Pregenerated sensors for NETO1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000263958Ensembl transcript IDs: ENST00000578967.1, ENST00000580564.1, ENST00000664848.1
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCATGGCTGGGGAGGCCTCAGGAAATGTACAATCATGGCGGAAGGTaGAGAGGAAGCAAAGCACGCCTTACATACCAGCAGGAAGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: AWLGRPQEMYNHGGR*RGSKARLTYQQEGE Trigger: CTCTCCTTCCTGCTGGTATGTAAGGCGTGCTTTGCTTCCTCTTCACCTTCCGCCATGATTGTACATTTCCTGAGGCCTCCCCAGCCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578967.1 ENST00000664848.1 |
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| CDS GCA 90 bp | ATAACATGCCGGGGCACTGCTGTTCCAATAATCCCATCAATGGAATaGCTGCTCTATACAGGCAGGGAGTGGTCCACATCCAGAATCCAG | + |
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Preference number: 5 (lower is better) Translates to: ITCRGTAVPIIPSME*LLYTGREWSTSRIQ Trigger: CTGGATTCTGGATGTGGACCACTCCCTGCCTGTATAGAGCAGGCATTCCATTGATGGGATTATTGGAACAGCAGTGCCCCGGCATGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS TCA 90 bp | CACTATGTGATGGGTGAGGGAGACAAAACCCCAGCAGTCATTGTTTaGAGGTTGTTGGCACTTCTCCCTGCTGTGAGGCTGAGTAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: HYVMGEGDKTPAVIV*RLLALLPAVRLSKV Trigger: CACTTTACTCAGCCTCACAGCAGGGAGAAGTGCCAACAACCTTCAAACAATGACTGCTGGGGTTTTGTCTCCCTCACCCATCACATAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS TCA 90 bp | AGGAGAGCTCAGGGGAAACTGCCACGCTTAAACCATCAGATCTTGTaGGAACTCCCTCCCTATCATGAGAACAGCATCGGGAACATAATC | + |
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Preference number: 5 (lower is better) Translates to: RRAQGKLPRLNHQIL*ELPPYHENSIGNII Trigger: GATTATGTTCCCGATGCTGTTCTCATGATAGGGAGGGAGTTCTCACAAGATCTGATGGTTTAAGCGTGGCAGTTTCCCCTGAGCTCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS GCA 90 bp | TTTGCCTTAGGATGGGGAATTACTGGGTTTGAGATGAGGGGAGGCTaGTATTCTCTAGCAGGTGTAGATGAGACACTTGTGCTGATGCAA | + |
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Preference number: 5 (lower is better) Translates to: FALGWGITGFEMRGG*YSLAGVDETLVLMQ Trigger: TTGCATCAGCACAAGTGTCTCATCTACACCTGCTAGAGAATAGCAGCCTCCCCTCATCTCAAACCCAGTAATTCCCCATCCTAAGGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS TCA 90 bp | GAGGATAATGCTGGACACAACACCAGAGTTCGGTGCATCTCATTTTaGTGCCAAGGCTACACCACCTTCTTGAAATTAGTGTTACAGTTT | + |
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Preference number: 5 (lower is better) Translates to: EDNAGHNTRVRCISF*CQGYTTFLKLVLQF Trigger: AAACTGTAACACTAATTTCAAGAAGGTGGTGTAGCCTTGGCATCAAAATGAGATGCACCGAACTCTGGTGTTGTGTCCAGCATTATCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS TCA 90 bp | CTGAGACTTGAACCTCATAATTGGTTTAGAATCAATCAAGGGAGGTaGGGTCAGATCTTGAGGACAGCAAGTATAGATTATCCTGTATGG | + |
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Preference number: 5 (lower is better) Translates to: LRLEPHNWFRINQGR*GQILRTASIDYPVW Trigger: CCATACAGGATAATCTATACTTGCTGTCCTCAAGATCTGACCTCACCTCCCTTGATTGATTCTAAACCAATTATGAGGTTCAAGTCTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS TCA 90 bp | AGTAAGATATTTTTGATGTTGGGGAACTTGCTTGTGACTCAGGATTaGATTAAGCAAGGACACCTGAAGTACGTAAGCACTAATAATAAA | + |
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Preference number: 5 (lower is better) Translates to: SKIFLMLGNLLVTQD*IKQGHLKYVSTNNK Trigger: TTTATTATTAGTGCTTACGTACTTCAGGTGTCCTTGCTTAATTCAATCCTGAGTCACAAGCAAGTTCCCCAACATCAAAAATATCTTACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS CCA 72 bp | CAGTCCCCAACCCAAGCCCCAGCCGCGGCGCGGGTGTaGGTGGCCGGACGGGATGGCTTCCGTAGTCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: QSPTQAPAAARV*VAGRDGFRSPG Trigger: CCCGGGACTACGGAAGCCATCCCGTCCGGCCACCCACACCCGCGCCGCGGCTGGGGCTTGGGTTGGGGACTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000578967.1 |
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| CDS TCA 72 bp | CAGGGGAAACTGCCACGCTTAAACCATCAGATCTTGTaGGAACTCCCTCCCCCGGCTTCTTCGCCGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: QGKLPRLNHQIL*ELPPPASSPPQ Trigger: CTGTGGCGGCGAAGAAGCCGGGGGAGGGAGTTCTCACAAGATCTGATGGTTTAAGCGTGGCAGTTTCCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000578967.1 |
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| CDS CCA 72 bp | TGCATGGCTGGGGAGGCCTCAGGAAATGTACAATCATaGCGGAAGGTGAAGAGGAAGCAAAGCACGCCTTAC | + |
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Preference number: 6 (lower is better) Translates to: CMAGEASGNVQS*RKVKRKQSTPY Trigger: GTAAGGCGTGCTTTGCTTCCTCTTCACCTTCCGCCATGATTGTACATTTCCTGAGGCCTCCCCAGCCATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578967.1 ENST00000664848.1 |
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| CDS TCA 72 bp | ATGGGTGAGGGAGACAAAACCCCAGCAGTCATTGTTTaGAGGTTGTTGGCACTTCTCCCTGCTGTGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: MGEGDKTPAVIV*RLLALLPAVRL Trigger: CAGCCTCACAGCAGGGAGAAGTGCCAACAACCTTCAAACAATGACTGCTGGGGTTTTGTCTCCCTCACCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS TCA 72 bp | TCCCACCAGGATCTTCCCTCGACATGTGCATGGGGTTaGCAATTTGAGCTGAGATTTGAGTGGGGACACAGA | + |
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Preference number: 6 (lower is better) Translates to: SHQDLPSTCAWG*QFELRFEWGHR Trigger: TCTGTGTCCCCACTCAAATCTCAGCTCAAATTGTCAACCCCATGCACATGTCGAGGGAAGATCCTGGTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS TCA 72 bp | CAGGGGAAACTGCCACGCTTAAACCATCAGATCTTGTaGGAACTCCCTCCCTATCATGAGAACAGCATCGGG | + |
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Preference number: 6 (lower is better) Translates to: QGKLPRLNHQIL*ELPPYHENSIG Trigger: CCCGATGCTGTTCTCATGATAGGGAGGGAGTTCTCACAAGATCTGATGGTTTAAGCGTGGCAGTTTCCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS TCA 72 bp | GATGAGGGGAGGCTGCTATTCTCTAGCAGGTGTAGATaGGACACTTGTGCTGATGCAAAGGACTTAGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: DEGRLLFSSRCR*DTCADAKDLGE Trigger: TTCCCCTAAGTCCTTTGCATCAGCACAAGTGTCTCATCTACACCTGCTAGAGAATAGCAGCCTCCCCTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS GCA 72 bp | GGATGGGGAATTACTGGGTTTGAGATGAGGGGAGGCTaGTATTCTCTAGCAGGTGTAGATGAGACACTTGTG | + |
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Preference number: 6 (lower is better) Translates to: GWGITGFEMRGG*YSLAGVDETLV Trigger: CACAAGTGTCTCATCTACACCTGCTAGAGAATAGCAGCCTCCCCTCATCTCAAACCCAGTAATTCCCCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS CCA 72 bp | GAATCCAGCCAGGCAATCTCCCTCCTGGGAACACTTTaGGTACCAATTGCCTTTCCCAAGAAAAACAATGAC | + |
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Preference number: 6 (lower is better) Translates to: ESSQAISLLGTL*VPIAFPKKNND Trigger: GTCATTGTTTTTCTTGGGAAAGGCAATTGGTACCCAAAGTGTTCCCAGGAGGGAGATTGCCTGGCTGGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS TCA 72 bp | GCTGGACACAACACCAGAGTTCGGTGCATCTCATTTTaGTGCCAAGGCTACACCACCTTCTTGAAATTAGTG | + |
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Preference number: 6 (lower is better) Translates to: AGHNTRVRCISF*CQGYTTFLKLV Trigger: CACTAATTTCAAGAAGGTGGTGTAGCCTTGGCATCAAAATGAGATGCACCGAACTCTGGTGTTGTGTCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS CCA 72 bp | TCGGAGGTTCTTCCAGAATATACTAGCAGAGACTATTaGGAACTGAGACCAGGACAGGAAGACAGCCATGTA | + |
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Preference number: 6 (lower is better) Translates to: SEVLPEYTSRDY*ELRPGQEDSHV Trigger: TACATGGCTGTCTTCCTGTCCTGGTCTCAGTTCCCAATAGTCTCTGCTAGTATATTCTGGAAGAACCTCCGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS CAA 72 bp | AAGAAGCCCTTAGAAAATGTCTGCAGTTGCAGGCCATaGGAGATCAGGTCAATGGACCTTGACATATGCCCA | + |
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Preference number: 6 (lower is better) Translates to: KKPLENVCSCRP*EIRSMDLDICP Trigger: TGGGCATATGTCAAGGTCCATTGACCTGATCTCCAATGGCCTGCAACTGCAGACATTTTCTAAGGGCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS CAA 90 bp | CTATTGGGAACTGAGACCAGGACAGGAAGACAGCCATGTAACTGTTaGTTATCAAGCACATCAGTACTATGCAAAACTAGTCGGTCACCC | + |
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Preference number: 6 (lower is better) Translates to: LLGTETRTGRQPCNC*LSSTSVLCKTSRSP Trigger: GGGTGACCGACTAGTTTTGCATAGTACTGATGTGCTTGATAACAAACAGTTACATGGCTGTCTTCCTGTCCTGGTCTCAGTTCCCAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS CCA 72 bp | AAGTATAGATTATCCTGTATGGCTTTTGCCTTAGGATaGGGAATTACTGGGTTTGAGATGAGGGGAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: KYRLSCMAFALG*GITGFEMRGGC Trigger: GCAGCCTCCCCTCATCTCAAACCCAGTAATTCCCCATCCTAAGGCAAAAGCCATACAGGATAATCTATACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS TCA 72 bp | CCAGACAGAAACAGAATTTCCCCAGTGAGGACATGCTaGGACTTGAACCTCATAATTGGTTTAGAATCAATC | + |
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Preference number: 6 (lower is better) Translates to: PDRNRISPVRTC*DLNLIIGLESI Trigger: GATTGATTCTAAACCAATTATGAGGTTCAAGTCTCAGCATGTCCTCACTGGGGAAATTCTGTTTCTGTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS TCA 72 bp | TTTTTGATGTTGGGGAACTTGCTTGTGACTCAGGATTaGATTAAGCAAGGACACCTGAAGTACGTAAGCACT | + |
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Preference number: 6 (lower is better) Translates to: FLMLGNLLVTQD*IKQGHLKYVST Trigger: AGTGCTTACGTACTTCAGGTGTCCTTGCTTAATTCAATCCTGAGTCACAAGCAAGTTCCCCAACATCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS CAA 72 bp | ACTGAGACCAGGACAGGAAGACAGCCATGTAACTGTTaGTTATCAAGCACATCAGTACTATGCAAAACTAGT | + |
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Preference number: 6 (lower is better) Translates to: TETRTGRQPCNC*LSSTSVLCKTS Trigger: ACTAGTTTTGCATAGTACTGATGTGCTTGATAACAAACAGTTACATGGCTGTCTTCCTGTCCTGGTCTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS TCA 72 bp | GAACCTCATAATTGGTTTAGAATCAATCAAGGGAGGTaGGGTCAGATCTTGAGGACAGCAAGTATAGATTAT | + |
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Preference number: 6 (lower is better) Translates to: EPHNWFRINQGR*GQILRTASIDY Trigger: ATAATCTATACTTGCTGTCCTCAAGATCTGACCTCACCTCCCTTGATTGATTCTAAACCAATTATGAGGTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS GCA 72 bp | ACTCATTCATTTGTGTATTCGTCCATTCAATCAGCCTaGAGTCACTCGTTTAGGTATTTATTTTGGTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: THSFVYSSIQSA*SHSFRYLFWWS Trigger: ACTCCACCAAAATAAATACCTAAACGAGTGACTGCAGGCTGATTGAATGGACGAATACACAAATGAATGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664848.1 |
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| CDS GCA 72 bp | GCATTTGGTATTCCAGAAGGGCAGATTTTCTGTTCATaGACTTCTATCCGTATATATGTAGTTATGAATCCT | + |
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Preference number: 6 (lower is better) Translates to: AFGIPEGQIFCS*TSIRIYVVMNP Trigger: AGGATTCATAACTACATATATACGGATAGAAGTGCATGAACAGAAAATCTGCCCTTCTGGAATACCAAATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000578967.1 ENST00000580564.1 ENST00000664848.1 |
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| CDS CAA 72 bp | CTCCAAATTCTGCTTGTAGTCACTTTAATTTTGCATTaGGTATTCCAGAAGGGCAGATTTTCTGTTCATGCA | + |
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Preference number: 6 (lower is better) Translates to: LQILLVVTLILH*VFQKGRFSVHA Trigger: TGCATGAACAGAAAATCTGCCCTTCTGGAATACCAAATGCAAAATTAAAGTGACTACAAGCAGAATTTGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000578967.1 ENST00000580564.1 ENST00000664848.1 |
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