Pregenerated sensors for NEUROD6 (Homo sapiens)
Ensembl gene IDs: ENSG00000164600Ensembl transcript IDs: ENST00000297142.4
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCCGAATTATGACATCAGCTACCCAAATATCATGTTGCCCCATCTaGAAATACTTGAAGAGGAATAGTTACCAATTGAATGCATTTAGA | + |
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Preference number: 1 (lower is better) Translates to: PRIMTSATQISCCPI*KYLKRNSYQLNAFR Trigger: TCTAAATGCATTCAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTGGGTAGCTGATGTCATAATTCGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| 3UTR-3UTR GCA 90 bp | ACCCAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAACAGCCCACAAGCATCTaGTTTGTCTTAATTAGACAG | + |
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Preference number: 2 (lower is better) Translates to: TQISCCPICKYLKRNSYQQPTSI*FVLIRQ Trigger: CTGTCTAATTAAGACAAAGCAGATGCTTGTGGGCTG...TTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| 3UTR-3UTR TCA 90 bp | AACACACTTCAGAAACTAGTAAACACCTTAGATAGAGTTGTGCCAATTACTCAGATTAGACAGGGGAGGTaGATGACCACTGTTTATTTT | + |
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Preference number: 2 (lower is better) Translates to: NTLQKLVNTLDRVVPITQIRQGR*MTTVYF Trigger: AAAATAAACAGTGGTCATTCACCTCCCCTGTCTAAT...CTGAGTAATTGGCACAACTCTATCTAAGGTGTTTACTAGTTTCTGAAGTGTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| 3UTR CAA 90 bp | ATGACATCAGCTACCCAAATATCATGTTGCCCCATCTGCAAATACTaGAAGAGGAATAGTTACCAATTGAATGCATTTAGATTCATCCTT | + |
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Preference number: 2 (lower is better) Translates to: MTSATQISCCPICKY*KRNSYQLNAFRFIL Trigger: AAGGATGAATCTAAATGCATTCAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTGGGTAGCTGATGTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| 3UTR-3UTR GCA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGGAAACAGAATCACAGTaGTTCACAGACAAAAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: QISCCPICKYLKRNSYQLETESQ*FTDKRK Trigger: TTTCCTTTTGTCTGTGAAGCACTGTGATTCTGTTTC...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR TCA 90 bp | ACCCAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAAGGAAACTCCTGGCGTTaGGCTGCAAGCAGCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: TQISCCPICKYLKRNSYQGNSWR*AASSLP Trigger: TGGCAGGCTGCTTGCAGCTCAACGCCAGGAGTTTCC...TTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR GCA 90 bp | AACACACTTCAGAAACTAGTAAACACCTTAGATAGAGTTGTGCCAATTACTCAGGCGTCGTTGAGGCCGTaGATCCTGTTCCTCTCGCGC | + |
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Preference number: 4 (lower is better) Translates to: NTLQKLVNTLDRVVPITQASLRP*ILFLSR Trigger: GCGCGAGAGGAACAGGATGCACGGCCTCAACGACGC...CTGAGTAATTGGCACAACTCTATCTAAGGTGTTTACTAGTTTCTGAAGTGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR GCA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGCTGAACATGGCACCCTaGCCAAGGGGACCCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: QISCCPICKYLKRNSYQLLNMAP*PRGPLG Trigger: ACCCAGGGGTCCCCTTGGGCAGGGTGCCATGTTCAG...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CCA 90 bp | ACCCAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAAGCCCAAGGGGACCCCTaGGTGGCACTGCACAGTAAT | + |
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Preference number: 4 (lower is better) Translates to: TQISCCPICKYLKRNSYQAQGDP*VALHSN Trigger: ATTACTGTGCAGTGCCACCCAGGGGTCCCCTTGGGC...TTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR TCA 90 bp | AACACACTTCAGAAACTAGTAAACACCTTAGATAGAGTTGTGCCAATTACTCAGTGTCCAGAGCGTCGTTaGGGCCGTGCATCCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: NTLQKLVNTLDRVVPITQCPERR*GRASCS Trigger: GGAACAGGATGCACGGCCTCAACGACGCTCTGGACA...CTGAGTAATTGGCACAACTCTATCTAAGGTGTTTACTAGTTTCTGAAGTGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR TCA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGTGTCGGTGGGCAACCTaGACATGGCACCCTGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: QISCCPICKYLKRNSYQLCRWAT*TWHPAQ Trigger: TTGGGCAGGGTGCCATGTTCAGGTTGCCCACCGACA...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR GCA 90 bp | AACACACTTCAGAAACTAGTAAACACCTTAGATAGAGTTGTGCCAATTACTCAGCTCCTGGCGTTGAGCTaGAAGCAGCCTGCCACCAAG | + |
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Preference number: 4 (lower is better) Translates to: NTLQKLVNTLDRVVPITQLLALS*KQPATK Trigger: CTTGGTGGCAGGCTGCTTGCAGCTCAACGCCAGGAG...CTGAGTAATTGGCACAACTCTATCTAAGGTGTTTACTAGTTTCTGAAGTGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CCA 90 bp | AACACACTTCAGAAACTAGTAAACACCTTAGATAGAGTTGTGCCAATTACTCAGAAGAGTCCCATGCCCTaGGGGAGTGGTGAGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: NTLQKLVNTLDRVVPITQKSPMP*GSGELR Trigger: CCTGAGCTCACCACTCCCCCAGGGCATGGGACTCTT...CTGAGTAATTGGCACAACTCTATCTAAGGTGTTTACTAGTTTCTGAAGTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CCA 90 bp | ACCCAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAAAGGGCTGTGGTAGGGTaGGTAGAAGGTAGAGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: TQISCCPICKYLKRNSYQRAVVG*VEGRVG Trigger: CCCTACTCTACCTTCTACCCACCCTACCACAGCCCT...TTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR TCA 90 bp | AACACACTTCAGAAACTAGTAAACACCTTAGATAGAGTTGTGCCAATTACTCAGCTCCAGGGGCCCTTTTaGTGCTCTTTCCTCGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: NTLQKLVNTLDRVVPITQLQGPF*CSFLEG Trigger: TCCTTCGAGGAAAGAGCATCAAAAGGGCCCCTGGAG...CTGAGTAATTGGCACAACTCTATCTAAGGTGTTTACTAGTTTCTGAAGTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR TCA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGGAAGGTAGAGTAGGGTaGCCTTGTGTGGTGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QISCCPICKYLKRNSYQLEGRVG*PCVVCS Trigger: GCTGCACACCACACAAGGTCACCCTACTCTACCTTC...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR GCA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGTTATCAAGAGTCCCATaGCCTGGGGGAGTGGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: QISCCPICKYLKRNSYQLLSRVP*PGGVVS Trigger: GCTCACCACTCCCCCAGGGCATGGGACTCTTGATAA...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR GCA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGACCCCTGGGTGGCACTaGACAGTAATGCATGCCGTA | + |
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Preference number: 4 (lower is better) Translates to: QISCCPICKYLKRNSYQLTPGWH*TVMHAV Trigger: TACGGCATGCATTACTGTGCAGTGCCACCCAGGGGT...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CCA 90 bp | AACACACTTCAGAAACTAGTAAACACCTTAGATAGAGTTGTGCCAATTACTCAGAAGGGGACCCCTGGGTaGCACTGCACAGTAATGCAT | + |
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Preference number: 4 (lower is better) Translates to: NTLQKLVNTLDRVVPITQKGTPG*HCTVMH Trigger: ATGCATTACTGTGCAGTGCCACCCAGGGGTCCCCTT...CTGAGTAATTGGCACAACTCTATCTAAGGTGTTTACTAGTTTCTGAAGTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CCA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGCTTCAAACTGAGGGCTaGCACACTCAGGGGAAGTAC | + |
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Preference number: 4 (lower is better) Translates to: QISCCPICKYLKRNSYQLLQTEG*HTQGKY Trigger: GTACTTCCCCTGAGTGTGCCAGCCCTCAGTTTGAAG...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR TCA 90 bp | AACACACTTCAGAAACTAGTAAACACCTTAGATAGAGTTGTGCCAATTACTCAGCAAATCTTTTCAGGCTaGGTGTCGCATCGTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: NTLQKLVNTLDRVVPITQQIFSG*VSHRLL Trigger: CAGGAGACGATGCGACACTCAGCCTGAAAAGATTTG...CTGAGTAATTGGCACAACTCTATCTAAGGTGTTTACTAGTTTCTGAAGTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR TCA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGAGTTTTGGACGAATGTaGGCAGATCTGGTCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: QISCCPICKYLKRNSYQLSFGRM*ADLVSC Trigger: GCAAGAGACCAGATCTGCTCACATTCGTCCAAAACT...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CCA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGGAATGTGAGCAGATCTaGTCTCTTGCCGATTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: QISCCPICKYLKRNSYQLECEQI*SLADSQ Trigger: CTGAGAATCGGCAAGAGACCAGATCTGCTCACATTC...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CCA 90 bp | ACCCAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAACACCAAGTTTGTAGTTaGCTGGGAAAGACCTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: TQISCCPICKYLKRNSYQHQVCS*LGKTFA Trigger: TGCAAAGGTCTTTCCCAGCCAACTACAAACTTGGTG...TTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CCA 90 bp | AACACACTTCAGAAACTAGTAAACACCTTAGATAGAGTTGTGCCAATTACTCAGTGCATTGTGAGAGATTaGCTGCGCAGATGTAAGTCG | + |
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Preference number: 4 (lower is better) Translates to: NTLQKLVNTLDRVVPITQCIVRD*LRRCKS Trigger: CGACTTACATCTGCGCAGCCAATCTCTCACAATGCA...CTGAGTAATTGGCACAACTCTATCTAAGGTGTTTACTAGTTTCTGAAGTGTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR TCA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGATTCATCTTGCATTGTaGGAGATTGGCTGCGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: QISCCPICKYLKRNSYQLIHLAL*EIGCAD Trigger: ATCTGCGCAGCCAATCTCTCACAATGCAAGATGAAT...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR GCA 90 bp | AACACACTTCAGAAACTAGTAAACACCTTAGATAGAGTTGTGCCAATTACTCAGGCAGATCTGGTCTCTTaGCGATTCTCAGAATTTCAG | + |
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Preference number: 4 (lower is better) Translates to: NTLQKLVNTLDRVVPITQADLVS*RFSEFQ Trigger: CTGAAATTCTGAGAATCGGCAAGAGACCAGATCTGC...CTGAGTAATTGGCACAACTCTATCTAAGGTGTTTACTAGTTTCTGAAGTGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CCA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGGCACATCTGGGATTCTaGCATTACAACAGACTCATC | + |
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Preference number: 4 (lower is better) Translates to: QISCCPICKYLKRNSYQLAHLGF*HYNRLI Trigger: GATGAGTCTGTTGTAATGCCAGAATCCCAGATGTGC...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR TCA 90 bp | ACCCAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAAATTGTCCCCGAATTATaGCATCAGCTACCCAAATAT | + |
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Preference number: 4 (lower is better) Translates to: TQISCCPICKYLKRNSYQIVPEL*HQLPKY Trigger: ATATTTGGGTAGCTGATGTCATAATTCGGGGACAAT...TTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR GCA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGTCTGGCTTCTTAATTTaGTTCTGGTCCTCGCATTCT | + |
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Preference number: 4 (lower is better) Translates to: QISCCPICKYLKRNSYQLSGFLI*FWSSHS Trigger: AGAATGCGAGGACCAGAAGCAAATTAAGAAGCCAGA...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR GCA 90 bp | ACCCAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAACAGAATTTCAGAAAGTaGCCAGATGTAGTTTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: TQISCCPICKYLKRNSYQQNFRK*PDVVFG Trigger: GCCAAAAACTACATCTGGGCACTTTCTGAAATTCTG...TTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR GCA 90 bp | AACACACTTCAGAAACTAGTAAACACCTTAGATAGAGTTGTGCCAATTACTCAGGCTGGGAAAGACCTTTaGATAAGTTTTGGACGAATG | + |
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Preference number: 4 (lower is better) Translates to: NTLQKLVNTLDRVVPITQAGKDL*ISFGRM Trigger: CATTCGTCCAAAACTTATGCAAAGGTCTTTCCCAGC...CTGAGTAATTGGCACAACTCTATCTAAGGTGTTTACTAGTTTCTGAAGTGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR GCA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGCAGCCCACAAGCATCTaGTTTGTCTTAATTAGACAG | + |
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Preference number: 4 (lower is better) Translates to: QISCCPICKYLKRNSYQLQPTSI*FVLIRQ Trigger: CTGTCTAATTAAGACAAAGCAGATGCTTGTGGGCTG...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR GCA 90 bp | ACCCAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATCATGTTGCCCCATCTaGAAATACTTGAAGAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: TQISCCPICKYLKRNSYQSCCPI*KYLKRN Trigger: ATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGA...TTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR GCA 90 bp | ACCCAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAAGAAACAGAATCACAGTaGTTCACAGACAAAAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: TQISCCPICKYLKRNSYQETESQ*FTDKRK Trigger: TTTCCTTTTGTCTGTGAAGCACTGTGATTCTGTTTC...TTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CCA 90 bp | AACACACTTCAGAAACTAGTAAACACCTTAGATAGAGTTGTGCCAATTACTCAGCCTTTGCATAAGTTTTaGACGAATGTGAGCAGATCT | + |
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Preference number: 4 (lower is better) Translates to: NTLQKLVNTLDRVVPITQPLHKF*TNVSRS Trigger: AGATCTGCTCACATTCGTCCAAAACTTATGCAAAGG...CTGAGTAATTGGCACAACTCTATCTAAGGTGTTTACTAGTTTCTGAAGTGTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CCA 90 bp | AACACACTTCAGAAACTAGTAAACACCTTAGATAGAGTTGTGCCAATTACTCAGAAGTTTGTAGTTGGCTaGGAAAGACCTTTGCATAAG | + |
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Preference number: 4 (lower is better) Translates to: NTLQKLVNTLDRVVPITQKFVVG*ERPLHK Trigger: CTTATGCAAAGGTCTTTCCCAGCCAACTACAAACTT...CTGAGTAATTGGCACAACTCTATCTAAGGTGTTTACTAGTTTCTGAAGTGTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| 3UTR CAA 72 bp | GCTACCCAAATATCATGTTGCCCCATCTGCAAATACTaGAAGAGGAATAGTTACCAATTGAATGCATTTAGA | + |
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Preference number: 4 (lower is better) Translates to: ATQISCCPICKY*KRNSYQLNAFR Trigger: TCTAAATGCATTCAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTGGGTAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR GCA 90 bp | ACCCAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAAAGATCTGTGTATATCTaGACTATCTCATTGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: TQISCCPICKYLKRNSYQRSVYI*TISLIS Trigger: AGAGATCAATGAGATAGTGCAGATATACACAGATCT...TTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTGGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR GCA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGAGGATTCATACGCACTaGAATAATTGTAGGGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: QISCCPICKYLKRNSYQLRIHTH*NNCRVS Trigger: TGAAACCCTACAATTATTGCAGTGCGTATGAATCCT...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR GCA 90 bp | ACCCAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAACTGCACAGTAATGCATaGCGTAATTGTAATTTTTAC | + |
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Preference number: 4 (lower is better) Translates to: TQISCCPICKYLKRNSYQLHSNA*RNCNFY Trigger: GTAAAAATTACAATTACGGCATGCATTACTGTGCAG...TTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTGGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CCA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGTTCTTAATTTGCTTCTaGTCCTCGCATTCTCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: QISCCPICKYLKRNSYQLFLICF*SSHSLE Trigger: TTCTAGAGAATGCGAGGACCAGAAGCAAATTAAGAA...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CCA 90 bp | ACCCAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAAAATTGTAGGGTTTCATaGACTTGGAATTATCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: TQISCCPICKYLKRNSYQNCRVS*TWNYQE Trigger: CTCTTGATAATTCCAAGTCCATGAAACCCTACAATT...TTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTGGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS TCA 90 bp | TGCGCAGATGTAAGTCGTAAGGGAAGTGGCTGTCGGTGGGCAACCTaGACATGGCACCCTGCCCAAGGGGACCCCTGGGTGGCACTGCAC | + |
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Preference number: 5 (lower is better) Translates to: CADVSRKGSGCRWAT*TWHPAQGDPWVALH Trigger: GTGCAGTGCCACCCAGGGGTCCCCTTGGGCAGGGTGCCATGTTCAGGTTGCCCACCGACAGCCACTTCCCTTACGACTTACATCTGCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS CCA 90 bp | GCCACCAAGTTTGTAGTTGGCTGGGAAAGACCTTTGCATAAGTTTTaGACGAATGTGAGCAGATCTGGTCTCTTGCCGATTCTCAGAATT | + |
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Preference number: 5 (lower is better) Translates to: ATKFVVGWERPLHKF*TNVSRSGLLPILRI Trigger: AATTCTGAGAATCGGCAAGAGACCAGATCTGCTCACATTCGTCCAAAACTTATGCAAAGGTCTTTCCCAGCCAACTACAAACTTGGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CAA 90 bp | AACACACTTCAGAAACTAGTAAACACCTTAGATAGAGTTGTGCCAATTACTCAGTTGTCCAGAGCGTCGTaGAGGCCGTGCATCCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: NTLQKLVNTLDRVVPITQLSRAS*RPCILF Trigger: GAACAGGATGCACGGCCTCAACGACGCTCTGGACAA...CTGAGTAATTGGCACAACTCTATCTAAGGTGTTTACTAGTTTCTGAAGTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CAA 90 bp | AACACACTTCAGAAACTAGTAAACACCTTAGATAGAGTTGTGCCAATTACTCAGTCTCCAGGGGCCCTTTaGATGCTCTTTCCTCGAAGG | + |
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Preference number: 5 (lower is better) Translates to: NTLQKLVNTLDRVVPITQSPGAL*MLFPRR Trigger: CCTTCGAGGAAAGAGCATCAAAAGGGCCCCTGGAGA...CTGAGTAATTGGCACAACTCTATCTAAGGTGTTTACTAGTTTCTGAAGTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CAA 90 bp | ACCCAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATCCTGTCTCCTGAACTaGACCCTTTCCAATCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TQISCCPICKYLKRNSYQSCLLN*TLSNRS Trigger: GCTGCGATTGGAAAGGGTCAAGTTCAGGAGACAGGA...TTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS GCA 90 bp | CCTCGAAGGACAATCTGTTTGGAAAAGCTTTCTGGCTTCTTAATTTaGTTCTGGTCCTCGCATTCTCTAGAAAACTTTCTGCACATCTGG | + |
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Preference number: 5 (lower is better) Translates to: PRRTICLEKLSGFLI*FWSSHSLENFLHIW Trigger: CCAGATGTGCAGAAAGTTTTCTAGAGAATGCGAGGACCAGAAGCAAATTAAGAAGCCAGAAAGCTTTTCCAAACAGATTGTCCTTCGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CAA 90 bp | ACCCAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTCTGGCTTCTTAATTaGCTTCTGGTCCTCGCATTC | + |
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Preference number: 5 (lower is better) Translates to: TQISCCPICKYLKRNSYQFWLLN*LLVLAF Trigger: GAATGCGAGGACCAGAAGCAAATTAAGAAGCCAGAA...TTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CAA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGACCACTTTTCTTAAGTaGTCCAGAGCGTCGTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: QISCCPICKYLKRNSYQLTTFLK*SRASLR Trigger: CCTCAACGACGCTCTGGACAACTTAAGAAAAGTGGT...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CAA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGCGAAGGACAATCTGTTaGGAAAAGCTTTCTGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: QISCCPICKYLKRNSYQLRRTIC*EKLSGF Trigger: GAAGCCAGAAAGCTTTTCCAAACAGATTGTCCTTCG...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CAA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGAGCAGATCTGGTCTCTaGCCGATTCTCAGAATTTCA | + |
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Preference number: 5 (lower is better) Translates to: QISCCPICKYLKRNSYQLSRSGL*PILRIS Trigger: TGAAATTCTGAGAATCGGCAAGAGACCAGATCTGCT...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CAA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGGGCTGGGAAAGACCTTaGCATAAGTTTTGGACGAAT | + |
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Preference number: 5 (lower is better) Translates to: QISCCPICKYLKRNSYQLGWERP*HKFWTN Trigger: ATTCGTCCAAAACTTATGCAAAGGTCTTTCCCAGCC...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CAA 90 bp | CAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATTGGTCCAAGGTTTCTTCTaGCTTCAGGGAAAATATCCC | + |
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Preference number: 5 (lower is better) Translates to: QISCCPICKYLKRNSYQLVQGFF*LQGKYP Trigger: GGGATATTTTCCCTGAAGCAAGAAGAAACCTTGGAC...CAATTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CAA 90 bp | ACCCAAATATCATGTTGCCCCATCTGCAAATACTTGAAGAGGAATAGTTACCAATACCCAAATATCATGTaGCCCCATCTGCAAATACTT | + |
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Preference number: 5 (lower is better) Translates to: TQISCCPICKYLKRNSYQYPNIM*PHLQIL Trigger: AAGTATTTGCAGATGGGGCAACATGATATTTGGGTA...TTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGGGCAACATGATATTTGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CAA 90 bp | AACACACTTCAGAAACTAGTAAACACCTTAGATAGAGTTGTGCCAATTACTCAGCCCATCTGCAAATACTaGAAGAGGAATAGTTACCAA | + |
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Preference number: 5 (lower is better) Translates to: NTLQKLVNTLDRVVPITQPICKY*KRNSYQ Trigger: TTGGTAACTATTCCTCTTCAAGTATTTGCAGATGGG...CTGAGTAATTGGCACAACTCTATCTAAGGTGTTTACTAGTTTCTGAAGTGTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS-3UTR CAA 90 bp | AACACACTTCAGAAACTAGTAAACACCTTAGATAGAGTTGTGCCAATTACTCAGCGTAAAGTCTCTATTTaGGACAGTTTCTGGGTTTTA | + |
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Preference number: 5 (lower is better) Translates to: NTLQKLVNTLDRVVPITQRKVSI*DSFWVL Trigger: TAAAACCCAGAAACTGTCCAAAATAGAGACTTTACG...CTGAGTAATTGGCACAACTCTATCTAAGGTGTTTACTAGTTTCTGAAGTGTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS TCA 72 bp | GTAAGTCGTAAGGGAAGTGGCTGTCGGTGGGCAACCTaGACATGGCACCCTGCCCAAGGGGACCCCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: VSRKGSGCRWAT*TWHPAQGDPWV Trigger: CACCCAGGGGTCCCCTTGGGCAGGGTGCCATGTTCAGGTTGCCCACCGACAGCCACTTCCCTTACGACTTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS TCA 72 bp | AGGGGACCACTTTTCTTAAGTTGTCCAGAGCGTCGTTaGGGCCGTGCATCCTGTTCCTCTCGCGCGCGTTCG | + |
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Preference number: 6 (lower is better) Translates to: RGPLFLSCPERR*GRASCSSRARS Trigger: CGAACGCGCGCGAGAGGAACAGGATGCACGGCCTCAACGACGCTCTGGACAACTTAAGAAAAGTGGTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS CAA 72 bp | CAGGGGACCACTTTTCTTAAGTTGTCCAGAGCGTCGTaGAGGCCGTGCATCCTGTTCCTCTCGCGCGCGTTC | + |
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Preference number: 6 (lower is better) Translates to: QGTTFLKLSRAS*RPCILFLSRAF Trigger: GAACGCGCGCGAGAGGAACAGGATGCACGGCCTCAACGACGCTCTGGACAACTTAAGAAAAGTGGTCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS CCA 72 bp | CCTGAACATGGCACCCTGCCCAAGGGGACCCCTGGGTaGCACTGCACAGTAATGCATGCCGTAATTGTAATT | + |
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Preference number: 6 (lower is better) Translates to: PEHGTLPKGTPG*HCTVMHAVIVI Trigger: AATTACAATTACGGCATGCATTACTGTGCAGTGCCACCCAGGGGTCCCCTTGGGCAGGGTGCCATGTTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS CCA 72 bp | TTGGGGGAGGACTTAAGGGACCTTCAAACTGAGGGCTaGCACACTCAGGGGAAGTACTTTCATAGAAGGATT | + |
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Preference number: 6 (lower is better) Translates to: LGEDLRDLQTEG*HTQGKYFHRRI Trigger: AATCCTTCTATGAAAGTACTTCCCCTGAGTGTGCCAGCCCTCAGTTTGAAGGTCCCTTAAGTCCTCCCCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS CCA 72 bp | AGCTGCAAGCAGCCTGCCACCAAGTTTGTAGTTGGCTaGGAAAGACCTTTGCATAAGTTTTGGACGAATGTG | + |
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Preference number: 6 (lower is better) Translates to: SCKQPATKFVVG*ERPLHKFWTNV Trigger: CACATTCGTCCAAAACTTATGCAAAGGTCTTTCCCAGCCAACTACAAACTTGGTGGCAGGCTGCTTGCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS TCA 72 bp | CTTCTTCTTTCTCGGTTTCTTCTCCAGGGGCCCTTTTaGTGCTCTTTCCTCGAAGGACAATCTGTTTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: LLLSRFLLQGPF*CSFLEGQSVWK Trigger: TTTCCAAACAGATTGTCCTTCGAGGAAAGAGCATCAAAAGGGCCCCTGGAGAAGAAACCGAGAAAGAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS CCA 72 bp | AGGATTCATACGCACTGCAATAATTGTAGGGTTTCATaGACTTGGAATTATCAAGAGTCCCATGCCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: RIHTHCNNCRVS*TWNYQESHALG Trigger: CCCCAGGGCATGGGACTCTTGATAATTCCAAGTCCATGAAACCCTACAATTATTGCAGTGCGTATGAATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS TCA 72 bp | GCTGGGAAAGACCTTTGCATAAGTTTTGGACGAATGTaGGCAGATCTGGTCTCTTGCCGATTCTCAGAATTT | + |
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Preference number: 6 (lower is better) Translates to: AGKDLCISFGRM*ADLVSCRFSEF Trigger: AAATTCTGAGAATCGGCAAGAGACCAGATCTGCTCACATTCGTCCAAAACTTATGCAAAGGTCTTTCCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS CAA 72 bp | CATAAGTTTTGGACGAATGTGAGCAGATCTGGTCTCTaGCCGATTCTCAGAATTTCAGAAAGTGCCCAGATG | + |
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Preference number: 6 (lower is better) Translates to: HKFWTNVSRSGL*PILRISESAQM Trigger: CATCTGGGCACTTTCTGAAATTCTGAGAATCGGCAAGAGACCAGATCTGCTCACATTCGTCCAAAACTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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| CDS CAA 90 bp | TCCTCGAAGGACAATCTGTTTGGAAAAGCTTTCTGGCTTCTTAATTaGCTTCTGGTCCTCGCATTCTCTAGAAAACTTTCTGCACATCTG | + |
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Preference number: 6 (lower is better) Translates to: SSKDNLFGKAFWLLN*LLVLAFSRKLSAHL Trigger: CAGATGTGCAGAAAGTTTTCTAGAGAATGCGAGGACCAGAAGCAAATTAAGAAGCCAGAAAGCTTTTCCAAACAGATTGTCCTTCGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297142.4 |
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