RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000196712

Ensembl transcript IDs: ENST00000356175.7, ENST00000358273.9, ENST00000422121.2, ENST00000431387.8, ENST00000456735.6, ENST00000468273.1, ENST00000471572.6, ENST00000479536.2, ENST00000487476.5, ENST00000489712.6, ENST00000490416.2, ENST00000493220.5, ENST00000495910.6, ENST00000498569.5, ENST00000577967.1, ENST00000579081.5, ENST00000581113.6, ENST00000581790.5, ENST00000582892.1

Found 1580 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGGTTGCCCCATGTCCAGGCTCATGGATTTCCTGGCTCGGGGACTaGTCTGGCCGACAGTTGGATAGGTGGCTGCAAGGTATCCTTCAG +
Preference number: 1 (lower is better)
Translates to: KVAPCPGSWISWLGD*SGRQLDRWLQGILQ
Trigger: CTGAAGGATACCTTGCAGCCACCTATCCAACTGTCGGCCAGACCAGTCCCCGAGCCAGGAAATCCATGAGCCTGGACATGGGGCAACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR GCA 90 bp GTCTCTCCATTTGCTGGAGTCTCCTTTAAGCCCAGCTTCCTCACATaGCTGCGTGCTGAGCAGTGCTCCCAGGCTGTAGTGCAGAAGTGC +
Preference number: 1 (lower is better)
Translates to: VSPFAGVSFKPSFLT*LRAEQCSQAVVQKC
Trigger: GCACTTCTGCACTACAGCCTGGGAGCACTGCTCAGCACGCAGGCATGTGAGGAAGCTGGGCTTAAAGGAGACTCCAGCAAATGGAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
3UTR CCA 90 bp TTGAGCAGTGTCCCAGGGACATCTTTTGGCCGAATCTTGGTGTGTTaGGGGATAGAGTCGGGCTGTGACAGTTCCCAGCGGGTCCGGATA +
Preference number: 1 (lower is better)
Translates to: LSSVPGTSFGRILVC*GIESGCDSSQRVRI
Trigger: TATCCGGACCCGCTGGGAACTGTCACAGCCCGACTCTATCCCCCAACACACCAAGATTCGGCCAAAAGATGTCCCTGGGACACTGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CCA 90 bp AAACTGCCAGCGCTTCTTTGCTTCTGCACTTGGCTTGCGGATCCGTaGCGAGTTCGTCCACTGTTACAGTGGCCAGTGGTAGGGGAGAGT +
Preference number: 1 (lower is better)
Translates to: KLPALLCFCTWLADP*RVRPLLQWPVVGES
Trigger: ACTCTCCCCTACCACTGGCCACTGTAACAGTGGACGAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CCA 90 bp CCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTaGGAGAGCCAAGACCATGGTGGCAGCTTGGCATCCTTGGCACTG +
Preference number: 1 (lower is better)
Translates to: PGPRNCETYPRNTGL*ESQDHGGSLASLAL
Trigger: CAGTGCCAAGGATGCCAAGCTGCCACCATGGTCTTGGCTCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR TCA 90 bp TGGGGGATAGAGTCGGGCTGTGACAGTTCCCAGCGGGTCCGGATATaGATGATAGACTGGACAATGGCTTCACACTCCTGGTGCATGAAG +
Preference number: 1 (lower is better)
Translates to: WGIESGCDSSQRVRI*MIDWTMASHSWCMK
Trigger: CTTCATGCACCAGGAGTGTGAAGCCATTGTCCAGTCTATCATTCATATCCGGACCCGCTGGGAACTGTCACAGCCCGACTCTATCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR GCA 90 bp AATGGAAGACAGAGCTGTAGCCACTTTGCCCCAAATCTACTGAACTaGATCTCCATCTGGGCAACTAAGGGCATGCCCCTCGGATGGGAG +
Preference number: 1 (lower is better)
Translates to: NGRQSCSHFAPNLLN*ISIWATKGMPLGWE
Trigger: CTCCCATCCGAGGGGCATGCCCTTAGTTGCCCAGATGGAGATGCAGTTCAGTAGATTTGGGGCAAAGTGGCTACAGCTCTGTCTTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR GCA 90 bp ATTACGTTTGAAACTGCCAGCGCTTCTTTGCTTCTGCACTTGGCTTaGGGATCCGTGGCGAGTTCGTCCACTGTTACAGTGGCCAGTGGT +
Preference number: 1 (lower is better)
Translates to: ITFETASASLLLHLA*GSVASSSTVTVASG
Trigger: ACCACTGGCCACTGTAACAGTGGACGAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CCA 90 bp AGCTGTAGCCACTTTGCCCCAAATCTACTGAACTGCATCTCCATCTaGGCAACTAAGGGCATGCCCCTCGGATGGGAGTACTGGCATAAC +
Preference number: 1 (lower is better)
Translates to: SCSHFAPNLLNCISI*ATKGMPLGWEYWHN
Trigger: GTTATGCCAGTACTCCCATCCGAGGGGCATGCCCTTAGTTGCCCAGATGGAGATGCAGTTCAGTAGATTTGGGGCAAAGTGGCTACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR CCA 90 bp ACAATGGCTTCACACTCCTGGTGCATGAAGGTGAGCGGCGTGCCCTaGTTTGCAATGGTTAAGGTGAACTGGTTCTCATCTACTAGGCAG +
Preference number: 1 (lower is better)
Translates to: TMASHSWCMKVSGVP*FAMVKVNWFSSTRQ
Trigger: CTGCCTAGTAGATGAGAACCAGTTCACCTTAACCATTGCAAACCAGGGCACGCCGCTCACCTTCATGCACCAGGAGTGTGAAGCCATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CCA 90 bp GGCCGACAGTTGGATAGGTGGCTGCAAGGTATCCTTCAGAACCTTTaGGAGAGGACCATGGCTGAGTCTCCTTTAGTGTCCTATAGGAAG +
Preference number: 1 (lower is better)
Translates to: GRQLDRWLQGILQNL*ERTMAESPLVSYRK
Trigger: CTTCCTATAGGACACTAAAGGAGACTCAGCCATGGTCCTCTCCCAAAGGTTCTGAAGGATACCTTGCAGCCACCTATCCAACTGTCGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CCA 90 bp ATGCTATTACGTTTGAAACTGCCAGCGCTTCTTTGCTTCTGCACTTaGCTTGCGGATCCGTGGCGAGTTCGTCCACTGTTACAGTGGCCA +
Preference number: 1 (lower is better)
Translates to: MLLRLKLPALLCFCT*LADPWRVRPLLQWP
Trigger: TGGCCACTGTAACAGTGGACGAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACGTAATAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR TCA 90 bp ATCTTTTGGCCGAATCTTGGTGTGTTGGGGGATAGAGTCGGGCTGTaGCAGTTCCCAGCGGGTCCGGATATGAATGATAGACTGGACAAT +
Preference number: 1 (lower is better)
Translates to: IFWPNLGVLGDRVGL*QFPAGPDMNDRLDN
Trigger: ATTGTCCAGTCTATCATTCATATCCGGACCCGCTGGGAACTGTCACAGCCCGACTCTATCCCCCAACACACCAAGATTCGGCCAAAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CCA 90 bp GGACACAGGATAGAAGCTGACTGTTTAGGATGTGTCCTGGGCACCTaGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTG +
Preference number: 1 (lower is better)
Translates to: GHRIEADCLGCVLGT*LSHEQVLSEWKTEL
Trigger: CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAGGACACATCCTAAACAGTCAGCTTCTATCCTGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR GCA 90 bp ACGATCTTCTTAATGCTATTACGTTTGAAACTGCCAGCGCTTCTTTaGTTCTGCACTTGGCTTGCGGATCCGTGGCGAGTTCGTCCACTG +
Preference number: 1 (lower is better)
Translates to: TIFLMLLRLKLPALL*FCTWLADPWRVRPL
Trigger: CAGTGGACGAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACGTAATAGCATTAAGAAGATCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CCA 90 bp CCAGAAACACTGGGTTGTGGGAGAGCCAAGACCATGGTGGCAGCTTaGCATCCTTGGCACTGGGTTACTGATCTATTTCTAAACACAGTT +
Preference number: 1 (lower is better)
Translates to: PETLGCGRAKTMVAA*HPWHWVTDLFLNTV
Trigger: AACTGTGTTTAGAAATAGATCAGTAACCCAGTGCCAAGGATGCCAAGCTGCCACCATGGTCTTGGCTCTCCCACAACCCAGTGTTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR GCA 90 bp TTCTTAATGCTATTACGTTTGAAACTGCCAGCGCTTCTTTGCTTCTaGACTTGGCTTGCGGATCCGTGGCGAGTTCGTCCACTGTTACAG +
Preference number: 1 (lower is better)
Translates to: FLMLLRLKLPALLCF*TWLADPWRVRPLLQ
Trigger: CTGTAACAGTGGACGAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACGTAATAGCATTAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CCA 90 bp GAAGATCTGGCATTCAACGATATTCAGCTTTCCAACCCAGGACTGTaGTCTGTCTCTCCATTTGCTGGAGTCTCCTTTAAGCCCAGCTTC +
Preference number: 1 (lower is better)
Translates to: EDLAFNDIQLSNPGL*SVSPFAGVSFKPSF
Trigger: GAAGCTGGGCTTAAAGGAGACTCCAGCAAATGGAGAGACAGACCACAGTCCTGGGTTGGAAAGCTGAATATCGTTGAATGCCAGATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
3UTR CCA 90 bp CTGGGTTGTGGGAGAGCCAAGACCATGGTGGCAGCTTGGCATCCTTaGCACTGGGTTACTGATCTATTTCTAAACACAGTTCTAATTTCA +
Preference number: 1 (lower is better)
Translates to: LGCGRAKTMVAAWHP*HWVTDLFLNTVLIS
Trigger: TGAAATTAGAACTGTGTTTAGAAATAGATCAGTAACCCAGTGCCAAGGATGCCAAGCTGCCACCATGGTCTTGGCTCTCCCACAACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR GCA 90 bp AAAGCCAAGGTGGCAGCAGGTAGTTTCTGTTGTTCATGCTCTATGTaGTCAGCCAGTTTCCCAGGACAGTCTATGAAAACAAGCCTTTTG +
Preference number: 1 (lower is better)
Translates to: KAKVAAGSFCCSCSM*SASFPGQSMKTSLL
Trigger: CAAAAGGCTTGTTTTCATAGACTGTCCTGGGAAACTGGCTGAGCACATAGAGCATGAACAACAGAAACTACCTGCTGCCACCTTGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR GCA 90 bp TCCTCTTCTAAAGCCAAGGTGGCAGCAGGTAGTTTCTGTTGTTCATaGTCTATGTGCTCAGCCAGTTTCCCAGGACAGTCTATGAAAACA +
Preference number: 1 (lower is better)
Translates to: SSSKAKVAAGSFCCS*SMCSASFPGQSMKT
Trigger: TGTTTTCATAGACTGTCCTGGGAAACTGGCTGAGCACATAGAGCATGAACAACAGAAACTACCTGCTGCCACCTTGGCTTTAGAAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR GCA 90 bp ACTCGGTGCCATTCGTATTGCTGGGTGTGCTCCACAACCTTGCACTaGTTTATGAAGTGTTTCACCAAACATATTTCGAAGTTCAACCGA +
Preference number: 1 (lower is better)
Translates to: TRCHSYCWVCSTTLH*FMKCFTKHISKFNR
Trigger: TCGGTTGAACTTCGAAATATGTTTGGTGAAACACTTCATAAAGCAGTGCAAGGTTGTGGAGCACACCCAGCAATACGAATGGCACCGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR CCA 90 bp TGTGGGAGAGCCAAGACCATGGTGGCAGCTTGGCATCCTTGGCACTaGGTTACTGATCTATTTCTAAACACAGTTCTAATTTCAGCTTTT +
Preference number: 1 (lower is better)
Translates to: CGRAKTMVAAWHPWH*VTDLFLNTVLISAF
Trigger: AAAAGCTGAAATTAGAACTGTGTTTAGAAATAGATCAGTAACCCAGTGCCAAGGATGCCAAGCTGCCACCATGGTCTTGGCTCTCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR GCA 90 bp AAAATGATCCATTTGCTTGCAGTGCCACTCCAGAGGATTCCGGATTaGCATAAATACTTCCTCTGGACTCTTGTCATTGAATATACGGAG +
Preference number: 1 (lower is better)
Translates to: KMIHLLAVPLQRIPD*HKYFLWTLVIEYTE
Trigger: CTCCGTATATTCAATGACAAGAGTCCAGAGGAAGTATTTATGGCAATCCGGAATCCTCTGGAGTGGCACTGCAAGCAAATGGATCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR TCA 90 bp TCAAGTGCCTTGCTAAGAATACGGATTATCTGCTTTATCTGCCCATaGGACACTCGTTTGCTAATACACCCAAAGACAACAAGAGCTCTT +
Preference number: 1 (lower is better)
Translates to: SSALLRIRIICFICP*DTRLLIHPKTTRAL
Trigger: AAGAGCTCTTGTTGTCTTTGGGTGTATTAGCAAACGAGTGTCTCATGGGCAGATAAAGCAGATAATCCGTATTCTTAGCAAGGCACTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR GCA 90 bp GATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACACTCTaGACAATTCCATGGATTGGATTTAACAAATTTGGATCTTGGCAC +
Preference number: 1 (lower is better)
Translates to: DVWYCGGDSSWYTTL*TIPWIGFNKFGSWH
Trigger: GTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR CCA 90 bp AAAGGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTaGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTG +
Preference number: 1 (lower is better)
Translates to: KGSIKFRQGFEELII*QHGKPDGFIIKQEV
Trigger: CACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
3UTR CCA 90 bp TGTGGTGGGGATTCTTCATGGTACACCACACTCTGCACAATTCCATaGATTGGATTTAACAAATTTGGATCTTGGCACAATGATAACAGG +
Preference number: 1 (lower is better)
Translates to: CGGDSSWYTTLCTIP*IGFNKFGSWHNDNR
Trigger: CCTGTTATCATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCATGAAGAATCCCCACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR CCA 90 bp GCCATTAAAACCAAAACTTTGCAGGTAAGATGTTTGGTATTGTGGTaGGGATTCTTCATGGTACACCACACTCTGCACAATTCCATGGAT +
Preference number: 1 (lower is better)
Translates to: AIKTKTLQVRCLVLW*GFFMVHHTLHNSMD
Trigger: ATCCATGGAATTGTGCAGAGTGTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTACCTGCAAAGTTTTGGTTTTAATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR GCA 90 bp TCCTCTGGACTCTTGTCATTGAATATACGGAGACTATCTAAAGTATaGAGGTTTTGTTCAAGAAGTGCGGTACCTGCTGAATACAAGTTG +
Preference number: 1 (lower is better)
Translates to: SSGLLSLNIRRLSKV*RFCSRSAVPAEYKL
Trigger: CAACTTGTATTCAGCAGGTACCGCACTTCTTGAACAAAACCTGCATACTTTAGATAGTCTCCGTATATTCAATGACAAGAGTCCAGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CCA 90 bp GTGGTATATTTTACCAGTGTAGCTAGAACAGTAAGAAGCAGCGCCTaGATCTTCGGATCAGTAAGTACTTCTTCATCCAAGAGAACATTT +
Preference number: 1 (lower is better)
Translates to: VVYFTSVARTVRSSA*IFGSVSTSSSKRTF
Trigger: AAATGTTCTCTTGGATGAAGAAGTACTTACTGATCCGAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACTGGTAAAATATACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR CCA 90 bp AGGGTGTTGTTGGCAGGGATACATAAACCTGATGTCTCTAGTAACTaGCCCTCGATTTTTAAATTAAAGGTACAAGTTAAGGCACACAGA +
Preference number: 1 (lower is better)
Translates to: RVLLAGIHKPDVSSN*PSIFKLKVQVKAHR
Trigger: TCTGTGTGCCTTAACTTGTACCTTTAATTTAAAAATCGAGGGCCAGTTACTAGAGACATCAGGTTTATGTATCCCTGCCAACAACACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR GCA 90 bp AGAATTACCAGTTGTCATGGTGCCAATTTCACTATAGATGGTATATaGGAGAGCCTTACCTTCCTGGCAAAATTCTTTGAAAACTGTTCT +
Preference number: 1 (lower is better)
Translates to: RITSCHGANFTIDGI*ESLTFLAKFFENCS
Trigger: AGAACAGTTTTCAAAGAATTTTGCCAGGAAGGTAAGGCTCTCGCATATACCATCTATAGTGAAATTGGCACCATGACAACTGGTAATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490416.2
3UTR TCA 90 bp CTTACTAGTCAAAGGTATTTTTGCATTTCAAAGGCGGCTGAATTTTaGTTTGTGCCAATGCTGATCATTTCAGGCGGTATGAAATACTAC +
Preference number: 1 (lower is better)
Translates to: LTSQRYFCISKAAEF*FVPMLIISGGMKYY
Trigger: GTAGTATTTCATACCGCCTGAAATGATCAGCATTGGCACAAATCAAAATTCAGCCGCCTTTGAAATGCAAAAATACCTTTGACTAGTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR CCA 90 bp CTTTCCCACCATATACTTCTAACAATTAAGAAACACTGTCATCTCTaGGAAAAGAAACCACTCACATTACCTTCAAACAAGAAGCAAGAA +
Preference number: 1 (lower is better)
Translates to: LSHHILLTIKKHCHL*EKKPLTLPSNKKQE
Trigger: TTCTTGCTTCTTGTTTGAAGGTAATGTGAGTGGTTTCTTTTCCCAGAGATGACAGTGTTTCTTAATTGTTAGAAGTATATGGTGGGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR CCA 90 bp ACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGATCTTaGCACAATGATAACAGGGTGTTGATCTTAGAGTCCAACAAATTA +
Preference number: 1 (lower is better)
Translates to: TLCTIPWIGFNKFGS*HNDNRVLILESNKL
Trigger: TAATTTGTTGGACTCTAAGATCAACACCCTGTTATCATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR GCA 90 bp ATAAAATTAGACCAAGGATATCCAATGCAACAAATGCCCACAAATTaGCTTTGGGATAAATCAAACCAAAGGAACACAGAGAATGTTTCA +
Preference number: 1 (lower is better)
Translates to: IKLDQGYPMQQMPTN*LWDKSNQRNTENVS
Trigger: TGAAACATTCTCTGTGTTCCTTTGGTTTGATTTATCCCAAAGGCAATTTGTGGGCATTTGTTGCATTGGATATCCTTGGTCTAATTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR CCA 90 bp ACATGCCTGCGTGCTGAGCAGTGCTCCCAGGCTGTAGTGCAGAAGTGCAATCTCCAGCCTCCTGGTAGCTaGGACTATAGGCATAAGCCA +
Preference number: 2 (lower is better)
Translates to: TCLRAEQCSQAVVQKCNLQPPGS*DYRHKP
Trigger: TGGCTTATGCCTATAGTCCCAGCTACCAGGAGGCTG...GAGATTGCACTTCTGCACTACAGCCTGGGAGCACTGCTCAGCACGCAGGCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
3UTR-3UTR CCA 90 bp GTGGCGAGTTCGTCCACTGTTACAGTGGCCAGTGGTAGGGGAGAGTTCAACGTTGTGAGCGGCGTGCCCTaGTTTGCAATGGTTAAGGTG +
Preference number: 2 (lower is better)
Translates to: VASSSTVTVASGRGEFNVVSGVP*FAMVKV
Trigger: CACCTTAACCATTGCAAACCAGGGCACGCCGCTCAC...AACGTTGAACTCTCCCCTACCACTGGCCACTGTAACAGTGGACGAACTCGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR TCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGTCTGGCATGTGTGACTaGGGGACCAGTTGGACGAGC +
Preference number: 2 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQSGMCD*GTSWTS
Trigger: GCTCGTCCAACTGGTCCCTCAGTCACACATGCCAGA...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR GCA 90 bp CTTTCCAACCCAGGACTGTGGTCTGTCTCTCCATTTGCTGGAGTCTCCTTTAAGGCTTCCTCACATGCCTaGGTGCTGAGCAGTGCTCCC +
Preference number: 2 (lower is better)
Translates to: LSNPGLWSVSPFAGVSFKASSHA*VLSSAP
Trigger: GGGAGCACTGCTCAGCACGCAGGCATGTGAGGAAGC...CTTAAAGGAGACTCCAGCAAATGGAGAGACAGACCACAGTCCTGGGTTGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
3UTR-3UTR GCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGGCAAGGACCGTACAGTaGCTCAGTGATGCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQARTVQ*LSDASL
Trigger: GAGGCTGGCATCACTGAGGCACTGTACGGTCCTTGC...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR CAA 90 bp ATTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTaGTGGGAGAGCCAAGACCATGGTGGCAGCTTGGCATCCTTGGCA +
Preference number: 2 (lower is better)
Translates to: IPGPRNCETYPRNTG*WESQDHGGSLASLA
Trigger: TGCCAAGGATGCCAAGCTGCCACCATGGTCTTGGCTCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR CAA 90 bp AATGCTATTACGTTTGAAACTGCCAGCGCTTCTTTGCTTCTGCACTaGGCTTGCGGATCCGTGGCGAGTTCGTCCACTGTTACAGTGGCC +
Preference number: 2 (lower is better)
Translates to: NAITFETASASLLLH*ACGSVASSSTVTVA
Trigger: GGCCACTGTAACAGTGGACGAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACGTAATAGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR GCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGTACTGGCCAAGCTGTTaGCTCGGAAGAGAGTCTGCA +
Preference number: 2 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQYWPSC*LGRESA
Trigger: TGCAGACTCTCTTCCGAGGCAACAGCTTGGCCAGTA...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR CCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGTCTGCTGTACTGCCTTaGGTTTCGGGCCCCTGTTTT +
Preference number: 2 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQSAVLP*VSGPCF
Trigger: AAAACAGGGGCCCGAAACCCAAGGCAGTACAGCAGA...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR CCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGTGCCATTCGTATTGCTaGGTGTGCTCCACAACCTTG +
Preference number: 2 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQCHSYC*VCSTTL
Trigger: CAAGGTTGTGGAGCACACCCAGCAATACGAATGGCA...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR CCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGAGGCTTTCAGCAGCCTaGCCATCTTCCATTTTGGCT +
Preference number: 2 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQRLSAA*PSSILA
Trigger: AGCCAAAATGGAAGATGGCCAGGCTGCTGAAAGCCT...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR CCA 90 bp AGCTACCCAAAAGAGGGCTTTGTGCAGAGGCGAGTCCTTATTAAGAAGTGGCTGGCTAGTTCTGTCCACTaGTCCAGCCACTTGCACGTT +
Preference number: 2 (lower is better)
Translates to: SYPKEGFVQRRVLIKKWLASSVH*SSHLHV
Trigger: AACGTGCAAGTGGCTGGACCAGTGGACAGAACTAGC...CAGCCACTTCTTAATAAGGACTCGCCTCTGCACAAAGCCCTCTTTTGGGTAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CAA 90 bp CACGATCTTCTTAATGCTATTACGTTTGAAACTGCCAGCGCTTCTTaGCTTCTGCACTTGGCTTGCGGATCCGTGGCGAGTTCGTCCACT +
Preference number: 2 (lower is better)
Translates to: HDLLNAITFETASAS*LLHLACGSVASSST
Trigger: AGTGGACGAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACGTAATAGCATTAAGAAGATCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR CCA 90 bp TCGTCCACTGTTACAGTGGCCAGTGGTAGGGGAGAGTTCAACGTTCTCCTTGTCCAACAGGAAAGACTTTaGGAAACACAACACTGGCCT +
Preference number: 2 (lower is better)
Translates to: SSTVTVASGRGEFNVLLVQQERL*ETQHWP
Trigger: AGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTG...GACAAGGAGAACGTTGAACTCTCCCCTACCACTGGCCACTGTAACAGTGGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR TCA 90 bp ACCAGTCCATGTGTGGAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTAAGAAACATCAAGGGAATTGTTaGAGGACAGCATCAGCATGT +
Preference number: 2 (lower is better)
Translates to: TSPCVEALRESGPVATKKHQGNC*RTASAC
Trigger: ACATGCTGATGCTGTCCTTCAACAATTCCCTTGATG...TTTCTTAGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTCCACACATGGACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR-3UTR TCA 90 bp GTCTATGAAAACAAGCCTTTTGCTACCTTTGAGGCCAGTCAGCAGCCGCTCATGACTTGGTGTACTCCCTaGCCCAGGAGTTACAGTTAT +
Preference number: 2 (lower is better)
Translates to: VYENKPFATFEASQQPLMTWCTP*PRSYSY
Trigger: ATAACTGTAACTCCTGGGTCAGGGAGTACACCAAGT...CATGAGCGGCTGCTGACTGGCCTCAAAGGTAGCAAAAGGCTTGTTTTCATAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR TCA 90 bp TTATGCACAACAGGAAAGACTTTGGGAAACACAACACTGGCCTCTGCTAAGTATGCCTTTTGCTACCTTTaGGGCCAGTCAGCAGCCGCT +
Preference number: 2 (lower is better)
Translates to: LCTTGKTLGNTTLASAKYAFCYL*GQSAAA
Trigger: AGCGGCTGCTGACTGGCCTCAAAGGTAGCAAAAGGC...ATACTTAGCAGAGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGTGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR TCA 90 bp TCGTCCACTGTTACAGTGGCCAGTGGTAGGGGAGAGTTCAACGTTCTCCTTGTCTGCTTTATCTGCCCATaGGACACTCGTTTGCTAATA +
Preference number: 2 (lower is better)
Translates to: SSTVTVASGRGEFNVLLVCFICP*DTRLLI
Trigger: TATTAGCAAACGAGTGTCTCATGGGCAGATAAAGCA...GACAAGGAGAACGTTGAACTCTCCCCTACCACTGGCCACTGTAACAGTGGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR TCA 90 bp GTGGCGAGTTCGTCCACTGTTACAGTGGCCAGTGGTAGGGGAGAGTTCAACGTTAGGAGCCTTTGTGTCTaGTATCAAGTGATCAAAACT +
Preference number: 2 (lower is better)
Translates to: VASSSTVTVASGRGEFNVRSLCV*YQVIKT
Trigger: AGTTTTGATCACTTGATATCAGACACAAAGGCTCCT...AACGTTGAACTCTCCCCTACCACTGGCCACTGTAACAGTGGACGAACTCGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR GCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGAAATGTAAGACTCGGTaGCATTCGTATTGCTGGGTG +
Preference number: 2 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQKCKTR*HSYCWV
Trigger: CACCCAGCAATACGAATGGCACCGAGTCTTACATTT...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR CCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGAAGAGCTCTGTGCAAATaGCTTTCATCACTGGCCAGT +
Preference number: 2 (lower is better)
Translates to: FQGLETVKLTPETLGCGRRALCK*LSSLAS
Trigger: ACTGGCCAGTGATGAAAGCCATTTGCACAGAGCTCT...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR CCA 90 bp GAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTAAGAAAGTAACAACGTGGAAGTTGCTAGGCCCGGTATaGGTAAGGTCCACTACAATT +
Preference number: 2 (lower is better)
Translates to: EALRESGPVATKKVTTWKLLGPV*VRSTTI
Trigger: AATTGTAGTGGACCTTACCCATACCGGGCCTAGCAA...CTTCCACGTTGTTACTTTCTTAGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR TCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGGCACACGAACATACCTaGCCAGATTTAACATCATTG +
Preference number: 2 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQAHEHT*PDLTSL
Trigger: CAATGATGTTAAATCTGGTCAGGTATGTTCGTGTGC...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR GCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTAGGGCAACTAAGGGCATaGCCCTCGGATGGGAGTACT +
Preference number: 2 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLGQLRA*PSDGST
Trigger: AGTACTCCCATCCGAGGGGCATGCCCTTAGTTGCCC...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR GCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTACAAACCTGGGAGGGTTaGTGGCTGGCACTCTGTCTC +
Preference number: 2 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLQTWEG*WLALCL
Trigger: GAGACAGAGTGCCAGCCAGCAACCCTCCCAGGTTTG...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR GCA 90 bp GTGGCGAGTTCGTCCACTGTTACAGTGGCCAGTGGTAGGGGAGAGTTCAACGTTTTCATAATCAGTTTCTaGTACTCTCCTCATTTTGGG +
Preference number: 2 (lower is better)
Translates to: VASSSTVTVASGRGEFNVFIISF*YSPHFG
Trigger: CCCAAAATGAGGAGAGTAGCAGAAACTGATTATGAA...AACGTTGAACTCTCCCCTACCACTGGCCACTGTAACAGTGGACGAACTCGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR GCA 90 bp TCGTCCACTGTTACAGTGGCCAGTGGTAGGGGAGAGTTCAACGTTCTCCTTGTCTTACGTAAATGTGGGTaGTGTTGTGATGAGGAAATC +
Preference number: 2 (lower is better)
Translates to: SSTVTVASGRGEFNVLLVLRKCG*CCDEEI
Trigger: GATTTCCTCATCACAACAGCACCCACATTTACGTAA...GACAAGGAGAACGTTGAACTCTCCCCTACCACTGGCCACTGTAACAGTGGACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR CCA 90 bp ACAAATTATGCACAACAGGAAAGACTTTGGGAAACACAACACTGGCCTCTGCTAATGGCTTCACACTCCTaGTGCATGAAGGTGAGCGGC +
Preference number: 2 (lower is better)
Translates to: TNYAQQERLWETQHWPLLMASHS*CMKVSG
Trigger: GCCGCTCACCTTCATGCACCAGGAGTGTGAAGCCAT...TAGCAGAGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGTGCATAATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CAA 90 bp GACCGTAAACTCGGGTCAGAACTGCCTAAATTAAGTAATGCGATATaGAGCAGTGTCCCAGGGACATCTTTTGGCCGAATCTTGGTGTGT +
Preference number: 2 (lower is better)
Translates to: DRKLGSELPKLSNAI*SSVPGTSFGRILVC
Trigger: ACACACCAAGATTCGGCCAAAAGATGTCCCTGGGACACTGCTCAATATCGCATTACTTAATTTAGGCAGTTCTGACCCGAGTTTACGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR TCA 90 bp TCTTCTTGTTGGCATCTTGATCAGAATTGTATTAAGCCAGTTCATTTATTTGGGCACATGCCTGCGTGCTaGGCAGTGCTCCCAGGCTGT +
Preference number: 2 (lower is better)
Translates to: SSCWHLDQNCIKPVHLFGHMPAC*AVLPGC
Trigger: ACAGCCTGGGAGCACTGCTCAGCACGCAGGCATGTG...CCCAAATAAATGAACTGGCTTAATACAATTCTGATCAAGATGCCAACAAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
3UTR-3UTR TCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGCCTTGCACTGCTTTATaGAGTGTTTCACCAAACATA +
Preference number: 2 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQPCTAL*SVSPNI
Trigger: TATGTTTGGTGAAACACTTCATAAAGCAGTGCAAGG...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR TCA 90 bp TCGTCCACTGTTACAGTGGCCAGTGGTAGGGGAGAGTTCAACGTTCTCCTTGTCCAAGTACACAGAGAGTaGATGATATTAATGACCAGT +
Preference number: 2 (lower is better)
Translates to: SSTVTVASGRGEFNVLLVQVHRE*MILMTS
Trigger: ACTGGTCATTAATATCATTCACTCTCTGTGTACTTG...GACAAGGAGAACGTTGAACTCTCCCCTACCACTGGCCACTGTAACAGTGGACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR GCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGTTTATAACTGCTAACTaGGCAACCTTCTTTAGGGCT +
Preference number: 2 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQFITAN*ATFFRA
Trigger: AGCCCTAAAGAAGGTTGCGCAGTTAGCAGTTATAAA...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR CCA 90 bp GAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTAAGAAAGTAACAACGTGGAAGTCTGCTGAAGTTACTTaGACAGCAGTAGAACCAACT +
Preference number: 2 (lower is better)
Translates to: EALRESGPVATKKVTTWKSAEVT*TAVEPT
Trigger: AGTTGGTTCTACTGCTGTCCAAGTAACTTCAGCAGA...CTTCCACGTTGTTACTTTCTTAGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR CCA 90 bp TGCAGGTTTTGTTCAAGAAGTGCGGTACCTGCTGAATACAAGTTGACCTCATCACCCAGGGACATCTTTTaGCCGAATCTTGGTGTGTTG +
Preference number: 2 (lower is better)
Translates to: CRFCSRSAVPAEYKLTSSPRDIF*PNLGVL
Trigger: CAACACACCAAGATTCGGCCAAAAGATGTCCCTGGG...TGATGAGGTCAACTTGTATTCAGCAGGTACCGCACTTCTTGAACAAAACCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CAA 90 bp TTGGCTGCCAGTGTCTTACTAATAGAGACAATAAAGAGGGTGTTGTaGGCAGGGATACATAAACCTGATGTCTCTAGTAACTGGCCCTCG +
Preference number: 2 (lower is better)
Translates to: LAASVLLIETIKRVL*AGIHKPDVSSNWPS
Trigger: CGAGGGCCAGTTACTAGAGACATCAGGTTTATGTATCCCTGCCAACAACACCCTCTTTATTGTCTCTATTAGTAAGACACTGGCAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR TCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAGGCTTCGAAGAGTTaGTCATCTGGCAACATGGCA +
Preference number: 2 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAKASKS*SSGNMA
Trigger: TGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTT...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
3UTR-3UTR TCA 90 bp GTAAGATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACACTCTGCACGGGTGTTGTGATCCCTaGTTCCATTTCTTGCCTTTT +
Preference number: 2 (lower is better)
Translates to: VRCLVLWWGFFMVHHTLHGCCDP*FHFLPF
Trigger: AAAAGGCAAGAAATGGAATCAGGGATCACAACACCC...GTGCAGAGTGTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR-3UTR CCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGAACATGGCAAACCGGATaGGTTCATTATAAAACAGGA +
Preference number: 2 (lower is better)
Translates to: FQGLETVKLTPETLGCGRTWQTG*VHYKTG
Trigger: TCCTGTTTTATAATGAACCCATCCGGTTTGCCATGT...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR CCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGTCAGTCTGTGGGATCTaGTACAGTTTTGTAAATTCA +
Preference number: 2 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQSVCGI*YSFVNS
Trigger: TGAATTTACAAAACTGTACCAGATCCCACAGACTGA...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR CCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGTCTTGTTTACTTAGGTaGGAGGGATGGGAAATTTAT +
Preference number: 2 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQSCLLR*EGWEIY
Trigger: ATAAATTTCCCATCCCTCCCACCTAAGTAAACAAGA...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR CCA 90 bp GGTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACTTGGTGGGGATTCTTCATaGTACACCACACTCTGCACA +
Preference number: 2 (lower is better)
Translates to: GFFINSRQVRVNQGIKKLGGDSS*YTTLCT
Trigger: TGTGCAGAGTGTGGTGTACCATGAAGAATCCCCACC...AAGTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR CAA 90 bp TCATTGGCTGCCAGTGTCTTACTAATAGAGACAATAAAGAGGGTGTaGTTGGCAGGGATACATAAACCTGATGTCTCTAGTAACTGGCCC +
Preference number: 2 (lower is better)
Translates to: SLAASVLLIETIKRV*LAGIHKPDVSSNWP
Trigger: GGGCCAGTTACTAGAGACATCAGGTTTATGTATCCCTGCCAACAACACCCTCTTTATTGTCTCTATTAGTAAGACACTGGCAGCCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CAA 90 bp AAGAAAGCAAGCAAGCTTCACACGATCTTCTTAATGCTATTACGTTaGAAACTGCCAGCGCTTCTTTGCTTCTGCACTTGGCTTGCGGAT +
Preference number: 2 (lower is better)
Translates to: KKASKLHTIFLMLLR*KLPALLCFCTWLAD
Trigger: ATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACGTAATAGCATTAAGAAGATCGTGTGAAGCTTGCTTGCTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR TCA 90 bp GTATATTTTACCAGTGTAGCTAGAACAGTAAGAAGCAGCGCCTGGATCTTCGGAGGGTGTTGTGATCCCTaGTTCCATTTCTTGCCTTTT +
Preference number: 2 (lower is better)
Translates to: VYFTSVARTVRSSAWIFGGCCDP*FHFLPF
Trigger: AAAAGGCAAGAAATGGAATCAGGGATCACAACACCC...TCCGAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACTGGTAAAATATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR-3UTR TCA 90 bp CTGGTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACCTTTGTGAGCTAGCTTaGGAGCATTGTGGAATACCT +
Preference number: 2 (lower is better)
Translates to: LVSSSIPGRYVSIKASRNLCELA*EHCGIP
Trigger: AGGTATTCCACAATGCTCTCAAGCTAGCTCACAAAG...GTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR CCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCGATCATCTGGCAACATaGCAAACCGGATGGGTTCAT +
Preference number: 2 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRDHLAT*QTGWVH
Trigger: ATGAACCCATCCGGTTTGCCATGTTGCCAGATGATC...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
3UTR-3UTR CCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCGAAGAGTTGATCATCTaGCAACATGGCAAACCGGAT +
Preference number: 2 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAEELII*QHGKPD
Trigger: ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTC...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
3UTR-3UTR CCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTAGCAGCTTGGCATCCTTaGCACTGGGTTACTGATCTA +
Preference number: 2 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLAAWHP*HWVTDL
Trigger: TAGATCAGTAACCCAGTGCCAAGGATGCCAAGCTGC...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR CCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTATTACCCCAGAAACACTaGGTTGTGGGAGAGCCAAGA +
Preference number: 2 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLLPQKH*VVGEPR
Trigger: TCTTGGCTCTCCCACAACCCAGTGTTTCTGGGGTAA...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR CCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGCATCAACCACGTCTTTaGATATATCCTGGATTATTT +
Preference number: 2 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQHQPRL*IYPGLF
Trigger: AAATAATCCAGGATATATCCAAAGACGTGGTTGATG...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR CCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGACATTATTAGAATCATaGTCTCAAAACGGTCTCCAA +
Preference number: 2 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQTLLES*SQNGLQ
Trigger: TTGGAGACCGTTTTGAGACCATGATTCTAATAATGT...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR CCA 90 bp ACAAATTATGCACAACAGGAAAGACTTTGGGAAACACAACACTGGCCTCTGCTACAGCCACTTGCACGTTaGAATATCTCTCATGCATGC +
Preference number: 2 (lower is better)
Translates to: TNYAQQERLWETQHWPLLQPLAR*NISHAC
Trigger: GCATGCATGAGAGATATTCCAACGTGCAAGTGGCTG...TAGCAGAGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGTGCATAATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR TCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAAAGGCTTCGAAGAGTTaGTCATCTGGCAACATGGCA +
Preference number: 2 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTKASKS*SSGNMA
Trigger: TGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTT...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
3UTR-3UTR GCA 90 bp TTGCTTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCTCCCAAGCCACCTGTTaGACTGGTTTTGATGAAACT +
Preference number: 2 (lower is better)
Translates to: LLETNFTFPEAKATAVSASQATC*TGFDET
Trigger: AGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGA...GGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR-3UTR GCA 90 bp ACTTTGCAGGTAAGATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACAGCTACAGCAGTATCTaGCATCACCTCAGCTTTTAT +
Preference number: 2 (lower is better)
Translates to: TLQVRCLVLWWGFFMVHHSYSSI*HHLSFY
Trigger: ATAAAAGCTGAGGTGATGGCAGATACTGCTGTAGCT...GTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTACCTGCAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR GCA 90 bp ACTGGTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAATGGTACACCACACTCTaGACAATTCCATGGATTGGA +
Preference number: 2 (lower is better)
Translates to: TGFFINSRQVRVNQGIKKWYTTL*TIPWIG
Trigger: TCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCA...TTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAACCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR-3UTR GCA 90 bp ACCTCAGCTTTTATTGATCCCAAGCCACCTGTTGCACTGGTTTTGATGAAACTGGTTATAGATATAGACTaGGGAGACGTTGTCGTAAGC +
Preference number: 2 (lower is better)
Translates to: TSAFIDPKPPVALVLMKLVIDID*GDVVVS
Trigger: GCTTACGACAACGTCTCCGCAGTCTATATCTATAAC...CAGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGATCAATAAAAGCTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR GCA 90 bp ACAAATTATGCACAACAGGAAAGACTTTGGGAAACACAACACTGGCCTCTGCTAGTGTGGCTCATTGGCTaGCAGTGTCTTACTAATAGA +
Preference number: 2 (lower is better)
Translates to: TNYAQQERLWETQHWPLLVWLIG*QCLTNR
Trigger: TCTATTAGTAAGACACTGGCAGCCAATGAGCCACAC...TAGCAGAGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGTGCATAATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR CCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAGATCATCTGGCAACATaGCAAACCGGATGGGTTCAT +
Preference number: 2 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTDHLAT*QTGWVH
Trigger: ATGAACCCATCCGGTTTGCCATGTTGCCAGATGATC...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
3UTR CAA 90 bp ATCACCTCAGCTTTTATTGATCCCAAGCCACCTGTTGCACTGGTTTaGATGAAACTGTCTAGTACAACATCAAGCAGATCTGTAATCTGC +
Preference number: 2 (lower is better)
Translates to: ITSAFIDPKPPVALV*MKLSSTTSSRSVIC
Trigger: GCAGATTACAGATCTGCTTGATGTTGTACTAGACAGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR CAA 90 bp GTGGGGATTCTTCATGGTACACCACACTCTGCACAATTCCATGGATaGGATTTAACAAATTTGGATCTTGGCACAATGATAACAGGGTGT +
Preference number: 2 (lower is better)
Translates to: VGILHGTPHSAQFHG*DLTNLDLGTMITGC
Trigger: ACACCCTGTTATCATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCATGAAGAATCCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR CAA 90 bp GGAAAAACAACAAACCACTTAGAGAGAAAGTCTGTTTTAAAGCGATaGCTAGGCCCGGTATGGGTAAGGTCCACTACAATTTCATATGGC +
Preference number: 2 (lower is better)
Translates to: GKTTNHLERKSVLKR*LGPVWVRSTTISYG
Trigger: GCCATATGAAATTGTAGTGGACCTTACCCATACCGGGCCTAGCAATCGCTTTAAAACAGACTTTCTCTCTAAGTGGTTTGTTGTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CAA 90 bp CCAGAAATACACTCTTCCAAAAATTCTAACGTGAGGTGTGGCTCATaGGCTGCCAGTGTCTTACTAATAGAGACAATAAAGAGGGTGTTG +
Preference number: 2 (lower is better)
Translates to: PEIHSSKNSNVRCGS*AASVLLIETIKRVL
Trigger: CAACACCCTCTTTATTGTCTCTATTAGTAAGACACTGGCAGCCAATGAGCCACACCTCACGTTAGAATTTTTGGAAGAGTGTATTTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR GCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTATGTAGACAAAGGAACTaGCAAAGTTTAGGCCCGGAT +
Preference number: 2 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLCRQRN*QSLGPD
Trigger: ATCCGGGCCTAAACTTTGGCAGTTCCTTTGTCTACA...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR GCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTATTAATTCTGCTGTACTaGCTTGGGTTTCGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLLILLY*LGFRAP
Trigger: AGGGGCCCGAAACCCAAGGCAGTACAGCAGAATTAA...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR GCA 90 bp TTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCATCATCCCAAGCCACCTGTTaGACTGGTTTTGATGAAACT +
Preference number: 2 (lower is better)
Translates to: LKPISHFQKPKLQQYLPSSQATC*TGFDET
Trigger: AGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGA...TGATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR-3UTR GCA 90 bp ACTTTGCAGGTAAGATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACTTACGTAAATGTGGGTaGTGTTGTGATGAGGAAATC +
Preference number: 2 (lower is better)
Translates to: TLQVRCLVLWWGFFMVHHLRKCG*CCDEEI
Trigger: GATTTCCTCATCACAACAGCACCCACATTTACGTAA...GTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTACCTGCAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR-3UTR CCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCACATGGCAAACCGGATaGGTTCATTATAAAACAGGA +
Preference number: 2 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHATWQTG*VHYKTG
Trigger: TCCTGTTTTATAATGAACCCATCCGGTTTGCCATGT...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
3UTR-3UTR CCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTAAGAAACACTGGGTTGTaGGAGAGCCAAGACCATGGT +
Preference number: 2 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLRNTGL*ESQDHG
Trigger: ACCATGGTCTTGGCTCTCCCACAACCCAGTGTTTCT...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR CCA 90 bp CTTCTTGTTGGCATCTTGATCAGAATTGTATTAAGCCAGTTCATTTATTTGGGATTGGCCTTCCAGTGTTaGGATTACACGCGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: LLVGILIRIVLSQFIYLGLAFQC*DYTREP
Trigger: TGGCTCACGCGTGTAATCCCAACACTGGAAGGCCAA...TCCCAAATAAATGAACTGGCTTAATACAATTCTGATCAAGATGCCAACAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
3UTR-3UTR CCA 90 bp CTTTGGGAAACACAACACTGGCCTCTGCTAAGTATTCATAAAGAATTCGTTGATGTAAGAAGCAGCGCCTaGATCTTCGGATCAGTAAGT +
Preference number: 2 (lower is better)
Translates to: LWETQHWPLLSIHKEFVDVRSSA*IFGSVS
Trigger: ACTTACTGATCCGAAGATCCAGGCGCTGCTTCTTAC...ATCAACGAATTCTTTATGAATACTTAGCAGAGGCCAGTGTTGTGTTTCCCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR CAA 90 bp ATCTTATTCTGGGAATTCTGGACATCCAACACCATAACCCATAACTaGGGCTTTAAGTTAGTTAGACATCCATTCATCCACCCACCCATT +
Preference number: 2 (lower is better)
Translates to: ILFWEFWTSNTITHN*GFKLVRHPFIHPPI
Trigger: AATGGGTGGGTGGATGAATGGATGTCTAACTAACTTAAAGCCCAAGTTATGGGTTATGGTGTTGGATGTCCAGAATTCCCAGAATAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR TCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTAATGGTGTCAAGTCACTaGGGCTTGACCTCTATGGTT +
Preference number: 2 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLMVSSH*GLTSMV
Trigger: AACCATAGAGGTCAAGCCTCAGTGACTTGACACCAT...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR TCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTCAACACTTTGTTCACTaGTTACCCTGCTCAGAATTA +
Preference number: 2 (lower is better)
Translates to: KSSNETALQETPLSPRFIQHFVH*LPCSEL
Trigger: TAATTCTGAGCAGGGTAATCAGTGAACAAAGTGTTG...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR TCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTAGCTAGTTCATCCCACTaGGAACAAGGAACCACATTG +
Preference number: 2 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLASSSH*EQGTTL
Trigger: CAATGTGGTTCCTTGTTCTCAGTGGGATGAACTAGC...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR GCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGTACCCAGTTCCAAAATaGCTTTTCCAGGCTATTTAT +
Preference number: 2 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSYPVPK*LFQAIY
Trigger: ATAAATAGCCTGGAAAAGGCATTTTGGAACTGGGTA...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR GCA 90 bp AGTCTGGAATTTGTGTTTGCTTTGAAAACGGTCCTGCAAACCGCCACAAGCCATTTGGCATCATCATTATaGTTGCAAAAACGAACTAGA +
Preference number: 2 (lower is better)
Translates to: SLEFVFALKTVLQTATSHLASSL*LQKRTR
Trigger: TCTAGTTCGTTTTTGCAAGCATAATGATGATGCCAA...ATGGCTTGTGGCGGTTTGCAGGACCGTTTTCAAAGCAAACACAAATTCCAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR GCA 90 bp TGCAGGTTTTGTTCAAGAAGTGCGGTACCTGCTGAATACAAGTTGACCTCATCAGCTTCCCCATATTTTTaGTTGAATAGATGGGTACAT +
Preference number: 2 (lower is better)
Translates to: CRFCSRSAVPAEYKLTSSASPYF*LNRWVH
Trigger: ATGTACCCATCTATTCAAGCAAAAATATGGGGAAGC...TGATGAGGTCAACTTGTATTCAGCAGGTACCGCACTTCTTGAACAAAACCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR GCA 90 bp ACTTTGCAGGTAAGATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACTTCATAATCAGTTTCTaGTACTCTCCTCATTTTGGG +
Preference number: 2 (lower is better)
Translates to: TLQVRCLVLWWGFFMVHHFIISF*YSPHFG
Trigger: CCCAAAATGAGGAGAGTAGCAGAAACTGATTATGAA...GTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTACCTGCAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR-3UTR CCA 90 bp CTTCTTGTTGGCATCTTGATCAGAATTGTATTAAGCCAGTTCATTTATTTGGGATCCAACCCAGGACTGTaGTCTGTCTCTCCATTTGCT +
Preference number: 2 (lower is better)
Translates to: LLVGILIRIVLSQFIYLGSNPGL*SVSPFA
Trigger: AGCAAATGGAGAGACAGACCACAGTCCTGGGTTGGA...TCCCAAATAAATGAACTGGCTTAATACAATTCTGATCAAGATGCCAACAAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
3UTR-3UTR CCA 90 bp ACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGATCTTGGCACAATGTAAGAAGCAGCGCCTaGATCTTCGGATCAGTAAGT +
Preference number: 2 (lower is better)
Translates to: TLCTIPWIGFNKFGSWHNVRSSA*IFGSVS
Trigger: ACTTACTGATCCGAAGATCCAGGCGCTGCTTCTTAC...ATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR-3UTR CCA 90 bp AACAAATTTGGATCTTGGCACAATGATAACAGGGTGTTGATCTTAGAGTCCAACCAACAGGAAAGACTTTaGGAAACACAACACTGGCCT +
Preference number: 2 (lower is better)
Translates to: NKFGSWHNDNRVLILESNQQERL*ETQHWP
Trigger: AGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTG...GTTGGACTCTAAGATCAACACCCTGTTATCATTGTGCCAAGATCCAAATTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR-3UTR TCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTATTGGCACTGGGTTACTaGTCTATTTCTAAACACAGT +
Preference number: 2 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLLALGY*SISKHS
Trigger: ACTGTGTTTAGAAATAGATCAGTAACCCAGTGCCAA...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR TCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTATGCTGCTCTTCCTGTTaGCATCATATTGCTGACAGA +
Preference number: 2 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLCCSSC*HHIADR
Trigger: TCTGTCAGCAATATGATGTCAACAGGAAGAGCAGCA...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR GCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTAACCTCCCACTTTCTTTaGAGTTGTTCTGAACACTTA +
Preference number: 2 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLTSHFL*SCSEHL
Trigger: TAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR GCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAGAAGGCAGAGCTCTGTaGAAATGGCTTTCATCACTG +
Preference number: 2 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHREGRAL*KWLSSL
Trigger: CAGTGATGAAAGCCATTTGCACAGAGCTCTGCCTTC...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR GCA 90 bp GATCCCAAGCCACCTGTTGCACTGGTTTTGATGAAACTGTCTAGTACAACATCATTGGCATCATCATTATaGTTGCAAAAACGAACTAGA +
Preference number: 2 (lower is better)
Translates to: DPKPPVALVLMKLSSTTSLASSL*LQKRTR
Trigger: TCTAGTTCGTTTTTGCAAGCATAATGATGATGCCAA...TGATGTTGTACTAGACAGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR-3UTR CCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCGAAGAGTTGATCATCTaGCAACATGGCAAACCGGAT +
Preference number: 2 (lower is better)
Translates to: VEFNLLKSSNETALQETPEELII*QHGKPD
Trigger: ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTC...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR CCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTAGCCATATCAGTCTGTaGGATCTGGTACAGTTTTGT +
Preference number: 2 (lower is better)
Translates to: IISGHKIRRMICSGQTAASHISL*DLVQFC
Trigger: ACAAAACTGTACCAGATCCCACAGACTGATATGGCT...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR CCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTAGGGCCCCTGTTTTCTTaGATTACAAAGCAAGAGCTT +
Preference number: 2 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLGPLFS*ITKQEL
Trigger: AAGCTCTTGCTTTGTAATCCAAGAAAACAGGGGCCC...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR CAA 90 bp AAAGTTAAAGTTAGAGTTGAAATTGAGTCCAACAAAATGATCCATTaGCTTGCAGTGCCACTCCAGAGGATTCCGGATTGCCATAAATAC +
Preference number: 2 (lower is better)
Translates to: KVKVRVEIESNKMIH*LAVPLQRIPDCHKY
Trigger: GTATTTATGGCAATCCGGAATCCTCTGGAGTGGCACTGCAAGCAAATGGATCATTTTGTTGGACTCAATTTCAACTCTAACTTTAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR TCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTACAGTTAAAAGTTTCCTaGCCTCCCACTTTCTTTGCA +
Preference number: 2 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLQLKVS*PPTFFA
Trigger: TGCAAAGAAAGTGGGAGGTCAGGAAACTTTTAACTG...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR TCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCATCCACTATAAAATATaGAATTTCCCTGCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: VEFNLLKSSNETALQETPIHYKI*NFPALP
Trigger: GGGGAGGGCAGGGAAATTTCATATTTTATAGTGGAT...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR TCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTATCATTTCAGGCGGTATaGAATACTACACCCTTGGTA +
Preference number: 2 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLSFQAV*NTTPLV
Trigger: TACCAAGGGTGTAGTATTTCATACCGCCTGAAATGA...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR GCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTACTGCTTTACGTTTGGTaGTTTCAGCAAAACCATCCA +
Preference number: 2 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLLLYVW*FQQNHP
Trigger: TGGATGGTTTTGCTGAAAGCACCAAACGTAAAGCAG...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR GCA 90 bp ACCTTGCTTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCTTCCCCATATTTTTaGTTGAATAGATGGGTACAT +
Preference number: 2 (lower is better)
Translates to: TLLETNFTFPEAKATAVSASPYF*LNRWVH
Trigger: ATGTACCCATCTATTCAAGCAAAAATATGGGGAAGC...AGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAAGCAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR-3UTR GCA 90 bp AAGCATGTCTTGTCAATTATTTTGCACATCCTTCCAATAACCTTGCTTGAAACCAGCTACAGCAGTATCTaGCATCACCTCAGCTTTTAT +
Preference number: 2 (lower is better)
Translates to: KHVLSIILHILPITLLETSYSSI*HHLSFY
Trigger: ATAAAAGCTGAGGTGATGGCAGATACTGCTGTAGCT...GGTTTCAAGCAAGGTTATTGGAAGGATGTGCAAAATAATTGACAAGACATGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR-3UTR CCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAGAAGAGTTGATCATCTaGCAACATGGCAAACCGGAT +
Preference number: 2 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHREELII*QHGKPD
Trigger: ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTC...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR CCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTAAATGGCTTTCATCACTaGCCAGTAGTAGCAGTATTC +
Preference number: 2 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLNGFHH*PVVAVF
Trigger: GAATACTGCTACTACTGGCCAGTGATGAAAGCCATT...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR CCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTATCAATTACGCAGAAATaGGCAACTTGGTCTAAACTT +
Preference number: 2 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLSITQK*ATWSKL
Trigger: AAGTTTAGACCAAGTTGCCCATTTCTGCGTAATTGA...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR CCA 90 bp TTTGTCTGGATACACTCTCTTCTTGTTGGCATCTTGATCAGAATTGTATTAAGCAGGCATAAGCCACCATaGCCGGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: FVWIHSLLVGILIRIVLSRHKPP*PANFCI
Trigger: AATACAAAAATTAGCCGGCCATGGTGGCTTATGCCT...GCTTAATACAATTCTGATCAAGATGCCAACAAGAAGAGAGTGTATCCAGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422121.2
3UTR CAA 90 bp GTCATTGTTATCAGCTTGTCAAGAATAGCAGTAACTCTTTGTCGTTaGGCATCATCATTATGCTTGCAAAAACGAACTAGATTTGACAGC +
Preference number: 2 (lower is better)
Translates to: VIVISLSRIAVTLCR*ASSLCLQKRTRFDS
Trigger: GCTGTCAAATCTAGTTCGTTTTTGCAAGCATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTTGACAAGCTGATAACAATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR-3UTR TCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTATTGGCACTGGGTTACTaGTCTATTTCTAAACACAGT +
Preference number: 2 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLLALGY*SISKHS
Trigger: ACTGTGTTTAGAAATAGATCAGTAACCCAGTGCCAA...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR TCA 90 bp TCATTGAATATACGGAGACTATCTAAAGTATGCAGGTTTTGTTCAAGAAGTGCGCCCCATATTTTTGCTTaGATAGATGGGTACATCTGT +
Preference number: 2 (lower is better)
Translates to: SLNIRRLSKVCRFCSRSAPHIFA*IDGYIC
Trigger: ACAGATGTACCCATCTATTCAAGCAAAAATATGGGG...CGCACTTCTTGAACAAAACCTGCATACTTTAGATAGTCTCCGTATATTCAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR GCA 90 bp TTCTACAAAGTAATAAATCATTCAGCTGATTCTGAACATCTCCATCTACAGGCAACTATAGATGGTATATaGGAGAGCCTTACCTTCCTG +
Preference number: 2 (lower is better)
Translates to: FYKVINHSADSEHLHLQATIDGI*ESLTFL
Trigger: CAGGAAGGTAAGGCTCTCGCATATACCATCTATAGT...TGCCTGTAGATGGAGATGTTCAGAATCAGCTGAATGATTTATTACTTTGTAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490416.2
3UTR-3UTR GCA 90 bp TCATTGAATATACGGAGACTATCTAAAGTATGCAGGTTTTGTTCAAGAAGTGCGTTTAGAAAGACTGATTaGCCTAGGACTTTTGTTCGC +
Preference number: 2 (lower is better)
Translates to: SLNIRRLSKVCRFCSRSAFRKTD*PRTFVR
Trigger: GCGAACAAAAGTCCTAGGGCAATCAGTCTTTCTAAA...CGCACTTCTTGAACAAAACCTGCATACTTTAGATAGTCTCCGTATATTCAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CAA 90 bp TTTGTCGTTTGGCATCATCATTATGCTTGCAAAAACGAACTAGATTaGACAGCCATGGAGTCATGTATTCCAAACAAAGGTGTTTCAATT +
Preference number: 2 (lower is better)
Translates to: FVVWHHHYACKNELD*TAMESCIPNKGVSI
Trigger: AATTGAAACACCTTTGTTTGGAATACATGACTCCATGGCTGTCAAATCTAGTTCGTTTTTGCAAGCATAATGATGATGCCAAACGACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR GCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAACCTCCCACTTTCTTTaGAGTTGTTCTGAACACTTA +
Preference number: 2 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRTSHFL*SCSEHL
Trigger: TAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR CCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAACATGGCAAACCGGATaGGTTCATTATAAAACAGGA +
Preference number: 2 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRTWQTG*VHYKTG
Trigger: TCCTGTTTTATAATGAACCCATCCGGTTTGCCATGT...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR CAA 90 bp TCCAAAGATCATTTTGTCTGGATACACTCTCTTCTTGTTGGCATCTaGATCAGAATTGTATTAAGCCAGTTCATTTATTTGGGAAGATCT +
Preference number: 2 (lower is better)
Translates to: SKDHFVWIHSLLVGI*IRIVLSQFIYLGRS
Trigger: AGATCTTCCCAAATAAATGAACTGGCTTAATACAATTCTGATCAAGATGCCAACAAGAAGAGAGTGTATCCAGACAAAATGATCTTTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422121.2
3UTR CAA 90 bp ATAGATGGGTACATCTGTTTTTCATTGATGGTCATTGTTATCAGCTaGTCAAGAATAGCAGTAACTCTTTGTCGTTTGGCATCATCATTA +
Preference number: 2 (lower is better)
Translates to: IDGYICFSLMVIVIS*SRIAVTLCRLASSL
Trigger: TAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTTGACAAGCTGATAACAATGACCATCAATGAAAAACAGATGTACCCATCTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR-3UTR TCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGACCAGTCTTTTCACAGTaGTTAAATGCAATTCTAGCA +
Preference number: 2 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRPVFSQ*LNAILA
Trigger: TGCTAGAATTGCATTTAATCACTGTGAAAAGACTGG...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR CCA 90 bp AAAAATTTTAAGAGCCTCCTAGAATTACCAGTTGTCATGGTGCCAATTTCACTATTCAGTAGCACTATATaGACACATACCCTAAGTACA +
Preference number: 2 (lower is better)
Translates to: KNFKSLLELPVVMVPISLFSSTI*THTLST
Trigger: TGTACTTAGGGTATGTGTCCATATAGTGCTACTGAA...TAGTGAAATTGGCACCATGACAACTGGTAATTCTAGGAGGCTCTTAAAATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490416.2
3UTR-3UTR CCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTAATCCTGGATTATTTCTaGACACAAGATAAGGAGAAT +
Preference number: 2 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLILDYF*TQDKEN
Trigger: ATTCTCCTTATCTTGTGTCCAGAAATAATCCAGGAT...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR CCA 90 bp TTTGACAGCCATGGAGTCATGTATTCCAAACAAAGGTGTTTCAATTCAATACTAGATGTCTCTAGTAACTaGCCCTCGATTTTTAAATTA +
Preference number: 2 (lower is better)
Translates to: FDSHGVMYSKQRCFNSILDVSSN*PSIFKL
Trigger: TAATTTAAAAATCGAGGGCCAGTTACTAGAGACATC...TAGTATTGAATTGAAACACCTTTGTTTGGAATACATGACTCCATGGCTGTCAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CCA 72 bp CCATGTCCAGGCTCATGGATTTCCTGGCTCGGGGACTaGTCTGGCCGACAGTTGGATAGGTGGCTGCAAGGT +
Preference number: 3 (lower is better)
Translates to: PCPGSWISWLGD*SGRQLDRWLQG
Trigger: ACCTTGCAGCCACCTATCCAACTGTCGGCCAGACCAGTCCCCGAGCCAGGAAATCCATGAGCCTGGACATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CCA 72 bp CCCCAGAAACACTGGGTTGTGGGAGAGCCAAGACCATaGTGGCAGCTTGGCATCCTTGGCACTGGGTTACTG +
Preference number: 3 (lower is better)
Translates to: PQKHWVVGEPRP*WQLGILGTGLL
Trigger: CAGTAACCCAGTGCCAAGGATGCCAAGCTGCCACCATGGTCTTGGCTCTCCCACAACCCAGTGTTTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR CCA 72 bp GTCCCAGGGACATCTTTTGGCCGAATCTTGGTGTGTTaGGGGATAGAGTCGGGCTGTGACAGTTCCCAGCGG +
Preference number: 3 (lower is better)
Translates to: VPGTSFGRILVC*GIESGCDSSQR
Trigger: CCGCTGGGAACTGTCACAGCCCGACTCTATCCCCCAACACACCAAGATTCGGCCAAAAGATGTCCCTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CCA 72 bp GCGCTTCTTTGCTTCTGCACTTGGCTTGCGGATCCGTaGCGAGTTCGTCCACTGTTACAGTGGCCAGTGGTA +
Preference number: 3 (lower is better)
Translates to: ALLCFCTWLADP*RVRPLLQWPVV
Trigger: TACCACTGGCCACTGTAACAGTGGACGAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR TCA 72 bp GAGTCGGGCTGTGACAGTTCCCAGCGGGTCCGGATATaGATGATAGACTGGACAATGGCTTCACACTCCTGG +
Preference number: 3 (lower is better)
Translates to: ESGCDSSQRVRI*MIDWTMASHSW
Trigger: CCAGGAGTGTGAAGCCATTGTCCAGTCTATCATTCATATCCGGACCCGCTGGGAACTGTCACAGCCCGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CCA 72 bp GGATTTCCTGGCTCGGGGACTGGTCTGGCCGACAGTTaGATAGGTGGCTGCAAGGTATCCTTCAGAACCTTT +
Preference number: 3 (lower is better)
Translates to: GFPGSGTGLADS*IGGCKVSFRTF
Trigger: AAAGGTTCTGAAGGATACCTTGCAGCCACCTATCCAACTGTCGGCCAGACCAGTCCCCGAGCCAGGAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR TCA 72 bp CACTCTGTCTCCCCAACTAGGACACAGGATAGAAGCTaGCTGTTTAGGATGTGTCCTGGGCACCTGGCTCAG +
Preference number: 3 (lower is better)
Translates to: HSVSPTRTQDRS*LFRMCPGHLAQ
Trigger: CTGAGCCAGGTGCCCAGGACACATCCTAAACAGTCAGCTTCTATCCTGTGTCCTAGTTGGGGAGACAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR TCA 72 bp CCGAATCTTGGTGTGTTGGGGGATAGAGTCGGGCTGTaGCAGTTCCCAGCGGGTCCGGATATGAATGATAGA +
Preference number: 3 (lower is better)
Translates to: PNLGVLGDRVGL*QFPAGPDMNDR
Trigger: TCTATCATTCATATCCGGACCCGCTGGGAACTGTCACAGCCCGACTCTATCCCCCAACACACCAAGATTCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR GCA 72 bp CAGAGCTGTAGCCACTTTGCCCCAAATCTACTGAACTaGATCTCCATCTGGGCAACTAAGGGCATGCCCCTC +
Preference number: 3 (lower is better)
Translates to: QSCSHFAPNLLN*ISIWATKGMPL
Trigger: GAGGGGCATGCCCTTAGTTGCCCAGATGGAGATGCAGTTCAGTAGATTTGGGGCAAAGTGGCTACAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR CCA 72 bp CGTTTGAAACTGCCAGCGCTTCTTTGCTTCTGCACTTaGCTTGCGGATCCGTGGCGAGTTCGTCCACTGTTA +
Preference number: 3 (lower is better)
Translates to: RLKLPALLCFCT*LADPWRVRPLL
Trigger: TAACAGTGGACGAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR CAA 90 bp GTGGCGAGTTCGTCCACTGTTACAGTGGCCAGTGGTAGGGGAGAGTTCAACGTTGCTAGCTTGAGAGCATaGTGGAATACCTTCAGGTCC +
Preference number: 3 (lower is better)
Translates to: VASSSTVTVASGRGEFNVASLRA*WNTFRS
Trigger: GGACCTGAAGGTATTCCACAATGCTCTCAAGCTAGC...AACGTTGAACTCTCCCCTACCACTGGCCACTGTAACAGTGGACGAACTCGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR TCA 72 bp CTTTTGCTACCTTTGAGGCCAGTCAGCAGCCGCTCATaGTACTTGGTGTACTCCCTGACCCAGGAGTTACAG +
Preference number: 3 (lower is better)
Translates to: LLLPLRPVSSRS*YLVYSLTQELQ
Trigger: CTGTAACTCCTGGGTCAGGGAGTACACCAAGTATCATGAGCGGCTGCTGACTGGCCTCAAAGGTAGCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR GCA 72 bp CTATTACGTTTGAAACTGCCAGCGCTTCTTTGCTTCTaGACTTGGCTTGCGGATCCGTGGCGAGTTCGTCCA +
Preference number: 3 (lower is better)
Translates to: LLRLKLPALLCF*TWLADPWRVRP
Trigger: TGGACGAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACGTAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CCA 72 bp AGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTaGGAGAGCCAAGACCATGGTGGCAGCTTGGCATCC +
Preference number: 3 (lower is better)
Translates to: RNCETYPRNTGL*ESQDHGGSLAS
Trigger: GGATGCCAAGCTGCCACCATGGTCTTGGCTCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR CCA 72 bp TCACACTCCTGGTGCATGAAGGTGAGCGGCGTGCCCTaGTTTGCAATGGTTAAGGTGAACTGGTTCTCATCT +
Preference number: 3 (lower is better)
Translates to: SHSWCMKVSGVP*FAMVKVNWFSS
Trigger: AGATGAGAACCAGTTCACCTTAACCATTGCAAACCAGGGCACGCCGCTCACCTTCATGCACCAGGAGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR CAA 90 bp GAGTCTCCTTTAAGCCCAGCTTCCTCACATGCCTGCGTGCTGAGCAGTGCTCCCACTTGGGGCAATGAATaGCCCTTTAAAGAATTTGGA +
Preference number: 3 (lower is better)
Translates to: ESPLSPASSHACVLSSAPTWGNE*PFKEFG
Trigger: TCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGT...GGGAGCACTGCTCAGCACGCAGGCATGTGAGGAAGCTGGGCTTAAAGGAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422121.2
3UTR TCA 72 bp AGCAAAAGTCTCTCTCTCATAGGAGCCAGGAGAGAATaGCCTGTCCCGGTAACTGGAACGGAAGGCAATGAC +
Preference number: 3 (lower is better)
Translates to: SKSLSLIGARRE*PVPVTGTEGND
Trigger: GTCATTGCCTTCCGTTCCAGTTACCGGGACAGGTCATTCTCTCCTGGCTCCTATGAGAGAGAGACTTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CCA 72 bp TTGGATAGGTGGCTGCAAGGTATCCTTCAGAACCTTTaGGAGAGGACCATGGCTGAGTCTCCTTTAGTGTCC +
Preference number: 3 (lower is better)
Translates to: LDRWLQGILQNL*ERTMAESPLVS
Trigger: GGACACTAAAGGAGACTCAGCCATGGTCCTCTCCCAAAGGTTCTGAAGGATACCTTGCAGCCACCTATCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR TCA 72 bp CAGTCAGCAGCCGCTCATGATACTTGGTGTACTCCCTaGCCCAGGAGTTACAGTTATAGATATAGACTGCGG +
Preference number: 3 (lower is better)
Translates to: QSAAAHDTWCTP*PRSYSYRYRLR
Trigger: CCGCAGTCTATATCTATAACTGTAACTCCTGGGTCAGGGAGTACACCAAGTATCATGAGCGGCTGCTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR GCA 72 bp AAAGCCAAGGTGGCAGCAGGTAGTTTCTGTTGTTCATaGTCTATGTGCTCAGCCAGTTTCCCAGGACAGTCT +
Preference number: 3 (lower is better)
Translates to: KAKVAAGSFCCS*SMCSASFPGQS
Trigger: AGACTGTCCTGGGAAACTGGCTGAGCACATAGAGCATGAACAACAGAAACTACCTGCTGCCACCTTGGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR GCA 72 bp TGCAGCACAGCCACAGCTACCCAAAAGAGGGCTTTGTaGAGAGGCGAGTCCTTATTAAGAAGTGGCTGTAAT +
Preference number: 3 (lower is better)
Translates to: CSTATATQKRAL*RGESLLRSGCN
Trigger: ATTACAGCCACTTCTTAATAAGGACTCGCCTCTGCACAAAGCCCTCTTTTGGGTAGCTGTGGCTGTGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR CAA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGACTGCTGCTTTACGTTaGGTGCTTTCAGCAAAACCA +
Preference number: 3 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQTAALR*VLSAKP
Trigger: TGGTTTTGCTGAAAGCACCAAACGTAAAGCAGCAGT...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR CAA 90 bp GAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTAAGAAAGTAACAACGTGGAAGTCTGTTTTAAAGCGATaGCTAGGCCCGGTATGGGTA +
Preference number: 3 (lower is better)
Translates to: EALRESGPVATKKVTTWKSVLKR*LGPVWV
Trigger: TACCCATACCGGGCCTAGCAATCGCTTTAAAACAGA...CTTCCACGTTGTTACTTTCTTAGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR CAA 90 bp TTATGCACAACAGGAAAGACTTTGGGAAACACAACACTGGCCTCTGCTAAGTATAGCCTTTTGCTACCTTaGAGGCCAGTCAGCAGCCGC +
Preference number: 3 (lower is better)
Translates to: LCTTGKTLGNTTLASAKYSLLLP*RPVSSR
Trigger: GCGGCTGCTGACTGGCCTCAAAGGTAGCAAAAGGCT...ATACTTAGCAGAGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGTGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR TCA 72 bp GAGCCACCGCGCCCGGCTGGTTCTGAATATGAAGACTaGTTTCCAAATGAAGACAGGTTTGGCAGATTACTT +
Preference number: 3 (lower is better)
Translates to: EPPRPAGSEYED*FPNEDRFGRLL
Trigger: AAGTAATCTGCCAAACCTGTCTTCATTTGGAAATCAGTCTTCATATTCAGAACCAGCCGGGCGCGGTGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
3UTR GCA 72 bp TTAATGCTATTACGTTTGAAACTGCCAGCGCTTCTTTaGTTCTGCACTTGGCTTGCGGATCCGTGGCGAGTT +
Preference number: 3 (lower is better)
Translates to: LMLLRLKLPALL*FCTWLADPWRV
Trigger: AACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACGTAATAGCATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CCA 72 bp ATAGAAGCTGACTGTTTAGGATGTGTCCTGGGCACCTaGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAG +
Preference number: 3 (lower is better)
Translates to: IEADCLGCVLGT*LSHEQVLSEWK
Trigger: CTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAGGACACATCCTAAACAGTCAGCTTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR CCA 72 bp TGGACGAGCCCTGTAATTAATTCTGCTGTACTGCCTTaGGTTTCGGGCCCCTGTTTTCTTGGATTACAAAGC +
Preference number: 3 (lower is better)
Translates to: WTSPVINSAVLP*VSGPCFLGLQS
Trigger: GCTTTGTAATCCAAGAAAACAGGGGCCCGAAACCCAAGGCAGTACAGCAGAATTAATTACAGGGCTCGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR TCA 72 bp GTCCCGGTAACTGGAACGGAAGGCAATGACAGCAGCTaGCTTGACTTTGCTAATGCCAAACAGCAAGTAAAA +
Preference number: 3 (lower is better)
Translates to: VPVTGTEGNDSS*LDFANAKQQVK
Trigger: TTTTACTTGCTGTTTGGCATTAGCAAAGTCAAGTCAGCTGCTGTCATTGCCTTCCGTTCCAGTTACCGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR TCA 72 bp AGTATGCAGGTTTTGTTCAAGAAGTGCGGTACCTGCTaGATACAAGTTGACCTCATCAAGCTGCAGCACAGC +
Preference number: 3 (lower is better)
Translates to: SMQVLFKKCGTC*IQVDLIKLQHS
Trigger: GCTGTGCTGCAGCTTGATGAGGTCAACTTGTATTCAGCAGGTACCGCACTTCTTGAACAAAACCTGCATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR TCA 72 bp CTTGTCGATTCCTGGGGAATGCTGGGAAGTTGCAAGTaGGGTCATGGAATTAGAAAGGTTAAGGTTGGCAGT +
Preference number: 3 (lower is better)
Translates to: LVDSWGMLGSCK*GHGIRKVKVGS
Trigger: ACTGCCAACCTTAACCTTTCTAATTCCATGACCTCACTTGCAACTTCCCAGCATTCCCCAGGAATCGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR GCA 72 bp GTGGCAGCAGGTAGTTTCTGTTGTTCATGCTCTATGTaGTCAGCCAGTTTCCCAGGACAGTCTATGAAAACA +
Preference number: 3 (lower is better)
Translates to: VAAGSFCCSCSM*SASFPGQSMKT
Trigger: TGTTTTCATAGACTGTCCTGGGAAACTGGCTGAGCACATAGAGCATGAACAACAGAAACTACCTGCTGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CCA 72 bp GCATTCAACGATATTCAGCTTTCCAACCCAGGACTGTaGTCTGTCTCTCCATTTGCTGGAGTCTCCTTTAAG +
Preference number: 3 (lower is better)
Translates to: AFNDIQLSNPGL*SVSPFAGVSFK
Trigger: CTTAAAGGAGACTCCAGCAAATGGAGAGACAGACCACAGTCCTGGGTTGGAAAGCTGAATATCGTTGAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
3UTR-3UTR CAA 90 bp AGTCTGGAATTTGTGTTTGCTTTGAAAACGGTCCTGCAAACCGCCACAAGCCATATTGCCCTAGGACTTTaGTTCGCTCTGCTGAAGTTA +
Preference number: 3 (lower is better)
Translates to: SLEFVFALKTVLQTATSHIALGL*FALLKL
Trigger: TAACTTCAGCAGAGCGAACAAAAGTCCTAGGGCAAT...ATGGCTTGTGGCGGTTTGCAGGACCGTTTTCAAAGCAAACACAAATTCCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR TCA 72 bp AAGGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTaGTCATCTGGCAACATGGCAAACCGGATGGGTTCA +
Preference number: 3 (lower is better)
Translates to: KAALNLGKASKS*SSGNMANRMGS
Trigger: TGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
3UTR GCA 72 bp AAATGTAAGACTCGGTGCCATTCGTATTGCTGGGTGTaGTCCACAACCTTGCACTGCTTTATGAAGTGTTTC +
Preference number: 3 (lower is better)
Translates to: KCKTRCHSYCWV*STTLHCFMKCF
Trigger: GAAACACTTCATAAAGCAGTGCAAGGTTGTGGAGCACACCCAGCAATACGAATGGCACCGAGTCTTACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR CCA 72 bp CAGAAGGCAGAGCTCTGTGCAAATGGCTTTCATCACTaGCCAGTAGTAGCAGTATTCAAGAATTCATCCTCT +
Preference number: 3 (lower is better)
Translates to: QKAELCANGFHH*PVVAVFKNSSS
Trigger: AGAGGATGAATTCTTGAATACTGCTACTACTGGCCAGTGATGAAAGCCATTTGCACAGAGCTCTGCCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR CAA 90 bp TCTTCTTGTTGGCATCTTGATCAGAATTGTATTAAGCCAGTTCATTTATTTGGGAGTGATCCGCCTGCCTaGGCCTTCCAGTGTTGGGAT +
Preference number: 3 (lower is better)
Translates to: SSCWHLDQNCIKPVHLFGSDPPA*AFQCWD
Trigger: ATCCCAACACTGGAAGGCCAAGGCAGGCGGATCACT...CCCAAATAAATGAACTGGCTTAATACAATTCTGATCAAGATGCCAACAAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
3UTR-3UTR CAA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTATCGGTGCCATTCGTATaGCTGGGTGTGCTCCACAAC +
Preference number: 3 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLSVPFV*LGVLHN
Trigger: GTTGTGGAGCACACCCAGCAATACGAATGGCACCGA...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR CAA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTATTCTGCTGTACTGCCTaGGGTTTCGGGCCCCTGTTT +
Preference number: 3 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLFCCTA*GFGPLF
Trigger: AAACAGGGGCCCGAAACCCAAGGCAGTACAGCAGAA...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR CAA 90 bp ATGATATTAATGACCAGTCCATGTGTGGAAGCTCTAAGGGAGAGCGGACCTGTGAAAAACGAACTAGATTaGACAGCCATGGAGTCATGT +
Preference number: 3 (lower is better)
Translates to: MILMTSPCVEALRESGPVKNELD*TAMESC
Trigger: ACATGACTCCATGGCTGTCAAATCTAGTTCGTTTTT...CACAGGTCCGCTCTCCCTTAGAGCTTCCACACATGGACTGGTCATTAATATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR CAA 90 bp CAGATCTGTAATCTGCCCAAGGCTTCCCCATATTTTTGCTTGAATAGATGGGTATCACCTCAGCTTTTATaGATCCCAAGCCACCTGTTG +
Preference number: 3 (lower is better)
Translates to: QICNLPKASPYFCLNRWVSPQLL*IPSHLL
Trigger: CAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTGA...TACCCATCTATTCAAGCAAAAATATGGGGAAGCCTTGGGCAGATTACAGATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR-3UTR CAA 90 bp CCATGTGTGGAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTAAGAAAGTAACAATCCTTCCAATAACCTaGCTTGAAACCAATTTCACA +
Preference number: 3 (lower is better)
Translates to: PCVEALRESGPVATKKVTILPIT*LETNFT
Trigger: TGTGAAATTGGTTTCAAGCAAGGTTATTGGAAGGAT...TGTTACTTTCTTAGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTCCACACATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR-3UTR CAA 90 bp GAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTAAGAAAGTAACAACGTGGAAGGTCTTGTCAATTATTTaGCACATCCTTCCAATAACC +
Preference number: 3 (lower is better)
Translates to: EALRESGPVATKKVTTWKVLSII*HILPIT
Trigger: GGTTATTGGAAGGATGTGCAAAATAATTGACAAGAC...CTTCCACGTTGTTACTTTCTTAGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR-3UTR CAA 90 bp GCAGTATCTGCCATCACCTCAGCTTTTATTGATCCCAAGCCACCTGTTGCACTGGTCTTGTCAATTATTTaGCACATCCTTCCAATAACC +
Preference number: 3 (lower is better)
Translates to: AVSAITSAFIDPKPPVALVLSII*HILPIT
Trigger: GGTTATTGGAAGGATGTGCAAAATAATTGACAAGAC...CAGTGCAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTGATGGCAGATACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR-3UTR CAA 90 bp TGCAGGTTTTGTTCAAGAAGTGCGGTACCTGCTGAATACAAGTTGACCTCATCAATGAAAACAAGCCTTTaGCTACCTTTGAGGCCAGTC +
Preference number: 3 (lower is better)
Translates to: CRFCSRSAVPAEYKLTSSMKTSL*LPLRPV
Trigger: GACTGGCCTCAAAGGTAGCAAAAGGCTTGTTTTCAT...TGATGAGGTCAACTTGTATTCAGCAGGTACCGCACTTCTTGAACAAAACCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CCA 72 bp TTCTTTAAATGTAAGACTCGGTGCCATTCGTATTGCTaGGTGTGCTCCACAACCTTGCACTGCTTTATGAAG +
Preference number: 3 (lower is better)
Translates to: FFKCKTRCHSYC*VCSTTLHCFMK
Trigger: CTTCATAAAGCAGTGCAAGGTTGTGGAGCACACCCAGCAATACGAATGGCACCGAGTCTTACATTTAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR CCA 72 bp TTTACCAGTGTAGCTAGAACAGTAAGAAGCAGCGCCTaGATCTTCGGATCAGTAAGTACTTCTTCATCCAAG +
Preference number: 3 (lower is better)
Translates to: FTSVARTVRSSA*IFGSVSTSSSK
Trigger: CTTGGATGAAGAAGTACTTACTGATCCGAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACTGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR-3UTR CAA 90 bp ACAAATTATGCACAACAGGAAAGACTTTGGGAAACACAACACTGGCCTCTGCTATTGCAGGTAAGATGTTaGGTATTGTGGTGGGGATTC +
Preference number: 3 (lower is better)
Translates to: TNYAQQERLWETQHWPLLLQVRC*VLWWGF
Trigger: GAATCCCCACCACAATACCAAACATCTTACCTGCAA...TAGCAGAGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGTGCATAATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR-3UTR CAA 90 bp CTGGTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACGAATTTGTGTTTGCTTaGAAAACGGTCCTGCAAACC +
Preference number: 3 (lower is better)
Translates to: LVSSSIPGRYVSIKASRNEFVFA*KTVLQT
Trigger: GGTTTGCAGGACCGTTTTCAAAGCAAACACAAATTC...GTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR TCA 72 bp CATGGTGGCAGCTTGGCATCCTTGGCACTGGGTTACTaGTCTATTTCTAAACACAGTTCTAATTTCAGCTTT +
Preference number: 3 (lower is better)
Translates to: HGGSLASLALGY*SISKHSSNFSF
Trigger: AAAGCTGAAATTAGAACTGTGTTTAGAAATAGATCAGTAACCCAGTGCCAAGGATGCCAAGCTGCCACCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR TCA 72 bp ATTGCTGGGTGTGCTCCACAACCTTGCACTGCTTTATaGAGTGTTTCACCAAACATATTTCGAAGTTCAACC +
Preference number: 3 (lower is better)
Translates to: IAGCAPQPCTAL*SVSPNIFRSST
Trigger: GGTTGAACTTCGAAATATGTTTGGTGAAACACTTCATAAAGCAGTGCAAGGTTGTGGAGCACACCCAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR GCA 72 bp TTTTTCTTTAAATGTAAGACTCGGTGCCATTCGTATTaGTGGGTGTGCTCCACAACCTTGCACTGCTTTATG +
Preference number: 3 (lower is better)
Translates to: FFFKCKTRCHSY*WVCSTTLHCFM
Trigger: CATAAAGCAGTGCAAGGTTGTGGAGCACACCCAGCAATACGAATGGCACCGAGTCTTACATTTAAAGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR CCA 72 bp AGAAAGTCTGTTTTAAAGCGATTGCTAGGCCCGGTATaGGTAAGGTCCACTACAATTTCATATGGCTTTGCA +
Preference number: 3 (lower is better)
Translates to: RKSVLKRLLGPV*VRSTTISYGFA
Trigger: TGCAAAGCCATATGAAATTGTAGTGGACCTTACCCATACCGGGCCTAGCAATCGCTTTAAAACAGACTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR CAA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCAAGGCTTCGAAGAGTaGATCATCTGGCAACATGGC +
Preference number: 3 (lower is better)
Translates to: VEFNLLKSSNETALQETPQGFEE*IIWQHG
Trigger: GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTG...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR CAA 90 bp GTATATTTTACCAGTGTAGCTAGAACAGTAAGAAGCAGCGCCTGGATCTTCGGAGTAACTCTTTGTCGTTaGGCATCATCATTATGCTTG +
Preference number: 3 (lower is better)
Translates to: VYFTSVARTVRSSAWIFGVTLCR*ASSLCL
Trigger: CAAGCATAATGATGATGCCAAACGACAAAGAGTTAC...TCCGAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACTGGTAAAATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR CAA 90 bp AATACCTTCAGGTCCTCTTCTAAAGCCAAGGTGGCAGCAGGTAGTTTCTGTTGTGTCATTGTTATCAGCTaGTCAAGAATAGCAGTAACT +
Preference number: 3 (lower is better)
Translates to: NTFRSSSKAKVAAGSFCCVIVIS*SRIAVT
Trigger: AGTTACTGCTATTCTTGACAAGCTGATAACAATGAC...ACAACAGAAACTACCTGCTGCCACCTTGGCTTTAGAAGAGGACCTGAAGGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR CAA 90 bp CTTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCATCCCTGTTGCACTGGTTTaGATGAAACTGTCTAGTACA +
Preference number: 3 (lower is better)
Translates to: LETNFTFPEAKATAVSAIPVALV*MKLSST
Trigger: TGTACTAGACAGTTTCATCAAAACCAGTGCAACAGG...GATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR-3UTR CAA 90 bp TCCAGAGGATTCCGGATTGCCATAAATACTTCCTCTGGACTCTTGTCATTGAATAACAAGAGCTCTTGGTaGCAGGGATGGATTATATTG +
Preference number: 3 (lower is better)
Translates to: SRGFRIAINTSSGLLSLNNKSSW*QGWIIL
Trigger: CAATATAATCCATCCCTGCAACCAAGAGCTCTTGTT...ATTCAATGACAAGAGTCCAGAGGAAGTATTTATGGCAATCCGGAATCCTCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR TCA 72 bp AGTGTTTCACCAAACATATTTCGAAGTTCAACCGAGTaGCAATACACAGCATCAATCTTAGGCCACCAATCC +
Preference number: 3 (lower is better)
Translates to: SVSPNIFRSSTE*QYTASILGHQS
Trigger: GGATTGGTGGCCTAAGATTGATGCTGTGTATTGTCACTCGGTTGAACTTCGAAATATGTTTGGTGAAACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR GCA 72 bp GACCAAGGATATCCAATGCAACAAATGCCCACAAATTaGCTTTGGGATAAATCAAACCAAAGGAACACAGAG +
Preference number: 3 (lower is better)
Translates to: DQGYPMQQMPTN*LWDKSNQRNTE
Trigger: CTCTGTGTTCCTTTGGTTTGATTTATCCCAAAGGCAATTTGTGGGCATTTGTTGCATTGGATATCCTTGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR CAA 90 bp CTGGATACACTCTCTTCTTGTTGGCATCTTGATCAGAATTGTATTAAGCCAGTTCAAATGAAGACAGGTTaGGCAGATTACTTGGGGCAA +
Preference number: 3 (lower is better)
Translates to: LDTLSSCWHLDQNCIKPVQMKTG*ADYLGQ
Trigger: TTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTG...AACTGGCTTAATACAATTCTGATCAAGATGCCAACAAGAAGAGAGTGTATCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422121.2
3UTR-3UTR CAA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGTCATCAACCACGTCTTaGGATATATCCTGGATTATT +
Preference number: 3 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSSSTTS*DISWII
Trigger: AATAATCCAGGATATATCCAAAGACGTGGTTGATGA...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR-3UTR CAA 90 bp CTGGTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACAATAGCAGTAACTCTTaGTCGTTTGGCATCATCATT +
Preference number: 3 (lower is better)
Translates to: LVSSSIPGRYVSIKASRNNSSNS*SFGIII
Trigger: AATGATGATGCCAAACGACAAAGAGTTACTGCTATT...GTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR CAA 90 bp CTTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCATCTCCCCATATTTTTGCTaGAATAGATGGGTACATCTG +
Preference number: 3 (lower is better)
Translates to: LETNFTFPEAKATAVSAISPYFC*NRWVHL
Trigger: CAGATGTACCCATCTATTCAAGCAAAAATATGGGGA...GATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR-3UTR CAA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTACAATTTTCAACACTTaGTTCACTGATTACCCTGCT +
Preference number: 3 (lower is better)
Translates to: KSSNETALQETPLSPRFITIFNT*FTDYPA
Trigger: AGCAGGGTAATCAGTGAACAAAGTGTTGAAAATTGT...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR-3UTR CAA 90 bp TTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCATCAGTAACTCTTTGTCGTTaGGCATCATCATTATGCTTG +
Preference number: 3 (lower is better)
Translates to: LKPISHFQKPKLQQYLPSVTLCR*ASSLCL
Trigger: CAAGCATAATGATGATGCCAAACGACAAAGAGTTAC...TGATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR-3UTR CAA 90 bp TTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCATCATCCCCATATTTTTGCTaGAATAGATGGGTACATCTG +
Preference number: 3 (lower is better)
Translates to: LKPISHFQKPKLQQYLPSSPYFC*NRWVHL
Trigger: CAGATGTACCCATCTATTCAAGCAAAAATATGGGGA...TGATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR-3UTR CAA 90 bp ACAATTCCATGGATTGGATTTAACAAATTTGGATCTTGGCACAATGATAACAGGACAACAGGAAAGACTTaGGGAAACACAACACTGGCC +
Preference number: 3 (lower is better)
Translates to: TIPWIGFNKFGSWHNDNRTTGKT*GNTTLA
Trigger: GGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGT...CCTGTTATCATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR-3UTR CAA 90 bp ACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGATCTTGGCACAATTTGCAGGTAAGATGTTaGGTATTGTGGTGGGGATTC +
Preference number: 3 (lower is better)
Translates to: TLCTIPWIGFNKFGSWHNLQVRC*VLWWGF
Trigger: GAATCCCCACCACAATACCAAACATCTTACCTGCAA...ATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR TCA 72 bp AAGTTTCCTGACCTCCCACTTTCTTTGCAGTTGTTCTaGACACTTACATATACCAGATACACGCCAAAAGTA +
Preference number: 3 (lower is better)
Translates to: KFPDLPLSLQLF*TLTYTRYTPKV
Trigger: TACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAGGAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
3UTR TCA 72 bp CAAAGGTATTTTTGCATTTCAAAGGCGGCTGAATTTTaGTTTGTGCCAATGCTGATCATTTCAGGCGGTATG +
Preference number: 3 (lower is better)
Translates to: QRYFCISKAAEF*FVPMLIISGGM
Trigger: CATACCGCCTGAAATGATCAGCATTGGCACAAATCAAAATTCAGCCGCCTTTGAAATGCAAAAATACCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR GCA 72 bp AGTTGTCATGGTGCCAATTTCACTATAGATGGTATATaGGAGAGCCTTACCTTCCTGGCAAAATTCTTTGAA +
Preference number: 3 (lower is better)
Translates to: SCHGANFTIDGI*ESLTFLAKFFE
Trigger: TTCAAAGAATTTTGCCAGGAAGGTAAGGCTCTCGCATATACCATCTATAGTGAAATTGGCACCATGACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490416.2
3UTR GCA 72 bp TATTGTGGTGGGGATTCTTCATGGTACACCACACTCTaGACAATTCCATGGATTGGATTTAACAAATTTGGA +
Preference number: 3 (lower is better)
Translates to: YCGGDSSWYTTL*TIPWIGFNKFG
Trigger: TCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCATGAAGAATCCCCACCACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR CCA 72 bp AATTACCAGTTGTCATGGTGCCAATTTCACTATAGATaGTATATGCGAGAGCCTTACCTTCCTGGCAAAATT +
Preference number: 3 (lower is better)
Translates to: NYQLSWCQFHYR*YMREPYLPGKI
Trigger: AATTTTGCCAGGAAGGTAAGGCTCTCGCATATACCATCTATAGTGAAATTGGCACCATGACAACTGGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490416.2
3UTR CCA 72 bp TCGTTTGCTAATACACCCAAAGACAACAAGAGCTCTTaGTTGCAGGGATGGATTATATTGGAATGCAAATCT +
Preference number: 3 (lower is better)
Translates to: SFANTPKDNKSS*LQGWIILECKS
Trigger: AGATTTGCATTCCAATATAATCCATCCCTGCAACCAAGAGCTCTTGTTGTCTTTGGGTGTATTAGCAAACGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR-3UTR CAA 90 bp TTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCATCAGTCATTGTTATCAGCTaGTCAAGAATAGCAGTAACT +
Preference number: 3 (lower is better)
Translates to: LKPISHFQKPKLQQYLPSVIVIS*SRIAVT
Trigger: AGTTACTGCTATTCTTGACAAGCTGATAACAATGAC...TGATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR CCA 72 bp ATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTaGCAACATGGCAAACCGGATGGGTTCATTATAAAA +
Preference number: 3 (lower is better)
Translates to: IKFRQGFEELII*QHGKPDGFIIK
Trigger: TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
3UTR CCA 72 bp AATTGTATTAAGCCAGTTCATTTATTTGGGAAGATCTaGCATTCAACGATATTCAGCTTTCCAACCCAGGAC +
Preference number: 3 (lower is better)
Translates to: NCIKPVHLFGKI*HSTIFSFPTQD
Trigger: GTCCTGGGTTGGAAAGCTGAATATCGTTGAATGCCAGATCTTCCCAAATAAATGAACTGGCTTAATACAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
3UTR-3UTR CAA 90 bp TCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACTTAACAATAAATGATAACAGGGTGTaGATCTTAGAGTCCAACAAA +
Preference number: 3 (lower is better)
Translates to: SSIPGRYVSIKASRNLTINDNRV*ILESNK
Trigger: TTTGTTGGACTCTAAGATCAACACCCTGTTATCATT...TATTGTTAAGTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR TCA 72 bp TTACCTTCTGGGAACAATTTTCAACACTTTGTTCACTaGTTACCCTGCTCAGAATTAGTTAGGAAAGAAGAG +
Preference number: 3 (lower is better)
Translates to: LPSGNNFQHFVH*LPCSELVRKEE
Trigger: CTCTTCTTTCCTAACTAATTCTGAGCAGGGTAATCAGTGAACAAAGTGTTGAAAATTGTTCCCAGAAGGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR TCA 72 bp ATGTTGAGACCCAATCATGTCTACTATTTCTGGCTATaGATCACAGAAAAACTCTCTCCAAGTGAATTTGAG +
Preference number: 3 (lower is better)
Translates to: MLRPNHVYYFWL*ITEKLSPSEFE
Trigger: CTCAAATTCACTTGGAGAGAGTTTTTCTGTGATTCATAGCCAGAAATAGTAGACATGATTGGGTCTCAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR GCA 72 bp TTCTCAGTTAAAAGTTTCCTGACCTCCCACTTTCTTTaGAGTTGTTCTGAACACTTACATATACCAGATACA +
Preference number: 3 (lower is better)
Translates to: FSVKSFLTSHFL*SCSEHLHIPDT
Trigger: TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAGGAAACTTTTAACTGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR CCA 72 bp ACAATTCCATGGATTGGATTTAACAAATTTGGATCTTaGCACAATGATAACAGGGTGTTGATCTTAGAGTCC +
Preference number: 3 (lower is better)
Translates to: TIPWIGFNKFGS*HNDNRVLILES
Trigger: GGACTCTAAGATCAACACCCTGTTATCATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR TCA 72 bp TTCTTTACATCTTACTCTACAATCATTTGGATTATATaGACAAAGACAGGGCTCAGCCTGATAAGTCACTGT +
Preference number: 3 (lower is better)
Translates to: FFTSYSTIIWII*TKTGLSLISHC
Trigger: ACAGTGACTTATCAGGCTGAGCCCTGTCTTTGTTCATATAATCCAAATGATTGTAGAGTAAGATGTAAAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR CCA 72 bp CATATACTTCTAACAATTAAGAAACACTGTCATCTCTaGGAAAAGAAACCACTCACATTACCTTCAAACAAG +
Preference number: 3 (lower is better)
Translates to: HILLTIKKHCHL*EKKPLTLPSNK
Trigger: CTTGTTTGAAGGTAATGTGAGTGGTTTCTTTTCCCAGAGATGACAGTGTTTCTTAATTGTTAGAAGTATATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp GTCTCCTTTAAGCCCAGCTTCCTCACATGCCTGCGTGCTGAGCAGTGCTCCCAGCCCAGCTTCCTCACATaGCTGCGTGCTGAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: VSFKPSFLTCLRAEQCSQPSFLT*LRAEQC
Trigger: GCACTGCTCAGCACGCAGGCATGTGAGGAAGCTGGG...CTGGGAGCACTGCTCAGCACGCAGGCATGTGAGGAAGCTGGGCTTAAAGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
CDS-3UTR CCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGCGGCTGACCACGGCCTaGACCCATTCCACCGGCCTG +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELRLTTA*THSTGL
Trigger: CAGGCCGGTGGAATGGGTCCAGGCCGTGGTCAGCCG...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCGCGGGGAGCGGAGGCTaGGGTGAGGGAAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGAGSGG*GEGRGK
Trigger: CTTGCCTCTTCCCTCACCTCAGCCTCCGCTCCCCGC...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGGGGCAACTAAGGGCATaGCCCTCGGATGGGAGTACT +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELGQLRA*PSDGST
Trigger: AGTACTCCCATCCGAGGGGCATGCCCTTAGTTGCCC...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGCAAACCTGGGAGGGTTaGTGGCTGGCACTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELQTWEG*WLALCL
Trigger: GAGACAGAGTGCCAGCCAGCAACCCTCCCAGGTTTG...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR CAA 72 bp TGGATTTCCTGGCTCGGGGACTGGTCTGGCCGACAGTaGGATAGGTGGCTGCAAGGTATCCTTCAGAACCTT +
Preference number: 4 (lower is better)
Translates to: WISWLGDWSGRQ*DRWLQGILQNL
Trigger: AAGGTTCTGAAGGATACCTTGCAGCCACCTATCCAACTGTCGGCCAGACCAGTCCCCGAGCCAGGAAATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp AAACGGTCCTGCAAACCGCCACAAGCCATTAAAACCAAAACTTTGCAGGTAAGAGCGGGGAGCGGAGGCTaGGGTGAGGGAAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: KRSCKPPQAIKTKTLQVRAGSGG*GEGRGK
Trigger: CTTGCCTCTTCCCTCACCTCAGCCTCCGCTCCCCGC...TCTTACCTGCAAAGTTTTGGTTTTAATGGCTTGTGGCGGTTTGCAGGACCGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGGGTCTGGCCGACAGTTaGATAGGTGGCTGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELGLADS*IGGCKV
Trigger: TACCTTGCAGCCACCTATCCAACTGTCGGCCAGACC...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp GTCTATGAAAACAAGCCTTTTGCTACCTTTGAGGCCAGTCAGCAGCCGCTCATGTCCTGGCTCGGGGACTaGTCTGGCCGACAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: VYENKPFATFEASQQPLMSWLGD*SGRQLD
Trigger: ATCCAACTGTCGGCCAGACCAGTCCCCGAGCCAGGA...CATGAGCGGCTGCTGACTGGCCTCAAAGGTAGCAAAAGGCTTGTTTTCATAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGAGGCTCATGGATTTCCTaGCTCGGGGACTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRGSWIS*LGDWSG
Trigger: GCCAGACCAGTCCCCGAGCCAGGAAATCCATGAGCC...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp AGCTACCCAAAAGAGGGCTTTGTGCAGAGGCGAGTCCTTATTAAGAAGTGGCTGGGCTCATGGATTTCCTaGCTCGGGGACTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SYPKEGFVQRRVLIKKWLGSWIS*LGDWSG
Trigger: GCCAGACCAGTCCCCGAGCCAGGAAATCCATGAGCC...CAGCCACTTCTTAATAAGGACTCGCCTCTGCACAAAGCCCTCTTTTGGGTAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGTGGCTTGCGGATCCGTaGCGAGTTCGTCCACTGTTA +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELWLADP*RVRPLL
Trigger: TAACAGTGGACGAACTCGCCACGGATCCGCAAGCCA...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR CAA 72 bp ACGTTTGAAACTGCCAGCGCTTCTTTGCTTCTGCACTaGGCTTGCGGATCCGTGGCGAGTTCGTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: TFETASASLLLH*ACGSVASSSTV
Trigger: AACAGTGGACGAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGCGGGGAGCGGAGGCTaGGGTGAGGGAAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEAGSGG*GEGRGK
Trigger: CTTGCCTCTTCCCTCACCTCAGCCTCCGCTCCCCGC...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp ACCAGTCCATGTGTGGAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTAAGAAAGTCAGCAGCCGCTCATaGTACTTGGTGTACTCCCTG +
Preference number: 4 (lower is better)
Translates to: TSPCVEALRESGPVATKKVSSRS*YLVYSL
Trigger: CAGGGAGTACACCAAGTATCATGAGCGGCTGCTGAC...TTTCTTAGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTCCACACATGGACTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCTCCGAGACGCCGCCATaGCACCCCACCGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRSETPP*HPTGSG
Trigger: CCCACTTCCGGTGGGGTGTCATGGCGGCGTCTCGGA...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356175.7
CDS-3UTR GCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGAAGAGGGTCTGTGGAGTaGAGGCTCCCAGTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRRGSVE*RLPVFP
Trigger: TGGGAACACTGGGAGCCTGCACTCCACAGACCCTCT...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTCATTCCACCGGCCTGTaGGCGGCCATGTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSHSTGL*AAMSSP
Trigger: CGGGGAGGACATGGCCGCGCACAGGCCGGTGGAATG...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGCGGTGCCATTCGTATTaGTGGGTGTGCTCCACAACC +
Preference number: 4 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQRCHSY*WVCSTT
Trigger: GGTTGTGGAGCACACCCAGCAATACGAATGGCACCG...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp GCAGTATCTGCCATCACCTCAGCTTTTATTGATCCCAAGCCACCTGTTGCACTGGCAAGGACCGTACAGTaGCTCAGTGATGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: AVSAITSAFIDPKPPVALARTVQ*LSDASL
Trigger: GAGGCTGGCATCACTGAGGCACTGTACGGTCCTTGC...CAGTGCAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTGATGGCAGATACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp TTAATGACCAGTCCATGTGTGGAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTGCAGTGATACTAAGCTaGCTCTGCAGTGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LMTSPCVEALRESGPVATAVILS*LCSAGG
Trigger: CCCTCCTGCACTGCAGAGCCAGCTTAGTATCACTGC...AGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTCCACACATGGACTGGTCATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CAA 72 bp AGCTGCAGCACAGCCACAGCTACCCAAAAGAGGGCTTaGTGCAGAGGCGAGTCCTTATTAAGAAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SCSTATATQKRA*CRGESLLRSGC
Trigger: ACAGCCACTTCTTAATAAGGACTCGCCTCTGCACAAAGCCCTCTTTTGGGTAGCTGTGGCTGTGCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAGCGGGGAGCGGAGGCTaGGGTGAGGGAAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQAGSGG*GEGRGK
Trigger: CTTGCCTCTTCCCTCACCTCAGCCTCCGCTCCCCGC...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR TCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGCTCGTCGAAGCGGCTaGCCACGGCCTGGACCCATT +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEARRSG*PRPGPI
Trigger: AATGGGTCCAGGCCGTGGTCAGCCGCTTCGACGAGC...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGATAGAGTCGGGCTGTaGCAGTTCCCAGCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDDRVGL*QFPAGP
Trigger: CGGACCCGCTGGGAACTGTCACAGCCCGACTCTATC...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGTTGCCCCAAATCTACTaGACTGCATCTCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELLPQIY*TASPSG
Trigger: CCCAGATGGAGATGCAGTTCAGTAGATTTGGGGCAA...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATCCGAGACGCCGCCATaGCACCCCACCGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQSETPP*HPTGSG
Trigger: CCCACTTCCGGTGGGGTGTCATGGCGGCGTCTCGGA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR GCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTACATTCCACCGGCCTGTaGGCGGCCATGTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLHSTGL*AAMSSP
Trigger: CGGGGAGGACATGGCCGCGCACAGGCCGGTGGAATG...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGTTAATTCTGCTGTACTaGCTTGGGTTTCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELLILLY*LGFRAP
Trigger: AGGGGCCCGAAACCCAAGGCAGTACAGCAGAATTAA...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp AGCTACCCAAAAGAGGGCTTTGTGCAGAGGCGAGTCCTTATTAAGAAGTGGCTGGCGCTTCTTTGCTTCTaGACTTGGCTTGCGGATCCG +
Preference number: 4 (lower is better)
Translates to: SYPKEGFVQRRVLIKKWLALLCF*TWLADP
Trigger: CGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGC...CAGCCACTTCTTAATAAGGACTCGCCTCTGCACAAAGCCCTCTTTTGGGTAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGAGTGAGCGGCGTGCCCTaGTTTGCAATGGTTAAGGTG +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRVSGVP*FAMVKV
Trigger: CACCTTAACCATTGCAAACCAGGGCACGCCGCTCAC...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp CCATGTGTGGAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTAAGAAAGTAACAATGGCTTCACACTCCTaGTGCATGAAGGTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: PCVEALRESGPVATKKVTMASHS*CMKVSG
Trigger: GCCGCTCACCTTCATGCACCAGGAGTGTGAAGCCAT...TGTTACTTTCTTAGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTCCACACATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCGGCTCATGGATTTCCTaGCTCGGGGACTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGGSWIS*LGDWSG
Trigger: GCCAGACCAGTCCCCGAGCCAGGAAATCCATGAGCC...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCTCTGGCATGTGTGACTaGGGGACCAGTTGGACGAGC +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGSGMCD*GTSWTS
Trigger: GCTCGTCCAACTGGTCCCTCAGTCACACATGCCAGA...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGATAGGGAGTTCTCCTTaGTCACCCATCATTGTGACC +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELIGSSP*SPIIVT
Trigger: GGTCACAATGATGGGTGATCAAGGAGAACTCCCTAT...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGGCTAGTTCATCCCACTaGGAACAAGGAACCACATTG +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELASSSH*EQGTTL
Trigger: CAATGTGGTTCCTTGTTCTCAGTGGGATGAACTAGC...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGACTTGGTGTACTCCCTaGCCCAGGAGTTACAGTTAT +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELTWCTP*PRSYSY
Trigger: ATAACTGTAACTCCTGGGTCAGGGAGTACACCAAGT...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCGGAGCCAGGAGAGAATaGCCTGTCCCGGTAACTGGA +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGGARRE*PVPVTG
Trigger: TCCAGTTACCGGGACAGGTCATTCTCTCCTGGCTCC...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGATTCTTAGTGTTGGCCTaGGAAGGTTGCCCCATGTCC +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRFLVLA*EGCPMS
Trigger: GGACATGGGGCAACCTTCTCAGGCCAACACTAAGAA...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGAAGGCTTCGAAGAGTTaGTCATCTGGCAACATGGCA +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELKASKS*SSGNMA
Trigger: TGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTT...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GCAGTATCTGCCATCACCTCAGCTTTTATTGATCCCAAGCCACCTGTTGCACTGTCGTATTGCTGGGTGTaGTCCACAACCTTGCACTGC +
Preference number: 4 (lower is better)
Translates to: AVSAITSAFIDPKPPVALSYCWV*STTLHC
Trigger: GCAGTGCAAGGTTGTGGAGCACACCCAGCAATACGA...CAGTGCAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTGATGGCAGATACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp ATGATATTAATGACCAGTCCATGTGTGGAAGCTCTAAGGGAGAGCGGACCTGTGCGGTGCCATTCGTATTaGTGGGTGTGCTCCACAACC +
Preference number: 4 (lower is better)
Translates to: MILMTSPCVEALRESGPVRCHSY*WVCSTT
Trigger: GGTTGTGGAGCACACCCAGCAATACGAATGGCACCG...CACAGGTCCGCTCTCCCTTAGAGCTTCCACACATGGACTGGTCATTAATATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGTTAATTCTGCTGTACTaGCTTGGGTTTCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQLILLY*LGFRAP
Trigger: AGGGGCCCGAAACCCAAGGCAGTACAGCAGAATTAA...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGATTGACCTCATCAAGCTaGAGCACAGCCACAGCTACC +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRLTSSS*STATAT
Trigger: GGTAGCTGTGGCTGTGCTGCAGCTTGATGAGGTCAA...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCCAAGGAGAGGGTCTGTaGAGTGCAGGCTCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGQGEGL*SAGSQC
Trigger: ACACTGGGAGCCTGCACTCCACAGACCCTCTCCTTG...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATTCCTGGCTCGGGGACTaGTCTGGCCGACAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDSWLGD*SGRQLD
Trigger: ATCCAACTGTCGGCCAGACCAGTCCCCGAGCCAGGA...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTACACCCCACCGGAAGTaGGATCCTTTCCACGGCCCG +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSTPHRK*DPFHGP
Trigger: CGGGCCGTGGAAAGGATCCCACTTCCGGTGGGGTGT...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356175.7
CDS-3UTR TCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGATAGGGAGTTCTCCTTaGTCACCCATCATTGTGACC +
Preference number: 4 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQIGSSP*SPIIVT
Trigger: GGTCACAATGATGGGTGATCAAGGAGAACTCCCTAT...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp AGTTCTGTCCACTGGTCCAGCCACTTGCACGTTGGAATATCTCTCATGCATGCCGCTAGTTCATCCCACTaGGAACAAGGAACCACATTG +
Preference number: 4 (lower is better)
Translates to: SSVHWSSHLHVGISLMHAASSSH*EQGTTL
Trigger: CAATGTGGTTCCTTGTTCTCAGTGGGATGAACTAGC...GGCATGCATGAGAGATATTCCAACGTGCAAGTGGCTGGACCAGTGGACAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp TCGTCCACTGTTACAGTGGCCAGTGGTAGGGGAGAGTTCAACGTTCTCCTTGTCTTTTGTTCGCTCTGCTaGAGTTACTTGGACAGCAGT +
Preference number: 4 (lower is better)
Translates to: SSTVTVASGRGEFNVLLVFCSLC*SYLDSS
Trigger: ACTGCTGTCCAAGTAACTTCAGCAGAGCGAACAAAA...GACAAGGAGAACGTTGAACTCTCCCCTACCACTGGCCACTGTAACAGTGGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp TTAATGACCAGTCCATGTGTGGAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTCCAAAAATTCTAACGTaGGGTGTGGCTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: LMTSPCVEALRESGPVATPKILT*GVAHWL
Trigger: CAGCCAATGAGCCACACCTCACGTTAGAATTTTTGG...AGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTCCACACATGGACTGGTCATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR TCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGAGGCAATGACAGCAGCTaGCTTGACTTTGCTAATGCC +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRGNDSS*LDFANA
Trigger: GGCATTAGCAAAGTCAAGTCAGCTGCTGTCATTGCC...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGAACCCACTTGCTCTCTaGAACCAGTTACTACTAGGC +
Preference number: 4 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQNPLAL*NQLLLG
Trigger: GCCTAGTAGTAACTGGTTTCAGAGAGCAAGTGGGTT...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp AGTCTGGAATTTGTGTTTGCTTTGAAAACGGTCCTGCAAACCGCCACAAGCCATCAGAGGCGAGTCCTTTaGGCTAGTTCTGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: SLEFVFALKTVLQTATSHQRRVL*ASSVHW
Trigger: CCAGTGGACAGAACTAGCTCAAAGGACTCGCCTCTG...ATGGCTTGTGGCGGTTTGCAGGACCGTTTTCAAAGCAAACACAAATTCCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581790.5
CDS-3UTR GCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGCAAGGACCGTACAGTaGCTCAGTGATGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDARTVQ*LSDASL
Trigger: GAGGCTGGCATCACTGAGGCACTGTACGGTCCTTGC...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCGCAAGGACCGTACAGTaGCTCAGTGATGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAARTVQ*LSDASL
Trigger: GAGGCTGGCATCACTGAGGCACTGTACGGTCCTTGC...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGGTAGGGAAGATGAGCTaGCACATCAAGGGAATTGTT +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELVGKMS*HIKGIV
Trigger: AACAATTCCCTTGATGTGGCAGCTCATCTTCCCTAC...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp TCGTCCACTGTTACAGTGGCCAGTGGTAGGGGAGAGTTCAACGTTCTCCTTGTCGTAGGGAAGATGAGCTaGCACATCAAGGGAATTGTT +
Preference number: 4 (lower is better)
Translates to: SSTVTVASGRGEFNVLLVVGKMS*HIKGIV
Trigger: AACAATTCCCTTGATGTGGCAGCTCATCTTCCCTAC...GACAAGGAGAACGTTGAACTCTCCCCTACCACTGGCCACTGTAACAGTGGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp CAGAACCTTTGGGAGAGGACCATGGCTGAGTCTCCTTTAGTGTCCTATAGGAAGTCGATTCCTGGGGAATaGTGGGAAGTTGCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: QNLWERTMAESPLVSYRKSIPGE*WEVASE
Trigger: CTCACTTGCAACTTCCCAGCATTCCCCAGGAATCGA...CTTCCTATAGGACACTAAAGGAGACTCAGCCATGGTCCTCTCCCAAAGGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCCTGCCAGCGCTTCTTTaGTTCTGCACTTGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGLPALL*FCTWLA
Trigger: CGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAG...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGCAACTAAGGGCATaGCCCTCGGATGGGAGTACT +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDGQLRA*PSDGST
Trigger: AGTACTCCCATCCGAGGGGCATGCCCTTAGTTGCCC...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATCAAGGAGAGGGTCTGTaGAGTGCAGGCTCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDQGEGL*SAGSQC
Trigger: ACACTGGGAGCCTGCACTCCACAGACCCTCTCCTTG...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGAAGTTCAGCTGCATGCTaGTTTCCTTCACGACAGGTG +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRSSAAC*FPSRQV
Trigger: CACCTGTCGTGAAGGAAACCAGCATGCAGCTGAACT...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGGGGCCCCTGTTTTCTTaGATTACAAAGCAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELGPLFS*ITKQEL
Trigger: AAGCTCTTGCTTTGTAATCCAAGAAAACAGGGGCCC...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAATCCTGGCTCGGGGACTaGTCTGGCCGACAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQESWLGD*SGRQLD
Trigger: ATCCAACTGTCGGCCAGACCAGTCCCCGAGCCAGGA...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCCCATGTCCAGGCTCATaGATTTCCTGGCTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAPCPGS*ISWLGD
Trigger: GTCCCCGAGCCAGGAAATCCATGAGCCTGGACATGG...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGCAACAGGAAAGACTTTaGGAAACACAACACTGGCCT +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELQQERL*ETQHWP
Trigger: AGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTG...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGAGGTGGGGATTCTTCATaGTACACCACACTCTGCACA +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRGGDSS*YTTLCT
Trigger: TGTGCAGAGTGTGGTGTACCATGAAGAATCCCCACC...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCGCAGTGATACTAAGCTaGCTCTGCAGTGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGAVILS*LCSAGG
Trigger: CCCTCCTGCACTGCAGAGCCAGCTTAGTATCACTGC...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGAGCAGCTTGGCATCCTTaGCACTGGGTTACTGATCTA +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRAAWHP*HWVTDL
Trigger: TAGATCAGTAACCCAGTGCCAAGGATGCCAAGCTGC...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAACACCCCACCGGAAGTaGGATCCTTTCCACGGCCCG +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQTPHRK*DPFHGP
Trigger: CGGGCCGTGGAAAGGATCCCACTTCCGGTGGGGTGT...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487476.5
3UTR CAA 72 bp CTTAATGCTATTACGTTTGAAACTGCCAGCGCTTCTTaGCTTCTGCACTTGGCTTGCGGATCCGTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: LNAITFETASAS*LLHLACGSVAS
Trigger: ACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACGTAATAGCATTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp GTGGCGAGTTCGTCCACTGTTACAGTGGCCAGTGGTAGGGGAGAGTTCAACGTTCCTTGCACTGCTTTATaGAGTGTTTCACCAAACATA +
Preference number: 4 (lower is better)
Translates to: VASSSTVTVASGRGEFNVPCTAL*SVSPNI
Trigger: TATGTTTGGTGAAACACTTCATAAAGCAGTGCAAGG...AACGTTGAACTCTCCCCTACCACTGGCCACTGTAACAGTGGACGAACTCGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCGCACCGATGCTGTTCTaGGGGAAACGCTGGCTAACC +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRAPMLF*GKRWLT
Trigger: GGTTAGCCAGCGTTTCCCTCAGAACAGCATCGGTGC...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp AGTTCTGTCCACTGGTCCAGCCACTTGCACGTTGGAATATCTCTCATGCATGCCCTTCCAACAGCTTTATaGTCCCTGTTGCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: SSVHWSSHLHVGISLMHALPTAL*SLLLER
Trigger: TCTTTCCAGCAACAGGGATCATAAAGCTGTTGGAAG...GGCATGCATGAGAGATATTCCAACGTGCAAGTGGCTGGACCAGTGGACAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCGTCAGCAGCCGCTCATaGTACTTGGTGTACTCCCTG +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAVSSRS*YLVYSL
Trigger: CAGGGAGTACACCAAGTATCATGAGCGGCTGCTGAC...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp ACAAATTATGCACAACAGGAAAGACTTTGGGAAACACAACACTGGCCTCTGCTAGCCTTTTGCTACCTTTaGGGCCAGTCAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: TNYAQQERLWETQHWPLLAFCYL*GQSAAA
Trigger: AGCGGCTGCTGACTGGCCTCAAAGGTAGCAAAAGGC...TAGCAGAGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGTGCATAATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp GAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTAAGAAAGTAACAACGTGGAAGCTGCTGAATACAAGTTaGCCTCATCAAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: EALRESGPVATKKVTTWKLLNTS*PHQAAA
Trigger: TGCTGCAGCTTGATGAGGTCAACTTGTATTCAGCAG...CTTCCACGTTGTTACTTTCTTAGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp GAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTAAGAAAGTAACAACGTGGAAGAAGTGCGGTACCTGCTaGATACAAGTTGACCTCATC +
Preference number: 4 (lower is better)
Translates to: EALRESGPVATKKVTTWKKCGTC*IQVDLI
Trigger: GATGAGGTCAACTTGTATTCAGCAGGTACCGCACTT...CTTCCACGTTGTTACTTTCTTAGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp GTGGAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTAAGAAAGTAACAACGTGGCTGGGAAGTTGCAAGTaGGGTCATGGAATTAGAAAG +
Preference number: 4 (lower is better)
Translates to: VEALRESGPVATKKVTTWLGSCK*GHGIRK
Trigger: CTTTCTAATTCCATGACCTCACTTGCAACTTCCCAG...CCACGTTGTTACTTTCTTAGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGCAGTTAAAAGTTTCCTaGCCTCCCACTTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELQLKVS*PPTFFA
Trigger: TGCAAAGAAAGTGGGAGGTCAGGAAACTTTTAACTG...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp AATATGAAGACTGATTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAACACATGCCTGCGTGCTaGGCAGTGCTCCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: NMKTDFQMKTGLADYLGQHMPAC*AVLPGC
Trigger: ACAGCCTGGGAGCACTGCTCAGCACGCAGGCATGTG...TTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAATCAGTCTTCATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422121.2
CDS-3UTR GCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGATTGTGTCCTTTGGTTaGCCAGCAAGACATTTTTCC +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELIVSFG*PARHFS
Trigger: GGAAAAATGTCTTGCTGGGCAACCAAAGGACACAAT...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GTCTATGAAAACAAGCCTTTTGCTACCTTTGAGGCCAGTCAGCAGCCGCTCATGATTCCGAAGTTCAGCTaGATGCTGGTTTCCTTCACG +
Preference number: 4 (lower is better)
Translates to: VYENKPFATFEASQQPLMIPKFS*MLVSFT
Trigger: CGTGAAGGAAACCAGCATGCAGCTGAACTTCGGAAT...CATGAGCGGCTGCTGACTGGCCTCAAAGGTAGCAAAAGGCTTGTTTTCATAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCTCGTATTGCTGGGTGTaGTCCACAACCTTGCACTGC +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGSYCWV*STTLHC
Trigger: GCAGTGCAAGGTTGTGGAGCACACCCAGCAATACGA...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp AGTGTAGCTAGAACAGTAAGAAGCAGCGCCTGGATCTTCGGATCAGTAAGTACTCAGCAGAGCCTCCATTaGTTCCTGAGCAATCTCTGG +
Preference number: 4 (lower is better)
Translates to: SVARTVRSSAWIFGSVSTQQSLH*FLSNLW
Trigger: CCAGAGATTGCTCAGGAAGCAATGGAGGCTCTGCTG...AGTACTTACTGATCCGAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp ACTGGTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAAGCTTCACACTCCTGGTaGATGAAGGTGAGCGGCGTG +
Preference number: 4 (lower is better)
Translates to: TGFFINSRQVRVNQGIKKASHSW*MKVSGV
Trigger: CACGCCGCTCACCTTCATGCACCAGGAGTGTGAAGC...TTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp TTAATGACCAGTCCATGTGTGGAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTGTGTGGCTCATTGGCTaGCAGTGTCTTACTAATAGA +
Preference number: 4 (lower is better)
Translates to: LMTSPCVEALRESGPVATVWLIG*QCLTNR
Trigger: TCTATTAGTAAGACACTGGCAGCCAATGAGCCACAC...AGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTCCACACATGGACTGGTCATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR GCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGAGCTACAGCAGTATCTaGCATCACCTCAGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELSYSSI*HHLSFY
Trigger: ATAAAAGCTGAGGTGATGGCAGATACTGCTGTAGCT...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp AGTTCTGTCCACTGGTCCAGCCACTTGCACGTTGGAATATCTCTCATGCATGCCCAAAAGAGGGCTTTGTaGAGAGGCGAGTCCTTATTA +
Preference number: 4 (lower is better)
Translates to: SSVHWSSHLHVGISLMHAQKRAL*RGESLL
Trigger: TAATAAGGACTCGCCTCTGCACAAAGCCCTCTTTTG...GGCATGCATGAGAGATATTCCAACGTGCAAGTGGCTGGACCAGTGGACAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGCGCTTCTTTGCTTCTaGACTTGGCTTGCGGATCCG +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDALLCF*TWLADP
Trigger: CGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGC...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp GTGGTATATTTTACCAGTGTAGCTAGAACAGTAAGAAGCAGCGCCTGGATCTTCCTGCCAGCGCTTCTTTaGTTCTGCACTTGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: VVYFTSVARTVRSSAWIFLPALL*FCTWLA
Trigger: CGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAG...GAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACTGGTAAAATATACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGAATCAAAGGCTTACACTaGCTGCTATTCCAGGGCCTA +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRIKGLH*LLFQGL
Trigger: TAGGCCCTGGAATAGCAGGCAGTGTAAGCCTTTGAT...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGACGGCTGACCACGGCCTaGACCCATTCCACCGGCCTG +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRRLTTA*THSTGL
Trigger: CAGGCCGGTGGAATGGGTCCAGGCCGTGGTCAGCCG...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp GATCCCAAGCCACCTGTTGCACTGGTTTTGATGAAACTGTCTAGTACAACATCAGTGAGCGGCGTGCCCTaGTTTGCAATGGTTAAGGTG +
Preference number: 4 (lower is better)
Translates to: DPKPPVALVLMKLSSTTSVSGVP*FAMVKV
Trigger: CACCTTAACCATTGCAAACCAGGGCACGCCGCTCAC...TGATGTTGTACTAGACAGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATATGGCTTCACACTCCTaGTGCATGAAGGTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDMASHS*CMKVSG
Trigger: GCCGCTCACCTTCATGCACCAGGAGTGTGAAGCCAT...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCGGTCTGGCCGACAGTTaGATAGGTGGCTGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAGLADS*IGGCKV
Trigger: TACCTTGCAGCCACCTATCCAACTGTCGGCCAGACC...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAATCCTGGCTCGGGGACTaGTCTGGCCGACAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKSWLGD*SGRQLD
Trigger: ATCCAACTGTCGGCCAGACCAGTCCCCGAGCCAGGA...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAGGCTCATGGATTTCCTaGCTCGGGGACTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLGSWIS*LGDWSG
Trigger: GCCAGACCAGTCCCCGAGCCAGGAAATCCATGAGCC...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp CAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCCCATGTCCAGGCTCATaGATTTCCTGGCTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: QVWQITWGNELPFKEFGCPCPGS*ISWLGD
Trigger: GTCCCCGAGCCAGGAAATCCATGAGCCTGGACATGG...GCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp TTATGCACAACAGGAAAGACTTTGGGAAACACAACACTGGCCTCTGCTAAGTATCCATGTCCAGGCTCATaGATTTCCTGGCTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: LCTTGKTLGNTTLASAKYPCPGS*ISWLGD
Trigger: GTCCCCGAGCCAGGAAATCCATGAGCCTGGACATGG...ATACTTAGCAGAGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGTGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCCTCCTTGTCGATTCCTaGGGAATGCTGGGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGLLVDS*GMLGSC
Trigger: GCAACTTCCCAGCATTCCCCAGGAATCGACAAGGAG...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATTGGCTTGCGGATCCGTaGCGAGTTCGTCCACTGTTA +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDWLADP*RVRPLL
Trigger: TAACAGTGGACGAACTCGCCACGGATCCGCAAGCCA...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGAATGGCTTTCATCACTaGCCAGTAGTAGCAGTATTC +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELNGFHH*PVVAVF
Trigger: GAATACTGCTACTACTGGCCAGTGATGAAAGCCATT...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCGGAGAGCCAAGACCATaGTGGCAGCTTGGCATCCTT +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAGEPRP*WQLGIL
Trigger: AAGGATGCCAAGCTGCCACCATGGTCTTGGCTCTCC...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATTGTGTCCTGGGCACCTaGCTCAGTCATGAACAGGTG +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDCVLGT*LSHEQV
Trigger: CACCTGTTCATGACTGAGCCAGGTGCCCAGGACACA...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTAGGGAGGGTTGCTGGCTaGCACTCTGTCTCCCCAACT +
Preference number: 4 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLGRVAG*HSVSPT
Trigger: AGTTGGGGAGACAGAGTGCCAGCCAGCAACCCTCCC...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ACCCAGGACTGTGGTCTGTCTCTCCATTTGCTGGAGTCTCCTTTAAGCCCAGCTAGGCATAAGCCACCATaGCCGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: TQDCGLSLHLLESPLSPARHKPP*PANFCI
Trigger: AATACAAAAATTAGCCGGCCATGGTGGCTTATGCCT...AGCTGGGCTTAAAGGAGACTCCAGCAAATGGAGAGACAGACCACAGTCCTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422121.2
CDS-3UTR CCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGCTGGTCTTTAACTCTTaGGCTCAAGAGATACTCCCA +
Preference number: 4 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQLVFNS*AQEILP
Trigger: TGGGAGTATCTCTTGAGCCCAAGAGTTAAAGACCAG...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATCTGGCATGTGTGACTaGGGGACCAGTTGGACGAGC +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQSGMCD*GTSWTS
Trigger: GCTCGTCCAACTGGTCCCTCAGTCACACATGCCAGA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR TCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGGCCTCCATTGCTTCCTaGGCAATCTCTGGCATGTGT +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSASIAS*AISGMC
Trigger: ACACATGCCAGAGATTGCTCAGGAAGCAATGGAGGC...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGATGCTGCTCTTCCTGTTaGCATCATATTGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRCCSSC*HHIADR
Trigger: TCTGTCAGCAATATGATGTCAACAGGAAGAGCAGCA...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp GTCTATGAAAACAAGCCTTTTGCTACCTTTGAGGCCAGTCAGCAGCCGCTCATGTGCTGCTCTTCCTGTTaGCATCATATTGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: VYENKPFATFEASQQPLMCCSSC*HHIADR
Trigger: TCTGTCAGCAATATGATGTCAACAGGAAGAGCAGCA...CATGAGCGGCTGCTGACTGGCCTCAAAGGTAGCAAAAGGCTTGTTTTCATAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTAGCCTTTTGCTACCTTTaGGGCCAGTCAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLAFCYL*GQSAAA
Trigger: AGCGGCTGCTGACTGGCCTCAAAGGTAGCAAAAGGC...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAGCCTTTTGCTACCTTTaGGGCCAGTCAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKAFCYL*GQSAAA
Trigger: AGCGGCTGCTGACTGGCCTCAAAGGTAGCAAAAGGC...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCGATAGAGTCGGGCTGTaGCAGTTCCCAGCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPDRVGL*QFPAGP
Trigger: CGGACCCGCTGGGAACTGTCACAGCCCGACTCTATC...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCCACCTCAGCTTTTATTaGTCCCAAGCCACCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGHLSFY*SQATCC
Trigger: GCAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTG...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGACATCAAGGGAATTGTTaGAGGACAGCATCAGCATGT +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRHQGNC*RTASAC
Trigger: ACATGCTGATGCTGTCCTTCAACAATTCCCTTGATG...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGGTCTCTTCACTAAAATaGAGCTGTGAACAAGTACAC +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELVSSLK*SCEQVH
Trigger: GTGTACTTGTTCACAGCTTCATTTTAGTGAAGAGAC...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp CCATGTGTGGAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTAAGAAAGTAACAAGAACTCTGTCAGACTaGGTCTCAAAACTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: PCVEALRESGPVATKKVTRTLSD*VSKLAW
Trigger: CCAAGCAAGTTTTGAGACTCAGTCTGACAGAGTTCT...TGTTACTTTCTTAGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTCCACACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCGGCAATGACAGCAGCTaGCTTGACTTTGCTAATGCC +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGGNDSS*LDFANA
Trigger: GGCATTAGCAAAGTCAAGTCAGCTGCTGTCATTGCC...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAGGAGCCAGGAGAGAATaGCCTGTCCCGGTAACTGGA +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTGARRE*PVPVTG
Trigger: TCCAGTTACCGGGACAGGTCATTCTCTCCTGGCTCC...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TTGGCATCATCATTATGCTTGCAAAAACGAACTAGATTTGACAGCCATGGAGTCGGAGCCAGGAGAGAATaGCCTGTCCCGGTAACTGGA +
Preference number: 4 (lower is better)
Translates to: LASSLCLQKRTRFDSHGVGARRE*PVPVTG
Trigger: TCCAGTTACCGGGACAGGTCATTCTCTCCTGGCTCC...GACTCCATGGCTGTCAAATCTAGTTCGTTTTTGCAAGCATAATGATGATGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGATGGAATGCAAATCTTTaGGCTAGTTCTGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRWNANL*ASSVHW
Trigger: CCAGTGGACAGAACTAGCTCAAAGATTTGCATTCCA...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATTTCTTAGTGTTGGCCTaGGAAGGTTGCCCCATGTCC +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDFLVLA*EGCPMS
Trigger: GGACATGGGGCAACCTTCTCAGGCCAACACTAAGAA...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CAGTATCTGCCATCACCTCAGCTTTTATTGATCCCAAGCCACCTGTTGCACTGGGGGTGTTGTGATCCCTaGTTCCATTTCTTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: QYLPSPQLLLIPSHLLHWGCCDP*FHFLPF
Trigger: AAAAGGCAAGAAATGGAATCAGGGATCACAACACCC...CCAGTGCAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTGATGGCAGATACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGAAAGGCGGCTGAATTTTaGTTTGTGCCAATGCTGATC +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRKAAEF*FVPMLI
Trigger: GATCAGCATTGGCACAAATCAAAATTCAGCCGCCTT...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCTTGCCCCAAATCTACTaGACTGCATCTCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGLPQIY*TASPSG
Trigger: CCCAGATGGAGATGCAGTTCAGTAGATTTGGGGCAA...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAAGAGGGTCTGTGGAGTaGAGGCTCCCAGTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQRGSVE*RLPVFP
Trigger: TGGGAACACTGGGAGCCTGCACTCCACAGACCCTCT...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR GCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCCGAAGTTCAGCTGCATaGTGGTTTCCTTCACGACAG +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGRSSAA*WFPSRQ
Trigger: CTGTCGTGAAGGAAACCAGCATGCAGCTGAACTTCG...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp AGTCTGGAATTTGTGTTTGCTTTGAAAACGGTCCTGCAAACCGCCACAAGCCATCGAAGTTCAGCTGCATaGTGGTTTCCTTCACGACAG +
Preference number: 4 (lower is better)
Translates to: SLEFVFALKTVLQTATSHRSSAA*WFPSRQ
Trigger: CTGTCGTGAAGGAAACCAGCATGCAGCTGAACTTCG...ATGGCTTGTGGCGGTTTGCAGGACCGTTTTCAAAGCAAACACAAATTCCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGCTGCTTTACGTTTGGTaGTTTCAGCAAAACCATCCA +
Preference number: 4 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQLLYVW*FQQNHP
Trigger: TGGATGGTTTTGCTGAAAGCACCAAACGTAAAGCAG...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAACGGTGCCATTCGTATTaGTGGGTGTGCTCCACAACC +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQERCHSY*WVCSTT
Trigger: GGTTGTGGAGCACACCCAGCAATACGAATGGCACCG...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATTACTGGCCAAGCTGTTaGCTCGGAAGAGAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDYWPSC*LGRESA
Trigger: TGCAGACTCTCTTCCGAGGCAACAGCTTGGCCAGTA...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAGCTTCACACTCCTGGTaGATGAAGGTGAGCGGCGTG +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTASHSW*MKVSGV
Trigger: CACGCCGCTCACCTTCATGCACCAGGAGTGTGAAGC...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp GAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTAAGAAAGTAACAACGTGGAAGAGCAGATCTGTAATCTaGCCAAGGCTTCCCCATATT +
Preference number: 4 (lower is better)
Translates to: EALRESGPVATKKVTTWKSRSVI*PRLPHI
Trigger: AATATGGGGAAGCCTTGGGCAGATTACAGATCTGCT...CTTCCACGTTGTTACTTTCTTAGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR GCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGATCCCAAGCCACCTGTTaGACTGGTTTTGATGAAACT +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRSQATC*TGFDET
Trigger: AGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGA...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GTGGTATATTTTACCAGTGTAGCTAGAACAGTAAGAAGCAGCGCCTGGATCTTCTTGACCTCATCAAGCTaGAGCACAGCCACAGCTACC +
Preference number: 4 (lower is better)
Translates to: VVYFTSVARTVRSSAWIFLTSSS*STATAT
Trigger: GGTAGCTGTGGCTGTGCTGCAGCTTGATGAGGTCAA...GAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACTGGTAAAATATACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR GCA 90 bp AGCTACCCAAAAGAGGGCTTTGTGCAGAGGCGAGTCCTTATTAAGAAGTGGCTGCAGAGGATTCCGGATTaGCATAAATACTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SYPKEGFVQRRVLIKKWLQRIPD*HKYFLW
Trigger: CCAGAGGAAGTATTTATGGCAATCCGGAATCCTCTG...CAGCCACTTCTTAATAAGGACTCGCCTCTGCACAAAGCCCTCTTTTGGGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp CTGGTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACTCCATTTGCTTGCAGTaGCACTCCAGAGGATTCCGG +
Preference number: 4 (lower is better)
Translates to: LVSSSIPGRYVSIKASRNSICLQ*HSRGFR
Trigger: CCGGAATCCTCTGGAGTGGCACTGCAAGCAAATGGA...GTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR GCA 90 bp ATGATATTAATGACCAGTCCATGTGTGGAAGCTCTAAGGGAGAGCGGACCTGTGAGTTGGATAGGTGGCTaGAAGGTATCCTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: MILMTSPCVEALRESGPVSWIGG*KVSFRT
Trigger: GGTTCTGAAGGATACCTTGCAGCCACCTATCCAACT...CACAGGTCCGCTCTCCCTTAGAGCTTCCACACATGGACTGGTCATTAATATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCGCGCTTCTTTGCTTCTaGACTTGGCTTGCGGATCCG +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRALLCF*TWLADP
Trigger: CGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGC...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGCGCTTCTTTGCTTCTaGACTTGGCTTGCGGATCCG +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEALLCF*TWLADP
Trigger: CGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGC...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAAACCTGGGAGGGTTaGTGGCTGGCACTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKQTWEG*WLALCL
Trigger: GAGACAGAGTGCCAGCCAGCAACCCTCCCAGGTTTG...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GTAAGATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACACTCTGCACCAAAAGAGGGCTTTGTaGAGAGGCGAGTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: VRCLVLWWGFFMVHHTLHQKRAL*RGESFE
Trigger: CTCAAAGGACTCGCCTCTGCACAAAGCCCTCTTTTG...GTGCAGAGTGTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581790.5
CDS-3UTR CCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAACAAGGAGAGGGTCTGTaGAGTGCAGGCTCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQQGEGL*SAGSQC
Trigger: ACACTGGGAGCCTGCACTCCACAGACCCTCTCCTTG...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGCTGCTGCTTTACGTTTaGTGCTTTCAGCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQLLLYV*CFQQNH
Trigger: ATGGTTTTGCTGAAAGCACCAAACGTAAAGCAGCAG...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGAGGGCCCCTGTTTTCTTaGATTACAAAGCAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRGPLFS*ITKQEL
Trigger: AAGCTCTTGCTTTGTAATCCAAGAAAACAGGGGCCC...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp TCTGGAATTTGTGTTTGCTTTGAAAACGGTCCTGCAAACCGCCACAAGCCATTATCTGCTGTACTGCCTTaGGTTTCGGGCCCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: SGICVCFENGPANRHKPLSAVLP*VSGPCF
Trigger: AAAACAGGGGCCCGAAACCCAAGGCAGTACAGCAGA...TAATGGCTTGTGGCGGTTTGCAGGACCGTTTTCAAAGCAAACACAAATTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCGTGAGCGGCGTGCCCTaGTTTGCAATGGTTAAGGTG +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRVSGVP*FAMVKV
Trigger: CACCTTAACCATTGCAAACCAGGGCACGCCGCTCAC...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTGAGCGGCGTGCCCTaGTTTGCAATGGTTAAGGTG +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEVSGVP*FAMVKV
Trigger: CACCTTAACCATTGCAAACCAGGGCACGCCGCTCAC...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTATGGCTTCACACTCCTaGTGCATGAAGGTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSMASHS*CMKVSG
Trigger: GCCGCTCACCTTCATGCACCAGGAGTGTGAAGCCAT...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAATGGCTTCACACTCCTaGTGCATGAAGGTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEMASHS*CMKVSG
Trigger: GCCGCTCACCTTCATGCACCAGGAGTGTGAAGCCAT...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCCGAATCTTGGTGTGTTaGGGGATAGAGTCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHARILVC*GIESGC
Trigger: ACAGCCCGACTCTATCCCCCAACACACCAAGATTCG...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GTATATTTTACCAGTGTAGCTAGAACAGTAAGAAGCAGCGCCTGGATCTTCGGACGAATCTTGGTGTGTTaGGGGATAGAGTCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VYFTSVARTVRSSAWIFGRILVC*GIESGC
Trigger: ACAGCCCGACTCTATCCCCCAACACACCAAGATTCG...TCCGAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACTGGTAAAATATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp CAGATCTGTAATCTGCCCAAGGCTTCCCCATATTTTTGCTTGAATAGATGGGTAGGTCTGGCCGACAGTTaGATAGGTGGCTGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: QICNLPKASPYFCLNRWVGLADS*IGGCKV
Trigger: TACCTTGCAGCCACCTATCCAACTGTCGGCCAGACC...TACCCATCTATTCAAGCAAAAATATGGGGAAGCCTTGGGCAGATTACAGATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp AATATGAAGACTGATTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATCCTGGCTCGGGGACTaGTCTGGCCGACAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: NMKTDFQMKTGLADYLGQSWLGD*SGRQLD
Trigger: ATCCAACTGTCGGCCAGACCAGTCCCCGAGCCAGGA...TTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAATCAGTCTTCATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTGCAGTGATACTAAGCTaGCTCTGCAGTGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSAVILS*LCSAGG
Trigger: CCCTCCTGCACTGCAGAGCCAGCTTAGTATCACTGC...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTTGGCTTGCGGATCCGTaGCGAGTTCGTCCACTGTTA +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSWLADP*RVRPLL
Trigger: TAACAGTGGACGAACTCGCCACGGATCCGCAAGCCA...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAACTTTGCTTCTGCACTTaGCTTGCGGATCCGTGGCGA +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQELCFCT*LADPWR
Trigger: TCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAG...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp CAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCCTTTGCTTCTGCACTTaGCTTGCGGATCCGTGGCGA +
Preference number: 4 (lower is better)
Translates to: QVWQITWGNELPFKEFGCLCFCT*LADPWR
Trigger: TCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAG...GCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCGCAGCTTGGCATCCTTaGCACTGGGTTACTGATCTA +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGAAWHP*HWVTDL
Trigger: TAGATCAGTAACCCAGTGCCAAGGATGCCAAGCTGC...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAGGCATGCCCCTCGGATaGGAGTACTGGCATAACAGG +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKGMPLG*EYWHNR
Trigger: CCTGTTATGCCAGTACTCCCATCCGAGGGGCATGCC...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAATGTGTCCTGGGCACCTaGCTCAGTCATGAACAGGTG +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQECVLGT*LSHEQV
Trigger: CACCTGTTCATGACTGAGCCAGGTGCCCAGGACACA...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGAAGCTCTGCAACATTTaGGAGAAGAAGGTTATCAGC +
Preference number: 4 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQKLCNI*EKKVIS
Trigger: GCTGATAACCTTCTTCTCCCAAATGTTGCAGAGCTT...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp TCGTCCACTGTTACAGTGGCCAGTGGTAGGGGAGAGTTCAACGTTCTCCTTGTCTACCTTTCACAATGTTaGGGTAATATATCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SSTVTVASGRGEFNVLLVYLSQC*GNISSV
Trigger: CACGGAGGATATATTACCCCAACATTGTGAAAGGTA...GACAAGGAGAACGTTGAACTCTCCCCTACCACTGGCCACTGTAACAGTGGACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTTCTGGCATGTGTGACTaGGGGACCAGTTGGACGAGC +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAASGMCD*GTSWTS
Trigger: GCTCGTCCAACTGGTCCCTCAGTCACACATGCCAGA...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCGCTAGTTCATCCCACTaGGAACAAGGAACCACATTG +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGASSSH*EQGTTL
Trigger: CAATGTGGTTCCTTGTTCTCAGTGGGATGAACTAGC...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCACTTGGTGTACTCCCTaGCCCAGGAGTTACAGTTAT +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGTWCTP*PRSYSY
Trigger: ATAACTGTAACTCCTGGGTCAGGGAGTACACCAAGT...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp AGTGTAGCTAGAACAGTAAGAAGCAGCGCCTGGATCTTCGGATCAGTAAGTACTACTTGGTGTACTCCCTaGCCCAGGAGTTACAGTTAT +
Preference number: 4 (lower is better)
Translates to: SVARTVRSSAWIFGSVSTTWCTP*PRSYSY
Trigger: ATAACTGTAACTCCTGGGTCAGGGAGTACACCAAGT...AGTACTTACTGATCCGAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTAGTCAGCAGCCGCTCATaGTACTTGGTGTACTCCCTG +
Preference number: 4 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLVSSRS*YLVYSL
Trigger: CAGGGAGTACACCAAGTATCATGAGCGGCTGCTGAC...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAGTCAGCAGCCGCTCATaGTACTTGGTGTACTCCCTG +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKVSSRS*YLVYSL
Trigger: CAGGGAGTACACCAAGTATCATGAGCGGCTGCTGAC...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCCAGCGGGTCCGGATATaGATGATAGACTGGACAATG +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAQRVRI*MIDWTM
Trigger: CATTGTCCAGTCTATCATTCATATCCGGACCCGCTG...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TTGAATAGATGGGTACATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCGATAGAGTCGGGCTGTaGCAGTTCCCAGCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: LNRWVHLFFIDGHCYQLVDRVGL*QFPAGP
Trigger: CGGACCCGCTGGGAACTGTCACAGCCCGACTCTATC...GACAAGCTGATAACAATGACCATCAATGAAAAACAGATGTACCCATCTATTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp GATCCCAAGCCACCTGTTGCACTGGTTTTGATGAAACTGTCTAGTACAACATCACACCTCAGCTTTTATTaGTCCCAAGCCACCTGTTGC +
Preference number: 4 (lower is better)
Translates to: DPKPPVALVLMKLSSTTSHLSFY*SQATCC
Trigger: GCAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTG...TGATGTTGTACTAGACAGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR TCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGTCCAATAACCTTGCTTaGAACCAATTTCACATTTCC +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELSNNLA*NQFHIS
Trigger: GGAAATGTGAAATTGGTTTCAAGCAAGGTTATTGGA...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAGTGCGGTACCTGCTaGATACAAGTTGACCTCATC +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGKCGTC*IQVDLI
Trigger: GATGAGGTCAACTTGTATTCAGCAGGTACCGCACTT...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCTGTCAGAGGCTGTTCTaGTGGGCAGTGAGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: QVWQITWGNELPFKEFGCCQRLF*WAVSRL
Trigger: TAACCTGCTCACTGCCCATCAGAACAGCCTCTGACA...GCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422121.2
ENST00000471572.6
CDS-3UTR TCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGCCTGATAAGTCACTGTaGCAGATAATGGCAAATGTA +
Preference number: 4 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQPDKSL*QIMANV
Trigger: TACATTTGCCATTATCTGTCACAGTGACTTATCAGG...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGTACCCAGTTCCAAAATaGCTTTTCCAGGCTATTTAT +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELYPVPK*LFQAIY
Trigger: ATAAATAGCCTGGAAAAGGCATTTTGGAACTGGGTA...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGGTGCCATTCGTATTaGTGGGTGTGCTCCACAACC +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTRCHSY*WVCSTT
Trigger: GGTTGTGGAGCACACCCAGCAATACGAATGGCACCG...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTACGGTGCCATTCGTATTaGTGGGTGTGCTCCACAACC +
Preference number: 4 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLRCHSY*WVCSTT
Trigger: GGTTGTGGAGCACACCCAGCAATACGAATGGCACCG...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAACGGTGCCATTCGTATTaGTGGGTGTGCTCCACAACC +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQRCHSY*WVCSTT
Trigger: GGTTGTGGAGCACACCCAGCAATACGAATGGCACCG...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR GCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTGCAAGGACCGTACAGTaGCTCAGTGATGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAAARTVQ*LSDASL
Trigger: GAGGCTGGCATCACTGAGGCACTGTACGGTCCTTGC...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp CAACAAATTATGCACAACAGGAAAGACTTTGGGAAACACAACACTGGCCTCTGCCCTAAGCCTATGGAGTaGATGAGACCACTGTCTACG +
Preference number: 4 (lower is better)
Translates to: QQIMHNRKDFGKHNTGLCPKPME*MRPLST
Trigger: CGTAGACAGTGGTCTCATGCACTCCATAGGCTTAGG...GCAGAGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGTGCATAATTTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAATACTGGCCAAGCTGTTaGCTCGGAAGAGAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEYWPSC*LGRESA
Trigger: TGCAGACTCTCTTCCGAGGCAACAGCTTGGCCAGTA...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGACTTTATGATCCCTGTTaGTGGAAAGATACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRLYDPC*WKDTAQ
Trigger: TTGGGCAGTATCTTTCCAGCAACAGGGATCATAAAG...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGCTGAGTCTCAAAACTTaGTTGGTCTCTTCACTAAAA +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELLSLKT*LVSSLK
Trigger: TTTTAGTGAAGAGACCAAGCAAGTTTTGAGACTCAG...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GTAAGATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACACTCTGCACACTGGTCCAGCCACTTaGACGTTGGAATATCTCTCA +
Preference number: 4 (lower is better)
Translates to: VRCLVLWWGFFMVHHTLHTGPAT*TLEYLS
Trigger: TGAGAGATATTCCAACGTGCAAGTGGCTGGACCAGT...GTGCAGAGTGTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR GCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCTCCATTTGCTTGCAGTaGCACTCCAGAGGATTCCGG +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRSICLQ*HSRGFR
Trigger: CCGGAATCCTCTGGAGTGGCACTGCAAGCAAATGGA...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAATCCATTTGCTTGCAGTaGCACTCCAGAGGATTCCGG +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQESICLQ*HSRGFR
Trigger: CCGGAATCCTCTGGAGTGGCACTGCAAGCAAATGGA...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp AGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCGCTTCTTTGCTTCTaGACTTGGCTTGCGGATCCG +
Preference number: 4 (lower is better)
Translates to: RFGRLLGAMNCPLKNLDAALLCF*TWLADP
Trigger: CGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGC...TGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR GCA 90 bp AGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCACTGCCAGCGCTTCTTTaGTTCTGCACTTGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: RFGRLLGAMNCPLKNLDALPALL*FCTWLA
Trigger: CGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAG...TGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR GCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCAGACATGCCTCATTATaGCTGGGAGTCGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRRHASL*LGVGEG
Trigger: TCCTTCCCCGACTCCCAGGCATAATGAGGCATGTCT...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp TTTGTCTGGATACACTCTCTTCTTGTTGGCATCTTGATCAGAATTGTATTAAGCGCTTCCTCACATGCCTaGGTGCTGAGCAGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: FVWIHSLLVGILIRIVLSASSHA*VLSSAP
Trigger: GGGAGCACTGCTCAGCACGCAGGCATGTGAGGAAGC...GCTTAATACAATTCTGATCAAGATGCCAACAAGAAGAGAGTGTATCCAGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
CDS-3UTR GCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGACAGCATGCTGTCTCTaGTCTTCAACAATGCTTTTA +
Preference number: 4 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQTACCL*SSTMLL
Trigger: TAAAAGCATTGTTGAAGAGCAGAGACAGCATGCTGT...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGATCTCATTGTGTCCTTTaGTTGCCCAGCAAGACATTT +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRSHCVL*LPSKTF
Trigger: AAATGTCTTGCTGGGCAACCAAAGGACACAATGAGA...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAGTTCAGCTGCATGCTaGTTTCCTTCACGACAGGTG +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHASSAAC*FPSRQV
Trigger: CACCTGTCGTGAAGGAAACCAGCATGCAGCTGAACT...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGAGTTCAGCTGCATGCTaGTTTCCTTCACGACAGGTG +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSSSAAC*FPSRQV
Trigger: CACCTGTCGTGAAGGAAACCAGCATGCAGCTGAACT...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATTGCCATTCGTATTGCTaGGTGTGCTCCACAACCTTG +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDCHSYC*VCSTTL
Trigger: CAAGGTTGTGGAGCACACCCAGCAATACGAATGGCA...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCGAATCTTGGTGTGTTaGGGGATAGAGTCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRRILVC*GIESGC
Trigger: ACAGCCCGACTCTATCCCCCAACACACCAAGATTCG...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCCAGCCACTTGCACGTTaGAATATCTCTCATGCATGC +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGQPLAR*NISHAC
Trigger: GCATGCATGAGAGATATTCCAACGTGCAAGTGGCTG...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTGCTAGTTCTGTCCACTaGTCCAGCCACTTGCACGTT +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFIASSVH*SSHLHV
Trigger: AACGTGCAAGTGGCTGGACCAGTGGACAGAACTAGC...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ACCTCAGCTTTTATTGATCCCAAGCCACCTGTTGCACTGGTTTTGATGAAACTGCGACAGTTGGATAGGTaGCTGCAAGGTATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: TSAFIDPKPPVALVLMKLRQLDR*LQGILQ
Trigger: CTGAAGGATACCTTGCAGCCACCTATCCAACTGTCG...CAGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGATCAATAAAAGCTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAGGTCTGGCCGACAGTTaGATAGGTGGCTGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLGLADS*IGGCKV
Trigger: TACCTTGCAGCCACCTATCCAACTGTCGGCCAGACC...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCGTAAGAAGCAGCGCCTaGATCTTCGGATCAGTAAGT +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGVRSSA*IFGSVS
Trigger: ACTTACTGATCCGAAGATCCAGGCGCTGCTTCTTAC...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp TTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTGGCTTGCGGATCCGTaGCGAGTTCGTCCACTGTTA +
Preference number: 4 (lower is better)
Translates to: FGRLLGAMNCPLKNLDAAWLADP*RVRPLL
Trigger: TAACAGTGGACGAACTCGCCACGGATCCGCAAGCCA...AGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp TTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCATCATGGCTTGCGGATCCGTaGCGAGTTCGTCCACTGTTA +
Preference number: 4 (lower is better)
Translates to: LKPISHFQKPKLQQYLPSWLADP*RVRPLL
Trigger: TAACAGTGGACGAACTCGCCACGGATCCGCAAGCCA...TGATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTAGGGAGGGTTGCTGGCTaGCACTCTGTCTCCCCAACT +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLGRVAG*HSVSPT
Trigger: AGTTGGGGAGACAGAGTGCCAGCCAGCAACCCTCCC...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp GTGGTATATTTTACCAGTGTAGCTAGAACAGTAAGAAGCAGCGCCTGGATCTTCCGCTGGCTAACCACCTaGTATAAACAGTGGCACACA +
Preference number: 4 (lower is better)
Translates to: VVYFTSVARTVRSSAWIFRWLTT*YKQWHT
Trigger: TGTGTGCCACTGTTTATACCAGGTGGTTAGCCAGCG...GAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACTGGTAAAATATACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp CTTTCCAACCCAGGACTGTGGTCTGTCTCTCCATTTGCTGGAGTCTCCTTTAAGGTTTGGCAGATTACTTaGGGCAATGAATTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LSNPGLWSVSPFAGVSFKVWQIT*GNELPF
Trigger: AAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAAC...CTTAAAGGAGACTCCAGCAAATGGAGAGACAGACCACAGTCCTGGGTTGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
CDS-3UTR CCA 90 bp CAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCTTGGCCTTCCAGTGTTaGGATTACACGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: QVWQITWGNELPFKEFGCLAFQC*DYTREP
Trigger: TGGCTCACGCGTGTAATCCCAACACTGGAAGGCCAA...GCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422121.2
CDS-3UTR CCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAGCAAGGCAGAGAAGCTaGGGAATGCTGGGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTARQRS*GMLGSC
Trigger: GCAACTTCCCAGCATTCCCCAGCTTCTCTGCCTTGC...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456735.6
CDS-3UTR CCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGTTACTCTGTCACTCATaGTGGAGTACAGTGATACAA +
Preference number: 4 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQLLCHS*WSTVIQ
Trigger: TTGTATCACTGTACTCCACCATGAGTGACAGAGTAA...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR CAA 72 bp CTCGGGTCAGAACTGCCTAAATTAAGTAATGCGATATaGAGCAGTGTCCCAGGGACATCTTTTGGCCGAATC +
Preference number: 4 (lower is better)
Translates to: LGSELPKLSNAI*SSVPGTSFGRI
Trigger: GATTCGGCCAAAAGATGTCCCTGGGACACTGCTCAATATCGCATTACTTAATTTAGGCAGTTCTGACCCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CAA 72 bp GTTGCAAGTGAGGTCATGGAATTAGAAAGGTTAAGGTaGGCAGTGATACTAAGCTGGCTCTGCAGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: VASEVMELERLR*AVILSWLCSAG
Trigger: TCCTGCACTGCAGAGCCAGCTTAGTATCACTGCCAACCTTAACCTTTCTAATTCCATGACCTCACTTGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGATCTGGCATGTGTGACTaGGGGACCAGTTGGACGAGC +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRSGMCD*GTSWTS
Trigger: GCTCGTCCAACTGGTCCCTCAGTCACACATGCCAGA...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp AAGCATGTCTTGTCAATTATTTTGCACATCCTTCCAATAACCTTGCTTGAAACCTCTGGCATGTGTGACTaGGGGACCAGTTGGACGAGC +
Preference number: 4 (lower is better)
Translates to: KHVLSIILHILPITLLETSGMCD*GTSWTS
Trigger: GCTCGTCCAACTGGTCCCTCAGTCACACATGCCAGA...GGTTTCAAGCAAGGTTATTGGAAGGATGTGCAAAATAATTGACAAGACATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAAATCTCTGGCATGTGTaGCTGAGGGACCAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTNLWHV*LRDQLD
Trigger: GTCCAACTGGTCCCTCAGTCACACATGCCAGAGATT...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAAATCTCTGGCATGTGTaGCTGAGGGACCAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQNLWHV*LRDQLD
Trigger: GTCCAACTGGTCCCTCAGTCACACATGCCAGAGATT...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR TCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCGCCATCACTCTTTTCTaGAGTGCTGCTCTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAAITLF*SAALPV
Trigger: AACAGGAAGAGCAGCACTTCAGAAAAGAGTGATGGC...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGGCCATCACTCTTTTCTaGAGTGCTGCTCTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSAITLF*SAALPV
Trigger: AACAGGAAGAGCAGCACTTCAGAAAAGAGTGATGGC...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCATAGGGAGTTCTCCTTaGTCACCCATCATTGTGACC +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAIGSSP*SPIIVT
Trigger: GGTCACAATGATGGGTGATCAAGGAGAACTCCCTAT...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAACTTTTCAGTCATCTaGAGGAGGTTCCGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGNFSVI*RRFRWF
Trigger: AAACCAGCGGAACCTCCTTCAGATGACTGAAAAGTT...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCGCACCGATGCTGTTCTaGGGGAAACGCTGGCTAACC +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPAPMLF*GKRWLT
Trigger: GGTTAGCCAGCGTTTCCCTCAGAACAGCATCGGTGC...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTGCACCGATGCTGTTCTaGGGGAAACGCTGGCTAACC +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSAPMLF*GKRWLT
Trigger: GGTTAGCCAGCGTTTCCCTCAGAACAGCATCGGTGC...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp AAGAATAGCAGTAACTCTTTGTCGTTTGGCATCATCATTATGCTTGCAAAAACGGCACCGATGCTGTTCTaGGGGAAACGCTGGCTAACC +
Preference number: 4 (lower is better)
Translates to: KNSSNSLSFGIIIMLAKTAPMLF*GKRWLT
Trigger: GGTTAGCCAGCGTTTCCCTCAGAACAGCATCGGTGC...CGTTTTTGCAAGCATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATACTTGGTGTACTCCCTaGCCCAGGAGTTACAGTTAT +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDTWCTP*PRSYSY
Trigger: ATAACTGTAACTCCTGGGTCAGGGAGTACACCAAGT...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCGCCTTTTGCTACCTTTaGGGCCAGTCAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPAFCYL*GQSAAA
Trigger: AGCGGCTGCTGACTGGCCTCAAAGGTAGCAAAAGGC...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAACACCTCAGCTTTTATTaGTCCCAAGCCACCTGTTGC +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEHLSFY*SQATCC
Trigger: GCAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTG...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GTGGAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTAAGAAAGTAACAACGTGGTCCAATAACCTTGCTTaGAACCAATTTCACATTTCC +
Preference number: 4 (lower is better)
Translates to: VEALRESGPVATKKVTTWSNNLA*NQFHIS
Trigger: GGAAATGTGAAATTGGTTTCAAGCAAGGTTATTGGA...CCACGTTGTTACTTTCTTAGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR TCA 90 bp GTAAGATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACACTCTGCACCATCAAGGGAATTGTTaGAGGACAGCATCAGCATGT +
Preference number: 4 (lower is better)
Translates to: VRCLVLWWGFFMVHHTLHHQGNC*RTASAC
Trigger: ACATGCTGATGCTGTCCTTCAACAATTCCCTTGATG...GTGCAGAGTGTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCGGAGCCAGGAGAGAATaGCCTGTCCCGGTAACTGGA +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPGARRE*PVPVTG
Trigger: TCCAGTTACCGGGACAGGTCATTCTCTCCTGGCTCC...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp CAACAAATTATGCACAACAGGAAAGACTTTGGGAAACACAACACTGGCCTCTGCCTGCTGAATACAAGTTaGCCTCATCAAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QQIMHNRKDFGKHNTGLCLLNTS*PHQAAA
Trigger: TGCTGCAGCTTGATGAGGTCAACTTGTATTCAGCAG...GCAGAGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGTGCATAATTTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR TCA 90 bp CAACAAATTATGCACAACAGGAAAGACTTTGGGAAACACAACACTGGCCTCTGCAAGTGCGGTACCTGCTaGATACAAGTTGACCTCATC +
Preference number: 4 (lower is better)
Translates to: QQIMHNRKDFGKHNTGLCKCGTC*IQVDLI
Trigger: GATGAGGTCAACTTGTATTCAGCAGGTACCGCACTT...GCAGAGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGTGCATAATTTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR TCA 90 bp TCTGGAATTTGTGTTTGCTTTGAAAACGGTCCTGCAAACCGCCACAAGCCATTATGCAACAATAGCAGGTaGAGGATGCCTGTACCCTTT +
Preference number: 4 (lower is better)
Translates to: SGICVCFENGPANRHKPLCNNSR*RMPVPF
Trigger: AAAGGGTACAGGCATCCTTCACCTGCTATTGTTGCA...TAATGGCTTGTGGCGGTTTGCAGGACCGTTTTCAAAGCAAACACAAATTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR TCA 90 bp GTGGTATATTTTACCAGTGTAGCTAGAACAGTAAGAAGCAGCGCCTGGATCTTCTGCAACAATAGCAGGTaGAGGATGCCTGTACCCTTT +
Preference number: 4 (lower is better)
Translates to: VVYFTSVARTVRSSAWIFCNNSR*RMPVPF
Trigger: AAAGGGTACAGGCATCCTTCACCTGCTATTGTTGCA...GAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACTGGTAAAATATACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR TCA 90 bp AGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCATTCTTAGTGTTGGCCTaGGAAGGTTGCCCCATGTCC +
Preference number: 4 (lower is better)
Translates to: RFGRLLGAMNCPLKNLDAFLVLA*EGCPMS
Trigger: GGACATGGGGCAACCTTCTCAGGCCAACACTAAGAA...TGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR TCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCGGGTGTTGTGATCCCTaGTTCCATTTCTTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGGCCDP*FHFLPF
Trigger: AAAAGGCAAGAAATGGAATCAGGGATCACAACACCC...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp AGTGTAGCTAGAACAGTAAGAAGCAGCGCCTGGATCTTCGGATCAGTAAGTACTGGGTGTTGTGATCCCTaGTTCCATTTCTTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: SVARTVRSSAWIFGSVSTGCCDP*FHFLPF
Trigger: AAAAGGCAAGAAATGGAATCAGGGATCACAACACCC...AGTACTTACTGATCCGAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR TCA 90 bp TGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTTTGTCAGAGGCTGTTCTaGTGGGCAGTGAGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: WQITWGNELPFKEFGCSFCQRLF*WAVSRL
Trigger: TAACCTGCTCACTGCCCATCAGAACAGCCTCTGACA...AAAGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422121.2
ENST00000471572.6
CDS-3UTR TCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGGAAGGTCAAATAGGCTaGAGTGAAGATATTCTTAAC +
Preference number: 4 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQEGQIG*SEDILN
Trigger: GTTAAGAATATCTTCACTTCAGCCTATTTGACCTTC...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGAGAATGATTTTACAGTaGAGGTCAAATAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQRMILQ*RSNRLK
Trigger: CTTCAGCCTATTTGACCTTCACTGTAAAATCATTCT...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAAGAGGGTCTGTGGAGTaGAGGCTCCCAGTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRRGSVE*RLPVFP
Trigger: TGGGAACACTGGGAGCCTGCACTCCACAGACCCTCT...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCATTCCGAAGTTCAGCTaGATGCTGGTTTCCTTCACG +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAIPKFS*MLVSFT
Trigger: CGTGAAGGAAACCAGCATGCAGCTGAACTTCGGAAT...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGATTCCGAAGTTCAGCTaGATGCTGGTTTCCTTCACG +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSIPKFS*MLVSFT
Trigger: CGTGAAGGAAACCAGCATGCAGCTGAACTTCGGAAT...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGATTTATAACTGCTAACTaGGCAACCTTCTTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRFITAN*ATFFRA
Trigger: AGCCCTAAAGAAGGTTGCGCAGTTAGCAGTTATAAA...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACATCGTATTGCTGGGTGTaGTCCACAACCTTGCACTGC +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTSYCWV*STTLHC
Trigger: GCAGTGCAAGGTTGTGGAGCACACCCAGCAATACGA...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATCGTATTGCTGGGTGTaGTCCACAACCTTGCACTGC +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQSYCWV*STTLHC
Trigger: GCAGTGCAAGGTTGTGGAGCACACCCAGCAATACGA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR GCA 90 bp AGTGTAGCTAGAACAGTAAGAAGCAGCGCCTGGATCTTCGGATCAGTAAGTACTAAATGTAAGACTCGGTaGCATTCGTATTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SVARTVRSSAWIFGSVSTKCKTR*HSYCWV
Trigger: CACCCAGCAATACGAATGGCACCGAGTCTTACATTT...AGTACTTACTGATCCGAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTTTAATTCTGCTGTACTaGCTTGGGTTTCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFILILLY*LGFRAP
Trigger: AGGGGCCCGAAACCCAAGGCAGTACAGCAGAATTAA...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp TCCAGAGGATTCCGGATTGCCATAAATACTTCCTCTGGACTCTTGTCATTGAATTTAATTCTGCTGTACTaGCTTGGGTTTCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SRGFRIAINTSSGLLSLNLILLY*LGFRAP
Trigger: AGGGGCCCGAAACCCAAGGCAGTACAGCAGAATTAA...ATTCAATGACAAGAGTCCAGAGGAAGTATTTATGGCAATCCGGAATCCTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGCAGAGCCTCCATTaGTTCCTGAGCAATCTCTGG +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKQQSLH*FLSNLW
Trigger: CCAGAGATTGCTCAGGAAGCAATGGAGGCTCTGCTG...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAGCTTCACACTCCTGGTaGATGAAGGTGAGCGGCGTG +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRASHSW*MKVSGV
Trigger: CACGCCGCTCACCTTCATGCACCAGGAGTGTGAAGC...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp GTAAGATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACACTCTGCACGTGTGGCTCATTGGCTaGCAGTGTCTTACTAATAGA +
Preference number: 4 (lower is better)
Translates to: VRCLVLWWGFFMVHHTLHVWLIG*QCLTNR
Trigger: TCTATTAGTAAGACACTGGCAGCCAATGAGCCACAC...GTGCAGAGTGTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAGCAGATCTGTAATCTaGCCAAGGCTTCCCCATATT +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGSRSVI*PRLPHI
Trigger: AATATGGGGAAGCCTTGGGCAGATTACAGATCTGCT...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ATGATATTAATGACCAGTCCATGTGTGGAAGCTCTAAGGGAGAGCGGACCTGTGAGCTACAGCAGTATCTaGCATCACCTCAGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: MILMTSPCVEALRESGPVSYSSI*HHLSFY
Trigger: ATAAAAGCTGAGGTGATGGCAGATACTGCTGTAGCT...CACAGGTCCGCTCTCCCTTAGAGCTTCCACACATGGACTGGTCATTAATATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTATTGACCTCATCAAGCTaGAGCACAGCCACAGCTACC +
Preference number: 4 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLLTSSS*STATAT
Trigger: GGTAGCTGTGGCTGTGCTGCAGCTTGATGAGGTCAA...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACATTGACCTCATCAAGCTaGAGCACAGCCACAGCTACC +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTLTSSS*STATAT
Trigger: GGTAGCTGTGGCTGTGCTGCAGCTTGATGAGGTCAA...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTTGACCTCATCAAGCTaGAGCACAGCCACAGCTACC +
Preference number: 4 (lower is better)
Translates to: FGRLLGAMNCPLKNLDAALTSSS*STATAT
Trigger: GGTAGCTGTGGCTGTGCTGCAGCTTGATGAGGTCAA...AGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR GCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTATCCATTTGCTTGCAGTaGCACTCCAGAGGATTCCGG +
Preference number: 4 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLSICLQ*HSRGFR
Trigger: CCGGAATCCTCTGGAGTGGCACTGCAAGCAAATGGA...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp TGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTTTCCATTTGCTTGCAGTaGCACTCCAGAGGATTCCGG +
Preference number: 4 (lower is better)
Translates to: WQITWGNELPFKEFGCSFSICLQ*HSRGFR
Trigger: CCGGAATCCTCTGGAGTGGCACTGCAAGCAAATGGA...AAAGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR GCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGATTCTATGTTTTAGGCTaGAGCGACTTCGAACTTCTT +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRFYVLG*SDFELL
Trigger: AAGAAGTTCGAAGTCGCTGCAGCCTAAAACATAGAA...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CAGAACCTTTGGGAGAGGACCATGGCTGAGTCTCCTTTAGTGTCCTATAGGAAGTTCTATGTTTTAGGCTaGAGCGACTTCGAACTTCTT +
Preference number: 4 (lower is better)
Translates to: QNLWERTMAESPLVSYRKFYVLG*SDFELL
Trigger: AAGAAGTTCGAAGTCGCTGCAGCCTAAAACATAGAA...CTTCCTATAGGACACTAAAGGAGACTCAGCCATGGTCCTCTCCCAAAGGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAGTTGGATAGGTGGCTaGAAGGTATCCTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHASWIGG*KVSFRT
Trigger: GGTTCTGAAGGATACCTTGCAGCCACCTATCCAACT...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCTGGTACACCACACTCTaGACAATTCCATGGATTGGA +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGWYTTL*TIPWIG
Trigger: TCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCA...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGATCTGGAATTTGTGTTTaGTTTGAAAACGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRSGICV*FENGPA
Trigger: TGCAGGACCGTTTTCAAAGCAAACACAAATTCCAGA...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTTCGATTCCTGGGGAATaGTGGGAAGTTGCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFISIPGE*WEVASE
Trigger: CTCACTTGCAACTTCCCAGCATTCCCCAGGAATCGA...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCTCGATTCCTGGGGAATaGTGGGAAGTTGCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRSIPGE*WEVASE
Trigger: CTCACTTGCAACTTCCCAGCATTCCCCAGGAATCGA...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCGAAGGCAGAGCTCTGTaGAAATGGCTTTCATCACTG +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAEGRAL*KWLSSL
Trigger: CAGTGATGAAAGCCATTTGCACAGAGCTCTGCCTTC...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAAGACATGCCTCATTATaGCTGGGAGTCGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKRHASL*LGVGEG
Trigger: TCCTTCCCCGACTCCCAGGCATAATGAGGCATGTCT...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCGGGCAGTATTTTTCCTaGTGGCGTACAACTGTTTAC +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGGQYFS*WRTTVY
Trigger: GTAAACAGTTGTACGCCAGCAGGAAAAATACTGCCC...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAAGAGAAGCTGGGGAATaGTGGGAAGTTGCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEREAGE*WEVASE
Trigger: CTCACTTGCAACTTCCCAGCATTCCCCAGCTTCTCT...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456735.6
CDS-3UTR GCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTACAATCACAGCTCACTaGAGCCTCAACCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAATITAH*SLNHLG
Trigger: GCCCAGGTGGTTGAGGCTGCAGTGAGCTGTGATTGT...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCCTGTCCTGTTTTTATTaGAAGCTGCTCGTCGAAGCG +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHALSCFY*KLLVEA
Trigger: CGCTTCGACGAGCAGCTTCCAATAAAAACAGGACAG...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATCTGTCCTGTTTTTATTaGAAGCTGCTCGTCGAAGCG +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDLSCFY*KLLVEA
Trigger: CGCTTCGACGAGCAGCTTCCAATAAAAACAGGACAG...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ACCAGTCCATGTGTGGAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTAAGAAATCAGTCTGTGGGATCTaGTACAGTTTTGTAAATTCA +
Preference number: 4 (lower is better)
Translates to: TSPCVEALRESGPVATKKSVCGI*YSFVNS
Trigger: TGAATTTACAAAACTGTACCAGATCCCACAGACTGA...TTTCTTAGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTCCACACATGGACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGCATCAACCACGTCTTTaGATATATCCTGGATTATTT +
Preference number: 4 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELHQPRL*IYPGLF
Trigger: AAATAATCCAGGATATATCCAAAGACGTGGTTGATG...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCTGCCATTCGTATTGCTaGGTGTGCTCCACAACCTTG +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRCHSYC*VCSTTL
Trigger: CAAGGTTGTGGAGCACACCCAGCAATACGAATGGCA...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATCTGCTGTACTGCCTTaGGTTTCGGGCCCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQSAVLP*VSGPCF
Trigger: AAAACAGGGGCCCGAAACCCAAGGCAGTACAGCAGA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAGCTTGAGAGCATTGTaGAATACCTTCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGSLRAL*NTFRSS
Trigger: AGAGGACCTGAAGGTATTCCACAATGCTCTCAAGCT...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp TTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTGCTAGTTCTGTCCACTaGTCCAGCCACTTGCACGTT +
Preference number: 4 (lower is better)
Translates to: FGRLLGAMNCPLKNLDAAASSVH*SSHLHV
Trigger: AACGTGCAAGTGGCTGGACCAGTGGACAGAACTAGC...AGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp GTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACTTAGCTAGTTCTGTCCACTaGTCCAGCCACTTGCACGTT +
Preference number: 4 (lower is better)
Translates to: VSSSIPGRYVSIKASRNLASSVH*SSHLHV
Trigger: AACGTGCAAGTGGCTGGACCAGTGGACAGAACTAGC...TAAGTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CCA 90 bp ACCACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGATCTTGGCACGCTAGTTCTGTCCACTaGTCCAGCCACTTGCACGTT +
Preference number: 4 (lower is better)
Translates to: TTLCTIPWIGFNKFGSWHASSVH*SSHLHV
Trigger: AACGTGCAAGTGGCTGGACCAGTGGACAGAACTAGC...GTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCGACAGTTGGATAGGTaGCTGCAAGGTATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRRQLDR*LQGILQ
Trigger: CTGAAGGATACCTTGCAGCCACCTATCCAACTGTCG...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAACGACAGTTGGATAGGTaGCTGCAAGGTATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQERQLDR*LQGILQ
Trigger: CTGAAGGATACCTTGCAGCCACCTATCCAACTGTCG...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTACCATGTCCAGGCTCATaGATTTCCTGGCTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLPCPGS*ISWLGD
Trigger: GTCCCCGAGCCAGGAAATCCATGAGCCTGGACATGG...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCCATGTCCAGGCTCATaGATTTCCTGGCTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPPCPGS*ISWLGD
Trigger: GTCCCCGAGCCAGGAAATCCATGAGCCTGGACATGG...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGGTGGGGATTCTTCATaGTACACCACACTCTGCACA +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEGGDSS*YTTLCT
Trigger: TGTGCAGAGTGTGGTGTACCATGAAGAATCCCCACC...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp ATGATATTAATGACCAGTCCATGTGTGGAAGCTCTAAGGGAGAGCGGACCTGTGTGTTTGGTATTGTGGTaGGGATTCTTCATGGTACAC +
Preference number: 4 (lower is better)
Translates to: MILMTSPCVEALRESGPVCLVLW*GFFMVH
Trigger: GTGTACCATGAAGAATCCCCACCACAATACCAAACA...CACAGGTCCGCTCTCCCTTAGAGCTTCCACACATGGACTGGTCATTAATATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp AATATGAAGACTGATTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAAGCAGTGATACTAAGCTaGCTCTGCAGTGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: NMKTDFQMKTGLADYLGQAVILS*LCSAGG
Trigger: CCCTCCTGCACTGCAGAGCCAGCTTAGTATCACTGC...TTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAATCAGTCTTCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACTCCTTGTCGATTCCTaGGGAATGCTGGGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKLLVDS*GMLGSC
Trigger: GCAACTTCCCAGCATTCCCCAGGAATCGACAAGGAG...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp TGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTTCTCCTTGTCGATTCCTaGGGAATGCTGGGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: WQITWGNELPFKEFGCSFLLVDS*GMLGSC
Trigger: GCAACTTCCCAGCATTCCCCAGGAATCGACAAGGAG...AAAGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp TTGGCATCATCATTATGCTTGCAAAAACGAACTAGATTTGACAGCCATGGAGTCCTCCTTGTCGATTCCTaGGGAATGCTGGGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: LASSLCLQKRTRFDSHGVLLVDS*GMLGSC
Trigger: GCAACTTCCCAGCATTCCCCAGGAATCGACAAGGAG...GACTCCATGGCTGTCAAATCTAGTTCGTTTTTGCAAGCATAATGATGATGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAAGAAACACTGGGTTGTaGGAGAGCCAAGACCATGGT +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQERNTGL*ESQDHG
Trigger: ACCATGGTCTTGGCTCTCCCACAACCCAGTGTTTCT...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTAGAAACACTGGGTTGTaGGAGAGCCAAGACCATGGT +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFIRNTGL*ESQDHG
Trigger: ACCATGGTCTTGGCTCTCCCACAACCCAGTGTTTCT...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGACAGTATTTTTCCTGCTaGCGTACAACTGTTTACAGT +
Preference number: 4 (lower is better)
Translates to: FQGLETVKLTPETLGCGRQYFSC*RTTVYS
Trigger: ACTGTAAACAGTTGTACGCCAGCAGGAAAAATACTG...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTCGCTGGCTAACCACCTaGTATAAACAGTGGCACACA +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFIRWLTT*YKQWHT
Trigger: TGTGTGCCACTGTTTATACCAGGTGGTTAGCCAGCG...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356175.7
CDS-3UTR CCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCGCTGGCTAACCACCTaGTATAAACAGTGGCACACA +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRRWLTT*YKQWHT
Trigger: TGTGTGCCACTGTTTATACCAGGTGGTTAGCCAGCG...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000456735.6
CDS-3UTR CCA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGCTTAGCTGTGAAAGCTaGCAAGAATCTTGTTTACTT +
Preference number: 4 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQLSCES*QESCLL
Trigger: AAGTAAACAAGATTCTTGCCAGCTTTCACAGCTAAG...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTGAGATACTCCCACCTTaGTCTCCCAAAGTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAAEILPP*SPKVPG
Trigger: TCCGGGCACTTTGGGAGACCAAGGTGGGAGTATCTC...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGCTATGTTGCCCAAGCTaGTCTTTAACTCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSLCCPS*SLTLGL
Trigger: GAGCCCAAGAGTTAAAGACCAGCTTGGGCAACATAG...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATCGAAGTTCAACCGAGTaGCAATACACAGCATCAATC +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDRSSTE*QYTASI
Trigger: GATTGATGCTGTGTATTGTCACTCGGTTGAACTTCG...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGCGAAGTTCAACCGAGTaGCAATACACAGCATCAATC +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSRSSTE*QYTASI
Trigger: GATTGATGCTGTGTATTGTCACTCGGTTGAACTTCG...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGATCTGGCATGTGTGACTaGGGGACCAGTTGGACGAGC +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRSGMCD*GTSWTS
Trigger: GCTCGTCCAACTGGTCCCTCAGTCACACATGCCAGA...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp CTTCATGGTACACCACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGCCTCCATTGCTTCCTaGGCAATCTCTGGCATGTGT +
Preference number: 4 (lower is better)
Translates to: LHGTPHSAQFHGLDLTNLASIAS*AISGMC
Trigger: ACACATGCCAGAGATTGCTCAGGAAGCAATGGAGGC...CAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCGCACACGAACATACCTaGCCAGATTTAACATCATTG +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGAHEHT*PDLTSL
Trigger: CAATGATGTTAAATCTGGTCAGGTATGTTCGTGTGC...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCTCCCAGGACAGTCTATaGAAACAAGCCTTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHASQDSL*KQAFCY
Trigger: GTAGCAAAAGGCTTGTTTTCATAGACTGTCCTGGGA...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACAGCGGGTCCGGATATaGATGATAGACTGGACAATG +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTQRVRI*MIDWTM
Trigger: CATTGTCCAGTCTATCATTCATATCCGGACCCGCTG...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTCCAAAAATTCTAACGTaGGGTGTGGCTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFIPKILT*GVAHWL
Trigger: CAGCCAATGAGCCACACCTCACGTTAGAATTTTTGG...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTCCAAAAATTCTAACGTaGGGTGTGGCTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSPKILT*GVAHWL
Trigger: CAGCCAATGAGCCACACCTCACGTTAGAATTTTTGG...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATAGAACTCTGTCAGACTaGGTCTCAAAACTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDRTLSD*VSKLAW
Trigger: CCAAGCAAGTTTTGAGACTCAGTCTGACAGAGTTCT...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCATCAGGCAATGACAGCAGCTaGCTTGACTTTGCTAATGCC +
Preference number: 4 (lower is better)
Translates to: LKPISHFQKPKLQQYLPSGNDSS*LDFANA
Trigger: GGCATTAGCAAAGTCAAGTCAGCTGCTGTCATTGCC...TGATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCTGCTGAATACAAGTTaGCCTCATCAAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRLLNTS*PHQAAA
Trigger: TGCTGCAGCTTGATGAGGTCAACTTGTATTCAGCAG...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTAAGTGCGGTACCTGCTaGATACAAGTTGACCTCATC +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSKCGTC*IQVDLI
Trigger: GATGAGGTCAACTTGTATTCAGCAGGTACCGCACTT...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTAAGTGCGGTACCTGCTaGATACAAGTTGACCTCATC +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFIKCGTC*IQVDLI
Trigger: GATGAGGTCAACTTGTATTCAGCAGGTACCGCACTT...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCTTGAGTCCAACAAAATaGTCCATTTGCTTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGLSPTK*SICLQC
Trigger: GCACTGCAAGCAAATGGATCATTTTGTTGGACTCAA...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTTGCAACAATAGCAGGTaGAGGATGCCTGTACCCTTT +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFICNNSR*RMPVPF
Trigger: AAAGGGTACAGGCATCCTTCACCTGCTATTGTTGCA...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCTGCAACAATAGCAGGTaGAGGATGCCTGTACCCTTT +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRCNNSR*RMPVPF
Trigger: AAAGGGTACAGGCATCCTTCACCTGCTATTGTTGCA...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCTGCAACAATAGCAGGTaGAGGATGCCTGTACCCTTT +
Preference number: 4 (lower is better)
Translates to: QVWQITWGNELPFKEFGCCNNSR*RMPVPF
Trigger: AAAGGGTACAGGCATCCTTCACCTGCTATTGTTGCA...GCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR TCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAACAAGTCACTGAGGCTTaGCCTCTATGGTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEQVTEA*PLWFFQ
Trigger: CTGAAAGAACCATAGAGGTCAAGCCTCAGTGACTTG...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAGTCACTGAGGCTTaGCCTCTATGGTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRQVTEA*PLWFFQ
Trigger: CTGAAAGAACCATAGAGGTCAAGCCTCAGTGACTTG...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTATGGTGTCAAGTCACTaGGGCTTGACCTCTATGGTT +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFIMVSSH*GLTSMV
Trigger: AACCATAGAGGTCAAGCCTCAGTGACTTGACACCAT...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCGGACAAAAACATGACTaGGTTCCTGGTTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGGQKHD*VPGFLF
Trigger: AAAGAGGAAACCAGGAACTCAGTCATGTTTTTGTCC...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTCATGAACAGGTGTTaGGTGAATGGAAGACAGAGC +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEVMNRC*VNGRQS
Trigger: GCTCTGTCTTCCATTCACTCAACACCTGTTCATGAC...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATACACAGGATAGAAGCTaGCTGTTTAGGATGTGTCCT +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDTQDRS*LFRMCP
Trigger: AGGACACATCCTAAACAGTCAGCTTCTATCCTGTGT...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCCTGCATGAAAACTGCTaGTTTAGAGCAAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHALHENC*FRARQR
Trigger: TCTCTGCCTTGCTCTAAATCAGCAGTTTTCATGCAG...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456735.6
CDS-3UTR TCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAACCTCCATTGCTTCCTaGGCAATCTCTGGCATGTGT +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQTSIAS*AISGMC
Trigger: ACACATGCCAGAGATTGCTCAGGAAGCAATGGAGGT...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR GCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAACGAAGTTCAGCTGCATaGTGGTTTCCTTCACGACAG +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQRSSAA*WFPSRQ
Trigger: CTGTCGTGAAGGAAACCAGCATGCAGCTGAACTTCG...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR GCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTTCGTATTGCTGGGTGTaGTCCACAACCTTGCACTGC +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAASYCWV*STTLHC
Trigger: GCAGTGCAAGGTTGTGGAGCACACCCAGCAATACGA...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATTAATTCTGCTGTACTaGCTTGGGTTTCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQLILLY*LGFRAP
Trigger: AGGGGCCCGAAACCCAAGGCAGTACAGCAGAATTAA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR GCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTACCTAAGCCTATGGAGTaGATGAGACCACTGTCTACG +
Preference number: 4 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLPKPME*MRPLST
Trigger: CGTAGACAGTGGTCTCATGCACTCCATAGGCTTAGG...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACCTAAGCCTATGGAGTaGATGAGACCACTGTCTACG +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKPKPME*MRPLST
Trigger: CGTAGACAGTGGTCTCATGCACTCCATAGGCTTAGG...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCGTTATAGATATAGACTaGGGAGACGTTGTCGTAAGC +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGVIDID*GDVVVS
Trigger: GCTTACGACAACGTCTCCGCAGTCTATATCTATAAC...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAGCTTCACACTCCTGGTaGATGAAGGTGAGCGGCGTG +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRASHSW*MKVSGV
Trigger: CACGCCGCTCACCTTCATGCACCAGGAGTGTGAAGC...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGTGTGGCTCATTGGCTaGCAGTGTCTTACTAATAGA +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDVWLIG*QCLTNR
Trigger: TCTATTAGTAAGACACTGGCAGCCAATGAGCCACAC...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCGTAGGGAAGATGAGCTaGCACATCAAGGGAATTGTT +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAVGKMS*HIKGIV
Trigger: AACAATTCCCTTGATGTGGCAGCTCATCTTCCCTAC...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTACTGGTCCAGCCACTTaGACGTTGGAATATCTCTCA +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSTGPAT*TLEYLS
Trigger: TGAGAGATATTCCAACGTGCAAGTGGCTGGACCAGT...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAACTGGTCCAGCCACTTaGACGTTGGAATATCTCTCA +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQETGPAT*TLEYLS
Trigger: TGAGAGATATTCCAACGTGCAAGTGGCTGGACCAGT...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCCAAAAGAGGGCTTTGTaGAGAGGCGAGTCCTTATTA +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAQKRAL*RGESLL
Trigger: TAATAAGGACTCGCCTCTGCACAAAGCCCTCTTTTG...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TCATGGTACACCACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGATTGACCTCATCAAGCTaGAGCACAGCCACAGCTACC +
Preference number: 4 (lower is better)
Translates to: SWYTTLCTIPWIGFNKFGLTSSS*STATAT
Trigger: GGTAGCTGTGGCTGTGCTGCAGCTTGATGAGGTCAA...TCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR GCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATCAGAGGATTCCGGATTaGCATAAATACTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDQRIPD*HKYFLW
Trigger: CCAGAGGAAGTATTTATGGCAATCCGGAATCCTCTG...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCCAGAGGATTCCGGATTaGCATAAATACTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAQRIPD*HKYFLW
Trigger: CCAGAGGAAGTATTTATGGCAATCCGGAATCCTCTG...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TCATGGTACACCACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGATCCATTTGCTTGCAGTaGCACTCCAGAGGATTCCGG +
Preference number: 4 (lower is better)
Translates to: SWYTTLCTIPWIGFNKFGSICLQ*HSRGFR
Trigger: CCGGAATCCTCTGGAGTGGCACTGCAAGCAAATGGA...TCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR GCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATTGGTACACCACACTCTaGACAATTCCATGGATTGGA +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDWYTTL*TIPWIG
Trigger: TCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCA...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ACTTTGCAGGTAAGATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACTGGTACACCACACTCTaGACAATTCCATGGATTGGA +
Preference number: 4 (lower is better)
Translates to: TLQVRCLVLWWGFFMVHHWYTTL*TIPWIG
Trigger: TCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCA...GTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTACCTGCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR GCA 90 bp AGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCATCGATTCCTGGGGAATaGTGGGAAGTTGCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: RFGRLLGAMNCPLKNLDASIPGE*WEVASE
Trigger: CTCACTTGCAACTTCCCAGCATTCCCCAGGAATCGA...TGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR GCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTGCCAGCGCTTCTTTaGTTCTGCACTTGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPLPALL*FCTWLA
Trigger: CGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAG...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTCTGCCAGCGCTTCTTTaGTTCTGCACTTGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSLPALL*FCTWLA
Trigger: CGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAG...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATCCCCTTACCTCCATTaGTTCCTGAGCAATCTCTGG +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQSPYLH*FLSNLW
Trigger: CCAGAGATTGCTCAGGAAGCAATGGAGGTAAGGGGA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAAGTTCAGCTGCATGCTaGTTTCCTTCACGACAGGTG +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQSSAAC*FPSRQV
Trigger: CACCTGTCGTGAAGGAAACCAGCATGCAGCTGAACT...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CCA 90 bp TTGGCATCATCATTATGCTTGCAAAAACGAACTAGATTTGACAGCCATGGAGTCAGTTCAGCTGCATGCTaGTTTCCTTCACGACAGGTG +
Preference number: 4 (lower is better)
Translates to: LASSLCLQKRTRFDSHGVSSAAC*FPSRQV
Trigger: CACCTGTCGTGAAGGAAACCAGCATGCAGCTGAACT...GACTCCATGGCTGTCAAATCTAGTTCGTTTTTGCAAGCATAATGATGATGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATGCCATTCGTATTGCTaGGTGTGCTCCACAACCTTG +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQCHSYC*VCSTTL
Trigger: CAAGGTTGTGGAGCACACCCAGCAATACGAATGGCA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGGGGCCCCTGTTTTCTTaGATTACAAAGCAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSGPLFS*ITKQEL
Trigger: AAGCTCTTGCTTTGTAATCCAAGAAAACAGGGGCCC...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAAGGCTTTCAGCAGCCTaGCCATCTTCCATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKRLSAA*PSSILA
Trigger: AGCCAAAATGGAAGATGGCCAGGCTGCTGAAAGCCT...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTAAGGCTTTCAGCAGCCTaGCCATCTTCCATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLRLSAA*PSSILA
Trigger: AGCCAAAATGGAAGATGGCCAGGCTGCTGAAAGCCT...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTTTGCTAGGCCCGGTATaGGTAAGGTCCACTACAATT +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFILLGPV*VRSTTI
Trigger: AATTGTAGTGGACCTTACCCATACCGGGCCTAGCAA...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCTTGCTAGGCCCGGTATaGGTAAGGTCCACTACAATT +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRLLGPV*VRSTTI
Trigger: AATTGTAGTGGACCTTACCCATACCGGGCCTAGCAA...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTTTGCTAGGCCCGGTATaGGTAAGGTCCACTACAATT +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSLLGPV*VRSTTI
Trigger: AATTGTAGTGGACCTTACCCATACCGGGCCTAGCAA...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTCAGCCACTTGCACGTTaGAATATCTCTCATGCATGC +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFIQPLAR*NISHAC
Trigger: GCATGCATGAGAGATATTCCAACGTGCAAGTGGCTG...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp GGTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACTTCAGCCACTTGCACGTTaGAATATCTCTCATGCATGC +
Preference number: 4 (lower is better)
Translates to: GFFINSRQVRVNQGIKKLQPLAR*NISHAC
Trigger: GCATGCATGAGAGATATTCCAACGTGCAAGTGGCTG...AAGTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CCA 90 bp AATACCTTCAGGTCCTCTTCTAAAGCCAAGGTGGCAGCAGGTAGTTTCTGTTGTGACAACAAGAGCTCTTaGTTGCAGGGATGGATTATA +
Preference number: 4 (lower is better)
Translates to: NTFRSSSKAKVAAGSFCCDNKSS*LQGWII
Trigger: TATAATCCATCCCTGCAACCAAGAGCTCTTGTTGTC...ACAACAGAAACTACCTGCTGCCACCTTGGCTTTAGAAGAGGACCTGAAGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTACGACAGTTGGATAGGTaGCTGCAAGGTATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLRQLDR*LQGILQ
Trigger: CTGAAGGATACCTTGCAGCCACCTATCCAACTGTCG...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTAAGAAGCAGCGCCTaGATCTTCGGATCAGTAAGT +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEVRSSA*IFGSVS
Trigger: ACTTACTGATCCGAAGATCCAGGCGCTGCTTCTTAC...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp AGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGGTGGGGATTCTTCATaGTACACCACACTCTGCACA +
Preference number: 4 (lower is better)
Translates to: RFGRLLGAMNCPLKNLDAGGDSS*YTTLCT
Trigger: TGTGCAGAGTGTGGTGTACCATGAAGAATCCCCACC...TGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCTGTTTGGTATTGTGGTaGGGATTCTTCATGGTACAC +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGCLVLW*GFFMVH
Trigger: GTGTACCATGAAGAATCCCCACCACAATACCAAACA...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp AGTCTGGAATTTGTGTTTGCTTTGAAAACGGTCCTGCAAACCGCCACAAGCCATGGAGGGATTCTTCACTaGTTTCTTCATCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: SLEFVFALKTVLQTATSHGGILH*FLHQFQ
Trigger: CTGGAATTGATGAAGAAACCAGTGAAGAATCCCTCC...ATGGCTTGTGGCGGTTTGCAGGACCGTTTTCAAAGCAAACACAAATTCCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CCA 90 bp AGGAGCAAAATTTGCTATAAACTGATCACAAGGGAATTCCTAATGTTGGTGTCTGCAGTGATACTAAGCTaGCTCTGCAGTGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: RSKICYKLITREFLMLVSAVILS*LCSAGG
Trigger: CCCTCCTGCACTGCAGAGCCAGCTTAGTATCACTGC...AGACACCAACATTAGGAATTCCCTTGTGATCAGTTTATAGCAAATTTTGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468273.1
CDS-3UTR CCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAATTCCTGGGGAATGCTaGGAAGTTGCAAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKIPGEC*EVASEV
Trigger: GACCTCACTTGCAACTTCCCAGCATTCCCCAGGAAT...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp TGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTTATTCCTGGGGAATGCTaGGAAGTTGCAAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: WQITWGNELPFKEFGCSFIPGEC*EVASEV
Trigger: GACCTCACTTGCAACTTCCCAGCATTCCCCAGGAAT...AAAGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGACTTTGCTTCTGCACTTaGCTTGCGGATCCGTGGCGA +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRLCFCT*LADPWR
Trigger: TCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAG...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTGATCATCTGGCAACATaGCAAACCGGATGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSDHLAT*QTGWVH
Trigger: ATGAACCCATCCGGTTTGCCATGTTGCCAGATGATC...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAATGGCTTTCATCACTaGCCAGTAGTAGCAGTATTC +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGNGFHH*PVVAVF
Trigger: GAATACTGCTACTACTGGCCAGTGATGAAAGCCATT...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCAGAGCTCTGTGCAAATaGCTTTCATCACTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRRALCK*LSSLAS
Trigger: ACTGGCCAGTGATGAAAGCCATTTGCACAGAGCTCT...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTAGGAGAGCCAAGACCATaGTGGCAGCTTGGCATCCTT +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLGEPRP*WQLGIL
Trigger: AAGGATGCCAAGCTGCCACCATGGTCTTGGCTCTCC...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACATTACCCCAGAAACACTaGGTTGTGGGAGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTLPQKH*VVGEPR
Trigger: TCTTGGCTCTCCCACAACCCAGTGTTTCTGGGGTAA...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAGGCATGCCCCTCGGATaGGAGTACTGGCATAACAGG +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRGMPLG*EYWHNR
Trigger: CCTGTTATGCCAGTACTCCCATCCGAGGGGCATGCC...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTAAGCCTCCCGAGTAGCTaGGACTACAGGAGTACACCA +
Preference number: 4 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLSLPSS*DYRSTP
Trigger: TGGTGTACTCCTGTAGTCCCAGCTACTCGGGAGGCT...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR CAA 72 bp GTTAGAGTTGAAATTGAGTCCAACAAAATGATCCATTaGCTTGCAGTGCCACTCCAGAGGATTCCGGATTGC +
Preference number: 4 (lower is better)
Translates to: VRVEIESNKMIH*LAVPLQRIPDC
Trigger: GCAATCCGGAATCCTCTGGAGTGGCACTGCAAGCAAATGGATCATTTTGTTGGACTCAATTTCAACTCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CAA 72 bp AGCAAGCTTCACACGATCTTCTTAATGCTATTACGTTaGAAACTGCCAGCGCTTCTTTGCTTCTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: SKLHTIFLMLLR*KLPALLCFCTW
Trigger: CCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACGTAATAGCATTAAGAAGATCGTGTGAAGCTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTCGAAGTTCAACCGAGTaGCAATACACAGCATCAATC +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFIRSSTE*QYTASI
Trigger: GATTGATGCTGTGTATTGTCACTCGGTTGAACTTCG...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp TTGCTTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCCGAAGTTCAACCGAGTaGCAATACACAGCATCAATC +
Preference number: 4 (lower is better)
Translates to: LLETNFTFPEAKATAVSARSSTE*QYTASI
Trigger: GATTGATGCTGTGTATTGTCACTCGGTTGAACTTCG...GGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAATCTCTGGCATGTGTaGCTGAGGGACCAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSNLWHV*LRDQLD
Trigger: GTCCAACTGGTCCCTCAGTCACACATGCCAGAGATT...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTAAATCTCTGGCATGTGTaGCTGAGGGACCAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLNLWHV*LRDQLD
Trigger: GTCCAACTGGTCCCTCAGTCACACATGCCAGAGATT...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp TATCAGCTTGTCAAGAATAGCAGTAACTCTTTGTCGTTTGGCATCATCATTATGAATCTCTGGCATGTGTaGCTGAGGGACCAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: YQLVKNSSNSLSFGIIIMNLWHV*LRDQLD
Trigger: GTCCAACTGGTCCCTCAGTCACACATGCCAGAGATT...CATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTTGACAAGCTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAGCCTCCATTGCTTCCTaGGCAATCTCTGGCATGTGT +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRASIAS*AISGMC
Trigger: ACACATGCCAGAGATTGCTCAGGAAGCAATGGAGGC...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTGCCTCCATTGCTTCCTaGGCAATCTCTGGCATGTGT +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSASIAS*AISGMC
Trigger: ACACATGCCAGAGATTGCTCAGGAAGCAATGGAGGC...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAATGCTGCTCTTCCTGTTaGCATCATATTGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQECCSSC*HHIADR
Trigger: TCTGTCAGCAATATGATGTCAACAGGAAGAGCAGCA...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAGCCATCACTCTTTTCTaGAGTGCTGCTCTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKAITLF*SAALPV
Trigger: AACAGGAAGAGCAGCACTTCAGAAAAGAGTGATGGC...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCAACTTTTCAGTCATCTaGAGGAGGTTCCGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRNFSVI*RRFRWF
Trigger: AAACCAGCGGAACCTCCTTCAGATGACTGAAAAGTT...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAACTTCCAACAGCTTTATaGTCCCTGTTGCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQELPTAL*SLLLER
Trigger: TCTTTCCAGCAACAGGGATCATAAAGCTGTTGGAAG...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTCTTTGTGAGCTAGCTTaGGAGCATTGTGGAATACCT +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFILCELA*EHCGIP
Trigger: AGGTATTCCACAATGCTCTCAAGCTAGCTCACAAAG...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp AGTTACAGTTATAGATATAGACTGCGGAGACGTTGTCGTAAGCAAAGCCAGGAACTTTGTGAGCTAGCTTaGGAGCATTGTGGAATACCT +
Preference number: 4 (lower is better)
Translates to: SYSYRYRLRRRCRKQSQELCELA*EHCGIP
Trigger: AGGTATTCCACAATGCTCTCAAGCTAGCTCACAAAG...TTCCTGGCTTTGCTTACGACAACGTCTCCGCAGTCTATATCTATAACTGTAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAATTTTGTTCGCTCTGCTaGAGTTACTTGGACAGCAGT +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEFCSLC*SYLDSS
Trigger: ACTGCTGTCCAAGTAACTTCAGCAGAGCGAACAAAA...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCTTGCAATGGTTAAGGTaGACTGGTTCTCATCTACTA +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGLQWLR*TGSHLL
Trigger: TAGTAGATGAGAACCAGTTCACCTTAACCATTGCAA...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CTTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCATCCATCAAGGGAATTGTTaGAGGACAGCATCAGCATGT +
Preference number: 4 (lower is better)
Translates to: LETNFTFPEAKATAVSAIHQGNC*RTASAC
Trigger: ACATGCTGATGCTGTCCTTCAACAATTCCCTTGATG...GATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR TCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCGTCTCTTCACTAAAATaGAGCTGTGAACAAGTACAC +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGVSSLK*SCEQVH
Trigger: GTGTACTTGTTCACAGCTTCATTTTAGTGAAGAGAC...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTAGAACTCTGTCAGACTaGGTCTCAAAACTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFIRTLSD*VSKLAW
Trigger: CCAAGCAAGTTTTGAGACTCAGTCTGACAGAGTTCT...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCAGAACTCTGTCAGACTaGGTCTCAAAACTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRRTLSD*VSKLAW
Trigger: CCAAGCAAGTTTTGAGACTCAGTCTGACAGAGTTCT...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAATGGAATGCAAATCTTTaGGCTAGTTCTGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEWNANL*ASSVHW
Trigger: CCAGTGGACAGAACTAGCTCAAAGATTTGCATTCCA...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTACTGCTGAATACAAGTTaGCCTCATCAAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLLLNTS*PHQAAA
Trigger: TGCTGCAGCTTGATGAGGTCAACTTGTATTCAGCAG...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR TCA 90 bp AGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAAAGTGCGGTACCTGCTaGATACAAGTTGACCTCATC +
Preference number: 4 (lower is better)
Translates to: RFGRLLGAMNCPLKNLDAKCGTC*IQVDLI
Trigger: GATGAGGTCAACTTGTATTCAGCAGGTACCGCACTT...TGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTTTCTTAGTGTTGGCCTaGGAAGGTTGCCCCATGTCC +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSFLVLA*EGCPMS
Trigger: GGACATGGGGCAACCTTCTCAGGCCAACACTAAGAA...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TGGCCTCTGCTAAGTATTCATAAAGAATTCGTTGATCAAACTCATCTGTGGTATTTCTTAGTGTTGGCCTaGGAAGGTTGCCCCATGTCC +
Preference number: 4 (lower is better)
Translates to: WPLLSIHKEFVDQTHLWYFLVLA*EGCPMS
Trigger: GGACATGGGGCAACCTTCTCAGGCCAACACTAAGAA...ATACCACAGATGAGTTTGATCAACGAATTCTTTATGAATACTTAGCAGAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTGGGTGTTGTGATCCCTaGTTCCATTTCTTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSGCCDP*FHFLPF
Trigger: AAAAGGCAAGAAATGGAATCAGGGATCACAACACCC...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GTGGTATATTTTACCAGTGTAGCTAGAACAGTAAGAAGCAGCGCCTGGATCTTCAATTTGTGTTTGCTTTaGAAACGGTCCTGCAAACCG +
Preference number: 4 (lower is better)
Translates to: VVYFTSVARTVRSSAWIFNLCLL*KRSCKP
Trigger: CGGTTTGCAGGACCGTTTTCAAAGCAAACACAAATT...GAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACTGGTAAAATATACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR TCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCTGGGAAGTTGCAAGTaGGGTCATGGAATTAGAAAG +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRLGSCK*GHGIRK
Trigger: CTTTCTAATTCCATGACCTCACTTGCAACTTCCCAG...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAACTGGGAAGTTGCAAGTaGGGTCATGGAATTAGAAAG +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQELGSCK*GHGIRK
Trigger: CTTTCTAATTCCATGACCTCACTTGCAACTTCCCAG...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAACACAGGATAGAAGCTaGCTGTTTAGGATGTGTCCT +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQETQDRS*LFRMCP
Trigger: AGGACACATCCTAAACAGTCAGCTTCTATCCTGTGT...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp TTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTAGATCCACAGAACTTTaGGCTAGTTCTGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: FGRLLGAMNCPLKNLDAARSTEL*ASSVHW
Trigger: CCAGTGGACAGAACTAGCTCAAAGTTCTGTGGATCT...AGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR TCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGAACAAGAAGCAAGAATaGAGACAGTCAGCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSNKKQE*RQSAFP
Trigger: AGGAAACGCTGACTGTCTTCATTCTTGCTTCTTGTT...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp ATAAATCATTCAGCTGATTCTGAACATCTCCATCTACAGGCAAACCATGAAGGACGAAGTTCAGCTGCATaGTGGTTTCCTTCACGACAG +
Preference number: 4 (lower is better)
Translates to: INHSADSEHLHLQANHEGRSSAA*WFPSRQ
Trigger: CTGTCGTGAAGGAAACCAGCATGCAGCTGAACTTCG...TCCTTCATGGTTTGCCTGTAGATGGAGATGTTCAGAATCAGCTGAATGATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR GCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTCGAAGTTCAGCTGCATaGTGGTTTCCTTCACGACAG +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAARSSAA*WFPSRQ
Trigger: CTGTCGTGAAGGAAACCAGCATGCAGCTGAACTTCG...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAATTCCGAAGTTCAGCTaGATGCTGGTTTCCTTCACG +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQIPKFS*MLVSFT
Trigger: CGTGAAGGAAACCAGCATGCAGCTGAACTTCGGAAT...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR GCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGTCCACAACCTTGCACTaGTTTATGAAGTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSSTTLH*FMKCFT
Trigger: GGTGAAACACTTCATAAAGCAGTGCAAGGTTGTGGA...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCTCGTATTGCTGGGTGTaGTCCACAACCTTGCACTGC +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPSYCWV*STTLHC
Trigger: GCAGTGCAAGGTTGTGGAGCACACCCAGCAATACGA...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCAGCAGAGCCTCCATTaGTTCCTGAGCAATCTCTGG +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPQQSLH*FLSNLW
Trigger: CCAGAGATTGCTCAGGAAGCAATGGAGGCTCTGCTG...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTACAGCAGAGCCTCCATTaGTTCCTGAGCAATCTCTGG +
Preference number: 4 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLQQSLH*FLSNLW
Trigger: CCAGAGATTGCTCAGGAAGCAATGGAGGCTCTGCTG...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTCCTAAGCCTATGGAGTaGATGAGACCACTGTCTACG +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAAPKPME*MRPLST
Trigger: CGTAGACAGTGGTCTCATGCACTCCATAGGCTTAGG...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTATACTGGCCAAGCTGTTaGCTCGGAAGAGAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLYWPSC*LGRESA
Trigger: TGCAGACTCTCTTCCGAGGCAACAGCTTGGCCAGTA...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAATGTTCATGCTCTATGTaGTCAGCCAGTTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKCSCSM*SASFPG
Trigger: TCCTGGGAAACTGGCTGAGCACATAGAGCATGAACA...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACATGTTCATGCTCTATGTaGTCAGCCAGTTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTCSCSM*SASFPG
Trigger: TCCTGGGAAACTGGCTGAGCACATAGAGCATGAACA...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp GTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACTTATGTTCATGCTCTATGTaGTCAGCCAGTTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VSSSIPGRYVSIKASRNLCSCSM*SASFPG
Trigger: TCCTGGGAAACTGGCTGAGCACATAGAGCATGAACA...TAAGTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTAGCAGATCTGTAATCTaGCCAAGGCTTCCCCATATT +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFISRSVI*PRLPHI
Trigger: AATATGGGGAAGCCTTGGGCAGATTACAGATCTGCT...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAAGCAGATCTGTAATCTaGCCAAGGCTTCCCCATATT +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQESRSVI*PRLPHI
Trigger: AATATGGGGAAGCCTTGGGCAGATTACAGATCTGCT...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTTCCCAAGCCACCTGTTaGACTGGTTTTGATGAAACT +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFISQATC*TGFDET
Trigger: AGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGA...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp AGTCTGGAATTTGTGTTTGCTTTGAAAACGGTCCTGCAAACCGCCACAAGCCATAATATCTCTCATGCATaGCTCCATGATCTCCAACAA +
Preference number: 4 (lower is better)
Translates to: SLEFVFALKTVLQTATSHNISHA*LHDLQQ
Trigger: TTGTTGGAGATCATGGAGGCATGCATGAGAGATATT...ATGGCTTGTGGCGGTTTGCAGGACCGTTTTCAAAGCAAACACAAATTCCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAACTGGTCCAGCCACTTaGACGTTGGAATATCTCTCA +
Preference number: 4 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLTGPAT*TLEYLS
Trigger: TGAGAGATATTCCAACGTGCAAGTGGCTGGACCAGT...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR GCA 90 bp GTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACTTAACTGGTCCAGCCACTTaGACGTTGGAATATCTCTCA +
Preference number: 4 (lower is better)
Translates to: VSSSIPGRYVSIKASRNLTGPAT*TLEYLS
Trigger: TGAGAGATATTCCAACGTGCAAGTGGCTGGACCAGT...TAAGTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR GCA 90 bp ACAAATTATGCACAACAGGAAAGACTTTGGGAAACACAACACTGGCCTCTGCTACAGAGGATTCCGGATTaGCATAAATACTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TNYAQQERLWETQHWPLLQRIPD*HKYFLW
Trigger: CCAGAGGAAGTATTTATGGCAATCCGGAATCCTCTG...TAGCAGAGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGTGCATAATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR GCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTAATGATCCATTTGCTTaGAGTGCCACTCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFINDPFA*SATPED
Trigger: ATCCTCTGGAGTGGCACTGCAAGCAAATGGATCATT...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp TCTGGAATTTGTGTTTGCTTTGAAAACGGTCCTGCAAACCGCCACAAGCCATTAATAGCAGGTGAAGGATaGCTGTACCCTTTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: SGICVCFENGPANRHKPLIAGEG*LYPFKR
Trigger: CCTTTTAAAAGGGTACAGGCATCCTTCACCTGCTAT...TAATGGCTTGTGGCGGTTTGCAGGACCGTTTTCAAAGCAAACACAAATTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR GCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAAGTTGGATAGGTGGCTaGAAGGTATCCTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTSWIGG*KVSFRT
Trigger: GGTTCTGAAGGATACCTTGCAGCCACCTATCCAACT...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTAGTTGGATAGGTGGCTaGAAGGTATCCTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: FGRLLGAMNCPLKNLDAASWIGG*KVSFRT
Trigger: GGTTCTGAAGGATACCTTGCAGCCACCTATCCAACT...AGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR GCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTAGAAGGCAGAGCTCTGTaGAAATGGCTTTCATCACTG +
Preference number: 4 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLEGRAL*KWLSSL
Trigger: CAGTGATGAAAGCCATTTGCACAGAGCTCTGCCTTC...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTCCAAATCTACTGAACTaGATCTCCATCTGGGCAACT +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSPNLLN*ISIWAT
Trigger: AGTTGCCCAGATGGAGATGCAGTTCAGTAGATTTGG...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAATGTAGACAAAGGAACTaGCAAAGTTTAGGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQECRQRN*QSLGPD
Trigger: ATCCGGGCCTAAACTTTGGCAGTTCCTTTGTCTACA...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCTGTAGACAAAGGAACTaGCAAAGTTTAGGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRCRQRN*QSLGPD
Trigger: ATCCGGGCCTAAACTTTGGCAGTTCCTTTGTCTACA...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGATCCAATGCAACAAATaGCCACAAATTGCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSIQCNK*PQIAFG
Trigger: CCCAAAGGCAATTTGTGGGCATTTGTTGCATTGGAT...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAACTGTCCTGTTTTTATTaGAAGCTGCTCGTCGAAGCG +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQLSCFY*KLLVEA
Trigger: CGCTTCGACGAGCAGCTTCCAATAAAAACAGGACAG...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CCA 90 bp AAACGGTCCTGCAAACCGCCACAAGCCATTAAAACCAAAACTTTGCAGGTAAGATCTCATTGTGTCCTTTaGTTGCCCAGCAAGACATTT +
Preference number: 4 (lower is better)
Translates to: KRSCKPPQAIKTKTLQVRSHCVL*LPSKTF
Trigger: AAATGTCTTGCTGGGCAACCAAAGGACACAATGAGA...TCTTACCTGCAAAGTTTTGGTTTTAATGGCTTGTGGCGGTTTGCAGGACCGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp GTATATTTTACCAGTGTAGCTAGAACAGTAAGAAGCAGCGCCTGGATCTTCGGAAAAATGGCAGATTTCTaGCAGCAACTGTTTGACCAG +
Preference number: 4 (lower is better)
Translates to: VYFTSVARTVRSSAWIFGKMADF*QQLFDQ
Trigger: CTGGTCAAACAGTTGCTGCCAGAAATCTGCCATTTT...TCCGAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACTGGTAAAATATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGAGCCATATCAGTCTGTaGGATCTGGTACAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSSHISL*DLVQFC
Trigger: ACAAAACTGTACCAGATCCCACAGACTGATATGGCT...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp GGTGCCAATTTCACTATAGATGGTATATGCGAGAGCCTTACCTTCCTGGCAAAACTGCTGCTTTACGTTTaGTGCTTTCAGCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: GANFTIDGICESLTFLAKLLLYV*CFQQNH
Trigger: ATGGTTTTGCTGAAAGCACCAAACGTAAAGCAGCAG...TTTTGCCAGGAAGGTAAGGCTCTCGCATATACCATCTATAGTGAAATTGGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CCA 90 bp TGGCACAATGATAACAGGGTGTTGATCTTAGAGTCCAACAAATTATGCACAACATGCCATTCGTATTGCTaGGTGTGCTCCACAACCTTG +
Preference number: 4 (lower is better)
Translates to: WHNDNRVLILESNKLCTTCHSYC*VCSTTL
Trigger: CAAGGTTGTGGAGCACACCCAGCAATACGAATGGCA...TGTTGTGCATAATTTGTTGGACTCTAAGATCAACACCCTGTTATCATTGTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTATCTGCTGTACTGCCTTaGGTTTCGGGCCCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLSAVLP*VSGPCF
Trigger: AAAACAGGGGCCCGAAACCCAAGGCAGTACAGCAGA...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTTCTGCTGTACTGCCTTaGGTTTCGGGCCCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSSAVLP*VSGPCF
Trigger: AAAACAGGGGCCCGAAACCCAAGGCAGTACAGCAGA...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTATCTGCTGTACTGCCTTaGGTTTCGGGCCCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLSAVLP*VSGPCF
Trigger: AAAACAGGGGCCCGAAACCCAAGGCAGTACAGCAGA...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTAGGCTTTCAGCAGCCTaGCCATCTTCCATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAARLSAA*PSSILA
Trigger: AGCCAAAATGGAAGATGGCCAGGCTGCTGAAAGCCT...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCAGCTTGAGAGCATTGTaGAATACCTTCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRSLRAL*NTFRSS
Trigger: AGAGGACCTGAAGGTATTCCACAATGCTCTCAAGCT...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTAGCTTGAGAGCATTGTaGAATACCTTCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSSLRAL*NTFRSS
Trigger: AGAGGACCTGAAGGTATTCCACAATGCTCTCAAGCT...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCTCTGCTGAAGTTACTTaGACAGCAGTAGAACCAACT +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHASAEVT*TAVEPT
Trigger: AGTTGGTTCTACTGCTGTCCAAGTAACTTCAGCAGA...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp AACAAATTTGGATCTTGGCACAATGATAACAGGGTGTTGATCTTAGAGTCCAACCCCAGGGACATCTTTTaGCCGAATCTTGGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: NKFGSWHNDNRVLILESNPRDIF*PNLGVL
Trigger: CAACACACCAAGATTCGGCCAAAAGATGTCCCTGGG...GTTGGACTCTAAGATCAACACCCTGTTATCATTGTGCCAAGATCCAAATTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACAGCCACTTGCACGTTaGAATATCTCTCATGCATGC +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTQPLAR*NISHAC
Trigger: GCATGCATGAGAGATATTCCAACGTGCAAGTGGCTG...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp TGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTTCAGCCACTTGCACGTTaGAATATCTCTCATGCATGC +
Preference number: 4 (lower is better)
Translates to: WQITWGNELPFKEFGCSFQPLAR*NISHAC
Trigger: GCATGCATGAGAGATATTCCAACGTGCAAGTGGCTG...AAAGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTAGCTAGTTCTGTCCACTaGTCCAGCCACTTGCACGTT +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLASSVH*SSHLHV
Trigger: AACGTGCAAGTGGCTGGACCAGTGGACAGAACTAGC...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAGCTAGTTCTGTCCACTaGTCCAGCCACTTGCACGTT +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRASSVH*SSHLHV
Trigger: AACGTGCAAGTGGCTGGACCAGTGGACAGAACTAGC...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCGACAACAAGAGCTCTTaGTTGCAGGGATGGATTATA +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHADNKSS*LQGWII
Trigger: TATAATCCATCCCTGCAACCAAGAGCTCTTGTTGTC...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGACAACAAGAGCTCTTaGTTGCAGGGATGGATTATA +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDDNKSS*LQGWII
Trigger: TATAATCCATCCCTGCAACCAAGAGCTCTTGTTGTC...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAGGTCTGGCCGACAGTTaGATAGGTGGCTGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRGLADS*IGGCKV
Trigger: TACCTTGCAGCCACCTATCCAACTGTCGGCCAGACC...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp TGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTTGTAAGAAGCAGCGCCTaGATCTTCGGATCAGTAAGT +
Preference number: 4 (lower is better)
Translates to: WQITWGNELPFKEFGCSFVRSSA*IFGSVS
Trigger: ACTTACTGATCCGAAGATCCAGGCGCTGCTTCTTAC...AAAGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAACAGGAAAGACTTTaGGAAACACAACACTGGCCT +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRQQERL*ETQHWP
Trigger: AGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTG...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTCAACAGGAAAGACTTTaGGAAACACAACACTGGCCT +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSQQERL*ETQHWP
Trigger: AGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTG...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp TCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACTTAACAATAGGTGGGGATTCTTCATaGTACACCACACTCTGCACA +
Preference number: 4 (lower is better)
Translates to: SSIPGRYVSIKASRNLTIGGDSS*YTTLCT
Trigger: TGTGCAGAGTGTGGTGTACCATGAAGAATCCCCACC...TATTGTTAAGTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAGATGTTTGGTATTGTaGTGGGGATTCTTCATGGTA +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGRCLVL*WGFFMV
Trigger: TACCATGAAGAATCCCCACCACAATACCAAACATCT...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp CTGGTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACGGAGGGATTCTTCACTaGTTTCTTCATCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: LVSSSIPGRYVSIKASRNGGILH*FLHQFQ
Trigger: CTGGAATTGATGAAGAAACCAGTGAAGAATCCCTCC...GTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CCA 90 bp TCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACTTAACAATAATTCCTGGGGAATGCTaGGAAGTTGCAAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SSIPGRYVSIKASRNLTIIPGEC*EVASEV
Trigger: GACCTCACTTGCAACTTCCCAGCATTCCCCAGGAAT...TATTGTTAAGTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp ATAGATGGGTACATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCAAGACTTTGCTTCTGCACTTaGCTTGCGGATCCGTGGCGA +
Preference number: 4 (lower is better)
Translates to: IDGYICFSLMVIVISLSRLCFCT*LADPWR
Trigger: TCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAG...TCTTGACAAGCTGATAACAATGACCATCAATGAAAAACAGATGTACCCATCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGAAGAGTTGATCATCTaGCAACATGGCAAACCGGAT +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEEELII*QHGKPD
Trigger: ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTC...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp AATATGAAGACTGATTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATCCAACCCAGGACTGTaGTCTGTCTCTCCATTTGCT +
Preference number: 4 (lower is better)
Translates to: NMKTDFQMKTGLADYLGQSNPGL*SVSPFA
Trigger: AGCAAATGGAGAGACAGACCACAGTCCTGGGTTGGA...TTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAATCAGTCTTCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422121.2
CDS-3UTR CCA 90 bp CTTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCATCGGGATAGCTATTCCTTaGCAGATGCTTTGTGATACC +
Preference number: 4 (lower is better)
Translates to: LETNFTFPEAKATAVSAIGIAIP*QMLCDT
Trigger: GGTATCACAAAGCATCTGCCAAGGAATAGCTATCCC...GATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCTGTTGTGCTCAGTACTaGCTTTGGTATGTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRCCAQY*LWYVCS
Trigger: AGAACACACATACCAAAGTCAGTACTGAGCACAACA...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACGAAGTTCAACCGAGTaGCAATACACAGCATCAATC +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKRSSTE*QYTASI
Trigger: GATTGATGCTGTGTATTGTCACTCGGTTGAACTTCG...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAACGAAGTTCAACCGAGTaGCAATACACAGCATCAATC +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQRSSTE*QYTASI
Trigger: GATTGATGCTGTGTATTGTCACTCGGTTGAACTTCG...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR TCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAAATCTCTGGCATGTGTaGCTGAGGGACCAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRNLWHV*LRDQLD
Trigger: GTCCAACTGGTCCCTCAGTCACACATGCCAGAGATT...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTGCACACGAACATACCTaGCCAGATTTAACATCATTG +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSAHEHT*PDLTSL
Trigger: CAATGATGTTAAATCTGGTCAGGTATGTTCGTGTGC...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACTTAACAATAATAGGGAGTTCTCCTTaGTCACCCATCATTGTGACC +
Preference number: 4 (lower is better)
Translates to: SSIPGRYVSIKASRNLTIIGSSP*SPIIVT
Trigger: GGTCACAATGATGGGTGATCAAGGAGAACTCCCTAT...TATTGTTAAGTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTGCTAGTTCATCCCACTaGGAACAAGGAACCACATTG +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAAASSSH*EQGTTL
Trigger: CAATGTGGTTCCTTGTTCTCAGTGGGATGAACTAGC...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACTTCCAACAGCTTTATaGTCCCTGTTGCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKLPTAL*SLLLER
Trigger: TCTTTCCAGCAACAGGGATCATAAAGCTGTTGGAAG...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCTCTTTTTCATGTACCTaGTGCCTAGTCATAAATTCC +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGSFSCT*CLVINS
Trigger: GGAATTTATGACTAGGCATCAGGTACATGAAAAAGA...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACTTTGTGAGCTAGCTTaGGAGCATTGTGGAATACCT +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTLCELA*EHCGIP
Trigger: AGGTATTCCACAATGCTCTCAAGCTAGCTCACAAAG...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTATTTTGTTCGCTCTGCTaGAGTTACTTGGACAGCAGT +
Preference number: 4 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLFCSLC*SYLDSS
Trigger: ACTGCTGTCCAAGTAACTTCAGCAGAGCGAACAAAA...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACATTTTGTTCGCTCTGCTaGAGTTACTTGGACAGCAGT +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTFCSLC*SYLDSS
Trigger: ACTGCTGTCCAAGTAACTTCAGCAGAGCGAACAAAA...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCTTGCAATGGTTAAGGTaGACTGGTTCTCATCTACTA +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHALQWLR*TGSHLL
Trigger: TAGTAGATGAGAACCAGTTCACCTTAACCATTGCAA...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTCAGCGGGTCCGGATATaGATGATAGACTGGACAATG +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSQRVRI*MIDWTM
Trigger: CATTGTCCAGTCTATCATTCATATCCGGACCCGCTG...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGATCTTGGCACAATGATCAGCGGGTCCGGATATaGATGATAGACTGGACAATG +
Preference number: 4 (lower is better)
Translates to: LCTIPWIGFNKFGSWHNDQRVRI*MIDWTM
Trigger: CATTGTCCAGTCTATCATTCATATCCGGACCCGCTG...ATCATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp AAGAATAGCAGTAACTCTTTGTCGTTTGGCATCATCATTATGCTTGCAAAAACGCACCTCAGCTTTTATTaGTCCCAAGCCACCTGTTGC +
Preference number: 4 (lower is better)
Translates to: KNSSNSLSFGIIIMLAKTHLSFY*SQATCC
Trigger: GCAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTG...CGTTTTTGCAAGCATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTGGCAATGACAGCAGCTaGCTTGACTTTGCTAATGCC +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSGNDSS*LDFANA
Trigger: GGCATTAGCAAAGTCAAGTCAGCTGCTGTCATTGCC...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAATGGAATGCAAATCTTTaGGCTAGTTCTGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKWNANL*ASSVHW
Trigger: CCAGTGGACAGAACTAGCTCAAAGATTTGCATTCCA...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATCTGGACTCTTGTCATTaGATATACGGAGACTATCTA +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDLDSCH*IYGDYL
Trigger: TAGATAGTCTCCGTATATTCAATGACAAGAGTCCAG...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp ACCTCAGCTTTTATTGATCCCAAGCCACCTGTTGCACTGGTTTTGATGAAACTGCTGGACTCTTGTCATTaGATATACGGAGACTATCTA +
Preference number: 4 (lower is better)
Translates to: TSAFIDPKPPVALVLMKLLDSCH*IYGDYL
Trigger: TAGATAGTCTCCGTATATTCAATGACAAGAGTCCAG...CAGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGATCAATAAAAGCTGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAATTGAGTCCAACAAAATaGTCCATTTGCTTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQELSPTK*SICLQC
Trigger: GCACTGCAAGCAAATGGATCATTTTGTTGGACTCAA...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp AGTTACAGTTATAGATATAGACTGCGGAGACGTTGTCGTAAGCAAAGCCAGGAATTGAGTCCAACAAAATaGTCCATTTGCTTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SYSYRYRLRRRCRKQSQELSPTK*SICLQC
Trigger: GCACTGCAAGCAAATGGATCATTTTGTTGGACTCAA...TTCCTGGCTTTGCTTACGACAACGTCTCCGCAGTCTATATCTATAACTGTAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAGGGTGTTGTGATCCCTaGTTCCATTTCTTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTGCCDP*FHFLPF
Trigger: AAAAGGCAAGAAATGGAATCAGGGATCACAACACCC...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCAATTTGTGTTTGCTTTaGAAACGGTCCTGCAAACCG +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRNLCLL*KRSCKP
Trigger: CGGTTTGCAGGACCGTTTTCAAAGCAAACACAAATT...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAATTTGTGTTTGCTTTaGAAACGGTCCTGCAAACCG +
Preference number: 4 (lower is better)
Translates to: QVWQITWGNELPFKEFGCNLCLL*KRSCKP
Trigger: CGGTTTGCAGGACCGTTTTCAAAGCAAACACAAATT...GCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR TCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTTCATTTCAGGCGGTATaGAATACTACACCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFISFQAV*NTTPLV
Trigger: TACCAAGGGTGTAGTATTTCATACCGCCTGAAATGA...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTTCATTTCAGGCGGTATaGAATACTACACCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSSFQAV*NTTPLV
Trigger: TACCAAGGGTGTAGTATTTCATACCGCCTGAAATGA...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAAAGGCGGCTGAATTTTaGTTTGTGCCAATGCTGATC +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKKAAEF*FVPMLI
Trigger: GATCAGCATTGGCACAAATCAAAATTCAGCCGCCTT...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAATCCAGGACAAAAACATaGCTGAGTTCCTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKSRTKT*LSSWFP
Trigger: AGGAAACCAGGAACTCAGTCATGTTTTTGTCCTGGA...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACATCCAGGACAAAAACATaGCTGAGTTCCTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTSRTKT*LSSWFP
Trigger: AGGAAACCAGGAACTCAGTCATGTTTTTGTCCTGGA...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp AGTTGTCATGGTGCCAATTTCACTATAGATGGTATATGCGAGAGCCTTACCTTCTCTACAGGCAAACCATaGAGGAAACCATCTCATGTT +
Preference number: 4 (lower is better)
Translates to: SCHGANFTIDGICESLTFSTGKP*RKPSHV
Trigger: AACATGAGATGGTTTCCTTCATGGTTTGCCTGTAGA...GAAGGTAAGGCTCTCGCATATACCATCTATAGTGAAATTGGCACCATGACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR TCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGATCATTTGGATTATATaGACAAAGACAGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSIIWII*TKTGLS
Trigger: GCTGAGCCCTGTCTTTGTTCATATAATCCAAATGAT...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp AGTTGTCATGGTGCCAATTTCACTATAGATGGTATATGCGAGAGCCTTACCTTCATTGTGTCCTTTGGTTaGCCAGCAAGACATTTTTCC +
Preference number: 4 (lower is better)
Translates to: SCHGANFTIDGICESLTFIVSFG*PARHFS
Trigger: GGAAAAATGTCTTGCTGGGCAACCAAAGGACACAAT...GAAGGTAAGGCTCTCGCATATACCATCTATAGTGAAATTGGCACCATGACAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR GCA 90 bp TCCAGAGGATTCCGGATTGCCATAAATACTTCCTCTGGACTCTTGTCATTGAATATTGTGTCCTTTGGTTaGCCAGCAAGACATTTTTCC +
Preference number: 4 (lower is better)
Translates to: SRGFRIAINTSSGLLSLNIVSFG*PARHFS
Trigger: GGAAAAATGTCTTGCTGGGCAACCAAAGGACACAAT...ATTCAATGACAAGAGTCCAGAGGAAGTATTTATGGCAATCCGGAATCCTCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp ATAAATCATTCAGCTGATTCTGAACATCTCCATCTACAGGCAAACCATGAAGGAATTCCGAAGTTCAGCTaGATGCTGGTTTCCTTCACG +
Preference number: 4 (lower is better)
Translates to: INHSADSEHLHLQANHEGIPKFS*MLVSFT
Trigger: CGTGAAGGAAACCAGCATGCAGCTGAACTTCGGAAT...TCCTTCATGGTTTGCCTGTAGATGGAGATGTTCAGAATCAGCTGAATGATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR GCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGAATGCGACTAAAGACTaGATTGAAGTTGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSNATKD*IEVVAA
Trigger: AGCTGCAACAACTTCAATGCAGTCTTTAGTCGCATT...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGTTTATAACTGCTAACTaGGCAACCTTCTTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSFITAN*ATFFRA
Trigger: AGCCCTAAAGAAGGTTGCGCAGTTAGCAGTTATAAA...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp ACTTTGCAGGTAAGATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACTTTATAACTGCTAACTaGGCAACCTTCTTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: TLQVRCLVLWWGFFMVHHFITAN*ATFFRA
Trigger: AGCCCTAAAGAAGGTTGCGCAGTTAGCAGTTATAAA...GTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTACCTGCAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAACTGCTTTACGTTTGGTaGTTTCAGCAAAACCATCCA +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQELLYVW*FQQNHP
Trigger: TGGATGGTTTTGCTGAAAGCACCAAACGTAAAGCAG...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp AGTTGTCATGGTGCCAATTTCACTATAGATGGTATATGCGAGAGCCTTACCTTCCTGCTTTACGTTTGGTaGTTTCAGCAAAACCATCCA +
Preference number: 4 (lower is better)
Translates to: SCHGANFTIDGICESLTFLLYVW*FQQNHP
Trigger: TGGATGGTTTTGCTGAAAGCACCAAACGTAAAGCAG...GAAGGTAAGGCTCTCGCATATACCATCTATAGTGAAATTGGCACCATGACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR GCA 90 bp TTATGCACAACAGGAAAGACTTTGGGAAACACAACACTGGCCTCTGCTAAGTATCTGCTTTACGTTTGGTaGTTTCAGCAAAACCATCCA +
Preference number: 4 (lower is better)
Translates to: LCTTGKTLGNTTLASAKYLLYVW*FQQNHP
Trigger: TGGATGGTTTTGCTGAAAGCACCAAACGTAAAGCAG...ATACTTAGCAGAGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGTGCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAATCCACAACCTTGCACTaGTTTATGAAGTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQESTTLH*FMKCFT
Trigger: GGTGAAACACTTCATAAAGCAGTGCAAGGTTGTGGA...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAAAATGTAAGACTCGGTaGCATTCGTATTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKKCKTR*HSYCWV
Trigger: CACCCAGCAATACGAATGGCACCGAGTCTTACATTT...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAAAATGTAAGACTCGGTaGCATTCGTATTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQKCKTR*HSYCWV
Trigger: CACCCAGCAATACGAATGGCACCGAGTCTTACATTT...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR GCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTTTAATTCTGCTGTACTaGCTTGGGTTTCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSLILLY*LGFRAP
Trigger: AGGGGCCCGAAACCCAAGGCAGTACAGCAGAATTAA...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGACCTAAGCCTATGGAGTaGATGAGACCACTGTCTACG +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRPKPME*MRPLST
Trigger: CGTAGACAGTGGTCTCATGCACTCCATAGGCTTAGG...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp GATGGGTACATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCAAGAATATACTGGCCAAGCTGTTaGCTCGGAAGAGAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: DGYICFSLMVIVISLSRIYWPSC*LGRESA
Trigger: TGCAGACTCTCTTCCGAGGCAACAGCTTGGCCAGTA...TATTCTTGACAAGCTGATAACAATGACCATCAATGAAAAACAGATGTACCCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTGAAAAACCTGCGTGCTaGATCAAAGTTGCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSEKPAC*IKVAFH
Trigger: GTGAAAAGCAACTTTGATGCAGCACGCAGGTTTTTC...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCGAAAAACCTGCGTGCTaGATCAAAGTTGCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTREKPAC*IKVAFH
Trigger: GTGAAAAGCAACTTTGATGCAGCACGCAGGTTTTTC...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAGGAAAAACCTGCGTaGTGCATCAAAGTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAKEKPA*CIKVAF
Trigger: AAAAGCAACTTTGATGCAGCACGCAGGTTTTTCCTT...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAACTTTATGATCCCTGTTaGTGGAAAGATACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQELYDPC*WKDTAQ
Trigger: TTGGGCAGTATCTTTCCAGCAACAGGGATCATAAAG...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCGTTATAGATATAGACTaGGGAGACGTTGTCGTAAGC +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRVIDID*GDVVVS
Trigger: GCTTACGACAACGTCTCCGCAGTCTATATCTATAAC...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATTTTAGAAAGACTGATTaGCCTAGGACTTTTGTTCGC +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDFRKTD*PRTFVR
Trigger: GCGAACAAAAGTCCTAGGGCAATCAGTCTTTCTAAA...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ACTTTGCAGGTAAGATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACTTTAGAAAGACTGATTaGCCTAGGACTTTTGTTCGC +
Preference number: 4 (lower is better)
Translates to: TLQVRCLVLWWGFFMVHHFRKTD*PRTFVR
Trigger: GCGAACAAAAGTCCTAGGGCAATCAGTCTTTCTAAA...GTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTACCTGCAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAGTGTGGCTCATTGGCTaGCAGTGTCTTACTAATAGA +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTVWLIG*QCLTNR
Trigger: TCTATTAGTAAGACACTGGCAGCCAATGAGCCACAC...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAATCCCAAGCCACCTGTTaGACTGGTTTTGATGAAACT +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKSQATC*TGFDET
Trigger: AGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGA...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp CCTGTTGCACTGGTTTTGATGAAACTGTCTAGTACAACATCAAGCAGATCTGTATCCCAAGCCACCTGTTaGACTGGTTTTGATGAAACT +
Preference number: 4 (lower is better)
Translates to: PVALVLMKLSSTTSSRSVSQATC*TGFDET
Trigger: AGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGA...TACAGATCTGCTTGATGTTGTACTAGACAGTTTCATCAAAACCAGTGCAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR GCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTAGTAGGGAAGATGAGCTaGCACATCAAGGGAATTGTT +
Preference number: 4 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLVGKMS*HIKGIV
Trigger: AACAATTCCCTTGATGTGGCAGCTCATCTTCCCTAC...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAATATCTCTCATGCATaGCTCCATGATCTCCAACAA +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHANISHA*LHDLQQ
Trigger: TTGTTGGAGATCATGGAGGCATGCATGAGAGATATT...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACAAAAGAGGGCTTTGTaGAGAGGCGAGTCCTTATTA +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTQKRAL*RGESLL
Trigger: TAATAAGGACTCGCCTCTGCACAAAGCCCTCTTTTG...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTACAAAAGAGGGCTTTGTaGAGAGGCGAGTCCTTATTA +
Preference number: 4 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLQKRAL*RGESLL
Trigger: TAATAAGGACTCGCCTCTGCACAAAGCCCTCTTTTG...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR GCA 90 bp TTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTCAGAGGATTCCGGATTaGCATAAATACTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FGRLLGAMNCPLKNLDAAQRIPD*HKYFLW
Trigger: CCAGAGGAAGTATTTATGGCAATCCGGAATCCTCTG...AGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR GCA 90 bp AGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAAATGATCCATTTGCTTaGAGTGCCACTCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: RFGRLLGAMNCPLKNLDANDPFA*SATPED
Trigger: ATCCTCTGGAGTGGCACTGCAAGCAAATGGATCATT...TGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR GCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATTTACGTAAATGTGGGTaGTGTTGTGATGAGGAAATC +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDLRKCG*CCDEEI
Trigger: GATTTCCTCATCACAACAGCACCCACATTTACGTAA...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TGCAGGTTTTGTTCAAGAAGTGCGGTACCTGCTGAATACAAGTTGACCTCATCATTACGTAAATGTGGGTaGTGTTGTGATGAGGAAATC +
Preference number: 4 (lower is better)
Translates to: CRFCSRSAVPAEYKLTSSLRKCG*CCDEEI
Trigger: GATTTCCTCATCACAACAGCACCCACATTTACGTAA...TGATGAGGTCAACTTGTATTCAGCAGGTACCGCACTTCTTGAACAAAACCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp GTGGTATATTTTACCAGTGTAGCTAGAACAGTAAGAAGCAGCGCCTGGATCTTCTTACGTAAATGTGGGTaGTGTTGTGATGAGGAAATC +
Preference number: 4 (lower is better)
Translates to: VVYFTSVARTVRSSAWIFLRKCG*CCDEEI
Trigger: GATTTCCTCATCACAACAGCACCCACATTTACGTAA...GAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACTGGTAAAATATACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR GCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACATGGTACACCACACTCTaGACAATTCCATGGATTGGA +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTWYTTL*TIPWIG
Trigger: TCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCA...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCTCTGGAATTTGTGTTTaGTTTGAAAACGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHASGICV*FENGPA
Trigger: TGCAGGACCGTTTTCAAAGCAAACACAAATTCCAGA...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp GTGGTATATTTTACCAGTGTAGCTAGAACAGTAAGAAGCAGCGCCTGGATCTTCTCTGGAATTTGTGTTTaGTTTGAAAACGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: VVYFTSVARTVRSSAWIFSGICV*FENGPA
Trigger: TGCAGGACCGTTTTCAAAGCAAACACAAATTCCAGA...GAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACTGGTAAAATATACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR GCA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCACCTCCCACTTTCTTTaGAGTTGTTCTGAACACTTA +
Preference number: 4 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHATSHFL*SCSEHL
Trigger: TAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTACATTGAGTAAGACATaGCTCATTATGCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSTLSKT*LIMPGS
Trigger: ACTCCCAGGCATAATGAGGCATGTCTTACTCAATGT...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp AGTTGTCATGGTGCCAATTTCACTATAGATGGTATATGCGAGAGCCTTACCTTCACTATAGATGGTATATaGGAGAGCCTTACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SCHGANFTIDGICESLTFTIDGI*ESLTFL
Trigger: CAGGAAGGTAAGGCTCTCGCATATACCATCTATAGT...GAAGGTAAGGCTCTCGCATATACCATCTATAGTGAAATTGGCACCATGACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CCA 90 bp AGTTGTCATGGTGCCAATTTCACTATAGATGGTATATGCGAGAGCCTTACCTTCAGCCATATCAGTCTGTaGGATCTGGTACAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SCHGANFTIDGICESLTFSHISL*DLVQFC
Trigger: ACAAAACTGTACCAGATCCCACAGACTGATATGGCT...GAAGGTAAGGCTCTCGCATATACCATCTATAGTGAAATTGGCACCATGACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAACTGCTGCTTTACGTTTaGTGCTTTCAGCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQELLLYV*CFQQNH
Trigger: ATGGTTTTGCTGAAAGCACCAAACGTAAAGCAGCAG...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTTGCCATTCGTATTGCTaGGTGTGCTCCACAACCTTG +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSCHSYC*VCSTTL
Trigger: CAAGGTTGTGGAGCACACCCAGCAATACGAATGGCA...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAGGGCCCCTGTTTTCTTaGATTACAAAGCAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQGPLFS*ITKQEL
Trigger: AAGCTCTTGCTTTGTAATCCAAGAAAACAGGGGCCC...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CCA 90 bp AGGGTGTTGATCTTAGAGTCCAACAAATTATGCACAACAGGAAAGACTTTGGGAGGGCCCCTGTTTTCTTaGATTACAAAGCAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RVLILESNKLCTTGKTLGGPLFS*ITKQEL
Trigger: AAGCTCTTGCTTTGTAATCCAAGAAAACAGGGGCCC...TCCCAAAGTCTTTCCTGTTGTGCATAATTTGTTGGACTCTAAGATCAACACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGATCTGCTGTACTGCCTTaGGTTTCGGGCCCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRSAVLP*VSGPCF
Trigger: AAAACAGGGGCCCGAAACCCAAGGCAGTACAGCAGA...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp TGGCCTCTGCTAAGTATTCATAAAGAATTCGTTGATCAAACTCATCTGTGGTATAGGCTTTCAGCAGCCTaGCCATCTTCCATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: WPLLSIHKEFVDQTHLWYRLSAA*PSSILA
Trigger: AGCCAAAATGGAAGATGGCCAGGCTGCTGAAAGCCT...ATACCACAGATGAGTTTGATCAACGAATTCTTTATGAATACTTAGCAGAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCTCTGCTGAAGTTACTTaGACAGCAGTAGAACCAACT +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRSAEVT*TAVEPT
Trigger: AGTTGGTTCTACTGCTGTCCAAGTAACTTCAGCAGA...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTATGGTTAAGGTGAACTaGTTCTCATCTACTAGGCAG +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSMVKVN*FSSTRQ
Trigger: CTGCCTAGTAGATGAGAACCAGTTCACCTTAACCAT...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAATGGTTAAGGTGAACTaGTTCTCATCTACTAGGCAG +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEMVKVN*FSSTRQ
Trigger: CTGCCTAGTAGATGAGAACCAGTTCACCTTAACCAT...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGACCCAGGGACATCTTTTaGCCGAATCTTGGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRPRDIF*PNLGVL
Trigger: CAACACACCAAGATTCGGCCAAAAGATGTCCCTGGG...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCCCAGGGACATCTTTTaGCCGAATCTTGGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPPRDIF*PNLGVL
Trigger: CAACACACCAAGATTCGGCCAAAAGATGTCCCTGGG...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTCCCAGGGACATCTTTTaGCCGAATCTTGGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSPRDIF*PNLGVL
Trigger: CAACACACCAAGATTCGGCCAAAAGATGTCCCTGGG...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp TCATGGTACACCACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGACAGCCACTTGCACGTTaGAATATCTCTCATGCATGC +
Preference number: 4 (lower is better)
Translates to: SWYTTLCTIPWIGFNKFGQPLAR*NISHAC
Trigger: GCATGCATGAGAGATATTCCAACGTGCAAGTGGCTG...TCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CCA 90 bp AGTGTAGCTAGAACAGTAAGAAGCAGCGCCTGGATCTTCGGATCAGTAAGTACTTCTTGGTTGCAGGGATaGATTATATTGGAATGCAAA +
Preference number: 4 (lower is better)
Translates to: SVARTVRSSAWIFGSVSTSWLQG*IILECK
Trigger: TTTGCATTCCAATATAATCCATCCCTGCAACCAAGA...AGTACTTACTGATCCGAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTACGACAGTTGGATAGGTaGCTGCAAGGTATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLRQLDR*LQGILQ
Trigger: CTGAAGGATACCTTGCAGCCACCTATCCAACTGTCG...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp AACAAATTTGGATCTTGGCACAATGATAACAGGGTGTTGATCTTAGAGTCCAACGTAAGAAGCAGCGCCTaGATCTTCGGATCAGTAAGT +
Preference number: 4 (lower is better)
Translates to: NKFGSWHNDNRVLILESNVRSSA*IFGSVS
Trigger: ACTTACTGATCCGAAGATCCAGGCGCTGCTTCTTAC...GTTGGACTCTAAGATCAACACCCTGTTATCATTGTGCCAAGATCCAAATTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CCA 90 bp TTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTCAACAGGAAAGACTTTaGGAAACACAACACTGGCCT +
Preference number: 4 (lower is better)
Translates to: FGRLLGAMNCPLKNLDAAQQERL*ETQHWP
Trigger: AGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTG...AGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAACAAATTTGGATCTTaGCACAATGATAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGNKFGS*HNDNRV
Trigger: CACCCTGTTATCATTGTGCCAAGATCCAAATTTGTT...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTGGTGGGGATTCTTCATaGTACACCACACTCTGCACA +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSGGDSS*YTTLCT
Trigger: TGTGCAGAGTGTGGTGTACCATGAAGAATCCCCACC...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp CTGATCACAAGGGAATTCCTAATGTTGGTGTCTTATATTGTTGCTCAAAGTCATGGTGGGGATTCTTCATaGTACACCACACTCTGCACA +
Preference number: 4 (lower is better)
Translates to: LITREFLMLVSYIVAQSHGGDSS*YTTLCT
Trigger: TGTGCAGAGTGTGGTGTACCATGAAGAATCCCCACC...ATGACTTTGAGCAACAATATAAGACACCAACATTAGGAATTCCCTTGTGATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468273.1
CDS-3UTR CCA 90 bp TTTGGATCTTGGCACAATGATAACAGGGTGTTGATCTTAGAGTCCAACAAATTAGGTGGGGATTCTTCATaGTACACCACACTCTGCACA +
Preference number: 4 (lower is better)
Translates to: FGSWHNDNRVLILESNKLGGDSS*YTTLCT
Trigger: TGTGCAGAGTGTGGTGTACCATGAAGAATCCCCACC...TAATTTGTTGGACTCTAAGATCAACACCCTGTTATCATTGTGCCAAGATCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTGGAGGGATTCTTCACTaGTTTCTTCATCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSGGILH*FLHQFQ
Trigger: CTGGAATTGATGAAGAAACCAGTGAAGAATCCCTCC...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTGGAGGGATTCTTCACTaGTTTCTTCATCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFIGGILH*FLHQFQ
Trigger: CTGGAATTGATGAAGAAACCAGTGAAGAATCCCTCC...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGGAGGGATTCTTCACTaGTTTCTTCATCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEGGILH*FLHQFQ
Trigger: CTGGAATTGATGAAGAAACCAGTGAAGAATCCCTCC...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAGAAGAGTTGATCATCTaGCAACATGGCAAACCGGAT +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTEELII*QHGKPD
Trigger: ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTC...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTATTACCCCAGAAACACTaGGTTGTGGGAGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLLPQKH*VVGEPR
Trigger: TCTTGGCTCTCCCACAACCCAGTGTTTCTGGGGTAA...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp CTTGTTGGCATCTTGATCAGAATTGTATTAAGCCAGTTCATTTATTTGGGAAGACAGCCTCCTGGTAGCTaGGACTATAGGCATAAGCCA +
Preference number: 4 (lower is better)
Translates to: LVGILIRIVLSQFIYLGRQPPGS*DYRHKP
Trigger: TGGCTTATGCCTATAGTCCCAGCTACCAGGAGGCTG...TCTTCCCAAATAAATGAACTGGCTTAATACAATTCTGATCAAGATGCCAACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
3UTR CAA 72 bp GCTTTTATTGATCCCAAGCCACCTGTTGCACTGGTTTaGATGAAACTGTCTAGTACAACATCAAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: AFIDPKPPVALV*MKLSSTTSSRS
Trigger: AGATCTGCTTGATGTTGTACTAGACAGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGATCAATAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR CAA 72 bp GCCAGTGTCTTACTAATAGAGACAATAAAGAGGGTGTaGTTGGCAGGGATACATAAACCTGATGTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: ASVLLIETIKRV*LAGIHKPDVSS
Trigger: ACTAGAGACATCAGGTTTATGTATCCCTGCCAACAACACCCTCTTTATTGTCTCTATTAGTAAGACACTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAATGTTGTGCTCAGTACTaGCTTTGGTATGTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKCCAQY*LWYVCS
Trigger: AGAACACACATACCAAAGTCAGTACTGAGCACAACA...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATGTTGTGCTCAGTACTaGCTTTGGTATGTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQCCAQY*LWYVCS
Trigger: AGAACACACATACCAAAGTCAGTACTGAGCACAACA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR TCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTCCTTGCACTGCTTTATaGAGTGTTTCACCAAACATA +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFIPCTAL*SVSPNI
Trigger: TATGTTTGGTGAAACACTTCATAAAGCAGTGCAAGG...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTTGCTGCTCTTCCTGTTaGCATCATATTGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAACCSSC*HHIADR
Trigger: TCTGTCAGCAATATGATGTCAACAGGAAGAGCAGCA...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTGCCATCACTCTTTTCTaGAGTGCTGCTCTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSAITLF*SAALPV
Trigger: AACAGGAAGAGCAGCACTTCAGAAAAGAGTGATGGC...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTATAGGGAGTTCTCCTTaGTCACCCATCATTGTGACC +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSIGSSP*SPIIVT
Trigger: GGTCACAATGATGGGTGATCAAGGAGAACTCCCTAT...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTGCTAGTTCATCCCACTaGGAACAAGGAACCACATTG +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSASSSH*EQGTTL
Trigger: CAATGTGGTTCCTTGTTCTCAGTGGGATGAACTAGC...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTAACTTTTCAGTCATCTaGAGGAGGTTCCGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAANFSVI*RRFRWF
Trigger: AAACCAGCGGAACCTCCTTCAGATGACTGAAAAGTT...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp CTTCATGGTACACCACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGAACTTTTCAGTCATCTaGAGGAGGTTCCGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LHGTPHSAQFHGLDLTNLNFSVI*RRFRWF
Trigger: AAACCAGCGGAACCTCCTTCAGATGACTGAAAAGTT...CAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTAAATCACCATTGATTTaGCCAGTTTTGAACCTCCGT +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSKSPLI*PVLNLR
Trigger: ACGGAGGTTCAAAACTGGTCAAATCAATGGTGATTT...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TCATGGTACACCACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGATCCCAGGACAGTCTATaGAAACAAGCCTTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: SWYTTLCTIPWIGFNKFGSQDSL*KQAFCY
Trigger: GTAGCAAAAGGCTTGTTTTCATAGACTGTCCTGGGA...TCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAACCCCATATTTTTGCTTaGATAGATGGGTACATCTGT +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEPHIFA*IDGYIC
Trigger: ACAGATGTACCCATCTATTCAAGCAAAAATATGGGG...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCCCCATATTTTTGCTTaGATAGATGGGTACATCTGT +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRPHIFA*IDGYIC
Trigger: ACAGATGTACCCATCTATTCAAGCAAAAATATGGGG...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATTCCAATAACCTTGCTTaGAACCAATTTCACATTTCC +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDSNNLA*NQFHIS
Trigger: GGAAATGTGAAATTGGTTTCAAGCAAGGTTATTGGA...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TCATGGTACACCACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGATGGAATGCAAATCTTTaGGCTAGTTCTGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: SWYTTLCTIPWIGFNKFGWNANL*ASSVHW
Trigger: CCAGTGGACAGAACTAGCTCAAAGATTTGCATTCCA...TCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACATGCTTTATCTGCCCATaGGACACTCGTTTGCTAATA +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTCFICP*DTRLLI
Trigger: TATTAGCAAACGAGTGTCTCATGGGCAGATAAAGCA...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp AGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCATGCTTTATCTGCCCATaGGACACTCGTTTGCTAATA +
Preference number: 4 (lower is better)
Translates to: RFGRLLGAMNCPLKNLDACFICP*DTRLLI
Trigger: TATTAGCAAACGAGTGTCTCATGGGCAGATAAAGCA...TGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR TCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGACTGCTGAATACAAGTTaGCCTCATCAAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRLLNTS*PHQAAA
Trigger: TGCTGCAGCTTGATGAGGTCAACTTGTATTCAGCAG...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAACTGGACTCTTGTCATTaGATATACGGAGACTATCTA +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQELDSCH*IYGDYL
Trigger: TAGATAGTCTCCGTATATTCAATGACAAGAGTCCAG...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACATTGAGTCCAACAAAATaGTCCATTTGCTTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTLSPTK*SICLQC
Trigger: GCACTGCAAGCAAATGGATCATTTTGTTGGACTCAA...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTATTGAGTCCAACAAAATaGTCCATTTGCTTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLLSPTK*SICLQC
Trigger: GCACTGCAAGCAAATGGATCATTTTGTTGGACTCAA...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR TCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCTGCAACAATAGCAGGTaGAGGATGCCTGTACCCTTT +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPCNNSR*RMPVPF
Trigger: AAAGGGTACAGGCATCCTTCACCTGCTATTGTTGCA...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp GGTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACTTAGGAGCCTTTGTGTCTaGTATCAAGTGATCAAAACT +
Preference number: 4 (lower is better)
Translates to: GFFINSRQVRVNQGIKKLRSLCV*YQVIKT
Trigger: AGTTTTGATCACTTGATATCAGACACAAAGGCTCCT...AAGTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR TCA 90 bp AATATGAAGACTGATTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAAGGGTGTTGTGATCCCTaGTTCCATTTCTTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: NMKTDFQMKTGLADYLGQGCCDP*FHFLPF
Trigger: AAAAGGCAAGAAATGGAATCAGGGATCACAACACCC...TTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAATCAGTCTTCATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR TCA 90 bp AATATGAAGACTGATTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAACTGGGAAGTTGCAAGTaGGGTCATGGAATTAGAAAG +
Preference number: 4 (lower is better)
Translates to: NMKTDFQMKTGLADYLGQLGSCK*GHGIRK
Trigger: CTTTCTAATTCCATGACCTCACTTGCAACTTCCCAG...TTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAATCAGTCTTCATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR TCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAAAGGCTTCGAAGAGTTaGTCATCTGGCAACATGGCA +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRKASKS*SSGNMA
Trigger: TGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTT...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCATGGTGTCAAGTCACTaGGGCTTGACCTCTATGGTT +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPMVSSH*GLTSMV
Trigger: AACCATAGAGGTCAAGCCTCAGTGACTTGACACCAT...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAACAACACTTTGTTCACTaGTTACCCTGCTCAGAATTA +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEQHFVH*LPCSEL
Trigger: TAATTCTGAGCAGGGTAATCAGTGAACAAAGTGTTG...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTCAACACTTTGTTCACTaGTTACCCTGCTCAGAATTA +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSQHFVH*LPCSEL
Trigger: TAATTCTGAGCAGGGTAATCAGTGAACAAAGTGTTG...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCTTGGCACTGGGTTACTaGTCTATTTCTAAACACAGT +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRLALGY*SISKHS
Trigger: ACTGTGTTTAGAAATAGATCAGTAACCCAGTGCCAA...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAGTCATGAACAGGTGTTaGGTGAATGGAAGACAGAGC +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRVMNRC*VNGRQS
Trigger: GCTCTGTCTTCCATTCACTCAACACCTGTTCATGAC...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTACCTACAGAACAGAGATaGGCACAAACAAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLPTEQR*AQTSHS
Trigger: GCTGTGACTTGTTTGTGCTCATCTCTGTTCTGTAGG...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGGTAAGATTTAGAAAGTaGCTCTTTCCCACCATATAC +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSVRFRK*LFPTIY
Trigger: GTATATGGTGGGAAAGAGTCACTTTCTAAATCTTAC...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGATAAGGCATGAAAGATaGAACCAGATGAACACTGTA +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSIRHER*NQMNTV
Trigger: TACAGTGTTCATCTGGTTTCATCTTTCATGCCTTAT...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCAGACATTCCTTGTTGTaGTCAGTACTGACTTTGGTA +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRRHSLL*SVLTLV
Trigger: TACCAAAGTCAGTACTGAGCACAACAAGGAATGTCT...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTAGACATTCCTTGTTGTaGTCAGTACTGACTTTGGTA +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFIRHSLL*SVLTLV
Trigger: TACCAAAGTCAGTACTGAGCACAACAAGGAATGTCT...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAATTGTGTCCTTTGGTTaGCCAGCAAGACATTTTTCC +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQIVSFG*PARHFS
Trigger: GGAAAAATGTCTTGCTGGGCAACCAAAGGACACAAT...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR GCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTAATTCCGAAGTTCAGCTaGATGCTGGTTTCCTTCACG +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLIPKFS*MLVSFT
Trigger: CGTGAAGGAAACCAGCATGCAGCTGAACTTCGGAAT...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTAATGCGACTAAAGACTaGATTGAAGTTGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSNATKD*IEVVAA
Trigger: AGCTGCAACAACTTCAATGCAGTCTTTAGTCGCATT...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCTTTATAACTGCTAACTaGGCAACCTTCTTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRFITAN*ATFFRA
Trigger: AGCCCTAAAGAAGGTTGCGCAGTTAGCAGTTATAAA...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAACTGCTTTACGTTTGGTaGTTTCAGCAAAACCATCCA +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQLLYVW*FQQNHP
Trigger: TGGATGGTTTTGCTGAAAGCACCAAACGTAAAGCAG...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR GCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATCCACAACCTTGCACTaGTTTATGAAGTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQSTTLH*FMKCFT
Trigger: GGTGAAACACTTCATAAAGCAGTGCAAGGTTGTGGA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR GCA 90 bp TTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCATCATCCACAACCTTGCACTaGTTTATGAAGTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: LKPISHFQKPKLQQYLPSSTTLH*FMKCFT
Trigger: GGTGAAACACTTCATAAAGCAGTGCAAGGTTGTGGA...TGATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCAAGGAAAAACCTGCGTaGTGCATCAAAGTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRKEKPA*CIKVAF
Trigger: AAAAGCAACTTTGATGCAGCACGCAGGTTTTTCCTT...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ACTGGTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAAAAGGAAAAACCTGCGTaGTGCATCAAAGTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: TGFFINSRQVRVNQGIKKKEKPA*CIKVAF
Trigger: AAAAGCAACTTTGATGCAGCACGCAGGTTTTTCCTT...TTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAACCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTGTATGCAAGAAGTGTTaGCATCTTATCAAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSVCKKC*HLIKRS
Trigger: CGACCTTTTGATAAGATGGCAACACTTCTTGCATAC...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAGTTATAGATATAGACTaGGGAGACGTTGTCGTAAGC +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKVIDID*GDVVVS
Trigger: GCTTACGACAACGTCTCCGCAGTCTATATCTATAAC...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTATGTTCATGCTCTATGTaGTCAGCCAGTTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLCSCSM*SASFPG
Trigger: TCCTGGGAAACTGGCTGAGCACATAGAGCATGAACA...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAAGCTACAGCAGTATCTaGCATCACCTCAGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKSYSSI*HHLSFY
Trigger: ATAAAAGCTGAGGTGATGGCAGATACTGCTGTAGCT...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATCTGAGTCTCAAAACTTaGTTGGTCTCTTCACTAAAA +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDLSLKT*LVSSLK
Trigger: TTTTAGTGAAGAGACCAAGCAAGTTTTGAGACTCAG...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ACTTTGCAGGTAAGATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACCTGAGTCTCAAAACTTaGTTGGTCTCTTCACTAAAA +
Preference number: 4 (lower is better)
Translates to: TLQVRCLVLWWGFFMVHHLSLKT*LVSSLK
Trigger: TTTTAGTGAAGAGACCAAGCAAGTTTTGAGACTCAG...GTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTACCTGCAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAACTGGTCCAGCCACTTaGACGTTGGAATATCTCTCA +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRTGPAT*TLEYLS
Trigger: TGAGAGATATTCCAACGTGCAAGTGGCTGGACCAGT...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAATAGCAGGTGAAGGATaGCTGTACCCTTTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKIAGEG*LYPFKR
Trigger: CCTTTTAAAAGGGTACAGGCATCCTTCACCTGCTAT...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp AGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAATAGCAGGTGAAGGATaGCTGTACCCTTTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: RFGRLLGAMNCPLKNLDAIAGEG*LYPFKR
Trigger: CCTTTTAAAAGGGTACAGGCATCCTTCACCTGCTAT...TGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR GCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTTTCTATGTTTTAGGCTaGAGCGACTTCGAACTTCTT +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSFYVLG*SDFELL
Trigger: AAGAAGTTCGAAGTCGCTGCAGCCTAAAACATAGAA...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAAGTTGGATAGGTGGCTaGAAGGTATCCTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRSWIGG*KVSFRT
Trigger: GGTTCTGAAGGATACCTTGCAGCCACCTATCCAACT...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATTTCATAATCAGTTTCTaGTACTCTCCTCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDFIISF*YSPHFG
Trigger: CCCAAAATGAGGAGAGTAGCAGAAACTGATTATGAA...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp AATATGAAGACTGATTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGGTACACCACACTCTaGACAATTCCATGGATTGGA +
Preference number: 4 (lower is better)
Translates to: NMKTDFQMKTGLADYLGQWYTTL*TIPWIG
Trigger: TCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCA...TTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAATCAGTCTTCATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR GCA 90 bp AACAAATTTGGATCTTGGCACAATGATAACAGGGTGTTGATCTTAGAGTCCAACTGGTACACCACACTCTaGACAATTCCATGGATTGGA +
Preference number: 4 (lower is better)
Translates to: NKFGSWHNDNRVLILESNWYTTL*TIPWIG
Trigger: TCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCA...GTTGGACTCTAAGATCAACACCCTGTTATCATTGTGCCAAGATCCAAATTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR GCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAATCTGGAATTTGTGTTTaGTTTGAAAACGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQESGICV*FENGPA
Trigger: TGCAGGACCGTTTTCAAAGCAAACACAAATTCCAGA...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCACCTCCCACTTTCTTTaGAGTTGTTCTGAACACTTA +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRTSHFL*SCSEHL
Trigger: TAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTATCAAAGGCTTACACTaGCTGCTATTCCAGGGCCTA +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSIKGLH*LLFQGL
Trigger: TAGGCCCTGGAATAGCAGGCAGTGTAAGCCTTTGAT...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAACATTGAGTAAGACATaGCTCATTATGCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKTLSKT*LIMPGS
Trigger: ACTCCCAGGCATAATGAGGCATGTCTTACTCAATGT...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGACCAAGGATATCCAATaGAACAAATGCCCACAAATT +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSTKDIQ*NKCPQI
Trigger: AATTTGTGGGCATTTGTTGCATTGGATATCCTTGGT...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp AAGAATAGCAGTAACTCTTTGTCGTTTGGCATCATCATTATGCTTGCAAAAACGCTGTCCTGTTTTTATTaGAAGCTGCTCGTCGAAGCG +
Preference number: 4 (lower is better)
Translates to: KNSSNSLSFGIIIMLAKTLSCFY*KLLVEA
Trigger: CGCTTCGACGAGCAGCTTCCAATAAAAACAGGACAG...CGTTTTTGCAAGCATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATCTCATTGTGTCCTTTaGTTGCCCAGCAAGACATTT +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQSHCVL*LPSKTF
Trigger: AAATGTCTTGCTGGGCAACCAAAGGACACAATGAGA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTAAAAATGGCAGATTTCTaGCAGCAACTGTTTGACCAG +
Preference number: 4 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLKMADF*QQLFDQ
Trigger: CTGGTCAAACAGTTGCTGCCAGAAATCTGCCATTTT...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAAAAATGGCAGATTTCTaGCAGCAACTGTTTGACCAG +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTKMADF*QQLFDQ
Trigger: CTGGTCAAACAGTTGCTGCCAGAAATCTGCCATTTT...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAAAAATGGCAGATTTCTaGCAGCAACTGTTTGACCAG +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQKMADF*QQLFDQ
Trigger: CTGGTCAAACAGTTGCTGCCAGAAATCTGCCATTTT...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CCA 90 bp AAAAATTTTAAGAGCCTCCTAGAATTACCAGTTGTCATGGTGCCAATTTCACTAAGTTCAGCTGCATGCTaGTTTCCTTCACGACAGGTG +
Preference number: 4 (lower is better)
Translates to: KNFKSLLELPVVMVPISLSSAAC*FPSRQV
Trigger: CACCTGTCGTGAAGGAAACCAGCATGCAGCTGAACT...TAGTGAAATTGGCACCATGACAACTGGTAATTCTAGGAGGCTCTTAAAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGTCAGTCTGTGGGATCTaGTACAGTTTTGTAAATTCA +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSSVCGI*YSFVNS
Trigger: TGAATTTACAAAACTGTACCAGATCCCACAGACTGA...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAAGCCATATCAGTCTGTaGGATCTGGTACAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQSHISL*DLVQFC
Trigger: ACAAAACTGTACCAGATCCCACAGACTGATATGGCT...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CCA 90 bp TTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCATCAAGCCATATCAGTCTGTaGGATCTGGTACAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LKPISHFQKPKLQQYLPSSHISL*DLVQFC
Trigger: ACAAAACTGTACCAGATCCCACAGACTGATATGGCT...TGATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACTGCTGCTTTACGTTTaGTGCTTTCAGCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTLLLYV*CFQQNH
Trigger: ATGGTTTTGCTGAAAGCACCAAACGTAAAGCAGCAG...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAACTGCTGCTTTACGTTTaGTGCTTTCAGCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQLLLYV*CFQQNH
Trigger: ATGGTTTTGCTGAAAGCACCAAACGTAAAGCAGCAG...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CCA 90 bp AATACCTTCAGGTCCTCTTCTAAAGCCAAGGTGGCAGCAGGTAGTTTCTGTTGTATCCTGGATTATTTCTaGACACAAGATAAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: NTFRSSSKAKVAAGSFCCILDYF*TQDKEN
Trigger: ATTCTCCTTATCTTGTGTCCAGAAATAATCCAGGAT...ACAACAGAAACTACCTGCTGCCACCTTGGCTTTAGAAGAGGACCTGAAGGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp AATACCTTCAGGTCCTCTTCTAAAGCCAAGGTGGCAGCAGGTAGTTTCTGTTGTCATCAACCACGTCTTTaGATATATCCTGGATTATTT +
Preference number: 4 (lower is better)
Translates to: NTFRSSSKAKVAAGSFCCHQPRL*IYPGLF
Trigger: AAATAATCCAGGATATATCCAAAGACGTGGTTGATG...ACAACAGAAACTACCTGCTGCCACCTTGGCTTTAGAAGAGGACCTGAAGGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTGAACTGATGATGGCATaGAAGAACTTTTCAGTCATC +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFIELMMA*KNFSVI
Trigger: GATGACTGAAAAGTTCTTCCATGCCATCATCAGTTC...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTGAGTGGCAAGTTGCCTaGTATAAACAGTGGCACACA +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSEWQVA*YKQWHT
Trigger: TGTGTGCCACTGTTTATACCAGGCAACTTGCCACTC...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358273.9
CDS-3UTR CCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAATGGTTAAGGTGAACTaGTTCTCATCTACTAGGCAG +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKMVKVN*FSSTRQ
Trigger: CTGCCTAGTAGATGAGAACCAGTTCACCTTAACCAT...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAGACAACAAGAGCTCTTaGTTGCAGGGATGGATTATA +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTDNKSS*LQGWII
Trigger: TATAATCCATCCCTGCAACCAAGAGCTCTTGTTGTC...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp TTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTGACAACAAGAGCTCTTaGTTGCAGGGATGGATTATA +
Preference number: 4 (lower is better)
Translates to: FGRLLGAMNCPLKNLDAADNKSS*LQGWII
Trigger: TATAATCCATCCCTGCAACCAAGAGCTCTTGTTGTC...AGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCGTAAGAAGCAGCGCCTaGATCTTCGGATCAGTAAGT +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPVRSSA*IFGSVS
Trigger: ACTTACTGATCCGAAGATCCAGGCGCTGCTTCTTAC...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp CTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGATCTTGGCACAATGATGTAAGAAGCAGCGCCTaGATCTTCGGATCAGTAAGT +
Preference number: 4 (lower is better)
Translates to: LCTIPWIGFNKFGSWHNDVRSSA*IFGSVS
Trigger: ACTTACTGATCCGAAGATCCAGGCGCTGCTTCTTAC...ATCATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAATGGGAAACACAACACTaGCCTCTGCTAAGTATTCAT +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKWETQH*PLLSIH
Trigger: ATGAATACTTAGCAGAGGCCAGTGTTGTGTTTCCCA...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp TTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTGGGAAACACAACACTaGCCTCTGCTAAGTATTCAT +
Preference number: 4 (lower is better)
Translates to: FGRLLGAMNCPLKNLDAAWETQH*PLLSIH
Trigger: ATGAATACTTAGCAGAGGCCAGTGTTGTGTTTCCCA...AGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp AAACGGTCCTGCAAACCGCCACAAGCCATTAAAACCAAAACTTTGCAGGTAAGAAACAAATTTGGATCTTaGCACAATGATAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: KRSCKPPQAIKTKTLQVRNKFGS*HNDNRV
Trigger: CACCCTGTTATCATTGTGCCAAGATCCAAATTTGTT...TCTTACCTGCAAAGTTTTGGTTTTAATGGCTTGTGGCGGTTTGCAGGACCGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACATGTTTGGTATTGTGGTaGGGATTCTTCATGGTACAC +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTCLVLW*GFFMVH
Trigger: GTGTACCATGAAGAATCCCCACCACAATACCAAACA...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp TGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTTTGTTTGGTATTGTGGTaGGGATTCTTCATGGTACAC +
Preference number: 4 (lower is better)
Translates to: WQITWGNELPFKEFGCSFCLVLW*GFFMVH
Trigger: GTGTACCATGAAGAATCCCCACCACAATACCAAACA...AAAGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTAGATGTTTGGTATTGTaGTGGGGATTCTTCATGGTA +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFIRCLVL*WGFFMV
Trigger: TACCATGAAGAATCCCCACCACAATACCAAACATCT...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ACTGGTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAAAGATGTTTGGTATTGTaGTGGGGATTCTTCATGGTA +
Preference number: 4 (lower is better)
Translates to: TGFFINSRQVRVNQGIKKRCLVL*WGFFMV
Trigger: TACCATGAAGAATCCCCACCACAATACCAAACATCT...TTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAACCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAATTCCTGGGGAATGCTaGGAAGTTGCAAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRIPGEC*EVASEV
Trigger: GACCTCACTTGCAACTTCCCAGCATTCCCCAGGAAT...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTACATGGCAAACCGGATaGGTTCATTATAAAACAGGA +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSTWQTG*VHYKTG
Trigger: TCCTGTTTTATAATGAACCCATCCGGTTTGCCATGT...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTAGATCATCTGGCAACATaGCAAACCGGATGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLDHLAT*QTGWVH
Trigger: ATGAACCCATCCGGTTTGCCATGTTGCCAGATGATC...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAGATCATCTGGCAACATaGCAAACCGGATGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRDHLAT*QTGWVH
Trigger: ATGAACCCATCCGGTTTGCCATGTTGCCAGATGATC...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCAGAGCTCTGTGCAAATaGCTTTCATCACTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPRALCK*LSSLAS
Trigger: ACTGGCCAGTGATGAAAGCCATTTGCACAGAGCTCT...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp AGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGTTTGGCAGATTACTTaGGGCAATGAATTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: RFGRLLGAMNCPLKNLDAVWQIT*GNELPF
Trigger: AAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAAC...TGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422121.2
ENST00000471572.6
CDS-3UTR CCA 90 bp ACTGATCACAAGGGAATTCCTAATGTTGGTGTCTTATATTGTTGCTCAAAGTCATCACATTTACTGACCTaGGGAATGCTGGGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: TDHKGIPNVGVLYCCSKSSHLLT*GMLGSC
Trigger: GCAACTTCCCAGCATTCCCCAGGTCAGTAAATGTGA...TGACTTTGAGCAACAATATAAGACACCAACATTAGGAATTCCCTTGTGATCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468273.1
CDS-3UTR CCA 90 bp GGTGCCAATTTCACTATAGATGGTATATGCGAGAGCCTTACCTTCCTGGCAAAATTCAGTAGCACTATATaGACACATACCCTAAGTACA +
Preference number: 4 (lower is better)
Translates to: GANFTIDGICESLTFLAKFSSTI*THTLST
Trigger: TGTACTTAGGGTATGTGTCCATATAGTGCTACTGAA...TTTTGCCAGGAAGGTAAGGCTCTCGCATATACCATCTATAGTGAAATTGGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTACTCCAGGCACATATTaGTTTCATCTCTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAATPGTY*FHLSEL
Trigger: GAGCTCTGAGAGATGAAACCAATATGTGCCTGGAGT...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAACCTTGCACTGCTTTATaGAGTGTTTCACCAAACATA +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQPCTAL*SVSPNI
Trigger: TATGTTTGGTGAAACACTTCATAAAGCAGTGCAAGG...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTTGCTGCTCTTCCTGTTaGCATCATATTGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSCCSSC*HHIADR
Trigger: TCTGTCAGCAATATGATGTCAACAGGAAGAGCAGCA...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TTGAATAGATGGGTACATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCGCCATCACTCTTTTCTaGAGTGCTGCTCTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LNRWVHLFFIDGHCYQLVAITLF*SAALPV
Trigger: AACAGGAAGAGCAGCACTTCAGAAAAGAGTGATGGC...GACAAGCTGATAACAATGACCATCAATGAAAAACAGATGTACCCATCTATTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAACTTTTCAGTCATCTaGAGGAGGTTCCGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSNFSVI*RRFRWF
Trigger: AAACCAGCGGAACCTCCTTCAGATGACTGAAAAGTT...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGACTTCCAACAGCTTTATaGTCCCTGTTGCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRLPTAL*SLLLER
Trigger: TCTTTCCAGCAACAGGGATCATAAAGCTGTTGGAAG...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTTCTTTTTCATGTACCTaGTGCCTAGTCATAAATTCC +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFISFSCT*CLVINS
Trigger: GGAATTTATGACTAGGCATCAGGTACATGAAAAAGA...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAATCTTTTTCATGTACCTaGTGCCTAGTCATAAATTCC +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQESFSCT*CLVINS
Trigger: GGAATTTATGACTAGGCATCAGGTACATGAAAAAGA...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAAAATCACCATTGATTTaGCCAGTTTTGAACCTCCGT +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTKSPLI*PVLNLR
Trigger: ACGGAGGTTCAAAACTGGTCAAATCAATGGTGATTT...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTATCCCAGGACAGTCTATaGAAACAAGCCTTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLSQDSL*KQAFCY
Trigger: GTAGCAAAAGGCTTGTTTTCATAGACTGTCCTGGGA...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTCTTTGTGAGCTAGCTTaGGAGCATTGTGGAATACCT +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSLCELA*EHCGIP
Trigger: AGGTATTCCACAATGCTCTCAAGCTAGCTCACAAAG...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCAAGAATAGCAGTAACCCAAAAATTCTAACGTaGGGTGTGGCTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: HLFFIDGHCYQLVKNSSNPKILT*GVAHWL
Trigger: CAGCCAATGAGCCACACCTCACGTTAGAATTTTTGG...GTTACTGCTATTCTTGACAAGCTGATAACAATGACCATCAATGAAAAACAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR TCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCATCAAGGGAATTGTTaGAGGACAGCATCAGCATGT +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPHQGNC*RTASAC
Trigger: ACATGCTGATGCTGTCCTTCAACAATTCCCTTGATG...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTCATCAAGGGAATTGTTaGAGGACAGCATCAGCATGT +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSHQGNC*RTASAC
Trigger: ACATGCTGATGCTGTCCTTCAACAATTCCCTTGATG...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAACAAGTACACAGAGAGTaGATGATATTAATGACCAGT +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEQVHRE*MILMTS
Trigger: ACTGGTCATTAATATCATTCACTCTCTGTGTACTTG...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GGTGTTGATCTTAGAGTCCAACAAATTATGCACAACAGGAAAGACTTTGGGAAATGCTTTATCTGCCCATaGGACACTCGTTTGCTAATA +
Preference number: 4 (lower is better)
Translates to: GVDLRVQQIMHNRKDFGKCFICP*DTRLLI
Trigger: TATTAGCAAACGAGTGTCTCATGGGCAGATAAAGCA...TTTCCCAAAGTCTTTCCTGTTGTGCATAATTTGTTGGACTCTAAGATCAACACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACTGGACTCTTGTCATTaGATATACGGAGACTATCTA +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKLDSCH*IYGDYL
Trigger: TAGATAGTCTCCGTATATTCAATGACAAGAGTCCAG...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTACTGGACTCTTGTCATTaGATATACGGAGACTATCTA +
Preference number: 4 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLLDSCH*IYGDYL
Trigger: TAGATAGTCTCCGTATATTCAATGACAAGAGTCCAG...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR TCA 90 bp TGGCACAATGATAACAGGGTGTTGATCTTAGAGTCCAACAAATTATGCACAACATTGAGTCCAACAAAATaGTCCATTTGCTTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: WHNDNRVLILESNKLCTTLSPTK*SICLQC
Trigger: GCACTGCAAGCAAATGGATCATTTTGTTGGACTCAA...TGTTGTGCATAATTTGTTGGACTCTAAGATCAACACCCTGTTATCATTGTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR TCA 90 bp TTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTAGGAGCCTTTGTGTCTaGTATCAAGTGATCAAAACT +
Preference number: 4 (lower is better)
Translates to: FGRLLGAMNCPLKNLDAARSLCV*YQVIKT
Trigger: AGTTTTGATCACTTGATATCAGACACAAAGGCTCCT...AGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR TCA 90 bp CCTGTTGCACTGGTTTTGATGAAACTGTCTAGTACAACATCAAGCAGATCTGTAAGGAGCCTTTGTGTCTaGTATCAAGTGATCAAAACT +
Preference number: 4 (lower is better)
Translates to: PVALVLMKLSSTTSSRSVRSLCV*YQVIKT
Trigger: AGTTTTGATCACTTGATATCAGACACAAAGGCTCCT...TACAGATCTGCTTGATGTTGTACTAGACAGTTTCATCAAAACCAGTGCAACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGACTGGGAAGTTGCAAGTaGGGTCATGGAATTAGAAAG +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRLGSCK*GHGIRK
Trigger: CTTTCTAATTCCATGACCTCACTTGCAACTTCCCAG...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp ACTGATCACAAGGGAATTCCTAATGTTGGTGTCTTATATTGTTGCTCAAAGTCACTGGGAAGTTGCAAGTaGGGTCATGGAATTAGAAAG +
Preference number: 4 (lower is better)
Translates to: TDHKGIPNVGVLYCCSKSLGSCK*GHGIRK
Trigger: CTTTCTAATTCCATGACCTCACTTGCAACTTCCCAG...TGACTTTGAGCAACAATATAAGACACCAACATTAGGAATTCCCTTGTGATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468273.1
CDS-3UTR TCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACATTTCAAAGGCGGCTaGATTTTGATTTGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTHFKGG*ILICAN
Trigger: ATTGGCACAAATCAAAATTCAGCCGCCTTTGAAATG...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp CTGATCACAAGGGAATTCCTAATGTTGGTGTCTTATATTGTTGCTCAAAGTCATAAAGATCACATTTACTaGCCTGGGGAATGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LITREFLMLVSYIVAQSHKDHIY*PGECWE
Trigger: TTCCCAGCATTCCCCAGGTCAGTAAATGTGATCTTT...ATGACTTTGAGCAACAATATAAGACACCAACATTAGGAATTCCCTTGTGATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468273.1
CDS-3UTR TCA 90 bp TTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTGCTGAATATGAAGACTaGTTTCCAAATGAAGACAGG +
Preference number: 4 (lower is better)
Translates to: FGRLLGAMNCPLKNLDAAAEYED*FPNEDR
Trigger: CCTGTCTTCATTTGGAAATCAGTCTTCATATTCAGC...AGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR TCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATACCATTTCCAGAAATaGCATCTACCTGTTACTCAC +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQYHFQK*HLPVTH
Trigger: GTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR GCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAAGACATTCCTTGTTGTaGTCAGTACTGACTTTGGTA +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQRHSLL*SVLTLV
Trigger: TACCAAAGTCAGTACTGAGCACAACAAGGAATGTCT...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR GCA 90 bp GTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACTTAAGACATTCCTTGTTGTaGTCAGTACTGACTTTGGTA +
Preference number: 4 (lower is better)
Translates to: VSSSIPGRYVSIKASRNLRHSLL*SVLTLV
Trigger: TACCAAAGTCAGTACTGAGCACAACAAGGAATGTCT...TAAGTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTATTGTGTCCTTTGGTTaGCCAGCAAGACATTTTTCC +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAAIVSFG*PARHFS
Trigger: GGAAAAATGTCTTGCTGGGCAACCAAAGGACACAAT...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAAATGCGACTAAAGACTaGATTGAAGTTGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQNATKD*IEVVAA
Trigger: AGCTGCAACAACTTCAATGCAGTCTTTAGTCGCATT...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR GCA 90 bp CAGATCTGTAATCTGCCCAAGGCTTCCCCATATTTTTGCTTGAATAGATGGGTAGGCTTTAAATTTAAATaGTGTTTCCTTCAGGAGTCG +
Preference number: 4 (lower is better)
Translates to: QICNLPKASPYFCLNRWVGFKFK*CFLQES
Trigger: CGACTCCTGAAGGAAACAGCATTTAAATTTAAAGCC...TACCCATCTATTCAAGCAAAAATATGGGGAAGCCTTGGGCAGATTACAGATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATTTATAACTGCTAACTaGGCAACCTTCTTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQFITAN*ATFFRA
Trigger: AGCCCTAAAGAAGGTTGCGCAGTTAGCAGTTATAAA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR GCA 90 bp TTGCTTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCTACCCAGTTCCAAAATaGCTTTTCCAGGCTATTTAT +
Preference number: 4 (lower is better)
Translates to: LLETNFTFPEAKATAVSAYPVPK*LFQAIY
Trigger: ATAAATAGCCTGGAAAAGGCATTTTGGAACTGGGTA...GGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTAAAATGTAAGACTCGGTaGCATTCGTATTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLKCKTR*HSYCWV
Trigger: CACCCAGCAATACGAATGGCACCGAGTCTTACATTT...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCAAATGTAAGACTCGGTaGCATTCGTATTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPKCKTR*HSYCWV
Trigger: CACCCAGCAATACGAATGGCACCGAGTCTTACATTT...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTAAAATGTAAGACTCGGTaGCATTCGTATTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLKCKTR*HSYCWV
Trigger: CACCCAGCAATACGAATGGCACCGAGTCTTACATTT...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATACAGGAACTTCTATCTaGCTGCTTATTTTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDTGTSI*LLIFKK
Trigger: CTTCTTAAAAATAAGCAGGCAGATAGAAGTTCCTGT...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGACAGGAACTTCTATCTaGCTGCTTATTTTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSTGTSI*LLIFKK
Trigger: CTTCTTAAAAATAAGCAGGCAGATAGAAGTTCCTGT...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAGTATGCAAGAAGTGTTaGCATCTTATCAAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTVCKKC*HLIKRS
Trigger: CGACCTTTTGATAAGATGGCAACACTTCTTGCATAC...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAATTTAGAAAGACTGATTaGCCTAGGACTTTTGTTCGC +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKFRKTD*PRTFVR
Trigger: GCGAACAAAAGTCCTAGGGCAATCAGTCTTTCTAAA...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTGCTTCCCCATATTTTTaGTTGAATAGATGGGTACAT +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSASPYF*LNRWVH
Trigger: ATGTACCCATCTATTCAAGCAAAAATATGGGGAAGC...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCGCTTCCCCATATTTTTaGTTGAATAGATGGGTACAT +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRASPYF*LNRWVH
Trigger: ATGTACCCATCTATTCAAGCAAAAATATGGGGAAGC...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAAATATCTCTCATGCATaGCTCCATGATCTCCAACAA +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTNISHA*LHDLQQ
Trigger: TTGTTGGAGATCATGGAGGCATGCATGAGAGATATT...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAAATATCTCTCATGCATaGCTCCATGATCTCCAACAA +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKNISHA*LHDLQQ
Trigger: TTGTTGGAGATCATGGAGGCATGCATGAGAGATATT...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGACAAAAGAGGGCTTTGTaGAGAGGCGAGTCCTTATTA +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRQKRAL*RGESLL
Trigger: TAATAAGGACTCGCCTCTGCACAAAGCCCTCTTTTG...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTCAGAGGATTCCGGATTaGCATAAATACTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSQRIPD*HKYFLW
Trigger: CCAGAGGAAGTATTTATGGCAATCCGGAATCCTCTG...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAATGATCCATTTGCTTaGAGTGCCACTCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSNDPFA*SATPED
Trigger: ATCCTCTGGAGTGGCACTGCAAGCAAATGGATCATT...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ATCTTCGGATCAGTAAGTACTTCTTCATCCAAGAGAACATTTGATTCAGACACTAATGATCCATTTGCTTaGAGTGCCACTCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: IFGSVSTSSSKRTFDSDTNDPFA*SATPED
Trigger: ATCCTCTGGAGTGGCACTGCAAGCAAATGGATCATT...AGTGTCTGAATCAAATGTTCTCTTGGATGAAGAAGTACTTACTGATCCGAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR GCA 90 bp CTTTGGGAAACACAACACTGGCCTCTGCTAAGTATTCATAAAGAATTCGTTGATATAGCAGGTGAAGGATaGCTGTACCCTTTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: LWETQHWPLLSIHKEFVDIAGEG*LYPFKR
Trigger: CCTTTTAAAAGGGTACAGGCATCCTTCACCTGCTAT...ATCAACGAATTCTTTATGAATACTTAGCAGAGGCCAGTGTTGTGTTTCCCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR GCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTTTCATAATCAGTTTCTaGTACTCTCCTCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSFIISF*YSPHFG
Trigger: CCCAAAATGAGGAGAGTAGCAGAAACTGATTATGAA...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTATGCACAACAGGAAAGACTTTGGGAAACACAACACTGGCCTCTGCTAAGTATTTCATAATCAGTTTCTaGTACTCTCCTCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: LCTTGKTLGNTTLASAKYFIISF*YSPHFG
Trigger: CCCAAAATGAGGAGAGTAGCAGAAACTGATTATGAA...ATACTTAGCAGAGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGTGCATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR GCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAATTACGTAAATGTGGGTaGTGTTGTGATGAGGAAATC +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKLRKCG*CCDEEI
Trigger: GATTTCCTCATCACAACAGCACCCACATTTACGTAA...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTTTTACGTAAATGTGGGTaGTGTTGTGATGAGGAAATC +
Preference number: 4 (lower is better)
Translates to: WQITWGNELPFKEFGCSFLRKCG*CCDEEI
Trigger: GATTTCCTCATCACAACAGCACCCACATTTACGTAA...AAAGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR GCA 90 bp AGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCATCTGGAATTTGTGTTTaGTTTGAAAACGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RFGRLLGAMNCPLKNLDASGICV*FENGPA
Trigger: TGCAGGACCGTTTTCAAAGCAAACACAAATTCCAGA...TGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR GCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAACCTCCCACTTTCTTTaGAGTTGTTCTGAACACTTA +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKTSHFL*SCSEHL
Trigger: TAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTACACCCACTATCATATaGACCAAACCAACAAACAAA +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFITPTII*TKPTNK
Trigger: TTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGT...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGACCAAATCTACTGAACTaGATCTCCATCTGGGCAACT +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRPNLLN*ISIWAT
Trigger: AGTTGCCCAGATGGAGATGCAGTTCAGTAGATTTGG...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCGGGCAGTATTTTTCCTaGTGGCGTACAACTGTTTAC +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPGQYFS*WRTTVY
Trigger: GTAAACAGTTGTACGCCAGCAGGAAAAATACTGCCC...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTAAAATGGCAGATTTCTaGCAGCAACTGTTTGACCAG +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAAKMADF*QQLFDQ
Trigger: CTGGTCAAACAGTTGCTGCCAGAAATCTGCCATTTT...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp CTTTGGGAAACACAACACTGGCCTCTGCTAAGTATTCATAAAGAATTCGTTGATCTGCTGCTTTACGTTTaGTGCTTTCAGCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: LWETQHWPLLSIHKEFVDLLLYV*CFQQNH
Trigger: ATGGTTTTGCTGAAAGCACCAAACGTAAAGCAGCAG...ATCAACGAATTCTTTATGAATACTTAGCAGAGGCCAGTGTTGTGTTTCCCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTGGGCCCCTGTTTTCTTaGATTACAAAGCAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSGPLFS*ITKQEL
Trigger: AAGCTCTTGCTTTGTAATCCAAGAAAACAGGGGCCC...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAGAACTGATGATGGCATaGAAGAACTTTTCAGTCATC +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTELMMA*KNFSVI
Trigger: GATGACTGAAAAGTTCTTCCATGCCATCATCAGTTC...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GAACTCTGTCAGACTGAGTCTCAAAACTTGCTTGGTCTCTTCACTAAAATGAAGGAACTGATGATGGCATaGAAGAACTTTTCAGTCATC +
Preference number: 4 (lower is better)
Translates to: ELCQTESQNLLGLFTKMKELMMA*KNFSVI
Trigger: GATGACTGAAAAGTTCTTCCATGCCATCATCAGTTC...CTTCATTTTAGTGAAGAGACCAAGCAAGTTTTGAGACTCAGTCTGACAGAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp ATAGATGGGTACATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCAAGATTGCTAGGCCCGGTATaGGTAAGGTCCACTACAATT +
Preference number: 4 (lower is better)
Translates to: IDGYICFSLMVIVISLSRLLGPV*VRSTTI
Trigger: AATTGTAGTGGACCTTACCCATACCGGGCCTAGCAA...TCTTGACAAGCTGATAACAATGACCATCAATGAAAAACAGATGTACCCATCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp AAGAATAGCAGTAACTCTTTGTCGTTTGGCATCATCATTATGCTTGCAAAAACGAGCTTGAGAGCATTGTaGAATACCTTCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: KNSSNSLSFGIIIMLAKTSLRAL*NTFRSS
Trigger: AGAGGACCTGAAGGTATTCCACAATGCTCTCAAGCT...CGTTTTTGCAAGCATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp CTTGTCAAGAATAGCAGTAACTCTTTGTCGTTTGGCATCATCATTATGCTTGCATCTGCTGAAGTTACTTaGACAGCAGTAGAACCAACT +
Preference number: 4 (lower is better)
Translates to: LVKNSSNSLSFGIIIMLASAEVT*TAVEPT
Trigger: AGTTGGTTCTACTGCTGTCCAAGTAACTTCAGCAGA...TGCAAGCATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTTGACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTTCTTGGTTGCAGGGATaGATTATATTGGAATGCAAA +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSSWLQG*IILECK
Trigger: TTTGCATTCCAATATAATCCATCCCTGCAACCAAGA...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTTCTTGGTTGCAGGGATaGATTATATTGGAATGCAAA +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFISWLQG*IILECK
Trigger: TTTGCATTCCAATATAATCCATCCCTGCAACCAAGA...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp CAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCTCTTGGTTGCAGGGATaGATTATATTGGAATGCAAA +
Preference number: 4 (lower is better)
Translates to: QVWQITWGNELPFKEFGCSWLQG*IILECK
Trigger: TTTGCATTCCAATATAATCCATCCCTGCAACCAAGA...GCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp CAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAACAAATTTGGATCTTaGCACAATGATAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: QVWQITWGNELPFKEFGCNKFGS*HNDNRV
Trigger: CACCCTGTTATCATTGTGCCAAGATCCAAATTTGTT...GCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp TGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTTAGATGTTTGGTATTGTaGTGGGGATTCTTCATGGTA +
Preference number: 4 (lower is better)
Translates to: WQITWGNELPFKEFGCSFRCLVL*WGFFMV
Trigger: TACCATGAAGAATCCCCACCACAATACCAAACATCT...AAAGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp AATATGAAGACTGATTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAAGGAGGGATTCTTCACTaGTTTCTTCATCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: NMKTDFQMKTGLADYLGQGGILH*FLHQFQ
Trigger: CTGGAATTGATGAAGAAACCAGTGAAGAATCCCTCC...TTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAATCAGTCTTCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTCAGAAATGGGCAACTTaGTCTAAACTTCAGAATTTC +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFIQKWAT*SKLQNF
Trigger: GAAATTCTGAAGTTTAGACCAAGTTGCCCATTTCTG...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTTCAATTACGCAGAAATaGGCAACTTGGTCTAAACTT +
Preference number: 4 (lower is better)
Translates to: KSSNETALQETPLSPRFISITQK*ATWSKL
Trigger: AAGTTTAGACCAAGTTGCCCATTTCTGCGTAATTGA...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACAGTATTTTTCCTGCTaGCGTACAACTGTTTACAGT +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTQYFSC*RTTVYS
Trigger: ACTGTAAACAGTTGTACGCCAGCAGGAAAAATACTG...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp GGTGCCAATTTCACTATAGATGGTATATGCGAGAGCCTTACCTTCCTGGCAAAAAATTACCAGTTGTCATaGTGCCAATTTCACTATAGA +
Preference number: 4 (lower is better)
Translates to: GANFTIDGICESLTFLAKNYQLS*CQFHYR
Trigger: TCTATAGTGAAATTGGCACCATGACAACTGGTAATT...TTTTGCCAGGAAGGTAAGGCTCTCGCATATACCATCTATAGTGAAATTGGCACC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTGATGGCATCTTATTCTaGGAATTCTGGACATCCAAC +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAADGILF*EFWTSN
Trigger: GTTGGATGTCCAGAATTCCCAGAATAAGATGCCATC...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTTTATTCAGTAGGGAGTaGCAAGTTGCCTACAGAACA +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAALFSRE*QVAYRT
Trigger: TGTTCTGTAGGCAACTTGCCACTCCCTACTGAATAA...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTCTCTGTCACTCATGGTaGAGTACAGTGATACAATCA +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAALCHSW*STVIQS
Trigger: TGATTGTATCACTGTACTCCACCATGAGTGACAGAG...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp ACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGATCTTGGCACAATTGTTGTGCTCAGTACTaGCTTTGGTATGTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: TLCTIPWIGFNKFGSWHNCCAQY*LWYVCS
Trigger: AGAACACACATACCAAAGTCAGTACTGAGCACAACA...ATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAGCACACGAACATACCTaGCCAGATTTAACATCATTG +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRAHEHT*PDLTSL
Trigger: CAATGATGTTAAATCTGGTCAGGTATGTTCGTGTGC...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TATCAGCTTGTCAAGAATAGCAGTAACTCTTTGTCGTTTGGCATCATCATTATGGCACACGAACATACCTaGCCAGATTTAACATCATTG +
Preference number: 4 (lower is better)
Translates to: YQLVKNSSNSLSFGIIIMAHEHT*PDLTSL
Trigger: CAATGATGTTAAATCTGGTCAGGTATGTTCGTGTGC...CATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTTGACAAGCTGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp GTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACTTATCTTTTTCATGTACCTaGTGCCTAGTCATAAATTCC +
Preference number: 4 (lower is better)
Translates to: VSSSIPGRYVSIKASRNLSFSCT*CLVINS
Trigger: GGAATTTATGACTAGGCATCAGGTACATGAAAAAGA...TAAGTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGATCCCAGGACAGTCTATaGAAACAAGCCTTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRSQDSL*KQAFCY
Trigger: GTAGCAAAAGGCTTGTTTTCATAGACTGTCCTGGGA...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp CTTTGGGAAACACAACACTGGCCTCTGCTAAGTATTCATAAAGAATTCGTTGATCCCCATATTTTTGCTTaGATAGATGGGTACATCTGT +
Preference number: 4 (lower is better)
Translates to: LWETQHWPLLSIHKEFVDPHIFA*IDGYIC
Trigger: ACAGATGTACCCATCTATTCAAGCAAAAATATGGGG...ATCAACGAATTCTTTATGAATACTTAGCAGAGGCCAGTGTTGTGTTTCCCAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACATCCAATAACCTTGCTTaGAACCAATTTCACATTTCC +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTSNNLA*NQFHIS
Trigger: GGAAATGTGAAATTGGTTTCAAGCAAGGTTATTGGA...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTACAAGTACACAGAGAGTaGATGATATTAATGACCAGT +
Preference number: 4 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLQVHRE*MILMTS
Trigger: ACTGGTCATTAATATCATTCACTCTCTGTGTACTTG...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGATGCTTTATCTGCCCATaGGACACTCGTTTGCTAATA +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRCFICP*DTRLLI
Trigger: TATTAGCAAACGAGTGTCTCATGGGCAGATAAAGCA...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAAATTTGTGTTTGCTTTaGAAACGGTCCTGCAAACCG +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRNLCLL*KRSCKP
Trigger: CGGTTTGCAGGACCGTTTTCAAAGCAAACACAAATT...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CTGATCACAAGGGAATTCCTAATGTTGGTGTCTTATATTGTTGCTCAAAGTCATAATTTGTGTTTGCTTTaGAAACGGTCCTGCAAACCG +
Preference number: 4 (lower is better)
Translates to: LITREFLMLVSYIVAQSHNLCLL*KRSCKP
Trigger: CGGTTTGCAGGACCGTTTTCAAAGCAAACACAAATT...ATGACTTTGAGCAACAATATAAGACACCAACATTAGGAATTCCCTTGTGATCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468273.1
CDS-3UTR TCA 90 bp TTTGGATCTTGGCACAATGATAACAGGGTGTTGATCTTAGAGTCCAACAAATTAAATTTGTGTTTGCTTTaGAAACGGTCCTGCAAACCG +
Preference number: 4 (lower is better)
Translates to: FGSWHNDNRVLILESNKLNLCLL*KRSCKP
Trigger: CGGTTTGCAGGACCGTTTTCAAAGCAAACACAAATT...TAATTTGTTGGACTCTAAGATCAACACCCTGTTATCATTGTGCCAAGATCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR TCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCAGTTAAAAGTTTCCTaGCCTCCCACTTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPQLKVS*PPTFFA
Trigger: TGCAAAGAAAGTGGGAGGTCAGGAAACTTTTAACTG...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTATCCACTATAAAATATaGAATTTCCCTGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSIHYKI*NFPALP
Trigger: GGGGAGGGCAGGGAAATTTCATATTTTATAGTGGAT...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACCAGTCTTTTCACAGTaGTTAAATGCAATTCTAGCA +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKPVFSQ*LNAILA
Trigger: TGCTAGAATTGCATTTAATCACTGTGAAAAGACTGG...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTGGACAAAAACATGACTaGGTTCCTGGTTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSGQKHD*VPGFLF
Trigger: AAAGAGGAAACCAGGAACTCAGTCATGTTTTTGTCC...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTAGGCCAACCAAGAAGCTaGCCCAGACTATTTTTAATA +
Preference number: 4 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLGQPRS*PRLFLI
Trigger: TATTAAAAATAGTCTGGGTCAGCTTCTTGGTTGGCC...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp TATCAGCTTGTCAAGAATAGCAGTAACTCTTTGTCGTTTGGCATCATCATTATGTTGGCAGATGCTTTGTaGTACCTTTCACAATGTTGG +
Preference number: 4 (lower is better)
Translates to: YQLVKNSSNSLSFGIIIMLADAL*YLSQCW
Trigger: CCAACATTGTGAAAGGTATCACAAAGCATCTGCCAA...CATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTTGACAAGCTGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAATTGTGTCCTTTGGTTaGCCAGCAAGACATTTTTCC +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRIVSFG*PARHFS
Trigger: GGAAAAATGTCTTGCTGGGCAACCAAAGGACACAAT...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp AACAAATTTGGATCTTGGCACAATGATAACAGGGTGTTGATCTTAGAGTCCAACAATGCGACTAAAGACTaGATTGAAGTTGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: NKFGSWHNDNRVLILESNNATKD*IEVVAA
Trigger: AGCTGCAACAACTTCAATGCAGTCTTTAGTCGCATT...GTTGGACTCTAAGATCAACACCCTGTTATCATTGTGCCAAGATCCAAATTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAGGCTTTAAATTTAAATaGTGTTTCCTTCAGGAGTCG +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTGFKFK*CFLQES
Trigger: CGACTCCTGAAGGAAACAGCATTTAAATTTAAAGCC...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAGGCTTTAAATTTAAATaGTGTTTCCTTCAGGAGTCG +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQGFKFK*CFLQES
Trigger: CGACTCCTGAAGGAAACAGCATTTAAATTTAAAGCC...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR GCA 90 bp ATAAATCATTCAGCTGATTCTGAACATCTCCATCTACAGGCAAACCATGAAGGATTTATAACTGCTAACTaGGCAACCTTCTTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: INHSADSEHLHLQANHEGFITAN*ATFFRA
Trigger: AGCCCTAAAGAAGGTTGCGCAGTTAGCAGTTATAAA...TCCTTCATGGTTTGCCTGTAGATGGAGATGTTCAGAATCAGCTGAATGATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR GCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAATACCCAGTTCCAAAATaGCTTTTCCAGGCTATTTAT +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKYPVPK*LFQAIY
Trigger: ATAAATAGCCTGGAAAAGGCATTTTGGAACTGGGTA...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATACCCAGTTCCAAAATaGCTTTTCCAGGCTATTTAT +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQYPVPK*LFQAIY
Trigger: ATAAATAGCCTGGAAAAGGCATTTTGGAACTGGGTA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR GCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTACTGCTTTACGTTTGGTaGTTTCAGCAAAACCATCCA +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLLLYVW*FQQNHP
Trigger: TGGATGGTTTTGCTGAAAGCACCAAACGTAAAGCAG...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCTCCACAACCTTGCACTaGTTTATGAAGTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPSTTLH*FMKCFT
Trigger: GGTGAAACACTTCATAAAGCAGTGCAAGGTTGTGGA...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGATCCACAACCTTGCACTaGTTTATGAAGTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRSTTLH*FMKCFT
Trigger: GGTGAAACACTTCATAAAGCAGTGCAAGGTTGTGGA...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCACAGGAACTTCTATCTaGCTGCTTATTTTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRTGTSI*LLIFKK
Trigger: CTTCTTAAAAATAAGCAGGCAGATAGAAGTTCCTGT...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAGAAAAACCTGCGTGCTaGATCAAAGTTGCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRREKPAC*IKVAFH
Trigger: GTGAAAAGCAACTTTGATGCAGCACGCAGGTTTTTC...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTACTTTATGATCCCTGTTaGTGGAAAGATACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLLYDPC*WKDTAQ
Trigger: TTGGGCAGTATCTTTCCAGCAACAGGGATCATAAAG...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp TGGCCTCTGCTAAGTATTCATAAAGAATTCGTTGATCAAACTCATCTGTGGTATCTTTATGATCCCTGTTaGTGGAAAGATACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: WPLLSIHKEFVDQTHLWYLYDPC*WKDTAQ
Trigger: TTGGGCAGTATCTTTCCAGCAACAGGGATCATAAAG...ATACCACAGATGAGTTTGATCAACGAATTCTTTATGAATACTTAGCAGAGGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp TCATTGAATATACGGAGACTATCTAAAGTATGCAGGTTTTGTTCAAGAAGTGCGGTTATAGATATAGACTaGGGAGACGTTGTCGTAAGC +
Preference number: 4 (lower is better)
Translates to: SLNIRRLSKVCRFCSRSAVIDID*GDVVVS
Trigger: GCTTACGACAACGTCTCCGCAGTCTATATCTATAAC...CGCACTTCTTGAACAAAACCTGCATACTTTAGATAGTCTCCGTATATTCAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAGTGTGGCTCATTGGCTaGCAGTGTCTTACTAATAGA +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRVWLIG*QCLTNR
Trigger: TCTATTAGTAAGACACTGGCAGCCAATGAGCCACAC...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCTTGGCATCATCATTATaGTTGCAAAAACGAACTAGA +
Preference number: 4 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRLASSL*LQKRTR
Trigger: TCTAGTTCGTTTTTGCAAGCATAATGATGATGCCAA...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ACAATTCCATGGATTGGATTTAACAAATTTGGATCTTGGCACAATGATAACAGGAGCAGATCTGTAATCTaGCCAAGGCTTCCCCATATT +
Preference number: 4 (lower is better)
Translates to: TIPWIGFNKFGSWHNDNRSRSVI*PRLPHI
Trigger: AATATGGGGAAGCCTTGGGCAGATTACAGATCTGCT...CCTGTTATCATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp CATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCAAGAATAGCAGTAACTCCCAAGCCACCTGTTaGACTGGTTTTGATGAAACT +
Preference number: 4 (lower is better)
Translates to: HLFFIDGHCYQLVKNSSNSQATC*TGFDET
Trigger: AGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGA...GTTACTGCTATTCTTGACAAGCTGATAACAATGACCATCAATGAAAAACAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR GCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCAGCTACAGCAGTATCTaGCATCACCTCAGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPSYSSI*HHLSFY
Trigger: ATAAAAGCTGAGGTGATGGCAGATACTGCTGTAGCT...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GATGGGTACATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCAAGAATAGTAGGGAAGATGAGCTaGCACATCAAGGGAATTGTT +
Preference number: 4 (lower is better)
Translates to: DGYICFSLMVIVISLSRIVGKMS*HIKGIV
Trigger: AACAATTCCCTTGATGTGGCAGCTCATCTTCCCTAC...TATTCTTGACAAGCTGATAACAATGACCATCAATGAAAAACAGATGTACCCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR GCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAAATGATCCATTTGCTTaGAGTGCCACTCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRNDPFA*SATPED
Trigger: ATCCTCTGGAGTGGCACTGCAAGCAAATGGATCATT...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp ACAATTCCATGGATTGGATTTAACAAATTTGGATCTTGGCACAATGATAACAGGAATGATCCATTTGCTTaGAGTGCCACTCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: TIPWIGFNKFGSWHNDNRNDPFA*SATPED
Trigger: ATCCTCTGGAGTGGCACTGCAAGCAAATGGATCATT...CCTGTTATCATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR GCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTAATAGCAGGTGAAGGATaGCTGTACCCTTTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLIAGEG*LYPFKR
Trigger: CCTTTTAAAAGGGTACAGGCATCCTTCACCTGCTAT...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAATAGCAGGTGAAGGATaGCTGTACCCTTTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRIAGEG*LYPFKR
Trigger: CCTTTTAAAAGGGTACAGGCATCCTTCACCTGCTAT...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp AATATGAAGACTGATTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATTCTATGTTTTAGGCTaGAGCGACTTCGAACTTCTT +
Preference number: 4 (lower is better)
Translates to: NMKTDFQMKTGLADYLGQFYVLG*SDFELL
Trigger: AAGAAGTTCGAAGTCGCTGCAGCCTAAAACATAGAA...TTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAATCAGTCTTCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR GCA 90 bp CTTTGGGAAACACAACACTGGCCTCTGCTAAGTATTCATAAAGAATTCGTTGATTTCTATGTTTTAGGCTaGAGCGACTTCGAACTTCTT +
Preference number: 4 (lower is better)
Translates to: LWETQHWPLLSIHKEFVDFYVLG*SDFELL
Trigger: AAGAAGTTCGAAGTCGCTGCAGCCTAAAACATAGAA...ATCAACGAATTCTTTATGAATACTTAGCAGAGGCCAGTGTTGTGTTTCCCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR GCA 90 bp TTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTTCATAATCAGTTTCTaGTACTCTCCTCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: FGRLLGAMNCPLKNLDAAFIISF*YSPHFG
Trigger: CCCAAAATGAGGAGAGTAGCAGAAACTGATTATGAA...AGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR GCA 90 bp TTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCATCATTCATAATCAGTTTCTaGTACTCTCCTCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: LKPISHFQKPKLQQYLPSFIISF*YSPHFG
Trigger: CCCAAAATGAGGAGAGTAGCAGAAACTGATTATGAA...TGATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp GGTGTTGATCTTAGAGTCCAACAAATTATGCACAACAGGAAAGACTTTGGGAAATCTGGAATTTGTGTTTaGTTTGAAAACGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GVDLRVQQIMHNRKDFGKSGICV*FENGPA
Trigger: TGCAGGACCGTTTTCAAAGCAAACACAAATTCCAGA...TTTCCCAAAGTCTTTCCTGTTGTGCATAATTTGTTGGACTCTAAGATCAACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR GCA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTAAGTCAAAGGTATTTTTaGATTTCAAAGGCGGCTGAA +
Preference number: 4 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLSQRYF*ISKAAE
Trigger: TTCAGCCGCCTTTGAAATGCAAAAATACCTTTGACT...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTATTTAAAGAATTTGGATaGAGCTTTGTCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLFKEFG*SFVRGC
Trigger: ACAGCCTCTGACAAAGCTGCATCCAAATTCTTTAAA...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422121.2
ENST00000471572.6
CDS-3UTR GCA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTACTTGGGGCAATGAATTaGCCTTTAAAGAATTTGGAT +
Preference number: 4 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLLGAMN*PLKNLD
Trigger: ATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAG...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422121.2
ENST00000471572.6
CDS-3UTR CCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGATCTCATTGTGTCCTTTaGTTGCCCAGCAAGACATTT +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRSHCVL*LPSKTF
Trigger: AAATGTCTTGCTGGGCAACCAAAGGACACAATGAGA...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTATCTCATTGTGTCCTTTaGTTGCCCAGCAAGACATTT +
Preference number: 4 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLSHCVL*LPSKTF
Trigger: AAATGTCTTGCTGGGCAACCAAAGGACACAATGAGA...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATCAGTCTGTGGGATCTaGTACAGTTTTGTAAATTCA +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQSVCGI*YSFVNS
Trigger: TGAATTTACAAAACTGTACCAGATCCCACAGACTGA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CCA 90 bp GATGGTATATGCGAGAGCCTTACCTTCCTGGCAAAATTCTTTGAAAACTGTTCTTCAGTCTGTGGGATCTaGTACAGTTTTGTAAATTCA +
Preference number: 4 (lower is better)
Translates to: DGICESLTFLAKFFENCSSVCGI*YSFVNS
Trigger: TGAATTTACAAAACTGTACCAGATCCCACAGACTGA...AGAACAGTTTTCAAAGAATTTTGCCAGGAAGGTAAGGCTCTCGCATATACCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTAAGCCATATCAGTCTGTaGGATCTGGTACAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLSHISL*DLVQFC
Trigger: ACAAAACTGTACCAGATCCCACAGACTGATATGGCT...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCAGCCATATCAGTCTGTaGGATCTGGTACAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPSHISL*DLVQFC
Trigger: ACAAAACTGTACCAGATCCCACAGACTGATATGGCT...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTATCCTGGATTATTTCTaGACACAAGATAAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSILDYF*TQDKEN
Trigger: ATTCTCCTTATCTTGTGTCCAGAAATAATCCAGGAT...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp AGTTGTCATGGTGCCAATTTCACTATAGATGGTATATGCGAGAGCCTTACCTTCCATCAACCACGTCTTTaGATATATCCTGGATTATTT +
Preference number: 4 (lower is better)
Translates to: SCHGANFTIDGICESLTFHQPRL*IYPGLF
Trigger: AAATAATCCAGGATATATCCAAAGACGTGGTTGATG...GAAGGTAAGGCTCTCGCATATACCATCTATAGTGAAATTGGCACCATGACAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTGAACTGATGATGGCATaGAAGAACTTTTCAGTCATC +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAAELMMA*KNFSVI
Trigger: GATGACTGAAAAGTTCTTCCATGCCATCATCAGTTC...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp CTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGATCTTGGCACAATGATATGGTTAAGGTGAACTaGTTCTCATCTACTAGGCAG +
Preference number: 4 (lower is better)
Translates to: LCTIPWIGFNKFGSWHNDMVKVN*FSSTRQ
Trigger: CTGCCTAGTAGATGAGAACCAGTTCACCTTAACCAT...ATCATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGATGTCTCTAGTAACTaGCCCTCGATTTTTAAATTA +
Preference number: 4 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEDVSSN*PSIFKL
Trigger: TAATTTAAAAATCGAGGGCCAGTTACTAGAGACATC...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAATCTTGGTTGCAGGGATaGATTATATTGGAATGCAAA +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKSWLQG*IILECK
Trigger: TTTGCATTCCAATATAATCCATCCCTGCAACCAAGA...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTATGGGAAACACAACACTaGCCTCTGCTAAGTATTCAT +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLWETQH*PLLSIH
Trigger: ATGAATACTTAGCAGAGGCCAGTGTTGTGTTTCCCA...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp TGGCCTCTGCTAAGTATTCATAAAGAATTCGTTGATCAAACTCATCTGTGGTATTGGGAAACACAACACTaGCCTCTGCTAAGTATTCAT +
Preference number: 4 (lower is better)
Translates to: WPLLSIHKEFVDQTHLWYWETQH*PLLSIH
Trigger: ATGAATACTTAGCAGAGGCCAGTGTTGTGTTTCCCA...ATACCACAGATGAGTTTGATCAACGAATTCTTTATGAATACTTAGCAGAGGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CCA 90 bp GATGGGTACATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCAAGAATACAACAGGAAAGACTTTaGGAAACACAACACTGGCCT +
Preference number: 4 (lower is better)
Translates to: DGYICFSLMVIVISLSRIQQERL*ETQHWP
Trigger: AGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTG...TATTCTTGACAAGCTGATAACAATGACCATCAATGAAAAACAGATGTACCCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp ACAATTCCATGGATTGGATTTAACAAATTTGGATCTTGGCACAATGATAACAGGCAACAGGAAAGACTTTaGGAAACACAACACTGGCCT +
Preference number: 4 (lower is better)
Translates to: TIPWIGFNKFGSWHNDNRQQERL*ETQHWP
Trigger: AGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTG...CCTGTTATCATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CCA 90 bp AGGAGCAAAATTTGCTATAAACTGATCACAAGGGAATTCCTAATGTTGGTGTCTTGTTTGGTATTGTGGTaGGGATTCTTCATGGTACAC +
Preference number: 4 (lower is better)
Translates to: RSKICYKLITREFLMLVSCLVLW*GFFMVH
Trigger: GTGTACCATGAAGAATCCCCACCACAATACCAAACA...AGACACCAACATTAGGAATTCCCTTGTGATCAGTTTATAGCAAATTTTGCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468273.1
CDS-3UTR CCA 90 bp TTTGGATCTTGGCACAATGATAACAGGGTGTTGATCTTAGAGTCCAACAAATTATGTTTGGTATTGTGGTaGGGATTCTTCATGGTACAC +
Preference number: 4 (lower is better)
Translates to: FGSWHNDNRVLILESNKLCLVLW*GFFMVH
Trigger: GTGTACCATGAAGAATCCCCACCACAATACCAAACA...TAATTTGTTGGACTCTAAGATCAACACCCTGTTATCATTGTGCCAAGATCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CCA 90 bp GGTGTTGATCTTAGAGTCCAACAAATTATGCACAACAGGAAAGACTTTGGGAAAAGATGTTTGGTATTGTaGTGGGGATTCTTCATGGTA +
Preference number: 4 (lower is better)
Translates to: GVDLRVQQIMHNRKDFGKRCLVL*WGFFMV
Trigger: TACCATGAAGAATCCCCACCACAATACCAAACATCT...TTTCCCAAAGTCTTTCCTGTTGTGCATAATTTGTTGGACTCTAAGATCAACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CCA 90 bp CTGATCACAAGGGAATTCCTAATGTTGGTGTCTTATATTGTTGCTCAAAGTCATGGAGGGATTCTTCACTaGTTTCTTCATCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: LITREFLMLVSYIVAQSHGGILH*FLHQFQ
Trigger: CTGGAATTGATGAAGAAACCAGTGAAGAATCCCTCC...ATGACTTTGAGCAACAATATAAGACACCAACATTAGGAATTCCCTTGTGATCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468273.1
CDS-3UTR CCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTATGGCATCCTTGGCACTaGGTTACTGATCTATTTCTA +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLWHPWH*VTDLFL
Trigger: TAGAAATAGATCAGTAACCCAGTGCCAAGGATGCCA...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACATCAATTACGCAGAAATaGGCAACTTGGTCTAAACTT +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTSITQK*ATWSKL
Trigger: AAGTTTAGACCAAGTTGCCCATTTCTGCGTAATTGA...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTTTATTCTGGGAATTCTaGACATCCAACACCATAACC +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAALFWEF*TSNTIT
Trigger: GGTTATGGTGTTGGATGTCCAGAATTCCCAGAATAA...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTAAACACTGTCATCTCTaGGAAAAGAAACCACTCACA +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAAKHCHL*EKKPLT
Trigger: TGTGAGTGGTTTCTTTTCCCAGAGATGACAGTGTTT...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR CAA 72 bp TGGCATCATCATTATGCTTGCAAAAACGAACTAGATTaGACAGCCATGGAGTCATGTATTCCAAACAAAGGT +
Preference number: 4 (lower is better)
Translates to: WHHHYACKNELD*TAMESCIPNKG
Trigger: ACCTTTGTTTGGAATACATGACTCCATGGCTGTCAAATCTAGTTCGTTTTTGCAAGCATAATGATGATGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR CAA 72 bp CTTCATGGTACACCACACTCTGCACAATTCCATGGATaGGATTTAACAAATTTGGATCTTGGCACAATGATA +
Preference number: 4 (lower is better)
Translates to: LHGTPHSAQFHG*DLTNLDLGTMI
Trigger: TATCATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCATGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
3UTR CAA 72 bp AGTGTCTTACTAATAGAGACAATAAAGAGGGTGTTGTaGGCAGGGATACATAAACCTGATGTCTCTAGTAAC +
Preference number: 4 (lower is better)
Translates to: SVLLIETIKRVL*AGIHKPDVSSN
Trigger: GTTACTAGAGACATCAGGTTTATGTATCCCTGCCAACAACACCCTCTTTATTGTCTCTATTAGTAAGACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
3UTR CAA 72 bp TTTGCTAATACACCCAAAGACAACAAGAGCTCTTGGTaGCAGGGATGGATTATATTGGAATGCAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: FANTPKDNKSSW*QGWIILECKSL
Trigger: CAAAGATTTGCATTCCAATATAATCCATCCCTGCAACCAAGAGCTCTTGTTGTCTTTGGGTGTATTAGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCCTTGCACTGCTTTATaGAGTGTTTCACCAAACATA +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPPCTAL*SVSPNI
Trigger: TATGTTTGGTGAAACACTTCATAAAGCAGTGCAAGG...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGACCTTGCACTGCTTTATaGAGTGTTTCACCAAACATA +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRPCTAL*SVSPNI
Trigger: TATGTTTGGTGAAACACTTCATAAAGCAGTGCAAGG...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTACCTTGCACTGCTTTATaGAGTGTTTCACCAAACATA +
Preference number: 4 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLPCTAL*SVSPNI
Trigger: TATGTTTGGTGAAACACTTCATAAAGCAGTGCAAGG...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR TCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCTTGCAATGGTTAAGGTaGACTGGTTCTCATCTACTA +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPLQWLR*TGSHLL
Trigger: TAGTAGATGAGAACCAGTTCACCTTAACCATTGCAA...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp AAGAATAGCAGTAACTCTTTGTCGTTTGGCATCATCATTATGCTTGCAAAAACGCCCCATATTTTTGCTTaGATAGATGGGTACATCTGT +
Preference number: 4 (lower is better)
Translates to: KNSSNSLSFGIIIMLAKTPHIFA*IDGYIC
Trigger: ACAGATGTACCCATCTATTCAAGCAAAAATATGGGG...CGTTTTTGCAAGCATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR TCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCGTCTCTTCACTAAAATaGAGCTGTGAACAAGTACAC +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPVSSLK*SCEQVH
Trigger: GTGTACTTGTTCACAGCTTCATTTTAGTGAAGAGAC...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp TTTGGATCTTGGCACAATGATAACAGGGTGTTGATCTTAGAGTCCAACAAATTAGTCTCTTCACTAAAATaGAGCTGTGAACAAGTACAC +
Preference number: 4 (lower is better)
Translates to: FGSWHNDNRVLILESNKLVSSLK*SCEQVH
Trigger: GTGTACTTGTTCACAGCTTCATTTTAGTGAAGAGAC...TAATTTGTTGGACTCTAAGATCAACACCCTGTTATCATTGTGCCAAGATCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp ATCTTCGGATCAGTAAGTACTTCTTCATCCAAGAGAACATTTGATTCAGACACTCTGGACTCTTGTCATTaGATATACGGAGACTATCTA +
Preference number: 4 (lower is better)
Translates to: IFGSVSTSSSKRTFDSDTLDSCH*IYGDYL
Trigger: TAGATAGTCTCCGTATATTCAATGACAAGAGTCCAG...AGTGTCTGAATCAAATGTTCTCTTGGATGAAGAAGTACTTACTGATCCGAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR TCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCAGGAGCCTTTGTGTCTaGTATCAAGTGATCAAAACT +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPRSLCV*YQVIKT
Trigger: AGTTTTGATCACTTGATATCAGACACAAAGGCTCCT...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGGAGCCTTTGTGTCTaGTATCAAGTGATCAAAACT +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSRSLCV*YQVIKT
Trigger: AGTTTTGATCACTTGATATCAGACACAAAGGCTCCT...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAAGGAGCCTTTGTGTCTaGTATCAAGTGATCAAAACT +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRRSLCV*YQVIKT
Trigger: AGTTTTGATCACTTGATATCAGACACAAAGGCTCCT...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAAATTTGTGTTTGCTTTaGAAACGGTCCTGCAAACCG +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRNLCLL*KRSCKP
Trigger: CGGTTTGCAGGACCGTTTTCAAAGCAAACACAAATT...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTTTGGCACTGGGTTACTaGTCTATTTCTAAACACAGT +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSLALGY*SISKHS
Trigger: ACTGTGTTTAGAAATAGATCAGTAACCCAGTGCCAA...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTACATTTCAAAGGCGGCTaGATTTTGATTTGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLHFKGG*ILICAN
Trigger: ATTGGCACAAATCAAAATTCAGCCGCCTTTGAAATG...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTAAATGCGACTAAAGACTaGATTGAAGTTGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLNATKD*IEVVAA
Trigger: AGCTGCAACAACTTCAATGCAGTCTTTAGTCGCATT...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp ATAAATCATTCAGCTGATTCTGAACATCTCCATCTACAGGCAAACCATGAAGGATACCCAGTTCCAAAATaGCTTTTCCAGGCTATTTAT +
Preference number: 4 (lower is better)
Translates to: INHSADSEHLHLQANHEGYPVPK*LFQAIY
Trigger: ATAAATAGCCTGGAAAAGGCATTTTGGAACTGGGTA...TCCTTCATGGTTTGCCTGTAGATGGAGATGTTCAGAATCAGCTGAATGATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR GCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAACAGGAACTTCTATCTaGCTGCTTATTTTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKTGTSI*LLIFKK
Trigger: CTTCTTAAAAATAAGCAGGCAGATAGAAGTTCCTGT...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ACAATTCCATGGATTGGATTTAACAAATTTGGATCTTGGCACAATGATAACAGGGAAAAACCTGCGTGCTaGATCAAAGTTGCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: TIPWIGFNKFGSWHNDNREKPAC*IKVAFH
Trigger: GTGAAAAGCAACTTTGATGCAGCACGCAGGTTTTTC...CCTGTTATCATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTGTATGCAAGAAGTGTTaGCATCTTATCAAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSVCKKC*HLIKRS
Trigger: CGACCTTTTGATAAGATGGCAACACTTCTTGCATAC...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTTGGATCTTGGCACAATGATAACAGGGTGTTGATCTTAGAGTCCAACAAATTAGTATGCAAGAAGTGTTaGCATCTTATCAAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: FGSWHNDNRVLILESNKLVCKKC*HLIKRS
Trigger: CGACCTTTTGATAAGATGGCAACACTTCTTGCATAC...TAATTTGTTGGACTCTAAGATCAACACCCTGTTATCATTGTGCCAAGATCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAATTGGCATCATCATTATaGTTGCAAAAACGAACTAGA +
Preference number: 4 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKLASSL*LQKRTR
Trigger: TCTAGTTCGTTTTTGCAAGCATAATGATGATGCCAA...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCATCATTGGCATCATCATTATaGTTGCAAAAACGAACTAGA +
Preference number: 4 (lower is better)
Translates to: LKPISHFQKPKLQQYLPSLASSL*LQKRTR
Trigger: TCTAGTTCGTTTTTGCAAGCATAATGATGATGCCAA...TGATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR GCA 90 bp CTTTGGGAAACACAACACTGGCCTCTGCTAAGTATTCATAAAGAATTCGTTGATGCTTCCCCATATTTTTaGTTGAATAGATGGGTACAT +
Preference number: 4 (lower is better)
Translates to: LWETQHWPLLSIHKEFVDASPYF*LNRWVH
Trigger: ATGTACCCATCTATTCAAGCAAAAATATGGGGAAGC...ATCAACGAATTCTTTATGAATACTTAGCAGAGGCCAGTGTTGTGTTTCCCAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp GATGGGTACATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCAAGAATAAGCTACAGCAGTATCTaGCATCACCTCAGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: DGYICFSLMVIVISLSRISYSSI*HHLSFY
Trigger: ATAAAAGCTGAGGTGATGGCAGATACTGCTGTAGCT...TATTCTTGACAAGCTGATAACAATGACCATCAATGAAAAACAGATGTACCCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR GCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTTTCTATGTTTTAGGCTaGAGCGACTTCGAACTTCTT +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSFYVLG*SDFELL
Trigger: AAGAAGTTCGAAGTCGCTGCAGCCTAAAACATAGAA...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGATTACGTAAATGTGGGTaGTGTTGTGATGAGGAAATC +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRLRKCG*CCDEEI
Trigger: GATTTCCTCATCACAACAGCACCCACATTTACGTAA...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ACTGATCACAAGGGAATTCCTAATGTTGGTGTCTTATATTGTTGCTCAAAGTCATCTGGAATTTGTGTTTaGTTTGAAAACGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TDHKGIPNVGVLYCCSKSSGICV*FENGPA
Trigger: TGCAGGACCGTTTTCAAAGCAAACACAAATTCCAGA...TGACTTTGAGCAACAATATAAGACACCAACATTAGGAATTCCCTTGTGATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468273.1
CDS-3UTR GCA 90 bp CTGGATACACTCTCTTCTTGTTGGCATCTTGATCAGAATTGTATTAAGCCAGTTTTTAAAGAATTTGGATaGAGCTTTGTCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LDTLSSCWHLDQNCIKPVFKEFG*SFVRGC
Trigger: ACAGCCTCTGACAAAGCTGCATCCAAATTCTTTAAA...AACTGGCTTAATACAATTCTGATCAAGATGCCAACAAGAAGAGAGTGTATCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422121.2
CDS-3UTR GCA 90 bp CTGGATACACTCTCTTCTTGTTGGCATCTTGATCAGAATTGTATTAAGCCAGTTCTTGGGGCAATGAATTaGCCTTTAAAGAATTTGGAT +
Preference number: 4 (lower is better)
Translates to: LDTLSSCWHLDQNCIKPVLGAMN*PLKNLD
Trigger: ATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAG...AACTGGCTTAATACAATTCTGATCAAGATGCCAACAAGAAGAGAGTGTATCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422121.2
CDS-3UTR GCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTAAATAACAACACAGCATaGTGTCTCTGCTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLNNNTA*CLCSST
Trigger: TGTTGAAGAGCAGAGACAGCATGCTGTGTTGTTATT...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp AAGCATGTCTTGTCAATTATTTTGCACATCCTTCCAATAACCTTGCTTGAAACCCTATTCCTTGGCAGATaGTTTGTGATACCTTTCACA +
Preference number: 4 (lower is better)
Translates to: KHVLSIILHILPITLLETLFLGR*FVIPFT
Trigger: TGTGAAAGGTATCACAAAGCATCTGCCAAGGAATAG...GGTTTCAAGCAAGGTTATTGGAAGGATGTGCAAAATAATTGACAAGACATGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp TTCTACAAAGTAATAAATCATTCAGCTGATTCTGAACATCTCCATCTACAGGCATCTCATTGTGTCCTTTaGTTGCCCAGCAAGACATTT +
Preference number: 4 (lower is better)
Translates to: FYKVINHSADSEHLHLQASHCVL*LPSKTF
Trigger: AAATGTCTTGCTGGGCAACCAAAGGACACAATGAGA...TGCCTGTAGATGGAGATGTTCAGAATCAGCTGAATGATTTATTACTTTGTAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CCA 90 bp TTCTACAAAGTAATAAATCATTCAGCTGATTCTGAACATCTCCATCTACAGGCAAAAATGGCAGATTTCTaGCAGCAACTGTTTGACCAG +
Preference number: 4 (lower is better)
Translates to: FYKVINHSADSEHLHLQAKMADF*QQLFDQ
Trigger: CTGGTCAAACAGTTGCTGCCAGAAATCTGCCATTTT...TGCCTGTAGATGGAGATGTTCAGAATCAGCTGAATGATTTATTACTTTGTAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAATCCTGGATTATTTCTaGACACAAGATAAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQILDYF*TQDKEN
Trigger: ATTCTCCTTATCTTGTGTCCAGAAATAATCCAGGAT...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAACATCAACCACGTCTTTaGATATATCCTGGATTATTT +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQHQPRL*IYPGLF
Trigger: AAATAATCCAGGATATATCCAAAGACGTGGTTGATG...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCTTATTCAGTAGGGAGTaGCAAGTTGCCTGGTATAAA +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPLFSRE*QVAWYK
Trigger: TTTATACCAGGCAACTTGCCACTCCCTACTGAATAA...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358273.9
CDS-3UTR CCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGATCTGCTGAAGTTACTTaGACAGCAGTAGAACCAACT +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRSAEVT*TAVEPT
Trigger: AGTTGGTTCTACTGCTGTCCAAGTAACTTCAGCAGA...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAGATGTCTCTAGTAACTaGCCCTCGATTTTTAAATTA +
Preference number: 4 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTDVSSN*PSIFKL
Trigger: TAATTTAAAAATCGAGGGCCAGTTACTAGAGACATC...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGATGGGAAACACAACACTaGCCTCTGCTAAGTATTCAT +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRWETQH*PLLSIH
Trigger: ATGAATACTTAGCAGAGGCCAGTGTTGTGTTTCCCA...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp CATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCAAGAATAGCAGTAACTGGGAAACACAACACTaGCCTCTGCTAAGTATTCAT +
Preference number: 4 (lower is better)
Translates to: HLFFIDGHCYQLVKNSSNWETQH*PLLSIH
Trigger: ATGAATACTTAGCAGAGGCCAGTGTTGTGTTTCCCA...GTTACTGCTATTCTTGACAAGCTGATAACAATGACCATCAATGAAAAACAGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CCA 90 bp TCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACTTAACAATAAACAAATTTGGATCTTaGCACAATGATAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: SSIPGRYVSIKASRNLTINKFGS*HNDNRV
Trigger: CACCCTGTTATCATTGTGCCAAGATCCAAATTTGTT...TATTGTTAAGTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGATGTTTGGTATTGTGGTaGGGATTCTTCATGGTACAC +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRCLVLW*GFFMVH
Trigger: GTGTACCATGAAGAATCCCCACCACAATACCAAACA...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp AGGAGCAAAATTTGCTATAAACTGATCACAAGGGAATTCCTAATGTTGGTGTCTAGATGTTTGGTATTGTaGTGGGGATTCTTCATGGTA +
Preference number: 4 (lower is better)
Translates to: RSKICYKLITREFLMLVSRCLVL*WGFFMV
Trigger: TACCATGAAGAATCCCCACCACAATACCAAACATCT...AGACACCAACATTAGGAATTCCCTTGTGATCAGTTTATAGCAAATTTTGCTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468273.1
CDS-3UTR CCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTAACATGGCAAACCGGATaGGTTCATTATAAAACAGGA +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLTWQTG*VHYKTG
Trigger: TCCTGTTTTATAATGAACCCATCCGGTTTGCCATGT...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTACATGGCAAACCGGATaGGTTCATTATAAAACAGGA +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSTWQTG*VHYKTG
Trigger: TCCTGTTTTATAATGAACCCATCCGGTTTGCCATGT...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATTTCCTTCAAGAACATaGAATTCATTTTCCCCTTAC +
Preference number: 4 (lower is better)
Translates to: HTISRNDIYLLLTETTHQFPSRT*NSFSPY
Trigger: GTAAGGGGAAAATGAATTCCATGTTCTTGAAGGAAA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CCA 90 bp ATAAATCATTCAGCTGATTCTGAACATCTCCATCTACAGGCAAACCATGAAGGACAATTTCACTATAGATaGTATATGCGAGAGCCTTAC +
Preference number: 4 (lower is better)
Translates to: INHSADSEHLHLQANHEGQFHYR*YMREPY
Trigger: GTAAGGCTCTCGCATATACCATCTATAGTGAAATTG...TCCTTCATGGTTTGCCTGTAGATGGAGATGTTCAGAATCAGCTGAATGATTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTACCCACAAATTGCCTTTaGGATAAATCAAACCAAAGG +
Preference number: 4 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLPTNCL*DKSNQR
Trigger: CCTTTGGTTTGATTTATCCCAAAGGCAATTTGTGGG...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
3UTR CAA 72 bp ATCAGCTTGTCAAGAATAGCAGTAACTCTTTGTCGTTaGGCATCATCATTATGCTTGCAAAAACGAACTAGA +
Preference number: 4 (lower is better)
Translates to: ISLSRIAVTLCR*ASSLCLQKRTR
Trigger: TCTAGTTCGTTTTTGCAAGCATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTTGACAAGCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR CAA 72 bp CATTGTTATCAGCTTGTCAAGAATAGCAGTAACTCTTaGTCGTTTGGCATCATCATTATGCTTGCAAAAACG +
Preference number: 4 (lower is better)
Translates to: HCYQLVKNSSNS*SFGIIIMLAKT
Trigger: CGTTTTTGCAAGCATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTTGACAAGCTGATAACAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR TCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAAAATCACCATTGATTTaGCCAGTTTTGAACCTCCGT +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRKSPLI*PVLNLR
Trigger: ACGGAGGTTCAAAACTGGTCAAATCAATGGTGATTT...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp TTTGACAGCCATGGAGTCATGTATTCCAAACAAAGGTGTTTCAATTCAATACTATTGCAATGGTTAAGGTaGACTGGTTCTCATCTACTA +
Preference number: 4 (lower is better)
Translates to: FDSHGVMYSKQRCFNSILLQWLR*TGSHLL
Trigger: TAGTAGATGAGAACCAGTTCACCTTAACCATTGCAA...TAGTATTGAATTGAAACACCTTTGTTTGGAATACATGACTCCATGGCTGTCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp AAGCATGTCTTGTCAATTATTTTGCACATCCTTCCAATAACCTTGCTTGAAACCTCCAATAACCTTGCTTaGAACCAATTTCACATTTCC +
Preference number: 4 (lower is better)
Translates to: KHVLSIILHILPITLLETSNNLA*NQFHIS
Trigger: GGAAATGTGAAATTGGTTTCAAGCAAGGTTATTGGA...GGTTTCAAGCAAGGTTATTGGAAGGATGTGCAAAATAATTGACAAGACATGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTCAAGTACACAGAGAGTaGATGATATTAATGACCAGT +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSQVHRE*MILMTS
Trigger: ACTGGTCATTAATATCATTCACTCTCTGTGTACTTG...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp ACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGATCTTGGCACAATCAAGTACACAGAGAGTaGATGATATTAATGACCAGT +
Preference number: 4 (lower is better)
Translates to: TLCTIPWIGFNKFGSWHNQVHRE*MILMTS
Trigger: ACTGGTCATTAATATCATTCACTCTCTGTGTACTTG...ATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR TCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTTCTTTGCAGTTGTTCTaGACACTTACATATACCAGA +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSSLQLF*TLTYTR
Trigger: TCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGA...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR TCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCCAGTCTTTTCACAGTaGTTAAATGCAATTCTAGCA +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPPVFSQ*LNAILA
Trigger: TGCTAGAATTGCATTTAATCACTGTGAAAAGACTGG...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTAAGGATGACAACCACATaGAGAAATTCTACTACAATC +
Preference number: 4 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLRMTTT*RNSTTI
Trigger: GATTGTAGTAGAATTTCTTCATGTGGTTGTCATCCT...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp TTCTACAAAGTAATAAATCATTCAGCTGATTCTGAACATCTCCATCTACAGGCAAATGCGACTAAAGACTaGATTGAAGTTGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: FYKVINHSADSEHLHLQANATKD*IEVVAA
Trigger: AGCTGCAACAACTTCAATGCAGTCTTTAGTCGCATT...TGCCTGTAGATGGAGATGTTCAGAATCAGCTGAATGATTTATTACTTTGTAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR GCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTAGGCTTTAAATTTAAATaGTGTTTCCTTCAGGAGTCG +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLGFKFK*CFLQES
Trigger: CGACTCCTGAAGGAAACAGCATTTAAATTTAAAGCC...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTATACCCAGTTCCAAAATaGCTTTTCCAGGCTATTTAT +
Preference number: 4 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLYPVPK*LFQAIY
Trigger: ATAAATAGCCTGGAAAAGGCATTTTGGAACTGGGTA...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR GCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAAAGGAAAAACCTGCGTaGTGCATCAAAGTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRKEKPA*CIKVAF
Trigger: AAAAGCAACTTTGATGCAGCACGCAGGTTTTTCCTT...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAGCTTCCCCATATTTTTaGTTGAATAGATGGGTACAT +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRASPYF*LNRWVH
Trigger: ATGTACCCATCTATTCAAGCAAAAATATGGGGAAGC...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTTTCATAATCAGTTTCTaGTACTCTCCTCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSFIISF*YSPHFG
Trigger: CCCAAAATGAGGAGAGTAGCAGAAACTGATTATGAA...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR GCA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCACACCCACTATCATATaGACCAAACCAACAAACAAA +
Preference number: 4 (lower is better)
Translates to: VEFNLLKSSNETALQETPTPTII*TKPTNK
Trigger: TTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGT...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTAAGTCAAAGGTATTTTTaGATTTCAAAGGCGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLSQRYF*ISKAAE
Trigger: TTCAGCCGCCTTTGAAATGCAAAAATACCTTTGACT...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp TTCTACAAAGTAATAAATCATTCAGCTGATTCTGAACATCTCCATCTACAGGCATACCAGTTGTCATGGTaGCAATTTCACTATAGATGG +
Preference number: 4 (lower is better)
Translates to: FYKVINHSADSEHLHLQAYQLSW*QFHYRW
Trigger: CCATCTATAGTGAAATTGGCACCATGACAACTGGTA...TGCCTGTAGATGGAGATGTTCAGAATCAGCTGAATGATTTATTACTTTGTAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR GCA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTACAAATGCCCACAAATTaGCTTTGGGATAAATCAAAC +
Preference number: 4 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLQMPTN*LWDKSN
Trigger: GTTTGATTTATCCCAAAGGCAATTTGTGGGCATTTG...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGATCAGTCTGTGGGATCTaGTACAGTTTTGTAAATTCA +
Preference number: 4 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRSVCGI*YSFVNS
Trigger: TGAATTTACAAAACTGTACCAGATCCCACAGACTGA...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTATCCTGGATTATTTCTaGACACAAGATAAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: IISGHKIRRMICSGQTAAILDYF*TQDKEN
Trigger: ATTCTCCTTATCTTGTGTCCAGAAATAATCCAGGAT...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAGAACTGATGATGGCATaGAAGAACTTTTCAGTCATC +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRELMMA*KNFSVI
Trigger: GATGACTGAAAAGTTCTTCCATGCCATCATCAGTTC...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAACAAATTTGGATCTTaGCACAATGATAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSNKFGS*HNDNRV
Trigger: CACCCTGTTATCATTGTGCCAAGATCCAAATTTGTT...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAAGATGTTTGGTATTGTaGTGGGGATTCTTCATGGTA +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRRCLVL*WGFFMV
Trigger: TACCATGAAGAATCCCCACCACAATACCAAACATCT...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp TTCTACAAAGTAATAAATCATTCAGCTGATTCTGAACATCTCCATCTACAGGCATCTTTGTTCATTGCCTaGTATTATTTTCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: FYKVINHSADSEHLHLQASLFIA*YYFPSA
Trigger: GGCAGAGGGAAAATAATACCAGGCAATGAACAAAGA...TGCCTGTAGATGGAGATGTTCAGAATCAGCTGAATGATTTATTACTTTGTAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR TCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGATCTTTGCAGTTGTTCTaGACACTTACATATACCAGA +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRSLQLF*TLTYTR
Trigger: TCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGA...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR TCA 90 bp CTTCTTGTTGGCATCTTGATCAGAATTGTATTAAGCCAGTTCATTTATTTGGGATCTGAATATGAAGACTaGTTTCCAAATGAAGACAGG +
Preference number: 4 (lower is better)
Translates to: LLVGILIRIVLSQFIYLGSEYED*FPNEDR
Trigger: CCTGTCTTCATTTGGAAATCAGTCTTCATATTCAGA...TCCCAAATAAATGAACTGGCTTAATACAATTCTGATCAAGATGCCAACAAGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
CDS-3UTR GCA 90 bp AAGAATAGCAGTAACTCTTTGTCGTTTGGCATCATCATTATGCTTGCAAAAACGACAGGAACTTCTATCTaGCTGCTTATTTTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: KNSSNSLSFGIIIMLAKTTGTSI*LLIFKK
Trigger: CTTCTTAAAAATAAGCAGGCAGATAGAAGTTCCTGT...CGTTTTTGCAAGCATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR GCA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTATTGGCATCATCATTATaGTTGCAAAAACGAACTAGA +
Preference number: 4 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLLASSL*LQKRTR
Trigger: TCTAGTTCGTTTTTGCAAGCATAATGATGATGCCAA...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR GCA 90 bp ATAGATGGGTACATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCAAGAGCTTCCCCATATTTTTaGTTGAATAGATGGGTACAT +
Preference number: 4 (lower is better)
Translates to: IDGYICFSLMVIVISLSRASPYF*LNRWVH
Trigger: ATGTACCCATCTATTCAAGCAAAAATATGGGGAAGC...TCTTGACAAGCTGATAACAATGACCATCAATGAAAAACAGATGTACCCATCTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTCATCAACCACGTCTTTaGATATATCCTGGATTATTT +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSHQPRL*IYPGLF
Trigger: AAATAATCCAGGATATATCCAAAGACGTGGTTGATG...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTGATGTCTCTAGTAACTaGCCCTCGATTTTTAAATTA +
Preference number: 4 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSDVSSN*PSIFKL
Trigger: TAATTTAAAAATCGAGGGCCAGTTACTAGAGACATC...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CCA 90 bp AAGCATGTCTTGTCAATTATTTTGCACATCCTTCCAATAACCTTGCTTGAAACCGATGTCTCTAGTAACTaGCCCTCGATTTTTAAATTA +
Preference number: 4 (lower is better)
Translates to: KHVLSIILHILPITLLETDVSSN*PSIFKL
Trigger: TAATTTAAAAATCGAGGGCCAGTTACTAGAGACATC...GGTTTCAAGCAAGGTTATTGGAAGGATGTGCAAAATAATTGACAAGACATGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAAACAAATTTGGATCTTaGCACAATGATAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRNKFGS*HNDNRV
Trigger: CACCCTGTTATCATTGTGCCAAGATCCAAATTTGTT...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGACAGAAATGGGCAACTTaGTCTAAACTTCAGAATTTC +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRQKWAT*SKLQNF
Trigger: GAAATTCTGAAGTTTAGACCAAGTTGCCCATTTCTG...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
3UTR CAA 72 bp TGTTGTTCTAAAGTAGGAGTTGGAGATAAGCATGTCTaGTCAATTATTTTGCACATCCTTCCAATAACCTTG +
Preference number: 4 (lower is better)
Translates to: CCSKVGVGDKHV*SIILHILPITL
Trigger: CAAGGTTATTGGAAGGATGTGCAAAATAATTGACAAGACATGCTTATCTCCAACTCCTACTTTAGAACAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
3UTR CAA 72 bp ATCTTGATCAGAATTGTATTAAGCCAGTTCATTTATTaGGGAAGATCTGGCATTCAACGATATTCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: ILIRIVLSQFIY*GRSGIQRYSAF
Trigger: GAAAGCTGAATATCGTTGAATGCCAGATCTTCCCAAATAAATGAACTGGCTTAATACAATTCTGATCAAGAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
CDS-3UTR GCA 90 bp TTGAATAGATGGGTACATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCTTGGCATCATCATTATaGTTGCAAAAACGAACTAGA +
Preference number: 4 (lower is better)
Translates to: LNRWVHLFFIDGHCYQLVLASSL*LQKRTR
Trigger: TCTAGTTCGTTTTTGCAAGCATAATGATGATGCCAA...GACAAGCTGATAACAATGACCATCAATGAAAAACAGATGTACCCATCTATTCAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CCA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAATCCTGGATTATTTCTaGACACAAGATAAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRILDYF*TQDKEN
Trigger: ATTCTCCTTATCTTGTGTCCAGAAATAATCCAGGAT...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CCA 90 bp TTCTACAAAGTAATAAATCATTCAGCTGATTCTGAACATCTCCATCTACAGGCAATCCTGGATTATTTCTaGACACAAGATAAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: FYKVINHSADSEHLHLQAILDYF*TQDKEN
Trigger: ATTCTCCTTATCTTGTGTCCAGAAATAATCCAGGAT...TGCCTGTAGATGGAGATGTTCAGAATCAGCTGAATGATTTATTACTTTGTAGAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CCA 90 bp CATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCAAGAATAGCAGTAACGATGTCTCTAGTAACTaGCCCTCGATTTTTAAATTA +
Preference number: 4 (lower is better)
Translates to: HLFFIDGHCYQLVKNSSNDVSSN*PSIFKL
Trigger: TAATTTAAAAATCGAGGGCCAGTTACTAGAGACATC...GTTACTGCTATTCTTGACAAGCTGATAACAATGACCATCAATGAAAAACAGATG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS CCA 90 bp ACAGCCATCACAGTCCGAGACGCCGCCATGACACCCCACCGGAAGTaGGATCCTTTCCACGGCCCGGGGAGAGGGAGCGCGAGCGAGCTA +
Preference number: 5 (lower is better)
Translates to: TAITVRDAAMTPHRK*DPFHGPGRGSASEL
Trigger: TAGCTCGCTCGCGCTCCCTCTCCCCGGGCCGTGGAAAGGATCCCACTTCCGGTGGGGTGTCATGGCGGCGTCTCGGACTGTGATGGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000487476.5
CDS CCA 90 bp CCTGTTTTTATTGGAAGCTGCTCGTCGAAGCGGCTGACCACGGCCTaGACCCATTCCACCGGCCTGTGCGCGGCCATGTCCTCCCCGCGG +
Preference number: 5 (lower is better)
Translates to: PVFIGSCSSKRLTTA*THSTGLCAAMSSPR
Trigger: CCGCGGGGAGGACATGGCCGCGCACAGGCCGGTGGAATGGGTCCAGGCCGTGGTCAGCCGCTTCGACGAGCAGCTTCCAATAAAAACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000431387.8
ENST00000487476.5
ENST00000579081.5
CDS-3UTR CAA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGAGACCATGGTGGCAGCTaGGCATCCTTGGCACTGGGT +
Preference number: 5 (lower is better)
Translates to: FQGLETVKLTPETLGCGRDHGGS*ASLALG
Trigger: ACCCAGTGCCAAGGATGCCAAGCTGCCACCATGGTC...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS GCA 90 bp GTGAGCAGGTTAAGAAGTGCTAGTTTGAAACTGCCAGCGCTTCTTTaGTTCTGCACTTGGCTTGCGGATCCGTGGCGAGTTCGTCCACTG +
Preference number: 5 (lower is better)
Translates to: VSRLRSASLKLPALL*FCTWLADPWRVRPL
Trigger: CAGTGGACGAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACTAGCACTTCTTAACCTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS CCA 90 bp AGAAGTGCTAGTTTGAAACTGCCAGCGCTTCTTTGCTTCTGCACTTaGCTTGCGGATCCGTGGCGAGTTCGTCCACTGTTACAGTGGCCA +
Preference number: 5 (lower is better)
Translates to: RSASLKLPALLCFCT*LADPWRVRPLLQWP
Trigger: TGGCCACTGTAACAGTGGACGAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACTAGCACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGATGGTCTGGCCGACAGTaGGATAGGTGGCTGCAAGGT +
Preference number: 5 (lower is better)
Translates to: FQGLETVKLTPETLGCGRWSGRQ*DRWLQG
Trigger: ACCTTGCAGCCACCTATCCAACTGTCGGCCAGACCA...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp CAGAACCTTTGGGAGAGGACCATGGCTGAGTCTCCTTTAGTGTCCTATAGGAAGTGGTCTGGCCGACAGTaGGATAGGTGGCTGCAAGGT +
Preference number: 5 (lower is better)
Translates to: QNLWERTMAESPLVSYRKWSGRQ*DRWLQG
Trigger: ACCTTGCAGCCACCTATCCAACTGTCGGCCAGACCA...CTTCCTATAGGACACTAAAGGAGACTCAGCCATGGTCCTCTCCCAAAGGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGCGGGCCCCTGTTTTCTaGGATTACAAAGCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELRAPVF*DYKARA
Trigger: AGCTCTTGCTTTGTAATCCAAGAAAACAGGGGCCCG...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS GCA 90 bp AGGTTAAGAAGTGCTAGTTTGAAACTGCCAGCGCTTCTTTGCTTCTaGACTTGGCTTGCGGATCCGTGGCGAGTTCGTCCACTGTTACAG +
Preference number: 5 (lower is better)
Translates to: RLRSASLKLPALLCF*TWLADPWRVRPLLQ
Trigger: CTGTAACAGTGGACGAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACTAGCACTTCTTAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp GTGGCGAGTTCGTCCACTGTTACAGTGGCCAGTGGTAGGGGAGAGTTCAACGTTCAATCCAATGCGGAATaGGTGATGATTCGATGGAGT +
Preference number: 5 (lower is better)
Translates to: VASSSTVTVASGRGEFNVQSNAE*VMIRWS
Trigger: ACTCCATCGAATCATCACCAATTCCGCATTGGATTG...AACGTTGAACTCTCCCCTACCACTGGCCACTGTAACAGTGGACGAACTCGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGCGGGCCCCTGTTTTCTaGGATTACAAAGCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQRAPVF*DYKARA
Trigger: AGCTCTTGCTTTGTAATCCAAGAAAACAGGGGCCCG...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CAA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGTCTGTTTTAAAGCGATaGCTAGGCCCGGTATGGGTA +
Preference number: 5 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELSVLKR*LGPVWV
Trigger: TACCCATACCGGGCCTAGCAATCGCTTTAAAACAGA...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCGCTTCTGCACTTGGCTaGCGGATCCGTGGCGAGTTC +
Preference number: 5 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAASALG*RIRGEF
Trigger: GAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGC...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GTAAGATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACACTCTGCACTCTTTGCTTCTGCACTaGGCTTGCGGATCCGTGGCG +
Preference number: 5 (lower is better)
Translates to: VRCLVLWWGFFMVHHTLHSLLLH*ACGSVA
Trigger: CGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGA...GTGCAGAGTGTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCGACCATGGTGGCAGCTaGGCATCCTTGGCACTGGGT +
Preference number: 5 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHADHGGS*ASLALG
Trigger: ACCCAGTGCCAAGGATGCCAAGCTGCCACCATGGTC...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCTCGGTGCCATTCGTATaGCTGGGTGTGCTCCACAAC +
Preference number: 5 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGSVPFV*LGVLHN
Trigger: GTTGTGGAGCACACCCAGCAATACGAATGGCACCGA...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGACGGGCCCCTGTTTTCTaGGATTACAAAGCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: FQGLETVKLTPETLGCGRRAPVF*DYKARA
Trigger: AGCTCTTGCTTTGTAATCCAAGAAAACAGGGGCCCG...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp CAGTATCTGCCATCACCTCAGCTTTTATTGATCCCAAGCCACCTGTTGCACTGGCGGGCCCCTGTTTTCTaGGATTACAAAGCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: QYLPSPQLLLIPSHLLHWRAPVF*DYKARA
Trigger: AGCTCTTGCTTTGTAATCCAAGAAAACAGGGGCCCG...CCAGTGCAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTGATGGCAGATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAGCCTTTTGCTACCTTaGAGGCCAGTCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHASLLLP*RPVSSR
Trigger: GCGGCTGCTGACTGGCCTCAAAGGTAGCAAAAGGCT...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CAGTATCTGCCATCACCTCAGCTTTTATTGATCCCAAGCCACCTGTTGCACTGGGCTAGCTTGAGAGCATaGTGGAATACCTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: QYLPSPQLLLIPSHLLHWASLRA*WNTFRS
Trigger: GGACCTGAAGGTATTCCACAATGCTCTCAAGCTAGC...CCAGTGCAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTGATGGCAGATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp AGCTACCCAAAAGAGGGCTTTGTGCAGAGGCGAGTCCTTATTAAGAAGTGGCTGAGTTCAACGTTCTCCTaGTCGATTCCTGGGGAATGC +
Preference number: 5 (lower is better)
Translates to: SYPKEGFVQRRVLIKKWLSSTFS*SIPGEC
Trigger: GCATTCCCCAGGAATCGACAAGGAGAACGTTGAACT...CAGCCACTTCTTAATAAGGACTCGCCTCTGCACAAAGCCCTCTTTTGGGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCGCTTCTGCACTTGGCTaGCGGATCCGTGGCGAGTTC +
Preference number: 5 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRASALG*RIRGEF
Trigger: GAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGC...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCTCTTTGCTTCTGCACTaGGCTTGCGGATCCGTGGCG +
Preference number: 5 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHASLLLH*ACGSVA
Trigger: CGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGA...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATTCTTTGCTTCTGCACTaGGCTTGCGGATCCGTGGCG +
Preference number: 5 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDSLLLH*ACGSVA
Trigger: CGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGA...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATTCGGTGCCATTCGTATaGCTGGGTGTGCTCCACAAC +
Preference number: 5 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDSVPFV*LGVLHN
Trigger: GTTGTGGAGCACACCCAGCAATACGAATGGCACCGA...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGTCGGTGCCATTCGTATaGCTGGGTGTGCTCCACAAC +
Preference number: 5 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSSVPFV*LGVLHN
Trigger: GTTGTGGAGCACACCCAGCAATACGAATGGCACCGA...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CAA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGTTCTGCTGTACTGCCTaGGGTTTCGGGCCCCTGTTT +
Preference number: 5 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSFCCTA*GFGPLF
Trigger: AAACAGGGGCCCGAAACCCAAGGCAGTACAGCAGAA...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CAA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGTGTAAAGCAAGCACATaGCCGTCACTTATGAAGGAA +
Preference number: 5 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELCKAST*PSLMKE
Trigger: TTCCTTCATAAGTGACGGCAATGTGCTTGCTTTACA...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGATCACCTCAGCTTTTATaGATCCCAAGCCACCTGTTG +
Preference number: 5 (lower is better)
Translates to: FQGLETVKLTPETLGCGRSPQLL*IPSHLL
Trigger: CAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTGA...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp GTGGCGAGTTCGTCCACTGTTACAGTGGCCAGTGGTAGGGGAGAGTTCAACGTTTCTGGACTCTTGTCATaGAATATACGGAGACTATCT +
Preference number: 5 (lower is better)
Translates to: VASSSTVTVASGRGEFNVSGLLS*NIRRLS
Trigger: AGATAGTCTCCGTATATTCAATGACAAGAGTCCAGA...AACGTTGAACTCTCCCCTACCACTGGCCACTGTAACAGTGGACGAACTCGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAGCTTCTGCACTTGGCTaGCGGATCCGTGGCGAGTTC +
Preference number: 5 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLASALG*RIRGEF
Trigger: GAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGC...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp GAACTCTGTCAGACTGAGTCTCAAAACTTGCTTGGTCTCTTCACTAAAATGAAGGCTTCTGCACTTGGCTaGCGGATCCGTGGCGAGTTC +
Preference number: 5 (lower is better)
Translates to: ELCQTESQNLLGLFTKMKASALG*RIRGEF
Trigger: GAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGC...CTTCATTTTAGTGAAGAGACCAAGCAAGTTTTGAGACTCAGTCTGACAGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATACTGCCAGCGCTTCTTaGCTTCTGCACTTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDTASAS*LLHLAC
Trigger: GCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGT...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ACTTTGCAGGTAAGATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACACTGCCAGCGCTTCTTaGCTTCTGCACTTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: TLQVRCLVLWWGFFMVHHTASAS*LLHLAC
Trigger: GCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGT...GTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTACCTGCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGAACTCCAGGCACATATaGGTTTCATCTCTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQNSRHI*VSSLRA
Trigger: AGCTCTGAGAGATGAAACCAATATGTGCCTGGAGTT...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS TCA 90 bp GAATTCCGAAGTTCAGCTGCATGCTGGTTTCCTTCACGACAGGTGTaGAGAAAATGGCAGATTTCTGGCAGCAACTGTTTGACCAGCATC +
Preference number: 5 (lower is better)
Translates to: EFRSSAACWFPSRQV*RKWQISGSNCLTSI
Trigger: GATGCTGGTCAAACAGTTGCTGCCAGAAATCTGCCATTTTCTTCACACCTGTCGTGAAGGAAACCAGCATGCAGCTGAACTTCGGAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000431387.8
ENST00000487476.5
ENST00000489712.6
ENST00000490416.2
ENST00000495910.6
ENST00000579081.5
CDS-3UTR CAA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCTCGGTGCCATTCGTATaGCTGGGTGTGCTCCACAAC +
Preference number: 5 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRSVPFV*LGVLHN
Trigger: GTTGTGGAGCACACCCAGCAATACGAATGGCACCGA...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CAGATCTGTAATCTGCCCAAGGCTTCCCCATATTTTTGCTTGAATAGATGGGTATCGGTGCCATTCGTATaGCTGGGTGTGCTCCACAAC +
Preference number: 5 (lower is better)
Translates to: QICNLPKASPYFCLNRWVSVPFV*LGVLHN
Trigger: GTTGTGGAGCACACCCAGCAATACGAATGGCACCGA...TACCCATCTATTCAAGCAAAAATATGGGGAAGCCTTGGGCAGATTACAGATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTTTCTGCTGTACTGCCTaGGGTTTCGGGCCCCTGTTT +
Preference number: 5 (lower is better)
Translates to: KSSNETALQETPLSPRFIFCCTA*GFGPLF
Trigger: AAACAGGGGCCCGAAACCCAAGGCAGTACAGCAGAA...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAAGCCTTTTGCTACCTTaGAGGCCAGTCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTSLLLP*RPVSSR
Trigger: GCGGCTGCTGACTGGCCTCAAAGGTAGCAAAAGGCT...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ACCACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGATCTTGGCACAGCCTTTTGCTACCTTaGAGGCCAGTCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: TTLCTIPWIGFNKFGSWHSLLLP*RPVSSR
Trigger: GCGGCTGCTGACTGGCCTCAAAGGTAGCAAAAGGCT...GTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp CCATGTGTGGAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTAAGAAAGTAACATTAAGTAATGCGATATaGAGCAGTGTCCCAGGGACA +
Preference number: 5 (lower is better)
Translates to: PCVEALRESGPVATKKVTLSNAI*SSVPGT
Trigger: TGTCCCTGGGACACTGCTCAATATCGCATTACTTAA...TGTTACTTTCTTAGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTCCACACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp TTAATGACCAGTCCATGTGTGGAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTATAAAGAGGGTGTTGTaGGCAGGGATACATAAACCT +
Preference number: 5 (lower is better)
Translates to: LMTSPCVEALRESGPVATIKRVL*AGIHKP
Trigger: AGGTTTATGTATCCCTGCCAACAACACCCTCTTTAT...AGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTCCACACATGGACTGGTCATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp CAGTATCTGCCATCACCTCAGCTTTTATTGATCCCAAGCCACCTGTTGCACTGGACATCAAGGGAATTGTaGAAGGACAGCATCAGCATG +
Preference number: 5 (lower is better)
Translates to: QYLPSPQLLLIPSHLLHWTSREL*KDSISM
Trigger: CATGCTGATGCTGTCCTTCAACAATTCCCTTGATGT...CCAGTGCAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTGATGGCAGATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCCACTGGTCCAGCCACTaGCACGTTGGAATATCTCTC +
Preference number: 5 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAHWSSH*HVGISL
Trigger: GAGAGATATTCCAACGTGCAAGTGGCTGGACCAGTG...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCCCTGCTGAATACAAGTaGACCTCATCAAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGPAEYK*TSSSCS
Trigger: GCTGCAGCTTGATGAGGTCAACTTGTATTCAGCAGG...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTATGGTCTGGCCGACAGTaGGATAGGTGGCTGCAAGGT +
Preference number: 5 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLWSGRQ*DRWLQG
Trigger: ACCTTGCAGCCACCTATCCAACTGTCGGCCAGACCA...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp TTAATGACCAGTCCATGTGTGGAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTGTAAGATGTTTGGTATaGTGGTGGGGATTCTTCATG +
Preference number: 5 (lower is better)
Translates to: LMTSPCVEALRESGPVATVRCLV*WWGFFM
Trigger: CATGAAGAATCCCCACCACAATACCAAACATCTTAC...AGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTCCACACATGGACTGGTCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp TGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTTTCTTTGCTTCTGCACTaGGCTTGCGGATCCGTGGCG +
Preference number: 5 (lower is better)
Translates to: WQITWGNELPFKEFGCSFSLLLH*ACGSVA
Trigger: CGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGA...AAAGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTACTGCCAGCGCTTCTTaGCTTCTGCACTTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: KSSNETALQETPLSPRFITASAS*LLHLAC
Trigger: GCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGT...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTACTGCCAGCGCTTCTTaGCTTCTGCACTTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSTASAS*LLHLAC
Trigger: GCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGT...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCACTGCCAGCGCTTCTTaGCTTCTGCACTTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: QVWQITWGNELPFKEFGCTASAS*LLHLAC
Trigger: GCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGT...GCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGAAAGCTCTGCAACATTaGGGAGAAGAAGGTTATCAG +
Preference number: 5 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQKALQH*GEEGYQ
Trigger: CTGATAACCTTCTTCTCCCAAATGTTGCAGAGCTTT...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CAA 90 bp ACTTTGCAGGTAAGATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACACCCAAAAGAGGGCTTaGTGCAGAGGCGAGTCCTTT +
Preference number: 5 (lower is better)
Translates to: TLQVRCLVLWWGFFMVHHTQKRA*CRGESF
Trigger: AAAGGACTCGCCTCTGCACAAAGCCCTCTTTTGGGT...GTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTACCTGCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581790.5
CDS-3UTR CAA 90 bp GTAAGATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACACTCTGCACTCTGGCAGCAACTGTTaGACCAGCATCGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: VRCLVLWWGFFMVHHTLHSGSNC*TSIVSS
Trigger: AGATGAAACGATGCTGGTCAAACAGTTGCTGCCAGA...GTGCAGAGTGTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATCGGTGCCATTCGTATaGCTGGGTGTGCTCCACAAC +
Preference number: 5 (lower is better)
Translates to: HTISRNDIYLLLTETTHQSVPFV*LGVLHN
Trigger: GTTGTGGAGCACACCCAGCAATACGAATGGCACCGA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CAA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAATTCTGCTGTACTGCCTaGGGTTTCGGGCCCCTGTTT +
Preference number: 5 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKFCCTA*GFGPLF
Trigger: AAACAGGGGCCCGAAACCCAAGGCAGTACAGCAGAA...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATTCTGCTGTACTGCCTaGGGTTTCGGGCCCCTGTTT +
Preference number: 5 (lower is better)
Translates to: HTISRNDIYLLLTETTHQFCCTA*GFGPLF
Trigger: AAACAGGGGCCCGAAACCCAAGGCAGTACAGCAGAA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CAA 90 bp GTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACTTATTCTGCTGTACTGCCTaGGGTTTCGGGCCCCTGTTT +
Preference number: 5 (lower is better)
Translates to: VSSSIPGRYVSIKASRNLFCCTA*GFGPLF
Trigger: AAACAGGGGCCCGAAACCCAAGGCAGTACAGCAGAA...TAAGTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGAGGTATGCAAGAAGTGTaGCCATCTTATCAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: FQGLETVKLTPETLGCGRGMQEV*PSYQKV
Trigger: GACCTTTTGATAAGATGGCAACACTTCTTGCATACC...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCTCCCAGGGACATCTTTaGGCCGAATCTTGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHASQGHL*AESWCV
Trigger: AACACACCAAGATTCGGCCAAAAGATGTCCCTGGGA...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCTCACCTCAGCTTTTATaGATCCCAAGCCACCTGTTG +
Preference number: 5 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGSPQLL*IPSHLL
Trigger: CAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTGA...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCGCCACATCAAGGGAATaGTTGAAGGACAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAATSRE*LKDSIS
Trigger: GCTGATGCTGTCCTTCAACAATTCCCTTGATGTGGC...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GATCCCAAGCCACCTGTTGCACTGGTTTTGATGAAACTGTCTAGTACAACATCAGCCACATCAAGGGAATaGTTGAAGGACAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: DPKPPVALVLMKLSSTTSATSRE*LKDSIS
Trigger: GCTGATGCTGTCCTTCAACAATTCCCTTGATGTGGC...TGATGTTGTACTAGACAGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp GCAGTATCTGCCATCACCTCAGCTTTTATTGATCCCAAGCCACCTGTTGCACTGAACAAGAGCTCTTGGTaGCAGGGATGGATTATATTG +
Preference number: 5 (lower is better)
Translates to: AVSAITSAFIDPKPPVALNKSSW*QGWIIL
Trigger: CAATATAATCCATCCCTGCAACCAAGAGCTCTTGTT...CAGTGCAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTGATGGCAGATACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCACCCAAAAGAGGGCTTaGTGCAGAGGCGAGTCCTTA +
Preference number: 5 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRTQKRA*CRGESL
Trigger: TAAGGACTCGCCTCTGCACAAAGCCCTCTTTTGGGT...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CTGGGCACCTGGCTCAGTCATGAACAGGTGTTGAGTGAATGGAAGACAGAGCTGAATGATAACAGGGTGTaGATCTTAGAGTCCAACAAA +
Preference number: 5 (lower is better)
Translates to: LGTWLSHEQVLSEWKTELNDNRV*ILESNK
Trigger: TTTGTTGGACTCTAAGATCAACACCCTGTTATCATT...CAGCTCTGTCTTCCATTCACTCAACACCTGTTCATGACTGAGCCAGGTGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAGCTTCTGCACTTGGCTaGCGGATCCGTGGCGAGTTC +
Preference number: 5 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRASALG*RIRGEF
Trigger: GAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGC...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCCAAGGCTTCGAAGAGTaGATCATCTGGCAACATGGC +
Preference number: 5 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAQGFEE*IIWQHG
Trigger: GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTG...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp AACGATATTCAGCTTTCCAACCCAGGACTGTGGTCTGTCTCTCCATTTGCTGGAAATTTGGATGCAGCTTaGTCAGAGGCTGTTCTGATG +
Preference number: 5 (lower is better)
Translates to: NDIQLSNPGLWSVSPFAGNLDAA*SEAVLM
Trigger: CATCAGAACAGCCTCTGACAAAGCTGCATCCAAATT...TCCAGCAAATGGAGAGACAGACCACAGTCCTGGGTTGGAAAGCTGAATATCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
CDS-3UTR CAA 90 bp CTGGATACACTCTCTTCTTGTTGGCATCTTGATCAGAATTGTATTAAGCCAGTTAGTGATCCGCCTGCCTaGGCCTTCCAGTGTTGGGAT +
Preference number: 5 (lower is better)
Translates to: LDTLSSCWHLDQNCIKPVSDPPA*AFQCWD
Trigger: ATCCCAACACTGGAAGGCCAAGGCAGGCGGATCACT...AACTGGCTTAATACAATTCTGATCAAGATGCCAACAAGAAGAGAGTGTATCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422121.2
CDS-3UTR CAA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCTGCTCAGTACTGACTTaGGTATGTGTGTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGCSVLT*VCVFCC
Trigger: ACAGCAGAACACACATACCAAAGTCAGTACTGAGCA...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGTCTGGCAGCAACTGTTaGACCAGCATCGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSSGSNC*TSIVSS
Trigger: AGATGAAACGATGCTGGTCAAACAGTTGCTGCCAGA...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CAA 90 bp AGCTACCCAAAAGAGGGCTTTGTGCAGAGGCGAGTCCTTATTAAGAAGTGGCTGAAGACTGCATTGAAGTaGTTGCAGCTGAGAGAAAAT +
Preference number: 5 (lower is better)
Translates to: SYPKEGFVQRRVLIKKWLKTALK*LQLREN
Trigger: ATTTTCTCTCAGCTGCAACAACTTCAATGCAGTCTT...CAGCCACTTCTTAATAAGGACTCGCCTCTGCACAAAGCCCTCTTTTGGGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTCGGGCCCCTGTTTTCTaGGATTACAAAGCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSRAPVF*DYKARA
Trigger: AGCTCTTGCTTTGTAATCCAAGAAAACAGGGGCCCG...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATTCTGTTTTAAAGCGATaGCTAGGCCCGGTATGGGTA +
Preference number: 5 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDSVLKR*LGPVWV
Trigger: TACCCATACCGGGCCTAGCAATCGCTTTAAAACAGA...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGCCTTTTGCTACCTTaGAGGCCAGTCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSSLLLP*RPVSSR
Trigger: GCGGCTGCTGACTGGCCTCAAAGGTAGCAAAAGGCT...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTGCTAGCTTGAGAGCATaGTGGAATACCTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSASLRA*WNTFRS
Trigger: GGACCTGAAGGTATTCCACAATGCTCTCAAGCTAGC...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGCTAGCTTGAGAGCATaGTGGAATACCTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEASLRA*WNTFRS
Trigger: GGACCTGAAGGTATTCCACAATGCTCTCAAGCTAGC...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCATTGCCCTAGGACTTTaGTTCGCTCTGCTGAAGTTA +
Preference number: 5 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGIALGL*FALLKL
Trigger: TAACTTCAGCAGAGCGAACAAAAGTCCTAGGGCAAT...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAATCCCAGGGACATCTTTaGGCCGAATCTTGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQESQGHL*AESWCV
Trigger: AACACACCAAGATTCGGCCAAAAGATGTCCCTGGGA...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CTTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCATCTCCCAGGGACATCTTTaGGCCGAATCTTGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: LETNFTFPEAKATAVSAISQGHL*AESWCV
Trigger: AACACACCAAGATTCGGCCAAAAGATGTCCCTGGGA...GATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp GAAGCTCTAAGGGAGAGCGGACCTGTGGCTACTAAGAAAGTAACAACGTGGAAGTCCCCATATTTTTGCTaGAATAGATGGGTACATCTG +
Preference number: 5 (lower is better)
Translates to: EALRESGPVATKKVTTWKSPYFC*NRWVHL
Trigger: CAGATGTACCCATCTATTCAAGCAAAAATATGGGGA...CTTCCACGTTGTTACTTTCTTAGTAGCCACAGGTCCGCTCTCCCTTAGAGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCGCCACATCAAGGGAATaGTTGAAGGACAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRATSRE*LKDSIS
Trigger: GCTGATGCTGTCCTTCAACAATTCCCTTGATGTGGC...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACACTGGTCCAGCCACTaGCACGTTGGAATATCTCTC +
Preference number: 5 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTHWSSH*HVGISL
Trigger: GAGAGATATTCCAACGTGCAAGTGGCTGGACCAGTG...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGACAGGGATGGATTATATaGGAATGCAAATCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: FQGLETVKLTPETLGCGRQGWII*ECKSLS
Trigger: GCTCAAAGATTTGCATTCCAATATAATCCATCCCTG...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAACCCAAAAGAGGGCTTaGTGCAGAGGCGAGTCCTTA +
Preference number: 5 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKTQKRA*CRGESL
Trigger: TAAGGACTCGCCTCTGCACAAAGCCCTCTTTTGGGT...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAACCCAAAAGAGGGCTTaGTGCAGAGGCGAGTCCTTA +
Preference number: 5 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLTQKRA*CRGESL
Trigger: TAAGGACTCGCCTCTGCACAAAGCCCTCTTTTGGGT...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCCTGCTGAATACAAGTaGACCTCATCAAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRPAEYK*TSSSCS
Trigger: GCTGCAGCTTGATGAGGTCAACTTGTATTCAGCAGG...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGATCTGGACTCTTGTCATaGAATATACGGAGACTATCT +
Preference number: 5 (lower is better)
Translates to: FQGLETVKLTPETLGCGRSGLLS*NIRRLS
Trigger: AGATAGTCTCCGTATATTCAATGACAAGAGTCCAGA...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGATGGTCTGGCCGACAGTaGGATAGGTGGCTGCAAGGT +
Preference number: 5 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRWSGRQ*DRWLQG
Trigger: ACCTTGCAGCCACCTATCCAACTGTCGGCCAGACCA...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATACAACAGGAAAGACTTaGGGAAACACAACACTGGCC +
Preference number: 5 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDTTGKT*GNTTLA
Trigger: GGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGT...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTGGGAATGCTGGGAAGTaGCAAGTGAGGTCATGGAAT +
Preference number: 5 (lower is better)
Translates to: KSSNETALQETPLSPRFIGNAGK*QVRSWN
Trigger: ATTCCATGACCTCACTTGCAACTTCCCAGCATTCCC...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTGGGAATGCTGGGAAGTaGCAAGTGAGGTCATGGAAT +
Preference number: 5 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSGNAGK*QVRSWN
Trigger: ATTCCATGACCTCACTTGCAACTTCCCAGCATTCCC...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTATCTTTGCTTCTGCACTaGGCTTGCGGATCCGTGGCG +
Preference number: 5 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLSLLLH*ACGSVA
Trigger: CGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGA...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGATTAATGCTATTACGTTaGAAACTGCCAGCGCTTCTT +
Preference number: 5 (lower is better)
Translates to: FQGLETVKLTPETLGCGRLMLLR*KLPALL
Trigger: AAGAAGCGCTGGCAGTTTCAAACGTAATAGCATTAA...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTCAAGGCTTCGAAGAGTaGATCATCTGGCAACATGGC +
Preference number: 5 (lower is better)
Translates to: KSSNETALQETPLSPRFIQGFEE*IIWQHG
Trigger: GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTG...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TCTGGCATTCAACGATATTCAGCTTTCCAACCCAGGACTGTGGTCTGTCTCTCCACTTGGGGCAATGAATaGCCCTTTAAAGAATTTGGA +
Preference number: 5 (lower is better)
Translates to: SGIQRYSAFQPRTVVCLSTWGNE*PFKEFG
Trigger: TCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGT...GGAGAGACAGACCACAGTCCTGGGTTGGAAAGCTGAATATCGTTGAATGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422121.2
CDS-3UTR CAA 90 bp AACATTTCCCCAGTAGGTCCCAAAGGGACTACTATCCCTCCAGGCAGAACACAGAAACGGTCTCCAACTTaGCTCATGATACAAAAAGAT +
Preference number: 5 (lower is better)
Translates to: NISPVGPKGTTIPPGRTQKRSPT*LMIQKD
Trigger: ATCTTTTTGTATCATGAGCAAAGTTGGAGACCGTTT...CTGTGTTCTGCCTGGAGGGATAGTAGTCCCTTTGGGACCTACTGGGGAAATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CAA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAGCTGTCCTGTTTTTATaGGAAGCTGCTCGTCGAAGC +
Preference number: 5 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTAVLFL*EAARRS
Trigger: GCTTCGACGAGCAGCTTCCAATAAAAACAGGACAGC...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAGCTGTCCTGTTTTTATaGGAAGCTGCTCGTCGAAGC +
Preference number: 5 (lower is better)
Translates to: HTISRNDIYLLLTETTHQAVLFL*EAARRS
Trigger: GCTTCGACGAGCAGCTTCCAATAAAAACAGGACAGC...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CAA 90 bp GGTGCCAATTTCACTATAGATGGTATATGCGAGAGCCTTACCTTCCTGGCAAAAATCTCATTGTGTCCTTaGGTTGCCCAGCAAGACATT +
Preference number: 5 (lower is better)
Translates to: GANFTIDGICESLTFLAKISLCP*VAQQDI
Trigger: AATGTCTTGCTGGGCAACCAAAGGACACAATGAGAT...TTTTGCCAGGAAGGTAAGGCTCTCGCATATACCATCTATAGTGAAATTGGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CAA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGCGACTAAAGACTGCATaGAAGTTGTTGCAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSRLKTA*KLLQLR
Trigger: TCTCAGCTGCAACAACTTCAATGCAGTCTTTAGTCG...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CAA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATCAATCCAATGCGGAATaGGTGATGATTCGATGGAGT +
Preference number: 5 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDQSNAE*VMIRWS
Trigger: ACTCCATCGAATCATCACCAATTCCGCATTGGATTG...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAACGGGCCCCTGTTTTCTaGGATTACAAAGCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: HTISRNDIYLLLTETTHQRAPVF*DYKARA
Trigger: AGCTCTTGCTTTGTAATCCAAGAAAACAGGGGCCCG...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CAA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCTTCTGCTGTACTGCCTaGGGTTTCGGGCCCCTGTTT +
Preference number: 5 (lower is better)
Translates to: VEFNLLKSSNETALQETPFCCTA*GFGPLF
Trigger: AAACAGGGGCCCGAAACCCAAGGCAGTACAGCAGAA...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCGGTATGCAAGAAGTGTaGCCATCTTATCAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGGMQEV*PSYQKV
Trigger: GACCTTTTGATAAGATGGCAACACTTCTTGCATACC...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCATGAAAACAAGCCTTTaGCTACCTTTGAGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAMKTSL*LPLRPV
Trigger: GACTGGCCTCAAAGGTAGCAAAAGGCTTGTTTTCAT...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAGCTAGCTTGAGAGCATaGTGGAATACCTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKASLRA*WNTFRS
Trigger: GGACCTGAAGGTATTCCACAATGCTCTCAAGCTAGC...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCATAAAGAGGGTGTTGTaGGCAGGGATACATAAACCT +
Preference number: 5 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGIKRVL*AGIHKP
Trigger: AGGTTTATGTATCCCTGCCAACAACACCCTCTTTAT...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ATGATATTAATGACCAGTCCATGTGTGGAAGCTCTAAGGGAGAGCGGACCTGTGTCCCCATATTTTTGCTaGAATAGATGGGTACATCTG +
Preference number: 5 (lower is better)
Translates to: MILMTSPCVEALRESGPVSPYFC*NRWVHL
Trigger: CAGATGTACCCATCTATTCAAGCAAAAATATGGGGA...CACAGGTCCGCTCTCCCTTAGAGCTTCCACACATGGACTGGTCATTAATATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp CTGGTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACATGACAGCAGCTGACTaGACTTTGCTAATGCCAAAC +
Preference number: 5 (lower is better)
Translates to: LVSSSIPGRYVSIKASRNMTAAD*TLLMPN
Trigger: GTTTGGCATTAGCAAAGTCAAGTCAGCTGCTGTCAT...GTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp AATATGAAGACTGATTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAACACTGGTCCAGCCACTaGCACGTTGGAATATCTCTC +
Preference number: 5 (lower is better)
Translates to: NMKTDFQMKTGLADYLGQHWSSH*HVGISL
Trigger: GAGAGATATTCCAACGTGCAAGTGGCTGGACCAGTG...TTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAATCAGTCTTCATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp TCATGGTACACCACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGACACTGGTCCAGCCACTaGCACGTTGGAATATCTCTC +
Preference number: 5 (lower is better)
Translates to: SWYTTLCTIPWIGFNKFGHWSSH*HVGISL
Trigger: GAGAGATATTCCAACGTGCAAGTGGCTGGACCAGTG...TCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CAA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAACAAGAGCTCTTGGTaGCAGGGATGGATTATATTG +
Preference number: 5 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGNKSSW*QGWIIL
Trigger: CAATATAATCCATCCCTGCAACCAAGAGCTCTTGTT...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAGCTTCTATCAGAACTaGACTGTTGTAAGTGTCAGG +
Preference number: 5 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGSFYQN*TVVSVR
Trigger: CCTGACACTTACAACAGTCAAGTTCTGATAGAAGCT...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CTTCATGGTACACCACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGACCCAAAAGAGGGCTTaGTGCAGAGGCGAGTCCTTA +
Preference number: 5 (lower is better)
Translates to: LHGTPHSAQFHGLDLTNLTQKRA*CRGESL
Trigger: TAAGGACTCGCCTCTGCACAAAGCCCTCTTTTGGGT...CAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp TGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTTCCTGCTGAATACAAGTaGACCTCATCAAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: WQITWGNELPFKEFGCSFPAEYK*TSSSCS
Trigger: GCTGCAGCTTGATGAGGTCAACTTGTATTCAGCAGG...AAAGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp CCTGTTGCACTGGTTTTGATGAAACTGTCTAGTACAACATCAAGCAGATCTGTACCTGCTGAATACAAGTaGACCTCATCAAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PVALVLMKLSSTTSSRSVPAEYK*TSSSCS
Trigger: GCTGCAGCTTGATGAGGTCAACTTGTATTCAGCAGG...TACAGATCTGCTTGATGTTGTACTAGACAGTTTCATCAAAACCAGTGCAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCACTTCCTCTGGACTCTaGTCATTGAATATACGGAGA +
Preference number: 5 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGTSSGL*SLNIRR
Trigger: TCTCCGTATATTCAATGACAAGAGTCCAGAGGAAGT...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp AATACCTTCAGGTCCTCTTCTAAAGCCAAGGTGGCAGCAGGTAGTTTCTGTTGTACTTCCTCTGGACTCTaGTCATTGAATATACGGAGA +
Preference number: 5 (lower is better)
Translates to: NTFRSSSKAKVAAGSFCCTSSGL*SLNIRR
Trigger: TCTCCGTATATTCAATGACAAGAGTCCAGAGGAAGT...ACAACAGAAACTACCTGCTGCCACCTTGGCTTTAGAAGAGGACCTGAAGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp AAACGGTCCTGCAAACCGCCACAAGCCATTAAAACCAAAACTTTGCAGGTAAGAAACAAAATGATCCATTaGCTTGCAGTGCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: KRSCKPPQAIKTKTLQVRNKMIH*LAVPLQ
Trigger: CTGGAGTGGCACTGCAAGCAAATGGATCATTTTGTT...TCTTACCTGCAAAGTTTTGGTTTTAATGGCTTGTGGCGGTTTGCAGGACCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CAA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTACAACAGGAAAGACTTaGGGAAACACAACACTGGCC +
Preference number: 5 (lower is better)
Translates to: KSSNETALQETPLSPRFITTGKT*GNTTLA
Trigger: GGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGT...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp CAGATCTGTAATCTGCCCAAGGCTTCCCCATATTTTTGCTTGAATAGATGGGTAACAACAGGAAAGACTTaGGGAAACACAACACTGGCC +
Preference number: 5 (lower is better)
Translates to: QICNLPKASPYFCLNRWVTTGKT*GNTTLA
Trigger: GGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGT...TACCCATCTATTCAAGCAAAAATATGGGGAAGCCTTGGGCAGATTACAGATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAGGGAATGCTGGGAAGTaGCAAGTGAGGTCATGGAAT +
Preference number: 5 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTGNAGK*QVRSWN
Trigger: ATTCCATGACCTCACTTGCAACTTCCCAGCATTCCC...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAGGGAATGCTGGGAAGTaGCAAGTGAGGTCATGGAAT +
Preference number: 5 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLGNAGK*QVRSWN
Trigger: ATTCCATGACCTCACTTGCAACTTCCCAGCATTCCC...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTAAGTTCAACGTTCTCCTaGTCGATTCCTGGGGAATGC +
Preference number: 5 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLSSTFS*SIPGEC
Trigger: GCATTCCCCAGGAATCGACAAGGAGAACGTTGAACT...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTACAAGGCTTCGAAGAGTaGATCATCTGGCAACATGGC +
Preference number: 5 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLQGFEE*IIWQHG
Trigger: GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTG...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGAACAATTTTCAACACTTaGTTCACTGATTACCCTGCT +
Preference number: 5 (lower is better)
Translates to: FQGLETVKLTPETLGCGRTIFNT*FTDYPA
Trigger: AGCAGGGTAATCAGTGAACAAAGTGTTGAAAATTGT...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGAGGTACCACAAAGAAATaGGATCTGCATTACTATGAA +
Preference number: 5 (lower is better)
Translates to: FQGLETVKLTPETLGCGRGTTKK*DLHYYE
Trigger: TTCATAGTAATGCAGATCCAATTTCTTTGTGGTACC...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATAGTCATGAACAGGTGTaGAGTGAATGGAAGACAGAG +
Preference number: 5 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDSHEQV*SEWKTE
Trigger: CTCTGTCTTCCATTCACTCAACACCTGTTCATGACT...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TTCCAGGGCCTAGAAACTGTGAAACTTACCCCAGAAACACTGGGTTGTGGGAGAATCCATTGCATAACATaGAGTAAGACATGCCTCATT +
Preference number: 5 (lower is better)
Translates to: FQGLETVKLTPETLGCGRIHCIT*SKTCLI
Trigger: AATGAGGCATGTCTTACTCAATGTTATGCAATGGAT...TCTCCCACAACCCAGTGTTTCTGGGGTAAGTTTCACAGTTTCTAGGCCCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACTCCTTGTCGATTCCTaGATGAGGGAACAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTLLVDS*MREQLH
Trigger: ATGCAGCTGTTCCCTCATCAAGGAATCGACAAGGAG...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456735.6
CDS-3UTR CAA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATTCCCCTTACCTCCATaGCTTCCTGAGCAATCTCTG +
Preference number: 5 (lower is better)
Translates to: HTISRNDIYLLLTETTHQFPLPP*LPEQSL
Trigger: CAGAGATTGCTCAGGAAGCAATGGAGGTAAGGGGAA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CAA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGTTTCATCTAATCTCATaGTGTCCTTTGGTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSFHLIS*CPLVAQ
Trigger: CTGGGCAACCAAAGGACACAATGAGATTAGATGAAA...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CAA 90 bp GATCCCAAGCCACCTGTTGCACTGGTTTTGATGAAACTGTCTAGTACAACATCATTTCATCTAATCTCATaGTGTCCTTTGGTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: DPKPPVALVLMKLSSTTSFHLIS*CPLVAQ
Trigger: CTGGGCAACCAAAGGACACAATGAGATTAGATGAAA...TGATGTTGTACTAGACAGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATCTGGCAGCAACTGTTaGACCAGCATCGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: HTISRNDIYLLLTETTHQSGSNC*TSIVSS
Trigger: AGATGAAACGATGCTGGTCAAACAGTTGCTGCCAGA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CAA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTCGACTAAAGACTGCATaGAAGTTGTTGCAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSRLKTA*KLLQLR
Trigger: TCTCAGCTGCAACAACTTCAATGCAGTCTTTAGTCG...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCGACTAAAGACTGCATaGAAGTTGTTGCAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRRLKTA*KLLQLR
Trigger: TCTCAGCTGCAACAACTTCAATGCAGTCTTTAGTCG...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAACTGCTGCTTTACGTTaGGTGCTTTCAGCAAAACCA +
Preference number: 5 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQETAALR*VLSAKP
Trigger: TGGTTTTGCTGAAAGCACCAAACGTAAAGCAGCAGT...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAATCCAATGCGGAATaGGTGATGATTCGATGGAGT +
Preference number: 5 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRQSNAE*VMIRWS
Trigger: ACTCCATCGAATCATCACCAATTCCGCATTGGATTG...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAACAATCCAATGCGGAATaGGTGATGATTCGATGGAGT +
Preference number: 5 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEQSNAE*VMIRWS
Trigger: ACTCCATCGAATCATCACCAATTCCGCATTGGATTG...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAGTGTGCTCCACAACCTaGCACTGCTTTATGAAGTGT +
Preference number: 5 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTVCSTT*HCFMKC
Trigger: ACACTTCATAAAGCAGTGCAAGGTTGTGGAGCACAC...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAGTGTGCTCCACAACCTaGCACTGCTTTATGAAGTGT +
Preference number: 5 (lower is better)
Translates to: HTISRNDIYLLLTETTHQVCSTT*HCFMKC
Trigger: ACACTTCATAAAGCAGTGCAAGGTTGTGGAGCACAC...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CAA 90 bp TTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCATCAGTGTGCTCCACAACCTaGCACTGCTTTATGAAGTGT +
Preference number: 5 (lower is better)
Translates to: LKPISHFQKPKLQQYLPSVCSTT*HCFMKC
Trigger: ACACTTCATAAAGCAGTGCAAGGTTGTGGAGCACAC...TGATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCTACTCTGAAGTATCTTaGACATTAACTTCAAGCCCC +
Preference number: 5 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGYSEVS*TLTSSP
Trigger: GGGGCTTGAAGTTAATGTCAAAGATACTTCAGAGTA...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATTGTAAAGCAAGCACATaGCCGTCACTTATGAAGGAA +
Preference number: 5 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDCKAST*PSLMKE
Trigger: TTCCTTCATAAGTGACGGCAATGTGCTTGCTTTACA...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp AAACGGTCCTGCAAACCGCCACAAGCCATTAAAACCAAAACTTTGCAGGTAAGAGGTATGCAAGAAGTGTaGCCATCTTATCAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: KRSCKPPQAIKTKTLQVRGMQEV*PSYQKV
Trigger: GACCTTTTGATAAGATGGCAACACTTCTTGCATACC...TCTTACCTGCAAAGTTTTGGTTTTAATGGCTTGTGGCGGTTTGCAGGACCGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAATCTGTTTTAAAGCGATaGCTAGGCCCGGTATGGGTA +
Preference number: 5 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKSVLKR*LGPVWV
Trigger: TACCCATACCGGGCCTAGCAATCGCTTTAAAACAGA...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAATGAAAACAAGCCTTTaGCTACCTTTGAGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEMKTSL*LPLRPV
Trigger: GACTGGCCTCAAAGGTAGCAAAAGGCTTGTTTTCAT...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TCCAGAGGATTCCGGATTGCCATAAATACTTCCTCTGGACTCTTGTCATTGAATATGAAAACAAGCCTTTaGCTACCTTTGAGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: SRGFRIAINTSSGLLSLNMKTSL*LPLRPV
Trigger: GACTGGCCTCAAAGGTAGCAAAAGGCTTGTTTTCAT...ATTCAATGACAAGAGTCCAGAGGAAGTATTTATGGCAATCCGGAATCCTCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTTTAAGTAATGCGATATaGAGCAGTGTCCCAGGGACA +
Preference number: 5 (lower is better)
Translates to: KSSNETALQETPLSPRFILSNAI*SSVPGT
Trigger: TGTCCCTGGGACACTGCTCAATATCGCATTACTTAA...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTTTAAGTAATGCGATATaGAGCAGTGTCCCAGGGACA +
Preference number: 5 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSLSNAI*SSVPGT
Trigger: TGTCCCTGGGACACTGCTCAATATCGCATTACTTAA...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCACAATAAAGAGGGTGTaGTTGGCAGGGATACATAAA +
Preference number: 5 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGTIKRV*LAGIHK
Trigger: TTTATGTATCCCTGCCAACAACACCCTCTTTATTGT...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GTAAGATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACACTCTGCACACAATAAAGAGGGTGTaGTTGGCAGGGATACATAAA +
Preference number: 5 (lower is better)
Translates to: VRCLVLWWGFFMVHHTLHTIKRV*LAGIHK
Trigger: TTTATGTATCCCTGCCAACAACACCCTCTTTATTGT...GTGCAGAGTGTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCTCCCCATATTTTTGCTaGAATAGATGGGTACATCTG +
Preference number: 5 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGSPYFC*NRWVHL
Trigger: CAGATGTACCCATCTATTCAAGCAAAAATATGGGGA...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ACCTTGCTTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTTCACCTCAGCTTTTATaGATCCCAAGCCACCTGTTG +
Preference number: 5 (lower is better)
Translates to: TLLETNFTFPEAKATAVSSPQLL*IPSHLL
Trigger: CAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTGA...AGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAAGCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp CTTGTCAAGAATAGCAGTAACTCTTTGTCGTTTGGCATCATCATTATGCTTGCAGCCACATCAAGGGAATaGTTGAAGGACAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: LVKNSSNSLSFGIIIMLAATSRE*LKDSIS
Trigger: GCTGATGCTGTCCTTCAACAATTCCCTTGATGTGGC...TGCAAGCATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTTGACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAATGACAGCAGCTGACTaGACTTTGCTAATGCCAAAC +
Preference number: 5 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEMTAAD*TLLMPN
Trigger: GTTTGGCATTAGCAAAGTCAAGTCAGCTGCTGTCAT...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ATCTTCGGATCAGTAAGTACTTCTTCATCCAAGAGAACATTTGATTCAGACACTCACTGGTCCAGCCACTaGCACGTTGGAATATCTCTC +
Preference number: 5 (lower is better)
Translates to: IFGSVSTSSSKRTFDSDTHWSSH*HVGISL
Trigger: GAGAGATATTCCAACGTGCAAGTGGCTGGACCAGTG...AGTGTCTGAATCAAATGTTCTCTTGGATGAAGAAGTACTTACTGATCCGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CAA 90 bp TGCAGGTTTTGTTCAAGAAGTGCGGTACCTGCTGAATACAAGTTGACCTCATCACAACTCTCAAGTGCCTaGCTAAGAATACGGATTATC +
Preference number: 5 (lower is better)
Translates to: CRFCSRSAVPAEYKLTSSQLSSA*LRIRII
Trigger: GATAATCCGTATTCTTAGCAAGGCACTTGAGAGTTG...TGATGAGGTCAACTTGTATTCAGCAGGTACCGCACTTCTTGAACAAAACCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp TCATGGTACACCACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGACCTGCTGAATACAAGTaGACCTCATCAAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SWYTTLCTIPWIGFNKFGPAEYK*TSSSCS
Trigger: GCTGCAGCTTGATGAGGTCAACTTGTATTCAGCAGG...TCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CAA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATACTTCCTCTGGACTCTaGTCATTGAATATACGGAGA +
Preference number: 5 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDTSSGL*SLNIRR
Trigger: TCTCCGTATATTCAATGACAAGAGTCCAGAGGAAGT...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCAACAAAATGATCCATTaGCTTGCAGTGCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRNKMIH*LAVPLQ
Trigger: CTGGAGTGGCACTGCAAGCAAATGGATCATTTTGTT...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTAACAAAATGATCCATTaGCTTGCAGTGCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: KSSNETALQETPLSPRFINKMIH*LAVPLQ
Trigger: CTGGAGTGGCACTGCAAGCAAATGGATCATTTTGTT...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAATTGCAGGTAAGATGTTaGGTATTGTGGTGGGGATTC +
Preference number: 5 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQELQVRC*VLWWGF
Trigger: GAATCCCCACCACAATACCAAACATCTTACCTGCAA...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCGAATTTGTGTTTGCTTaGAAAACGGTCCTGCAAACC +
Preference number: 5 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAEFVFA*KTVLQT
Trigger: GGTTTGCAGGACCGTTTTCAAAGCAAACACAAATTC...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCTTAGAAAGGTTAAGGTaGGCAGTGATACTAAGCTGG +
Preference number: 5 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHALERLR*AVILSW
Trigger: CCAGCTTAGTATCACTGCCAACCTTAACCTTTCTAA...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp AATATGAAGACTGATTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAAAGTTCAACGTTCTCCTaGTCGATTCCTGGGGAATGC +
Preference number: 5 (lower is better)
Translates to: NMKTDFQMKTGLADYLGQSSTFS*SIPGEC
Trigger: GCATTCCCCAGGAATCGACAAGGAGAACGTTGAACT...TTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAATCAGTCTTCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp CAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAATTTGGATGCAGCTTaGTCAGAGGCTGTTCTGATG +
Preference number: 5 (lower is better)
Translates to: QVWQITWGNELPFKEFGCNLDAA*SEAVLM
Trigger: CATCAGAACAGCCTCTGACAAAGCTGCATCCAAATT...GCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422121.2
ENST00000471572.6
CDS CCA 90 bp CTCAGTACTGACTTTGGTATGTGTGTTCTGCTGTCCTGTTTTTATTaGAAGCTTACGAGAGCTCCTGAAAGCAGCACTAAATATGGAAAG +
Preference number: 5 (lower is better)
Translates to: LSTDFGMCVLLSCFY*KLTRAPESSTKYGK
Trigger: CTTTCCATATTTAGTGCTGCTTTCAGGAGCTCTCGTAAGCTTCCAATAAAAACAGGACAGCAGAACACACATACCAAAGTCAGTACTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489712.6
CDS-3UTR CAA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAGCTGTCCTGTTTTTATaGGAAGCTGCTCGTCGAAGC +
Preference number: 5 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRAVLFL*EAARRS
Trigger: GCTTCGACGAGCAGCTTCCAATAAAAACAGGACAGC...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATTTGATTAGACATTCCTaGTTGTGCTCAGTACTGACT +
Preference number: 5 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDLIRHS*LCSVLT
Trigger: AGTCAGTACTGAGCACAACAAGGAATGTCTAATCAA...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TGCAGGTTTTGTTCAAGAAGTGCGGTACCTGCTGAATACAAGTTGACCTCATCATTGATTAGACATTCCTaGTTGTGCTCAGTACTGACT +
Preference number: 5 (lower is better)
Translates to: CRFCSRSAVPAEYKLTSSLIRHS*LCSVLT
Trigger: AGTCAGTACTGAGCACAACAAGGAATGTCTAATCAA...TGATGAGGTCAACTTGTATTCAGCAGGTACCGCACTTCTTGAACAAAACCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAATCTCATTGTGTCCTTaGGTTGCCCAGCAAGACATT +
Preference number: 5 (lower is better)
Translates to: HTISRNDIYLLLTETTHQISLCP*VAQQDI
Trigger: AATGTCTTGCTGGGCAACCAAAGGACACAATGAGAT...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CAA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTTTTCATCTAATCTCATaGTGTCCTTTGGTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSFHLIS*CPLVAQ
Trigger: CTGGGCAACCAAAGGACACAATGAGATTAGATGAAA...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp AGTTGTCATGGTGCCAATTTCACTATAGATGGTATATGCGAGAGCCTTACCTTCTTTCATCTAATCTCATaGTGTCCTTTGGTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: SCHGANFTIDGICESLTFFHLIS*CPLVAQ
Trigger: CTGGGCAACCAAAGGACACAATGAGATTAGATGAAA...GAAGGTAAGGCTCTCGCATATACCATCTATAGTGAAATTGGCACCATGACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CAA 90 bp ATAAATCATTCAGCTGATTCTGAACATCTCCATCTACAGGCAAACCATGAAGGATCTGGCAGCAACTGTTaGACCAGCATCGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: INHSADSEHLHLQANHEGSGSNC*TSIVSS
Trigger: AGATGAAACGATGCTGGTCAAACAGTTGCTGCCAGA...TCCTTCATGGTTTGCCTGTAGATGGAGATGTTCAGAATCAGCTGAATGATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CAA 90 bp GGTGCCAATTTCACTATAGATGGTATATGCGAGAGCCTTACCTTCCTGGCAAAAAAGACTGCATTGAAGTaGTTGCAGCTGAGAGAAAAT +
Preference number: 5 (lower is better)
Translates to: GANFTIDGICESLTFLAKKTALK*LQLREN
Trigger: ATTTTCTCTCAGCTGCAACAACTTCAATGCAGTCTT...TTTTGCCAGGAAGGTAAGGCTCTCGCATATACCATCTATAGTGAAATTGGCACC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CAA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAACGACTAAAGACTGCATaGAAGTTGTTGCAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: HTISRNDIYLLLTETTHQRLKTA*KLLQLR
Trigger: TCTCAGCTGCAACAACTTCAATGCAGTCTTTAGTCG...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CAA 90 bp GATGGTATATGCGAGAGCCTTACCTTCCTGGCAAAATTCTTTGAAAACTGTTCTCGACTAAAGACTGCATaGAAGTTGTTGCAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: DGICESLTFLAKFFENCSRLKTA*KLLQLR
Trigger: TCTCAGCTGCAACAACTTCAATGCAGTCTTTAGTCG...AGAACAGTTTTCAAAGAATTTTGCCAGGAAGGTAAGGCTCTCGCATATACCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CAA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAACTGCTGCTTTACGTTaGGTGCTTTCAGCAAAACCA +
Preference number: 5 (lower is better)
Translates to: HTISRNDIYLLLTETTHQTAALR*VLSAKP
Trigger: TGGTTTTGCTGAAAGCACCAAACGTAAAGCAGCAGT...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CAA 90 bp TTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCATCAACTGCTGCTTTACGTTaGGTGCTTTCAGCAAAACCA +
Preference number: 5 (lower is better)
Translates to: LKPISHFQKPKLQQYLPSTAALR*VLSAKP
Trigger: TGGTTTTGCTGAAAGCACCAAACGTAAAGCAGCAGT...TGATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCTCATCAACCACGTCTTaGGATATATCCTGGATTATT +
Preference number: 5 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGSSTTS*DISWII
Trigger: AATAATCCAGGATATATCCAAAGACGTGGTTGATGA...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAACAATCCAATGCGGAATaGGTGATGATTCGATGGAGT +
Preference number: 5 (lower is better)
Translates to: HTISRNDIYLLLTETTHQQSNAE*VMIRWS
Trigger: ACTCCATCGAATCATCACCAATTCCGCATTGGATTG...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CAA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCTACTCTGAAGTATCTTaGACATTAACTTCAAGCCCC +
Preference number: 5 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAYSEVS*TLTSSP
Trigger: GGGGCTTGAAGTTAATGTCAAAGATACTTCAGAGTA...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GTGGTATATTTTACCAGTGTAGCTAGAACAGTAAGAAGCAGCGCCTGGATCTTCTACTCTGAAGTATCTTaGACATTAACTTCAAGCCCC +
Preference number: 5 (lower is better)
Translates to: VVYFTSVARTVRSSAWIFYSEVS*TLTSSP
Trigger: GGGGCTTGAAGTTAATGTCAAAGATACTTCAGAGTA...GAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACTGGTAAAATATACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAATGAAAACAAGCCTTTaGCTACCTTTGAGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTMKTSL*LPLRPV
Trigger: GACTGGCCTCAAAGGTAGCAAAAGGCTTGTTTTCAT...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTAATTGCCCTAGGACTTTaGTTCGCTCTGCTGAAGTTA +
Preference number: 5 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLIALGL*FALLKL
Trigger: TAACTTCAGCAGAGCGAACAAAAGTCCTAGGGCAAT...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTATCCCAGGGACATCTTTaGGCCGAATCTTGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLSQGHL*AESWCV
Trigger: AACACACCAAGATTCGGCCAAAAGATGTCCCTGGGA...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAATTAAGTAATGCGATATaGAGCAGTGTCCCAGGGACA +
Preference number: 5 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKLSNAI*SSVPGT
Trigger: TGTCCCTGGGACACTGCTCAATATCGCATTACTTAA...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATTCCCCATATTTTTGCTaGAATAGATGGGTACATCTG +
Preference number: 5 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDSPYFC*NRWVHL
Trigger: CAGATGTACCCATCTATTCAAGCAAAAATATGGGGA...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GGCAGCATTAAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCGGAGATAAGCATGTCTaGTCAATTATTTTGCACATC +
Preference number: 5 (lower is better)
Translates to: GSIKFRQGFEELIIWQHGGDKHV*SIILHI
Trigger: GATGTGCAAAATAATTGACAAGACATGCTTATCTCC...GCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTTAATGCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAACATCAAGGGAATTGTaGAAGGACAGCATCAGCATG +
Preference number: 5 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKTSREL*KDSISM
Trigger: CATGCTGATGCTGTCCTTCAACAATTCCCTTGATGT...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAACATCAAGGGAATTGTaGAAGGACAGCATCAGCATG +
Preference number: 5 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTTSREL*KDSISM
Trigger: CATGCTGATGCTGTCCTTCAACAATTCCCTTGATGT...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTGCCACATCAAGGGAATaGTTGAAGGACAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSATSRE*LKDSIS
Trigger: GCTGATGCTGTCCTTCAACAATTCCCTTGATGTGGC...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TCTGGAATTTGTGTTTGCTTTGAAAACGGTCCTGCAAACCGCCACAAGCCATTACAGGGATGGATTATATaGGAATGCAAATCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: SGICVCFENGPANRHKPLQGWII*ECKSLS
Trigger: GCTCAAAGATTTGCATTCCAATATAATCCATCCCTG...TAATGGCTTGTGGCGGTTTGCAGGACCGTTTTCAAAGCAAACACAAATTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCAACAAGAGCTCTTGGTaGCAGGGATGGATTATATTG +
Preference number: 5 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRNKSSW*QGWIIL
Trigger: CAATATAATCCATCCCTGCAACCAAGAGCTCTTGTT...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAACTCTCAAGTGCCTaGCTAAGAATACGGATTATC +
Preference number: 5 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRQLSSA*LRIRII
Trigger: GATAATCCGTATTCTTAGCAAGGCACTTGAGAGTTG...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTCTATCAGAACTaGACTGTTGTAAGTGTCAGG +
Preference number: 5 (lower is better)
Translates to: QVWQITWGNELPFKEFGCSFYQN*TVVSVR
Trigger: CCTGACACTTACAACAGTCAAGTTCTGATAGAAGCT...GCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp ACAAATTATGCACAACAGGAAAGACTTTGGGAAACACAACACTGGCCTCTGCTAAGCTTCTATCAGAACTaGACTGTTGTAAGTGTCAGG +
Preference number: 5 (lower is better)
Translates to: TNYAQQERLWETQHWPLLSFYQN*TVVSVR
Trigger: CCTGACACTTACAACAGTCAAGTTCTGATAGAAGCT...TAGCAGAGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGTGCATAATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp GTAAGATGTTTGGTATTGTGGTGGGGATTCTTCATGGTACACCACACTCTGCACAGAAGTGGCTGTAATTaGGTTAGTGCTATTACTGTA +
Preference number: 5 (lower is better)
Translates to: VRCLVLWWGFFMVHHTLHRSGCN*VSAITV
Trigger: TACAGTAATAGCACTAACCAAATTACAGCCACTTCT...GTGCAGAGTGTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCCTGCTGAATACAAGTaGACCTCATCAAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VEFNLLKSSNETALQETPPAEYK*TSSSCS
Trigger: GCTGCAGCTTGATGAGGTCAACTTGTATTCAGCAGG...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp ACTGGTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAAACTTCCTCTGGACTCTaGTCATTGAATATACGGAGA +
Preference number: 5 (lower is better)
Translates to: TGFFINSRQVRVNQGIKKTSSGL*SLNIRR
Trigger: TCTCCGTATATTCAATGACAAGAGTCCAGAGGAAGT...TTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAACCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CAA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAACAAAATGATCCATTaGCTTGCAGTGCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLNKMIH*LAVPLQ
Trigger: CTGGAGTGGCACTGCAAGCAAATGGATCATTTTGTT...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp AATATGAAGACTGATTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAAACAACAGGAAAGACTTaGGGAAACACAACACTGGCC +
Preference number: 5 (lower is better)
Translates to: NMKTDFQMKTGLADYLGQTTGKT*GNTTLA
Trigger: GGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGT...TTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAATCAGTCTTCATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp AGTGTAGCTAGAACAGTAAGAAGCAGCGCCTGGATCTTCGGATCAGTAAGTACTAATGATAACAGGGTGTaGATCTTAGAGTCCAACAAA +
Preference number: 5 (lower is better)
Translates to: SVARTVRSSAWIFGSVSTNDNRV*ILESNK
Trigger: TTTGTTGGACTCTAAGATCAACACCCTGTTATCATT...AGTACTTACTGATCCGAAGATCCAGGCGCTGCTTCTTACTGTTCTAGCTACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CAA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTGTAAGATGTTTGGTATaGTGGTGGGGATTCTTCATG +
Preference number: 5 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSVRCLV*WWGFFM
Trigger: CATGAAGAATCCCCACCACAATACCAAACATCTTAC...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTGTAAGATGTTTGGTATaGTGGTGGGGATTCTTCATG +
Preference number: 5 (lower is better)
Translates to: KSSNETALQETPLSPRFIVRCLV*WWGFFM
Trigger: CATGAAGAATCCCCACCACAATACCAAACATCTTAC...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp CAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCGTAAGATGTTTGGTATaGTGGTGGGGATTCTTCATG +
Preference number: 5 (lower is better)
Translates to: QVWQITWGNELPFKEFGCVRCLV*WWGFFM
Trigger: CATGAAGAATCCCCACCACAATACCAAACATCTTAC...GCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAATTGCAGGTAAGATGTTaGGTATTGTGGTGGGGATTC +
Preference number: 5 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKLQVRC*VLWWGF
Trigger: GAATCCCCACCACAATACCAAACATCTTACCTGCAA...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTATTGCAGGTAAGATGTTaGGTATTGTGGTGGGGATTC +
Preference number: 5 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLLQVRC*VLWWGF
Trigger: GAATCCCCACCACAATACCAAACATCTTACCTGCAA...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp AGGGTGTTGATCTTAGAGTCCAACAAATTATGCACAACAGGAAAGACTTTGGGATTGCAGGTAAGATGTTaGGTATTGTGGTGGGGATTC +
Preference number: 5 (lower is better)
Translates to: RVLILESNKLCTTGKTLGLQVRC*VLWWGF
Trigger: GAATCCCCACCACAATACCAAACATCTTACCTGCAA...TCCCAAAGTCTTTCCTGTTGTGCATAATTTGTTGGACTCTAAGATCAACACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CAA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGAATTTGTGTTTGCTTaGAAAACGGTCCTGCAAACC +
Preference number: 5 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEEFVFA*KTVLQT
Trigger: GGTTTGCAGGACCGTTTTCAAAGCAAACACAAATTC...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ACAAATTATGCACAACAGGAAAGACTTTGGGAAACACAACACTGGCCTCTGCTATTAGAAAGGTTAAGGTaGGCAGTGATACTAAGCTGG +
Preference number: 5 (lower is better)
Translates to: TNYAQQERLWETQHWPLLLERLR*AVILSW
Trigger: CCAGCTTAGTATCACTGCCAACCTTAACCTTTCTAA...TAGCAGAGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGTGCATAATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp AGGAGCAAAATTTGCTATAAACTGATCACAAGGGAATTCCTAATGTTGGTGTCTGGGAATGCTGGGAAGTaGCAAGTGAGGTCATGGAAT +
Preference number: 5 (lower is better)
Translates to: RSKICYKLITREFLMLVSGNAGK*QVRSWN
Trigger: ATTCCATGACCTCACTTGCAACTTCCCAGCATTCCC...AGACACCAACATTAGGAATTCCCTTGTGATCAGTTTATAGCAAATTTTGCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468273.1
CDS-3UTR CAA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAAGTTCAACGTTCTCCTaGTCGATTCCTGGGGAATGC +
Preference number: 5 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRSSTFS*SIPGEC
Trigger: GCATTCCCCAGGAATCGACAAGGAGAACGTTGAACT...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTACAAATGAAGACAGGTTaGGCAGATTACTTGGGGCAA +
Preference number: 5 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLQMKTG*ADYLGQ
Trigger: TTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTG...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422121.2
ENST00000471572.6
CDS-3UTR CAA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGAAACAGCAAGAAATGTaGAGACCCAATCATGTCTAC +
Preference number: 5 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSKQQEM*RPNHVY
Trigger: GTAGACATGATTGGGTCTCAACATTTCTTGCTGTTT...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CAA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGGCGTTTCCTAAGGCCTaGAAATTAAGTTTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSAFPKA*KLSFFA
Trigger: TGCAAAGAAACTTAATTTCAAGGCCTTAGGAAACGC...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS CCA 90 bp ACTCAAAAAGGGGAAATCCTTACTAGAACAGTAAGAAGCAGCGCCTaGATCTTCGGATCAGTAAGTACTTCTTCATCCAAGAGAACATTT +
Preference number: 5 (lower is better)
Translates to: TQKGEILTRTVRSSA*IFGSVSTSSSKRTF
Trigger: AAATGTTCTCTTGGATGAAGAAGTACTTACTGATCCGAAGATCCAGGCGCTGCTTCTTACTGTTCTAGTAAGGATTTCCCCTTTTTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577967.1
CDS-3UTR CAA 90 bp CATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCAAGAATAGCAGTAACGCTGTCCTGTTTTTATaGGAAGCTGCTCGTCGAAGC +
Preference number: 5 (lower is better)
Translates to: HLFFIDGHCYQLVKNSSNAVLFL*EAARRS
Trigger: GCTTCGACGAGCAGCTTCCAATAAAAACAGGACAGC...GTTACTGCTATTCTTGACAAGCTGATAACAATGACCATCAATGAAAAACAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTATCTCATTGTGTCCTTaGGTTGCCCAGCAAGACATT +
Preference number: 5 (lower is better)
Translates to: IISGHKIRRMICSGQTAAISLCP*VAQQDI
Trigger: AATGTCTTGCTGGGCAACCAAAGGACACAATGAGAT...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CAA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATTTCATCTAATCTCATaGTGTCCTTTGGTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: HTISRNDIYLLLTETTHQFHLIS*CPLVAQ
Trigger: CTGGGCAACCAAAGGACACAATGAGATTAGATGAAA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CAA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTATCTGGCAGCAACTGTTaGACCAGCATCGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLSGSNC*TSIVSS
Trigger: AGATGAAACGATGCTGGTCAAACAGTTGCTGCCAGA...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTCAATCCAATGCGGAATaGGTGATGATTCGATGGAGT +
Preference number: 5 (lower is better)
Translates to: IISGHKIRRMICSGQTAAQSNAE*VMIRWS
Trigger: ACTCCATCGAATCATCACCAATTCCGCATTGGATTG...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CAA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTGTGTGCTCCACAACCTaGCACTGCTTTATGAAGTGT +
Preference number: 5 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSVCSTT*HCFMKC
Trigger: ACACTTCATAAAGCAGTGCAAGGTTGTGGAGCACAC...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAGTGTGCTCCACAACCTaGCACTGCTTTATGAAGTGT +
Preference number: 5 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRVCSTT*HCFMKC
Trigger: ACACTTCATAAAGCAGTGCAAGGTTGTGGAGCACAC...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTAGTGTGCTCCACAACCTaGCACTGCTTTATGAAGTGT +
Preference number: 5 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLVCSTT*HCFMKC
Trigger: ACACTTCATAAAGCAGTGCAAGGTTGTGGAGCACAC...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CAA 90 bp AAGCATGTCTTGTCAATTATTTTGCACATCCTTCCAATAACCTTGCTTGAAACCTCTGTTTTAAAGCGATaGCTAGGCCCGGTATGGGTA +
Preference number: 5 (lower is better)
Translates to: KHVLSIILHILPITLLETSVLKR*LGPVWV
Trigger: TACCCATACCGGGCCTAGCAATCGCTTTAAAACAGA...GGTTTCAAGCAAGGTTATTGGAAGGATGTGCAAAATAATTGACAAGACATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp TTGGCATCATCATTATGCTTGCAAAAACGAACTAGATTTGACAGCCATGGAGTCATAAAGAGGGTGTTGTaGGCAGGGATACATAAACCT +
Preference number: 5 (lower is better)
Translates to: LASSLCLQKRTRFDSHGVIKRVL*AGIHKP
Trigger: AGGTTTATGTATCCCTGCCAACAACACCCTCTTTAT...GACTCCATGGCTGTCAAATCTAGTTCGTTTTTGCAAGCATAATGATGATGCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp AAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCTCTCCCCTAGGTTTATTAAAAACGAACTAGATTaGACAGCCATGGAGTCATGT +
Preference number: 5 (lower is better)
Translates to: KSSNETALQETPLSPRFIKNELD*TAMESC
Trigger: ACATGACTCCATGGCTGTCAAATCTAGTTCGTTTTT...AATAAACCTAGGGGAGAGGGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCAAAAACGAACTAGATTaGACAGCCATGGAGTCATGT +
Preference number: 5 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRKNELD*TAMESC
Trigger: ACATGACTCCATGGCTGTCAAATCTAGTTCGTTTTT...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCGTAACTCTTTGTCGTTaGGCATCATCATTATGCTTG +
Preference number: 5 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRVTLCR*ASSLCL
Trigger: CAAGCATAATGATGATGCCAAACGACAAAGAGTTAC...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ACCTCAGCTTTTATTGATCCCAAGCCACCTGTTGCACTGGTTTTGATGAAACTGAATAGCAGTAACTCTTaGTCGTTTGGCATCATCATT +
Preference number: 5 (lower is better)
Translates to: TSAFIDPKPPVALVLMKLNSSNS*SFGIII
Trigger: AATGATGATGCCAAACGACAAAGAGTTACTGCTATT...CAGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGATCAATAAAAGCTGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACCTGTTGCACTGGTTTaGATGAAACTGTCTAGTACA +
Preference number: 5 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTPVALV*MKLSST
Trigger: TGTACTAGACAGTTTCATCAAAACCAGTGCAACAGG...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCATCCTTCCAATAACCTaGCTTGAAACCAATTTCACA +
Preference number: 5 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAILPIT*LETNFT
Trigger: TGTGAAATTGGTTTCAAGCAAGGTTATTGGAAGGAT...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCGTCTTGTCAATTATTTaGCACATCCTTCCAATAACC +
Preference number: 5 (lower is better)
Translates to: PPTFFAVVLNTYIYQIHAVLSII*HILPIT
Trigger: GGTTATTGGAAGGATGTGCAAAATAATTGACAAGAC...GGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ACCTCAGCTTTTATTGATCCCAAGCCACCTGTTGCACTGGTTTTGATGAAACTGGTCTTGTCAATTATTTaGCACATCCTTCCAATAACC +
Preference number: 5 (lower is better)
Translates to: TSAFIDPKPPVALVLMKLVLSII*HILPIT
Trigger: GGTTATTGGAAGGATGTGCAAAATAATTGACAAGAC...CAGTTTCATCAAAACCAGTGCAACAGGTGGCTTGGGATCAATAAAAGCTGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp AAATTTAGGCAAGGCTTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGAGATAAGCATGTCTaGTCAATTATTTTGCACATC +
Preference number: 5 (lower is better)
Translates to: KFRQGFEELIIWQHGKPDGDKHV*SIILHI
Trigger: GATGTGCAAAATAATTGACAAGACATGCTTATCTCC...ATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAAGCCTTGCCTAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp AGTTACAGTTATAGATATAGACTGCGGAGACGTTGTCGTAAGCAAAGCCAGGAAACTGAGTCTCAAAACTaGCTTGGTCTCTTCACTAAA +
Preference number: 5 (lower is better)
Translates to: SYSYRYRLRRRCRKQSQETESQN*LGLFTK
Trigger: TTTAGTGAAGAGACCAAGCAAGTTTTGAGACTCAGT...TTCCTGGCTTTGCTTACGACAACGTCTCCGCAGTCTATATCTATAACTGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp TGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTTAACAAGAGCTCTTGGTaGCAGGGATGGATTATATTG +
Preference number: 5 (lower is better)
Translates to: WQITWGNELPFKEFGCSFNKSSW*QGWIIL
Trigger: CAATATAATCCATCCCTGCAACCAAGAGCTCTTGTT...AAAGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAACTCTCAAGTGCCTaGCTAAGAATACGGATTATC +
Preference number: 5 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKQLSSA*LRIRII
Trigger: GATAATCCGTATTCTTAGCAAGGCACTTGAGAGTTG...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTACAACTCTCAAGTGCCTaGCTAAGAATACGGATTATC +
Preference number: 5 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLQLSSA*LRIRII
Trigger: GATAATCCGTATTCTTAGCAAGGCACTTGAGAGTTG...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp ACAAATTATGCACAACAGGAAAGACTTTGGGAAACACAACACTGGCCTCTGCTATCTGGACTCTTGTCATaGAATATACGGAGACTATCT +
Preference number: 5 (lower is better)
Translates to: TNYAQQERLWETQHWPLLSGLLS*NIRRLS
Trigger: AGATAGTCTCCGTATATTCAATGACAAGAGTCCAGA...TAGCAGAGGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGTGCATAATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CAA 90 bp AGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAACTTCCTCTGGACTCTaGTCATTGAATATACGGAGA +
Preference number: 5 (lower is better)
Translates to: RFGRLLGAMNCPLKNLDATSSGL*SLNIRR
Trigger: TCTCCGTATATTCAATGACAAGAGTCCAGAGGAAGT...TGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp CTTCATGGTACACCACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGAACAAAATGATCCATTaGCTTGCAGTGCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: LHGTPHSAQFHGLDLTNLNKMIH*LAVPLQ
Trigger: CTGGAGTGGCACTGCAAGCAAATGGATCATTTTGTT...CAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGTGGTGTACCATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CAA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCACAACAGGAAAGACTTaGGGAAACACAACACTGGCC +
Preference number: 5 (lower is better)
Translates to: VEFNLLKSSNETALQETPTTGKT*GNTTLA
Trigger: GGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGT...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TGGCCTCTGCTAAGTATTCATAAAGAATTCGTTGATCAAACTCATCTGTGGTATACAACAGGAAAGACTTaGGGAAACACAACACTGGCC +
Preference number: 5 (lower is better)
Translates to: WPLLSIHKEFVDQTHLWYTTGKT*GNTTLA
Trigger: GGCCAGTGTTGTGTTTCCCAAAGTCTTTCCTGTTGT...ATACCACAGATGAGTTTGATCAACGAATTCTTTATGAATACTTAGCAGAGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CAA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAGTAAGATGTTTGGTATaGTGGTGGGGATTCTTCATG +
Preference number: 5 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKVRCLV*WWGFFM
Trigger: CATGAAGAATCCCCACCACAATACCAAACATCTTAC...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTTGAATTTGTGTTTGCTTaGAAAACGGTCCTGCAAACC +
Preference number: 5 (lower is better)
Translates to: WQITWGNELPFKEFGCSFEFVFA*KTVLQT
Trigger: GGTTTGCAGGACCGTTTTCAAAGCAAACACAAATTC...AAAGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTATTAGAAAGGTTAAGGTaGGCAGTGATACTAAGCTGG +
Preference number: 5 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLLERLR*AVILSW
Trigger: CCAGCTTAGTATCACTGCCAACCTTAACCTTTCTAA...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAATTAGAAAGGTTAAGGTaGGCAGTGATACTAAGCTGG +
Preference number: 5 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKLERLR*AVILSW
Trigger: CCAGCTTAGTATCACTGCCAACCTTAACCTTTCTAA...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp AGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCATTAGAAAGGTTAAGGTaGGCAGTGATACTAAGCTGG +
Preference number: 5 (lower is better)
Translates to: RFGRLLGAMNCPLKNLDALERLR*AVILSW
Trigger: CCAGCTTAGTATCACTGCCAACCTTAACCTTTCTAA...TGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp ATAGATGGGTACATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCAAGAGGGAATGCTGGGAAGTaGCAAGTGAGGTCATGGAAT +
Preference number: 5 (lower is better)
Translates to: IDGYICFSLMVIVISLSRGNAGK*QVRSWN
Trigger: ATTCCATGACCTCACTTGCAACTTCCCAGCATTCCC...TCTTGACAAGCTGATAACAATGACCATCAATGAAAAACAGATGTACCCATCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAATTAATGCTATTACGTTaGAAACTGCCAGCGCTTCTT +
Preference number: 5 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQELMLLR*KLPALL
Trigger: AAGAAGCGCTGGCAGTTTCAAACGTAATAGCATTAA...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTTTTGCCCTTTAAAGAATTaGGATGCAGCTTTGTCAGAG +
Preference number: 5 (lower is better)
Translates to: WQITWGNELPFKEFGCSFCPLKN*DAALSE
Trigger: CTCTGACAAAGCTGCATCCAAATTCTTTAAAGGGCA...AAAGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422121.2
ENST00000471572.6
CDS-3UTR CAA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTATGCCCTTTAAAGAATTaGGATGCAGCTTTGTCAGAG +
Preference number: 5 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLCPLKN*DAALSE
Trigger: CTCTGACAAAGCTGCATCCAAATTCTTTAAAGGGCA...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422121.2
ENST00000471572.6
CDS-3UTR CAA 90 bp ATACACAGCATCAATCTTAGGCCACCAATCCAATGCGGAATTGGTGATGATTCGGAATACAGCCCAAACTaGAGAAGATATTCACTGTAT +
Preference number: 5 (lower is better)
Translates to: IHSINLRPPIQCGIGDDSEYSPN*RRYSLY
Trigger: ATACAGTGAATATCTTCTCAAGTTTGGGCTGTATTC...CGAATCATCACCAATTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS TCA 90 bp GGTGTCTTATATTGTTGCTCAAAGTCATATAAAGATCACATTTACTaGCCTGGGGAATGCTGGGAAGTTGCAAGTGAGGTCATGGAATTA +
Preference number: 5 (lower is better)
Translates to: GVLYCCSKSYKDHIY*PGECWEVASEVMEL
Trigger: TAATTCCATGACCTCACTTGCAACTTCCCAGCATTCCCCAGGTCAGTAAATGTGATCTTTATATGACTTTGAGCAACAATATAAGACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468273.1
ENST00000577967.1
CDS CCA 90 bp CACCCAAAGACAACAAGAGCTCTTGGTTGCAGGGATGGATTATATTaGAATGCAAATCTGCAATTAAAAGATCCACAGAACTTTGAGCTA +
Preference number: 5 (lower is better)
Translates to: HPKTTRALGCRDGLY*NANLQLKDPQNFEL
Trigger: TAGCTCAAAGTTCTGTGGATCTTTTAATTGCAGATTTGCATTCCAATATAATCCATCCCTGCAACCAAGAGCTCTTGTTGTCTTTGGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS CCA 90 bp TACTTCCAGATTTTCAGGATGGTCTATGGATGGTTGAGTTATTGCTaGCAGCAGGAAAGTGAGGTACCTAATAGATTTTGTGTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: YFQIFRMVYGWLSYC*QQESEVPNRFCVSS
Trigger: AGAAGAAACACAAAATCTATTAGGTACCTCACTTTCCTGCTGCCAGCAATAACTCAACCATCCATAGACCATCCTGAAAATCTGGAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577967.1
CDS-3UTR CAA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAATTAGACATTCCTTGTaGTGCTCAGTACTGACTTTG +
Preference number: 5 (lower is better)
Translates to: HTISRNDIYLLLTETTHQIRHSL*CSVLTL
Trigger: CAAAGTCAGTACTGAGCACAACAAGGAATGTCTAAT...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CAA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATTGATTAGACATTCCTaGTTGTGCTCAGTACTGACT +
Preference number: 5 (lower is better)
Translates to: HTISRNDIYLLLTETTHQLIRHS*LCSVLT
Trigger: AGTCAGTACTGAGCACAACAAGGAATGTCTAATCAA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CAA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAATCTCATTGTGTCCTTaGGTTGCCCAGCAAGACATT +
Preference number: 5 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRISLCP*VAQQDI
Trigger: AATGTCTTGCTGGGCAACCAAAGGACACAATGAGAT...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTATCTCATTGTGTCCTTaGGTTGCCCAGCAAGACATT +
Preference number: 5 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSISLCP*VAQQDI
Trigger: AATGTCTTGCTGGGCAACCAAAGGACACAATGAGAT...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TATCAGCTTGTCAAGAATAGCAGTAACTCTTTGTCGTTTGGCATCATCATTATGATCTCATTGTGTCCTTaGGTTGCCCAGCAAGACATT +
Preference number: 5 (lower is better)
Translates to: YQLVKNSSNSLSFGIIIMISLCP*VAQQDI
Trigger: AATGTCTTGCTGGGCAACCAAAGGACACAATGAGAT...CATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTTGACAAGCTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGATCTGGCAGCAACTGTTaGACCAGCATCGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRSGSNC*TSIVSS
Trigger: AGATGAAACGATGCTGGTCAAACAGTTGCTGCCAGA...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAAAGACTGCATTGAAGTaGTTGCAGCTGAGAGAAAAT +
Preference number: 5 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTKTALK*LQLREN
Trigger: ATTTTCTCTCAGCTGCAACAACTTCAATGCAGTCTT...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAAAAGACTGCATTGAAGTaGTTGCAGCTGAGAGAAAAT +
Preference number: 5 (lower is better)
Translates to: HTISRNDIYLLLTETTHQKTALK*LQLREN
Trigger: ATTTTCTCTCAGCTGCAACAACTTCAATGCAGTCTT...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CAA 90 bp TCATTGAATATACGGAGACTATCTAAAGTATGCAGGTTTTGTTCAAGAAGTGCGCGACTAAAGACTGCATaGAAGTTGTTGCAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: SLNIRRLSKVCRFCSRSARLKTA*KLLQLR
Trigger: TCTCAGCTGCAACAACTTCAATGCAGTCTTTAGTCG...CGCACTTCTTGAACAAAACCTGCATACTTTAGATAGTCTCCGTATATTCAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCACTGCTGCTTTACGTTaGGTGCTTTCAGCAAAACCA +
Preference number: 5 (lower is better)
Translates to: VEFNLLKSSNETALQETPTAALR*VLSAKP
Trigger: TGGTTTTGCTGAAAGCACCAAACGTAAAGCAGCAGT...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCTCATCAACCACGTCTTaGGATATATCCTGGATTATT +
Preference number: 5 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRSSTTS*DISWII
Trigger: AATAATCCAGGATATATCCAAAGACGTGGTTGATGA...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACATACTCTGAAGTATCTTaGACATTAACTTCAAGCCCC +
Preference number: 5 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTYSEVS*TLTSSP
Trigger: GGGGCTTGAAGTTAATGTCAAAGATACTTCAGAGTA...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAATTGCCCTAGGACTTTaGTTCGCTCTGCTGAAGTTA +
Preference number: 5 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRIALGL*FALLKL
Trigger: TAACTTCAGCAGAGCGAACAAAAGTCCTAGGGCAAT...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGATCTTGGCACAATATTGCCCTAGGACTTTaGTTCGCTCTGCTGAAGTTA +
Preference number: 5 (lower is better)
Translates to: TLCTIPWIGFNKFGSWHNIALGL*FALLKL
Trigger: TAACTTCAGCAGAGCGAACAAAAGTCCTAGGGCAAT...ATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAACAATAAAGAGGGTGTaGTTGGCAGGGATACATAAA +
Preference number: 5 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKTIKRV*LAGIHK
Trigger: TTTATGTATCCCTGCCAACAACACCCTCTTTATTGT...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAGTAACTCTTTGTCGTTaGGCATCATCATTATGCTTG +
Preference number: 5 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKVTLCR*ASSLCL
Trigger: CAAGCATAATGATGATGCCAAACGACAAAGAGTTAC...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CCTGTTGCACTGGTTTTGATGAAACTGTCTAGTACAACATCAAGCAGATCTGTAGTAACTCTTTGTCGTTaGGCATCATCATTATGCTTG +
Preference number: 5 (lower is better)
Translates to: PVALVLMKLSSTTSSRSVVTLCR*ASSLCL
Trigger: CAAGCATAATGATGATGCCAAACGACAAAGAGTTAC...TACAGATCTGCTTGATGTTGTACTAGACAGTTTCATCAAAACCAGTGCAACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTAATAGCAGTAACTCTTaGTCGTTTGGCATCATCATT +
Preference number: 5 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSNSSNS*SFGIII
Trigger: AATGATGATGCCAAACGACAAAGAGTTACTGCTATT...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CTTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTGCCATCAATAGCAGTAACTCTTaGTCGTTTGGCATCATCATT +
Preference number: 5 (lower is better)
Translates to: LETNFTFPEAKATAVSAINSSNS*SFGIII
Trigger: AATGATGATGCCAAACGACAAAGAGTTACTGCTATT...GATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTCATTGTTATCAGCTaGTCAAGAATAGCAGTAACT +
Preference number: 5 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQEVIVIS*SRIAVT
Trigger: AGTTACTGCTATTCTTGACAAGCTGATAACAATGAC...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGATCACCTCAGCTTTTATaGATCCCAAGCCACCTGTTG +
Preference number: 5 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRSPQLL*IPSHLL
Trigger: CAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTGA...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp CATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCAAGAATAGCAGTAACTCACCTCAGCTTTTATaGATCCCAAGCCACCTGTTG +
Preference number: 5 (lower is better)
Translates to: HLFFIDGHCYQLVKNSSNSPQLL*IPSHLL
Trigger: CAACAGGTGGCTTGGGATCAATAAAAGCTGAGGTGA...GTTACTGCTATTCTTGACAAGCTGATAACAATGACCATCAATGAAAAACAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTATCCTTCCAATAACCTaGCTTGAAACCAATTTCACA +
Preference number: 5 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSILPIT*LETNFT
Trigger: TGTGAAATTGGTTTCAAGCAAGGTTATTGGAAGGAT...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAGTGTCTTGTCAATTATTTaGCACATCCTTCCAATAACC +
Preference number: 5 (lower is better)
Translates to: VDHLATWQTGWVHYKTGSVLSII*HILPIT
Trigger: GGTTATTGGAAGGATGTGCAAAATAATTGACAAGAC...ACTTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ATCTTCGGATCAGTAAGTACTTCTTCATCCAAGAGAACATTTGATTCAGACACTACATCAAGGGAATTGTaGAAGGACAGCATCAGCATG +
Preference number: 5 (lower is better)
Translates to: IFGSVSTSSSKRTFDSDTTSREL*KDSISM
Trigger: CATGCTGATGCTGTCCTTCAACAATTCCCTTGATGT...AGTGTCTGAATCAAATGTTCTCTTGGATGAAGAAGTACTTACTGATCCGAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTAACTGAGTCTCAAAACTaGCTTGGTCTCTTCACTAAA +
Preference number: 5 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLTESQN*LGLFTK
Trigger: TTTAGTGAAGAGACCAAGCAAGTTTTGAGACTCAGT...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTAATGACAGCAGCTGACTaGACTTTGCTAATGCCAAAC +
Preference number: 5 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLMTAAD*TLLMPN
Trigger: GTTTGGCATTAGCAAAGTCAAGTCAGCTGCTGTCAT...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAATGACAGCAGCTGACTaGACTTTGCTAATGCCAAAC +
Preference number: 5 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRMTAAD*TLLMPN
Trigger: GTTTGGCATTAGCAAAGTCAAGTCAGCTGCTGTCAT...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCAGAAGTGGCTGTAATTaGGTTAGTGCTATTACTGTA +
Preference number: 5 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRRSGCN*VSAITV
Trigger: TACAGTAATAGCACTAACCAAATTACAGCCACTTCT...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAAATGATAACAGGGTGTaGATCTTAGAGTCCAACAAA +
Preference number: 5 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQENDNRV*ILESNK
Trigger: TTTGTTGGACTCTAAGATCAACACCCTGTTATCATT...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTTTGCAGGTAAGATGTTaGGTATTGTGGTGGGGATTC +
Preference number: 5 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSLQVRC*VLWWGF
Trigger: GAATCCCCACCACAATACCAAACATCTTACCTGCAA...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CTGATCACAAGGGAATTCCTAATGTTGGTGTCTTATATTGTTGCTCAAAGTCATTTGCAGGTAAGATGTTaGGTATTGTGGTGGGGATTC +
Preference number: 5 (lower is better)
Translates to: LITREFLMLVSYIVAQSHLQVRC*VLWWGF
Trigger: GAATCCCCACCACAATACCAAACATCTTACCTGCAA...ATGACTTTGAGCAACAATATAAGACACCAACATTAGGAATTCCCTTGTGATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468273.1
CDS-3UTR CAA 90 bp AACAAATTTGGATCTTGGCACAATGATAACAGGGTGTTGATCTTAGAGTCCAACGAATTTGTGTTTGCTTaGAAAACGGTCCTGCAAACC +
Preference number: 5 (lower is better)
Translates to: NKFGSWHNDNRVLILESNEFVFA*KTVLQT
Trigger: GGTTTGCAGGACCGTTTTCAAAGCAAACACAAATTC...GTTGGACTCTAAGATCAACACCCTGTTATCATTGTGCCAAGATCCAAATTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CAA 90 bp ATGATCGATTTTGTCTGTTGGGCAGTATTTTTCCTGCTGGCGTACAACTGTTTATTAATGCTATTACGTTaGAAACTGCCAGCGCTTCTT +
Preference number: 5 (lower is better)
Translates to: MIDFVCWAVFFLLAYNCLLMLLR*KLPALL
Trigger: AAGAAGCGCTGGCAGTTTCAAACGTAATAGCATTAA...TAAACAGTTGTACGCCAGCAGGAAAAATACTGCCCAACAGACAAAATCGATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp GAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAACAGGAAACAATTTTCAACACTTaGTTCACTGATTACCCTGCT +
Preference number: 5 (lower is better)
Translates to: ELIIWQHGKPDGFIIKQETIFNT*FTDYPA
Trigger: AGCAGGGTAATCAGTGAACAAAGTGTTGAAAATTGT...TTCCTGTTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCGGTACCACAAAGAAATaGGATCTGCATTACTATGAA +
Preference number: 5 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRGTTKK*DLHYYE
Trigger: TTCATAGTAATGCAGATCCAATTTCTTTGTGGTACC...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp ACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCATCCATTGCATAACATaGAGTAAGACATGCCTCATT +
Preference number: 5 (lower is better)
Translates to: TSHFLCSCSEHLHIPDTRIHCIT*SKTCLI
Trigger: AATGAGGCATGTCTTACTCAATGTTATGCAATGGAT...GCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp AGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAACTTGGGGCAATGAATaGCCCTTTAAAGAATTTGGA +
Preference number: 5 (lower is better)
Translates to: RFGRLLGAMNCPLKNLDATWGNE*PFKEFG
Trigger: TCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGT...TGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422121.2
ENST00000471572.6
CDS-3UTR CAA 90 bp TTTGTCTGGATACACTCTCTTCTTGTTGGCATCTTGATCAGAATTGTATTAAGCCAAATGAAGACAGGTTaGGCAGATTACTTGGGGCAA +
Preference number: 5 (lower is better)
Translates to: FVWIHSLLVGILIRIVLSQMKTG*ADYLGQ
Trigger: TTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTG...GCTTAATACAATTCTGATCAAGATGCCAACAAGAAGAGAGTGTATCCAGACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422121.2
CDS-3UTR CAA 90 bp AATATGAAGACTGATTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATTAAGAAGTGCTAGTTaGAAACTGCCAGCGCTTCTT +
Preference number: 5 (lower is better)
Translates to: NMKTDFQMKTGLADYLGQLRSAS*KLPALL
Trigger: AAGAAGCGCTGGCAGTTTCAAACTAGCACTTCTTAA...TTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAATCAGTCTTCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS GCA 90 bp ACCCAGTTCCAAAATGCCTTTTCCAGGCTATTTATAACTGCTAACTaGGCAACCTTCTTTAGGGCTTTAAATTTAAATGCTGTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: TQFQNAFSRLFITAN*ATFFRALNLNAVSF
Trigger: GAAGGAAACAGCATTTAAATTTAAAGCCCTAAAGAAGGTTGCGCAGTTAGCAGTTATAAATAGCCTGGAAAAGGCATTTTGGAACTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000431387.8
ENST00000487476.5
ENST00000579081.5
CDS GCA 90 bp ACCCAGTTCCAAAATGCCTTTTCCAGGCTATTTATAACTGCTAACTaGGCAACCTTCTTTAGGGCTTTAAATTTAAATGCTGTTTCTGGT +
Preference number: 5 (lower is better)
Translates to: TQFQNAFSRLFITAN*ATFFRALNLNAVSG
Trigger: ACCAGAAACAGCATTTAAATTTAAAGCCCTAAAGAAGGTTGCGCAGTTAGCAGTTATAAATAGCCTGGAAAAGGCATTTTGGAACTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490416.2
ENST00000495910.6
CDS GCA 90 bp ATTTACTTCCAGATTTTCAGGATGGTCTATGGATGGTTGAGTTATTaGTGGCAGCAGGAAAGTGAGGTACCTAATAGATTTTGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: IYFQIFRMVYGWLSY*WQQESEVPNRFCVS
Trigger: AGAAACACAAAATCTATTAGGTACCTCACTTTCCTGCTGCCAGCAATAACTCAACCATCCATAGACCATCCTGAAAATCTGGAAGTAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577967.1
CDS CCA 90 bp ATGAGACACTCGTTTGCTAATACACCCAAAGACAACAAGAGCTCTTaGTTGCAGGGATGGATTATATTGGAATGCAAATCTGCAATTAAA +
Preference number: 5 (lower is better)
Translates to: MRHSFANTPKDNKSS*LQGWIILECKSAIK
Trigger: TTTAATTGCAGATTTGCATTCCAATATAATCCATCCCTGCAACCAAGAGCTCTTGTTGTCTTTGGGTGTATTAGCAAACGAGTGTCTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTATTTCATCTAATCTCATaGTGTCCTTTGGTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLFHLIS*CPLVAQ
Trigger: CTGGGCAACCAAAGGACACAATGAGATTAGATGAAA...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTAAGACTGCATTGAAGTaGTTGCAGCTGAGAGAAAAT +
Preference number: 5 (lower is better)
Translates to: IISGHKIRRMICSGQTAAKTALK*LQLREN
Trigger: ATTTTCTCTCAGCTGCAACAACTTCAATGCAGTCTT...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS-3UTR CAA 90 bp TTCTACAAAGTAATAAATCATTCAGCTGATTCTGAACATCTCCATCTACAGGCAACTGCTGCTTTACGTTaGGTGCTTTCAGCAAAACCA +
Preference number: 5 (lower is better)
Translates to: FYKVINHSADSEHLHLQATAALR*VLSAKP
Trigger: TGGTTTTGCTGAAAGCACCAAACGTAAAGCAGCAGT...TGCCTGTAGATGGAGATGTTCAGAATCAGCTGAATGATTTATTACTTTGTAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CAA 90 bp CATACCATTTCCAGAAATGACATCTACCTGTTACTCACAGAAACCACACACCAATCATCAACCACGTCTTaGGATATATCCTGGATTATT +
Preference number: 5 (lower is better)
Translates to: HTISRNDIYLLLTETTHQSSTTS*DISWII
Trigger: AATAATCCAGGATATATCCAAAGACGTGGTTGATGA...TTGGTGTGTGGTTTCTGTGAGTAACAGGTAGATGTCATTTCTGGAAATGGTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487476.5
CDS-3UTR CAA 90 bp GTTTCTTCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACTTATCATCAACCACGTCTTaGGATATATCCTGGATTATT +
Preference number: 5 (lower is better)
Translates to: VSSSIPGRYVSIKASRNLSSTTS*DISWII
Trigger: AATAATCCAGGATATATCCAAAGACGTGGTTGATGA...TAAGTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGAAGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTATGTAAAGCAAGCACATaGCCGTCACTTATGAAGGAA +
Preference number: 5 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLCKAST*PSLMKE
Trigger: TTCCTTCATAAGTGACGGCAATGTGCTTGCTTTACA...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp AAGAATAGCAGTAACTCTTTGTCGTTTGGCATCATCATTATGCTTGCAAAAACGTGTAAAGCAAGCACATaGCCGTCACTTATGAAGGAA +
Preference number: 5 (lower is better)
Translates to: KNSSNSLSFGIIIMLAKTCKAST*PSLMKE
Trigger: TTCCTTCATAAGTGACGGCAATGTGCTTGCTTTACA...CGTTTTTGCAAGCATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTCAAATCACCATTGATTaGACCAGTTTTGAACCTCCG +
Preference number: 5 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSQITID*TSFEPP
Trigger: CGGAGGTTCAAAACTGGTCAAATCAATGGTGATTTG...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTACAAATCACCATTGATTaGACCAGTTTTGAACCTCCG +
Preference number: 5 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLQITID*TSFEPP
Trigger: CGGAGGTTCAAAACTGGTCAAATCAATGGTGATTTG...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCATAAAGAGGGTGTTGTaGGCAGGGATACATAAACCT +
Preference number: 5 (lower is better)
Translates to: VEFNLLKSSNETALQETPIKRVL*AGIHKP
Trigger: AGGTTTATGTATCCCTGCCAACAACACCCTCTTTAT...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTATAAAGAGGGTGTTGTaGGCAGGGATACATAAACCT +
Preference number: 5 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSIKRVL*AGIHKP
Trigger: AGGTTTATGTATCCCTGCCAACAACACCCTCTTTAT...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACTTAACAATAGTAACTCTTTGTCGTTaGGCATCATCATTATGCTTG +
Preference number: 5 (lower is better)
Translates to: SSIPGRYVSIKASRNLTIVTLCR*ASSLCL
Trigger: CAAGCATAATGATGATGCCAAACGACAAAGAGTTAC...TATTGTTAAGTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAAATAGCAGTAACTCTTaGTCGTTTGGCATCATCATT +
Preference number: 5 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTNSSNS*SFGIII
Trigger: AATGATGATGCCAAACGACAAAGAGTTACTGCTATT...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CTGACCTCCCACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACAGTCATTGTTATCAGCTaGTCAAGAATAGCAGTAACT +
Preference number: 5 (lower is better)
Translates to: LTSHFLCSCSEHLHIPDTVIVIS*SRIAVT
Trigger: AGTTACTGCTATTCTTGACAAGCTGATAACAATGAC...TGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGTGGGAGGTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GAACTCTGTCAGACTGAGTCTCAAAACTTGCTTGGTCTCTTCACTAAAATGAAGGTCATTGTTATCAGCTaGTCAAGAATAGCAGTAACT +
Preference number: 5 (lower is better)
Translates to: ELCQTESQNLLGLFTKMKVIVIS*SRIAVT
Trigger: AGTTACTGCTATTCTTGACAAGCTGATAACAATGAC...CTTCATTTTAGTGAAGAGACCAAGCAAGTTTTGAGACTCAGTCTGACAGAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCCTGTTGCACTGGTTTaGATGAAACTGTCTAGTACA +
Preference number: 5 (lower is better)
Translates to: VEFNLLKSSNETALQETPPVALV*MKLSST
Trigger: TGTACTAGACAGTTTCATCAAAACCAGTGCAACAGG...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTCCTGTTGCACTGGTTTaGATGAAACTGTCTAGTACA +
Preference number: 5 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSPVALV*MKLSST
Trigger: TGTACTAGACAGTTTCATCAAAACCAGTGCAACAGG...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp AAGAATAGCAGTAACTCTTTGTCGTTTGGCATCATCATTATGCTTGCAAAAACGCCTGTTGCACTGGTTTaGATGAAACTGTCTAGTACA +
Preference number: 5 (lower is better)
Translates to: KNSSNSLSFGIIIMLAKTPVALV*MKLSST
Trigger: TGTACTAGACAGTTTCATCAAAACCAGTGCAACAGG...CGTTTTTGCAAGCATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp ACACTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGATCTTGGCACAATCCTGTTGCACTGGTTTaGATGAAACTGTCTAGTACA +
Preference number: 5 (lower is better)
Translates to: TLCTIPWIGFNKFGSWHNPVALV*MKLSST
Trigger: TGTACTAGACAGTTTCATCAAAACCAGTGCAACAGG...ATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp ACCTTGCTTGAAACCAATTTCACATTTCCAGAAGCCAAAGCTACAGCAGTATCTATCCTTCCAATAACCTaGCTTGAAACCAATTTCACA +
Preference number: 5 (lower is better)
Translates to: TLLETNFTFPEAKATAVSILPIT*LETNFT
Trigger: TGTGAAATTGGTTTCAAGCAAGGTTATTGGAAGGAT...AGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAAGCAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAACAAGAGCTCTTGGTaGCAGGGATGGATTATATTG +
Preference number: 5 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSNKSSW*QGWIIL
Trigger: CAATATAATCCATCCCTGCAACCAAGAGCTCTTGTT...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTCAACTCTCAAGTGCCTaGCTAAGAATACGGATTATC +
Preference number: 5 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSQLSSA*LRIRII
Trigger: GATAATCCGTATTCTTAGCAAGGCACTTGAGAGTTG...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCAGCTTCTATCAGAACTaGACTGTTGTAAGTGTCAGG +
Preference number: 5 (lower is better)
Translates to: VEFNLLKSSNETALQETPSFYQN*TVVSVR
Trigger: CCTGACACTTACAACAGTCAAGTTCTGATAGAAGCT...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTAAGCTTCTATCAGAACTaGACTGTTGTAAGTGTCAGG +
Preference number: 5 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLSFYQN*TVVSVR
Trigger: CCTGACACTTACAACAGTCAAGTTCTGATAGAAGCT...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TTCGAAGAGTTGATCATCTGGCAACATGGCAAACCGGATGGGTTCATTATAAAAAGAAGTGGCTGTAATTaGGTTAGTGCTATTACTGTA +
Preference number: 5 (lower is better)
Translates to: FEELIIWQHGKPDGFIIKRSGCN*VSAITV
Trigger: TACAGTAATAGCACTAACCAAATTACAGCCACTTCT...TTTTATAATGAACCCATCCGGTTTGCCATGTTGCCAGATGATCAACTCTTCGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTAGAAGTGGCTGTAATTaGGTTAGTGCTATTACTGTA +
Preference number: 5 (lower is better)
Translates to: FGRLLGAMNCPLKNLDAARSGCN*VSAITV
Trigger: TACAGTAATAGCACTAACCAAATTACAGCCACTTCT...AGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp AATATGAAGACTGATTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATCTGGACTCTTGTCATaGAATATACGGAGACTATCT +
Preference number: 5 (lower is better)
Translates to: NMKTDFQMKTGLADYLGQSGLLS*NIRRLS
Trigger: AGATAGTCTCCGTATATTCAATGACAAGAGTCCAGA...TTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAATCAGTCTTCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCACTTCCTCTGGACTCTaGTCATTGAATATACGGAGA +
Preference number: 5 (lower is better)
Translates to: VEFNLLKSSNETALQETPTSSGL*SLNIRR
Trigger: TCTCCGTATATTCAATGACAAGAGTCCAGAGGAAGT...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TTTCCAAATGAAGACAGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAATGATAACAGGGTGTaGATCTTAGAGTCCAACAAA +
Preference number: 5 (lower is better)
Translates to: FPNEDRFGRLLGAMNCPLNDNRV*ILESNK
Trigger: TTTGTTGGACTCTAAGATCAACACCCTGTTATCATT...TAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCTGTCTTCATTTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp AGGAGCAAAATTTGCTATAAACTGATCACAAGGGAATTCCTAATGTTGGTGTCTGTAAGATGTTTGGTATaGTGGTGGGGATTCTTCATG +
Preference number: 5 (lower is better)
Translates to: RSKICYKLITREFLMLVSVRCLV*WWGFFM
Trigger: CATGAAGAATCCCCACCACAATACCAAACATCTTAC...AGACACCAACATTAGGAATTCCCTTGTGATCAGTTTATAGCAAATTTTGCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468273.1
CDS-3UTR CAA 90 bp CTCTGCACAATTCCATGGATTGGATTTAACAAATTTGGATCTTGGCACAATGATGTAAGATGTTTGGTATaGTGGTGGGGATTCTTCATG +
Preference number: 5 (lower is better)
Translates to: LCTIPWIGFNKFGSWHNDVRCLV*WWGFFM
Trigger: CATGAAGAATCCCCACCACAATACCAAACATCTTAC...ATCATTGTGCCAAGATCCAAATTTGTTAAATCCAATCCATGGAATTGTGCAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579081.5
ENST00000581790.5
CDS-3UTR CAA 90 bp ATAGATGGGTACATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCAAGATTGCAGGTAAGATGTTaGGTATTGTGGTGGGGATTC +
Preference number: 5 (lower is better)
Translates to: IDGYICFSLMVIVISLSRLQVRC*VLWWGF
Trigger: GAATCCCCACCACAATACCAAACATCTTACCTGCAA...TCTTGACAAGCTGATAACAATGACCATCAATGAAAAACAGATGTACCCATCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTGAATTTGTGTTTGCTTaGAAAACGGTCCTGCAAACC +
Preference number: 5 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSEFVFA*KTVLQT
Trigger: GGTTTGCAGGACCGTTTTCAAAGCAAACACAAATTC...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CTGATCACAAGGGAATTCCTAATGTTGGTGTCTTATATTGTTGCTCAAAGTCATGAATTTGTGTTTGCTTaGAAAACGGTCCTGCAAACC +
Preference number: 5 (lower is better)
Translates to: LITREFLMLVSYIVAQSHEFVFA*KTVLQT
Trigger: GGTTTGCAGGACCGTTTTCAAAGCAAACACAAATTC...ATGACTTTGAGCAACAATATAAGACACCAACATTAGGAATTCCCTTGTGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468273.1
CDS-3UTR CAA 90 bp AGGAGCAAAATTTGCTATAAACTGATCACAAGGGAATTCCTAATGTTGGTGTCTTTAGAAAGGTTAAGGTaGGCAGTGATACTAAGCTGG +
Preference number: 5 (lower is better)
Translates to: RSKICYKLITREFLMLVSLERLR*AVILSW
Trigger: CCAGCTTAGTATCACTGCCAACCTTAACCTTTCTAA...AGACACCAACATTAGGAATTCCCTTGTGATCAGTTTATAGCAAATTTTGCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468273.1
CDS-3UTR CAA 90 bp TGGCACAATGATAACAGGGTGTTGATCTTAGAGTCCAACAAATTATGCACAACATTAATGCTATTACGTTaGAAACTGCCAGCGCTTCTT +
Preference number: 5 (lower is better)
Translates to: WHNDNRVLILESNKLCTTLMLLR*KLPALL
Trigger: AAGAAGCGCTGGCAGTTTCAAACGTAATAGCATTAA...TGTTGTGCATAATTTGTTGGACTCTAAGATCAACACCCTGTTATCATTGTGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAAGTCATGAACAGGTGTaGAGTGAATGGAAGACAGAG +
Preference number: 5 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRSHEQV*SEWKTE
Trigger: CTCTGTCTTCCATTCACTCAACACCTGTTCATGACT...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTTGGATGCAGCTCAGGGATGGATTATATaGGAATGCAAATCTGCAATT +
Preference number: 5 (lower is better)
Translates to: FGRLLGAMNCPLKNLDAAQGWII*ECKSAI
Trigger: AATTGCAGATTTGCATTCCAATATAATCCATCCCTG...AGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS-3UTR CAA 90 bp ATTATTTCTGGACACAAGATAAGGAGAATGATTTGTAGTGGCCAAACTGCTGCTATTTTAGAAACCCACTaGCTCTCTGAAACCAGTTAC +
Preference number: 5 (lower is better)
Translates to: IISGHKIRRMICSGQTAAILETH*LSETSY
Trigger: GTAACTGGTTTCAGAGAGCAAGTGGGTTTCTAAAAT...AGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGTCCAGAAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS CCA 90 bp TTTGCTAATACACCCAAAGACAACAAGAGCTCTTGGTTGCAGGGATaGATTATATTGGAATGCAAATCTGCAATTAAAAGATCCACAGAA +
Preference number: 5 (lower is better)
Translates to: FANTPKDNKSSWLQG*IILECKSAIKRSTE
Trigger: TTCTGTGGATCTTTTAATTGCAGATTTGCATTCCAATATAATCCATCCCTGCAACCAAGAGCTCTTGTTGTCTTTGGGTGTATTAGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS CCA 90 bp TTTAGATTCCACTCACTAGACACTGTAAAGGGCTCAGAGGGTTACTaGCAATCCAAATGCAAAAACTTCTGTATGATATACTTATTTCTG +
Preference number: 5 (lower is better)
Translates to: FRFHSLDTVKGSEGY*QSKCKNFCMIYLFL
Trigger: CAGAAATAAGTATATCATACAGAAGTTTTTGCATTTGGATTGCCAGTAACCCTCTGAGCCCTTTACAGTGTCTAGTGAGTGGAATCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577967.1
CDS-3UTR CAA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAATTAGACATTCCTTGTaGTGCTCAGTACTGACTTTG +
Preference number: 5 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRIRHSL*CSVLTL
Trigger: CAAAGTCAGTACTGAGCACAACAAGGAATGTCTAAT...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCATTAGACATTCCTTGTaGTGCTCAGTACTGACTTTG +
Preference number: 5 (lower is better)
Translates to: VEFNLLKSSNETALQETPIRHSL*CSVLTL
Trigger: CAAAGTCAGTACTGAGCACAACAAGGAATGTCTAAT...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAAGACTGCATTGAAGTaGTTGCAGCTGAGAGAAAAT +
Preference number: 5 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSKTALK*LQLREN
Trigger: ATTTTCTCTCAGCTGCAACAACTTCAATGCAGTCTT...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp ATAAATCATTCAGCTGATTCTGAACATCTCCATCTACAGGCAAACCATGAAGGATCATCAACCACGTCTTaGGATATATCCTGGATTATT +
Preference number: 5 (lower is better)
Translates to: INHSADSEHLHLQANHEGSSTTS*DISWII
Trigger: AATAATCCAGGATATATCCAAAGACGTGGTTGATGA...TCCTTCATGGTTTGCCTGTAGATGGAGATGTTCAGAATCAGCTGAATGATTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS-3UTR CAA 90 bp TATCAGCTTGTCAAGAATAGCAGTAACTCTTTGTCGTTTGGCATCATCATTATGACAATAAAGAGGGTGTaGTTGGCAGGGATACATAAA +
Preference number: 5 (lower is better)
Translates to: YQLVKNSSNSLSFGIIIMTIKRV*LAGIHK
Trigger: TTTATGTATCCCTGCCAACAACACCCTCTTTATTGT...CATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTTGACAAGCTGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAAAAAACGAACTAGATTaGACAGCCATGGAGTCATGT +
Preference number: 5 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRKNELD*TAMESC
Trigger: ACATGACTCCATGGCTGTCAAATCTAGTTCGTTTTT...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TCATTGAATATACGGAGACTATCTAAAGTATGCAGGTTTTGTTCAAGAAGTGCGAAAAACGAACTAGATTaGACAGCCATGGAGTCATGT +
Preference number: 5 (lower is better)
Translates to: SLNIRRLSKVCRFCSRSAKNELD*TAMESC
Trigger: ACATGACTCCATGGCTGTCAAATCTAGTTCGTTTTT...CGCACTTCTTGAACAAAACCTGCATACTTTAGATAGTCTCCGTATATTCAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAGTAACTCTTTGTCGTTaGGCATCATCATTATGCTTG +
Preference number: 5 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRVTLCR*ASSLCL
Trigger: CAAGCATAATGATGATGCCAAACGACAAAGAGTTAC...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGATCCCCATATTTTTGCTaGAATAGATGGGTACATCTG +
Preference number: 5 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRSPYFC*NRWVHL
Trigger: CAGATGTACCCATCTATTCAAGCAAAAATATGGGGA...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp TCATCAATTCCAGGCAGGTACGTGTCAATCAAGGCATCAAGAAACTTAACAATAGGAGATAAGCATGTCTaGTCAATTATTTTGCACATC +
Preference number: 5 (lower is better)
Translates to: SSIPGRYVSIKASRNLTIGDKHV*SIILHI
Trigger: GATGTGCAAAATAATTGACAAGACATGCTTATCTCC...TATTGTTAAGTTTCTTGATGCCTTGATTGACACGTACCTGCCTGGAATTGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTACTGAGTCTCAAAACTaGCTTGGTCTCTTCACTAAA +
Preference number: 5 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSTESQN*LGLFTK
Trigger: TTTAGTGAAGAGACCAAGCAAGTTTTGAGACTCAGT...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCCAGGGATGGATTATATaGGAATGCAAATCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: VEFNLLKSSNETALQETPQGWII*ECKSLS
Trigger: GCTCAAAGATTTGCATTCCAATATAATCCATCCCTG...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTCAGGGATGGATTATATaGGAATGCAAATCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSQGWII*ECKSLS
Trigger: GCTCAAAGATTTGCATTCCAATATAATCCATCCCTG...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTTCTGGACTCTTGTCATaGAATATACGGAGACTATCT +
Preference number: 5 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSSGLLS*NIRRLS
Trigger: AGATAGTCTCCGTATATTCAATGACAAGAGTCCAGA...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS GCA 90 bp AAATACTTTGTAAGTGGTCCAGAGGTGTGTAAAGTACCAAACTCTTaGCGCTTTGCTTTTATTATCAGAATTTTGGTGGATTTCTCAATG +
Preference number: 5 (lower is better)
Translates to: KYFVSGPEVCKVPNS*RFAFIIRILVDFSM
Trigger: CATTGAGAAATCCACCAAAATTCTGATAATAAAAGCAAAGCGGCAAGAGTTTGGTACTTTACACACCTCTGGACCACTTACAAAGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493220.5
CDS-3UTR CAA 90 bp CATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCAAGAATAGCAGTAACATTAGACATTCCTTGTaGTGCTCAGTACTGACTTTG +
Preference number: 5 (lower is better)
Translates to: HLFFIDGHCYQLVKNSSNIRHSL*CSVLTL
Trigger: CAAAGTCAGTACTGAGCACAACAAGGAATGTCTAAT...GTTACTGCTATTCTTGACAAGCTGATAACAATGACCATCAATGAAAAACAGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGATTGATTAGACATTCCTaGTTGTGCTCAGTACTGACT +
Preference number: 5 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRLIRHS*LCSVLT
Trigger: AGTCAGTACTGAGCACAACAAGGAATGTCTAATCAA...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp ATAGATGGGTACATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCAAGAAAAAACGAACTAGATTaGACAGCCATGGAGTCATGT +
Preference number: 5 (lower is better)
Translates to: IDGYICFSLMVIVISLSRKNELD*TAMESC
Trigger: ACATGACTCCATGGCTGTCAAATCTAGTTCGTTTTT...TCTTGACAAGCTGATAACAATGACCATCAATGAAAAACAGATGTACCCATCTAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp GTGGAATTTAATTTACTGAAATCCTCTAATGAAACAGCACTACAGGAAACTCCCGTCATTGTTATCAGCTaGTCAAGAATAGCAGTAACT +
Preference number: 5 (lower is better)
Translates to: VEFNLLKSSNETALQETPVIVIS*SRIAVT
Trigger: AGTTACTGCTATTCTTGACAAGCTGATAACAATGAC...GGGAGTTTCCTGTAGTGCTGTTTCATTAGAGGATTTCAGTAAATTAAATTCCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TATCAGCTTGTCAAGAATAGCAGTAACTCTTTGTCGTTTGGCATCATCATTATGGTCATTGTTATCAGCTaGTCAAGAATAGCAGTAACT +
Preference number: 5 (lower is better)
Translates to: YQLVKNSSNSLSFGIIIMVIVIS*SRIAVT
Trigger: AGTTACTGCTATTCTTGACAAGCTGATAACAATGAC...CATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTTGACAAGCTGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp GTTTCCTCTTTAACAAGTCAGGGGAAACATCTACAAACCGAAACGAATTACTTAATCCTTCCAATAACCTaGCTTGAAACCAATTTCACA +
Preference number: 5 (lower is better)
Translates to: VSSLTSQGKHLQTETNYLILPIT*LETNFT
Trigger: TGTGAAATTGGTTTCAAGCAAGGTTATTGGAAGGAT...TAAGTAATTCGTTTCGGTTTGTAGATGTTTCCCCTGACTTGTTAAAGAGGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAGTCTTGTCAATTATTTaGCACATCCTTCCAATAACC +
Preference number: 5 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRVLSII*HILPIT
Trigger: GGTTATTGGAAGGATGTGCAAAATAATTGACAAGAC...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ATCTTCGGATCAGTAAGTACTTCTTCATCCAAGAGAACATTTGATTCAGACACTGTCTTGTCAATTATTTaGCACATCCTTCCAATAACC +
Preference number: 5 (lower is better)
Translates to: IFGSVSTSSSKRTFDSDTVLSII*HILPIT
Trigger: GGTTATTGGAAGGATGTGCAAAATAATTGACAAGAC...AGTGTCTGAATCAAATGTTCTCTTGGATGAAGAAGTACTTACTGATCCGAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS-3UTR CAA 90 bp TATCAGCTTGTCAAGAATAGCAGTAACTCTTTGTCGTTTGGCATCATCATTATGGGAGATAAGCATGTCTaGTCAATTATTTTGCACATC +
Preference number: 5 (lower is better)
Translates to: YQLVKNSSNSLSFGIIIMGDKHV*SIILHI
Trigger: GATGTGCAAAATAATTGACAAGACATGCTTATCTCC...CATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTTGACAAGCTGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp TTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAGAAGAAGAAGTGGCTGTAATTaGGTTAGTGCTATTACTGTA +
Preference number: 5 (lower is better)
Translates to: FAVVLNTYIYQIHAKSRRRSGCN*VSAITV
Trigger: TACAGTAATAGCACTAACCAAATTACAGCCACTTCT...TCTTCTACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp ACTTTCTTTGCAGTTGTTCTGAACACTTACATATACCAGATACACGCCAAAAGTAATGATAACAGGGTGTaGATCTTAGAGTCCAACAAA +
Preference number: 5 (lower is better)
Translates to: TFFAVVLNTYIYQIHAKSNDNRV*ILESNK
Trigger: TTTGTTGGACTCTAAGATCAACACCCTGTTATCATT...ACTTTTGGCGTGTATCTGGTATATGTAAGTGTTCAGAACAACTGCAAAGAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000456735.6
CDS-3UTR CAA 90 bp CTGATCACAAGGGAATTCCTAATGTTGGTGTCTTATATTGTTGCTCAAAGTCATAGGGAATTCCTAATGTaGGTGTCTTATATTGTTGCT +
Preference number: 5 (lower is better)
Translates to: LITREFLMLVSYIVAQSHREFLM*VSYIVA
Trigger: AGCAACAATATAAGACACCAACATTAGGAATTCCCT...ATGACTTTGAGCAACAATATAAGACACCAACATTAGGAATTCCCTTGTGATCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468273.1
CDS-3UTR CAA 90 bp CTGATCACAAGGGAATTCCTAATGTTGGTGTCTTATATTGTTGCTCAAAGTCATACAAACTTGTCAACCTaGGAATATCATGTGGACATT +
Preference number: 5 (lower is better)
Translates to: LITREFLMLVSYIVAQSHTNLST*EYHVDI
Trigger: AATGTCCACATGATATTCCAAGGTTGACAAGTTTGT...ATGACTTTGAGCAACAATATAAGACACCAACATTAGGAATTCCCTTGTGATCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468273.1
CDS-3UTR CAA 90 bp CAGCCTCAAACAGCTTTTAAAATGGTGATTTCAATGATGCTGTTAACGTCTCTAACCATAACCCATAACTaGGGCTTTAAGTTAGTTAGA +
Preference number: 5 (lower is better)
Translates to: QPQTAFKMVISMMLLTSLTITHN*GFKLVR
Trigger: TCTAACTAACTTAAAGCCCAAGTTATGGGTTATGGT...TAGAGACGTTAACAGCATCATTGAAATCACCATTTTAAAAGCTGTTTGAGGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495910.6
CDS TCA 90 bp ACACTAAAAAGAAAATGTTTGGACATAAAGTGTTTAAGCTTTCACTaGGGACTCAAAGAAAGCTCTAATACATCCCTGGAGCAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: TLKRKCLDIKCLSFH*GLKESSNTSLEQFL
Trigger: AAGAAACTGCTCCAGGGATGTATTAGAGCTTTCTTTGAGTCCTCAGTGAAAGCTTAAACACTTTATGTCCAAACATTTTCTTTTTAGTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577967.1
CDS TCA 90 bp CAAGGAACTTTGATCAATTTGGAGAGAGCCCACATACAGAGAAAATaGTCATATACATCTTATGTAGCACTACATAAACTAATGCCAATC +
Preference number: 5 (lower is better)
Translates to: QGTLINLERAHIQRK*SYTSYVALHKLMPI
Trigger: GATTGGCATTAGTTTATGTAGTGCTACATAAGATGTATATGATCATTTTCTCTGTATGTGGGCTCTCTCCAAATTGATCAAAGTTCCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577967.1
CDS-3UTR CAA 90 bp TTGAATAGATGGGTACATCTGTTTTTCATTGATGGTCATTGTTATCAGCTTGTCATCCTTCCAATAACCTaGCTTGAAACCAATTTCACA +
Preference number: 5 (lower is better)
Translates to: LNRWVHLFFIDGHCYQLVILPIT*LETNFT
Trigger: TGTGAAATTGGTTTCAAGCAAGGTTATTGGAAGGAT...GACAAGCTGATAACAATGACCATCAATGAAAAACAGATGTACCCATCTATTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479536.2
ENST00000579081.5
CDS-3UTR CAA 90 bp AACACCCACTATCATATGCACCAAACCAACAAACAAAAACAAGAAAAACATCGAGGAGATAAGCATGTCTaGTCAATTATTTTGCACATC +
Preference number: 5 (lower is better)
Translates to: NTHYHMHQTNKQKQEKHRGDKHV*SIILHI
Trigger: GATGTGCAAAATAATTGACAAGACATGCTTATCTCC...TCGATGTTTTTCTTGTTTTTGTTTGTTGGTTTGGTGCATATGATAGTGGGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000358273.9
CDS-3UTR CAA 90 bp TTTGACAGCCATGGAGTCATGTATTCCAAACAAAGGTGTTTCAATTCAATACTAAATGATAACAGGGTGTaGATCTTAGAGTCCAACAAA +
Preference number: 5 (lower is better)
Translates to: FDSHGVMYSKQRCFNSILNDNRV*ILESNK
Trigger: TTTGTTGGACTCTAAGATCAACACCCTGTTATCATT...TAGTATTGAATTGAAACACCTTTGTTTGGAATACATGACTCCATGGCTGTCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579081.5
CDS CCA 72 bp ACAGTCCGAGACGCCGCCATGACACCCCACCGGAAGTaGGATCCTTTCCACGGCCCGGGGAGAGGGAGCGCG +
Preference number: 6 (lower is better)
Translates to: TVRDAAMTPHRK*DPFHGPGRGSA
Trigger: CGCGCTCCCTCTCCCCGGGCCGTGGAAAGGATCCCACTTCCGGTGGGGTGTCATGGCGGCGTCTCGGACTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000487476.5
CDS CCA 72 bp ATTGGAAGCTGCTCGTCGAAGCGGCTGACCACGGCCTaGACCCATTCCACCGGCCTGTGCGCGGCCATGTCC +
Preference number: 6 (lower is better)
Translates to: IGSCSSKRLTTA*THSTGLCAAMS
Trigger: GGACATGGCCGCGCACAGGCCGGTGGAATGGGTCCAGGCCGTGGTCAGCCGCTTCGACGAGCAGCTTCCAAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000431387.8
ENST00000487476.5
ENST00000579081.5
CDS TCA 72 bp GTCTCCCCACAGCCATCACAGTCCGAGACGCCGCCATaGCACCCCACCGGAAGTGGGATCCTTTCCACGGCC +
Preference number: 6 (lower is better)
Translates to: VSPQPSQSETPP*HPTGSGILSTA
Trigger: GGCCGTGGAAAGGATCCCACTTCCGGTGGGGTGTCATGGCGGCGTCTCGGACTGTGATGGCTGTGGGGAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356175.7
ENST00000487476.5
CDS TCA 72 bp GTCCTGTTTTTATTGGAAGCTGCTCGTCGAAGCGGCTaGCCACGGCCTGGACCCATTCCACCGGCCTGTGCG +
Preference number: 6 (lower is better)
Translates to: VLFLLEAARRSG*PRPGPIPPACA
Trigger: CGCACAGGCCGGTGGAATGGGTCCAGGCCGTGGTCAGCCGCTTCGACGAGCAGCTTCCAATAAAAACAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000431387.8
ENST00000487476.5
ENST00000579081.5
CDS CAA 72 bp AGCTGCAGCACAGCCACAGCTACCCAAAAGAGGGCTTaGTGCAGAGGCGAGTCCTTTGAGCTAGTTCTGTCC +
Preference number: 6 (lower is better)
Translates to: SCSTATATQKRA*CRGESFELVLS
Trigger: GGACAGAACTAGCTCAAAGGACTCGCCTCTGCACAAAGCCCTCTTTTGGGTAGCTGTGGCTGTGCTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581790.5
CDS GCA 72 bp AGTGCTAGTTTGAAACTGCCAGCGCTTCTTTGCTTCTaGACTTGGCTTGCGGATCCGTGGCGAGTTCGTCCA +
Preference number: 6 (lower is better)
Translates to: SASLKLPALLCF*TWLADPWRVRP
Trigger: TGGACGAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACTAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS GCA 72 bp TGCAGCACAGCCACAGCTACCCAAAAGAGGGCTTTGTaGAGAGGCGAGTCCTTTGAGCTAGTTCTGTCCACT +
Preference number: 6 (lower is better)
Translates to: CSTATATQKRAL*RGESFELVLST
Trigger: AGTGGACAGAACTAGCTCAAAGGACTCGCCTCTGCACAAAGCCCTCTTTTGGGTAGCTGTGGCTGTGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581790.5
CDS CCA 72 bp AGTTTGAAACTGCCAGCGCTTCTTTGCTTCTGCACTTaGCTTGCGGATCCGTGGCGAGTTCGTCCACTGTTA +
Preference number: 6 (lower is better)
Translates to: SLKLPALLCFCT*LADPWRVRPLL
Trigger: TAACAGTGGACGAACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS CAA 72 bp AGCTGCAGCACAGCCACAGCTACCCAAAAGAGGGCTTaGTGCAGAGGCGAGTCCTGGCAAAGAAGATATGTT +
Preference number: 6 (lower is better)
Translates to: SCSTATATQKRA*CRGESWQRRYV
Trigger: AACATATCTTCTTTGCCAGGACTCGCCTCTGCACAAAGCCCTCTTTTGGGTAGCTGTGGCTGTGCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582892.1
CDS GCA 72 bp TTAAGAAGTGCTAGTTTGAAACTGCCAGCGCTTCTTTaGTTCTGCACTTGGCTTGCGGATCCGTGGCGAGTT +
Preference number: 6 (lower is better)
Translates to: LRSASLKLPALL*FCTWLADPWRV
Trigger: AACTCGCCACGGATCCGCAAGCCAAGTGCAGAAGCAAAGAAGCGCTGGCAGTTTCAAACTAGCACTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS TCA 72 bp AGGCAGAGAAGCTGGGGAATGCTGGGAAGTTGCAAGTaGGGTCATGGAATTAGAAAGGTTAAGGTTGGCAGT +
Preference number: 6 (lower is better)
Translates to: RQRSWGMLGSCK*GHGIRKVKVGS
Trigger: ACTGCCAACCTTAACCTTTCTAATTCCATGACCTCACTTGCAACTTCCCAGCATTCCCCAGCTTCTCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456735.6
CDS TCA 72 bp GATTCCTTGATGAGGGAACAGCTGCATGAAAACTGCTaGTTTAGAGCAAGGCAGAGAAGCTGGGGAATGCTG +
Preference number: 6 (lower is better)
Translates to: DSLMREQLHENC*FRARQRSWGML
Trigger: CAGCATTCCCCAGCTTCTCTGCCTTGCTCTAAATCAGCAGTTTTCATGCAGCTGTTCCCTCATCAAGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456735.6
CDS CAA 90 bp AGGTTTGGCAGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTaGGATGCAGCTTTGTCAGAGGCTGTTCTGATGGGCAGTGAGCAG +
Preference number: 6 (lower is better)
Translates to: RFGRLLGAMNCPLKN*DAALSEAVLMGSEQ
Trigger: CTGCTCACTGCCCATCAGAACAGCCTCTGACAAAGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCTGCCAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422121.2
ENST00000471572.6
ENST00000498569.5
CDS CCA 72 bp CCTAGAAGCAATGGCGATTTTCTGGCAAGCGGTCTATaGCCCGCTGAATCAGACACTTGGAAAAGAACAAAA +
Preference number: 6 (lower is better)
Translates to: PRSNGDFLASGL*PAESDTWKRTK
Trigger: TTTTGTTCTTTTCCAAGTGTCTGATTCAGCGGGCCATAGACCGCTTGCCAGAAAATCGCCATTGCTTCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581113.6
CDS TCA 72 bp CATTTACTGACCTGGGGAATGCTGGGAAGTTGCAAGTaGGGTCATGGAATTAGAAAGGTTAAGGTTGGCAGT +
Preference number: 6 (lower is better)
Translates to: HLLTWGMLGSCK*GHGIRKVKVGS
Trigger: ACTGCCAACCTTAACCTTTCTAATTCCATGACCTCACTTGCAACTTCCCAGCATTCCCCAGGTCAGTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468273.1
ENST00000577967.1
CDS CCA 72 bp GGGGAAATCCTTACTAGAACAGTAAGAAGCAGCGCCTaGATCTTCGGATCAGTAAGTACTTCTTCATCCAAG +
Preference number: 6 (lower is better)
Translates to: GEILTRTVRSSA*IFGSVSTSSSK
Trigger: CTTGGATGAAGAAGTACTTACTGATCCGAAGATCCAGGCGCTGCTTCTTACTGTTCTAGTAAGGATTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577967.1
CDS GCA 72 bp AACAAAGTCAGAACTGACTCTGGGCCCTGTATTATGTaGCACTGTGCTCTCCGTGAACTGTACATTTACAAT +
Preference number: 6 (lower is better)
Translates to: NKVRTDSGPCIM*HCALRELYIYN
Trigger: ATTGTAAATGTACAGTTCACGGAGAGCACAGTGGCACATAATACAGGGCCCAGAGTCAGTTCTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493220.5
CDS CAA 72 bp AGATTACTTGGGGCAATGAATTGCCCTTTAAAGAATTaGGATGCAGCTTTGTCAGAGGCTGTTCTGATGGGC +
Preference number: 6 (lower is better)
Translates to: RLLGAMNCPLKN*DAALSEAVLMG
Trigger: GCCCATCAGAACAGCCTCTGACAAAGCTGCATCCAAATTCTTTAAAGGGCAATTCATTGCCCCAAGTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422121.2
ENST00000471572.6
ENST00000498569.5
CDS CAA 72 bp AGTCCAGAGTTCTGTAGGTTTGCCATTTCTCCCACCTaGTTTATCTCAGTCCCACTGGAGCTATTAGCTATT +
Preference number: 6 (lower is better)
Translates to: SPEFCRFAISPT*FISVPLELLAI
Trigger: AATAGCTAATAGCTCCAGTGGGACTGAGATAAACAAGGTGGGAGAAATGGCAAACCTACAGAACTCTGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577967.1
CDS TCA 72 bp ACAGGCAGAACATACTTGGTATCTTATGGTGTACGGTaGAGACGAAGACCTAATTTAAGTCATTTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: TGRTYLVSYGVR*RRRPNLSHFPA
Trigger: GGCTGGGAAATGACTTAAATTAGGTCTTCGTCTTCACCGTACACCATAAGATACCAAGTATGTTCTGCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493220.5
CDS CCA 72 bp GACTTTGGTATGTGTGTTCTGCTGTCCTGTTTTTATTaGAAGCTTACGAGAGCTCCTGAAAGCAGCACTAAA +
Preference number: 6 (lower is better)
Translates to: DFGMCVLLSCFY*KLTRAPESSTK
Trigger: TTTAGTGCTGCTTTCAGGAGCTCTCGTAAGCTTCCAATAAAAACAGGACAGCAGAACACACATACCAAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489712.6
CDS CCA 72 bp CATTTATTTACTTTGCAGGTAAGATGTTTGGTATTGTaGTGGGGATTCTTCATGGTACACCACACTCTGCAC +
Preference number: 6 (lower is better)
Translates to: HLFTLQVRCLVL*WGFFMVHHTLH
Trigger: GTGCAGAGTGTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTACCTGCAAAGTAAATAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577967.1
CDS CCA 72 bp CACTCACTAGACACTGTAAAGGGCTCAGAGGGTTACTaGCAATCCAAATGCAAAAACTTCTGTATGATATAC +
Preference number: 6 (lower is better)
Translates to: HSLDTVKGSEGY*QSKCKNFCMIY
Trigger: GTATATCATACAGAAGTTTTTGCATTTGGATTGCCAGTAACCCTCTGAGCCCTTTACAGTGTCTAGTGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577967.1
CDS CAA 90 bp TTGGAAATATTGATTAGACATTCCTTGTTGTGCTCAGTACTGACTTaGGTATGTGTGTTCTGCTGTCCTGTTTTTATTGGAAGCTGCTCG +
Preference number: 6 (lower is better)
Translates to: LEILIRHSLLCSVLT*VCVFCCPVFIGSCS
Trigger: CGAGCAGCTTCCAATAAAAACAGGACAGCAGAACACACATACCAAAGTCAGTACTGAGCACAACAAGGAATGTCTAATCAATATTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000431387.8
ENST00000487476.5
ENST00000579081.5
CDS CCA 72 bp ATTTTCAGGATGGTCTATGGATGGTTGAGTTATTGCTaGCAGCAGGAAAGTGAGGTACCTAATAGATTTTGT +
Preference number: 6 (lower is better)
Translates to: IFRMVYGWLSYC*QQESEVPNRFC
Trigger: ACAAAATCTATTAGGTACCTCACTTTCCTGCTGCCAGCAATAACTCAACCATCCATAGACCATCCTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577967.1
CDS CCA 72 bp TTTATTTACTTCCAGATTTTCAGGATGGTCTATGGATaGTTGAGTTATTGCTGGCAGCAGGAAAGTGAGGTA +
Preference number: 6 (lower is better)
Translates to: FIYFQIFRMVYG*LSYCWQQESEV
Trigger: TACCTCACTTTCCTGCTGCCAGCAATAACTCAACCATCCATAGACCATCCTGAAAATCTGGAAGTAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577967.1
CDS CAA 72 bp TTTGCTAATACACCCAAAGACAACAAGAGCTCTTGGTaGCAGGGATGGATTATATTGGAATGCAAATCTGCA +
Preference number: 6 (lower is better)
Translates to: FANTPKDNKSSW*QGWIILECKSA
Trigger: TGCAGATTTGCATTCCAATATAATCCATCCCTGCAACCAAGAGCTCTTGTTGTCTTTGGGTGTATTAGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS CAA 90 bp AGACACTCGTTTGCTAATACACCCAAAGACAACAAGAGCTCTTGGTaGCAGGGATGGATTATATTGGAATGCAAATCTGCAATTAAAAGA +
Preference number: 6 (lower is better)
Translates to: RHSFANTPKDNKSSW*QGWIILECKSAIKR
Trigger: TCTTTTAATTGCAGATTTGCATTCCAATATAATCCATCCCTGCAACCAAGAGCTCTTGTTGTCTTTGGGTGTATTAGCAAACGAGTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS CCA 72 bp ACAACAAGAGCTCTTGGTTGCAGGGATGGATTATATTaGAATGCAAATCTGCAATTAAAAGATCCACAGAAC +
Preference number: 6 (lower is better)
Translates to: TTRALGCRDGLY*NANLQLKDPQN
Trigger: GTTCTGTGGATCTTTTAATTGCAGATTTGCATTCCAATATAATCCATCCCTGCAACCAAGAGCTCTTGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471572.6
CDS CAA 72 bp TTGATTAGACATTCCTTGTTGTGCTCAGTACTGACTTaGGTATGTGTGTTCTGCTGTCCTGTTTTTATTGGA +
Preference number: 6 (lower is better)
Translates to: LIRHSLLCSVLT*VCVFCCPVFIG
Trigger: TCCAATAAAAACAGGACAGCAGAACACACATACCAAAGTCAGTACTGAGCACAACAAGGAATGTCTAATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000431387.8
ENST00000487476.5
ENST00000489712.6
ENST00000579081.5
CDS CAA 72 bp GTCCAGAGGTGTGTAAAGTACCAAACTCTTGCCGCTTaGCTTTTATTATCAGAATTTTGGTGGATTTCTCAA +
Preference number: 6 (lower is better)
Translates to: VQRCVKYQTLAA*LLLSEFWWISQ
Trigger: TTGAGAAATCCACCAAAATTCTGATAATAAAAGCAAAGCGGCAAGAGTTTGGTACTTTACACACCTCTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493220.5
CDS CAA 90 bp TTGGAAATATTGATTAGACATTCCTTGTTGTGCTCAGTACTGACTTaGGTATGTGTGTTCTGCTGTCCTGTTTTTATTGGAAGCTTACGA +
Preference number: 6 (lower is better)
Translates to: LEILIRHSLLCSVLT*VCVFCCPVFIGSLR
Trigger: TCGTAAGCTTCCAATAAAAACAGGACAGCAGAACACACATACCAAAGTCAGTACTGAGCACAACAAGGAATGTCTAATCAATATTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489712.6
CDS CAA 90 bp TTTGCCCTCCTTACCTTATTCATGTTGTTTTCATCAACCACGTCTTaGGATATATCCTGGATTATTTCTGGACACAAGATAAGGAGAATG +
Preference number: 6 (lower is better)
Translates to: FALLTLFMLFSSTTS*DISWIISGHKIRRM
Trigger: CATTCTCCTTATCTTGTGTCCAGAAATAATCCAGGATATATCCAAAGACGTGGTTGATGAAAACAACATGAATAAGGTAAGGAGGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS TCA 72 bp AGAAAATGTTTGGACATAAAGTGTTTAAGCTTTCACTaGGGACTCAAAGAAAGCTCTAATACATCCCTGGAG +
Preference number: 6 (lower is better)
Translates to: RKCLDIKCLSFH*GLKESSNTSLE
Trigger: CTCCAGGGATGTATTAGAGCTTTCTTTGAGTCCTCAGTGAAAGCTTAAACACTTTATGTCCAAACATTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577967.1
CDS CAA 90 bp ACCAAAGAAAACTTGTATTTGGAAATATTGATTAGACATTCCTTGTaGTGCTCAGTACTGACTTTGGTATGTGTGTTCTGCTGTCCTGTT +
Preference number: 6 (lower is better)
Translates to: TKENLYLEILIRHSL*CSVLTLVCVFCCPV
Trigger: AACAGGACAGCAGAACACACATACCAAAGTCAGTACTGAGCACAACAAGGAATGTCTAATCAATATTTCCAAATACAAGTTTTCTTTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000431387.8
ENST00000487476.5
ENST00000489712.6
ENST00000579081.5
CDS CAA 72 bp AACTTGTATTTGGAAATATTGATTAGACATTCCTTGTaGTGCTCAGTACTGACTTTGGTATGTGTGTTCTGC +
Preference number: 6 (lower is better)
Translates to: NLYLEILIRHSL*CSVLTLVCVFC
Trigger: GCAGAACACACATACCAAAGTCAGTACTGAGCACAACAAGGAATGTCTAATCAATATTTCCAAATACAAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000431387.8
ENST00000487476.5
ENST00000489712.6
ENST00000579081.5
CDS CAA 72 bp GAAAACTTGTATTTGGAAATATTGATTAGACATTCCTaGTTGTGCTCAGTACTGACTTTGGTATGTGTGTTC +
Preference number: 6 (lower is better)
Translates to: ENLYLEILIRHS*LCSVLTLVCVF
Trigger: GAACACACATACCAAAGTCAGTACTGAGCACAACAAGGAATGTCTAATCAATATTTCCAAATACAAGTTTTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356175.7
ENST00000358273.9
ENST00000431387.8
ENST00000487476.5
ENST00000489712.6
ENST00000579081.5
CDS CAA 72 bp CTTACCTTATTCATGTTGTTTTCATCAACCACGTCTTaGGATATATCCTGGATTATTTCTGGACACAAGATA +
Preference number: 6 (lower is better)
Translates to: LTLFMLFSSTTS*DISWIISGHKI
Trigger: TATCTTGTGTCCAGAAATAATCCAGGATATATCCAAAGACGTGGTTGATGAAAACAACATGAATAAGGTAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490416.2
CDS CAA 72 bp AACAAATTTGGATCTTGGCACAATGATAACAGGGTGTaGATCTTAGAGTCCAACAAATTATGCCTAAAAGAA +
Preference number: 6 (lower is better)
Translates to: NKFGSWHNDNRV*ILESNKLCLKE
Trigger: TTCTTTTAGGCATAATTTGTTGGACTCTAAGATCAACACCCTGTTATCATTGTGCCAAGATCCAAATTTGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577967.1