RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NEU3 (Homo sapiens)

Ensembl gene IDs: ENSG00000162139

Ensembl transcript IDs: ENST00000294064.9, ENST00000529024.1, ENST00000531509.5, ENST00000532963.1, ENST00000534628.1

Found 506 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAACCATGTGGGGGCTCACAGAGCTGTCGACTCAGGGCCAGTCTCTaGAAGCCTTCACCATGGTCAGTGCTGAGCGCCTCTGCCCGGCAC +
Preference number: 1 (lower is better)
Translates to: QPCGGSQSCRLRASL*KPSPWSVLSASARH
Trigger: GTGCCGGGCAGAGGCGCTCAGCACTGACCATGGTGAAGGCTTTCAGAGACTGGCCCTGAGTCGACAGCTCTGTGAGCCCCCACATGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR TCA 90 bp GTCGACTCAGGGCCAGTCTCTGAAAGCCTTCACCATGGTCAGTGCTaGGCGCCTCTGCCCGGCACCTGTTTGGTGTCCGGGCACTGCAAT +
Preference number: 1 (lower is better)
Translates to: VDSGPVSESLHHGQC*APLPGTCLVSGHCN
Trigger: ATTGCAGTGCCCGGACACCAAACAGGTGCCGGGCAGAGGCGCTCAGCACTGACCATGGTGAAGGCTTTCAGAGACTGGCCCTGAGTCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR CCA 90 bp GATCTCCAGGGGCCGGAAACTTACCACACTCCCTTGGCAACCATGTaGGGGCTCACAGAGCTGTCGACTCAGGGCCAGTCTCTGAAAGCC +
Preference number: 1 (lower is better)
Translates to: DLQGPETYHTPLATM*GLTELSTQGQSLKA
Trigger: GGCTTTCAGAGACTGGCCCTGAGTCGACAGCTCTGTGAGCCCCCACATGGTTGCCAAGGGAGTGTGGTAAGTTTCCGGCCCCTGGAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR CCA 90 bp CACCTATGTGGGATCTCCAGGGGCCGGAAACTTACCACACTCCCTTaGCAACCATGTGGGGGCTCACAGAGCTGTCGACTCAGGGCCAGT +
Preference number: 1 (lower is better)
Translates to: HLCGISRGRKLTTLP*QPCGGSQSCRLRAS
Trigger: ACTGGCCCTGAGTCGACAGCTCTGTGAGCCCCCACATGGTTGCCAAGGGAGTGTGGTAAGTTTCCGGCCCCTGGAGATCCCACATAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR TCA 90 bp AATTGGCTTGGGTTCCTACCAGGGCTGGTGCAGTCCCCCTGCAGGTaGCTCAGGATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTGC +
Preference number: 1 (lower is better)
Translates to: NWLGFLPGLVQSPCR*LRISRCVNRRKAIC
Trigger: GCAGATTGCCTTCCGCCTGTTTACACACCGGGAGATCCTGAGTCACCTGCAGGGGGACTGCACCAGCCCTGGTAGGAACCCAAGCCAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR TCA 90 bp CCAGGAAGGGATGTAGTAGGTATACGCAGGGATGACCAGTCTCCCTaGCTGCAGCTGGATGCCATGACCTGGGCCCACAGCAAATGTGGC +
Preference number: 1 (lower is better)
Translates to: PGRDVVGIRRDDQSP*LQLDAMTWAHSKCG
Trigger: GCCACATTTGCTGTGGGCCCAGGTCATGGCATCCAGCTGCAGTCAGGGAGACTGGTCATCCCTGCGTATACCTACTACATCCCTTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR TCA 90 bp AGATCCAGGGGCGGGACCAGCAGGCAGCCTCCAAGGGGGTCTGGTTaGGATAGATACCTAGGTCAACCCTCTGTTTCCTACTGGTTGGGT +
Preference number: 1 (lower is better)
Translates to: RSRGGTSRQPPRGSG*DRYLGQPSVSYWLG
Trigger: ACCCAACCAGTAGGAAACAGAGGGTTGACCTAGGTATCTATCTCAACCAGACCCCCTTGGAGGCTGCCTGCTGGTCCCGCCCCTGGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR TCA 90 bp CCAGCTTCCTCCTCCAGCCTCAGTGAACTGCCTGGAGAGCTCTGCTaGATGGTGGGTGCATCTTTGCTGCTAGAGTCCTGGCACCTATGT +
Preference number: 1 (lower is better)
Translates to: PASSSSLSELPGELC*MVGASLLLESWHLC
Trigger: ACATAGGTGCCAGGACTCTAGCAGCAAAGATGCACCCACCATTCAGCAGAGCTCTCCAGGCAGTTCACTGAGGCTGGAGGAGGAAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR CCA 90 bp CTGAATGGTGGGTGCATCTTTGCTGCTAGAGTCCTGGCACCTATGTaGGATCTCCAGGGGCCGGAAACTTACCACACTCCCTTGGCAACC +
Preference number: 1 (lower is better)
Translates to: LNGGCIFAARVLAPM*DLQGPETYHTPLAT
Trigger: GGTTGCCAAGGGAGTGTGGTAAGTTTCCGGCCCCTGGAGATCCCACATAGGTGCCAGGACTCTAGCAGCAAAGATGCACCCACCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR TCA 90 bp GCTGGAAGGATCCATTCTGAGTCCAAGGGACAGGAAGGGGGCTCCTaGGGGCAAAGAACAGAGGCCTATGTAGTCCTCTCTACATGCCTG +
Preference number: 1 (lower is better)
Translates to: AGRIHSESKGQEGGS*GQRTEAYVVLSTCL
Trigger: CAGGCATGTAGAGAGGACTACATAGGCCTCTGTTCTTTGCCCTCAGGAGCCCCCTTCCTGTCCCTTGGACTCAGAATGGATCCTTCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR GCA 90 bp ATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTGCTCACACTCTTaGTTGGTCCCACATTCAAACAAACACCCAAACAAGCCCTCCTCC +
Preference number: 1 (lower is better)
Translates to: ISRCVNRRKAICSHS*LVPHSNKHPNKPSS
Trigger: GGAGGAGGGCTTGTTTGGGTGTTTGTTTGAATGTGGGACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR CCA 90 bp CCACCTGCCCTGTCTTTTCCATCCTATCAATCTGAGTGGCTGAAATaGGTTCAGTTAGGGTACCACTATCATGGAATAGGTCCCAGGGCC +
Preference number: 1 (lower is better)
Translates to: PPALSFPSYQSEWLK*VQLGYHYHGIGPRA
Trigger: GGCCCTGGGACCTATTCCATGATAGTGGTACCCTAACTGAACCCATTTCAGCCACTCAGATTGATAGGATGGAAAAGACAGGGCAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR CCA 90 bp TATGGAAATTGGGTCCTAAGCCAATTAATTGCTTTTGAATTGGCTTaGGTTCCTACCAGGGCTGGTGCAGTCCCCCTGCAGGTGACTCAG +
Preference number: 1 (lower is better)
Translates to: YGNWVLSQLIAFELA*VPTRAGAVPLQVTQ
Trigger: CTGAGTCACCTGCAGGGGGACTGCACCAGCCCTGGTAGGAACCCAAGCCAATTCAAAAGCAATTAATTGGCTTAGGACCCAATTTCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR GCA 90 bp GTGAGTGTTCAGCAGGTTTTGAATGCTACACAATCTACAAAGGGATaGAACATCCTTCTCCCTACAGCGGAACTCCCCCTAGCCTTCTCA +
Preference number: 1 (lower is better)
Translates to: VSVQQVLNATQSTKG*NILLPTAELPLAFS
Trigger: TGAGAAGGCTAGGGGGAGTTCCGCTGTAGGGAGAAGGATGTTGCATCCCTTTGTAGATTGTGTAGCATTCAAAACCTGCTGAACACTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR GCA 90 bp CAATTTAGAGATGGACCTCTTATGAGTACTGGTATTATACATCTCTaGGTCACAGTGGCACAGACCAAGGTCCCTGCCTTGACTCCCTTC +
Preference number: 1 (lower is better)
Translates to: QFRDGPLMSTGIIHL*VTVAQTKVPALTPF
Trigger: GAAGGGAGTCAAGGCAGGGACCTTGGTCTGTGCCACTGTGACGCAGAGATGTATAATACCAGTACTCATAAGAGGTCCATCTCTAAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR CCA 90 bp CAGCTGCTACCACCTGCCCTGTCTTTTCCATCCTATCAATCTGAGTaGCTGAAATGGGTTCAGTTAGGGTACCACTATCATGGAATAGGT +
Preference number: 1 (lower is better)
Translates to: QLLPPALSFPSYQSE*LKWVQLGYHYHGIG
Trigger: ACCTATTCCATGATAGTGGTACCCTAACTGAACCCATTTCAGCCACTCAGATTGATAGGATGGAAAAGACAGGGCAGGTGGTAGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR TCA 90 bp TTCACAGCTGCTACCACCTGCCCTGTCTTTTCCATCCTATCAATCTaGGTGGCTGAAATGGGTTCAGTTAGGGTACCACTATCATGGAAT +
Preference number: 1 (lower is better)
Translates to: FTAATTCPVFSILSI*VAEMGSVRVPLSWN
Trigger: ATTCCATGATAGTGGTACCCTAACTGAACCCATTTCAGCCACTCAGATTGATAGGATGGAAAAGACAGGGCAGGTGGTAGCAGCTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR GCA 90 bp AGCCCTGGTTGTACGACTTGGCCATCCTCCCTATTCCTATCCACTTaGAGTACAGTGTTCAGGAAAGCTTTGCTAAACAAGGAGTTTCTA +
Preference number: 1 (lower is better)
Translates to: SPGCTTWPSSLFLST*STVFRKALLNKEFL
Trigger: TAGAAACTCCTTGTTTAGCAAAGCTTTCCTGAACACTGTACTGCAAGTGGATAGGAATAGGGAGGATGGCCAAGTCGTACAACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR TCA 90 bp GTCTCTAGGGAGTTCCAAACTTTTCCACATTTTTCTCTCTTCTTCTaGGCCCTCCAAACTGTTCCAACTTCTGCCTGTTACCAAGTTCCA +
Preference number: 1 (lower is better)
Translates to: VSREFQTFPHFSLFF*ALQTVPTSACYQVP
Trigger: TGGAACTTGGTAACAGGCAGAAGTTGGAACAGTTTGGAGGGCTCAGAAGAAGAGAGAAAAATGTGGAAAAGTTTGGAACTCCCTAGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529024.1
3UTR GCA 90 bp ACATCAGAGTCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATaGAGGCACTATGCTTGTCCTAGGGATGAGAAGATGAGAAATCTT +
Preference number: 1 (lower is better)
Translates to: TSESFMQPGLTDHEA*RHYACPRDEKMRNL
Trigger: AAGATTTCTCATCTTCTCATCCCTAGGACAAGCATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGACTCTGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
3UTR CCA 90 bp TTGATATTCTCATTCTTTTCATCCTTTAGCCCTGGTTGTACGACTTaGCCATCCTCCCTATTCCTATCCACTTGCAGTACAGTGTTCAGG +
Preference number: 1 (lower is better)
Translates to: LIFSFFSSFSPGCTT*PSSLFLSTCSTVFR
Trigger: CCTGAACACTGTACTGCAAGTGGATAGGAATAGGGAGGATGGCCAAGTCGTACAACCAGGGCTAAAGGATGAAAAGAATGAGAATATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR CCA 90 bp AAAGCCAAGACACAGTCAGAACACATCAAGCCTCAGAATCTCCCTTaGAGGCCTGGAAAACTAGTAACTATAGAAAACCCAATTAGGGAC +
Preference number: 1 (lower is better)
Translates to: KAKTQSEHIKPQNLP*RPGKLVTIENPIRD
Trigger: GTCCCTAATTGGGTTTTCTATAGTTACTAGTTTTCCAGGCCTCCAAGGGAGATTCTGAGGCTTGATGTGTTCTGACTGTGTCTTGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR TCA 90 bp ATGAGAAATCTTAGAACCAATACTCTCATTTTACAGATGGAAACCTaGGGTCCAGAGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAA +
Preference number: 1 (lower is better)
Translates to: MRNLRTNTLILQMET*GPESSGDTSKVQKQ
Trigger: TTGCTTTTGGACCTTGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAGTATTGGTTCTAAGATTTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
3UTR GCA 90 bp ACATTTTTCTCTCTTCTTCTGAGCCCTCCAAACTGTTCCAACTTCTaGCTGTTACCAAGTTCCAAAGTAGTTTCCACATTTTTGGGTATC +
Preference number: 1 (lower is better)
Translates to: TFFSLLLSPPNCSNF*LLPSSKVVSTFLGI
Trigger: GATACCCAAAAATGTGGAAACTACTTTGGAACTTGGTAACAGGCAGAAGTTGGAACAGTTTGGAGGGCTCAGAAGAAGAGAGAAAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529024.1
3UTR CCA 90 bp GCTTCTGTTAACCTGTCTGTAACTGCCATTTGCATCTATGGAAATTaGGTCCTAAGCCAATTAATTGCTTTTGAATTGGCTTGGGTTCCT +
Preference number: 1 (lower is better)
Translates to: ASVNLSVTAICIYGN*VLSQLIAFELAWVP
Trigger: AGGAACCCAAGCCAATTCAAAAGCAATTAATTGGCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTTAACAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR TCA 90 bp ATCATGAAGCATGCAGGCACTATGCTTGTCCTAGGGATGAGAAGATaGGAAATCTTAGAACCAATACTCTCATTTTACAGATGGAAACCT +
Preference number: 1 (lower is better)
Translates to: IMKHAGTMLVLGMRR*EILEPILSFYRWKP
Trigger: AGGTTTCCATCTGTAAAATGAGAGTATTGGTTCTAAGATTTCTCATCTTCTCATCCCTAGGACAAGCATAGTGCCTGCATGCTTCATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
3UTR CCA 90 bp GTTGTTTCAAAGAACGATGGTAGTTTTTATAGTACAGAGTATTTCTaGCACTCAGCATCACAAAGCCAAGACACAGTCAGAACACATCAA +
Preference number: 1 (lower is better)
Translates to: VVSKNDGSFYSTEYF*HSASQSQDTVRTHQ
Trigger: TTGATGTGTTCTGACTGTGTCTTGGCTTTGTGATGCTGAGTGCCAGAAATACTCTGTACTATAAAAACTACCATCGTTCTTTGAAACAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR GCA 90 bp GTCCCCCTGCAGGTGACTCAGGATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCCACAGGGCCCACAGTaGAAGATCCAGGGGCGGGAC +
Preference number: 2 (lower is better)
Translates to: VPLQVTQDLPVCKQAEGNPQGPQ*KIQGRD
Trigger: GTCCCGCCCCTGGATCTTGCACTGTGGGCCCTGTGG...ATTGCCTTCCGCCTGTTTACACACCGGGAGATCCTGAGTCACCTGCAGGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR CAA 90 bp GCACCTATGTGGGATCTCCAGGGGCCGGAAACTTACCACACTCCCTaGGCAACCATGTGGGGGCTCACAGAGCTGTCGACTCAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: APMWDLQGPETYHTP*ATMWGLTELSTQGQ
Trigger: CTGGCCCTGAGTCGACAGCTCTGTGAGCCCCCACATGGTTGCCAAGGGAGTGTGGTAAGTTTCCGGCCCCTGGAGATCCCACATAGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR GCA 90 bp GTCCTGGCACCTATGTGGGATCTCCAGGGGCCGGAAACTTACCACACTCCCTTGCTGACTGCAGCTGGATaGCATGACCTGGGCCCACAG +
Preference number: 2 (lower is better)
Translates to: VLAPMWDLQGPETYHTPLLTAAG*HDLGPQ
Trigger: CTGTGGGCCCAGGTCATGGCATCCAGCTGCAGTCAG...CAAGGGAGTGTGGTAAGTTTCCGGCCCCTGGAGATCCCACATAGGTGCCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR TCA 90 bp AAGCCTTCACCATGGTCAGTGCTGAGCGCCTCTGCCCGGCACCTGTTTGGTGTCAGGTATACGCAGGGATaGCCAGTCTCCCTGACTGCA +
Preference number: 2 (lower is better)
Translates to: KPSPWSVLSASARHLFGVRYTQG*PVSLTA
Trigger: TGCAGTCAGGGAGACTGGTCATCCCTGCGTATACCT...GACACCAAACAGGTGCCGGGCAGAGGCGCTCAGCACTGACCATGGTGAAGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR TCA 90 bp GTCCCCCTGCAGGTGACTCAGGATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTCAGGGCCAGTCTCTaGAAGCCTTCACCATGGTCA +
Preference number: 2 (lower is better)
Translates to: VPLQVTQDLPVCKQAEGNLRASL*KPSPWS
Trigger: TGACCATGGTGAAGGCTTTCAGAGACTGGCCCTGAG...ATTGCCTTCCGCCTGTTTACACACCGGGAGATCCTGAGTCACCTGCAGGGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR TCA 90 bp AAGCCTTCACCATGGTCAGTGCTGAGCGCCTCTGCCCGGCACCTGTTTGGTGTCTCCAGAGAGTTCAGGTaGCACATCCAAGGTCCAAAA +
Preference number: 2 (lower is better)
Translates to: KPSPWSVLSASARHLFGVSREFR*HIQGPK
Trigger: TTTTGGACCTTGGATGTGTCACCTGAACTCTCTGGA...GACACCAAACAGGTGCCGGGCAGAGGCGCTCAGCACTGACCATGGTGAAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR CCA 90 bp ATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTGCTCACACTCTTGCTTGGTCGGCCCACAGCAAATGTaGCCCAGTGCTTCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: ISRCVNRRKAICSHSCLVGPQQM*PSASAL
Trigger: CAGAGCTGAAGCACTGGGCCACATTTGCTGTGGGCC...GACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR CCA 90 bp ATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTGCTCACACTCTTGCTTGGTCCAATATAGCACAGGGTaGCCAGCCCTCCCAGTCACC +
Preference number: 2 (lower is better)
Translates to: ISRCVNRRKAICSHSCLVQYSTG*PALPVT
Trigger: GGTGACTGGGAGGGCTGGCCACCCTGTGCTATATTG...GACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR CCA 90 bp ATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTGCTCACACTCTTGCTTGGTCTGCCCGGCACCTGTTTaGTGTCCGGGCACTGCAATA +
Preference number: 2 (lower is better)
Translates to: ISRCVNRRKAICSHSCLVCPAPV*CPGTAI
Trigger: TATTGCAGTGCCCGGACACCAAACAGGTGCCGGGCA...GACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR TCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCAGTGCTTCAGCTCTaGGCCAATGACCTCCTCAGT +
Preference number: 2 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGPVLQL*ANDLLS
Trigger: ACTGAGGAGGTCATTGGCTCAGAGCTGAAGCACTGG...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR GCA 90 bp ATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTGCTCACACTCTTGCTTGGTCCCAGCCTCAGTGAACTaGCTGGAGAGCTCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: ISRCVNRRKAICSHSCLVPASVN*LESSAE
Trigger: TTCAGCAGAGCTCTCCAGGCAGTTCACTGAGGCTGG...GACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR CCA 90 bp AGGCGGAAGGCAATCTGCTCACACTCTTGCTTGGTCCCACATTCAAACAAACACGTCCTGGCACCTATGTaGGATCTCCAGGGGCCGGAA +
Preference number: 2 (lower is better)
Translates to: RRKAICSHSCLVPHSNKHVLAPM*DLQGPE
Trigger: TTCCGGCCCCTGGAGATCCCACATAGGTGCCAGGAC...GTGTTTGTTTGAATGTGGGACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR CAA 90 bp TCCCGGTGTGTAAACAGGCGGAAGGCAATCTGCTCACACTCTTGCTaGGTCCCACATTCAAACAAACACCCAAACAAGCCCTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: SRCVNRRKAICSHSC*VPHSNKHPNKPSSS
Trigger: GGAGGAGGAGGGCTTGTTTGGGTGTTTGTTTGAATGTGGGACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCTGTTTACACACCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR TCA 90 bp TCTACTGTAACCATGGGCCTAATGAGTCTACCATGGTGCCATGTGACCCCTAGGTCAGCTCTGAGCCAATaGCCTCCTCAGTCAAGTCCC +
Preference number: 2 (lower is better)
Translates to: STVTMGLMSLPWCHVTPRSALSQ*PPQSSP
Trigger: GGGACTTGACTGAGGAGGTCATTGGCTCAGAGCTGA...CCTAGGGGTCACATGGCACCATGGTAGACTCATTAGGCCCATGGTTACAGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR CCA 90 bp ATACATCTCTGCGTCACAGTGGCACAGACCAAGGTCCCTGCCTTGACTCCCTTCATTTCACCCAACAGCTaGAAGGTCCTACATGCCAGG +
Preference number: 2 (lower is better)
Translates to: IHLCVTVAQTKVPALTPFISPNS*KVLHAR
Trigger: CCTGGCATGTAGGACCTTCCAGCTGTTGGGTGAAAT...GAAGGGAGTCAAGGCAGGGACCTTGGTCTGTGCCACTGTGACGCAGAGATGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR CCA 90 bp ATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTGCTCACACTCTTGCTTGGTCGAGAGCTCTGCTGAATaGTGGGTGCATCTTTGCTGC +
Preference number: 2 (lower is better)
Translates to: ISRCVNRRKAICSHSCLVESSAE*WVHLCC
Trigger: GCAGCAAAGATGCACCCACCATTCAGCAGAGCTCTC...GACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR CAA 90 bp GATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTGCTCACACTCTaGCTTGGTCCCACATTCAAACAAACACCCAAACAAGCCCTCCTC +
Preference number: 2 (lower is better)
Translates to: DLPVCKQAEGNLLTL*LGPTFKQTPKQALL
Trigger: GAGGAGGGCTTGTTTGGGTGTTTGTTTGAATGTGGGACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR GCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCCAACTCCTAGTTCAGTaGTCTTTCCACTGCAGTAGC +
Preference number: 2 (lower is better)
Translates to: SSGDTSKVQKQASGRARTQLLVQ*SFHCSS
Trigger: GCTACTGCAGTGGAAAGAGCACTGAACTAGGAGTTG...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
3UTR-3UTR GCA 90 bp GCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACACATCAGAGTCCTTTATaGAGCCAGGACTTACTGATC +
Preference number: 2 (lower is better)
Translates to: AKCRPVQVSLPSHRFQGTHQSPL*SQDLLI
Trigger: GATCAGTAAGTCCTGGCTGCATAAAGGACTCTGATG...TGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR GCA 90 bp ATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTGCTCACACTCTTGCTTGGTCATGAGTCTACCATGGTaGCATGTGACCCCTAGGTCA +
Preference number: 2 (lower is better)
Translates to: ISRCVNRRKAICSHSCLVMSLPW*HVTPRS
Trigger: TGACCTAGGGGTCACATGGCACCATGGTAGACTCAT...GACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR CCA 90 bp ATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTGCTCACACTCTTGCTTGGTCCTAATGAGTCTACCATaGTGCCATGTGACCCCTAGG +
Preference number: 2 (lower is better)
Translates to: ISRCVNRRKAICSHSCLVLMSLP*CHVTPR
Trigger: CCTAGGGGTCACATGGCACCATGGTAGACTCATTAG...GACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR TCA 90 bp GCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACAGAGAGCCTACAGAACTaGGCATTATTAAAAGGGTGT +
Preference number: 2 (lower is better)
Translates to: AKCRPVQVSLPSHRFQGTESLQN*ALLKGC
Trigger: ACACCCTTTTAATAATGCTCAGTTCTGTAGGCTCTC...TGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR TCA 90 bp ATACATCTCTGCGTCACAGTGGCACAGACCAAGGTCCCTGCCTTGACTCCCTTCATGATGCTTTCTGGATaGGGAAGAGAAGGTAAGCAG +
Preference number: 2 (lower is better)
Translates to: IHLCVTVAQTKVPALTPFMMLSG*GREGKQ
Trigger: CTGCTTACCTTCTCTTCCTCATCCAGAAAGCATCAT...GAAGGGAGTCAAGGCAGGGACCTTGGTCTGTGCCACTGTGACGCAGAGATGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR TCA 90 bp GAAGCAGGCCAGAACAGAGAATATACATTGAGGGTGAGTGTTCAGCAGGTTTTGACCCAACAGGCAGGGTaGAAAGCCTCTTACCCGTGG +
Preference number: 2 (lower is better)
Translates to: EAGQNREYTLRVSVQQVLTQQAG*KASYPW
Trigger: CCACGGGTAAGAGGCTTTTCACCCTGCCTGTTGGGT...CAAAACCTGCTGAACACTCACCCTCAATGTATATTCTCTGTTCTGGCCTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR TCA 90 bp GAATTCTGGCACTGCAGAGACAAGATGCATGGCCTACTGAAGAGGTGGATTATGTGTGGAGACTCAGGTTaGCCTTTGTGGGTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: EFWHCRDKMHGLLKRWIMCGDSG*PLWVLW
Trigger: CCAGAGGACCCACAAAGGTCAACCTGAGTCTCCACA...CATAATCCACCTCTTCAGTAGGCCATGCATCTTGTCTCTGCAGTGCCAGAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR TCA 90 bp CAATCTGCTCACACTCTTGCTTGGTCCCACATTCAAACAAACACCCAAACAAGCGATGACCAGTCTCCCTaGCTGCAGCTGGATGCCATG +
Preference number: 2 (lower is better)
Translates to: QSAHTLAWSHIQTNTQTSDDQSP*LQLDAM
Trigger: CATGGCATCCAGCTGCAGTCAGGGAGACTGGTCATC...GCTTGTTTGGGTGTTTGTTTGAATGTGGGACCAAGCAAGAGTGTGAGCAGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR GCA 90 bp ATACATCTCTGCGTCACAGTGGCACAGACCAAGGTCCCTGCCTTGACTCCCTTCACTGATCATGAAGCATaGAGGCACTATGCTTGTCCT +
Preference number: 2 (lower is better)
Translates to: IHLCVTVAQTKVPALTPFTDHEA*RHYACP
Trigger: AGGACAAGCATAGTGCCTGCATGCTTCATGATCAGT...GAAGGGAGTCAAGGCAGGGACCTTGGTCTGTGCCACTGTGACGCAGAGATGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR CCA 90 bp CTGCAGGTGACTCAGGATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTGCTCTGCCATTTGCATCTATaGAAATTGGGTCCTAAGCCA +
Preference number: 2 (lower is better)
Translates to: LQVTQDLPVCKQAEGNLLCHLHL*KLGPKP
Trigger: TGGCTTAGGACCCAATTTCCATAGATGCAAATGGCA...GAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGATCCTGAGTCACCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR CCA 90 bp AGGGCCCTGAAGGCCTTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCCCTGGTTGTACGACTTaGCCATCCTCCCTATTCCTA +
Preference number: 2 (lower is better)
Translates to: RALKALGNWHRVRVSIAVPGCTT*PSSLFL
Trigger: TAGGAATAGGGAGGATGGCCAAGTCGTACAACCAGG...GACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAAGGCCTTCAGGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR CCA 90 bp GTCCCCCTGCAGGTGACTCAGGATCTCCCGGTGTGTAAACAGGCGGAAGGCAATGTTTTACATGGTAGCTaGAAGCAAAAGAACCAGGAA +
Preference number: 2 (lower is better)
Translates to: VPLQVTQDLPVCKQAEGNVLHGS*KQKNQE
Trigger: TTCCTGGTTCTTTTGCTTCCAGCTACCATGTAAAAC...ATTGCCTTCCGCCTGTTTACACACCGGGAGATCCTGAGTCACCTGCAGGGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR CAA 90 bp TGCATCTATGGAAATTGGGTCCTAAGCCAATTAATTGCTTTTGAATaGGCTTGGGTTCCTACCAGGGCTGGTGCAGTCCCCCTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: CIYGNWVLSQLIAFE*AWVPTRAGAVPLQV
Trigger: CACCTGCAGGGGGACTGCACCAGCCCTGGTAGGAACCCAAGCCAATTCAAAAGCAATTAATTGGCTTAGGACCCAATTTCCATAGATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR TCA 90 bp GTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCCAATTAATTGCTTTTCACCATGGTCAGTGCTaGGCGCCTCTGCCCGGCACC +
Preference number: 2 (lower is better)
Translates to: VTAICIYGNWVLSQLIAFHHGQC*APLPGT
Trigger: GGTGCCGGGCAGAGGCGCTCAGCACTGACCATGGTG...AAAAGCAATTAATTGGCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR GCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGAACTGATCATGAAGCATaGAGGCACTATGCTTGTCCT +
Preference number: 2 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGTDHEA*RHYACP
Trigger: AGGACAAGCATAGTGCCTGCATGCTTCATGATCAGT...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
3UTR-3UTR GCA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGGGAGGCCCCTACCCATaGTTCCTGCACTCTCAGTGT +
Preference number: 2 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRGGPYP*FLHSQC
Trigger: ACACTGAGAGTGCAGGAAGCATGGGTAGGGGCCTCC...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR GCA 90 bp TCTGCCACTTCACATTCTACTGTAACCATGGGCCTAATGAGTCTACCATGGTGCGCAAATGTGGCCCAGTaGTTCAGCTCTGAGCCAATG +
Preference number: 2 (lower is better)
Translates to: SATSHSTVTMGLMSLPWCANVAQ*FSSEPM
Trigger: CATTGGCTCAGAGCTGAAGCACTGGGCCACATTTGC...GCACCATGGTAGACTCATTAGGCCCATGGTTACAGTAGAATGTGAAGTGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR CCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCTGCCATTTGCATCTATaGAAATTGGGTCCTAAGCCA +
Preference number: 2 (lower is better)
Translates to: SSGDTSKVQKQASGRARTCHLHL*KLGPKP
Trigger: TGGCTTAGGACCCAATTTCCATAGATGCAAATGGCA...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
3UTR CAA 90 bp TCCTCCCTATTCCTATCCACTTGCAGTACAGTGTTCAGGAAAGCTTaGCTAAACAAGGAGTTTCTACCACTCAGGAGGGGGCTGCCCTTT +
Preference number: 2 (lower is better)
Translates to: SSLFLSTCSTVFRKA*LNKEFLPLRRGLPF
Trigger: AAAGGGCAGCCCCCTCCTGAGTGGTAGAAACTCCTTGTTTAGCAAAGCTTTCCTGAACACTGTACTGCAAGTGGATAGGAATAGGGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR TCA 90 bp GCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACACTAGGGATGAGAAGATaGGAAATCTTAGAACCAATA +
Preference number: 2 (lower is better)
Translates to: AKCRPVQVSLPSHRFQGTLGMRR*EILEPI
Trigger: TATTGGTTCTAAGATTTCTCATCTTCTCATCCCTAG...TGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR TCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGAGTTCTCCCTAGAAAATaGTGCTTTCTGGATGAGGAA +
Preference number: 2 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGVLPRK*CFLDEE
Trigger: TTCCTCATCCAGAAAGCATCATTTTCTAGGGAGAAC...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR TCA 90 bp GAAGCAGGCCAGAACAGAGAATATACATTGAGGGTGAGTGTTCAGCAGGTTTTGCTCCACCTGCCAACTTaGCAGAGGTTTTCCCTGACA +
Preference number: 2 (lower is better)
Translates to: EAGQNREYTLRVSVQQVLLHLPT*QRFSLT
Trigger: TGTCAGGGAAAACCTCTGTCAAGTTGGCAGGTGGAG...CAAAACCTGCTGAACACTCACCCTCAATGTATATTCTCTGTTCTGGCCTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR TCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCATACCATGGTGCCATGTaGCCCCTAGGTCATCACTGT +
Preference number: 2 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPYHGAM*PLGHHC
Trigger: ACAGTGATGACCTAGGGGTCACATGGCACCATGGTA...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR GCA 90 bp AGGCGGAAGGCAATCTGCTCACACTCTTGCTTGGTCCCACATTCAAACAAACACCAACTCCTAGTTCAGTaGTCTTTCCACTGCAGTAGC +
Preference number: 2 (lower is better)
Translates to: RRKAICSHSCLVPHSNKHQLLVQ*SFHCSS
Trigger: GCTACTGCAGTGGAAAGAGCACTGAACTAGGAGTTG...GTGTTTGTTTGAATGTGGGACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR CAA 90 bp AACCCAGAAGCCTGGACAAGCCTTGGACAGACGACTCCAGGCATATaGAAGATGCAACTAAGAAAATTACATCAGGAGCTACCATCACCC +
Preference number: 2 (lower is better)
Translates to: NPEAWTSLGQTTPGI*KMQLRKLHQELPSP
Trigger: GGGTGATGGTAGCTCCTGATGTAATTTTCTTAGTTGCATCTTCAATATGCCTGGAGTCGTCTGTCCAAGGCTTGTCCAGGCTTCTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR CAA 90 bp ATTATACATCTCTGCGTCACAGTGGCACAGACCAAGGTCCCTGCCTaGACTCCCTTCTTGAGTAGTCCTAAAGAAGTTGATATTCTCGGC +
Preference number: 2 (lower is better)
Translates to: IIHLCVTVAQTKVPA*TPFLSSPKEVDILG
Trigger: GCCGAGAATATCAACTTCTTTAGGACTACTCAAGAAGGGAGTCAAGGCAGGGACCTTGGTCTGTGCCACTGTGACGCAGAGATGTATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR CAA 90 bp TTAGGGTACCACTATCATGGAATAGGTCCCAGGGCCCTGAAGGCCTaGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCTTTGTT +
Preference number: 2 (lower is better)
Translates to: LGYHYHGIGPRALKA*GNWHRVRVSIAVFV
Trigger: AACAAAGACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAAGGCCTTCAGGGCCCTGGGACCTATTCCATGATAGTGGTACCCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR TCA 90 bp GAAGCCTGGACAAGCCTTGGACAGACGACTCCAGGCATATTGAAGATGCAACTACCCTGGTTTCCATTTTaGCATCAGAGTCCTTTATGC +
Preference number: 2 (lower is better)
Translates to: EAWTSLGQTTPGILKMQLPWFPF*HQSPLC
Trigger: GCATAAAGGACTCTGATGTCAAAATGGAAACCAGGG...TAGTTGCATCTTCAATATGCCTGGAGTCGTCTGTCCAAGGCTTGTCCAGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR CCA 90 bp GGAGGGCAATTTAGAGATGGACCTCTTATGAGTACTGGTATTATACATCTCTGCAGCCTGGACAAGCCTTaGACAGACGACTCCAGGCAT +
Preference number: 2 (lower is better)
Translates to: GGQFRDGPLMSTGIIHLCSLDKP*TDDSRH
Trigger: ATGCCTGGAGTCGTCTGTCCAAGGCTTGTCCAGGCT...GCAGAGATGTATAATACCAGTACTCATAAGAGGTCCATCTCTAAATTGCCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR CCA 90 bp AGGGCCCTGAAGGCCTTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCAGCCACTCTAAGCCATaGCTTAAGCAATCTGCTAAA +
Preference number: 2 (lower is better)
Translates to: RALKALGNWHRVRVSIAVSHSKP*LKQSAK
Trigger: TTTAGCAGATTGCTTAAGCCATGGCTTAGAGTGGCT...GACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAAGGCCTTCAGGGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR TCA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACTCCAGAGAGTTCAGGTaGCACATCCAAGGTCCAAAA +
Preference number: 2 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNSREFR*HIQGPK
Trigger: TTTTGGACCTTGGATGTGTCACCTGAACTCTCTGGA...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
3UTR-3UTR GCA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACCAACTCCTAGTTCAGTaGTCTTTCCACTGCAGTAGC +
Preference number: 2 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNQLLVQ*SFHCSS
Trigger: GCTACTGCAGTGGAAAGAGCACTGAACTAGGAGTTG...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
3UTR-3UTR GCA 90 bp GAAGCAGGCCAGAACAGAGAATATACATTGAGGGTGAGTGTTCAGCAGGTTTTGTGTGAATTCTGGCACTaGAGAGACAAGATGCATGGC +
Preference number: 2 (lower is better)
Translates to: EAGQNREYTLRVSVQQVLCEFWH*RDKMHG
Trigger: GCCATGCATCTTGTCTCTGCAGTGCCAGAATTCACA...CAAAACCTGCTGAACACTCACCCTCAATGTATATTCTCTGTTCTGGCCTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR CCA 90 bp TCTGCCACTTCACATTCTACTGTAACCATGGGCCTAATGAGTCTACCATGGTGCTCAGAGAATGAGGCCTaGTTTTACATGGTAGCTGGA +
Preference number: 2 (lower is better)
Translates to: SATSHSTVTMGLMSLPWCSENEA*FYMVAG
Trigger: TCCAGCTACCATGTAAAACCAGGCCTCATTCTCTGA...GCACCATGGTAGACTCATTAGGCCCATGGTTACAGTAGAATGTGAAGTGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR TCA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGTTACAGATGGAAACCTaGGGTCCAGAGAGTTCAGGT +
Preference number: 2 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRLQMET*GPESSG
Trigger: ACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAA...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR TCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTTACAGATGGAAACCTaGGGTCCAGAGAGTTCAGGT +
Preference number: 2 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLLQMET*GPESSG
Trigger: ACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAA...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
3UTR-3UTR TCA 90 bp AGATCTGGGGGTCTAGAGATCTTCCTAATGGTGAAGATCTTCTCACAGGTAAAGAACCTCACACTCGGATaGGGGGTAAGTCATGTGAAA +
Preference number: 2 (lower is better)
Translates to: RSGGLEIFLMVKIFSQVKNLTLG*GVSHVK
Trigger: TTTCACATGACTTACCCCTCATCCGAGTGTGAGGTT...CTTTACCTGTGAGAAGATCTTCACCATTAGGAAGATCTCTAGACCCCCAGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR GCA 90 bp AGGCAGGGGGAAGAAGTAAGAGGAGGGCAATTTAGAGATGGACCTCTTATGAGTCTGGAAGGTCCTACATaGCAGGCTAAATGTAAACAT +
Preference number: 2 (lower is better)
Translates to: RQGEEVRGGQFRDGPLMSLEGPT*QAKCKH
Trigger: ATGTTTACATTTAGCCTGGCATGTAGGACCTTCCAG...ACTCATAAGAGGTCCATCTCTAAATTGCCCTCCTCTTACTTCTTCCCCCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR TCA 90 bp TTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCTTTGTTGGTCATCTGTCCAGAGAGTTCAGGTaGCACATCCAAGGTCCAAAA +
Preference number: 2 (lower is better)
Translates to: LGNWHRVRVSIAVFVGHLSREFR*HIQGPK
Trigger: TTTTGGACCTTGGATGTGTCACCTGAACTCTCTGGA...CAGATGACCAACAAAGACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR TCA 90 bp TGTAGTCCTCTCTACATGCCTGTAGATTATAGGCCACCCTTCTGCTTTCCTCTTTTAAAGTTGCAGTGTTaGGTTAGGACCTTCTCCACA +
Preference number: 2 (lower is better)
Translates to: CSPLYMPVDYRPPFCFPLLKLQC*VRTFST
Trigger: TGTGGAGAAGGTCCTAACTCAACACTGCAACTTTAA...AAGAGGAAAGCAGAAGGGTGGCCTATAATCTACAGGCATGTAGAGAGGACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR TCA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGGTAAAAAGGACACAGTaGGGAGTCAGTCAAGGAGTT +
Preference number: 2 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRVKRTQ*GVSQGV
Trigger: AACTCCTTGACTGACTCCTCACTGTGTCCTTTTTAC...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR TCA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGATGGAGAACCACAAATaGTTTAGAGCCAAGGAATGG +
Preference number: 2 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRMENHK*FRAKEW
Trigger: CCATTCCTTGGCTCTAAATCATTTGTGGTTCTCCAT...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR GCA 90 bp TCTGTTAACCTGTCTGTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCATCTGCTCACACTCTTaGTTGGTCCCACATTCAAAC +
Preference number: 2 (lower is better)
Translates to: SVNLSVTAICIYGNWVLSICSHS*LVPHSN
Trigger: GTTTGAATGTGGGACCAAGCAAGAGTGTGAGCAGAT...GCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTTAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR CAA 90 bp AGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATaGAGGGTGAGTGTTCAGCAGGTTTTGAATGCTACACAATCTACA +
Preference number: 2 (lower is better)
Translates to: SSVTDLEAGQNREYT*RVSVQQVLNATQST
Trigger: TGTAGATTGTGTAGCATTCAAAACCTGCTGAACACTCACCCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR TCA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACCTAGGGATGAGAAGATaGGAAATCTTAGAACCAATA +
Preference number: 2 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNLGMRR*EILEPI
Trigger: TATTGGTTCTAAGATTTCTCATCTTCTCATCCCTAG...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
3UTR-3UTR TCA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGTTTTCTTACTATTCCTaGGATAAGAACACAGGCCTG +
Preference number: 2 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRFSYYS*DKNTGL
Trigger: CAGGCCTGTGTTCTTATCTCAGGAATAGTAAGAAAA...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR CCA 90 bp TCTGTTAACCTGTCTGTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCTGCCATTTGCATCTATaGAAATTGGGTCCTAAGCCA +
Preference number: 2 (lower is better)
Translates to: SVNLSVTAICIYGNWVLSCHLHL*KLGPKP
Trigger: TGGCTTAGGACCCAATTTCCATAGATGCAAATGGCA...GCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTTAACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
3UTR CAA 90 bp AGCAATACGCACTATTATCCAGTACTACTGGCATTGAGATTCTCATaGTTCTCCCTAGAAAATGATGCTTTCTGGATGAGGAAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: SNTHYYPVLLALRFS*FSLENDAFWMRKRR
Trigger: CCTTCTCTTCCTCATCCAGAAAGCATCATTTTCTAGGGAGAACAATGAGAATCTCAATGCCAGTAGTACTGGATAATAGTGCGTATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR CAA 90 bp AATGCCACCAGAAGCAATACGCACTATTATCCAGTACTACTGGCATaGAGATTCTCATTGTTCTCCCTAGAAAATGATGCTTTCTGGATG +
Preference number: 2 (lower is better)
Translates to: NATRSNTHYYPVLLA*RFSLFSLENDAFWM
Trigger: CATCCAGAAAGCATCATTTTCTAGGGAGAACAATGAGAATCTCAATGCCAGTAGTACTGGATAATAGTGCGTATTGCTTCTGGTGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR TCA 90 bp AGCATTTTTGTCAAAGCCATTCAACAAGTCTCTAGGGAGTTCCAAACTTTTCCATTTTCTCTCTTCTTCTaGGCCCTCCAAACTGTTCCA +
Preference number: 2 (lower is better)
Translates to: SIFVKAIQQVSREFQTFPFSLFF*ALQTVP
Trigger: TGGAACAGTTTGGAGGGCTCAGAAGAAGAGAGAAAA...TGGAAAAGTTTGGAACTCCCTAGAGACTTGTTGAATGGCTTTGACAAAAATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529024.1
3UTR-3UTR GCA 90 bp CCATTCAACAAGTCTCTAGGGAGTTCCAAACTTTTCCACATTTTTCTCTCTTCTAACTGTTCCAACTTCTaGCTGTTACCAAGTTCCAAA +
Preference number: 2 (lower is better)
Translates to: PFNKSLGSSKLFHIFLSSNCSNF*LLPSSK
Trigger: TTTGGAACTTGGTAACAGGCAGAAGTTGGAACAGTT...AGAAGAGAGAAAAATGTGGAAAAGTTTGGAACTCCCTAGAGACTTGTTGAATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529024.1
3UTR GCA 72 bp GCGCCTCTGCCCGGCACCTGTTTGGTGTCCGGGCACTaGAATATAGCACAGGGTGGCCAGCCCTCCCAGTCA +
Preference number: 3 (lower is better)
Translates to: APLPGTCLVSGH*NIAQGGQPSQS
Trigger: TGACTGGGAGGGCTGGCCACCCTGTGCTATATTGCAGTGCCCGGACACCAAACAGGTGCCGGGCAGAGGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR TCA 72 bp GGGTTCCTACCAGGGCTGGTGCAGTCCCCCTGCAGGTaGCTCAGGATCTCCCGGTGTGTAAACAGGCGGAAG +
Preference number: 3 (lower is better)
Translates to: GFLPGLVQSPCR*LRISRCVNRRK
Trigger: CTTCCGCCTGTTTACACACCGGGAGATCCTGAGTCACCTGCAGGGGGACTGCACCAGCCCTGGTAGGAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR TCA 72 bp GGGGGCTCACAGAGCTGTCGACTCAGGGCCAGTCTCTaGAAGCCTTCACCATGGTCAGTGCTGAGCGCCTCT +
Preference number: 3 (lower is better)
Translates to: GGSQSCRLRASL*KPSPWSVLSAS
Trigger: AGAGGCGCTCAGCACTGACCATGGTGAAGGCTTTCAGAGACTGGCCCTGAGTCGACAGCTCTGTGAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR CCA 72 bp GGGATCTCCAGGGGCCGGAAACTTACCACACTCCCTTaGCAACCATGTGGGGGCTCACAGAGCTGTCGACTC +
Preference number: 3 (lower is better)
Translates to: GISRGRKLTTLP*QPCGGSQSCRL
Trigger: GAGTCGACAGCTCTGTGAGCCCCCACATGGTTGCCAAGGGAGTGTGGTAAGTTTCCGGCCCCTGGAGATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR GCA 72 bp CTGAAAGCCTTCACCATGGTCAGTGCTGAGCGCCTCTaGCCGGCACCTGTTTGGTGTCCGGGCACTGCAATA +
Preference number: 3 (lower is better)
Translates to: LKAFTMVSAERL*PAPVWCPGTAI
Trigger: TATTGCAGTGCCCGGACACCAAACAGGTGCCGGGCAGAGGCGCTCAGCACTGACCATGGTGAAGGCTTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR TCA 72 bp GATGTAGTAGGTATACGCAGGGATGACCAGTCTCCCTaGCTGCAGCTGGATGCCATGACCTGGGCCCACAGC +
Preference number: 3 (lower is better)
Translates to: DVVGIRRDDQSP*LQLDAMTWAHS
Trigger: GCTGTGGGCCCAGGTCATGGCATCCAGCTGCAGTCAGGGAGACTGGTCATCCCTGCGTATACCTACTACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR TCA 72 bp GGCGGGACCAGCAGGCAGCCTCCAAGGGGGTCTGGTTaGGATAGATACCTAGGTCAACCCTCTGTTTCCTAC +
Preference number: 3 (lower is better)
Translates to: GGTSRQPPRGSG*DRYLGQPSVSY
Trigger: GTAGGAAACAGAGGGTTGACCTAGGTATCTATCTCAACCAGACCCCCTTGGAGGCTGCCTGCTGGTCCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR GCA 72 bp ACATACCAGCAGCAGGAGGCCCCTACCCATGCTTCCTaGACTCTCAGTGTTGGGCCATGTGTGCTGGAAGGA +
Preference number: 3 (lower is better)
Translates to: TYQQQEAPTHAS*TLSVGPCVLEG
Trigger: TCCTTCCAGCACACATGGCCCAACACTGAGAGTGCAGGAAGCATGGGTAGGGGCCTCCTGCTGCTGGTATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR CCA 72 bp GGGTGCATCTTTGCTGCTAGAGTCCTGGCACCTATGTaGGATCTCCAGGGGCCGGAAACTTACCACACTCCC +
Preference number: 3 (lower is better)
Translates to: GCIFAARVLAPM*DLQGPETYHTP
Trigger: GGGAGTGTGGTAAGTTTCCGGCCCCTGGAGATCCCACATAGGTGCCAGGACTCTAGCAGCAAAGATGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR TCA 72 bp GCCTCTTACCCGTGGCTGAAGCTGCTTGATGTCCTGTaGATATCGGAGGGGAGACTGGTGACCAGGGGAAAC +
Preference number: 3 (lower is better)
Translates to: ASYPWLKLLDVL*ISEGRLVTRGN
Trigger: GTTTCCCCTGGTCACCAGTCTCCCCTCCGATATTCACAGGACATCAAGCAGCTTCAGCCACGGGTAAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR TCA 72 bp CCTTTGTGGGTCCTCTGGGCTACCCAACAGGCAGGGTaGAAAGCCTCTTACCCGTGGCTGAAGCTGCTTGAT +
Preference number: 3 (lower is better)
Translates to: PLWVLWATQQAG*KASYPWLKLLD
Trigger: ATCAAGCAGCTTCAGCCACGGGTAAGAGGCTTTTCACCCTGCCTGTTGGGTAGCCCAGAGGACCCACAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR CAA 90 bp GTCCCCCTGCAGGTGACTCAGGATCTCCCGGTGTGTAAACAGGCGGAAGGCAATTCTGTTTCCTACTGGTaGGGTGTGAGTACAAGAGCC +
Preference number: 3 (lower is better)
Translates to: VPLQVTQDLPVCKQAEGNSVSYW*GVSTRA
Trigger: GGCTCTTGTACTCACACCCAACCAGTAGGAAACAGA...ATTGCCTTCCGCCTGTTTACACACCGGGAGATCCTGAGTCACCTGCAGGGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR TCA 72 bp CCCAACAGGCAGGGTGAAAAGCCTCTTACCCGTGGCTaGAGCTGCTTGATGTCCTGTGAATATCGGAGGGGA +
Preference number: 3 (lower is better)
Translates to: PNRQGEKPLTRG*SCLMSCEYRRG
Trigger: TCCCCTCCGATATTCACAGGACATCAAGCAGCTTCAGCCACGGGTAAGAGGCTTTTCACCCTGCCTGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR GCA 72 bp TGCAGTGTTGAGTTAGGACCTTCTCCACAAGCTAAGTaGCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGG +
Preference number: 3 (lower is better)
Translates to: CSVELGPSPQAK*RPVQVSLPSHR
Trigger: CCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGCTTGTGGAGAAGGTCCTAACTCAACACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR GCA 72 bp GGACCAAAGGGAGGCCCAGACTGTGAATTCTGGCACTaGAGAGACAAGATGCATGGCCTACTGAAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: GPKGGPDCEFWH*RDKMHGLLKRW
Trigger: CCACCTCTTCAGTAGGCCATGCATCTTGTCTCTGCAGTGCCAGAATTCACAGTCTGGGCCTCCCTTTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR TCA 72 bp ATCCATTCTGAGTCCAAGGGACAGGAAGGGGGCTCCTaGGGGCAAAGAACAGAGGCCTATGTAGTCCTCTCT +
Preference number: 3 (lower is better)
Translates to: IHSESKGQEGGS*GQRTEAYVVLS
Trigger: AGAGAGGACTACATAGGCCTCTGTTCTTTGCCCTCAGGAGCCCCCTTCCTGTCCCTTGGACTCAGAATGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR TCA 72 bp AGGGTGAAAAGCCTCTTACCCGTGGCTGAAGCTGCTTaGTGTCCTGTGAATATCGGAGGGGAGACTGGTGAC +
Preference number: 3 (lower is better)
Translates to: RVKSLLPVAEAA*CPVNIGGETGD
Trigger: GTCACCAGTCTCCCCTCCGATATTCACAGGACATCAAGCAGCTTCAGCCACGGGTAAGAGGCTTTTCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR CAA 90 bp TTGGTGTCCGGGCACTGCAATATAGCACAGGGTGGCCAGCCCTCCCAGTCACCTGTCTGTAACTGCCATTaGCATCTATGGAAATTGGGT +
Preference number: 3 (lower is better)
Translates to: LVSGHCNIAQGGQPSQSPVCNCH*HLWKLG
Trigger: ACCCAATTTCCATAGATGCAAATGGCAGTTACAGAC...AGGTGACTGGGAGGGCTGGCCACCCTGTGCTATATTGCAGTGCCCGGACACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR CCA 72 bp TGGGTCCTAAGCCAATTAATTGCTTTTGAATTGGCTTaGGTTCCTACCAGGGCTGGTGCAGTCCCCCTGCAG +
Preference number: 3 (lower is better)
Translates to: WVLSQLIAFELA*VPTRAGAVPLQ
Trigger: CTGCAGGGGGACTGCACCAGCCCTGGTAGGAACCCAAGCCAATTCAAAAGCAATTAATTGGCTTAGGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR CAA 90 bp TCTGTTAACCTGTCTGTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCCTGCCCGGCACCTGTTaGGTGTCCGGGCACTGCAAT +
Preference number: 3 (lower is better)
Translates to: SVNLSVTAICIYGNWVLSLPGTC*VSGHCN
Trigger: ATTGCAGTGCCCGGACACCAAACAGGTGCCGGGCAG...GCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTTAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR CAA 90 bp TGTAGTCCTCTCTACATGCCTGTAGATTATAGGCCACCCTTCTGCTTTCCTCTTCCTCCACCTGCCAACTaGACAGAGGTTTTCCCTGAC +
Preference number: 3 (lower is better)
Translates to: CSPLYMPVDYRPPFCFPLPPPAN*TEVFPD
Trigger: GTCAGGGAAAACCTCTGTCAAGTTGGCAGGTGGAGG...AAGAGGAAAGCAGAAGGGTGGCCTATAATCTACAGGCATGTAGAGAGGACTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR CAA 90 bp GCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACAGTGTTCAGGAAAGCTTaGCTAAACAAGGAGTTTCTA +
Preference number: 3 (lower is better)
Translates to: AKCRPVQVSLPSHRFQGTVFRKA*LNKEFL
Trigger: TAGAAACTCCTTGTTTAGCAAAGCTTTCCTGAACAC...TGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR TCA 72 bp TGCTTGATGTCCTGTGAATATCGGAGGGGAGACTGGTaGCCAGGGGAAACAAGTCAAATTAAGCACCCAGAC +
Preference number: 3 (lower is better)
Translates to: CLMSCEYRRGDW*PGETSQIKHPD
Trigger: GTCTGGGTGCTTAATTTGACTTGTTTCCCCTGGTCACCAGTCTCCCCTCCGATATTCACAGGACATCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR GCA 72 bp AGGATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTaGTCACACTCTTGCTTGGTCCCACATTCAAACAAA +
Preference number: 3 (lower is better)
Translates to: RISRCVNRRKAI*SHSCLVPHSNK
Trigger: TTTGTTTGAATGTGGGACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR-3UTR CAA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGAGGGCCCTGAAGGCCTaGGGTAATTGGCACAGAGTT +
Preference number: 3 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRRALKA*GNWHRV
Trigger: AACTCTGTGCCAATTACCCAAGGCCTTCAGGGCCCT...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR GCA 72 bp CAGCAGGTTTTGAATGCTACACAATCTACAAAGGGATaGAACATCCTTCTCCCTACAGCGGAACTCCCCCTA +
Preference number: 3 (lower is better)
Translates to: QQVLNATQSTKG*NILLPTAELPL
Trigger: TAGGGGGAGTTCCGCTGTAGGGAGAAGGATGTTGCATCCCTTTGTAGATTGTGTAGCATTCAAAACCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR CAA 90 bp ATACATCTCTGCGTCACAGTGGCACAGACCAAGGTCCCTGCCTTGACTCCCTTCCATGATTCTTCTGTTTaGCTCAATTCCTCTAGGATA +
Preference number: 3 (lower is better)
Translates to: IHLCVTVAQTKVPALTPFHDSSV*LNSSRI
Trigger: TATCCTAGAGGAATTGAGCAAAACAGAAGAATCATG...GAAGGGAGTCAAGGCAGGGACCTTGGTCTGTGCCACTGTGACGCAGAGATGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR CAA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGGTAGTCCTAAAGAAGTaGATATTCTCGGCTGGGCGC +
Preference number: 3 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRVVLKK*IFSAGR
Trigger: GCGCCCAGCCGAGAATATCAACTTCTTTAGGACTAC...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR CAA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGATTGCATCTATGGAAATaGGGTCCTAAGCCAATTAAT +
Preference number: 3 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGLHLWK*GPKPIN
Trigger: ATTAATTGGCTTAGGACCCAATTTCCATAGATGCAA...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR GCA 72 bp TCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATaGAGGCACTATGCTTGTCCTAGGGATGAGAAGATG +
Preference number: 3 (lower is better)
Translates to: SFMQPGLTDHEA*RHYACPRDEKM
Trigger: CATCTTCTCATCCCTAGGACAAGCATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
3UTR GCA 72 bp TGTGTAAACAGGCGGAAGGCAATCTGCTCACACTCTTaGTTGGTCCCACATTCAAACAAACACCCAAACAAG +
Preference number: 3 (lower is better)
Translates to: CVNRRKAICSHS*LVPHSNKHPNK
Trigger: CTTGTTTGGGTGTTTGTTTGAATGTGGGACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCTGTTTACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR CCA 72 bp CCATGGGCCTACACAAATAGGCCTGATTCTGAGATCTaGGGGTCTAGAGATCTTCCTAATGGTGAAGATCTT +
Preference number: 3 (lower is better)
Translates to: PWAYTNRPDSEI*GSRDLPNGEDL
Trigger: AAGATCTTCACCATTAGGAAGATCTCTAGACCCCCAGATCTCAGAATCAGGCCTATTTGTGTAGGCCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR CAA 90 bp AGGCAGGGGGAAGAAGTAAGAGGAGGGCAATTTAGAGATGGACCTCTTATGAGTGTCTGTAACTGCCATTaGCATCTATGGAAATTGGGT +
Preference number: 3 (lower is better)
Translates to: RQGEEVRGGQFRDGPLMSVCNCH*HLWKLG
Trigger: ACCCAATTTCCATAGATGCAAATGGCAGTTACAGAC...ACTCATAAGAGGTCCATCTCTAAATTGCCCTCCTCTTACTTCTTCCCCCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR CAA 90 bp GAAGCAGGCCAGAACAGAGAATATACATTGAGGGTGAGTGTTCAGCAGGTTTTGATTGGGAAGATTACCTaGGCAAATGTAGGAGAGGCT +
Preference number: 3 (lower is better)
Translates to: EAGQNREYTLRVSVQQVLIGKIT*ANVGEA
Trigger: AGCCTCTCCTACATTTGCCAAGGTAATCTTCCCAAT...CAAAACCTGCTGAACACTCACCCTCAATGTATATTCTCTGTTCTGGCCTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR CAA 90 bp GTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCCAATTAATTGCTTTTACTTACCACACTCCCTaGGCAACCATGTGGGGGCTC +
Preference number: 3 (lower is better)
Translates to: VTAICIYGNWVLSQLIAFTYHTP*ATMWGL
Trigger: GAGCCCCCACATGGTTGCCAAGGGAGTGTGGTAAGT...AAAAGCAATTAATTGGCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR GCA 72 bp TGTACGACTTGGCCATCCTCCCTATTCCTATCCACTTaGAGTACAGTGTTCAGGAAAGCTTTGCTAAACAAG +
Preference number: 3 (lower is better)
Translates to: CTTWPSSLFLST*STVFRKALLNK
Trigger: CTTGTTTAGCAAAGCTTTCCTGAACACTGTACTGCAAGTGGATAGGAATAGGGAGGATGGCCAAGTCGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR CCA 72 bp TCATTCTTTTCATCCTTTAGCCCTGGTTGTACGACTTaGCCATCCTCCCTATTCCTATCCACTTGCAGTACA +
Preference number: 3 (lower is better)
Translates to: SFFSSFSPGCTT*PSSLFLSTCST
Trigger: TGTACTGCAAGTGGATAGGAATAGGGAGGATGGCCAAGTCGTACAACCAGGGCTAAAGGATGAAAAGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR CAA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCAGTCTGTAACTGCCATTaGCATCTATGGAAATTGGGT +
Preference number: 3 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPVCNCH*HLWKLG
Trigger: ACCCAATTTCCATAGATGCAAATGGCAGTTACAGAC...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
3UTR-3UTR CAA 90 bp AGATCTGGGGGTCTAGAGATCTTCCTAATGGTGAAGATCTTCTCACAGGTAAAGCCAGTACTACTGGCATaGAGATTCTCATTGTTCTCC +
Preference number: 3 (lower is better)
Translates to: RSGGLEIFLMVKIFSQVKPVLLA*RFSLFS
Trigger: GGAGAACAATGAGAATCTCAATGCCAGTAGTACTGG...CTTTACCTGTGAGAAGATCTTCACCATTAGGAAGATCTCTAGACCCCCAGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR CCA 72 bp ACACAGTCAGAACACATCAAGCCTCAGAATCTCCCTTaGAGGCCTGGAAAACTAGTAACTATAGAAAACCCA +
Preference number: 3 (lower is better)
Translates to: TQSEHIKPQNLP*RPGKLVTIENP
Trigger: TGGGTTTTCTATAGTTACTAGTTTTCCAGGCCTCCAAGGGAGATTCTGAGGCTTGATGTGTTCTGACTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR-3UTR CAA 90 bp GAATTCTGGCACTGCAGAGACAAGATGCATGGCCTACTGAAGAGGTGGATTATGGCATTGAGATTCTCATaGTTCTCCCTAGAAAATGAT +
Preference number: 3 (lower is better)
Translates to: EFWHCRDKMHGLLKRWIMALRFS*FSLEND
Trigger: ATCATTTTCTAGGGAGAACAATGAGAATCTCAATGC...CATAATCCACCTCTTCAGTAGGCCATGCATCTTGTCTCTGCAGTGCCAGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR GCA 72 bp TCTCTTCTTCTGAGCCCTCCAAACTGTTCCAACTTCTaGCTGTTACCAAGTTCCAAAGTAGTTTCCACATTT +
Preference number: 3 (lower is better)
Translates to: SLLLSPPNCSNF*LLPSSKVVSTF
Trigger: AAATGTGGAAACTACTTTGGAACTTGGTAACAGGCAGAAGTTGGAACAGTTTGGAGGGCTCAGAAGAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529024.1
3UTR TCA 72 bp GAACAACCAACGTGGTATCATCTGAGAGACTCAGCATaGACTAAGTTCAGCACGAAAACCATTAGACAAAAA +
Preference number: 3 (lower is better)
Translates to: EQPTWYHLRDSA*TKFSTKTIRQK
Trigger: TTTTTGTCTAATGGTTTTCGTGCTGAACTTAGTTCATGCTGAGTCTCTCAGATGATACCACGTTGGTTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR CCA 72 bp AAGAACGATGGTAGTTTTTATAGTACAGAGTATTTCTaGCACTCAGCATCACAAAGCCAAGACACAGTCAGA +
Preference number: 3 (lower is better)
Translates to: KNDGSFYSTEYF*HSASQSQDTVR
Trigger: TCTGACTGTGTCTTGGCTTTGTGATGCTGAGTGCCAGAAATACTCTGTACTATAAAAACTACCATCGTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR GCA 72 bp TCAGTAGCTTCTGTTAACCTGTCTGTAACTGCCATTTaGATCTATGGAAATTGGGTCCTAAGCCAATTAATT +
Preference number: 3 (lower is better)
Translates to: SVASVNLSVTAI*IYGNWVLSQLI
Trigger: AATTAATTGGCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTTAACAGAAGCTACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR CCA 72 bp AACCTGTCTGTAACTGCCATTTGCATCTATGGAAATTaGGTCCTAAGCCAATTAATTGCTTTTGAATTGGCT +
Preference number: 3 (lower is better)
Translates to: NLSVTAICIYGN*VLSQLIAFELA
Trigger: AGCCAATTCAAAAGCAATTAATTGGCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR TCA 90 bp CACCTGTTTGGTGTCCGGGCACTGCAATATAGCACAGGGTGGCCAGCCCTCCCACACCATGGTCAGTGCTaGGCGCCTCTGCCCGGCACC +
Preference number: 4 (lower is better)
Translates to: HLFGVRALQYSTGWPALPHHGQC*APLPGT
Trigger: GGTGCCGGGCAGAGGCGCTCAGCACTGACCATGGTG...TGGGAGGGCTGGCCACCCTGTGCTATATTGCAGTGCCCGGACACCAAACAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR TCA 90 bp AAGCCTTCACCATGGTCAGTGCTGAGCGCCTCTGCCCGGCACCTGTTTGGTGTCCAGTCCCCCTGCAGGTaGCTCAGGATCTCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: KPSPWSVLSASARHLFGVQSPCR*LRISRC
Trigger: ACACCGGGAGATCCTGAGTCACCTGCAGGGGGACTG...GACACCAAACAGGTGCCGGGCAGAGGCGCTCAGCACTGACCATGGTGAAGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR CCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCGGGCCCCCACTGCACTaGACCCCGGCTCCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: SSGDTSKVQKQASGRARTGPPLH*TPAPPS
Trigger: AGACGGAGGAGCCGGGGTCCAGTGCAGTGGGGGCCC...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532963.1
3UTR CAA 72 bp CCTACTGCCCTGGGGAGGAGGCTGTGGAGACTCAGGTaGACCTTTGTGGGTCCTCTGGGCTACCCAACAGGC +
Preference number: 4 (lower is better)
Translates to: PTALGRRLWRLR*TFVGPLGYPTG
Trigger: GCCTGTTGGGTAGCCCAGAGGACCCACAAAGGTCAACCTGAGTCTCCACAGCCTCCTCCCCAGGGCAGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp CACCTGTTTGGTGTCCGGGCACTGCAATATAGCACAGGGTGGCCAGCCCTCCCAGGGTTCATGGTCCGATaGCCCGGTAGTGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: HLFGVRALQYSTGWPALPGFMVR*PGSVAS
Trigger: GGAAGCCACACTACCGGGGCATCGGACCATGAACCC...TGGGAGGGCTGGCCACCCTGTGCTATATTGCAGTGCCCGGACACCAAACAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR GCA 90 bp TTGGTGTCCGGGCACTGCAATATAGCACAGGGTGGCCAGCCCTCCCAGTCACCTAGTGCTGAGCGCCTCTaGCCGGCACCTGTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LVSGHCNIAQGGQPSQSPSAERL*PAPVWC
Trigger: ACACCAAACAGGTGCCGGGCAGAGGCGCTCAGCACT...AGGTGACTGGGAGGGCTGGCCACCCTGTGCTATATTGCAGTGCCCGGACACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR CCA 90 bp CACCTGTTTGGTGTCCGGGCACTGCAATATAGCACAGGGTGGCCAGCCCTCCCACCCTTGGCAACCATGTaGGGGCTCACAGAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: HLFGVRALQYSTGWPALPPLATM*GLTELS
Trigger: CGACAGCTCTGTGAGCCCCCACATGGTTGCCAAGGG...TGGGAGGGCTGGCCACCCTGTGCTATATTGCAGTGCCCGGACACCAAACAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR TCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACACCATGGTCAGTGCTaGGCGCCTCTGCCCGGCACC +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGHHGQC*APLPGT
Trigger: GGTGCCGGGCAGAGGCGCTCAGCACTGACCATGGTG...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CCA 90 bp GCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACACTGTCGGGGCAGAGCTaGACGCCGGGGATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: AKCRPVQVSLPSHRFQGTLSGQS*TPGILP
Trigger: TGGAAGAATCCCCGGCGTCCAGCTCTGCCCCGACAG...TGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp GCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACAGGCAGGAGGCTGGCCTaGGTACATACCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AKCRPVQVSLPSHRFQGTGRRLA*VHTSSR
Trigger: CCTGCTGCTGGTATGTACCCAGGCCAGCCTCCTGCC...TGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp GTCCTGGCACCTATGTGGGATCTCCAGGGGCCGGAAACTTACCACACTCCCTTGTCTGTTGACGCTCTGTaGCATGGCCCCGCACACAGA +
Preference number: 4 (lower is better)
Translates to: VLAPMWDLQGPETYHTPLSVDAL*HGPAHR
Trigger: TCTGTGTGCGGGGCCATGTCACAGAGCGTCAACAGA...CAAGGGAGTGTGGTAAGTTTCCGGCCCCTGGAGATCCCACATAGGTGCCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR TCA 90 bp GGATCTCCAGGGGCCGGAAACTTACCACACTCCCTTGGCAACCATGTGGGGGCTTCAGCTCTGAGCCAATaGCCTCCTCAGTCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: GSPGAGNLPHSLGNHVGASALSQ*PPQSSP
Trigger: GGGACTTGACTGAGGAGGTCATTGGCTCAGAGCTGA...AGCCCCCACATGGTTGCCAAGGGAGTGTGGTAAGTTTCCGGCCCCTGGAGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR TCA 90 bp AAGCCTTCACCATGGTCAGTGCTGAGCGCCTCTGCCCGGCACCTGTTTGGTGTCCTCAGGGCCAGTCTCTaGAAGCCTTCACCATGGTCA +
Preference number: 4 (lower is better)
Translates to: KPSPWSVLSASARHLFGVLRASL*KPSPWS
Trigger: TGACCATGGTGAAGGCTTTCAGAGACTGGCCCTGAG...GACACCAAACAGGTGCCGGGCAGAGGCGCTCAGCACTGACCATGGTGAAGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR CCA 90 bp ACATTCTACTGTAACCATGGGCCTAATGAGTCTACCATGGTGCCATGTGACCCCCCGGGGATTCTTCCATaGGGCGCGGGGGCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: TFYCNHGPNESTMVPCDPPGILP*GAGAGP
Trigger: CGGACCTGCCCCCGCGCCCCATGGAAGAATCCCCGG...GGGGTCACATGGCACCATGGTAGACTCATTAGGCCCATGGTTACAGTAGAATGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR CCA 90 bp CTGCAGGTGACTCAGGATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTGCTCTGTGGCTTCCATCAGTaGCTTCAGGGGCCCCCACTG +
Preference number: 4 (lower is better)
Translates to: LQVTQDLPVCKQAEGNLLCGFHQ*LQGPPL
Trigger: CAGTGGGGGCCCCTGAAGCCACTGATGGAAGCCACA...GAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGATCCTGAGTCACCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR CCA 90 bp AAGCCTTCACCATGGTCAGTGCTGAGCGCCTCTGCCCGGCACCTGTTTGGTGTCGATGCCCCGGTAGTGTaGCTTCCATCAGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: KPSPWSVLSASARHLFGVDAPVV*LPSVAS
Trigger: TGAAGCCACTGATGGAAGCCACACTACCGGGGCATC...GACACCAAACAGGTGCCGGGCAGAGGCGCTCAGCACTGACCATGGTGAAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR CCA 90 bp TTGGTGTCCGGGCACTGCAATATAGCACAGGGTGGCCAGCCCTCCCAGTCACCTCTTACCACACTCCCTTaGCAACCATGTGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LVSGHCNIAQGGQPSQSPLTTLP*QPCGGS
Trigger: TGAGCCCCCACATGGTTGCCAAGGGAGTGTGGTAAG...AGGTGACTGGGAGGGCTGGCCACCCTGTGCTATATTGCAGTGCCCGGACACCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR TCA 90 bp GCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACAGATGACCAGTCTCCCTaGCTGCAGCTGGATGCCATG +
Preference number: 4 (lower is better)
Translates to: AKCRPVQVSLPSHRFQGTDDQSP*LQLDAM
Trigger: CATGGCATCCAGCTGCAGTCAGGGAGACTGGTCATC...TGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp CTGCAGGTGACTCAGGATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTGCTCGATGACCAGTCTCCCTaGCTGCAGCTGGATGCCATG +
Preference number: 4 (lower is better)
Translates to: LQVTQDLPVCKQAEGNLLDDQSP*LQLDAM
Trigger: CATGGCATCCAGCTGCAGTCAGGGAGACTGGTCATC...GAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGATCCTGAGTCACCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR TCA 90 bp TCGACTCAGGGCCAGTCTCTGAAAGCCTTCACCATGGTCAGTGCTGAGCGCCTCAGGTATACGCAGGGATaGCCAGTCTCCCTGACTGCA +
Preference number: 4 (lower is better)
Translates to: STQGQSLKAFTMVSAERLRYTQG*PVSLTA
Trigger: TGCAGTCAGGGAGACTGGTCATCCCTGCGTATACCT...GAGGCGCTCAGCACTGACCATGGTGAAGGCTTTCAGAGACTGGCCCTGAGTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR TCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACAGTCCCCCTGCAGGTaGCTCAGGATCTCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGQSPCR*LRISRC
Trigger: ACACCGGGAGATCCTGAGTCACCTGCAGGGGGACTG...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR TCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCGGACAGCCTGAGAGTTaGGCAAAGGTTCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SSGDTSKVQKQASGRARTGQPES*AKVPGL
Trigger: GAGGCCGGGAACCTTTGCTCAACTCTCAGGCTGTCC...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531509.5
CDS-3UTR GCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCGGGTTCATGGTCCGATaGCCCGGTAGTGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SSGDTSKVQKQASGRARTGFMVR*PGSVAS
Trigger: GGAAGCCACACTACCGGGGCATCGGACCATGAACCC...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR GCA 90 bp GTCCTGGCACCTATGTGGGATCTCCAGGGGCCGGAAACTTACCACACTCCCTTGGGCGGGCAGCATTCCTaGCTGACACAATCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: VLAPMWDLQGPETYHTPLGGQHS*LTQSVD
Trigger: GTCAACAGATTGTGTCAGGCAGGAATGCTGCCCGCC...CAAGGGAGTGTGGTAAGTTTCCGGCCCCTGGAGATCCCACATAGGTGCCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR GCA 90 bp TTGGTGTCCGGGCACTGCAATATAGCACAGGGTGGCCAGCCCTCCCAGTCACCTGCAAATGTGGCCCAGTaGTTCAGCTCTGAGCCAATG +
Preference number: 4 (lower is better)
Translates to: LVSGHCNIAQGGQPSQSPANVAQ*FSSEPM
Trigger: CATTGGCTCAGAGCTGAAGCACTGGGCCACATTTGC...AGGTGACTGGGAGGGCTGGCCACCCTGTGCTATATTGCAGTGCCCGGACACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR GCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCCTGACTGCAGCTGGATaGCATGACCTGGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: SSGDTSKVQKQASGRARTLTAAG*HDLGPQ
Trigger: CTGTGGGCCCAGGTCATGGCATCCAGCTGCAGTCAG...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR GCA 90 bp TTGGTGTCCGGGCACTGCAATATAGCACAGGGTGGCCAGCCCTCCCAGTCACCTAGGCGGAAGGCAATCTaGTCACACTCTTGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LVSGHCNIAQGGQPSQSPRRKAI*SHSCLV
Trigger: GACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCT...AGGTGACTGGGAGGGCTGGCCACCCTGTGCTATATTGCAGTGCCCGGACACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR CCA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTCCGGGGATTCTTCCATaGGGCGCGGGGGCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTPGILP*GAGAGP
Trigger: CGGACCTGCCCCCGCGCCCCATGGAAGAATCCCCGG...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CCA 90 bp ATACATCTCTGCGTCACAGTGGCACAGACCAAGGTCCCTGCCTTGACTCCCTTCCAGGACAGGGGTTCATaGTCCGATGCCCCGGTAGTG +
Preference number: 4 (lower is better)
Translates to: IHLCVTVAQTKVPALTPFQDRGS*SDAPVV
Trigger: CACTACCGGGGCATCGGACCATGAACCCCTGTCCTG...GAAGGGAGTCAAGGCAGGGACCTTGGTCTGTGCCACTGTGACGCAGAGATGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCTCTGTTGACGCTCTGTaGCATGGCCCCGCACACAGA +
Preference number: 4 (lower is better)
Translates to: SSGDTSKVQKQASGRARTSVDAL*HGPAHR
Trigger: TCTGTGTGCGGGGCCATGTCACAGAGCGTCAACAGA...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR TCA 90 bp CTGCAGGTGACTCAGGATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTGCTCGGCAGCATTCCTGCCTaGCACAATCTGTTGACGCTC +
Preference number: 4 (lower is better)
Translates to: LQVTQDLPVCKQAEGNLLGSIPA*HNLLTL
Trigger: GAGCGTCAACAGATTGTGTCAGGCAGGAATGCTGCC...GAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGATCCTGAGTCACCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR TCA 90 bp GTCCTGGCACCTATGTGGGATCTCCAGGGGCCGGAAACTTACCACACTCCCTTGTACCATGGTGCCATGTaGCCCCTAGGTCATCACTGT +
Preference number: 4 (lower is better)
Translates to: VLAPMWDLQGPETYHTPLYHGAM*PLGHHC
Trigger: ACAGTGATGACCTAGGGGTCACATGGCACCATGGTA...CAAGGGAGTGTGGTAAGTTTCCGGCCCCTGGAGATCCCACATAGGTGCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR GCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACTGACTGCAGCTGGATaGCATGACCTGGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGLTAAG*HDLGPQ
Trigger: CTGTGGGCCCAGGTCATGGCATCCAGCTGCAGTCAG...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR GCA 90 bp ATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTGCTCACACTCTTGCTTGGTCCTGACTGCAGCTGGATaGCATGACCTGGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: ISRCVNRRKAICSHSCLVLTAAG*HDLGPQ
Trigger: CTGTGGGCCCAGGTCATGGCATCCAGCTGCAGTCAG...GACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR GCA 90 bp TTGGTGTCCGGGCACTGCAATATAGCACAGGGTGGCCAGCCCTCCCAGTCACCTATGAGTCTACCATGGTaGCATGTGACCCCTAGGTCA +
Preference number: 4 (lower is better)
Translates to: LVSGHCNIAQGGQPSQSPMSLPW*HVTPRS
Trigger: TGACCTAGGGGTCACATGGCACCATGGTAGACTCAT...AGGTGACTGGGAGGGCTGGCCACCCTGTGCTATATTGCAGTGCCCGGACACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR GCA 90 bp ACATTCTACTGTAACCATGGGCCTAATGAGTCTACCATGGTGCCATGTGACCCCCCACAGGGCCCACAGTaGAAGATCCAGGGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: TFYCNHGPNESTMVPCDPPQGPQ*KIQGRD
Trigger: GTCCCGCCCCTGGATCTTGCACTGTGGGCCCTGTGG...GGGGTCACATGGCACCATGGTAGACTCATTAGGCCCATGGTTACAGTAGAATGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR GCA 90 bp ATACATCTCTGCGTCACAGTGGCACAGACCAAGGTCCCTGCCTTGACTCCCTTCCACTCAGGAGGGGGCTaGCCTTTTAATCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: IHLCVTVAQTKVPALTPFHSGGG*PFNPLP
Trigger: GGGGAGAGGATTAAAAGGGCAGCCCCCTCCTGAGTG...GAAGGGAGTCAAGGCAGGGACCTTGGTCTGTGCCACTGTGACGCAGAGATGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp AAGCCTTCACCATGGTCAGTGCTGAGCGCCTCTGCCCGGCACCTGTTTGGTGTCCTAATGAGTCTACCATaGTGCCATGTGACCCCTAGG +
Preference number: 4 (lower is better)
Translates to: KPSPWSVLSASARHLFGVLMSLP*CHVTPR
Trigger: CCTAGGGGTCACATGGCACCATGGTAGACTCATTAG...GACACCAAACAGGTGCCGGGCAGAGGCGCTCAGCACTGACCATGGTGAAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR TCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCCCTGACACAATCTGTTaGCGCTCTGTGACATGGCCC +
Preference number: 4 (lower is better)
Translates to: SSGDTSKVQKQASGRARTPDTIC*RSVTWP
Trigger: GGGCCATGTCACAGAGCGTCAACAGATTGTGTCAGG...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR TCA 90 bp TCGACTCAGGGCCAGTCTCTGAAAGCCTTCACCATGGTCAGTGCTGAGCGCCTCCCAAGGGGGTCTGGTTaGGATAGATACCTAGGTCAA +
Preference number: 4 (lower is better)
Translates to: STQGQSLKAFTMVSAERLPRGSG*DRYLGQ
Trigger: TTGACCTAGGTATCTATCTCAACCAGACCCCCTTGG...GAGGCGCTCAGCACTGACCATGGTGAAGGCTTTCAGAGACTGGCCCTGAGTCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR TCA 90 bp GCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACACTCCACCTGCCAACTTaGCAGAGGTTTTCCCTGACA +
Preference number: 4 (lower is better)
Translates to: AKCRPVQVSLPSHRFQGTLHLPT*QRFSLT
Trigger: TGTCAGGGAAAACCTCTGTCAAGTTGGCAGGTGGAG...TGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCCCACTGTACCAACTaGCCAATCCTCAACCCTCGC +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGPHCTN*PILNPR
Trigger: GCGAGGGTTGAGGATTGGGCAGTTGGTACAGTGGGG...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR GCA 90 bp GCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACAGCAAATGTGGCCCAGTaGTTCAGCTCTGAGCCAATG +
Preference number: 4 (lower is better)
Translates to: AKCRPVQVSLPSHRFQGTANVAQ*FSSEPM
Trigger: CATTGGCTCAGAGCTGAAGCACTGGGCCACATTTGC...TGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGCCGGGGATTCTTCCATaGGGCGCGGGGGCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRPGILP*GAGAGP
Trigger: CGGACCTGCCCCCGCGCCCCATGGAAGAATCCCCGG...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACAATATAGCACAGGGTaGCCAGCCCTCCCAGTCACC +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGQYSTG*PALPVT
Trigger: GGTGACTGGGAGGGCTGGCCACCCTGTGCTATATTG...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CCA 90 bp AGGGCCCTGAAGGCCTTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCCCCTTGGCAACCATGTaGGGGCTCACAGAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: RALKALGNWHRVRVSIAVPLATM*GLTELS
Trigger: CGACAGCTCTGTGAGCCCCCACATGGTTGCCAAGGG...GACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAAGGCCTTCAGGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp TCTACTGTAACCATGGGCCTAATGAGTCTACCATGGTGCCATGTGACCCCTAGGGTCCTGGCACCTATGTaGGATCTCCAGGGGCCGGAA +
Preference number: 4 (lower is better)
Translates to: STVTMGLMSLPWCHVTPRVLAPM*DLQGPE
Trigger: TTCCGGCCCCTGGAGATCCCACATAGGTGCCAGGAC...CCTAGGGGTCACATGGCACCATGGTAGACTCATTAGGCCCATGGTTACAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR TCA 90 bp GCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACAGGAACAGAGGGCTGTTaGAGGAGCATGTTGTCACTT +
Preference number: 4 (lower is better)
Translates to: AKCRPVQVSLPSHRFQGTGTEGC*RSMLSL
Trigger: AAGTGACAACATGCTCCTTCAACAGCCCTCTGTTCC...TGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCTGACACAATCTGTTaGCGCTCTGTGACATGGCCC +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGPDTIC*RSVTWP
Trigger: GGGCCATGTCACAGAGCGTCAACAGATTGTGTCAGG...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR TCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCCATCCTGACTGTAGATaGAGCAAAGGCGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SSGDTSKVQKQASGRARTHPDCR*SKGGQH
Trigger: ATGCTGCCCGCCTTTGCTTCATCTACAGTCAGGATG...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR TCA 90 bp ATACATCTCTGCGTCACAGTGGCACAGACCAAGGTCCCTGCCTTGACTCCCTTCCCTCACCTCACTCCATaGACATCCAGCATCCTGACT +
Preference number: 4 (lower is better)
Translates to: IHLCVTVAQTKVPALTPFPHLTP*TSSILT
Trigger: AGTCAGGATGCTGGATGTTCATGGAGTGAGGTGAGG...GAAGGGAGTCAAGGCAGGGACCTTGGTCTGTGCCACTGTGACGCAGAGATGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGATCAGCTCTGAGCCAATaGCCTCCTCAGTCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGSALSQ*PPQSSP
Trigger: GGGACTTGACTGAGGAGGTCATTGGCTCAGAGCTGA...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR TCA 90 bp ATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTGCTCACACTCTTGCTTGGTCCCAGTGCTTCAGCTCTaGGCCAATGACCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: ISRCVNRRKAICSHSCLVPVLQL*ANDLLS
Trigger: ACTGAGGAGGTCATTGGCTCAGAGCTGAAGCACTGG...GACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR TCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGAAGGTATACGCAGGGATaGCCAGTCTCCCTGACTGCA +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGRYTQG*PVSLTA
Trigger: TGCAGTCAGGGAGACTGGTCATCCCTGCGTATACCT...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR GCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCTCTGTCATCTTCCTaGCGGAACAGAGGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGPLSSS*RNRGLL
Trigger: CAACAGCCCTCTGTTCCGGCAGGAAGATGACAGAGG...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR GCA 90 bp ATACATCTCTGCGTCACAGTGGCACAGACCAAGGTCCCTGCCTTGACTCCCTTCACACAACCACTCTTCTaGTCCCATACAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: IHLCVTVAQTKVPALTPFTQPLF*SHTGQG
Trigger: CCCCTGTCCTGTATGGGAGCAGAAGAGTGGTTGTGT...GAAGGGAGTCAAGGCAGGGACCTTGGTCTGTGCCACTGTGACGCAGAGATGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGAGGCGGGCAGCATTCCTaGCTGACACAATCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGGGQHS*LTQSVD
Trigger: GTCAACAGATTGTGTCAGGCAGGAATGCTGCCCGCC...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR GCA 90 bp GAGCTGTCGACTCAGGGCCAGTCTCTGAAAGCCTTCACCATGGTCAGTGCTGAGCCTCCCAGTCACCTCTaGCACTTCACATTCTACTGT +
Preference number: 4 (lower is better)
Translates to: ELSTQGQSLKAFTMVSAEPPSHL*HFTFYC
Trigger: ACAGTAGAATGTGAAGTGGCAGAGGTGACTGGGAGG...CTCAGCACTGACCATGGTGAAGGCTTTCAGAGACTGGCCCTGAGTCGACAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR GCA 90 bp ATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTGCTCACACTCTTGCTTGGTCTTGGTGTCCGGGCACTaGAATATAGCACAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ISRCVNRRKAICSHSCLVLVSGH*NIAQGG
Trigger: GCCACCCTGTGCTATATTGCAGTGCCCGGACACCAA...GACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR GCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCAGCCTCAGTGAACTaGCTGGAGAGCTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGPASVN*LESSAE
Trigger: TTCAGCAGAGCTCTCCAGGCAGTTCACTGAGGCTGG...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR GCA 90 bp GAAGCAGGCCAGAACAGAGAATATACATTGAGGGTGAGTGTTCAGCAGGTTTTGCCACAGGGCCCACAGTaGAAGATCCAGGGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: EAGQNREYTLRVSVQQVLPQGPQ*KIQGRD
Trigger: GTCCCGCCCCTGGATCTTGCACTGTGGGCCCTGTGG...CAAAACCTGCTGAACACTCACCCTCAATGTATATTCTCTGTTCTGGCCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp GAAGCCTGGACAAGCCTTGGACAGACGACTCCAGGCATATTGAAGATGCAACTATGTGGCTTCCATCAGTaGCTTCAGGGGCCCCCACTG +
Preference number: 4 (lower is better)
Translates to: EAWTSLGQTTPGILKMQLCGFHQ*LQGPPL
Trigger: CAGTGGGGGCCCCTGAAGCCACTGATGGAAGCCACA...TAGTTGCATCTTCAATATGCCTGGAGTCGTCTGTCCAAGGCTTGTCCAGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGAGATGCCCCGGTAGTGTaGCTTCCATCAGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGDAPVV*LPSVAS
Trigger: TGAAGCCACTGATGGAAGCCACACTACCGGGGCATC...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CCA 90 bp ACATTCTACTGTAACCATGGGCCTAATGAGTCTACCATGGTGCCATGTGACCCCCAGGACAGGGGTTCATaGTCCGATGCCCCGGTAGTG +
Preference number: 4 (lower is better)
Translates to: TFYCNHGPNESTMVPCDPQDRGS*SDAPVV
Trigger: CACTACCGGGGCATCGGACCATGAACCCCTGTCCTG...GGGGTCACATGGCACCATGGTAGACTCATTAGGCCCATGGTTACAGTAGAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR CCA 90 bp AAGCCTTCACCATGGTCAGTGCTGAGCGCCTCTGCCCGGCACCTGTTTGGTGTCTCAGAGAATGAGGCCTaGTTTTACATGGTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: KPSPWSVLSASARHLFGVSENEA*FYMVAG
Trigger: TCCAGCTACCATGTAAAACCAGGCCTCATTCTCTGA...GACACCAAACAGGTGCCGGGCAGAGGCGCTCAGCACTGACCATGGTGAAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR CCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACTTACCACACTCCCTTaGCAACCATGTGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGLTTLP*QPCGGS
Trigger: TGAGCCCCCACATGGTTGCCAAGGGAGTGTGGTAAG...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CCA 90 bp GAAGCCTGGACAAGCCTTGGACAGACGACTCCAGGCATATTGAAGATGCAACTAGTCCTGGCACCTATGTaGGATCTCCAGGGGCCGGAA +
Preference number: 4 (lower is better)
Translates to: EAWTSLGQTTPGILKMQLVLAPM*DLQGPE
Trigger: TTCCGGCCCCTGGAGATCCCACATAGGTGCCAGGAC...TAGTTGCATCTTCAATATGCCTGGAGTCGTCTGTCCAAGGCTTGTCCAGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCTCACCTCACTCCATaGACATCCAGCATCCTGACT +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGPHLTP*TSSILT
Trigger: AGTCAGGATGCTGGATGTTCATGGAGTGAGGTGAGG...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR TCA 90 bp AGGGCCCTGAAGGCCTTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCTCAGCTCTGAGCCAATaGCCTCCTCAGTCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: RALKALGNWHRVRVSIAVSALSQ*PPQSSP
Trigger: GGGACTTGACTGAGGAGGTCATTGGCTCAGAGCTGA...GACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAAGGCCTTCAGGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGATACCATGGTGCCATGTaGCCCCTAGGTCATCACTGT +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGYHGAM*PLGHHC
Trigger: ACAGTGATGACCTAGGGGTCACATGGCACCATGGTA...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR TCA 90 bp GCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACATTACAGATGGAAACCTaGGGTCCAGAGAGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: AKCRPVQVSLPSHRFQGTLQMET*GPESSG
Trigger: ACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAA...TGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp TGTAGTCCTCTCTACATGCCTGTAGATTATAGGCCACCCTTCTGCTTTCCTCTTCAGGAAGGGGGCTCCTaGGGGCAAAGAACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: CSPLYMPVDYRPPFCFPLQEGGS*GQRTEA
Trigger: GGCCTCTGTTCTTTGCCCTCAGGAGCCCCCTTCCTG...AAGAGGAAAGCAGAAGGGTGGCCTATAATCTACAGGCATGTAGAGAGGACTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCAGATGCATGGCCTACTaGAGAGGTGGATTATGGCCT +
Preference number: 4 (lower is better)
Translates to: SSGDTSKVQKQASGRARTRCMAY*RGGLWP
Trigger: AGGCCATAATCCACCTCTTCAGTAGGCCATGCATCT...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp GAAGCCTGGACAAGCCTTGGACAGACGACTCCAGGCATATTGAAGATGCAACTACCCCACTGTACCAACTaGCCAATCCTCAACCCTCGC +
Preference number: 4 (lower is better)
Translates to: EAWTSLGQTTPGILKMQLPHCTN*PILNPR
Trigger: GCGAGGGTTGAGGATTGGGCAGTTGGTACAGTGGGG...TAGTTGCATCTTCAATATGCCTGGAGTCGTCTGTCCAAGGCTTGTCCAGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGAACACAACCACTCTTCTaGTCCCATACAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGTQPLF*SHTGQG
Trigger: CCCCTGTCCTGTATGGGAGCAGAAGAGTGGTTGTGT...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR GCA 90 bp ATACATCTCTGCGTCACAGTGGCACAGACCAAGGTCCCTGCCTTGACTCCCTTCATGAGTCTACCATGGTaGCATGTGACCCCTAGGTCA +
Preference number: 4 (lower is better)
Translates to: IHLCVTVAQTKVPALTPFMSLPW*HVTPRS
Trigger: TGACCTAGGGGTCACATGGCACCATGGTAGACTCAT...GAAGGGAGTCAAGGCAGGGACCTTGGTCTGTGCCACTGTGACGCAGAGATGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGCCACAGGGCCCACAGTaGAAGATCCAGGGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLPQGPQ*KIQGRD
Trigger: GTCCCGCCCCTGGATCTTGCACTGTGGGCCCTGTGG...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CCA 90 bp TGCCTGTTACCAAGTTCCAAAGTAGTTTCCACATTTTTGGGTATCTTTTCGGCACCGGGGATTCTTCCATaGGGCGCGGGGGCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: CLLPSSKVVSTFLGIFSAPGILP*GAGAGP
Trigger: CGGACCTGCCCCCGCGCCCCATGGAAGAATCCCCGG...TGCCGAAAAGATACCCAAAAATGTGGAAACTACTTTGGAACTTGGTAACAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000529024.1
CDS-3UTR CCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCACTGTCGGGGCAGAGCTaGACGCCGGGGATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPLSGQS*TPGILP
Trigger: TGGAAGAATCCCCGGCGTCCAGCTCTGCCCCGACAG...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CCA 90 bp CAATCTGCTCACACTCTTGCTTGGTCCCACATTCAAACAAACACCCAAACAAGCCTGTCGGGGCAGAGCTaGACGCCGGGGATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QSAHTLAWSHIQTNTQTSLSGQS*TPGILP
Trigger: TGGAAGAATCCCCGGCGTCCAGCTCTGCCCCGACAG...GCTTGTTTGGGTGTTTGTTTGAATGTGGGACCAAGCAAGAGTGTGAGCAGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR CCA 90 bp CAGAGTCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATGCAGGCACTATGTGTGGCTTCCATCAGTaGCTTCAGGGGCCCCCACTG +
Preference number: 4 (lower is better)
Translates to: QSPLCSQDLLIMKHAGTMCGFHQ*LQGPPL
Trigger: CAGTGGGGGCCCCTGAAGCCACTGATGGAAGCCACA...CATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGACTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CCA 90 bp AGGCGGAAGGCAATCTGCTCACACTCTTGCTTGGTCCCACATTCAAACAAACACTGCCCGGCACCTGTTTaGTGTCCGGGCACTGCAATA +
Preference number: 4 (lower is better)
Translates to: RRKAICSHSCLVPHSNKHCPAPV*CPGTAI
Trigger: TATTGCAGTGCCCGGACACCAAACAGGTGCCGGGCA...GTGTTTGTTTGAATGTGGGACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR CCA 90 bp GCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACACCCTCTGTTTCCTACTaGTTGGGTGTGAGTACAAGA +
Preference number: 4 (lower is better)
Translates to: AKCRPVQVSLPSHRFQGTPSVSY*LGVSTR
Trigger: TCTTGTACTCACACCCAACCAGTAGGAAACAGAGGG...TGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp AGGGCCCTGAAGGCCTTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCATCTCTGCGTCACAGTaGCACAGACCAAGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RALKALGNWHRVRVSIAVISASQ*HRPRSL
Trigger: CAGGGACCTTGGTCTGTGCCACTGTGACGCAGAGAT...GACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAAGGCCTTCAGGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACCACCGGCCCCAAGGCTaGGGAGACTCAGTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNHRPQG*GDSVPN
Trigger: GTTGGGAACTGAGTCTCCCCAGCCTTGGGGCCGGTG...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531509.5
CDS-3UTR TCA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTTCTGTTGACGCTCTGTaGCATGGCCCCGCACACAGA +
Preference number: 4 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTSVDAL*HGPAHR
Trigger: TCTGTGTGCGGGGCCATGTCACAGAGCGTCAACAGA...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCAACCTCACACTCGGATaGGGGGTAAGTCATGTGAAA +
Preference number: 4 (lower is better)
Translates to: SSGDTSKVQKQASGRARTNLTLG*GVSHVK
Trigger: TTTCACATGACTTACCCCTCATCCGAGTGTGAGGTT...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGATCTTCCTTCCTGCCATaGCACCTGCTTGTAACCTCA +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGSSFLP*HLLVTS
Trigger: TGAGGTTACAAGCAGGTGTCATGGCAGGAAGGAAGA...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp GCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACACAACGTGGTATCATCTaGGAGACTCAGCATGAACTA +
Preference number: 4 (lower is better)
Translates to: AKCRPVQVSLPSHRFQGTQRGII*ETQHEL
Trigger: TAGTTCATGCTGAGTCTCTCAGATGATACCACGTTG...TGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp AGGCAGGGGGAAGAAGTAAGAGGAGGGCAATTTAGAGATGGACCTCTTATGAGTCGGAGGGGAGACTGGTaGCCAGGGGAAACAAGTCAA +
Preference number: 4 (lower is better)
Translates to: RQGEEVRGGQFRDGPLMSRRGDW*PGETSQ
Trigger: TTGACTTGTTTCCCCTGGTCACCAGTCTCCCCTCCG...ACTCATAAGAGGTCCATCTCTAAATTGCCCTCCTCTTACTTCTTCCCCCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACGGGTTCATGGTCCGATaGCCCGGTAGTGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNGFMVR*PGSVAS
Trigger: GGAAGCCACACTACCGGGGCATCGGACCATGAACCC...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR GCA 90 bp GAAGCCTGGACAAGCCTTGGACAGACGACTCCAGGCATATTGAAGATGCAACTACCAGCCTCAGTGAACTaGCTGGAGAGCTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: EAWTSLGQTTPGILKMQLPASVN*LESSAE
Trigger: TTCAGCAGAGCTCTCCAGGCAGTTCACTGAGGCTGG...TAGTTGCATCTTCAATATGCCTGGAGTCGTCTGTCCAAGGCTTGTCCAGGCTTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp GAATTCTGGCACTGCAGAGACAAGATGCATGGCCTACTGAAGAGGTGGATTATGGGAGGCCCCTACCCATaGTTCCTGCACTCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: EFWHCRDKMHGLLKRWIMGGPYP*FLHSQC
Trigger: ACACTGAGAGTGCAGGAAGCATGGGTAGGGGCCTCC...CATAATCCACCTCTTCAGTAGGCCATGCATCTTGTCTCTGCAGTGCCAGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp AACCAGCTTCTACTGCTTTATTATAGCTGTATAACCTTGAGCAAATGGCAACCTCCGGGGATTCTTCCATaGGGCGCGGGGGCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: NQLLLLYYSCITLSKWQPPGILP*GAGAGP
Trigger: CGGACCTGCCCCCGCGCCCCATGGAAGAATCCCCGG...AGGTTGCCATTTGCTCAAGGTTATACAGCTATAATAAAGCAGTAGAAGCTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534628.1
CDS-3UTR CCA 90 bp TTTTTCTCTCTTCTTCTGAGCCCTCCAAACTGTTCCAACTTCTGCCTGTTACCACTGTCGGGGCAGAGCTaGACGCCGGGGATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FFSLLLSPPNCSNFCLLPLSGQS*TPGILP
Trigger: TGGAAGAATCCCCGGCGTCCAGCTCTGCCCCGACAG...TGGTAACAGGCAGAAGTTGGAACAGTTTGGAGGGCTCAGAAGAAGAGAGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529024.1
CDS-3UTR CCA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTCGCCTCAGCACCAGGTaGAGAGCATCCTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTRLSTR*RASSSL
Trigger: GAGAGATGAGGATGCTCTCCACCTGGTGCTGAGGCG...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CCA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTGGCCCACAGCAAATGTaGCCCAGTGCTTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTGPQQM*PSASAL
Trigger: CAGAGCTGAAGCACTGGGCCACATTTGCTGTGGGCC...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CCA 90 bp CAGAGTCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATGCAGGCACTATGGGCCCACAGCAAATGTaGCCCAGTGCTTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QSPLCSQDLLIMKHAGTMGPQQM*PSASAL
Trigger: CAGAGCTGAAGCACTGGGCCACATTTGCTGTGGGCC...CATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACTAATGAGTCTACCATaGTGCCATGTGACCCCTAGG +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGLMSLP*CHVTPR
Trigger: CCTAGGGGTCACATGGCACCATGGTAGACTCATTAG...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CCA 90 bp CAGAGTCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATGCAGGCACTATGCAATATAGCACAGGGTaGCCAGCCCTCCCAGTCACC +
Preference number: 4 (lower is better)
Translates to: QSPLCSQDLLIMKHAGTMQYSTG*PALPVT
Trigger: GGTGACTGGGAGGGCTGGCCACCCTGTGCTATATTG...CATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCCCCTCTGTTTCCTACTaGTTGGGTGTGAGTACAAGA +
Preference number: 4 (lower is better)
Translates to: SSGDTSKVQKQASGRARTPSVSY*LGVSTR
Trigger: TCTTGTACTCACACCCAACCAGTAGGAAACAGAGGG...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGAGCTTTTGAATTGGCTTaGGTTCCTACCAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGAFELA*VPTRAG
Trigger: ACCAGCCCTGGTAGGAACCCAAGCCAATTCAAAAGC...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGAAAAGCCTCTTACCCGTaGCTGAAGCTGCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGKASYP*LKLLDV
Trigger: GACATCAAGCAGCTTCAGCCACGGGTAAGAGGCTTT...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp AGCATTTTTGTCAAAGCCATTCAACAAGTCTCTAGGGAGTTCCAAACTTTTCCAGGGCCCCCACTGCACTaGACCCCGGCTCCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: SIFVKAIQQVSREFQTFPGPPLH*TPAPPS
Trigger: AGACGGAGGAGCCGGGGTCCAGTGCAGTGGGGGCCC...TGGAAAAGTTTGGAACTCCCTAGAGACTTGTTGAATGGCTTTGACAAAAATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000529024.1
CDS-3UTR TCA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTTTGTCACTTCTTCCATaGCCTCTGCACTGGACCCCG +
Preference number: 4 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTLSLLP*PLHWTP
Trigger: CGGGGTCCAGTGCAGAGGTCATGGAAGAAGTGACAA...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTCCTGACACAATCTGTTaGCGCTCTGTGACATGGCCC +
Preference number: 4 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTPDTIC*RSVTWP
Trigger: GGGCCATGTCACAGAGCGTCAACAGATTGTGTCAGG...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp CAGAGTCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATGCAGGCACTATGGGCAGCATTCCTGCCTaGCACAATCTGTTGACGCTC +
Preference number: 4 (lower is better)
Translates to: QSPLCSQDLLIMKHAGTMGSIPA*HNLLTL
Trigger: GAGCGTCAACAGATTGTGTCAGGCAGGAATGCTGCC...CATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp AGGGCCCTGAAGGCCTTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCCCAAGGGGGTCTGGTTaGGATAGATACCTAGGTCAA +
Preference number: 4 (lower is better)
Translates to: RALKALGNWHRVRVSIAVPRGSG*DRYLGQ
Trigger: TTGACCTAGGTATCTATCTCAACCAGACCCCCTTGG...GACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAAGGCCTTCAGGGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp TCTGTTAACCTGTCTGTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCCAGTCCCCCTGCAGGTaGCTCAGGATCTCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: SVNLSVTAICIYGNWVLSQSPCR*LRISRC
Trigger: ACACCGGGAGATCCTGAGTCACCTGCAGGGGGACTG...GCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTTAACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR TCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCCCCTGGTTTCCATTTTaGCATCAGAGTCCTTTATGC +
Preference number: 4 (lower is better)
Translates to: SSGDTSKVQKQASGRARTPWFPF*HQSPLC
Trigger: GCATAAAGGACTCTGATGTCAAAATGGAAACCAGGG...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACACCCAACAGGCAGGGTaGAAAGCCTCTTACCCGTGG +
Preference number: 4 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNTQQAG*KASYPW
Trigger: CCACGGGTAAGAGGCTTTTCACCCTGCCTGTTGGGT...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp CAGAGTCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATGCAGGCACTATGTGTGGAGACTCAGGTTaGCCTTTGTGGGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QSPLCSQDLLIMKHAGTMCGDSG*PLWVLW
Trigger: CCAGAGGACCCACAAAGGTCAACCTGAGTCTCCACA...CATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCAGGGAGGCCCAGACTGTaGATTCTGGCACTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPGRPRL*ILALQR
Trigger: TCTCTGCAGTGCCAGAATTCACAGTCTGGGCCTCCC...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCGAGGCCAAGGATGGTTaGCTCATTCATTCATTCAGT +
Preference number: 4 (lower is better)
Translates to: SSGDTSKVQKQASGRARTEAKDG*LIHSFS
Trigger: ACTGAATGAATGAATGAGTCAACCATCCTTGGCCTC...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCAGTGCCTTTTGGGCTGTaGTCCTTGGGAAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPVPFGL*SLGKPG
Trigger: CCCTGGCTTTCCCAAGGATCACAGCCCAAAAGGCAC...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp GAAGCCTGGACAAGCCTTGGACAGACGACTCCAGGCATATTGAAGATGCAACTACGTAGAACGCTTCTCTaGAAAGGCCAGGAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: EAWTSLGQTTPGILKMQLRRTLL*KGQEGV
Trigger: CACACCTTCCTGGCCTTTGCAGAGAAGCGTTCTACG...TAGTTGCATCTTCAATATGCCTGGAGTCGTCTGTCCAAGGCTTGTCCAGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTTTGGTGTCCGGGCACTaGAATATAGCACAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTLVSGH*NIAQGG
Trigger: GCCACCCTGTGCTATATTGCAGTGCCCGGACACCAA...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR GCA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGAGTGCTGAGCGCCTCTaGCCGGCACCTGTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRSAERL*PAPVWC
Trigger: ACACCAAACAGGTGCCGGGCAGAGGCGCTCAGCACT...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGAGTGCTGAGCGCCTCTaGCCGGCACCTGTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLSAERL*PAPVWC
Trigger: ACACCAAACAGGTGCCGGGCAGAGGCGCTCAGCACT...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR GCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCATCTGCTCACACTCTTaGTTGGTCCCACATTCAAAC +
Preference number: 4 (lower is better)
Translates to: SSGDTSKVQKQASGRARTICSHS*LVPHSN
Trigger: GTTTGAATGTGGGACCAAGCAAGAGTGTGAGCAGAT...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR GCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCATCCCTGCACCAATCCTaGCCATCCCTAGACCTCCAC +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPSLHQS*PSLDLH
Trigger: GTGGAGGTCTAGGGATGGGCAGGATTGGTGCAGGGA...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp AGGCAGGGGGAAGAAGTAAGAGGAGGGCAATTTAGAGATGGACCTCTTATGAGTAGGCCCTACGCTGGGTaGAGAGGACAAAGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: RQGEEVRGGQFRDGPLMSRPYAG*RGQREE
Trigger: TTCCTCTCTTTGTCCTCTGCACCCAGCGTAGGGCCT...ACTCATAAGAGGTCCATCTCTAAATTGCCCTCCTCTTACTTCTTCCCCCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGCAGGACAGGGGTTCATaGTCCGATGCCCCGGTAGTG +
Preference number: 4 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLQDRGS*SDAPVV
Trigger: CACTACCGGGGCATCGGACCATGAACCCCTGTCCTG...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCAGGCCCACAGCAAATGTaGCCCAGTGCTTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPGPQQM*PSASAL
Trigger: CAGAGCTGAAGCACTGGGCCACATTTGCTGTGGGCC...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCATGCCCGGCACCTGTTTaGTGTCCGGGCACTGCAATA +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPCPAPV*CPGTAI
Trigger: TATTGCAGTGCCCGGACACCAAACAGGTGCCGGGCA...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGCCCTTGGCAACCATGTaGGGGCTCACAGAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLPLATM*GLTELS
Trigger: CGACAGCTCTGTGAGCCCCCACATGGTTGCCAAGGG...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGGTCCTGGCACCTATGTaGGATCTCCAGGGGCCGGAA +
Preference number: 4 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLVLAPM*DLQGPE
Trigger: TTCCGGCCCCTGGAGATCCCACATAGGTGCCAGGAC...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CCA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACCAATTCCTACTGCCCTaGGGAGGAGGCTGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNQFLLP*GGGCGD
Trigger: GTCTCCACAGCCTCCTCCCCAGGGCAGTAGGAATTG...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp CTGCCTGTTACCAAGTTCCAAAGTAGTTTCCACATTTTTGGGTATCTTTTCGGCCACCGGCCCCAAGGCTaGGGAGACTCAGTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: LPVTKFQSSFHIFGYLFGHRPQG*GDSVPN
Trigger: GTTGGGAACTGAGTCTCCCCAGCCTTGGGGCCGGTG...GCCGAAAAGATACCCAAAAATGTGGAAACTACTTTGGAACTTGGTAACAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529024.1
3UTR CAA 72 bp GTGGCACAGACCAAGGTCCCTGCCTTGACTCCCTTCTaGAGTAGTCCTAAAGAAGTTGATATTCTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: VAQTKVPALTPF*SSPKEVDILGW
Trigger: CCAGCCGAGAATATCAACTTCTTTAGGACTACTCAAGAAGGGAGTCAAGGCAGGGACCTTGGTCTGTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCATTGTCACTTCTTCCATaGCCTCTGCACTGGACCCCG +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPLSLLP*PLHWTP
Trigger: CGGGGTCCAGTGCAGAGGTCATGGAAGAAGTGACAA...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTCCTCACCTCACTCCATaGACATCCAGCATCCTGACT +
Preference number: 4 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTPHLTP*TSSILT
Trigger: AGTCAGGATGCTGGATGTTCATGGAGTGAGGTGAGG...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCACCAGTGCTTCAGCTCTaGGCCAATGACCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPPVLQL*ANDLLS
Trigger: ACTGAGGAGGTCATTGGCTCAGAGCTGAAGCACTGG...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR TCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGGATGACCAGTCTCCCTaGCTGCAGCTGGATGCCATG +
Preference number: 4 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLDDQSP*LQLDAM
Trigger: CATGGCATCCAGCTGCAGTCAGGGAGACTGGTCATC...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCACTCAGGGCCAGTCTCTaGAAGCCTTCACCATGGTCA +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPLRASL*KPSPWS
Trigger: TGACCATGGTGAAGGCTTTCAGAGACTGGCCCTGAG...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR TCA 90 bp GAAGCCTGGACAAGCCTTGGACAGACGACTCCAGGCATATTGAAGATGCAACTAGACAGAGGTTTTCCCTaGCAGTGGGCCTCATATAAG +
Preference number: 4 (lower is better)
Translates to: EAWTSLGQTTPGILKMQLDRGFP*QWASYK
Trigger: CTTATATGAGGCCCACTGTCAGGGAAAACCTCTGTC...TAGTTGCATCTTCAATATGCCTGGAGTCGTCTGTCCAAGGCTTGTCCAGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCTTAAAGTTGCAGTGTTaGGTTAGGACCTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: SSGDTSKVQKQASGRARTLKLQC*VRTFST
Trigger: TGTGGAGAAGGTCCTAACTCAACACTGCAACTTTAA...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp GAAGCAGGCCAGAACAGAGAATATACATTGAGGGTGAGTGTTCAGCAGGTTTTGCCTCTTACCCGTGGCTaGAGCTGCTTGATGTCCTGT +
Preference number: 4 (lower is better)
Translates to: EAGQNREYTLRVSVQQVLPLTRG*SCLMSC
Trigger: ACAGGACATCAAGCAGCTTCAGCCACGGGTAAGAGG...CAAAACCTGCTGAACACTCACCCTCAATGTATATTCTCTGTTCTGGCCTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGAGTAAAAAGGACACAGTaGGGAGTCAGTCAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGVKRTQ*GVSQGV
Trigger: AACTCCTTGACTGACTCCTCACTGTGTCCTTTTTAC...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp TGTAGTCCTCTCTACATGCCTGTAGATTATAGGCCACCCTTCTGCTTTCCTCTTCCTCTGTCATCTTCCTaGCGGAACAGAGGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: CSPLYMPVDYRPPFCFPLPLSSS*RNRGLL
Trigger: CAACAGCCCTCTGTTCCGGCAGGAAGATGACAGAGG...AAGAGGAAAGCAGAAGGGTGGCCTATAATCTACAGGCATGTAGAGAGGACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCAGGCGGGCAGCATTCCTaGCTGACACAATCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPGGQHS*LTQSVD
Trigger: GTCAACAGATTGTGTCAGGCAGGAATGCTGCCCGCC...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR GCA 90 bp TTTCTCTCTTCTTCTGAGCCCTCCAAACTGTTCCAACTTCTGCCTGTTACCAAGGGCGGGCAGCATTCCTaGCTGACACAATCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: FLSSSEPSKLFQLLPVTKGGQHS*LTQSVD
Trigger: GTCAACAGATTGTGTCAGGCAGGAATGCTGCCCGCC...CTTGGTAACAGGCAGAAGTTGGAACAGTTTGGAGGGCTCAGAAGAAGAGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529024.1
CDS-3UTR GCA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTGCAAATGTGGCCCAGTaGTTCAGCTCTGAGCCAATG +
Preference number: 4 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTANVAQ*FSSEPM
Trigger: CATTGGCTCAGAGCTGAAGCACTGGGCCACATTTGC...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR GCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCACCAGCCTCAGTGAACTaGCTGGAGAGCTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPPASVN*LESSAE
Trigger: TTCAGCAGAGCTCTCCAGGCAGTTCACTGAGGCTGG...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR GCA 90 bp GCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACACTATTCCTATCCACTTaGAGTACAGTGTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: AKCRPVQVSLPSHRFQGTLFLST*STVFRK
Trigger: TTTCCTGAACACTGTACTGCAAGTGGATAGGAATAG...TGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp CAGAGTCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATGCAGGCACTATGACAGACCAAGGTCCCTaGCTTGACTCCCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: QSPLCSQDLLIMKHAGTMTDQGP*LDSLLE
Trigger: CTCAAGAAGGGAGTCAAGGCAGGGACCTTGGTCTGT...CATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp AGATCTGGGGGTCTAGAGATCTTCCTAATGGTGAAGATCTTCTCACAGGTAAAGCTAAGTGCCGGCCTGTaGAGGTCTCTCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: RSGGLEIFLMVKIFSQVKLSAGL*RSLFLP
Trigger: GGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAG...CTTTACCTGTGAGAAGATCTTCACCATTAGGAAGATCTCTAGACCCCCAGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp AGGGCCCTGAAGGCCTTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCTGTGAATTCTGGCACTaGAGAGACAAGATGCATGGC +
Preference number: 4 (lower is better)
Translates to: RALKALGNWHRVRVSIAVCEFWH*RDKMHG
Trigger: GCCATGCATCTTGTCTCTGCAGTGCCAGAATTCACA...GACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAAGGCCTTCAGGGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp TGTAGTCCTCTCTACATGCCTGTAGATTATAGGCCACCCTTCTGCTTTCCTCTTCTTACCACACTCCCTTaGCAACCATGTGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: CSPLYMPVDYRPPFCFPLLTTLP*QPCGGS
Trigger: TGAGCCCCCACATGGTTGCCAAGGGAGTGTGGTAAG...AAGAGGAAAGCAGAAGGGTGGCCTATAATCTACAGGCATGTAGAGAGGACTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTGAGAGCTCTGCTGAATaGTGGGTGCATCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTESSAE*WVHLCC
Trigger: GCAGCAAAGATGCACCCACCATTCAGCAGAGCTCTC...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCAAGCCTGGACAAGCCTTaGACAGACGACTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPSLDKP*TDDSRH
Trigger: ATGCCTGGAGTCGTCTGTCCAAGGCTTGTCCAGGCT...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACCTGCACTCTCAGTGTTaGGCCATGTGTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNLHSQC*AMCAGR
Trigger: CCTTCCAGCACACATGGCCCAACACTGAGAGTGCAG...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp TCTGTTAACCTGTCTGTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCGTGTCGGCAGGAGGCTaGCCTGGGTACATACCAGCA +
Preference number: 4 (lower is better)
Translates to: SVNLSVTAICIYGNWVLSVSAGG*PGYIPA
Trigger: TGCTGGTATGTACCCAGGCCAGCCTCCTGCCGACAC...GCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTTAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp TCTGTTAACCTGTCTGTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCCCTTTGTGGGTCCTCTaGGCTACCCAACAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SVNLSVTAICIYGNWVLSPLWVL*ATQQAG
Trigger: CCCTGCCTGTTGGGTAGCCCAGAGGACCCACAAAGG...GCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTTAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR CAA 72 bp CACTATCATGGAATAGGTCCCAGGGCCCTGAAGGCCTaGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCT +
Preference number: 4 (lower is better)
Translates to: HYHGIGPRALKA*GNWHRVRVSIA
Trigger: AGCTATAGACACTCTAACTCTGTGCCAATTACCCAAGGCCTTCAGGGCCCTGGGACCTATTCCATGATAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR CAA 72 bp GGAAATTGGGTCCTAAGCCAATTAATTGCTTTTGAATaGGCTTGGGTTCCTACCAGGGCTGGTGCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: GNWVLSQLIAFE*AWVPTRAGAVP
Trigger: GGGGACTGCACCAGCCCTGGTAGGAACCCAAGCCAATTCAAAAGCAATTAATTGGCTTAGGACCCAATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR TCA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTGGAACAGAGGGCTGTTaGAGGAGCATGTTGTCACTT +
Preference number: 4 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTGTEGC*RSMLSL
Trigger: AAGTGACAACATGCTCCTTCAACAGCCCTCTGTTCC...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp GAAGCAGGCCAGAACAGAGAATATACATTGAGGGTGAGTGTTCAGCAGGTTTTGCATCCTGACTGTAGATaGAGCAAAGGCGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: EAGQNREYTLRVSVQQVLHPDCR*SKGGQH
Trigger: ATGCTGCCCGCCTTTGCTTCATCTACAGTCAGGATG...CAAAACCTGCTGAACACTCACCCTCAATGTATATTCTCTGTTCTGGCCTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGAGGTATACGCAGGGATaGCCAGTCTCCCTGACTGCA +
Preference number: 4 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLRYTQG*PVSLTA
Trigger: TGCAGTCAGGGAGACTGGTCATCCCTGCGTATACCT...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp TGTAGTCCTCTCTACATGCCTGTAGATTATAGGCCACCCTTCTGCTTTCCTCTTTACCATGGTGCCATGTaGCCCCTAGGTCATCACTGT +
Preference number: 4 (lower is better)
Translates to: CSPLYMPVDYRPPFCFPLYHGAM*PLGHHC
Trigger: ACAGTGATGACCTAGGGGTCACATGGCACCATGGTA...AAGAGGAAAGCAGAAGGGTGGCCTATAATCTACAGGCATGTAGAGAGGACTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTCCAAGGGGGTCTGGTTaGGATAGATACCTAGGTCAA +
Preference number: 4 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTPRGSG*DRYLGQ
Trigger: TTGACCTAGGTATCTATCTCAACCAGACCCCCTTGG...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp AGGCGGAAGGCAATCTGCTCACACTCTTGCTTGGTCCCACATTCAAACAAACACTTACAGATGGAAACCTaGGGTCCAGAGAGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RRKAICSHSCLVPHSNKHLQMET*GPESSG
Trigger: ACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAA...GTGTTTGTTTGAATGTGGGACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR TCA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGAATGGAGAACCACAAATaGTTTAGAGCCAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGMENHK*FRAKEW
Trigger: CCATTCCTTGGCTCTAAATCATTTGTGGTTCTCCAT...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp GAAGCAGGCCAGAACAGAGAATATACATTGAGGGTGAGTGTTCAGCAGGTTTTGTGGAAGGATCCATTCTaGGTCCAAGGGACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: EAGQNREYTLRVSVQQVLWKDPF*VQGTGR
Trigger: CCTTCCTGTCCCTTGGACTCAGAATGGATCCTTCCA...CAAAACCTGCTGAACACTCACCCTCAATGTATATTCTCTGTTCTGGCCTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACCTGCTTGATGTCCTGTaGATATCGGAGGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNLLDVL*ISEGRL
Trigger: CAGTCTCCCCTCCGATATTCACAGGACATCAAGCAG...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCGTGTTCAGCAGGTTTTaGATGCTACACAATCTACAA +
Preference number: 4 (lower is better)
Translates to: SSGDTSKVQKQASGRARTVFSRF*MLHNLQ
Trigger: TTGTAGATTGTGTAGCATTCAAAACCTGCTGAACAC...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGCTTCCCTGGACAGCCTaGGAGTTGAGCAAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLLPWTA*ELSKGS
Trigger: GGAACCTTTGCTCAACTCTCAGGCTGTCCAGGGAAG...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531509.5
CDS-3UTR GCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCACGTAGAACGCTTCTCTaGAAAGGCCAGGAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPRRTLL*KGQEGV
Trigger: CACACCTTCCTGGCCTTTGCAGAGAAGCGTTCTACG...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR GCA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTCCTCCCAGTCACCTCTaGCACTTCACATTCTACTGT +
Preference number: 4 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTPPSHL*HFTFYC
Trigger: ACAGTAGAATGTGAAGTGGCAGAGGTGACTGGGAGG...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR GCA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGTTGGTGTCCGGGCACTaGAATATAGCACAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRLVSGH*NIAQGG
Trigger: GCCACCCTGTGCTATATTGCAGTGCCCGGACACCAA...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp TGTAGTCCTCTCTACATGCCTGTAGATTATAGGCCACCCTTCTGCTTTCCTCTTAGGCGGAAGGCAATCTaGTCACACTCTTGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: CSPLYMPVDYRPPFCFPLRRKAI*SHSCLV
Trigger: GACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCT...AAGAGGAAAGCAGAAGGGTGGCCTATAATCTACAGGCATGTAGAGAGGACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp ACATTCTACTGTAACCATGGGCCTAATGAGTCTACCATGGTGCCATGTGACCCCCAACTCCTAGTTCAGTaGTCTTTCCACTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: TFYCNHGPNESTMVPCDPQLLVQ*SFHCSS
Trigger: GCTACTGCAGTGGAAAGAGCACTGAACTAGGAGTTG...GGGGTCACATGGCACCATGGTAGACTCATTAGGCCCATGGTTACAGTAGAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR GCA 90 bp AGATCTGGGGGTCTAGAGATCTTCCTAATGGTGAAGATCTTCTCACAGGTAAAGTCTCCACAAGCTAAGTaGCGGCCTGTGCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RSGGLEIFLMVKIFSQVKSPQAK*RPVQVS
Trigger: AGAGACCTGCACAGGCCGGCACTTAGCTTGTGGAGA...CTTTACCTGTGAGAAGATCTTCACCATTAGGAAGATCTCTAGACCCCCAGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp GAAGCCTGGACAAGCCTTGGACAGACGACTCCAGGCATATTGAAGATGCAACTATCTTTTCTTCACAGCTaGTACCACCTGCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: EAWTSLGQTTPGILKMQLSFLHS*YHLPCL
Trigger: AAGACAGGGCAGGTGGTAGCAGCTGTGAAGAAAAGA...TAGTTGCATCTTCAATATGCCTGGAGTCGTCTGTCCAAGGCTTGTCCAGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp TCTGTTAACCTGTCTGTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCGCCTCCTCTCTTCAGTaGCACAGCCCCGAGCTCTTA +
Preference number: 4 (lower is better)
Translates to: SVNLSVTAICIYGNWVLSASSLQ*HSPELL
Trigger: TAAGAGCTCGGGGCTGTGGCACTGAAGAGAGGAGGC...GCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTTAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531509.5
CDS-3UTR CCA 90 bp AACCAGCTTCTACTGCTTTATTATAGCTGTATAACCTTGAGCAAATGGCAACCTCTGTCGGGGCAGAGCTaGACGCCGGGGATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: NQLLLLYYSCITLSKWQPLSGQS*TPGILP
Trigger: TGGAAGAATCCCCGGCGTCCAGCTCTGCCCCGACAG...AGGTTGCCATTTGCTCAAGGTTATACAGCTATAATAAAGCAGTAGAAGCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534628.1
CDS-3UTR CCA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACTATGTAGAGCAGGGCTaGGATCCGGTAGGTAATCCC +
Preference number: 4 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNYVEQG*DPVGNP
Trigger: GGGATTACCTACCGGATCCCAGCCCTGCTCTACATA...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CCA 90 bp GGAGGGCAATTTAGAGATGGACCTCTTATGAGTACTGGTATTATACATCTCTGCCGCCTCAGCACCAGGTaGAGAGCATCCTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: GGQFRDGPLMSTGIIHLCRLSTR*RASSSL
Trigger: GAGAGATGAGGATGCTCTCCACCTGGTGCTGAGGCG...GCAGAGATGTATAATACCAGTACTCATAAGAGGTCCATCTCTAAATTGCCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGGATGCCCCGGTAGTGTaGCTTCCATCAGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLDAPVV*LPSVAS
Trigger: TGAAGCCACTGATGGAAGCCACACTACCGGGGCATC...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CCA 90 bp TTTTTCTCTCTTCTTCTGAGCCCTCCAAACTGTTCCAACTTCTGCCTGTTACCAGATGCCCCGGTAGTGTaGCTTCCATCAGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: FFSLLLSPPNCSNFCLLPDAPVV*LPSVAS
Trigger: TGAAGCCACTGATGGAAGCCACACTACCGGGGCATC...TGGTAACAGGCAGAAGTTGGAACAGTTTGGAGGGCTCAGAAGAAGAGAGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529024.1
CDS-3UTR CCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCGTTTTACATGGTAGCTaGAAGCAAAAGAACCAGGAA +
Preference number: 4 (lower is better)
Translates to: SSGDTSKVQKQASGRARTVLHGS*KQKNQE
Trigger: TTCCTGGTTCTTTTGCTTCCAGCTACCATGTAAAAC...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CCA 90 bp TCTGTTAACCTGTCTGTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCCAATATAGCACAGGGTaGCCAGCCCTCCCAGTCACC +
Preference number: 4 (lower is better)
Translates to: SVNLSVTAICIYGNWVLSQYSTG*PALPVT
Trigger: GGTGACTGGGAGGGCTGGCCACCCTGTGCTATATTG...GCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTTAACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CCA 90 bp TTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCTTTGTTGGTCATCTGTGCCCGGCACCTGTTTaGTGTCCGGGCACTGCAATA +
Preference number: 4 (lower is better)
Translates to: LGNWHRVRVSIAVFVGHLCPAPV*CPGTAI
Trigger: TATTGCAGTGCCCGGACACCAAACAGGTGCCGGGCA...CAGATGACCAACAAAGACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp GAAGCAGGCCAGAACAGAGAATATACATTGAGGGTGAGTGTTCAGCAGGTTTTGTTGCTGCTAGAGTCCTaGCACCTATGTGGGATCTCC +
Preference number: 4 (lower is better)
Translates to: EAGQNREYTLRVSVQQVLLLLES*HLCGIS
Trigger: GGAGATCCCACATAGGTGCCAGGACTCTAGCAGCAA...CAAAACCTGCTGAACACTCACCCTCAATGTATATTCTCTGTTCTGGCCTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCATTGCTGCTAGAGTCCTaGCACCTATGTGGGATCTCC +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPLLLES*HLCGIS
Trigger: GGAGATCCCACATAGGTGCCAGGACTCTAGCAGCAA...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CCA 90 bp CAGAGTCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATGCAGGCACTATGGCTTTTGAATTGGCTTaGGTTCCTACCAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: QSPLCSQDLLIMKHAGTMAFELA*VPTRAG
Trigger: ACCAGCCCTGGTAGGAACCCAAGCCAATTCAAAAGC...CATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CCA 90 bp CAGAGTCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATGCAGGCACTATGATTTCACCCAACAGCTaGAAGGTCCTACATGCCAGG +
Preference number: 4 (lower is better)
Translates to: QSPLCSQDLLIMKHAGTMISPNS*KVLHAR
Trigger: CCTGGCATGTAGGACCTTCCAGCTGTTGGGTGAAAT...CATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp CAGAGTCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATGCAGGCACTATGATAGGCTGGGCCTGGTaGCTTATGCCTACAATCTCA +
Preference number: 4 (lower is better)
Translates to: QSPLCSQDLLIMKHAGTMIGWAW*LMPTIS
Trigger: TGAGATTGTAGGCATAAGCCACCAGGCCCAGCCTAT...CATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531509.5
CDS-3UTR TCA 90 bp ACATTTTTCTCTCTTCTTCTGAGCCCTCCAAACTGTTCCAACTTCTGCCTGTTACCTGACACAATCTGTTaGCGCTCTGTGACATGGCCC +
Preference number: 4 (lower is better)
Translates to: TFFSLLLSPPNCSNFCLLPDTIC*RSVTWP
Trigger: GGGCCATGTCACAGAGCGTCAACAGATTGTGTCAGG...TAACAGGCAGAAGTTGGAACAGTTTGGAGGGCTCAGAAGAAGAGAGAAAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529024.1
CDS-3UTR TCA 90 bp TTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCTTTGTTGGTCATCTGGGCAGCATTCCTGCCTaGCACAATCTGTTGACGCTC +
Preference number: 4 (lower is better)
Translates to: LGNWHRVRVSIAVFVGHLGSIPA*HNLLTL
Trigger: GAGCGTCAACAGATTGTGTCAGGCAGGAATGCTGCC...CAGATGACCAACAAAGACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp TTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCTTTGTTGGTCATCTGCCAGTGCTTCAGCTCTaGGCCAATGACCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LGNWHRVRVSIAVFVGHLPVLQL*ANDLLS
Trigger: ACTGAGGAGGTCATTGGCTCAGAGCTGAAGCACTGG...CAGATGACCAACAAAGACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp TCTGTTAACCTGTCTGTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCCTCAGGGCCAGTCTCTaGAAGCCTTCACCATGGTCA +
Preference number: 4 (lower is better)
Translates to: SVNLSVTAICIYGNWVLSLRASL*KPSPWS
Trigger: TGACCATGGTGAAGGCTTTCAGAGACTGGCCCTGAG...GCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTTAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR TCA 90 bp CAGAGTCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATGCAGGCACTATGTTACAGATGGAAACCTaGGGTCCAGAGAGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: QSPLCSQDLLIMKHAGTMLQMET*GPESSG
Trigger: ACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAA...CATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCCTAGGGATGAGAAGATaGGAAATCTTAGAACCAATA +
Preference number: 4 (lower is better)
Translates to: SSGDTSKVQKQASGRARTLGMRR*EILEPI
Trigger: TATTGGTTCTAAGATTTCTCATCTTCTCATCCCTAG...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR TCA 90 bp CAGAGTCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATGCAGGCACTATGAACCTCACACTCGGATaGGGGGTAAGTCATGTGAAA +
Preference number: 4 (lower is better)
Translates to: QSPLCSQDLLIMKHAGTMNLTLG*GVSHVK
Trigger: TTTCACATGACTTACCCCTCATCCGAGTGTGAGGTT...CATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGACTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR GCA 90 bp AGCATTTTTGTCAAAGCCATTCAACAAGTCTCTAGGGAGTTCCAAACTTTTCCAGGGTTCATGGTCCGATaGCCCGGTAGTGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SIFVKAIQQVSREFQTFPGFMVR*PGSVAS
Trigger: GGAAGCCACACTACCGGGGCATCGGACCATGAACCC...TGGAAAAGTTTGGAACTCCCTAGAGACTTGTTGAATGGCTTTGACAAAAATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529024.1
CDS-3UTR GCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGCCACCACCCTCCACCTaGCAACTTGACAGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLPPPST*QLDRGF
Trigger: AAAACCTCTGTCAAGTTGGCAGGTGGAGGGTGGTGG...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp CCATTCAACAAGTCTCTAGGGAGTTCCAAACTTTTCCACATTTTTCTCTCTTCTTGTGGCTTCCATCAGTaGCTTCAGGGGCCCCCACTG +
Preference number: 4 (lower is better)
Translates to: PFNKSLGSSKLFHIFLSSCGFHQ*LQGPPL
Trigger: CAGTGGGGGCCCCTGAAGCCACTGATGGAAGCCACA...AGAAGAGAGAAAAATGTGGAAAAGTTTGGAACTCCCTAGAGACTTGTTGAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000529024.1
CDS-3UTR CCA 90 bp AGCATTTTTGTCAAAGCCATTCAACAAGTCTCTAGGGAGTTCCAAACTTTTCCACAGGACAGGGGTTCATaGTCCGATGCCCCGGTAGTG +
Preference number: 4 (lower is better)
Translates to: SIFVKAIQQVSREFQTFPQDRGS*SDAPVV
Trigger: CACTACCGGGGCATCGGACCATGAACCCCTGTCCTG...TGGAAAAGTTTGGAACTCCCTAGAGACTTGTTGAATGGCTTTGACAAAAATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000529024.1
CDS-3UTR CCA 90 bp GAAGCCTGGACAAGCCTTGGACAGACGACTCCAGGCATATTGAAGATGCAACTATCAGAGAATGAGGCCTaGTTTTACATGGTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: EAWTSLGQTTPGILKMQLSENEA*FYMVAG
Trigger: TCCAGCTACCATGTAAAACCAGGCCTCATTCTCTGA...TAGTTGCATCTTCAATATGCCTGGAGTCGTCTGTCCAAGGCTTGTCCAGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTTGCTGCTAGAGTCCTaGCACCTATGTGGGATCTCC +
Preference number: 4 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLLLLES*HLCGIS
Trigger: GGAGATCCCACATAGGTGCCAGGACTCTAGCAGCAA...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CCA 90 bp TGTAGTCCTCTCTACATGCCTGTAGATTATAGGCCACCCTTCTGCTTTCCTCTTGCTTTTGAATTGGCTTaGGTTCCTACCAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: CSPLYMPVDYRPPFCFPLAFELA*VPTRAG
Trigger: ACCAGCCCTGGTAGGAACCCAAGCCAATTCAAAAGC...AAGAGGAAAGCAGAAGGGTGGCCTATAATCTACAGGCATGTAGAGAGGACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGAGAAACCCAGAAGCCTaGACAAGCCTTGGACAGACG +
Preference number: 4 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRRNPEA*TSLGQT
Trigger: CGTCTGTCCAAGGCTTGTCCAGGCTTCTGGGTTTCT...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp AGGGCCCTGAAGGCCTTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCTCTCCCTTGGAGGCCTaGAAAACTAGTAACTATAGA +
Preference number: 4 (lower is better)
Translates to: RALKALGNWHRVRVSIAVSPLEA*KTSNYR
Trigger: TCTATAGTTACTAGTTTTCCAGGCCTCCAAGGGAGA...GACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAAGGCCTTCAGGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTCCTCAGAATCTCCCTTaGAGGCCTGGAAAACTAGTA +
Preference number: 4 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTPQNLP*RPGKLV
Trigger: TACTAGTTTTCCAGGCCTCCAAGGGAGATTCTGAGG...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp TTCTGCCTGTTACCAAGTTCCAAAGTAGTTTCCACATTTTTGGGTATCTTTTCGTCTGTTGACGCTCTGTaGCATGGCCCCGCACACAGA +
Preference number: 4 (lower is better)
Translates to: FCLLPSSKVVSTFLGIFSSVDAL*HGPAHR
Trigger: TCTGTGTGCGGGGCCATGTCACAGAGCGTCAACAGA...CGAAAAGATACCCAAAAATGTGGAAACTACTTTGGAACTTGGTAACAGGCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529024.1
CDS-3UTR TCA 90 bp TCTGTTAACCTGTCTGTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCCATCCTGACTGTAGATaGAGCAAAGGCGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SVNLSVTAICIYGNWVLSHPDCR*SKGGQH
Trigger: ATGCTGCCCGCCTTTGCTTCATCTACAGTCAGGATG...GCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTTAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR TCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCATCCAGAGAGTTCAGGTaGCACATCCAAGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPSREFR*HIQGPK
Trigger: TTTTGGACCTTGGATGTGTCACCTGAACTCTCTGGA...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR TCA 90 bp ATCTCCCGGTGTGTAAACAGGCGGAAGGCAATCTGCTCACACTCTTGCTTGGTCCTAGGGATGAGAAGATaGGAAATCTTAGAACCAATA +
Preference number: 4 (lower is better)
Translates to: ISRCVNRRKAICSHSCLVLGMRR*EILEPI
Trigger: TATTGGTTCTAAGATTTCTCATCTTCTCATCCCTAG...GACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR TCA 90 bp CAGAGTCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATGCAGGCACTATGCCCTGGTTTCCATTTTaGCATCAGAGTCCTTTATGC +
Preference number: 4 (lower is better)
Translates to: QSPLCSQDLLIMKHAGTMPWFPF*HQSPLC
Trigger: GCATAAAGGACTCTGATGTCAAAATGGAAACCAGGG...CATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp AGGCAGGGGGAAGAAGTAAGAGGAGGGCAATTTAGAGATGGACCTCTTATGAGTATGATGCTTTCTGGATaGGGAAGAGAAGGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: RQGEEVRGGQFRDGPLMSMMLSG*GREGKQ
Trigger: CTGCTTACCTTCTCTTCCTCATCCAGAAAGCATCAT...ACTCATAAGAGGTCCATCTCTAAATTGCCCTCCTCTTACTTCTTCCCCCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGGTGGCTGAAGCTGCTTaGTGTCCTGTGAATATCGGA +
Preference number: 4 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRVAEAA*CPVNIG
Trigger: TCCGATATTCACAGGACATCAAGCAGCTTCAGCCAC...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp ACATTTTTCTCTCTTCTTCTGAGCCCTCCAAACTGTTCCAACTTCTGCCTGTTAACACAACCACTCTTCTaGTCCCATACAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: TFFSLLLSPPNCSNFCLLTQPLF*SHTGQG
Trigger: CCCCTGTCCTGTATGGGAGCAGAAGAGTGGTTGTGT...TAACAGGCAGAAGTTGGAACAGTTTGGAGGGCTCAGAAGAAGAGAGAAAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529024.1
CDS-3UTR GCA 90 bp TCTGTTAACCTGTCTGTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCACACAACCACTCTTCTaGTCCCATACAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: SVNLSVTAICIYGNWVLSTQPLF*SHTGQG
Trigger: CCCCTGTCCTGTATGGGAGCAGAAGAGTGGTTGTGT...GCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTTAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR GCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGCCTCCCAGTCACCTCTaGCACTTCACATTCTACTGT +
Preference number: 4 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLPPSHL*HFTFYC
Trigger: ACAGTAGAATGTGAAGTGGCAGAGGTGACTGGGAGG...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR GCA 90 bp TCTGTTAACCTGTCTGTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCAGGCGGAAGGCAATCTaGTCACACTCTTGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SVNLSVTAICIYGNWVLSRRKAI*SHSCLV
Trigger: GACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCT...GCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTTAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR GCA 90 bp CAGAGTCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATGCAGGCACTATGACTGATCATGAAGCATaGAGGCACTATGCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: QSPLCSQDLLIMKHAGTMTDHEA*RHYACP
Trigger: AGGACAAGCATAGTGCCTGCATGCTTCATGATCAGT...CATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGACTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR GCA 90 bp CAGAGTCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATGCAGGCACTATGCATCAGAGTCCTTTATaGAGCCAGGACTTACTGATC +
Preference number: 4 (lower is better)
Translates to: QSPLCSQDLLIMKHAGTMHQSPL*SQDLLI
Trigger: GATCAGTAAGTCCTGGCTGCATAAAGGACTCTGATG...CATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGACTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR GCA 90 bp AGGGCCCTGAAGGCCTTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCTCAGCAGGTTTTGAATaGTACACAATCTACAAAGGG +
Preference number: 4 (lower is better)
Translates to: RALKALGNWHRVRVSIAVSAGFE*YTIYKG
Trigger: CCCTTTGTAGATTGTGTAGCATTCAAAACCTGCTGA...GACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAAGGCCTTCAGGGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp GGAGGGCAATTTAGAGATGGACCTCTTATGAGTACTGGTATTATACATCTCTGCTATGTAGAGCAGGGCTaGGATCCGGTAGGTAATCCC +
Preference number: 4 (lower is better)
Translates to: GGQFRDGPLMSTGIIHLCYVEQG*DPVGNP
Trigger: GGGATTACCTACCGGATCCCAGCCCTGCTCTACATA...GCAGAGATGTATAATACCAGTACTCATAAGAGGTCCATCTCTAAATTGCCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp AACCAGCTTCTACTGCTTTATTATAGCTGTATAACCTTGAGCAAATGGCAACCTCGCCTCAGCACCAGGTaGAGAGCATCCTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: NQLLLLYYSCITLSKWQPRLSTR*RASSSL
Trigger: GAGAGATGAGGATGCTCTCCACCTGGTGCTGAGGCG...AGGTTGCCATTTGCTCAAGGTTATACAGCTATAATAAAGCAGTAGAAGCTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534628.1
CDS-3UTR CCA 90 bp TTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCTTTGTTGGTCATCTGGAGAGCTCTGCTGAATaGTGGGTGCATCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LGNWHRVRVSIAVFVGHLESSAE*WVHLCC
Trigger: GCAGCAAAGATGCACCCACCATTCAGCAGAGCTCTC...CAGATGACCAACAAAGACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp CAATCTGCTCACACTCTTGCTTGGTCCCACATTCAAACAAACACCCAAACAAGCCCCTCTGTTTCCTACTaGTTGGGTGTGAGTACAAGA +
Preference number: 4 (lower is better)
Translates to: QSAHTLAWSHIQTNTQTSPSVSY*LGVSTR
Trigger: TCTTGTACTCACACCCAACCAGTAGGAAACAGAGGG...GCTTGTTTGGGTGTTTGTTTGAATGTGGGACCAAGCAAGAGTGTGAGCAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR CCA 90 bp ATACATCTCTGCGTCACAGTGGCACAGACCAAGGTCCCTGCCTTGACTCCCTTCTGCATCTATGGAAATTaGGTCCTAAGCCAATTAATT +
Preference number: 4 (lower is better)
Translates to: IHLCVTVAQTKVPALTPFCIYGN*VLSQLI
Trigger: AATTAATTGGCTTAGGACCCAATTTCCATAGATGCA...GAAGGGAGTCAAGGCAGGGACCTTGGTCTGTGCCACTGTGACGCAGAGATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp GAAGCCTGGACAAGCCTTGGACAGACGACTCCAGGCATATTGAAGATGCAACTAAGCCACTCTAAGCCATaGCTTAAGCAATCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: EAWTSLGQTTPGILKMQLSHSKP*LKQSAK
Trigger: TTTAGCAGATTGCTTAAGCCATGGCTTAGAGTGGCT...TAGTTGCATCTTCAATATGCCTGGAGTCGTCTGTCCAAGGCTTGTCCAGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGCCTGGTTGTACGACTTaGCCATCCTCCCTATTCCTA +
Preference number: 4 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRPGCTT*PSSLFL
Trigger: TAGGAATAGGGAGGATGGCCAAGTCGTACAACCAGG...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp AGGCAGGGGGAAGAAGTAAGAGGAGGGCAATTTAGAGATGGACCTCTTATGAGTAAGGCCTTGGGTAATTaGCACAGAGTTAGAGTGTCT +
Preference number: 4 (lower is better)
Translates to: RQGEEVRGGQFRDGPLMSKALGN*HRVRVS
Trigger: AGACACTCTAACTCTGTGCCAATTACCCAAGGCCTT...ACTCATAAGAGGTCCATCTCTAAATTGCCCTCCTCTTACTTCTTCCCCCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp TTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCTTTGTTGGTCATCTGAGGGTACCACTATCATaGAATAGGTCCCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LGNWHRVRVSIAVFVGHLRVPLS*NRSQGP
Trigger: AGGGCCCTGGGACCTATTCCATGATAGTGGTACCCT...CAGATGACCAACAAAGACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCATCTGAGTGGCTGAAATaGGTTCAGTTAGGGTACCAC +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPSEWLK*VQLGYH
Trigger: GTGGTACCCTAACTGAACCCATTTCAGCCACTCAGA...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp TGTAGTCCTCTCTACATGCCTGTAGATTATAGGCCACCCTTCTGCTTTCCTCTTGGCCTACTGAAGAGGTaGATTATGGCCTACTCAAGA +
Preference number: 4 (lower is better)
Translates to: CSPLYMPVDYRPPFCFPLGLLKR*IMAYSR
Trigger: TCTTGAGTAGGCCATAATCCACCTCTTCAGTAGGCC...AAGAGGAAAGCAGAAGGGTGGCCTATAATCTACAGGCATGTAGAGAGGACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp GGAGGGCAATTTAGAGATGGACCTCTTATGAGTACTGGTATTATACATCTCTGCTTGGGCTGTGATCCTTaGGAAAGCCAGGGACAACCA +
Preference number: 4 (lower is better)
Translates to: GGQFRDGPLMSTGIIHLCLGCDP*ESQGQP
Trigger: TGGTTGTCCCTGGCTTTCCCAAGGATCACAGCCCAA...GCAGAGATGTATAATACCAGTACTCATAAGAGGTCCATCTCTAAATTGCCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCACCCGAGCTCTTATATTaGTCTGTAGCTCGGTATCAC +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPPELLY*SVARYH
Trigger: GTGATACCGAGCTACAGACCAATATAAGAGCTCGGG...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531509.5
3UTR CAA 72 bp TTCCTATCCACTTGCAGTACAGTGTTCAGGAAAGCTTaGCTAAACAAGGAGTTTCTACCACTCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: FLSTCSTVFRKA*LNKEFLPLRRG
Trigger: CCCCCTCCTGAGTGGTAGAAACTCCTTGTTTAGCAAAGCTTTCCTGAACACTGTACTGCAAGTGGATAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR CAA 72 bp GTGTGTAAACAGGCGGAAGGCAATCTGCTCACACTCTaGCTTGGTCCCACATTCAAACAAACACCCAAACAA +
Preference number: 4 (lower is better)
Translates to: VCKQAEGNLLTL*LGPTFKQTPKQ
Trigger: TTGTTTGGGTGTTTGTTTGAATGTGGGACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCTGTTTACACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR TCA 90 bp AACCAGCTTCTACTGCTTTATTATAGCTGTATAACCTTGAGCAAATGGCAACCTTTGTCACTTCTTCCATaGCCTCTGCACTGGACCCCG +
Preference number: 4 (lower is better)
Translates to: NQLLLLYYSCITLSKWQPLSLLP*PLHWTP
Trigger: CGGGGTCCAGTGCAGAGGTCATGGAAGAAGTGACAA...AGGTTGCCATTTGCTCAAGGTTATACAGCTATAATAAAGCAGTAGAAGCTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534628.1
CDS-3UTR TCA 90 bp CCATTCAACAAGTCTCTAGGGAGTTCCAAACTTTTCCACATTTTTCTCTCTTCTGGCAGCATTCCTGCCTaGCACAATCTGTTGACGCTC +
Preference number: 4 (lower is better)
Translates to: PFNKSLGSSKLFHIFLSSGSIPA*HNLLTL
Trigger: GAGCGTCAACAGATTGTGTCAGGCAGGAATGCTGCC...AGAAGAGAGAAAAATGTGGAAAAGTTTGGAACTCCCTAGAGACTTGTTGAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529024.1
CDS-3UTR TCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTCCAGAGAGTTCAGGTaGCACATCCAAGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLSREFR*HIQGPK
Trigger: TTTTGGACCTTGGATGTGTCACCTGAACTCTCTGGA...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp AGGGCCCTGAAGGCCTTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCCTAGGGATGAGAAGATaGGAAATCTTAGAACCAATA +
Preference number: 4 (lower is better)
Translates to: RALKALGNWHRVRVSIAVLGMRR*EILEPI
Trigger: TATTGGTTCTAAGATTTCTCATCTTCTCATCCCTAG...GACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAAGGCCTTCAGGGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp TCTGTTAACCTGTCTGTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCTCTTCCTTCCTGCCATaGCACCTGCTTGTAACCTCA +
Preference number: 4 (lower is better)
Translates to: SVNLSVTAICIYGNWVLSSSFLP*HLLVTS
Trigger: TGAGGTTACAAGCAGGTGTCATGGCAGGAAGGAAGA...GCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTTAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp CAGAGTCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATGCAGGCACTATGGAGAGCCTACAGAACTaGGCATTATTAAAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: QSPLCSQDLLIMKHAGTMESLQN*ALLKGC
Trigger: ACACCCTTTTAATAATGCTCAGTTCTGTAGGCTCTC...CATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp CAGAGTCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATGCAGGCACTATGGTTCTCCCTAGAAAATaGTGCTTTCTGGATGAGGAA +
Preference number: 4 (lower is better)
Translates to: QSPLCSQDLLIMKHAGTMVLPRK*CFLDEE
Trigger: TTCCTCATCCAGAAAGCATCATTTTCTAGGGAGAAC...CATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp TGTAGTCCTCTCTACATGCCTGTAGATTATAGGCCACCCTTCTGCTTTCCTCTTGAGGGAAAATACCAGTaGAGTGAGAACCCCAAATCA +
Preference number: 4 (lower is better)
Translates to: CSPLYMPVDYRPPFCFPLEGKYQ*SENPKS
Trigger: TGATTTGGGGTTCTCACTTCACTGGTATTTTCCCTC...AAGAGGAAAGCAGAAGGGTGGCCTATAATCTACAGGCATGTAGAGAGGACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp AACCAGCTTCTACTGCTTTATTATAGCTGTATAACCTTGAGCAAATGGCAACCTCCTCTGTCATCTTCCTaGCGGAACAGAGGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: NQLLLLYYSCITLSKWQPPLSSS*RNRGLL
Trigger: CAACAGCCCTCTGTTCCGGCAGGAAGATGACAGAGG...AGGTTGCCATTTGCTCAAGGTTATACAGCTATAATAAAGCAGTAGAAGCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534628.1
CDS-3UTR GCA 90 bp TCTGTTAACCTGTCTGTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCATGAGTCTACCATGGTaGCATGTGACCCCTAGGTCA +
Preference number: 4 (lower is better)
Translates to: SVNLSVTAICIYGNWVLSMSLPW*HVTPRS
Trigger: TGACCTAGGGGTCACATGGCACCATGGTAGACTCAT...GCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTTAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR GCA 90 bp TGTAGTCCTCTCTACATGCCTGTAGATTATAGGCCACCCTTCTGCTTTCCTCTTATCTGCTCACACTCTTaGTTGGTCCCACATTCAAAC +
Preference number: 4 (lower is better)
Translates to: CSPLYMPVDYRPPFCFPLICSHS*LVPHSN
Trigger: GTTTGAATGTGGGACCAAGCAAGAGTGTGAGCAGAT...AAGAGGAAAGCAGAAGGGTGGCCTATAATCTACAGGCATGTAGAGAGGACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACATCTGCTCACACTCTTaGTTGGTCCCACATTCAAAC +
Preference number: 4 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNICSHS*LVPHSN
Trigger: GTTTGAATGTGGGACCAAGCAAGAGTGTGAGCAGAT...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR GCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGCAACTCCTAGTTCAGTaGTCTTTCCACTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLQLLVQ*SFHCSS
Trigger: GCTACTGCAGTGGAAAGAGCACTGAACTAGGAGTTG...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR GCA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGGGTATTATACATCTCTaGGTCACAGTGGCACAGACC +
Preference number: 4 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRGIIHL*VTVAQT
Trigger: GGTCTGTGCCACTGTGACGCAGAGATGTATAATACC...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp AGGCAGGGGGAAGAAGTAAGAGGAGGGCAATTTAGAGATGGACCTCTTATGAGTCAATCTACAAAGGGATaGAACATCCTTCTCCCTACA +
Preference number: 4 (lower is better)
Translates to: RQGEEVRGGQFRDGPLMSQSTKG*NILLPT
Trigger: TGTAGGGAGAAGGATGTTGCATCCCTTTGTAGATTG...ACTCATAAGAGGTCCATCTCTAAATTGCCCTCCTCTTACTTCTTCCCCCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp AACCAGCTTCTACTGCTTTATTATAGCTGTATAACCTTGAGCAAATGGCAACCTGTCACCTGTACCAACTaGCCAATCCTCAACCCTCGC +
Preference number: 4 (lower is better)
Translates to: NQLLLLYYSCITLSKWQPVTCTN*PILNPR
Trigger: GCGAGGGTTGAGGATTGGGCAGTTGGTACAGGTGAC...AGGTTGCCATTTGCTCAAGGTTATACAGCTATAATAAAGCAGTAGAAGCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534628.1
CDS-3UTR CCA 90 bp TTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCTTTGTTGGTCATCTGCTAATGAGTCTACCATaGTGCCATGTGACCCCTAGG +
Preference number: 4 (lower is better)
Translates to: LGNWHRVRVSIAVFVGHLLMSLP*CHVTPR
Trigger: CCTAGGGGTCACATGGCACCATGGTAGACTCATTAG...CAGATGACCAACAAAGACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp GTCTGTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCCAATTAATTGCGAGAGCTCTGCTGAATaGTGGGTGCATCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: VCNCHLHLWKLGPKPINCESSAE*WVHLCC
Trigger: GCAGCAAAGATGCACCCACCATTCAGCAGAGCTCTC...GCAATTAATTGGCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR CCA 90 bp AGATCTGGGGGTCTAGAGATCTTCCTAATGGTGAAGATCTTCTCACAGGTAAAGCCTGATTCTGAGATCTaGGGGTCTAGAGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: RSGGLEIFLMVKIFSQVKPDSEI*GSRDLP
Trigger: AGGAAGATCTCTAGACCCCCAGATCTCAGAATCAGG...CTTTACCTGTGAGAAGATCTTCACCATTAGGAAGATCTCTAGACCCCCAGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCAAGAGGTCCAGAGCATTaGCTACTCTCCTTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPRGPEH*LLSLQN
Trigger: ATTTTGCAAGGAGAGTAGCCAATGCTCTGGACCTCT...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531509.5
3UTR CAA 72 bp GACACAGTCAGAACACATCAAGCCTCAGAATCTCCCTaGGAGGCCTGGAAAACTAGTAACTATAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: DTVRTHQASESP*EAWKTSNYRKP
Trigger: GGGTTTTCTATAGTTACTAGTTTTCCAGGCCTCCAAGGGAGATTCTGAGGCTTGATGTGTTCTGACTGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp TTCTGCCTGTTACCAAGTTCCAAAGTAGTTTCCACATTTTTGGGTATCTTTTCGCATCCTGACTGTAGATaGAGCAAAGGCGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: FCLLPSSKVVSTFLGIFSHPDCR*SKGGQH
Trigger: ATGCTGCCCGCCTTTGCTTCATCTACAGTCAGGATG...CGAAAAGATACCCAAAAATGTGGAAACTACTTTGGAACTTGGTAACAGGCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529024.1
CDS-3UTR TCA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTTTTTCTTACTATTCCTaGGATAAGAACACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTFSYYS*DKNTGL
Trigger: CAGGCCTGTGTTCTTATCTCAGGAATAGTAAGAAAA...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACAAAATACCAGTGAAGTaGGAACCCCAAATCAAGGCT +
Preference number: 4 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNKIPVK*EPQIKA
Trigger: AGCCTTGATTTGGGGTTCTCACTTCACTGGTATTTT...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR GCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGACTGATCATGAAGCATaGAGGCACTATGCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLTDHEA*RHYACP
Trigger: AGGACAAGCATAGTGCCTGCATGCTTCATGATCAGT...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR GCA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACTTTCTCTTCCTAAGGTaGCAGGACTCTTCTTCTGAT +
Preference number: 4 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNFLFLR*QDSSSD
Trigger: ATCAGAAGAAGAGTCCTGGCACCTTAGGAAGAGAAA...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp AACCAGCTTCTACTGCTTTATTATAGCTGTATAACCTTGAGCAAATGGCAACCTTATGTAGAGCAGGGCTaGGATCCGGTAGGTAATCCC +
Preference number: 4 (lower is better)
Translates to: NQLLLLYYSCITLSKWQPYVEQG*DPVGNP
Trigger: GGGATTACCTACCGGATCCCAGCCCTGCTCTACATA...AGGTTGCCATTTGCTCAAGGTTATACAGCTATAATAAAGCAGTAGAAGCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534628.1
CDS-3UTR CCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTCAGAGAATGAGGCCTaGTTTTACATGGTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLSENEA*FYMVAG
Trigger: TCCAGCTACCATGTAAAACCAGGCCTCATTCTCTGA...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGGCTCACACTCTTGCTTaGTCCCACATTCAAACAAAC +
Preference number: 4 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLAHTLA*SHIQTN
Trigger: GTTTGTTTGAATGTGGGACCAAGCAAGAGTGTGAGC...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CCA 90 bp TCTACTGTAACCATGGGCCTAATGAGTCTACCATGGTGCCATGTGACCCCTAGGTGCATCTATGGAAATTaGGTCCTAAGCCAATTAATT +
Preference number: 4 (lower is better)
Translates to: STVTMGLMSLPWCHVTPRCIYGN*VLSQLI
Trigger: AATTAATTGGCTTAGGACCCAATTTCCATAGATGCA...CCTAGGGGTCACATGGCACCATGGTAGACTCATTAGGCCCATGGTTACAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR CCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCATGCCATTTGCATCTATaGAAATTGGGTCCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPCHLHL*KLGPKP
Trigger: TGGCTTAGGACCCAATTTCCATAGATGCAAATGGCA...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CCA 90 bp GGAGGGCAATTTAGAGATGGACCTCTTATGAGTACTGGTATTATACATCTCTGCCCAGACTGTGAATTCTaGCACTGCAGAGACAAGATG +
Preference number: 4 (lower is better)
Translates to: GGQFRDGPLMSTGIIHLCPDCEF*HCRDKM
Trigger: CATCTTGTCTCTGCAGTGCCAGAATTCACAGTCTGG...GCAGAGATGTATAATACCAGTACTCATAAGAGGTCCATCTCTAAATTGCCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR CAA 72 bp TTGTACGACTTGGCCATCCTCCCTATTCCTATCCACTaGCAGTACAGTGTTCAGGAAAGCTTTGCTAAACAA +
Preference number: 4 (lower is better)
Translates to: LYDLAILPIPIH*QYSVQESFAKQ
Trigger: TTGTTTAGCAAAGCTTTCCTGAACACTGTACTGCAAGTGGATAGGAATAGGGAGGATGGCCAAGTCGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
3UTR CAA 72 bp ACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATaGAGGGTGAGTGTTCAGCAGGTTTTGAATGCTACA +
Preference number: 4 (lower is better)
Translates to: TDLEAGQNREYT*RVSVQQVLNAT
Trigger: TGTAGCATTCAAAACCTGCTGAACACTCACCCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGGAGAGCCTACAGAACTaGGCATTATTAAAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLESLQN*ALLKGC
Trigger: ACACCCTTTTAATAATGCTCAGTTCTGTAGGCTCTC...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp TCTGTTAACCTGTCTGTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCCAGTACTACTGGCATTaGGATTCTCATTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SVNLSVTAICIYGNWVLSQYYWH*DSHCSP
Trigger: GGGAGAACAATGAGAATCTCAATGCCAGTAGTACTG...GCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTTAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGAACCACCCTAATAAATaGACTTCAGCCCATCATCAG +
Preference number: 4 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRNHPNK*TSAHHQ
Trigger: CTGATGATGGGCTGAAGTTCATTTATTAGGGTGGTT...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp TTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCTTTGTTGGTCATCTGCTGAGAGACTCAGCATaGACTAAGTTCAGCACGAAA +
Preference number: 4 (lower is better)
Translates to: LGNWHRVRVSIAVFVGHLLRDSA*TKFSTK
Trigger: TTTCGTGCTGAACTTAGTTCATGCTGAGTCTCTCAG...CAGATGACCAACAAAGACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp GAAGCAGGCCAGAACAGAGAATATACATTGAGGGTGAGTGTTCAGCAGGTTTTGGTTTTACATGGTAGCTaGAAGCAAAAGAACCAGGAA +
Preference number: 4 (lower is better)
Translates to: EAGQNREYTLRVSVQQVLVLHGS*KQKNQE
Trigger: TTCCTGGTTCTTTTGCTTCCAGCTACCATGTAAAAC...CAAAACCTGCTGAACACTCACCCTCAATGTATATTCTCTGTTCTGGCCTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCAGTTTTACATGGTAGCTaGAAGCAAAAGAACCAGGAA +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPVLHGS*KQKNQE
Trigger: TTCCTGGTTCTTTTGCTTCCAGCTACCATGTAAAAC...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CCA 90 bp GGAGGGCAATTTAGAGATGGACCTCTTATGAGTACTGGTATTATACATCTCTGCGCTCACACTCTTGCTTaGTCCCACATTCAAACAAAC +
Preference number: 4 (lower is better)
Translates to: GGQFRDGPLMSTGIIHLCAHTLA*SHIQTN
Trigger: GTTTGTTTGAATGTGGGACCAAGCAAGAGTGTGAGC...GCAGAGATGTATAATACCAGTACTCATAAGAGGTCCATCTCTAAATTGCCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp GAAGCAGGCCAGAACAGAGAATATACATTGAGGGTGAGTGTTCAGCAGGTTTTGTCTTTGTTGGTCATCTaGAACTTGGACAAGTTAAGC +
Preference number: 4 (lower is better)
Translates to: EAGQNREYTLRVSVQQVLSLLVI*NLDKLS
Trigger: GCTTAACTTGTCCAAGTTCCAGATGACCAACAAAGA...CAAAACCTGCTGAACACTCACCCTCAATGTATATTCTCTGTTCTGGCCTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp AGATCTGGGGGTCTAGAGATCTTCCTAATGGTGAAGATCTTCTCACAGGTAAAGAGTACAGAGTATTTCTaGCACTCAGCATCACAAAGC +
Preference number: 4 (lower is better)
Translates to: RSGGLEIFLMVKIFSQVKSTEYF*HSASQS
Trigger: GCTTTGTGATGCTGAGTGCCAGAAATACTCTGTACT...CTTTACCTGTGAGAAGATCTTCACCATTAGGAAGATCTCTAGACCCCCAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp AACCAGCTTCTACTGCTTTATTATAGCTGTATAACCTTGAGCAAATGGCAACCTGCCCAGACTCAGATCTaGGATGAAGAGTCACCTGTA +
Preference number: 4 (lower is better)
Translates to: NQLLLLYYSCITLSKWQPAQTQI*DEESPV
Trigger: TACAGGTGACTCTTCATCCCAGATCTGAGTCTGGGC...AGGTTGCCATTTGCTCAAGGTTATACAGCTATAATAAAGCAGTAGAAGCTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534628.1
3UTR CAA 72 bp AAGTCATGTGAAAAGGTAAGTCCCCTGGTTTCCATTTaGACATCAGAGTCCTTTATGCAGCCAGGACTTACT +
Preference number: 4 (lower is better)
Translates to: KSCEKVSPLVSI*TSESFMQPGLT
Trigger: AGTAAGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACCTTTTCACATGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR TCA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACCTAGGCTATATTTCATaGCTAAGACTTGTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNLGYIS*LRLVLC
Trigger: ACAGAGAACAAGTCTTAGTCATGAAATATAGCCTAG...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGGAGATGGACCTCTTATaGGTACTGGTATTATACATC +
Preference number: 4 (lower is better)
Translates to: GSSVTDLEAGQNREYTLREMDLL*VLVLYI
Trigger: GATGTATAATACCAGTACTCATAAGAGGTCCATCTC...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp AACCAGCTTCTACTGCTTTATTATAGCTGTATAACCTTGAGCAAATGGCAACCTTTTGTGAAGAGAAACTaGGGCCCAGACTCAGATCTG +
Preference number: 4 (lower is better)
Translates to: NQLLLLYYSCITLSKWQPFVKRN*GPDSDL
Trigger: CAGATCTGAGTCTGGGCCTCAGTTTCTCTTCACAAA...AGGTTGCCATTTGCTCAAGGTTATACAGCTATAATAAAGCAGTAGAAGCTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534628.1
CDS-3UTR TCA 90 bp AACCAGCTTCTACTGCTTTATTATAGCTGTATAACCTTGAGCAAATGGCAACCTAAAAGGCACAGATCCTaGAGAGCTCTGAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: NQLLLLYYSCITLSKWQPKRHRS*RALSFV
Trigger: CACAAAGCTCAGAGCTCTTCAGGATCTGTGCCTTTT...AGGTTGCCATTTGCTCAAGGTTATACAGCTATAATAAAGCAGTAGAAGCTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534628.1
CDS-3UTR GCA 90 bp TTTTTCTCTCTTCTTCTGAGCCCTCCAAACTGTTCCAACTTCTGCCTGTTACCAAACTGTTCCAACTTCTaGCTGTTACCAAGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: FFSLLLSPPNCSNFCLLPNCSNF*LLPSSK
Trigger: TTTGGAACTTGGTAACAGGCAGAAGTTGGAACAGTT...TGGTAACAGGCAGAAGTTGGAACAGTTTGGAGGGCTCAGAAGAAGAGAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529024.1
CDS-3UTR CCA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACACCTCTTATGAGTACTaGTATTATACATCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNTSYEY*YYTSLR
Trigger: ACGCAGAGATGTATAATACCAGTACTCATAAGAGGT...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp TTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCTTTGTTGGTCATCTGCTCAAGTCTTTATTCTaGATTTCCCCTGTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: LGNWHRVRVSIAVFVGHLLKSLF*ISPVPN
Trigger: GTTGGGAACAGGGGAAATCCAGAATAAAGACTTGAG...CAGATGACCAACAAAGACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGTCCTATCAATCTGAGTaGCTGAAATGGGTTCAGTTA +
Preference number: 4 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRSYQSE*LKWVQL
Trigger: TAACTGAACCCATTTCAGCCACTCAGATTGATAGGA...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CCA 90 bp GGAGGGCAATTTAGAGATGGACCTCTTATGAGTACTGGTATTATACATCTCTGCTCCAGAGGCCAAGGATaGTTGACTCATTCATTCATT +
Preference number: 4 (lower is better)
Translates to: GGQFRDGPLMSTGIIHLCSRGQG*LTHSFI
Trigger: AATGAATGAATGAGTCAACCATCCTTGGCCTCTGGA...GCAGAGATGTATAATACCAGTACTCATAAGAGGTCCATCTCTAAATTGCCCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp TTCTGCCTGTTACCAAGTTCCAAAGTAGTTTCCACATTTTTGGGTATCTTTTCGTTTTCTCTCTTCTTCTaGGCCCTCCAAACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: FCLLPSSKVVSTFLGIFSFSLFF*ALQTVP
Trigger: TGGAACAGTTTGGAGGGCTCAGAAGAAGAGAGAAAA...CGAAAAGATACCCAAAAATGTGGAAACTACTTTGGAACTTGGTAACAGGCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529024.1
CDS-3UTR CCA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCATGCATCTATGGAAATTaGGTCCTAAGCCAATTAATT +
Preference number: 4 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPCIYGN*VLSQLI
Trigger: AATTAATTGGCTTAGGACCCAATTTCCATAGATGCA...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CCA 90 bp AGATCTGGGGGTCTAGAGATCTTCCTAATGGTGAAGATCTTCTCACAGGTAAAGAAGACTTGTTCTCTGTaGTCATTGTACAACACCAAA +
Preference number: 4 (lower is better)
Translates to: RSGGLEIFLMVKIFSQVKKTCSL*SLYNTK
Trigger: TTTGGTGTTGTACAATGACCACAGAGAACAAGTCTT...CTTTACCTGTGAGAAGATCTTCACCATTAGGAAGATCTCTAGACCCCCAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp AACCAGCTTCTACTGCTTTATTATAGCTGTATAACCTTGAGCAAATGGCAACCTACAATAAGCACTCAGTaGGAGCCATTGTTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: NQLLLLYYSCITLSKWQPTISTQ*EPLFLL
Trigger: CAGCAAAAACAATGGCTCTCACTGAGTGCTTATTGT...AGGTTGCCATTTGCTCAAGGTTATACAGCTATAATAAAGCAGTAGAAGCTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534628.1
CDS-3UTR CCA 90 bp GTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCCAATTAATTGCTTTTGCTCACACTCTTGCTTaGTCCCACATTCAAACAAAC +
Preference number: 4 (lower is better)
Translates to: VTAICIYGNWVLSQLIAFAHTLA*SHIQTN
Trigger: GTTTGTTTGAATGTGGGACCAAGCAAGAGTGTGAGC...AAAAGCAATTAATTGGCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR CCA 90 bp AGATCTGGGGGTCTAGAGATCTTCCTAATGGTGAAGATCTTCTCACAGGTAAAGTGCAATAACAGGCTATaGGAGAAACAATCTAAGATA +
Preference number: 4 (lower is better)
Translates to: RSGGLEIFLMVKIFSQVKCNNRL*EKQSKI
Trigger: TATCTTAGATTGTTTCTCCCATAGCCTGTTATTGCA...CTTTACCTGTGAGAAGATCTTCACCATTAGGAAGATCTCTAGACCCCCAGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR TCA 90 bp AACCAGCTTCTACTGCTTTATTATAGCTGTATAACCTTGAGCAAATGGCAACCTTCTGTAAAATATGACTaGAAACAGTACCTACGACAC +
Preference number: 4 (lower is better)
Translates to: NQLLLLYYSCITLSKWQPSVKYD*KQYLRH
Trigger: GTGTCGTAGGTACTGTTTTCAGTCATATTTTACAGA...AGGTTGCCATTTGCTCAAGGTTATACAGCTATAATAAAGCAGTAGAAGCTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534628.1
CDS-3UTR TCA 90 bp AACCAGCTTCTACTGCTTTATTATAGCTGTATAACCTTGAGCAAATGGCAACCTCTTGTCTGTAAAATATaGCTGAAAACAGTACCTACG +
Preference number: 4 (lower is better)
Translates to: NQLLLLYYSCITLSKWQPLVCKI*LKTVPT
Trigger: CGTAGGTACTGTTTTCAGTCATATTTTACAGACAAG...AGGTTGCCATTTGCTCAAGGTTATACAGCTATAATAAAGCAGTAGAAGCTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534628.1
CDS CCA 90 bp ACGGCCGCCTCCTCTCTTCAGTGCCACAGCCCCGAGCTCTTATATTaGTCTGTAGCTCGGTATCACCGCCTAAAGCTTCCCTGGACAGCC +
Preference number: 5 (lower is better)
Translates to: TAASSLQCHSPELLY*SVARYHRLKLPWTA
Trigger: GGCTGTCCAGGGAAGCTTTAGGCGGTGATACCGAGCTACAGACCAATATAAGAGCTCGGGGCTGTGGCACTGAAGAGAGGAGGCGGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531509.5
CDS-3UTR CAA 90 bp GTCCTGGCACCTATGTGGGATCTCCAGGGGCCGGAAACTTACCACACTCCCTTGACTTACCACACTCCCTaGGCAACCATGTGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: VLAPMWDLQGPETYHTPLTYHTP*ATMWGL
Trigger: GAGCCCCCACATGGTTGCCAAGGGAGTGTGGTAAGT...CAAGGGAGTGTGGTAAGTTTCCGGCCCCTGGAGATCCCACATAGGTGCCAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR CAA 90 bp TTGGTGTCCGGGCACTGCAATATAGCACAGGGTGGCCAGCCCTCCCAGTCACCTATGGTGGGTGCATCTTaGCTGCTAGAGTCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: LVSGHCNIAQGGQPSQSPMVGAS*LLESWH
Trigger: GTGCCAGGACTCTAGCAGCAAAGATGCACCCACCAT...AGGTGACTGGGAGGGCTGGCCACCCTGTGCTATATTGCAGTGCCCGGACACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS GCA 90 bp AAGGCTGGGGAGACTCAGTTCCCAACGGCCGCCTCCTCTCTTCAGTaGCACAGCCCCGAGCTCTTATATTGGTCTGTAGCTCGGTATCAC +
Preference number: 5 (lower is better)
Translates to: KAGETQFPTAASSLQ*HSPELLYWSVARYH
Trigger: GTGATACCGAGCTACAGACCAATATAAGAGCTCGGGGCTGTGGCACTGAAGAGAGGAGGCGGCCGTTGGGAACTGAGTCTCCCCAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531509.5
CDS CCA 90 bp GGAACACACAACCACTCTTCTGCTCCCATACAGGACAGGGGTTCATaGTCCGATGCCCCGGTAGTGTGGCTTCCATCAGTGGCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: GTHNHSSAPIQDRGS*SDAPVVWLPSVASG
Trigger: CCCTGAAGCCACTGATGGAAGCCACACTACCGGGGCATCGGACCATGAACCCCTGTCCTGTATGGGAGCAGAAGAGTGGTTGTGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294064.9
ENST00000529024.1
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CAA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACTGCCCGGCACCTGTTaGGTGTCCGGGCACTGCAAT +
Preference number: 5 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGLPGTC*VSGHCN
Trigger: ATTGCAGTGCCCGGACACCAAACAGGTGCCGGGCAG...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CAA 90 bp GCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACAAAGCCTGGACAAGCCTaGGACAGACGACTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: AKCRPVQVSLPSHRFQGTKPGQA*DRRLQA
Trigger: TGCCTGGAGTCGTCTGTCCAAGGCTTGTCCAGGCTT...TGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS TCA 90 bp CTGGGCCCACAGCAAATGTGGCCCAGTGCTTCAGCTCTGAGCCAATaGCCTCCTCAGTCAAGTCCCTCACCTCACTCCATGAACATCCAG +
Preference number: 5 (lower is better)
Translates to: LGPQQMWPSASALSQ*PPQSSPSPHSMNIQ
Trigger: CTGGATGTTCATGGAGTGAGGTGAGGGACTTGACTGAGGAGGTCATTGGCTCAGAGCTGAAGCACTGGGCCACATTTGCTGTGGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CAA 90 bp GCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACACCCTGGTTGTACGACTaGGCCATCCTCCCTATTCCT +
Preference number: 5 (lower is better)
Translates to: AKCRPVQVSLPSHRFQGTPWLYD*AILPIP
Trigger: AGGAATAGGGAGGATGGCCAAGTCGTACAACCAGGG...TGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp GCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACAAGGGCCCTGAAGGCCTaGGGTAATTGGCACAGAGTT +
Preference number: 5 (lower is better)
Translates to: AKCRPVQVSLPSHRFQGTRALKA*GNWHRV
Trigger: AACTCTGTGCCAATTACCCAAGGCCTTCAGGGCCCT...TGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp ATACATCTCTGCGTCACAGTGGCACAGACCAAGGTCCCTGCCTTGACTCCCTTCCCTGCACTCTCAGTGTaGGGCCATGTGTGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: IHLCVTVAQTKVPALTPFPALSV*GHVCWK
Trigger: CTTCCAGCACACATGGCCCAACACTGAGAGTGCAGG...GAAGGGAGTCAAGGCAGGGACCTTGGTCTGTGCCACTGTGACGCAGAGATGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS TCA 90 bp TGGTCTGTAGCTCGGTATCACCGCCTAAAGCTTCCCTGGACAGCCTaGGAGTTGAGCAAAGGTTCCCGGCCTCAGAGGGTACCCTACAAA +
Preference number: 5 (lower is better)
Translates to: WSVARYHRLKLPWTA*ELSKGSRPQRVPYK
Trigger: TTTGTAGGGTACCCTCTGAGGCCGGGAACCTTTGCTCAACTCTCAGGCTGTCCAGGGAAGCTTTAGGCGGTGATACCGAGCTACAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531509.5
CDS-3UTR CAA 90 bp GCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACAACCAAGGTCCCTGCCTaGACTCCCTTCTTGAGTAGT +
Preference number: 5 (lower is better)
Translates to: AKCRPVQVSLPSHRFQGTTKVPA*TPFLSS
Trigger: ACTACTCAAGAAGGGAGTCAAGGCAGGGACCTTGGT...TGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS TCA 90 bp AGCATCCTGACTGTAGATGAAGCAAAGGCGGGCAGCATTCCTGCCTaGCACAATCTGTTGACGCTCTGTGACATGGCCCCGCACACAGAT +
Preference number: 5 (lower is better)
Translates to: SILTVDEAKAGSIPA*HNLLTLCDMAPHTD
Trigger: ATCTGTGTGCGGGGCCATGTCACAGAGCGTCAACAGATTGTGTCAGGCAGGAATGCTGCCCGCCTTTGCTTCATCTACAGTCAGGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294064.9
ENST00000529024.1
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CAA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTCTGCCCGGCACCTGTTaGGTGTCCGGGCACTGCAAT +
Preference number: 5 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTLPGTC*VSGHCN
Trigger: ATTGCAGTGCCCGGACACCAAACAGGTGCCGGGCAG...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CAA 90 bp AGGGCCCTGAAGGCCTTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCATGGTGGGTGCATCTTaGCTGCTAGAGTCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: RALKALGNWHRVRVSIAVMVGAS*LLESWH
Trigger: GTGCCAGGACTCTAGCAGCAAAGATGCACCCACCAT...GACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAAGGCCTTCAGGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp AGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCTCTGTTTCCTACTGGTaGGGTGTGAGTACAAGAGCC +
Preference number: 5 (lower is better)
Translates to: SSGDTSKVQKQASGRARTSVSYW*GVSTRA
Trigger: GGCTCTTGTACTCACACCCAACCAGTAGGAAACAGA...GGTCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CAA 90 bp GGATCTCCAGGGGCCGGAAACTTACCACACTCCCTTGGCAACCATGTGGGGGCTGTCTGTAACTGCCATTaGCATCTATGGAAATTGGGT +
Preference number: 5 (lower is better)
Translates to: GSPGAGNLPHSLGNHVGAVCNCH*HLWKLG
Trigger: ACCCAATTTCCATAGATGCAAATGGCAGTTACAGAC...AGCCCCCACATGGTTGCCAAGGGAGTGTGGTAAGTTTCCGGCCCCTGGAGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS TCA 90 bp AGTCCCTCACCTCACTCCATGAACATCCAGCATCCTGACTGTAGATaGAGCAAAGGCGGGCAGCATTCCTGCCTGACACAATCTGTTGAC +
Preference number: 5 (lower is better)
Translates to: SPSPHSMNIQHPDCR*SKGGQHSCLTQSVD
Trigger: GTCAACAGATTGTGTCAGGCAGGAATGCTGCCCGCCTTTGCTTCATCTACAGTCAGGATGCTGGATGTTCATGGAGTGAGGTGAGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CAA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGAAAACTGGTGAACTCCTaGAGGGCAAAGACTGTGGGA +
Preference number: 5 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGKLVNS*RAKTVG
Trigger: TCCCACAGTCTTTGCCCTCAAGGAGTTCACCAGTTT...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS TCA 90 bp TCAGGGTTCTCTCACTCCATGAACATCCAGCATCCTGACTGTAGATaGAGCAAAGGCGGGCAGCATTCCTGCCTGACACAATCTGTTGAC +
Preference number: 5 (lower is better)
Translates to: SGFSHSMNIQHPDCR*SKGGQHSCLTQSVD
Trigger: GTCAACAGATTGTGTCAGGCAGGAATGCTGCCCGCCTTTGCTTCATCTACAGTCAGGATGCTGGATGTTCATGGAGTGAGAGAACCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529024.1
CDS-3UTR CAA 90 bp GAAGCCTGGACAAGCCTTGGACAGACGACTCCAGGCATATTGAAGATGCAACTACGGAACAGAGGGCTGTaGAAGGAGCATGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: EAWTSLGQTTPGILKMQLRNRGL*KEHVVT
Trigger: AGTGACAACATGCTCCTTCAACAGCCCTCTGTTCCG...TAGTTGCATCTTCAATATGCCTGGAGTCGTCTGTCCAAGGCTTGTCCAGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACACTTACCACACTCCCTaGGCAACCATGTGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNTYHTP*ATMWGL
Trigger: GAGCCCCCACATGGTTGCCAAGGGAGTGTGGTAAGT...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CAA 90 bp ATACATCTCTGCGTCACAGTGGCACAGACCAAGGTCCCTGCCTTGACTCCCTTCAGAGGCCAAGGATGGTaGACTCATTCATTCATTCAG +
Preference number: 5 (lower is better)
Translates to: IHLCVTVAQTKVPALTPFRGQGW*THSFIQ
Trigger: CTGAATGAATGAATGAGTCAACCATCCTTGGCCTCT...GAAGGGAGTCAAGGCAGGGACCTTGGTCTGTGCCACTGTGACGCAGAGATGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTCGGAACAGAGGGCTGTaGAAGGAGCATGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTRNRGL*KEHVVT
Trigger: AGTGACAACATGCTCCTTCAACAGCCCTCTGTTCCG...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CAA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACATGGTGGGTGCATCTTaGCTGCTAGAGTCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNMVGAS*LLESWH
Trigger: GTGCCAGGACTCTAGCAGCAAAGATGCACCCACCAT...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CAA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGACCAGTACTACTGGCATaGAGATTCTCATTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGPVLLA*RFSLFS
Trigger: GGAGAACAATGAGAATCTCAATGCCAGTAGTACTGG...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGAATTGGGAAGATTACCTaGGCAAATGTAGGAGAGGCT +
Preference number: 5 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGIGKIT*ANVGEA
Trigger: AGCCTCTCCTACATTTGCCAAGGTAATCTTCCCAAT...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp AGGCAGGGGGAAGAAGTAAGAGGAGGGCAATTTAGAGATGGACCTCTTATGAGTGCCTCAGAATCTCCCTaGGAGGCCTGGAAAACTAGT +
Preference number: 5 (lower is better)
Translates to: RQGEEVRGGQFRDGPLMSASESP*EAWKTS
Trigger: ACTAGTTTTCCAGGCCTCCAAGGGAGATTCTGAGGC...ACTCATAAGAGGTCCATCTCTAAATTGCCCTCCTCTTACTTCTTCCCCCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp TCTGTTAACCTGTCTGTAACTGCCATTTGCATCTATGGAAATTGGGTCCTAAGCACTTACCACACTCCCTaGGCAACCATGTGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: SVNLSVTAICIYGNWVLSTYHTP*ATMWGL
Trigger: GAGCCCCCACATGGTTGCCAAGGGAGTGTGGTAAGT...GCTTAGGACCCAATTTCCATAGATGCAAATGGCAGTTACAGACAGGTTAACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CAA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGCCTCCACCTGCCAACTaGACAGAGGTTTTCCCTGAC +
Preference number: 5 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRPPPAN*TEVFPD
Trigger: GTCAGGGAAAACCTCTGTCAAGTTGGCAGGTGGAGG...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTCAGAGGTCCAGAGCATaGGCTACTCTCCTTGCAAAA +
Preference number: 5 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTQRSRA*ATLLAK
Trigger: TTTTGCAAGGAGAGTAGCCAATGCTCTGGACCTCTG...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531509.5
CDS-3UTR CAA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCATCTGTTTCCTACTGGTaGGGTGTGAGTACAAGAGCC +
Preference number: 5 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPSVSYW*GVSTRA
Trigger: GGCTCTTGTACTCACACCCAACCAGTAGGAAACAGA...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CAA 90 bp AGGGCCCTGAAGGCCTTGGGTAATTGGCACAGAGTTAGAGTGTCTATAGCTGTCTTAATTGCTTTTGAATaGGCTTGGGTTCCTACCAGG +
Preference number: 5 (lower is better)
Translates to: RALKALGNWHRVRVSIAVLIAFE*AWVPTR
Trigger: CCTGGTAGGAACCCAAGCCAATTCAAAAGCAATTAA...GACAGCTATAGACACTCTAACTCTGTGCCAATTACCCAAGGCCTTCAGGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp TCTACTGTAACCATGGGCCTAATGAGTCTACCATGGTGCCATGTGACCCCTAGGTTAATTGCTTTTGAATaGGCTTGGGTTCCTACCAGG +
Preference number: 5 (lower is better)
Translates to: STVTMGLMSLPWCHVTPRLIAFE*AWVPTR
Trigger: CCTGGTAGGAACCCAAGCCAATTCAAAAGCAATTAA...CCTAGGGGTCACATGGCACCATGGTAGACTCATTAGGCCCATGGTTACAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR CAA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCAGTAGTCCTAAAGAAGTaGATATTCTCGGCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPVVLKK*IFSAGR
Trigger: GCGCCCAGCCGAGAATATCAACTTCTTTAGGACTAC...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp AGAGTTCAGGTGACACATCCAAGGTCCAAAAGCAAGCCAGTGGCAGAGCCAGGAAGTGTTCAGCAGGTTTaGAATGCTACACAATCTACA +
Preference number: 5 (lower is better)
Translates to: RVQVTHPRSKSKPVAEPGSVQQV*NATQST
Trigger: TGTAGATTGTGTAGCATTCAAAACCTGCTGAACACT...TCCTGGCTCTGCCACTGGCTTGCTTTTGGACCTTGGATGTGTCACCTGAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCACCCCGAGCTCTTATATaGGTCTGTAGCTCGGTATCA +
Preference number: 5 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPPRALI*VCSSVS
Trigger: TGATACCGAGCTACAGACCAATATAAGAGCTCGGGG...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531509.5
CDS-3UTR CAA 90 bp GAATTCTGGCACTGCAGAGACAAGATGCATGGCCTACTGAAGAGGTGGATTATGCCTATTCCTATCCACTaGCAGTACAGTGTTCAGGAA +
Preference number: 5 (lower is better)
Translates to: EFWHCRDKMHGLLKRWIMPIPIH*QYSVQE
Trigger: TTCCTGAACACTGTACTGCAAGTGGATAGGAATAGG...CATAATCCACCTCTTCAGTAGGCCATGCATCTTGTCTCTGCAGTGCCAGAATTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTTTGGTCATCTGGAACTaGGACAAGTTAAGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTLVIWN*DKLSQL
Trigger: AAGCTGGCTTAACTTGTCCAAGTTCCAGATGACCAA...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp TCTACTGTAACCATGGGCCTAATGAGTCTACCATGGTGCCATGTGACCCCTAGGTTGCATCTATGGAAATaGGGTCCTAAGCCAATTAAT +
Preference number: 5 (lower is better)
Translates to: STVTMGLMSLPWCHVTPRLHLWK*GPKPIN
Trigger: ATTAATTGGCTTAGGACCCAATTTCCATAGATGCAA...CCTAGGGGTCACATGGCACCATGGTAGACTCATTAGGCCCATGGTTACAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532963.1
CDS-3UTR CAA 90 bp CAGAGTCCTTTATGCAGCCAGGACTTACTGATCATGAAGCATGCAGGCACTATGGTCTGTAACTGCCATTaGCATCTATGGAAATTGGGT +
Preference number: 5 (lower is better)
Translates to: QSPLCSQDLLIMKHAGTMVCNCH*HLWKLG
Trigger: ACCCAATTTCCATAGATGCAAATGGCAGTTACAGAC...CATAGTGCCTGCATGCTTCATGATCAGTAAGTCCTGGCTGCATAAAGGACTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CAA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACCCCCTGGTTTCCATTTaGACATCAGAGTCCTTTATG +
Preference number: 5 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNPLVSI*TSESFM
Trigger: CATAAAGGACTCTGATGTCAAAATGGAAACCAGGGG...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CAA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCAGCCTTGACTCCCTTCTaGAGTAGTCCTAAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPALTPF*SSPKEV
Trigger: AACTTCTTTAGGACTACTCAAGAAGGGAGTCAAGGC...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp GAAGCAGGCCAGAACAGAGAATATACATTGAGGGTGAGTGTTCAGCAGGTTTTGAAATCAAGGCTTGGCTaGATTAGGCTGCTCACTCTT +
Preference number: 5 (lower is better)
Translates to: EAGQNREYTLRVSVQQVLKSRLG*IRLLTL
Trigger: AAGAGTGAGCAGCCTAATCAAGCCAAGCCTTGATTT...CAAAACCTGCTGAACACTCACCCTCAATGTATATTCTCTGTTCTGGCCTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp AACCAGCTTCTACTGCTTTATTATAGCTGTATAACCTTGAGCAAATGGCAACCTCGGAACAGAGGGCTGTaGAAGGAGCATGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: NQLLLLYYSCITLSKWQPRNRGL*KEHVVT
Trigger: AGTGACAACATGCTCCTTCAACAGCCCTCTGTTCCG...AGGTTGCCATTTGCTCAAGGTTATACAGCTATAATAAAGCAGTAGAAGCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534628.1
CDS-3UTR CAA 90 bp CTCTCATTTTACAGATGGAAACCTGAGGTCCAGAGAGTTCAGGTGACACATCCATTAATTGCTTTTGAATaGGCTTGGGTTCCTACCAGG +
Preference number: 5 (lower is better)
Translates to: LSFYRWKPEVQRVQVTHPLIAFE*AWVPTR
Trigger: CCTGGTAGGAACCCAAGCCAATTCAAAAGCAATTAA...TGGATGTGTCACCTGAACTCTCTGGACCTCAGGTTTCCATCTGTAAAATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS-3UTR CAA 90 bp GGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGTAACGTCTGTAACTGCCATTaGCATCTATGGAAATTGGGT +
Preference number: 5 (lower is better)
Translates to: GTNHTDLVFLPAMTPACNVCNCH*HLWKLG
Trigger: ACCCAATTTCCATAGATGCAAATGGCAGTTACAGAC...GTTACAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CAA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGCCCCTGGTTTCCATTTaGACATCAGAGTCCTTTATG +
Preference number: 5 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRPLVSI*TSESFM
Trigger: CATAAAGGACTCTGATGTCAAAATGGAAACCAGGGG...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTTTGCATCTATGGAAATaGGGTCCTAAGCCAATTAAT +
Preference number: 5 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTLHLWK*GPKPIN
Trigger: ATTAATTGGCTTAGGACCCAATTTCCATAGATGCAA...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294064.9
ENST00000531509.5
CDS-3UTR CAA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTGTGAATAATTGTGTATaGGGAAGATTACCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTVNNCV*GRLPWQ
Trigger: TTGCCAAGGTAATCTTCCCAATACACAATTATTCAC...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp GGTAAGTCCCCTGGTTTCCATTTTGACATCAGAGTCCTTTATGCAGCCAGGACTTTTACATACATAGATTaGTCACATAGCACTGAGTCC +
Preference number: 5 (lower is better)
Translates to: GKSPGFHFDIRVLYAARTFTYID*SHSTES
Trigger: GGACTCAGTGCTATGTGACAAATCTATGTATGTAAA...AGTCCTGGCTGCATAAAGGACTCTGATGTCAAAATGGAAACCAGGGGACTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531509.5
CDS-3UTR CAA 90 bp TGTAGTCCTCTCTACATGCCTGTAGATTATAGGCCACCCTTCTGCTTTCCTCTTTTGCATCTATGGAAATaGGGTCCTAAGCCAATTAAT +
Preference number: 5 (lower is better)
Translates to: CSPLYMPVDYRPPFCFPLLHLWK*GPKPIN
Trigger: ATTAATTGGCTTAGGACCCAATTTCCATAGATGCAA...AAGAGGAAAGCAGAAGGGTGGCCTATAATCTACAGGCATGTAGAGAGGACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp TGTAGTCCTCTCTACATGCCTGTAGATTATAGGCCACCCTTCTGCTTTCCTCTTGCATTGAGATTCTCATaGTTCTCCCTAGAAAATGAT +
Preference number: 5 (lower is better)
Translates to: CSPLYMPVDYRPPFCFPLALRFS*FSLEND
Trigger: ATCATTTTCTAGGGAGAACAATGAGAATCTCAATGC...AAGAGGAAAGCAGAAGGGTGGCCTATAATCTACAGGCATGTAGAGAGGACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp GGAAGTAGTGTAACTGACCTTGAAGCAGGCCAGAACAGAGAATATACATTGAGGGTGTTCAGGAAAGCTTaGCTAAACAAGGAGTTTCTA +
Preference number: 5 (lower is better)
Translates to: GSSVTDLEAGQNREYTLRVFRKA*LNKEFL
Trigger: TAGAAACTCCTTGTTTAGCAAAGCTTTCCTGAACAC...CCTCAATGTATATTCTCTGTTCTGGCCTGCTTCAAGGTCAGTTACACTACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp AAATGGAACAAATCATACAGATCTGGTCTTCCTTCCTGCCATGACACCTGCTTGCATGATTCTTCTGTTTaGCTCAATTCCTCTAGGATA +
Preference number: 5 (lower is better)
Translates to: KWNKSYRSGLPSCHDTCLHDSSV*LNSSRI
Trigger: TATCCTAGAGGAATTGAGCAAAACAGAAGAATCATG...CAAGCAGGTGTCATGGCAGGAAGGAAGACCAGATCTGTATGATTTGTTCCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294064.9
CDS-3UTR CAA 90 bp CCATTCAACAAGTCTCTAGGGAGTTCCAAACTTTTCCACATTTTTCTCTCTTCTGTAGTTTCCACATTTTaGGGTATCTTTTCGGCAATG +
Preference number: 5 (lower is better)
Translates to: PFNKSLGSSKLFHIFLSSVVSTF*GIFSAM
Trigger: CATTGCCGAAAAGATACCCAAAAATGTGGAAACTAC...AGAAGAGAGAAAAATGTGGAAAAGTTTGGAACTCCCTAGAGACTTGTTGAATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000529024.1
CDS CAA 90 bp AACGGCCGCCTCCTCTCTTCAGTGCCACAGCCCCGAGCTCTTATATaGGTCTGTAGCTCGGTATCACCGCCTAAAGCTTCCCTGGACAGC +
Preference number: 6 (lower is better)
Translates to: NGRLLSSVPQPRALI*VCSSVSPPKASLDS
Trigger: GCTGTCCAGGGAAGCTTTAGGCGGTGATACCGAGCTACAGACCAATATAAGAGCTCGGGGCTGTGGCACTGAAGAGAGGAGGCGGCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531509.5
CDS TCA 72 bp GCTCGGTATCACCGCCTAAAGCTTCCCTGGACAGCCTaGGAGTTGAGCAAAGGTTCCCGGCCTCAGAGGGTA +
Preference number: 6 (lower is better)
Translates to: ARYHRLKLPWTA*ELSKGSRPQRV
Trigger: TACCCTCTGAGGCCGGGAACCTTTGCTCAACTCTCAGGCTGTCCAGGGAAGCTTTAGGCGGTGATACCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531509.5
CDS GCA 72 bp TTCTGCTCCCATACAGGACAGGGGTTCATGGTCCGATaGCCCGGTAGTGTGGCTTCCATCAGTGGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: FCSHTGQGFMVR*PGSVASISGFR
Trigger: CCTGAAGCCACTGATGGAAGCCACACTACCGGGGCATCGGACCATGAACCCCTGTCCTGTATGGGAGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294064.9
ENST00000529024.1
ENST00000531509.5
ENST00000532963.1
CDS TCA 72 bp CAAAGGCGGGCAGCATTCCTGCCTGACACAATCTGTTaGCGCTCTGTGACATGGCCCCGCACACAGATGAAG +
Preference number: 6 (lower is better)
Translates to: QRRAAFLPDTIC*RSVTWPRTQMK
Trigger: CTTCATCTGTGTGCGGGGCCATGTCACAGAGCGTCAACAGATTGTGTCAGGCAGGAATGCTGCCCGCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294064.9
ENST00000529024.1
ENST00000531509.5
ENST00000532963.1
CDS GCA 72 bp GAGACTCAGTTCCCAACGGCCGCCTCCTCTCTTCAGTaGCACAGCCCCGAGCTCTTATATTGGTCTGTAGCT +
Preference number: 6 (lower is better)
Translates to: ETQFPTAASSLQ*HSPELLYWSVA
Trigger: AGCTACAGACCAATATAAGAGCTCGGGGCTGTGGCACTGAAGAGAGGAGGCGGCCGTTGGGAACTGAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531509.5
CDS TCA 72 bp ACTGTAGATGAAGCAAAGGCGGGCAGCATTCCTGCCTaGCACAATCTGTTGACGCTCTGTGACATGGCCCCG +
Preference number: 6 (lower is better)
Translates to: TVDEAKAGSIPA*HNLLTLCDMAP
Trigger: CGGGGCCATGTCACAGAGCGTCAACAGATTGTGTCAGGCAGGAATGCTGCCCGCCTTTGCTTCATCTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294064.9
ENST00000529024.1
ENST00000531509.5
ENST00000532963.1
CDS TCA 72 bp CAGCAAATGTGGCCCAGTGCTTCAGCTCTGAGCCAATaGCCTCCTCAGTCAAGTCCCTCACCTCACTCCATG +
Preference number: 6 (lower is better)
Translates to: QQMWPSASALSQ*PPQSSPSPHSM
Trigger: CATGGAGTGAGGTGAGGGACTTGACTGAGGAGGTCATTGGCTCAGAGCTGAAGCACTGGGCCACATTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS CCA 72 bp TCCTCTCTTCAGTGCCACAGCCCCGAGCTCTTATATTaGTCTGTAGCTCGGTATCACCGCCTAAAGCTTCCC +
Preference number: 6 (lower is better)
Translates to: SSLQCHSPELLY*SVARYHRLKLP
Trigger: GGGAAGCTTTAGGCGGTGATACCGAGCTACAGACCAATATAAGAGCTCGGGGCTGTGGCACTGAAGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531509.5
CDS CAA 72 bp CTCCTCTCTTCAGTGCCACAGCCCCGAGCTCTTATATaGGTCTGTAGCTCGGTATCACCGCCTAAAGCTTCC +
Preference number: 6 (lower is better)
Translates to: LLSSVPQPRALI*VCSSVSPPKAS
Trigger: GGAAGCTTTAGGCGGTGATACCGAGCTACAGACCAATATAAGAGCTCGGGGCTGTGGCACTGAAGAGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531509.5
CDS TCA 72 bp CCTCACTCCATGAACATCCAGCATCCTGACTGTAGATaGAGCAAAGGCGGGCAGCATTCCTGCCTGACACAA +
Preference number: 6 (lower is better)
Translates to: PHSMNIQHPDCR*SKGGQHSCLTQ
Trigger: TTGTGTCAGGCAGGAATGCTGCCCGCCTTTGCTTCATCTACAGTCAGGATGCTGGATGTTCATGGAGTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294064.9
ENST00000531509.5
ENST00000532963.1
CDS TCA 72 bp TCTCACTCCATGAACATCCAGCATCCTGACTGTAGATaGAGCAAAGGCGGGCAGCATTCCTGCCTGACACAA +
Preference number: 6 (lower is better)
Translates to: SHSMNIQHPDCR*SKGGQHSCLTQ
Trigger: TTGTGTCAGGCAGGAATGCTGCCCGCCTTTGCTTCATCTACAGTCAGGATGCTGGATGTTCATGGAGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529024.1