better)
Translates to: HIRPSWKVHSSPSPRPHLGHIWG*GSPHGG
Trigger: CCCACCGTGTGGGCTGCCCCAACCCCAAATGTGCCC...TAGGTGAGGCCTAGGTGAAGGGGAGCTGTGGACCTTCCAGGACGGACGGATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGCACATCCGTCCGTCCTaGAAGGTCCACAGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQHIRPS*KVHSSP
Trigger: AGGGGAGCTGTGGACCTTCCAGGACGGACGGATGTG...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCCTGGGCCGGGAGAGATaGTGGGAAATCCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: PSTKPHSWTTWDLNPQGALGRER*WEIPPG
Trigger: ACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAG...GGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCCTGCAGAGGGGAGGTTaGGAAGACCTAGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PSTKPHSWTTWDLNPQGALQRGG*EDLGGQ
Trigger: CTGCCCTCCTAGGTCTTCCCAACCTCCCCTCTGCAG...GGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTGGCTGCCCTACTGGCTaGGGTGCAGGCTGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSGCPTG*GAGWCQ
Trigger: TTGGCACCAGCCTGCACCTCAGCCAGTAGGGCAGCC...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp CTGGGCAAAGGCCCCAAGATGGGAAAGCCTTGGTGGTTGGGGCATAGAATGGGGTGTCCCCCATTGCCCTaGCCCTTGCCCCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LGKGPKMGKPWWLGHRMGCPPLP*PLPPPP
Trigger: AGGAGGTGGGGGCAAGGGTCAGGGCAATGGGGGACA...CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCATCTTGGGGCCTTTGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCCCAGGGTCTAGGAGCTaGGGTCAGAGAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLPGSRS*GQRGPG
Trigger: TCCTGGGCCTCTCTGACCTCAGCTCCTAGACCCTGG...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp CCAGGAAAGCCCTTGAAGACTGAGGGGCGCTTTGCTGGTTGGGCCAAGGGAGGACCTGGCCTGTCCATCTaGTCGTGCTACCCCGTAGGC +
Preference number: 4 (lower is better)
Translates to: PGKPLKTEGRFAGWAKGGPGLSI*SCYPVG
Trigger: GCCTACGGGGTAGCACGATCAGATGGACAGGCCAGG...TCCTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp CCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCGGTGGGGTTGGAGGCTaGAACCCATTGAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: PSTKPHSWTTWDLNPQGAGGVGG*NPLKGS
Trigger: TGACCCCTTCAATGGGTTTCAGCCTCCAACCCCACC...GGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp CACATCCGTCCGTCCTGGAAGGTCCACAGCTCCCCTTCACCTAGGCCTCACCTATCAGAGAGTCTGGCCTaGCCCGCGCTCAGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: HIRPSWKVHSSPSPRPHLSESLA*PALSQG
Trigger: GCCTTGACTGAGCGCGGGTCAGGCCAGACTCTCTGA...TAGGTGAGGCCTAGGTGAAGGGGAGCTGTGGACCTTCCAGGACGGACGGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGGGGGGCCTGCTTGTCTaGGGCGACTCTTTAGTTCAC +
Preference number: 4 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQGGLLV*GDSLVH
Trigger: GTGAACTAAAGAGTCGCCGCAGACAAGCAGGCCCCC...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CTGGGCAAAGGCCCCAAGATGGGAAAGCCTTGGTGGTTGGGGCATAGAATGGGGGGTGCCAGTGGCCGATaGTCCCGGCAGCACAAGGGT +
Preference number: 4 (lower is better)
Translates to: LGKGPKMGKPWWLGHRMGGASGR*SRQHKG
Trigger: ACCCTTGTGCTGCCGGGAGCATCGGCCACTGGCACC...CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCATCTTGGGGCCTTTGCCCAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTTGGGAGAGGGGGCTCTaGTTGGCGGTGGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSWERGL*LAVGEL
Trigger: CAGCTCACCCACCGCCAAGCAGAGCCCCCTCTCCCA...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CTGGGCAAAGGCCCCAAGATGGGAAAGCCTTGGTGGTTGGGGCATAGAATGGGGACTGCTAGGCGCCCCTaGAGGGTCCTCCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LGKGPKMGKPWWLGHRMGTARRP*RVLPQL
Trigger: GAGCTGAGGGAGGACCCTGCAGGGGCGCCTAGCAGT...CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCATCTTGGGGCCTTTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCCCCAGGGGAGCTCACTaGACCCTGAGCGGCATTGTC +
Preference number: 4 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLPRGAH*TLSGIV
Trigger: GACAATGCCGCTCAGGGTGCAGTGAGCTCCCCTGGG...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGCTTCCCTCACCTCTCTaGTTACCTTGCTCCCACCCC +
Preference number: 4 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQLPSPL*LPCSHP
Trigger: GGGGTGGGAGCAAGGTAAGCAGAGAGGTGAGGGAAG...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp GGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCATTCAAGGGATGCCTGGGGGTaGCAGACGTGGCTGAGATGT +
Preference number: 4 (lower is better)
Translates to: GPGQWEWEPLGEGASGHSRDAWG*QTWLRC
Trigger: ACATCTCAGCCACGTCTGGCACCCCCAGGCATCCCT...TGAATGGCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CCAGGAAAGCCCTTGAAGACTGAGGGGCGCTTTGCTGGTTGGGCCAAGGGAGGAGTGGCCAAAGAGCACTaGCTACCCTGGCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PGKPLKTEGRFAGWAKGGVAKEH*LPWPRP
Trigger: TGGCCTCGGCCAGGGTAGGCAGTGCTCTTTGGCCAC...TCCTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp AGGGTCCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGCTGGTTCTCCATCTaGGGGCCTGCTTGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: RVPAPNPTAGPLGTSIHRGWFSI*GPACLR
Trigger: CCGCAGACAAGCAGGCCCCCAGATGGAGAACCAGCC...CCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp GGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCATTCAAGTAGTAGGTGCCAGTaGCCGATGCTCCCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GPGQWEWEPLGEGASGHSSSRCQ*PMLPAA
Trigger: TGCTGCCGGGAGCATCGGCCACTGGCACCTACTACT...TGAATGGCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CACATCCGTCCGTCCTGGAAGGTCCACAGCTCCCCTTCACCTAGGCCTCACCTACGCTGCCTCTCACCGTaGAGTGTGGCCAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: HIRPSWKVHSSPSPRPHLRCLSP*SVASGQ
Trigger: CTGTCCACTGGCCACACTCCACGGTGAGAGGCAGCG...TAGGTGAGGCCTAGGTGAAGGGGAGCTGTGGACCTTCCAGGACGGACGGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCGGCAGATCTTGGATCTaGGCACTTCCTGGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PSTKPHSWTTWDLNPQGAGRSWI*ALPGGV
Trigger: GACCCCACCAGGAAGTGCCCAGATCCAAGATCTGCC...GGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCAGGAAAGCCCTTGAAGACTGAGGGGCGCTTTGCTGGTTGGGCCAAGGGAGGAGATCAAGTCCTTTGGTaGCAGGGGCTGCCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: PGKPLKTEGRFAGWAKGGDQVLW*QGLPRS
Trigger: GGACCGGGGCAGCCCCTGCCACCAAAGGACTTGATC...TCCTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CGTACAGGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCTCTCAGCCATGTCCTaGGCCTCCAGATCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: RTGPGQWEWEPLGEGASGLSAMS*ASRSVP
Trigger: AGGGACAGATCTGGAGGCCCAGGACATGGCTGAGAG...GCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCCTGTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGTGGGGGACTCCACCTTaGGTAGAAGGAGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQWGTPP*VEGGTA
Trigger: AGCTGTCCCTCCTTCTACCCAAGGTGGAGTCCCCCA...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCAGGAAAGCCCTTGAAGACTGAGGGGCGCTTTGCTGGTTGGGCCAAGGGAGGACTCCCTGGGCACATTTaGGGTTGGGGCAGCCCACAC +
Preference number: 4 (lower is better)
Translates to: PGKPLKTEGRFAGWAKGGLPGHI*GWGSPH
Trigger: GTGTGGGCTGCCCCAACCCCAAATGTGCCCAGGGAG...TCCTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CACATCCGTCCGTCCTGGAAGGTCCACAGCTCCCCTTCACCTAGGCCTCACCTAGCAGGCCCAGTGAGGTaGCCCTCTCCTGGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: HIRPSWKVHSSPSPRPHLAGPVR*PSPGLA
Trigger: AGCAAGACCAGGAGAGGGCCACCTCACTGGGCCTGC...TAGGTGAGGCCTAGGTGAAGGGGAGCTGTGGACCTTCCAGGACGGACGGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCAGGAAAGCCCTTGAAGACTGAGGGGCGCTTTGCTGGTTGGGCCAAGGGAGGAGCAGGCTCTCAGTCCTaGGGGCTGGAGAACAGGTGC +
Preference number: 4 (lower is better)
Translates to: PGKPLKTEGRFAGWAKGGAGSQS*GLENRC
Trigger: GCACCTGTTCTCCAGCCCCCAGGACTGAGAGCCTGC...TCCTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CGTACAGGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCAAGTTCAGAGAGTCTaGCCTGACCCGCGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: RTGPGQWEWEPLGEGASGQVQRV*PDPRSV
Trigger: GACTGAGCGCGGGTCAGGCCAGACTCTCTGAACTTG...GCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCCTGTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CAA 72 bp CAGGGCTCTGGGCAAGGGTGGCATCCAGGAAAGCCCTaGAAGACTGAGGGGCGCTTTGCTGGTTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QGSGQGWHPGKP*KTEGRFAGWAK
Trigger: CTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGGATGCCACCCTTGCCCAGAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CAA 72 bp CTCTCCTCCTCCTCCTCCTCCTCCCTGCCTCTCTCCTaGCTCACTGAAGACCTCAGCACCCACTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LSSSSSSSLPLS*LTEDLSTHCLP
Trigger: TGGGAGGCAGTGGGTGCTGAGGTCTTCAGTGAGCAAGGAGAGAGGCAGGGAGGAGGAGGAGGAGGAGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCCCAGGGCAAGCTCTATaGGCGGTGGAGCCCATCCTA +
Preference number: 4 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLPGQAL*AVEPIL
Trigger: TAGGATGGGCTCCACCGCTCATAGAGCTTGCCCTGG...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTATGCCCCCAGCCTGCTaGCCACCTCTCAGCCATGTC +
Preference number: 4 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSMPPAC*PPLSHV
Trigger: GACATGGCTGAGAGGTGGTCAGCAGGCTGGGGGCAT...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp GGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCATTCACCACTACGCCTGGCCTaGGCTGTCTTGACTGTCACT +
Preference number: 4 (lower is better)
Translates to: GPGQWEWEPLGEGASGHSPLRLA*AVLTVT
Trigger: AGTGACAGTCAAGACAGCTCAGGCCAGGCGTAGTGG...TGAATGGCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCCAGAGCAGTAGTAGGTaGCAGTGGCCGATGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLQSSSR*QWPMLP
Trigger: CGGGAGCATCGGCCACTGGCACCTACTACTGCTCTG...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGGATGCTGCTTGGGGCTaGTGGCAGATCTTGGATCTG +
Preference number: 4 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQDAAWG*WQILDL
Trigger: CAGATCCAAGATCTGCCAGCAGCCCCAAGCAGCATC...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CGTACAGGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCGCCCTCACCCCAACATaGCAGAATCTCCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: RTGPGQWEWEPLGEGASGALTPT*QNLLPL
Trigger: GAGAGGAAGGAGATTCTGGCATGTTGGGGTGAGGGC...GCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCCTGTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CACATCCGTCCGTCCTGGAAGGTCCACAGCTCCCCTTCACCTAGGCCTCACCTAACAGGGGGCCAGGGCTaGGGCCTATGGCAGATAAAG +
Preference number: 4 (lower is better)
Translates to: HIRPSWKVHSSPSPRPHLTGGQG*GLWQIK
Trigger: CTTTATCTGCCATAGGCCGCAGCCCTGGCCCCCTGT...TAGGTGAGGCCTAGGTGAAGGGGAGCTGTGGACCTTCCAGGACGGACGGATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp AGGGTCCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGCAGCTTTCCCTTCCCTaGAGGGAGGGGCATGACCTG +
Preference number: 4 (lower is better)
Translates to: RVPAPNPTAGPLGTSIHRQLSLP*REGHDL
Trigger: CAGGTCATGCCCCTCCCTGCAGGGAAGGGAAAGCTG...CCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CGTACAGGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCCCTGCCTCTCTCCTTaGTCACTGAAGACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RTGPGQWEWEPLGEGASGPCLSP*SLKTSA
Trigger: TGCTGAGGTCTTCAGTGAGCAAGGAGAGAGGCAGGG...GCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCCTGTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTCTCCCGCCTGCCCCATaGACCTCCCACCCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSLPPAP*TSHPEV
Trigger: AACTTCAGGGTGGGAGGTGCATGGGGCAGGCGGGAG...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CTGGGCAAAGGCCCCAAGATGGGAAAGCCTTGGTGGTTGGGGCATAGAATGGGGCACCCACTGAGCTTCTaGCTGAGCCAGGGAGTCCCC +
Preference number: 4 (lower is better)
Translates to: LGKGPKMGKPWWLGHRMGHPLSF*LSQGVP
Trigger: GGGGACTCCCTGGCTCAGGCAGAAGCTCAGTGGGTG...CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCATCTTGGGGCCTTTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCACGGCCCACCTCTCCTaGATAAGCTGTCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PSTKPHSWTTWDLNPQGATAHLS*ISCLPR
Trigger: TCTTGGCAGACAGCTTATGCAGGAGAGGTGGGCCGT...GGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CTGGGCAAAGGCCCCAAGATGGGAAAGCCTTGGTGGTTGGGGCATAGAATGGGGCGCCACCTCACAGGCTaGTTCTCCATCTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LGKGPKMGKPWWLGHRMGRHLTG*FSIWGP
Trigger: AGGCCCCCAGATGGAGAACCAGCCTGTGAGGTGGCG...CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCATCTTGGGGCCTTTGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTGGTGGGGTCCTTCCCTaGACCCCGCATCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSGGVLP*TPHPLL
Trigger: AAGAAGCGGATGCGGGGTCCAGGGAAGGACCCCACC...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCGATCTGGGCACTTCCTaGTGGGGTCCTTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLDLGTS*WGPSLD
Trigger: GTCCAGGGAAGGACCCCACCAGGAAGTGCCCAGATC...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CGTACAGGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCGCTGCTGGCAGATCTTaGATCTGGGCACTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RTGPGQWEWEPLGEGASGAAGRS*IWALPG
Trigger: ACCAGGAAGTGCCCAGATCCAAGATCTGCCAGCAGC...GCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCCTGTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTCAGAGGCTGCCCTACTaGCTGAGGTGCAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSQRLPY*LRCRLV
Trigger: CACCAGCCTGCACCTCAGCCAGTAGGGCAGCCTCTG...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCAGGAAAGCCCTTGAAGACTGAGGGGCGCTTTGCTGGTTGGGCCAAGGGAGGAGCCCCTGTGCACACCTaGCAGCTTCACCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: PGKPLKTEGRFAGWAKGGAPVHT*QLHLPK
Trigger: TTTGGGGAGGTGAAGCTGCCAGGTGTGCACAGGGGC...TCCTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp GGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCATTCACTCTCCTGGTCTTGCTaGCTTCGGTTTTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GPGQWEWEPLGEGASGHSLSWSC*LRFSQG
Trigger: CCCCTGGGAAAACCGAAGCCAGCAAGACCAGGAGAG...TGAATGGCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp AGGGTCCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGAGCTCTGGGCAGCCCTaGCCTGTCCATCTGATCGTG +
Preference number: 4 (lower is better)
Translates to: RVPAPNPTAGPLGTSIHRSSGQP*PVHLIV
Trigger: CACGATCAGATGGACAGGCCAGGGCTGCCCAGAGCT...CCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTTGGGCCAAAGCCCTTGAGCACTGCCTACCCTaGCCGAGGCCACCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: PTEVSEHSCPTLPWAKALEHCLP*PRPPGS
Trigger: TGAGCCTGGTGGCCTCGGCCAGGGTAGGCAGTGCTC...AAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTTGGGCCAAAGCCCTTGCCACTCAGCCTGGCTaGACTGAGCCAACGGCCCAC +
Preference number: 4 (lower is better)
Translates to: PTEVSEHSCPTLPWAKALATQPG*TEPTAH
Trigger: GTGGGCCGTTGGCTCAGTCCAGCCAGGCTGAGTGGC...AAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp CTGGGCAAAGGCCCCAAGATGGGAAAGCCTTGGTGGTTGGGGCATAGAATGGGGCACTCAGGAGGCCGGTaGAGCCAAAGAGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LGKGPKMGKPWWLGHRMGHSGGR*SQRAGA
Trigger: AGCTCCTGCTCTTTGGCTTCACCGGCCTCCTGAGTG...CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCATCTTGGGGCCTTTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp CACATCCGTCCGTCCTGGAAGGTCCACAGCTCCCCTTCACCTAGGCCTCACCTACCAAAGGTGCTTCTGTaGGCCAGTAGCCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: HIRPSWKVHSSPSPRPHLPKVLL*ASSPVL
Trigger: CAGCACTGGGCTACTGGCTCACAGAAGCACCTTTGG...TAGGTGAGGCCTAGGTGAAGGGGAGCTGTGGACCTTCCAGGACGGACGGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp CTGGGCAAAGGCCCCAAGATGGGAAAGCCTTGGTGGTTGGGGCATAGAATGGGGGAGCTCACTGCACCCTaGGCGGCATTGTCCCCCATT +
Preference number: 4 (lower is better)
Translates to: LGKGPKMGKPWWLGHRMGELTAP*AALSPI
Trigger: AATGGGGGACAATGCCGCTCAGGGTGCAGTGAGCTC...CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCATCTTGGGGCCTTTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp CTGGGCAAAGGCCCCAAGATGGGAAAGCCTTGGTGGTTGGGGCATAGAATGGGGGAGGGAAGCATCAGCTaGGACCCAGAGACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LGKGPKMGKPWWLGHRMGEGSIS*DPETGL
Trigger: CAGCCCTGTCTCTGGGTCTCAGCTGATGCTTCCCTC...CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCATCTTGGGGCCTTTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CTGGGCAAAGGCCCCAAGATGGGAAAGCCTTGGTGGTTGGGGCATAGAATGGGGCTCCATCTGGGGGCCTaGTTGTCTGCGGCGACTCTT +
Preference number: 4 (lower is better)
Translates to: LGKGPKMGKPWWLGHRMGLHLGA*LSAATL
Trigger: AAGAGTCGCCGCAGACAAGCAGGCCCCCAGATGGAG...CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCATCTTGGGGCCTTTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCGATTCTGAAGGATGCTaGTTGGGGCTGCTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: PSTKPHSWTTWDLNPQGADSEGC*LGLLAD
Trigger: ATCTGCCAGCAGCCCCAAGCAGCATCCTTCAGAATC...GGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp AGGGTCCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGTGGCGGTGGGTGAGCTaGCATCCTCATTCTCGATGC +
Preference number: 4 (lower is better)
Translates to: RVPAPNPTAGPLGTSIHRWRWVS*HPHSRC
Trigger: GCATCGAGAATGAGGATGGCAGCTCACCCACCGCCA...CCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CTGGGCAAAGGCCCCAAGATGGGAAAGCCTTGGTGGTTGGGGCATAGAATGGGGTGGGGCTTGAGCTTCTaGCTCAGAGGGACCTTCCGG +
Preference number: 4 (lower is better)
Translates to: LGKGPKMGKPWWLGHRMGWGLSF*LRGTFR
Trigger: CCGGAAGGTCCCTCTGAGGCAGAAGCTCAAGCCCCA...CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCATCTTGGGGCCTTTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCACTGCCTCCCAGCCTTaGCCTGAACCAAGCACAGAC +
Preference number: 4 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLTASQP*PEPSTD
Trigger: GTCTGTGCTTGGTTCAGGGCAAGGCTGGGAGGCAGT...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CCAGGAAAGCCCTTGAAGACTGAGGGGCGCTTTGCTGGTTGGGCCAAGGGAGGAGGTCCCGTCCTTTCATaGTGTGCTCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PGKPLKTEGRFAGWAKGGGPVLS*CALLLL
Trigger: GAGGAGGAGGAGAGCACAGCATGAAAGGACGGGACC...TCCTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CACATCCGTCCGTCCTGGAAGGTCCACAGCTCCCCTTCACCTAGGCCTCACCTAGCTGGTGTGCAGTGGTaGCACTTCGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: HIRPSWKVHSSPSPRPHLAGVQW*HFGSLQ
Trigger: TTGCAGTGAGCCGAAGTGGCACCACTGCACACCAGC...TAGGTGAGGCCTAGGTGAAGGGGAGCTGTGGACCTTCCAGGACGGACGGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp AGGGTCCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGATGATGGGGTGTCCCTaGGGGCCTTACTCCCAACTC +
Preference number: 4 (lower is better)
Translates to: RVPAPNPTAGPLGTSIHRMMGCP*GPYSQL
Trigger: GAGTTGGGAGTAAGGCCCCCAGGGACACCCCATCAT...CCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTTGGGCCAAAGCCCTTGGGAGTGGGAACCCTTaGGAGAGGGAGCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PTEVSEHSCPTLPWAKALGSGNP*ERELQA
Trigger: GGCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCC...AAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCCAGGGCTGCGGCCTATaGCAGATAAAGATAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PSTKPHSWTTWDLNPQGAQGCGL*QIKIEE
Trigger: CTCCTCTATCTTTATCTGCCATAGGCCGCAGCCCTG...GGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp GGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCATTCAAGACGACCACCACGCTaGCAATGTCTCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: GPGQWEWEPLGEGASGHSRRPPR*QCLCPP
Trigger: TGGTGGACAGAGACATTGCCAGCGTGGTGGTCGTCT...TGAATGGCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp GGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCATTCATGGGGGTGCCAGACGTaGCTGAGATGTTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GPGQWEWEPLGEGASGHSWGCQT*LRCFCR
Trigger: TCTGCAGAAACATCTCAGCCACGTCTGGCACCCCCA...TGAATGGCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCGGAAGCCCCCTCAGGTaGACAAATGACATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLGSPLR*TNDIPW
Trigger: CCAGGGGATGTCATTTGTCCACCTGAGGGGGCTTCC...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp CCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCTGTGTAGACAGATTCTaGAGGATGCTGCTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PSTKPHSWTTWDLNPQGACVDRF*RMLLGA
Trigger: AGCCCCAAGCAGCATCCTTCAGAATCTGTCTACACA...GGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp GGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCATTCAAAGACTGGAAAATGCTaGGTCCCAGCCAAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: GPGQWEWEPLGEGASGHSKTGKC*VPAKGP
Trigger: TGGACCCTTGGCTGGGACTCAGCATTTTCCAGTCTT...TGAATGGCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp CACATCCGTCCGTCCTGGAAGGTCCACAGCTCCCCTTCACCTAGGCCTCACCTACCTGGAAATGTTTGCTaGGGAGGGGCCACCGTTTAC +
Preference number: 4 (lower is better)
Translates to: HIRPSWKVHSSPSPRPHLPGNVC*GGATVY
Trigger: GTAAACGGTGGCCCCTCCTCAGCAAACATTTCCAGG...TAGGTGAGGCCTAGGTGAAGGGGAGCTGTGGACCTTCCAGGACGGACGGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CACATCCGTCCGTCCTGGAAGGTCCACAGCTCCCCTTCACCTAGGCCTCACCTAGCCAAGAGAGCATGCTaGTCTGTCAGCATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HIRPSWKVHSSPSPRPHLAKRAC*SVSMRQ
Trigger: CTGCCTCATGCTGACAGAGCAGCATGCTCTCTTGGC...TAGGTGAGGCCTAGGTGAAGGGGAGCTGTGGACCTTCCAGGACGGACGGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCGGTGCCAAGAGAGCATaGTGCTCTGTCAGCATGAGG +
Preference number: 4 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLGAKRA*CSVSMR
Trigger: CCTCATGCTGACAGAGCAGCATGCTCTCTTGGCACC...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp TTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGTGCCTGGCTGCCTCGTaGCTCTGGCCCAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: FFSSLLHPFIVESKPAPQCLAAS*LWPSWV
Trigger: TACCCAGCTGGGCCAGAGGCACGAGGCAGCCAGGCA...CTGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CACATCCGTCCGTCCTGGAAGGTCCACAGCTCCCCTTCACCTAGGCCTCACCTACGTCCTTTCATGCTGTaGTCTCCTCCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HIRPSWKVHSSPSPRPHLRPFML*SPPPPP
Trigger: AGGAGGAGGAGGAGGAGAGCACAGCATGAAAGGACG...TAGGTGAGGCCTAGGTGAAGGGGAGCTGTGGACCTTCCAGGACGGACGGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CTGGGCAAAGGCCCCAAGATGGGAAAGCCTTGGTGGTTGGGGCATAGAATGGGGGTCTCAGAACATTCTTaGCCCACCCTCCCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LGKGPKMGKPWWLGHRMGVSEHS*PTLPWA
Trigger: GGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGAC...CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCATCTTGGGGCCTTTGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CCAGGAAAGCCCTTGAAGACTGAGGGGCGCTTTGCTGGTTGGGCCAAGGGAGGAAGTGGAAAGCAAGCCTaGACCCCAGGAGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: PGKPLKTEGRFAGWAKGGSGKQA*TPGAPI
Trigger: AATGGGAGCTCCTGGGGTGCAGGCTTGCTTTCCACT...TCCTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp GCAGAGGTAGGTCAGAGAATCAGGGCTTTGGTGATGGGCTCACTCATAACTTTTAGGGCGTGGGAGGCCTaGCAGGGCCCGCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: AEVGQRIRALVMGSLITFRAWEA*QGPPPH
Trigger: GTGAGGTGGCGGGCCCTGCCAGGCCTCCCACGCCCT...AAAAGTTATGAGTGAGCCCATCACCAAAGCCCTGATTCTCTGACCTACCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355469.4
CDS-3UTR CCA 90 bp CCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTTGGGCCAAAGCCCTTATGGGCAGGCCGGTGTaGGTCACTGACTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PTEVSEHSCPTLPWAKALMGRPV*VTDCPP
Trigger: AGGAGGACAGTCAGTGACCCACACCGGCCTGCCCAT...AAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CTGGGCAAAGGCCCCAAGATGGGAAAGCCTTGGTGGTTGGGGCATAGAATGGGGCACAGCTGGACCACTTaGGACCTCAATCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: LGKGPKMGKPWWLGHRMGHSWTT*DLNPQG
Trigger: CCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTG...CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCATCTTGGGGCCTTTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTCTGTGGATGGGTTTCTaGCCACGGTGCAGGGCTACT +
Preference number: 4 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSLWMGF*PRCRAT
Trigger: AGTAGCCCTGCACCGTGGCCAGAAACCCATCCACAG...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp CCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTTGGGCCAAAGCCCTTAATGTGAGGGTGAAATaGTGGGGTGTCCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PTEVSEHSCPTLPWAKALNVRVK*WGVPGG
Trigger: GCCCCCAGGGACACCCCATCATTTCACCCTCACATT...AAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTCTGCAATATTGGCTGTaGAGGGAACCCCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSLQYWL*REPQPH
Trigger: GTGTGGCTGGGGTTCCCTTCACAGCCAATATTGCAG...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp GGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCATTCATCATCTTCGAATCTATaGGGTCTCTCCTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GPGQWEWEPLGEGASGHSSSSNL*GLSWER
Trigger: CCTCTCCCAGGAGAGACCGCATAGATTCGAAGATGA...TGAATGGCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CACATCCGTCCGTCCTGGAAGGTCCACAGCTCCCCTTCACCTAGGCCTCACCTAGTTTACCGCACCCACTaGAAGTTCTGGACTGGTGGT +
Preference number: 4 (lower is better)
Translates to: HIRPSWKVHSSPSPRPHLVYRTH*KFWTGG
Trigger: ACCACCAGTCCAGAACTTGCAGTGGGTGCGGTAAAC...TAGGTGAGGCCTAGGTGAAGGGGAGCTGTGGACCTTCCAGGACGGACGGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CTGGGCAAAGGCCCCAAGATGGGAAAGCCTTGGTGGTTGGGGCATAGAATGGGGGACATCCCCTGGCATTaGAAGGAATGGAGTGACGCC +
Preference number: 4 (lower is better)
Translates to: LGKGPKMGKPWWLGHRMGDIPWH*KEWSDA
Trigger: GGCGTCACTCCATTCCTTGCAATGCCAGGGGATGTC...CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCATCTTGGGGCCTTTGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp AGGGTCCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGAGGGTGGCAGTTTGTTaGCTTCTTAGGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RVPAPNPTAGPLGTSIHRRVAVC*LLRAPL
Trigger: CAGAGGAGCCCTAAGAAGCCAACAAACTGCCACCCT...CCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCATGGGAAAGCCTTGGTaGTTGGGGCATAGAATGGGG +
Preference number: 4 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLMGKPW*LGHRMG
Trigger: CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCAT...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCAAGATGGGAAAGCCTTaGTGGTTGGGGCATAGAATG +
Preference number: 4 (lower is better)
Translates to: PSTKPHSWTTWDLNPQGAKMGKP*WLGHRM
Trigger: CATTCTATGCCCCAACCACCAAGGCTTTCCCATCTT...GGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTGCAAAGGCCCCAAGATaGGAAAGCCTTGGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSAKAPR*ESLGGW
Trigger: CCAACCACCAAGGCTTTCCCATCTTGGGGCCTTTGC...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCAGGAAAGCCCTTGAAGACTGAGGGGCGCTTTGCTGGTTGGGCCAAGGGAGGAAGACAGAAGGGACTTTaGGGGACTCCACCTTGGGTA +
Preference number: 4 (lower is better)
Translates to: PGKPLKTEGRFAGWAKGGRQKGL*GTPPWV
Trigger: TACCCAAGGTGGAGTCCCCCAAAGTCCCTTCTGTCT...TCCTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCAGGAAAGCCCTTGAAGACTGAGGGGCGCTTTGCTGGTTGGGCCAAGGGAGGAACCAAACCCCACAGCTaGACCACTTGGGACCTCAAT +
Preference number: 4 (lower is better)
Translates to: PGKPLKTEGRFAGWAKGGTKPHS*TTWDLN
Trigger: ATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGT...TCCTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CTGGGCAAAGGCCCCAAGATGGGAAAGCCTTGGTGGTTGGGGCATAGAATGGGGACCCACTGCAAGTTCTaGACTGGTGGTAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGKGPKMGKPWWLGHRMGTHCKF*TGGRGW
Trigger: CCAGCCTCTACCACCAGTCCAGAACTTGCAGTGGGT...CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCATCTTGGGGCCTTTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCAGGAAAGCCCTTGAAGACTGAGGGGCGCTTTGCTGGTTGGGCCAAGGGAGGAGCTGCCAGAATCCCCTaGAAATGTTTGCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PGKPLKTEGRFAGWAKGGAARIP*KCLLRR
Trigger: CCTCCTCAGCAAACATTTCCAGGGGATTCTGGCAGC...TCCTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCGTTTGTGACACTGGGTaGCCAAAGAGCACTGCCTAC +
Preference number: 4 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLVCDTG*PKSTAY
Trigger: GTAGGCAGTGCTCTTTGGCCACCCAGTGTCACAAAC...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CAA 72 bp TGTCCTGGGCCTCCAGATCTGTCCCTGATCCTAGTCTaGCCTCTGAGGGGTCCATCATCCTTGTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: CPGPPDLSLILV*PLRGPSSLSVP
Trigger: GGGGACAGACAAGGATGATGGACCCCTCAGAGGCAAGACTAGGATCAGGGACAGATCTGGAGGCCCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGTGCCCATTTTACAAATaGGCAAAGGTGGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQCPFYK*AKVGEL
Trigger: GAGTTCTCCCACCTTTGCTCATTTGTAAAATGGGCA...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp AGGGTCCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGCTGAAGGACGAGTCTTaGAGGAAATGCACACCCACT +
Preference number: 4 (lower is better)
Translates to: RVPAPNPTAGPLGTSIHRLKDES*RKCTPT
Trigger: AGTGGGTGTGCATTTCCTTCAAGACTCGTCCTTCAG...CCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CGCAGAGGTAGGTCAGAGAATCAGGGCTTTGGTGATGGGCTCACTCATAACTTTGGTGCCAGTGGCCGATaGTCCCGGCAGCACAAGGGT +
Preference number: 4 (lower is better)
Translates to: RRGRSENQGFGDGLTHNFGASGR*SRQHKG
Trigger: ACCCTTGTGCTGCCGGGAGCATCGGCCACTGGCACC...AAAGTTATGAGTGAGCCCATCACCAAAGCCCTGATTCTCTGACCTACCTCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355469.4
CDS-3UTR GCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCCATCCTCATTCTCGATaGAGGCATAGACCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLHPHSR*RHRPRS
Trigger: AGACCGAGGTCTATGCCTGCATCGAGAATGAGGATG...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTCTGCAGAACCAAAGGTaGTTCTGTGAGCCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSLQNQR*FCEPVA
Trigger: GGCTACTGGCTCACAGAAGCACCTTTGGTTCTGCAG...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CCAGGAAAGCCCTTGAAGACTGAGGGGCGCTTTGCTGGTTGGGCCAAGGGAGGACTCAGTCCTCTTTGCTaGCCACAGAAGTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: PGKPLKTEGRFAGWAKGGLSPLC*PQKSQN
Trigger: GTTCTGAGACTTCTGTGGGCAGCAAAGAGGACTGAG...TCCTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CCAGGAAAGCCCTTGAAGACTGAGGGGCGCTTTGCTGGTTGGGCCAAGGGAGGATGTCTTGACTGTCACTaGAAACTGAGGCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PGKPLKTEGRFAGWAKGGCLDCH*KLRLRW
Trigger: CCACCTGAGCCTCAGTTTGCAGTGACAGTCAAGACA...TCCTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCTTCCCATGGAAACTCTaGTGCCAGAATCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLFPWKL*CQNPLE
Trigger: TTCCAGGGGATTCTGGCAGCAGAGTTTCCATGGGAA...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp TTTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGAGCAGGAGCTTCTGTaGACTCTGCGGGGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: FLLFPPPPIHSGKQACTPEQELL*TLRGLS
Trigger: CGAGAGCCCCCGCAGAGTCCACAGAAGCTCCTGCTC...TGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp TTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGGCTGCTTGGGGCTGCTaGCAGATCTTGGATCTGGGC +
Preference number: 4 (lower is better)
Translates to: FFSSLLHPFIVESKPAPQAAWGC*QILDLG
Trigger: GCCCAGATCCAAGATCTGCCAGCAGCCCCAAGCAGC...CTGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGGCCACAGGGAGGAGTTaGAATTTTATTCCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQATGRS*NFIPSE
Trigger: CTCACTTGGAATAAAATTCCAACTCCTCCCTGTGGC...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTGCCACCCAGCCTGGGTaGGTCTCAAAAGCAATTTTC +
Preference number: 4 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSATQPG*VSKAIF
Trigger: GAAAATTGCTTTTGAGACCCACCCAGGCTGGGTGGC...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTTGGGCCAAAGCCCTTAAGTCCACAAGGCTGTaGGAGGTGGAGCAGGGATTC +
Preference number: 4 (lower is better)
Translates to: PTEVSEHSCPTLPWAKALKSTRL*EVEQGF
Trigger: GAATCCCTGCTCCACCTCCCACAGCCTTGTGGACTT...AAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTAAACTGAGGCTCAGGTaGCCAGTGACTTGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSKLRLR*PVTCPS
Trigger: ACTTGGGCAAGTCACTGGCCACCTGAGCCTCAGTTT...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp GATCATCACTCCTTTGAGAATGTGATGAAAACTGGCTGGGTGTGCTGGCTCATGCCGGCAGCACAAGGGTaGCCTGGCAGTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: DHHSFENVMKTGWVCWLMPAAQG*PGSPGC
Trigger: ACACCCTGGACTGCCAGGTCACCCTTGTGCTGCCGG...CATGAGCCAGCACACCCAGCCAGTTTTCATCACATTCTCAAAGGAGTGATGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355469.4
CDS-3UTR TCA 90 bp TTTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCATGTCCCCATGGGGCTTaGGCTTCTGCCTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: FLLFPPPPIHSGKQACTPCPHGA*ASASEG
Trigger: TCCCTCTGAGGCAGAAGCTCAAGCCCCATGGGGACA...TGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCGAAGCCTATTCCTTCTaGAGGACGAGTCTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLEAYSF*RTSLEG
Trigger: TCCTTCAAGACTCGTCCTTCAGAAGGAATAGGCTTC...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp CCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCGTTTTGCCTGTAACTTaGGTTCAGGTTTGTGACACT +
Preference number: 4 (lower is better)
Translates to: PSTKPHSWTTWDLNPQGAVLPVT*VQVCDT
Trigger: AGTGTCACAAACCTGAACTCAAGTTACAGGCAAAAC...GGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTTGGGCCAAAGCCCTTGTGCTCAGTCCTCTTTaGTGCCCACAGAAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: PTEVSEHSCPTLPWAKALVLSPL*CPQKSQ
Trigger: CTGAGACTTCTGTGGGCAGCAAAGAGGACTGAGCAC...AAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTCCATGGAAACTCTGCTaGCAGAATCCCCTGGAAATG +
Preference number: 4 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSPWKLC*QNPLEM
Trigger: CATTTCCAGGGGATTCTGGCAGCAGAGTTTCCATGG...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp AGGGTCCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGAATTGGGGAGTGTATaGATAGGTGATCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RVPAPNPTAGPLGTSIHRELGSV*IGDPAA
Trigger: AGCTGCAGGATCACCTATCCATACACTCCCCAATTC...CCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp GAGGTAGGTCAGAGAATCAGGGCTTTGGTGATGGGCTCACTCATAACTTTTGGGCGCTGCCTCTCACCGTaGAGTGTGGCCAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: EVGQRIRALVMGSLITFGRCLSP*SVASGQ
Trigger: CTGTCCACTGGCCACACTCCACGGTGAGAGGCAGCG...CCCAAAAGTTATGAGTGAGCCCATCACCAAAGCCCTGATTCTCTGACCTACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355469.4
CDS-3UTR CCA 90 bp TTTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGGCTCTGCTTGGCGGTaGGTGAGCTGCCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: FLLFPPPPIHSGKQACTPGSAWR*VSCHPH
Trigger: ATGAGGATGGCAGCTCACCCACCGCCAAGCAGAGCC...TGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp TTTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAACAGGGCCAGGCCAATaGGAGTGGGAACCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: FLLFPPPPIHSGKQACTPTGPGQ*EWEPLG
Trigger: TCCCAAGGGTTCCCACTCCCATTGGCCTGGCCCTGT...TGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp TTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGCAAGGCTGTGGGAGGTaGAGCAGGGATTCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: FFSSLLHPFIVESKPAPQQGCGR*SRDSRE
Trigger: CTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTG...CTGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CTGGGCAAAGGCCCCAAGATGGGAAAGCCTTGGTGGTTGGGGCATAGAATGGGGCCTGCTCCCAGAAGCTaGTTTCCCAGGATGATTTTC +
Preference number: 4 (lower is better)
Translates to: LGKGPKMGKPWWLGHRMGPAPRS*FPRMIF
Trigger: GAAAATCATCCTGGGAAACCAGCTTCTGGGAGCAGG...CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCATCTTGGGGCCTTTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCCAGCACATGTTCCCATaGAAACTCTGCTGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLQHMFP*KLCCQN
Trigger: ATTCTGGCAGCAGAGTTTCCATGGGAACATGTGCTG...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
3UTR CAA 72 bp CACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTaGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATG +
Preference number: 4 (lower is better)
Translates to: HRSLRTFLPHPP*GQSPLGSRPFM
Trigger: CATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp CCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTTGGGCCAAAGCCCTTTTGAGTTCAGGTTTGTaGCACTGGGTGGCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PTEVSEHSCPTLPWAKALLSSGL*HWVAKE
Trigger: CTCTTTGGCCACCCAGTGTCACAAACCTGAACTCAA...AAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp TTTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCACTGAGGCCATCATTCTaGCCACAGGTCAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: FLLFPPPPIHSGKQACTPLRPSF*PQVREG
Trigger: CCCTTCCCTGACCTGTGGTCAGAATGATGGCCTCAG...TGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTGAAATGAGGGTGATGTaGGCACCTGAAACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSEMRVM*APETAE
Trigger: TTCTGCTGTTTCAGGTGCCCACATCACCCTCATTTC...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp GATCATCACTCCTTTGAGAATGTGATGAAAACTGGCTGGGTGTGCTGGCTCATGAGCACAAGGGTGACCTaGCAGTCCAGGGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: DHHSFENVMKTGWVCWLMSTRVT*QSRVWL
Trigger: GAGCCACACCCTGGACTGCCAGGTCACCCTTGTGCT...CATGAGCCAGCACACCCAGCCAGTTTTCATCACATTCTCAAAGGAGTGATGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355469.4
CDS-3UTR CCA 90 bp AGAGGTAGGTCAGAGAATCAGGGCTTTGGTGATGGGCTCACTCATAACTTTTGGAGTAGTAGGTGCCAGTaGCCGATGCTCCCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RGRSENQGFGDGLTHNFWSSRCQ*PMLPAA
Trigger: TGCTGCCGGGAGCATCGGCCACTGGCACCTACTACT...CCAAAAGTTATGAGTGAGCCCATCACCAAAGCCCTGATTCTCTGACCTACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355469.4
CDS-3UTR CCA 90 bp TTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGTGGCATTGCAAGGAATaGAGTGACGCCACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FFSSLLHPFIVESKPAPQWHCKE*SDATQP
Trigger: AGGCTGAGTGGCGTCACTCCATTCCTTGCAATGCCA...CTGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTACAAATGACATCCCCTaGCATTGCAAGGAATGGAGT +
Preference number: 4 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSTNDIP*HCKEWS
Trigger: ACTCCATTCCTTGCAATGCCAGGGGATGTCATTTGT...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTGAATTTTATTCCAAGTaGGGCAAAAACCATGCAAGG +
Preference number: 4 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSEFYSK*GKNHAR
Trigger: CCTTGCATGGTTTTTGCCTCACTTGGAATAAAATTC...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp TTTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGAGGCTGAAACCCATTaGAGGGGTCAACTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: FLLFPPPPIHSGKQACTPEAETH*RGQLPR
Trigger: TCTAGGAAGTTGACCCCTTCAATGGGTTTCAGCCTC...TGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTATAAAAATCCATCCCTaGAATCCCAGAGGCATCTTT +
Preference number: 4 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSIKIHP*NPRGIF
Trigger: AAAGATGCCTCTGGGATTTCAGGGATGGATTTTTAT...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR GCA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCTTTCACTGTAACATATaGTTCTGTCACCCACATATG +
Preference number: 4 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLFHCNI*FCHPHM
Trigger: CATATGTGGGTGACAGAAGCATATGTTACAGTGAAA...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp CGCAGAGGTAGGTCAGAGAATCAGGGCTTTGGTGATGGGCTCACTCATAACTTTAGGGTGGCAGTTTGTTaGCTTCTTAGGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RRGRSENQGFGDGLTHNFRVAVC*LLRAPL
Trigger: CAGAGGAGCCCTAAGAAGCCAACAAACTGCCACCCT...AAAGTTATGAGTGAGCCCATCACCAAAGCCCTGATTCTCTGACCTACCTCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355469.4
CDS-3UTR CCA 90 bp GCTTTGGTGATGGGCTCACTCATAACTTTTGGGATCATCACTCCTTTGAGAATGTGGCAGTCCAGGGTGTaGCTCTGGTTCTCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: ALVMGSLITFGIITPLRMWQSRV*LWFSVP
Trigger: GGGCACAGAGAACCAGAGCCACACCCTGGACTGCCA...CATTCTCAAAGGAGTGATGATCCCAAAAGTTATGAGTGAGCCCATCACCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355469.4
CDS-3UTR CCA 90 bp CACATCCGTCCGTCCTGGAAGGTCCACAGCTCCCCTTCACCTAGGCCTCACCTAGAGGCATCTTTAGAATaGAGCATGGACTTTACATTA +
Preference number: 4 (lower is better)
Translates to: HIRPSWKVHSSPSPRPHLEASLE*SMDFTL
Trigger: TAATGTAAAGTCCATGCTCCATTCTAAAGATGCCTC...TAGGTGAGGCCTAGGTGAAGGGGAGCTGTGGACCTTCCAGGACGGACGGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR TCA 90 bp TTTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGCTGGTTTCCCAGGATaGTTTTCTCAAGCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: FLLFPPPPIHSGKQACTPAGFPG*FSQASA
Trigger: AGCACTTGCTTGAGAAAATCATCCTGGGAAACCAGC...TGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CCA 90 bp AATCAGGGCTTTGGTGATGGGCTCACTCATAACTTTTGGGATCATCACTCCTTTTCTCACCGTGGAGTGTaGCCAGTGGACAGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: NQGFGDGLTHNFWDHHSFSHRGV*PVDRAV
Trigger: TACTGCTCTGTCCACTGGCCACACTCCACGGTGAGA...AAAGGAGTGATGATCCCAAAAGTTATGAGTGAGCCCATCACCAAAGCCCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355469.4
CDS-3UTR CCA 90 bp AGAGGTAGGTCAGAGAATCAGGGCTTTGGTGATGGGCTCACTCATAACTTTTGGGAATTGGGGAGTGTATaGATAGGTGATCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RGRSENQGFGDGLTHNFWELGSV*IGDPAA
Trigger: AGCTGCAGGATCACCTATCCATACACTCCCCAATTC...CCAAAAGTTATGAGTGAGCCCATCACCAAAGCCCTGATTCTCTGACCTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355469.4
CDS-3UTR TCA 90 bp GAGAATCAGGGCTTTGGTGATGGGCTCACTCATAACTTTTGGGATCATCACTCCGGATCATCACTCCTTTaGGAATGTGATGAAAACTGG +
Preference number: 4 (lower is better)
Translates to: ENQGFGDGLTHNFWDHHSGSSLL*ECDENW
Trigger: CCAGTTTTCATCACATTCTCAAAGGAGTGATGATCC...GGAGTGATGATCCCAAAAGTTATGAGTGAGCCCATCACCAAAGCCCTGATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355469.4
CDS-3UTR CCA 90 bp GATCATCACTCCTTTGAGAATGTGATGAAAACTGGCTGGGTGTGCTGGCTCATGCTCACTCATAACTTTTaGGATCATCACTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: DHHSFENVMKTGWVCWLMLTHNF*DHHSFE
Trigger: CTCAAAGGAGTGATGATCCCAAAAGTTATGAGTGAG...CATGAGCCAGCACACCCAGCCAGTTTTCATCACATTCTCAAAGGAGTGATGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355469.4
CDS-3UTR CAA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCTGCAGGGAGGCCGTGTaGGTGATGCCTGGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGCREAV*VMPGPG
Trigger: CCCTGGCCCAGGCATCACCAACACGGCCTCCCTGCA...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS CCA 90 bp GGGAGGCCTGGCAGGGCCCGCCACCTCACAGGCTGGTTCTCCATCTaGGGGCCTGCTTGTCTGCGGCGACTCTTTAGTTCACAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: GRPGRARHLTGWFSI*GPACLRRLFSSQEG
Trigger: CCCCTCCTGTGAACTAAAGAGTCGCCGCAGACAAGCAGGCCCCCAGATGGAGAACCAGCCTGTGAGGTGGCGGGCCCTGCCAGGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp CCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCGAGAGGGGGCTCTGCTaGGCGGTGGGTGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: PSTKPHSWTTWDLNPQGAERGLC*AVGELP
Trigger: TGGCAGCTCACCCACCGCCAAGCAGAGCCCCCTCTC...GGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp CGTACAGGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCGGGGCGCTTTGCTGGTaGGGCCAAGGGAGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: RTGPGQWEWEPLGEGASGGALCW*GQGRKG
Trigger: GCCCTTCCTCCCTTGGCCCAACCAGCAAAGCGCCCC...GCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCCTGTACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp AGGCTGGGCCGGGAGAGATGGTGGGAAATCCCACCAGGTCAGGGGCCAGTGGGCTTGCCCCACCCTCCCTaGGGCCAAAGCCCTTTAGGG +
Preference number: 5 (lower is better)
Translates to: RLGRERWWEIPPGQGPVGLPHPP*GQSPLG
Trigger: CCCTAAAGGGCTTTGGCCCAAGGGAGGGTGGGGCAA...GCCCACTGGCCCCTGACCTGGTGGGATTTCCCACCATCTCTCCCGGCCCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS GCA 90 bp GCGGTCTCTCCTGGGAGAGGGGGCTCTGCTTGGCGGTGGGTGAGCTaGCATCCTCATTCTCGATGCAGGCATAGACCTCGGTCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: AVSPGRGGSAWRWVS*HPHSRCRHRPRSRG
Trigger: GCCGCGAGACCGAGGTCTATGCCTGCATCGAGAATGAGGATGGCAGCTCACCCACCGCCAAGCAGAGCCCCCTCTCCCAGGAGAGACCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp CGTACAGGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCCTCCCTGGGCACATTaGGGGTTGGGGCAGCCCACA +
Preference number: 5 (lower is better)
Translates to: RTGPGQWEWEPLGEGASGPPWAH*GLGQPT
Trigger: TGTGGGCTGCCCCAACCCCAAATGTGCCCAGGGAGG...GCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCCTGTACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS CCA 90 bp GCCGATGCTCCCGGCAGCACAAGGGTGACCTGGCAGTCCAGGGTGTaGCTCTGGTTCTCTGTGCCCAGTCCAGGGTGGCAGTTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: ADAPGSTRVTWQSRV*LWFSVPSPGWQFVG
Trigger: GCCAACAAACTGCCACCCTGGACTGGGCACAGAGAACCAGAGCCACACCCTGGACTGCCAGGTCACCCTTGTGCTGCCGGGAGCATCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329021.10
ENST00000355469.4
CDS-3UTR CAA 90 bp CCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCCTCAGATCAAGTCCTTaGGTGGCAGGGGCTGCCCCG +
Preference number: 5 (lower is better)
Translates to: PSTKPHSWTTWDLNPQGALRSSP*VAGAAP
Trigger: CGGGGCAGCCCCTGCCACCAAAGGACTTGATCTGAG...GGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCCCCCGCATCCGCTTCTaGTTCCAGAGCAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLPRIRF*FQSSRA
Trigger: GGCCCTGCTGCTCTGGAACAAGAAGCGGATGCGGGG...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGAGGGGTCCATCATCCTaGTCTGTCCCCCAGACCTCC +
Preference number: 5 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQRGPSS*SVPQTS
Trigger: GGAGGTCTGGGGGACAGACAAGGATGATGGACCCCT...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp CGTACAGGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCCACAGCTGGACCACTaGGGACCTCAATCCACAGGG +
Preference number: 5 (lower is better)
Translates to: RTGPGQWEWEPLGEGASGPQLDH*GPQSTG
Trigger: CCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGG...GCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCCTGTACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGACCTTCCGGCTGCCATaGAGGGTCCCAGCACCAAAC +
Preference number: 5 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQTFRLP*RVPAPN
Trigger: GTTTGGTGCTGGGACCCTCAATGGCAGCCGGAAGGT...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp CCCAGCACCAAACCCCACAGCTGGACCACTTGGGACCTCAATCCACAGGGGGCCTCGCCCTGTGCCAGCTaGTCTCTGCAGGCTCTCAGT +
Preference number: 5 (lower is better)
Translates to: PSTKPHSWTTWDLNPQGASPCAS*SLQALS
Trigger: ACTGAGAGCCTGCAGAGACAAGCTGGCACAGGGCGA...GGCCCCCTGTGGATTGAGGTCCCAAGTGGTCCAGCTGTGGGGTTTGGTGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS CCA 90 bp CAGGACACTCAGGAGGCCGGTGAAGCCAAAGAGCAGGAGCTTCTGTaGACTCTGCGGGGGCTCTCGGTACCCTGCGTCTCTGACCAGGAT +
Preference number: 5 (lower is better)
Translates to: QDTQEAGEAKEQELL*TLRGLSVPCVSDQD
Trigger: ATCCTGGTCAGAGACGCAGGGTACCGAGAGCCCCCGCAGAGTCCACAGAAGCTCCTGCTCTTTGGCTTCACCGGCCTCCTGAGTGTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS CCA 90 bp GCTGCTTGGGGCTGCTGGCAGATCTTGGATCTGGGCACTTCCTGGTaGGGTCCTTCCCTGGACCCCGCATCCGCTTCTTGTTCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: AAWGCWQILDLGTSW*GPSLDPASASCSRA
Trigger: TGCTCTGGAACAAGAAGCGGATGCGGGGTCCAGGGAAGGACCCCACCAGGAAGTGCCCAGATCCAAGATCTGCCAGCAGCCCCAAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp GGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCATTCAGGCCCTCTCCTGGTCTaGCTGGCTTCGGTTTTCCCA +
Preference number: 5 (lower is better)
Translates to: GPGQWEWEPLGEGASGHSGPLLV*LASVFP
Trigger: TGGGAAAACCGAAGCCAGCAAGACCAGGAGAGGGCC...TGAATGGCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGTCCCTGCCTCTCTCCTaGCTCACTGAAGACCTCAGC +
Preference number: 5 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQSLPLS*LTEDLS
Trigger: GCTGAGGTCTTCAGTGAGCAAGGAGAGAGGCAGGGA...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp CCACCCTCCCTTGGGCCAAAGCCCTTTAGGGTCCCGTCCTTTCATGCTGTGCTCGGCTGCTGGCAGATCTaGGATCTGGGCACTTCCTGG +
Preference number: 5 (lower is better)
Translates to: PPSLGPKPFRVPSFHAVLGCWQI*DLGTSW
Trigger: CCAGGAAGTGCCCAGATCCAAGATCTGCCAGCAGCC...GAGCACAGCATGAAAGGACGGGACCCTAAAGGGCTTTGGCCCAAGGGAGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp ACAAGGCTGTGGGAGGTGGAGCAGGGATTCAAGGGAGGCCCTGAGGCCACCCAGTCTGAAGGATGCTGCTaGGGGCTGCTGGCAGATCTT +
Preference number: 5 (lower is better)
Translates to: TRLWEVEQGFKGGPEATQSEGCC*GLLADL
Trigger: AAGATCTGCCAGCAGCCCCAAGCAGCATCCTTCAGA...CTGGGTGGCCTCAGGGCCTCCCTTGAATCCCTGCTCCACCTCCCACAGCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp CTGGGCAAAGGCCCCAAGATGGGAAAGCCTTGGTGGTTGGGGCATAGAATGGGGAGACTGAGGGGCGCTTaGCTGGTTGGGCCAAGGGAG +
Preference number: 5 (lower is better)
Translates to: LGKGPKMGKPWWLGHRMGRLRGA*LVGPRE
Trigger: CTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCT...CCCCATTCTATGCCCCAACCACCAAGGCTTTCCCATCTTGGGGCCTTTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS CCA 90 bp CGCGGCGCTGCAGAGCTGTGTAGACAGATTCTGAAGGATGCTGCTTaGGGCTGCTGGCAGATCTTGGATCTGGGCACTTCCTGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: RGAAELCRQILKDAA*GCWQILDLGTSWWG
Trigger: ACCCCACCAGGAAGTGCCCAGATCCAAGATCTGCCAGCAGCCCCAAGCAGCATCCTTCAGAATCTGTCTACACAGCTCTGCAGCGCCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp CCAGGAAAGCCCTTGAAGACTGAGGGGCGCTTTGCTGGTTGGGCCAAGGGAGGACAGACAGAAGGGACTTaGGGGGACTCCACCTTGGGT +
Preference number: 5 (lower is better)
Translates to: PGKPLKTEGRFAGWAKGGQTEGT*GDSTLG
Trigger: ACCCAAGGTGGAGTCCCCCAAAGTCCCTTCTGTCTG...TCCTCCCTTGGCCCAACCAGCAAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp CACATCCGTCCGTCCTGGAAGGTCCACAGCTCCCCTTCACCTAGGCCTCACCTAAAGGAGATAGCTGTGTaGGCCAGGGAGGCCATGATG +
Preference number: 5 (lower is better)
Translates to: HIRPSWKVHSSPSPRPHLKEIAV*AREAMM
Trigger: CATCATGGCCTCCCTGGCCAACACAGCTATCTCCTT...TAGGTGAGGCCTAGGTGAAGGGGAGCTGTGGACCTTCCAGGACGGACGGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTTCCTTCCTCTCCAGCTaGTACCCAAGCCCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSSFLSS*YPSPLC
Trigger: GCAGAGAGGGCTTGGGTACAAGCTGGAGAGGAAGGA...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS GCA 90 bp GCTGCAGAGCTGTGTAGACAGATTCTGAAGGATGCTGCTTGGGGCTaGTGGCAGATCTTGGATCTGGGCACTTCCTGGTGGGGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: AAELCRQILKDAAWG*WQILDLGTSWWGPS
Trigger: GGAAGGACCCCACCAGGAAGTGCCCAGATCCAAGATCTGCCAGCAGCCCCAAGCAGCATCCTTCAGAATCTGTCTACACAGCTCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTCATCCAGGAAAGCCCTaGAAGACTGAGGGGCGCTTT +
Preference number: 5 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSHPGKP*KTEGRF
Trigger: AAAGCGCCCCTCAGTCTTCAAGGGCTTTCCTGGATG...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTGGTGCTCAGTCCTCTTaGCTGCCCACAGAAGTCTCA +
Preference number: 5 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSGAQSS*LPTEVS
Trigger: TGAGACTTCTGTGGGCAGCAAAGAGGACTGAGCACC...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp GGGCCAGGCCAATGGGAGTGGGAACCCTTGGGAGAGGGAGCTTCAGGCCATTCATCAGTTCCTGCAATATaGGCTGTGAAGGGAACCCCA +
Preference number: 5 (lower is better)
Translates to: GPGQWEWEPLGEGASGHSSVPAI*AVKGTP
Trigger: TGGGGTTCCCTTCACAGCCAATATTGCAGGAACTGA...TGAATGGCCTGAAGCTCCCTCTCCCAAGGGTTCCCACTCCCATTGGCCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp TTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGTTGGGGGACTCCACCTaGGGTAGAAGGAGGGACAGC +
Preference number: 5 (lower is better)
Translates to: FFSSLLHPFIVESKPAPQLGDST*GRRRDS
Trigger: GCTGTCCCTCCTTCTACCCAAGGTGGAGTCCCCCAA...CTGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp TTTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCACTGTCCCCATGGGGCTaGAGCTTCTGCCTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: FLLFPPPPIHSGKQACTPLSPWG*SFCLRG
Trigger: CCCTCTGAGGCAGAAGCTCAAGCCCCATGGGGACAG...TGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp GAGGGTGACCAAGGAGATGACAGAGTGCACGTACAGGGCCAGGCCAATGGGAGTTCTGAAGGACGAGTCTaGAAGGAAATGCACACCCAC +
Preference number: 5 (lower is better)
Translates to: EGDQGDDRVHVQGQANGSSEGRV*KEMHTH
Trigger: GTGGGTGTGCATTTCCTTCAAGACTCGTCCTTCAGA...ACTCCCATTGGCCTGGCCCTGTACGTGCACTCTGTCATCTCCTTGGTCACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp TTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGATCCCCTGGAAATGTTaGCTGAGGAGGGGCCACCGT +
Preference number: 5 (lower is better)
Translates to: FFSSLLHPFIVESKPAPQIPWKC*LRRGHR
Trigger: ACGGTGGCCCCTCCTCAGCAAACATTTCCAGGGGAT...CTGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp TTCTTCTCTTCCCTCCTCCACCCATTCATAGTGGAAAGCAAGCCTGCACCCCAGTGGGTAGGTAGGGATTaGCATAGCTGCTCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: FFSSLLHPFIVESKPAPQWVGRD*HSCSPA
Trigger: AGCTGGGGAGCAGCTATGCAAATCCCTACCTACCCA...CTGGGGTGCAGGCTTGCTTTCCACTATGAATGGGTGGAGGAGGGAAGAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp GAGGTAGGTCAGAGAATCAGGGCTTTGGTGATGGGCTCACTCATAACTTTTGGGGTAATCCCAACACTCTaGGAGGCTGAGGTGGGCGGA +
Preference number: 5 (lower is better)
Translates to: EVGQRIRALVMGSLITFGVIPTL*EAEVGG
Trigger: TCCGCCCACCTCAGCCTCCAAGAGTGTTGGGATTAC...CCCAAAAGTTATGAGTGAGCCCATCACCAAAGCCCTGATTCTCTGACCTACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355469.4
CDS-3UTR CAA 90 bp GAGAATCAGGGCTTTGGTGATGGGCTCACTCATAACTTTTGGGATCATCACTCCAAGGAGATAGCTGTGTaGGCCAGGGAGGCCATGATG +
Preference number: 5 (lower is better)
Translates to: ENQGFGDGLTHNFWDHHSKEIAV*AREAMM
Trigger: CATCATGGCCTCCCTGGCCAACACAGCTATCTCCTT...GGAGTGATGATCCCAAAAGTTATGAGTGAGCCCATCACCAAAGCCCTGATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355469.4
CDS-3UTR CAA 90 bp CCCACAGAAGTCTCAGAACATTCTTGCCCCACCCTCCCTTGGGCCAAAGCCCTTTGTTTGTTTGTTTATTaGGACAGAGCGTGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: PTEVSEHSCPTLPWAKALCLFVY*DRACSV
Trigger: TACAGAGCACGCTCTGTCCAAATAAACAAACAAACA...AAGGGCTTTGGCCCAAGGGAGGGTGGGGCAAGAATGTTCTGAGACTTCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS-3UTR CAA 90 bp AATCAGGGCTTTGGTGATGGGCTCACTCATAACTTTTGGGATCATCACTCCTTTAGGTGGGCGGATCACTaGAGGTCAGGATTCGAGACC +
Preference number: 5 (lower is better)
Translates to: NQGFGDGLTHNFWDHHSFRWADH*RSGFET
Trigger: GGTCTCGAATCCTGACCTCAAGTGATCCGCCCACCT...AAAGGAGTGATGATCCCAAAAGTTATGAGTGAGCCCATCACCAAAGCCCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355469.4
CDS-3UTR CAA 90 bp AATCAGGGCTTTGGTGATGGGCTCACTCATAACTTTTGGGATCATCACTCCTTTCAGAGAATCAGGGCTTaGGTGATGGGCTCACTCATA +
Preference number: 5 (lower is better)
Translates to: NQGFGDGLTHNFWDHHSFQRIRA*VMGSLI
Trigger: TATGAGTGAGCCCATCACCAAAGCCCTGATTCTCTG...AAAGGAGTGATGATCCCAAAAGTTATGAGTGAGCCCATCACCAAAGCCCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355469.4
CDS CCA 72 bp CGTGGGAGGCCTGGCAGGGCCCGCCACCTCACAGGCTaGTTCTCCATCTGGGGGCCTGCTTGTCTGCGGCGA +
Preference number: 6 (lower is better)
Translates to: RGRPGRARHLTG*FSIWGPACLRR
Trigger: TCGCCGCAGACAAGCAGGCCCCCAGATGGAGAACCAGCCTGTGAGGTGGCGGGCCCTGCCAGGCCTCCCACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS CCA 72 bp GTGTTGGCCAGGGAGGCCATGATGGGCAGGCCGGTGTaGGTCACTGACTGTCCTCCTGCCAGTCGCAGGGTC +
Preference number: 6 (lower is better)
Translates to: VLAREAMMGRPV*VTDCPPASRRV
Trigger: GACCCTGCGACTGGCAGGAGGACAGTCAGTGACCCACACCGGCCTGCCCATCATGGCCTCCCTGGCCAACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329021.10
ENST00000355469.4
CDS GCA 72 bp GCTTGGCGGTGGGTGAGCTGCCATCCTCATTCTCGATaGAGGCATAGACCTCGGTCTCGCGGCGCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: AWRWVSCHPHSR*RHRPRSRGAAE
Trigger: CTCTGCAGCGCCGCGAGACCGAGGTCTATGCCTGCATCGAGAATGAGGATGGCAGCTCACCCACCGCCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS CCA 72 bp GGCAGGGCCCGCCACCTCACAGGCTGGTTCTCCATCTaGGGGCCTGCTTGTCTGCGGCGACTCTTTAGTTCA +
Preference number: 6 (lower is better)
Translates to: GRARHLTGWFSI*GPACLRRLFSS
Trigger: TGAACTAAAGAGTCGCCGCAGACAAGCAGGCCCCCAGATGGAGAACCAGCCTGTGAGGTGGCGGGCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS CCA 72 bp CAGGAGGCCGGTGAAGCCAAAGAGCAGGAGCTTCTGTaGACTCTGCGGGGGCTCTCGGTACCCTGCGTCTCT +
Preference number: 6 (lower is better)
Translates to: QEAGEAKEQELL*TLRGLSVPCVS
Trigger: AGAGACGCAGGGTACCGAGAGCCCCCGCAGAGTCCACAGAAGCTCCTGCTCTTTGGCTTCACCGGCCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS TCA 72 bp CCGTGCCCACTACACTCAGGACACTCAGGAGGCCGGTaGAGCCAAAGAGCAGGAGCTTCTGTGGACTCTGCG +
Preference number: 6 (lower is better)
Translates to: PCPLHSGHSGGR*SQRAGASVDSA
Trigger: CGCAGAGTCCACAGAAGCTCCTGCTCTTTGGCTTCACCGGCCTCCTGAGTGTCCTGAGTGTAGTGGGCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS TCA 72 bp GGTCTCGCGGCGCTGCAGAGCTGTGTAGACAGATTCTaGAGGATGCTGCTTGGGGCTGCTGGCAGATCTTGG +
Preference number: 6 (lower is better)
Translates to: GLAALQSCVDRF*RMLLGAAGRSW
Trigger: CCAAGATCTGCCAGCAGCCCCAAGCAGCATCCTTCAGAATCTGTCTACACAGCTCTGCAGCGCCGCGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS TCA 72 bp GGGCTGCCCCGGTCCTCTGACCCAGGGCAAGCTCTATaGGCGGTGGAGCCCATCCTAGAGATTTTCATAGAC +
Preference number: 6 (lower is better)
Translates to: GLPRSSDPGQAL*AVEPILEIFID
Trigger: GTCTATGAAAATCTCTAGGATGGGCTCCACCGCTCATAGAGCTTGCCCTGGGTCAGAGGACCGGGGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS CCA 72 bp CTGGTTCTCTGTGCCCAGTCCAGGGTGGCAGTTTGTTaGCTTCTTAGGGCTCCTCTGTCCCTGGAGATCTTC +
Preference number: 6 (lower is better)
Translates to: LVLCAQSRVAVC*LLRAPLSLEIF
Trigger: GAAGATCTCCAGGGACAGAGGAGCCCTAAGAAGCCAACAAACTGCCACCCTGGACTGGGCACAGAGAACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329021.10
ENST00000355469.4
CDS GCA 72 bp CTGTGTAGACAGATTCTGAAGGATGCTGCTTGGGGCTaGTGGCAGATCTTGGATCTGGGCACTTCCTGGTGG +
Preference number: 6 (lower is better)
Translates to: LCRQILKDAAWG*WQILDLGTSWW
Trigger: CCACCAGGAAGTGCCCAGATCCAAGATCTGCCAGCAGCCCCAAGCAGCATCCTTCAGAATCTGTCTACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329021.10
CDS CCA 72 bp GTAGCTGACTGTGAAAACCTTGAATTGGGGAGTGTATaGATAGGTGATCCTGCAGCTGAAGGAGATAGCTGT +
Preference number: 6 (lower is better)
Translates to: VADCENLELGSV*IGDPAAEGDSC
Trigger: ACAGCTATCTCCTTCAGCTGCAGGATCACCTATCCATACACTCCCCAATTCAAGGTTTTCACAGTCAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329021.10
ENST00000355469.4