RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NES (Homo sapiens)

Ensembl gene IDs: ENSG00000132688

Ensembl transcript IDs: ENST00000368223.4

Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACCCTCCCTTTGGAGAAGCCTCTGGGCCACAGGCCTTTTCCAGCTaGCGGGATGCGGAGGGAAGGGGACCTAGTACTATCGGGATTCAG +
Preference number: 1 (lower is better)
Translates to: HPPFGEASGPQAFSS*RDAEGRGPSTIGIQ
Trigger: CTGAATCCCGATAGTACTAGGTCCCCTTCCCTCCGCATCCCGTCAGCTGGAAAAGGCCTGTGGCCCAGAGGCTTCTCCAAAGGGAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
3UTR GCA 90 bp GGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCCTTTaGCACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGA +
Preference number: 1 (lower is better)
Translates to: GRLYSYSLHSWSRLL*HTPFHLSGPGLSAR
Trigger: TCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
3UTR CCA 90 bp TTCCCTTTGCAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTaGAGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGGGCCA +
Preference number: 1 (lower is better)
Translates to: FPLQGGRLYSYSLHS*SRLLCHTPFHLSGP
Trigger: TGGCCCGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTGCAAAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
3UTR GCA 90 bp TCAGCTGACTTAGCCTATGAGATGGAGCAGGCAAGAGATTCCCTTTaGAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTA +
Preference number: 1 (lower is better)
Translates to: SADLAYEMEQARDSL*RVGGYIPTASILGV
Trigger: TACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTCATAGGCTAAGTCAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
3UTR-3UTR TCA 90 bp GGGAGTCAGCACATGGGAGTGCCGTCACCTCCATTAGCCACAGGCCAGACGGCCGGTGCACTACTGCAGTaGGGTGGCGCAGGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: GSQHMGVPSPPLATGQTAGALLQ*GGAGLV
Trigger: CACCAGCCCTGCGCCACCTCACTGCAGTAGTGCACC...GGCCGTCTGGCCTGTGGCTAATGGAGGTGACGGCACTCCCATGTGCTGACTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
3UTR-3UTR TCA 90 bp GGGAGTCAGCACATGGGAGTGCCGTCACCTCCATTAGCCACAGGCCAGACGGCCGGCGTGCTACTGCAGTaGGATGGTGCACTACTGCAG +
Preference number: 2 (lower is better)
Translates to: GSQHMGVPSPPLATGQTAGVLLQ*DGALLQ
Trigger: CTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCC...GGCCGTCTGGCCTGTGGCTAATGGAGGTGACGGCACTCCCATGTGCTGACTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
3UTR-3UTR CCA 90 bp CCTTTGCAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCAGCAGGGAGCGGGCTTaGAGGCGTCCTTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: PLQGGRLYSYSLHSWSRLSRERA*RRPSPP
Trigger: GGGAGGGGAAGGACGCCTCCAAGCCCGCTCCCTGCT...GAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTGCAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
3UTR-3UTR CCA 90 bp GGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGTGGATTCCCTTTGCAGGGTaGGAGGTTATATTCCTACAG +
Preference number: 2 (lower is better)
Translates to: GPGGRATAVRWCTTAVRWIPFAG*EVIFLQ
Trigger: CTGTAGGAATATAACCTCCCACCCTGCAAAGGGAAT...CCACCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
3UTR CCA 72 bp CCAGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATaGTGCACTACTGCAGTGAGGTGGCGCAGGGCTGGT +
Preference number: 3 (lower is better)
Translates to: PDGPGGRATAVR*CTTAVRWRRAG
Trigger: ACCAGCCCTGCGCCACCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
3UTR-3UTR CAA 90 bp CGGAGGCATTACTTTATTCAGGCAGGGACTAGCCAGGCAGGGCCACAGCGTGGCCATGTCACCCTCCCTTaGGAGAAGCCTCTGGGCCAC +
Preference number: 3 (lower is better)
Translates to: RRHYFIQAGTSQAGPQRGHVTLP*EKPLGH
Trigger: GTGGCCCAGAGGCTTCTCCAAAGGGAGGGTGACATG...GCCACGCTGTGGCCCTGCCTGGCTAGTCCCTGCCTGAATAAAGTAATGCCTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
3UTR TCA 72 bp TTTGGAGAAGCCTCTGGGCCACAGGCCTTTTCCAGCTaGCGGGATGCGGAGGGAAGGGGACCTAGTACTATC +
Preference number: 3 (lower is better)
Translates to: FGEASGPQAFSS*RDAEGRGPSTI
Trigger: GATAGTACTAGGTCCCCTTCCCTCCGCATCCCGTCAGCTGGAAAAGGCCTGTGGCCCAGAGGCTTCTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
3UTR GCA 72 bp TATTCCTACAGCCTCCATTCTTGGAGTAGGCTCCTTTaGCACACCCCTTTTCACCTTAGCGGGCCAGGCCTC +
Preference number: 3 (lower is better)
Translates to: YSYSLHSWSRLL*HTPFHLSGPGL
Trigger: GAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCAAGAATGGAGGCTGTAGGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
3UTR-3UTR CAA 90 bp TTGAAGCGGAGGCATTACTTTATTCAGGCAGGGACTAGCCAGGCAGGGCCACAGGGCAAGAGATTCCCTTaGCAGGGTGGGAGGTTATAT +
Preference number: 3 (lower is better)
Translates to: LKRRHYFIQAGTSQAGPQGKRFP*QGGRLY
Trigger: ATATAACCTCCCACCCTGCAAAGGGAATCTCTTGCC...CTGTGGCCCTGCCTGGCTAGTCCCTGCCTGAATAAAGTAATGCCTCCGCTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
3UTR CCA 72 bp CAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTaGAGTAGGCTCCTTTGCCACACCCCTTTTCACCTT +
Preference number: 3 (lower is better)
Translates to: QGGRLYSYSLHS*SRLLCHTPFHL
Trigger: AAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
3UTR GCA 72 bp TTAGCCTATGAGATGGAGCAGGCAAGAGATTCCCTTTaGAGGGTGGGAGGTTATATTCCTACAGCCTCCATT +
Preference number: 3 (lower is better)
Translates to: LAYEMEQARDSL*RVGGYIPTASI
Trigger: AATGGAGGCTGTAGGAATATAACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTCATAGGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp GTGCTGCTCCTGAGCAGGGAGCGGGCTTGGAGGCGTCCTTCCCCTCCCCGCACCGGTAGCAGGCAAGGGTaGGGGGAGGGAAGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VLLLSRERAWRRPSPPRTGSRQG*GEGSWA
Trigger: AGCCCAACTTCCCTCCCCTCACCCTTGCCTGCTACC...GGTGCGGGGAGGGGAAGGACGCCTCCAAGCCCGCTCCCTGCTCAGGAGCAGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp GGGAGTCAGCACATGGGAGTGCCGTCACCTCCATTAGCCACAGGCCAGACGGCCCGGGCCAGCCGCAGCTaGTGGCATCGGCCTGCCACG +
Preference number: 4 (lower is better)
Translates to: GSQHMGVPSPPLATGQTARASRS*WHRPAT
Trigger: CGTGGCAGGCCGATGCCAGCAGCTGCGGCTGGCCCG...GGCCGTCTGGCCTGTGGCTAATGGAGGTGACGGCACTCCCATGTGCTGACTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp GTGCTGCTCCTGAGCAGGGAGCGGGCTTGGAGGCGTCCTTCCCCTCCCCGCACCCGACGTCTCCATGTGTaGCACGCGCTCCTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: VLLLSRERAWRRPSPPRTRRLHV*HALLVA
Trigger: GGCTACCAGGAGCGCGTGGCACACATGGAGACGTCG...GGTGCGGGGAGGGGAAGGACGCCTCCAAGCCCGCTCCCTGCTCAGGAGCAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp TCCATTAGCCACAGGCCAGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGGCTCCTCCAGCGCCTTaGCCCGGGCCAGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: SISHRPDGPGGRATAVRWAPPAP*PGPGRP
Trigger: AGGCCTACCTGGCCCGGGTCAAGGCGCTGGAGGAGC...CCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCTGGCCTGTGGCTAATGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CGGAGGCATTACTTTATTCAGGCAGGGACTAGCCAGGCAGGGCCACAGCGTGGCGGGGCACAGGCAGCCTaGGCGTTCAGGCCGACGCGC +
Preference number: 4 (lower is better)
Translates to: RRHYFIQAGTSQAGPQRGGAQAA*AFRPTR
Trigger: GCGCGTCGGCCTGAACGCGCAGGCTGCCTGTGCCCC...GCCACGCTGTGGCCCTGCCTGGCTAGTCCCTGCCTGAATAAAGTAATGCCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp GTGCTGCTCCTGAGCAGGGAGCGGGCTTGGAGGCGTCCTTCCCCTCCCCGCACCGTGAACAGGAGCCCCTaGCCAAGAGGTCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: VLLLSRERAWRRPSPPRTVNRSP*PRGLQS
Trigger: GCTCTGAAGACCTCTTGGGCAGGGGCTCCTGTTCAC...GGTGCGGGGAGGGGAAGGACGCCTCCAAGCCCGCTCCCTGCTCAGGAGCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CGGAGGCATTACTTTATTCAGGCAGGGACTAGCCAGGCAGGGCCACAGCGTGGCGCCACCTCGGCCGCGTaGTTCTCCCGCCAGCGTTGG +
Preference number: 4 (lower is better)
Translates to: RRHYFIQAGTSQAGPQRGATSAA*FSRQRW
Trigger: CCAACGCTGGCGGGAGAAGCACGCGGCCGAGGTGGC...GCCACGCTGTGGCCCTGCCTGGCTAGTCCCTGCCTGAATAAAGTAATGCCTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp GTGCTGCTCCTGAGCAGGGAGCGGGCTTGGAGGCGTCCTTCCCCTCCCCGCACCCTGGGCTCTGATCTCTaGATCTACAGCAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: VLLLSRERAWRRPSPPRTLGSDL*IYSRRG
Trigger: CCCTCTCCTGCTGTAGATGCAGAGATCAGAGCCCAG...GGTGCGGGGAGGGGAAGGACGCCTCCAAGCCCGCTCCCTGCTCAGGAGCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp TTAAGAGTGCTGCTCCTGAGCAGGGAGCGGGCTTGGAGGCGTCCTTCCCCTCCCCAGGAATGGCCACCCTaGCTTCAGCCCGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LRVLLLSRERAWRRPSPPQEWPP*LQPAGA
Trigger: AGCCCCTGCGGGCTGAAGCCAGGGTGGCCATTCCTG...GGGAGGGGAAGGACGCCTCCAAGCCCGCTCCCTGCTCAGGAGCAGCACTCTTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp GGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGTGGCCTCTGTTCCAACGCTaGCCTGCGCTCCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GPGGRATAVRWCTTAVRWPLFQR*PALQEA
Trigger: GGCCTCCTGGAGCGCAGGGCAGCGTTGGAACAGAGG...CCACCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CGGAGGCATTACTTTATTCAGGCAGGGACTAGCCAGGCAGGGCCACAGCGTGGCGGGACTGGCCTGTACTaGCCTCTTGCCGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RRHYFIQAGTSQAGPQRGGTGLY*PLAAGP
Trigger: GGGGCCAGCGGCAAGAGGCCAGTACAGGCCAGTCCC...GCCACGCTGTGGCCCTGCCTGGCTAGTCCCTGCCTGAATAAAGTAATGCCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp TCCATTAGCCACAGGCCAGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGCTCCCCTTGAGGGGGTaGCCTCTGCTCTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: SISHRPDGPGGRATAVRWLPLRG*PLLSSG
Trigger: CCCACTGGAGAGCAGAGGCCACCCCCTCAAGGGGAG...CCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCTGGCCTGTGGCTAATGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp GGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGTGGCAGGCCTTTTCCAGCTaGCGGGATGCGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GPGGRATAVRWCTTAVRWQAFSS*RDAEGR
Trigger: CCTTCCCTCCGCATCCCGTCAGCTGGAAAAGGCCTG...CCACCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp GGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGTGGGCTCCCAAGGGTCTCTaGTCTTCCCAGGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: GPGGRATAVRWCTTAVRWAPKGL*SSQAAR
Trigger: CCGAGCTGCCTGGGAAGAGCAGAGACCCTTGGGAGC...CCACCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp GTCACCCTCCCTTTGGAGAAGCCTCTGGGCCACAGGCCTTTTCCAGCTGACGGGCGGCCCAGGAGGGCGTaGTACTGCAGTGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: VTLPLEKPLGHRPFPADGRPRRA*YCSEMV
Trigger: CACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCG...CCCGTCAGCTGGAAAAGGCCTGTGGCCCAGAGGCTTCTCCAAAGGGAGGGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp AGAGATCGTAAGTTAAGAGTGCTGCTCCTGAGCAGGGAGCGGGCTTGGAGGCGTGCCCCCAGGCTCCTCTaGTCCAGGCAGGACGCTGGC +
Preference number: 4 (lower is better)
Translates to: RDRKLRVLLLSRERAWRRAPRLL*SRQDAG
Trigger: GCCAGCGTCCTGCCTGGACCAGAGGAGCCTGGGGGC...ACGCCTCCAAGCCCGCTCCCTGCTCAGGAGCAGCACTCTTAACTTACGATCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp GGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGTGGCAGGGGAGTGGAGTCTaGAAGGGTCTCCCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: GPGGRATAVRWCTTAVRWQGSGV*KGLPEL
Trigger: GAGCTCGGGGAGACCCTTCCAGACTCCACTCCCCTG...CCACCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp GGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGTGGGGATCCAGTAGCAGCTaGGGCACCTGGCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GPGGRATAVRWCTTAVRWGSSSS*GTWPRG
Trigger: ACCTCTGGGCCAGGTGCCCCAGCTGCTACTGGATCC...CCACCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp GTCACCCTCCCTTTGGAGAAGCCTCTGGGCCACAGGCCTTTTCCAGCTGACGGGCCTCCAGGCGCCGATTaGGCTCCCACATCTGAAACG +
Preference number: 4 (lower is better)
Translates to: VTLPLEKPLGHRPFPADGPPGAD*APTSET
Trigger: CGTTTCAGATGTGGGAGCTCAATCGGCGCCTGGAGG...CCCGTCAGCTGGAAAAGGCCTGTGGCCCAGAGGCTTCTCCAAAGGGAGGGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp GGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGTGGCGCAGGCCCCAGAGGCCAAGGTaGAGGGGCATCACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: GGRATAVRWCTTAVRWRRPQRPR*RGITSS
Trigger: ACTGGAAGTGATGCCCCTTCACCTTGGCCTCTGGGG...CCTGCGCCACCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp TTAAGAGTGCTGCTCCTGAGCAGGGAGCGGGCTTGGAGGCGTCCTTCCCCTCCCCTGAGCAGCTCATTCTaGTCCTCCAGCGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: LRVLLLSRERAWRRPSPPLSSSF*SSSALT
Trigger: GGTCAAGGCGCTGGAGGAGCAGAATGAGCTGCTCAG...GGGAGGGGAAGGACGCCTCCAAGCCCGCTCCCTGCTCAGGAGCAGCACTCTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp AGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGGGGGCACCAGCCACTaGACCCCTCAAGCTGTCATC +
Preference number: 4 (lower is better)
Translates to: RRPRRACYCSEMVHYCSEGGTSH*TPQAVI
Trigger: GATGACAGCTTGAGGGGTGCAGTGGCTGGTGCCCCC...CTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CCAGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGGGCCTCTCTGCTCTTTaGGCTCAGGGCTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PDGPGGRATAVRWCTTAVGLSAL*AQGSLG
Trigger: ACCCAGAGAGCCCTGAGCCCAAAGAGCAGAGAGGCC...CACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp GGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGTGGCGCAGGGGCTTGGTCACCCCCTaGGGCCACATCATCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GGRATAVRWCTTAVRWRRGLVTP*GHIIFH
Trigger: GTGGAAGATGATGTGGCCCCAGGGGGTGACCAAGCC...CCTGCGCCACCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp TCCATTAGCCACAGGCCAGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGGGGTCCTGAAAGCTaGGGGAAGTCTTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SISHRPDGPGGRATAVRWWGPES*GKSWSH
Trigger: GTGGCTCCAAGACTTCCCTCAGCTTTCAGGACCCCA...CCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCTGGCCTGTGGCTAATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp TTAAGAGTGCTGCTCCTGAGCAGGGAGCGGGCTTGGAGGCGTCCTTCCCCTCCCGTCAGACTCTTCCTCTaGGCCAGAAGGCTCAGCACT +
Preference number: 4 (lower is better)
Translates to: LRVLLLSRERAWRRPSPPVRLFL*ARRLST
Trigger: AGTGCTGAGCCTTCTGGCTCAGAGGAAGAGTCTGAC...GGGAGGGGAAGGACGCCTCCAAGCCCGCTCCCTGCTCAGGAGCAGCACTCTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp CATTCTTGGAGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGGGCCAGGCCTCCCCTCCTCCTCCTaGAAGGGGCTCCCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: HSWSRLLCHTPFHLSGPGLPSSS*KGLPRS
Trigger: AGACCGAGGGAGCCCCTTTCAGGAGGAGGAGGGGAG...GCCTGGCCCGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCAAGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAGTTCCAACGCTGCCCTaGGCTCCAGGAGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: HTPFHLSGPGLSARNHMSVPTLP*APGGLR
Trigger: GCGGAGGCCTCCTGGAGCGCAGGGCAGCGTTGGAAC...TGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CCAGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGCCCACCTGTTGTGATTaGCCTTCAGGGTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PDGPGGRATAVRWCTTAVPTCCD*PSGSWR
Trigger: CCTCCAGGACCCTGAAGGGCAATCACAACAGGTGGG...CACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGGGAACGCCTCCTCTaGTCCCCTGGGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: HTPFHLSGPGLSARNHMSRERLL*SPGGLS
Trigger: GCTGAGGCCCCCAGGGGAGCAGAGGAGGCGTTCCCT...TGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp ACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAAGCCGCTCGCGGGCCTaGCCCAGCGACGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: TPLFTLAGQASQPETICQSRSRA*PSDVSM
Trigger: CATGGAGACGTCGCTGGGCCAGGCCCGCGAGCGGCT...TTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAGCCTCTGCTCTCCAGTaGGGTCCCACCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: HTPFHLSGPGLSARNHMSASALQ*GPTWGR
Trigger: CCTCCCCCAGGTGGGACCCCACTGGAGAGCAGAGGC...TGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp AGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGGCTCAGCACTGTCCTaGGACTCCGTTTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RRPRRACYCSEMVHYCSEGSALS*DSVSRA
Trigger: TGCCCTGGAAACGGAGTCCCAGGACAGTGCTGAGCC...CTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp AGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCGGGGGAGTCAGCACATaGGAGTGCCGTCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: SRLLCHTPFHLSGPGLSAGGVST*ECRHLH
Trigger: ATGGAGGTGACGGCACTCCCATGTGCTGACTCCCCC...GGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp GGGAGTCAGCACATGGGAGTGCCGTCACCTCCATTAGCCACAGGCCAGACGGCCGACCTCAGGGGTTCCTaGTTCTCCTTTGTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GSQHMGVPSPPLATGQTADLRGS*FSFVRG
Trigger: ACCTCTGACAAAGGAGAATCAGGAACCCCTGAGGTC...GGCCGTCTGGCCTGTGGCTAATGGAGGTGACGGCACTCCCATGTGCTGACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp TTAAGAGTGCTGCTCCTGAGCAGGGAGCGGGCTTGGAGGCGTCCTTCCCCTCCCGTCCTCAAATTCTTCTaGCAGGTCAGAGTCACGGCC +
Preference number: 4 (lower is better)
Translates to: LRVLLLSRERAWRRPSPPVLKFF*QVRVTA
Trigger: GGCCGTGACTCTGACCTGTCAGAAGAATTTGAGGAC...GGGAGGGGAAGGACGCCTCCAAGCCCGCTCCCTGCTCAGGAGCAGCACTCTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp ACAGCCTCCATTCTTGGAGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGCCGGGCGCATTTCTCTaGCTCGACGGCGCGCCGGTT +
Preference number: 4 (lower is better)
Translates to: TASILGVGSFATPLFTLAPGAFL*LDGAPV
Trigger: AACCGGCGCGCCGTCGAGGCAGAGAAATGCGCCCGG...CGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCAAGAATGGAGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGAGCTCGCCCAGTCGCCTTaGCAGCTCCTCTACCTCCGG +
Preference number: 4 (lower is better)
Translates to: PLFTLAGQASQPETICQELAQSP*QLLYLR
Trigger: CCGGAGGTAGAGGAGCTGGCAAGGCGACTGGGCGAG...CTCTTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp GGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGTGGAACACCAATGATGTCTaGCCCTGGGCCTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: GPGGRATAVRWCTTAVRWNTNDV*PWACIL
Trigger: GAGGATGCAGGCCCAGGGGCAGACATCATTGGTGTT...CCACCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp GGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGTGGCGCAGGCCCACTTCCTCAGACTaGTCCAGCCCGTTCATCACT +
Preference number: 4 (lower is better)
Translates to: GGRATAVRWCTTAVRWRRPTSSD*SSPFIT
Trigger: AGTGATGAACGGGCTGGAGCAGTCTGAGGAAGTGGG...CCTGCGCCACCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CCAGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGAGGGCGTGCTACTaGAGTGAGATGGTGCACTAC +
Preference number: 4 (lower is better)
Translates to: PDGPGGRATAVRWCTTAVRRACY*SEMVHY
Trigger: GTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCT...CACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp TTGAAGCGGAGGCATTACTTTATTCAGGCAGGGACTAGCCAGGCAGGGCCACAGTTCTCCCGCCAGCGTTaGTCAACGAGGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LKRRHYFIQAGTSQAGPQFSRQR*STRARR
Trigger: CCTGCGGGCCCTCGTTGACCAACGCTGGCGGGAGAA...CTGTGGCCCTGCCTGGCTAGTCCCTGCCTGAATAAAGTAATGCCTCCGCTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp GAGATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTTATATTCCTACAGCCAGCCGCAGCTGCTaGCATCGGCCTGCCACGCCC +
Preference number: 4 (lower is better)
Translates to: EMEQARDSLCRVGGYIPTASRSC*HRPATP
Trigger: GGGCGTGGCAGGCCGATGCCAGCAGCTGCGGCTGGC...TGTAGGAATATAACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp AGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCGCCTCTAAACTGGAGTaGTCAGGGCTGAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SRLLCHTPFHLSGPGLSAASKLE*SGLRGG
Trigger: ACCACCCCTCAGCCCTGACCACTCCAGTTTAGAGGC...GGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp GGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGTGGCGCAGGGGAGACCAGCACTGGTaGTACATCCTCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GGRATAVRWCTTAVRWRRGDQHW*YILLSF
Trigger: GAAGCTGAGGAGGATGTACCACCAGTGCTGGTCTCC...CCTGCGCCACCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CATTCTTGGAGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGGGCCAGGCGGGTGTACGTTGGGCTaGGGGAGACCAGCACTGGTG +
Preference number: 4 (lower is better)
Translates to: HSWSRLLCHTPFHLSGPGGCTLG*GRPALV
Trigger: CACCAGTGCTGGTCTCCCCCAGCCCAACGTACACCC...GCCTGGCCCGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCAAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp ACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAAGCAGGGAGCGGGCTTaGAGGCGTCCTTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TPLFTLAGQASQPETICQSRERA*RRPSPP
Trigger: GGGAGGGGAAGGACGCCTCCAAGCCCGCTCCCTGCT...TTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp ATGTCAAGAGATCGTAAGTTAAGAGTGCTGCTCCTGAGCAGGGAGCGGGCTTGGGCTCGTCTGACCCACTaGGGATGGACAGACGCGGGG +
Preference number: 4 (lower is better)
Translates to: MSRDRKLRVLLLSRERAWARLTH*GWTDAG
Trigger: CCCCGCGTCTGTCCATCCTCAGTGGGTCAGACGAGC...CCAAGCCCGCTCCCTGCTCAGGAGCAGCACTCTTAACTTACGATCTCTTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp ACAGCCTCCATTCTTGGAGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGCCCCGAGCTCCGCGCTaGGCAGCTCATTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TASILGVGSFATPLFTLAPRAPR*AAHSAP
Trigger: AGGAGCAGAATGAGCTGCTCAGCGCGGAGCTCGGGG...CGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCAAGAATGGAGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp CCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGAGGGCCCCCACCTGTTGTaGTTGCCCTTCAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PLFTLAGQASQPETICQEGPHLL*LPFRVL
Trigger: CAGGACCCTGAAGGGCAATCACAACAGGTGGGGGCC...CTCTTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp CCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGAGGTGGCGCAGGGCTGGTaGGCTTGGGCACAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: PLFTLAGQASQPETICQEVAQGW*AWAQKP
Trigger: TGGCTTTTGTGCCCAAGCTCACCAGCCCTGCGCCAC...CTCTTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp ACAGCCTCCATTCTTGGAGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGCTGCTGGCATCGGCCTaGCACGCCCTCCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TASILGVGSFATPLFTLALLASA*HALQLF
Trigger: GAAGAGCTGGAGGGCGTGGCAGGCCGATGCCAGCAG...CGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCAAGAATGGAGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp ATGAGATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTTATATTCCTACGACGGCGCGCCGGTTaGGGGCTACCTCCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: MRWSRQEIPFAGWEVIFLRRRAG*GLPPPS
Trigger: CGACGGAGGAGGTAGCCCGCAACCGGCGCGCCGTCG...TAGGAATATAACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp GACTTAGCCTATGAGATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTACGCGCTCCTCCTCGTaGGCCACGCGTAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: DLAYEMEQARDSLCRVGGTRSSS*ATRRAS
Trigger: AGAGGCTCTACGCGTGGCGCACGAGGAGGAGCGCGT...ACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTCATAGGCTAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp TTGAAGCGGAGGCATTACTTTATTCAGGCAGGGACTAGCCAGGCAGGGCCACAGCCACCGCCAGGTGTTTaGAGCCGGGAGTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LKRRHYFIQAGTSQAGPQPPPGV*SREFSA
Trigger: GGCTGAGAACTCCCGGCTGCAAACACCTGGCGGTGG...CTGTGGCCCTGCCTGGCTAGTCCCTGCCTGAATAAAGTAATGCCTCCGCTTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGAGATCCCTGTACTGGCCTCTTaGCGCTGGCCCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LFTLAGQASQPETICQEIPVLAS*RWPPGS
Trigger: GGAGCCTGGGGGCCAGCGGCAAGAGGCCAGTACAGG...GATCTCTTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGAGTCAGGGCCTGGAGGCTaGCAACAGAAGACCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PLFTLAGQASQPETICQESGPGG*QQKTLA
Trigger: GGCCAGGGTCTTCTGTTGGCAGCCTCCAGGCCCTGA...CTCTTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp GACTTAGCCTATGAGATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTAGCCCGCAGGGGCTCTaGAGCCTGTTTCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: DLAYEMEQARDSLCRVGGSPQGL*SLFPPT
Trigger: GGTGGGAGGAAACAGGCTCCAGAGCCCCTGCGGGCT...ACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTCATAGGCTAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp AGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGTCCAGACCTCCTCTGTaGCATTCAGCTCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RRPRRACYCSEMVHYCSESRPPL*HSALPA
Trigger: AGCAGGGAGAGCTGAATGCCACAGAGGAGGTCTGGA...CTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CCTTTGCAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCTGCCCTTCAGGGTCCTaGAGGCCCTCAGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PLQGGRLYSYSLHSWSRLCPSGS*RPSAPP
Trigger: GGGAGGGGCTGAGGGCCTCCAGGACCCTGAAGGGCA...GAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTGCAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp CCTTTGCAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCGGTGCACTACTGCAGTaGGGTGGCGCAGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PLQGGRLYSYSLHSWSRLGALLQ*GGAGLV
Trigger: CACCAGCCCTGCGCCACCTCACTGCAGTAGTGCACC...GAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTGCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp AACCATATGTCAAGAGATCGTAAGTTAAGAGTGCTGCTCCTGAGCAGGGAGCGGAGCTCGTCGTCGGCATaGGCCCGCCAGGAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: NHMSRDRKLRVLLLSRERSSSSA*ARQEVS
Trigger: GGACACCTCCTGGCGGGCGCATGCCGACGACGAGCT...CCGCTCCCTGCTCAGGAGCAGCACTCTTAACTTACGATCTCTTGACATATGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp ACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAAGGCCCTGTTTCTCCTaGTCCAGGGCCTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: TPLFTLAGQASQPETICQRPCFS*SRASTA
Trigger: GGCTGTGGAGGCCCTGGAGCAGGAGAAACAGGGCCT...TTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CATTCTTGGAGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGGGCCAGGCTCAACCAGGCCTCTCTaGTCTTTGGGCTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: HSWSRLLCHTPFHLSGPGSTRPL*SLGSGL
Trigger: GAGCCCTGAGCCCAAAGAGCAGAGAGGCCTGGTTGA...GCCTGGCCCGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCAAGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp GTCACCCTCCCTTTGGAGAAGCCTCTGGGCCACAGGCCTTTTCCAGCTGACGGGTGGAGTAGGCTCCTTTaGCACACCCCTTTTCACCTT +
Preference number: 4 (lower is better)
Translates to: VTLPLEKPLGHRPFPADGWSRLL*HTPFHL
Trigger: AAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCA...CCCGTCAGCTGGAAAAGGCCTGTGGCCCAGAGGCTTCTCCAAAGGGAGGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp GGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGTGGCGCAGGGTAGGGGTACGGGCCTaGAGGAATTCTTGGTTCTTA +
Preference number: 4 (lower is better)
Translates to: GGRATAVRWCTTAVRWRRVGVRA*RNSWFL
Trigger: TAAGAACCAAGAATTCCTCCAGGCCCGTACCCCTAC...CCTGCGCCACCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CCTTTGCAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCGGACGCTGGCAGGAATaGCCACCCTGGCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: PLQGGRLYSYSLHSWSRLGRWQE*PPWLQP
Trigger: GGGCTGAAGCCAGGGTGGCCATTCCTGCCAGCGTCC...GAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTGCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp ACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGGAGGCATGGTCCTCTaGGGACTGGCCTGTACTGGC +
Preference number: 4 (lower is better)
Translates to: TPLFTLAGQASQPETICQGGMVL*GLACTG
Trigger: GCCAGTACAGGCCAGTCCCCAGAGGACCATGCCTCC...TTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp ACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAATGGGTGCCCCTCGCCTaGGATCCAGACCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: TPLFTLAGQASQPETICQWVPLA*DPDLLC
Trigger: ACAGAGGAGGTCTGGATCCCAGGCGAGGGGCACCCA...TTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp ATGTCAAGAGATCGTAAGTTAAGAGTGCTGCTCCTGAGCAGGGAGCGGGCTTGGTCTTCCCTGGTCAGATaGCCTGGGTCCCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: MSRDRKLRVLLLSRERAWSSLVR*PGSPSP
Trigger: AGGGCTGGGGGACCCAGGCCATCTGACCAGGGAAGA...CCAAGCCCGCTCCCTGCTCAGGAGCAGCACTCTTAACTTACGATCTCTTGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CATTCTTGGAGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGGGCCAGGCCCAGTGCCGGGCAGATaGTCTTTTCCTAGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: HSWSRLLCHTPFHLSGPGPVPGR*SFPSPP
Trigger: GGGAGGACTAGGAAAAGACCATCTGCCCGGCACTGG...GCCTGGCCCGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCAAGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368223.4
3UTR CAA 72 bp GAGCTTGGGCACAAAAGCCAGCATGTCACCCTCCCTTaGGAGAAGCCTCTGGGCCACAGGCCTTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ELGHKSQHVTLP*EKPLGHRPFPA
Trigger: AGCTGGAAAAGGCCTGTGGCCCAGAGGCTTCTCCAAAGGGAGGGTGACATGCTGGCTTTTGTGCCCAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp ACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAACGACCTTCCAGGACCTaGGCGATCTGGCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: TPLFTLAGQASQPETICQRPSRT*AIWLCR
Trigger: CCTACAGAGCCAGATCGCTCAGGTCCTGGAAGGTCG...TTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp TCCATTAGCCACAGGCCAGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGGACCTCGGACATTCTTaGTTCTCCCTTTCTAGTGTC +
Preference number: 4 (lower is better)
Translates to: SISHRPDGPGGRATAVRWDLGHS*FSLSSV
Trigger: GACACTAGAAAGGGAGAATCAAGAATGTCCGAGGTC...CCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCTGGCCTGTGGCTAATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp CCAGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGGACCTCCGTCGCTGTTaGGTCTCTTTTTCAAGAGTT +
Preference number: 4 (lower is better)
Translates to: PDGPGGRATAVRWCTTAVDLRRC*VSFSRV
Trigger: AACTCTTGAAAAAGAGACTCAACAGCGACGGAGGTC...CACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp TCCATTAGCCACAGGCCAGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGGTCCACAGTGGTGCTTaGGTTTCTGGAGATTTCAGT +
Preference number: 4 (lower is better)
Translates to: SISHRPDGPGGRATAVRWVHSGA*VSGDFS
Trigger: ACTGAAATCTCCAGAAACTCAAGCACCACTGTGGAC...CCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCTGGCCTGTGGCTAATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp CACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAGGCGTGCTACTGCAGTaGGATGGTGCACTACTGCAG +
Preference number: 4 (lower is better)
Translates to: HTPFHLSGPGLSARNHMSGVLLQ*DGALLQ
Trigger: CTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCC...TGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp ACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGGGGTCCTAGGGAATTaGAGCTCCAGCTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TPLFTLAGQASQPETICQGVLGN*SSSLGS
Trigger: GGACCCCAAGCTGGAGCTGCAATTCCCTAGGACCCC...TTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CATTCTTGGAGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGGGCCAGGCACTAGCGGCATTCCTTaGCCCACTTCCTCAGACTGC +
Preference number: 4 (lower is better)
Translates to: HSWSRLLCHTPFHLSGPGTSGIP*PTSSDC
Trigger: GCAGTCTGAGGAAGTGGGGCAAGGAATGCCGCTAGT...GCCTGGCCCGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCAAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp GACTTAGCCTATGAGATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTGAGATGGTGCACTACTaGAGTGAGGTGGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: DLAYEMEQARDSLCRVGGEMVHY*SEVAQG
Trigger: GCCCTGCGCCACCTCACTGCAGTAGTGCACCATCTC...ACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTCATAGGCTAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp GTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCCTTTGCCACAGTCCAGGCAGGACGCTaGCAGGAATGGCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: VGGYIPTASILGVGSFATVQAGR*QEWPPW
Trigger: CCAGGGTGGCCATTCCTGCCAGCGTCCTGCCTGGAC...TGTGGCAAAGGAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGAGATCGATCGGGGTGTACGTTaGGCTGGGGGAGACCAGCAC +
Preference number: 4 (lower is better)
Translates to: LFTLAGQASQPETICQEIDRGVR*AGGDQH
Trigger: GTGCTGGTCTCCCCCAGCCCAACGTACACCCCGATC...GATCTCTTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp GACTTAGCCTATGAGATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTAGAAGCCCAGGGGAGTaGAGTCTGGAAGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: DLAYEMEQARDSLCRVGGRSPGE*SLEGSP
Trigger: GGGAGACCCTTCCAGACTCCACTCCCCTGGGCTTCT...ACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTCATAGGCTAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp ACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAATTTCCAGGGCAGTCTTaGGGGCACCAGCCACTGCAC +
Preference number: 4 (lower is better)
Translates to: TPLFTLAGQASQPETICQFPGQS*GHQPLH
Trigger: GTGCAGTGGCTGGTGCCCCCAAGACTGCCCTGGAAA...TTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp CCAGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGGATCTCAATGATTCCTaGTTCTCCTCTTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PDGPGGRATAVRWCTTAVDLNDS*FSSSRS
Trigger: ACTCCTGGAAGAGGAGAATCAGGAATCATTGAGATC...CACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp GAGATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTTATATTCCTACATTGAGGTGCGCCAGCTaGTGCCGACCTTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: EMEQARDSLCRVGGYIPTLRCAS*CRPSRT
Trigger: GGTCCTGGAAGGTCGGCAGCAGCTGGCGCACCTCAA...TGTAGGAATATAACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp AGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCTTTCCTGCTGCAAGCTaGTTACCACTTTGCCCTCTA +
Preference number: 4 (lower is better)
Translates to: SRLLCHTPFHLSGPGLSAFPAAS*LPLCPL
Trigger: TAGAGGGCAAAGTGGTAAGCAGCTTGCAGCAGGAAA...GGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCCTTTGCCCACCTCTGCACATCTaGAGACTGCGGCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QGGRLYSYSLHSWSRLLCPPLHI*RLRQLL
Trigger: CAGGAGCTGCCGCAGTCTGCAGATGTGCAGAGGTGG...GCAAAGGAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp AGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGCCTCAGATTCAGCTCTaGCTCATCCTCATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: RRPRRACYCSEMVHYCSEPQIQL*LILIFH
Trigger: GTGGAAAATGAGGATGAGGCAGAGCTGAATCTGAGG...CTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CCTTTGCAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCAAGACGCCGGCCCTCTaGGGTCCTAGGGAATTGCAG +
Preference number: 4 (lower is better)
Translates to: PLQGGRLYSYSLHSWSRLKTPAL*GPRELQ
Trigger: CTGCAATTCCCTAGGACCCCAGAGGGCCGGCGTCTT...GAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTGCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp GGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGTGGTTTTCCAAAGGAACCTaGGAGTCCTGGATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GPGGRATAVRWCTTAVRWFSKGT*ESWISF
Trigger: GAAGGAAATCCAGGACTCCCAGGTTCCTTTGGAAAA...CCACCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp AGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCTTCTGGAGTCCACAGTaGTGCTTGAGTTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SRLLCHTPFHLSGPGLSAFWSPQ*CLSFWR
Trigger: TCTCCAGAAACTCAAGCACCACTGTGGACTCCAGAA...GGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CCAGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGCTTGTCTACCTCCTCTaGAGATCTCAAATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PDGPGGRATAVRWCTTAVLVYLL*RSQILQ
Trigger: CTGGAGAATTTGAGATCTCCAGAGGAGGTAGACAAG...CACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGAGATCGTAAGTTACCCCTCCCTTCACACTaGCTCCCTCAACCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSGPGLSARNHMSRDRKLPLPSH*LPQPGL
Trigger: GAGGCCTGGTTGAGGGAGCCAGTGTGAAGGGAGGGG...TAACTTACGATCTCTTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp AACCATATGTCAAGAGATCGTAAGTTAAGAGTGCTGCTCCTGAGCAGGGAGCGGCCCCAACATGACCTCTaGGGAGGCTTGGTCACCCCC +
Preference number: 4 (lower is better)
Translates to: NHMSRDRKLRVLLLSRERPQHDL*GGLVTP
Trigger: GGGGGTGACCAAGCCTCCCCAGAGGTCATGTTGGGG...CCGCTCCCTGCTCAGGAGCAGCACTCTTAACTTACGATCTCTTGACATATGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CCTTTGCAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCGCATCACTTCCAGTGTaGCCCAGGGTCTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PLQGGRLYSYSLHSWSRLASLPV*PRVSAG
Trigger: CCCTGCTGAGACCCTGGGCCACACTGGAAGTGATGC...GAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTGCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CCAGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGATTCCCTTTGCAGGGTaGGAGGTTATATTCCTACAG +
Preference number: 4 (lower is better)
Translates to: PDGPGGRATAVRWCTTAVIPFAG*EVIFLQ
Trigger: CTGTAGGAATATAACCTCCCACCCTGCAAAGGGAAT...CACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp ACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAATTGAGCTCCCACATCTaGAACGACTCCTCCCCCATG +
Preference number: 4 (lower is better)
Translates to: TPLFTLAGQASQPETICQLSSHI*NDSSPM
Trigger: CATGGGGGAGGAGTCGTTTCAGATGTGGGAGCTCAA...TTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp GGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGTGGCGCAGGGACCTCAGTGATTTGTaGTTCTCTGTTTCTAGAGGT +
Preference number: 4 (lower is better)
Translates to: GGRATAVRWCTTAVRWRRDLSDL*FSVSRG
Trigger: ACCTCTAGAAACAGAGAATCACAAATCACTGAGGTC...CCTGCGCCACCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp GGGAGTCAGCACATGGGAGTGCCGTCACCTCCATTAGCCACAGGCCAGACGGCCCTACGCTCTCTTCTTTaGGTGACTTTAAGAACTCTT +
Preference number: 4 (lower is better)
Translates to: GSQHMGVPSPPLATGQTALRSLL*VTLRTL
Trigger: AAGAGTTCTTAAAGTCACTCAAAGAAGAGAGCGTAG...GGCCGTCTGGCCTGTGGCTAATGGAGGTGACGGCACTCCCATGTGCTGACTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp AGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGGATTCATTGCCCCCTaGTTTATTTCTTCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: RRPRRACYCSEMVHYCSEGFIAP*FISSGV
Trigger: GACTCCAGAAGAAATAAATCAGGGGGCAATGAATCC...CTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp CACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCACTCCTTCCCTCTGAGTaGACTTCAGGAACTGACCCT +
Preference number: 4 (lower is better)
Translates to: HTPFHLSGPGLSARNHMSLLPSE*TSGTDP
Trigger: AGGGTCAGTTCCTGAAGTTCACTCAGAGGGAAGGAG...TGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp ATGAGATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTTATATTCCTACTCGCGCTCCAGCTCTaGCACCTGGCTACTCAGCCA +
Preference number: 4 (lower is better)
Translates to: MRWSRQEIPFAGWEVIFLLALQL*HLATQP
Trigger: TGGCTGAGTAGCCAGGTGGCAGAGCTGGAGCGCGAG...TAGGAATATAACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp GTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCCTTTGCCACAAGGGACATCTTGAGGTaGGCCAGCTGCTGCCGACCT +
Preference number: 4 (lower is better)
Translates to: VGGYIPTASILGVGSFATRDILR*ASCCRP
Trigger: AGGTCGGCAGCAGCTGGCGCACCTCAAGATGTCCCT...TGTGGCAAAGGAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCCTTTGCACCAACCCCCAGATTTaGCCTTCACCTTCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: QGGRLYSYSLHSWSRLLCTNPQI*PSPSPR
Trigger: CCGAGGGGAAGGTGAAGGGCAAATCTGGGGGTTGGT...GCAAAGGAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGAGATCGTAAGTTATGCACATCTGCAGACTaGGGCAGCTCCTGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LSGPGLSARNHMSRDRKLCTSAD*GSSCPS
Trigger: GGAGGGACAGGAGCTGCCGCAGTCTGCAGATGTGCA...TAACTTACGATCTCTTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGAGATCGCCTCCACAGCCAGCTaGAACTTTTCAGTAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LFTLAGQASQPETICQEIASTAS*NFSVAR
Trigger: GCGGGCTACTGAAAAGTTCCAGCTGGCTGTGGAGGC...GATCTCTTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp AGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGAGTGTCTCATGGCTCTaGTTTTCCAGAGTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RRPRRACYCSEMVHYCSESVSWL*FSRVFS
Trigger: ACTGAAGACTCTGGAAAACCAGAGCCATGAGACACT...CTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp AGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGCCTGTAGGCTTAAGTTaGCCTACAGCCTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: RRPRRACYCSEMVHYCSEPVGLS*PTASFS
Trigger: AGAAAAAGAGGCTGTAGGCCAACTTAAGCCTACAGG...CTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCCTTTGCCAGCAGACTCACCCATaGCAGGCTCTGACCCCAACA +
Preference number: 4 (lower is better)
Translates to: QGGRLYSYSLHSWSRLLCQQTHP*QALTPT
Trigger: TGTTGGGGTCAGAGCCTGCCATGGGTGAGTCTGCTG...GCAAAGGAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGAGATCGTAAGTTACCATCACCTCTTCCCTaGTCAGATGGCCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LSGPGLSARNHMSRDRKLPSPLP*SDGLGP
Trigger: GGGACCCAGGCCATCTGACCAGGGAAGAGGTGATGG...TAACTTACGATCTCTTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp ACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAACTCCTCTTCCAGGGGTaGTTCCATCACCTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TPLFTLAGQASQPETICQLLFQG*FHHLFP
Trigger: AGGGAAGAGGTGATGGAACCACCCCTGGAAGAGGAG...TTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp AACCATATGTCAAGAGATCGTAAGTTAAGAGTGCTGCTCCTGAGCAGGGAGCGGGGGGGAGACCAGCACTaGTGGTACATCCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: NHMSRDRKLRVLLLSRERGGDQH*WYILLS
Trigger: GCTGAGGAGGATGTACCACCAGTGCTGGTCTCCCCC...CCGCTCCCTGCTCAGGAGCAGCACTCTTAACTTACGATCTCTTGACATATGGTT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGAGATCAATGATGTCTGCCCCTaGGCCTGCATCCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: LFTLAGQASQPETICQEINDVCP*ACILHP
Trigger: GGGATGGAGGATGCAGGCCCAGGGGCAGACATCATT...GATCTCTTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp AACCATATGTCAAGAGATCGTAAGTTAAGAGTGCTGCTCCTGAGCAGGGAGCGGTCCATCCTGCTCGTCTaGCCCACTGAGGATGGACAG +
Preference number: 4 (lower is better)
Translates to: NHMSRDRKLRVLLLSRERSILLV*PTEDGQ
Trigger: CTGTCCATCCTCAGTGGGTCAGACGAGCAGGATGGA...CCGCTCCCTGCTCAGGAGCAGCACTCTTAACTTACGATCTCTTGACATATGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp AACCATATGTCAAGAGATCGTAAGTTAAGAGTGCTGCTCCTGAGCAGGGAGCGGCCAGGAGGGCTTTCCTaGGCCAGTTCTTGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: NHMSRDRKLRVLLLSRERPGGLS*ASSWSF
Trigger: GAAGGACCAAGAACTGGCTCAGGAAAGCCCTCCTGG...CCGCTCCCTGCTCAGGAGCAGCACTCTTAACTTACGATCTCTTGACATATGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp CAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCCTTTGCCCCATTCACATGCTGTaGCTTCCCCTCCAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: QGGRLYSYSLHSWSRLLCPIHML*LPLQVG
Trigger: CCCAACTTGGAGGGGAAGTCACAGCATGTGAATGGG...GCAAAGGAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCCTTTGCGCATTCAGCTCTCCCTaGTCTACCACCTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QGGRLYSYSLHSWSRLLCAFSSP*STTSSF
Trigger: GAAGGAGGAGGTGGTAGAGCAGGGAGAGCTGAATGC...GCAAAGGAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAACTTTCTTCCTCATCTaGAAACCCATCGGACTCCCC +
Preference number: 4 (lower is better)
Translates to: HTPFHLSGPGLSARNHMSTFFLI*KPIGLP
Trigger: GGGGAGTCCGATGGGTTTGCAGATGAGGAAGAAAGT...TGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp AACCATATGTCAAGAGATCGTAAGTTAAGAGTGCTGCTCCTGAGCAGGGAGCGGCTCCCACCCTGTGTCTaGAGCAGAGAGAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: NHMSRDRKLRVLLLSRERLPPCV*SRERGA
Trigger: TGCTCCTCTCTCTCTGCTCCAGACACAGGGTGGGAG...CCGCTCCCTGCTCAGGAGCAGCACTCTTAACTTACGATCTCTTGACATATGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp TTGAAGCGGAGGCATTACTTTATTCAGGCAGGGACTAGCCAGGCAGGGCCACAGCTCATCCCCTACTTCTaGAGATCTCAGTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LKRRHYFIQAGTSQAGPQLIPYF*RSQWLL
Trigger: CAAGAGCCACTGAGATCTCCAGAAGTAGGGGATGAG...CTGTGGCCCTGCCTGGCTAGTCCCTGCCTGAATAAAGTAATGCCTCCGCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CATTCTTGGAGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGGGCCAGGCGGTCTAGCTATCTCCTaGTCAAGAGACTTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: HSWSRLLCHTPFHLSGPGGLAIS*SRDFSG
Trigger: ACCACTGAAGTCTCTTGACCAGGAGATAGCTAGACC...GCCTGGCCCGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCAAGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp AACCATATGTCAAGAGATCGTAAGTTAAGAGTGCTGCTCCTGAGCAGGGAGCGGCATCCTCCATCCCACTaGGGATCTCTAGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: NHMSRDRKLRVLLLSRERHPPSH*GSLEGQ
Trigger: CTGGCCCTCTAGAGATCCCCAGTGGGATGGAGGATG...CCGCTCCCTGCTCAGGAGCAGCACTCTTAACTTACGATCTCTTGACATATGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp GTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCCTTTGCCACATCCAGCTTGGGGTCCTaGAAGCTGAGGGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: VGGYIPTASILGVGSFATSSLGS*KLREVL
Trigger: CAAGACTTCCCTCAGCTTTCAGGACCCCAAGCTGGA...TGTGGCAAAGGAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp CAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCCTTTGCCTCCAGAGACCTCAGTaGCTCTTGGTACTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: QGGRLYSYSLHSWSRLLCLQRPQ*LLVLSL
Trigger: AAGGGAGAGTACCAAGAGTCACTGAGGTCTCTGGAG...GCAAAGGAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CCTTTGCAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCGACCTCAGTGACTCTTaGTACTCTCCCTTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PLQGGRLYSYSLHSWSRLDLSDS*YSPFPR
Trigger: CCTGGGAAAGGGAGAGTACCAAGAGTCACTGAGGTC...GAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTGCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp ACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAATACAGCCTCCATTCTTaGAGTAGGCTCCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: TPLFTLAGQASQPETICQYSLHS*SRLLCH
Trigger: GTGGCAAAGGAGCCTACTCCAAGAATGGAGGCTGTA...TTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp CGGAGGCATTACTTTATTCAGGCAGGGACTAGCCAGGCAGGGCCACAGCGTGGCGATTTCATTAGTTCTTaGTTCTCCTTTTGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: RRHYFIQAGTSQAGPQRGDFISS*FSFCRD
Trigger: ATCCCTGCAAAAGGAGAATCAAGAACTAATGAAATC...GCCACGCTGTGGCCCTGCCTGGCTAGTCCCTGCCTGAATAAAGTAATGCCTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAGCAAGAGATTCCCTTTaGAGGGTGGGAGGTTATATT +
Preference number: 4 (lower is better)
Translates to: HTPFHLSGPGLSARNHMSARDSL*RVGGYI
Trigger: AATATAACCTCCCACCCTGCAAAGGGAATCTCTTGC...TGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp ATGTCAAGAGATCGTAAGTTAAGAGTGCTGCTCCTGAGCAGGGAGCGGGCTTGGGTTCTTAAGAAAGGCTaGCACAGGTGTCTCAAGGGT +
Preference number: 4 (lower is better)
Translates to: MSRDRKLRVLLLSRERAWVLKKG*HRCLKG
Trigger: ACCCTTGAGACACCTGTGCCAGCCTTTCTTAAGAAC...CCAAGCCCGCTCCCTGCTCAGGAGCAGCACTCTTAACTTACGATCTCTTGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAGGTCTCACAATACTCTaGTCCTCTTCTTCTAGAGTC +
Preference number: 4 (lower is better)
Translates to: HTPFHLSGPGLSARNHMSGLTIL*SSSSRV
Trigger: GACTCTAGAAGAAGAGGACCAGAGTATTGTGAGACC...TGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp GTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCCTTTGCCACAGCTACTGCAGTGAGATaGTGCACTACTGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: VGGYIPTASILGVGSFATATAVR*CTTAVR
Trigger: CCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGC...TGTGGCAAAGGAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR TCA 90 bp GATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTTATATTCCTACAGCCCTCTTCCAGGAGTCTaGATGTCTCTTGGTTCACTT +
Preference number: 4 (lower is better)
Translates to: DGAGKRFPLQGGRLYSYSPLPGV*MSLGSL
Trigger: AAGTGAACCAAGAGACATTCAGACTCCTGGAAGAGG...GCTGTAGGAATATAACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp TATCGGGATTCAGCTGACTTAGCCTATGAGATGGAGCAGGCAAGAGATTCCCTTAGTTGGGCTCAGGACTaGGAGCAAAGATCCAAGACG +
Preference number: 4 (lower is better)
Translates to: YRDSADLAYEMEQARDSLSWAQD*EQRSKT
Trigger: CGTCTTGGATCTTTGCTCCCAGTCCTGAGCCCAACT...AAGGGAATCTCTTGCCTGCTCCATCTCATAGGCTAAGTCAGCTGAATCCCGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CCTTTGCAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCTCCTTTTGCAGGGATTaGAATGTCTGTGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PLQGGRLYSYSLHSWSRLSFCRD*NVCVSS
Trigger: AGAGGACACACAGACATTGCAATCCCTGCAAAAGGA...GAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTGCAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp GTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCCTTTGCCACAGGAACCTGGGAGTCCTaGATTTCCTTCCTGTTTAGA +
Preference number: 4 (lower is better)
Translates to: VGGYIPTASILGVGSFATGTWES*ISFLFR
Trigger: TCTAAACAGGAAGGAAATCCAGGACTCCCAGGTTCC...TGTGGCAAAGGAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CCTTTGCAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCCTTTCTAGTGTCTCATaGCTCTGGTTTTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: PLQGGRLYSYSLHSWSRLLSSVS*LWFSRV
Trigger: GACTCTGGAAAACCAGAGCCATGAGACACTAGAAAG...GAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTGCAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp GACTTAGCCTATGAGATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTCTGATTTATTTCTTCTaGAGTCCACAGTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: DLAYEMEQARDSLCRVGGLIYFF*SPQWCL
Trigger: CAAGCACCACTGTGGACTCCAGAAGAAATAAATCAG...ACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTCATAGGCTAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp CACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCATTCCACAGACTCCAGTaGTTCTTGAATTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: HTPFHLSGPGLSARNHMSFHRLQ*FLNFLF
Trigger: GAAAAGGAAATTCAAGAACCACTGGAGTCTGTGGAA...TGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGAGATCGTAAGTTATCTTCCCATATTTCCTaGTGCAAGCTGCTTACCACT +
Preference number: 4 (lower is better)
Translates to: LSGPGLSARNHMSRDRKLSSHIS*CKLLTT
Trigger: AGTGGTAAGCAGCTTGCAGCAGGAAATATGGGAAGA...TAACTTACGATCTCTTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGAGATCGTAAGTTATGGAGTCCACAGTGGTaGTTGAGTTTCTGGAGATTT +
Preference number: 4 (lower is better)
Translates to: LSGPGLSARNHMSRDRKLWSPQW*LSFWRF
Trigger: AAATCTCCAGAAACTCAAGCACCACTGTGGACTCCA...TAACTTACGATCTCTTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp ACAGCCTCCATTCTTGGAGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGGTTCTCAATGTCTCTTaGTCCTGTTCTTCTAAAGAC +
Preference number: 4 (lower is better)
Translates to: TASILGVGSFATPLFTLAVLNVS*SCSSKD
Trigger: GTCTTTAGAAGAACAGGACCAAGAGACATTGAGAAC...CGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCAAGAATGGAGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp ATGAGATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTTATATTCCTATCCAAGTTGGGACCCTaGCCATTAACACCAATGATG +
Preference number: 4 (lower is better)
Translates to: MRWSRQEIPFAGWEVIFLSKLGP*PLTPMM
Trigger: CATCATTGGTGTTAATGGCCAGGGTCCCAACTTGGA...TAGGAATATAACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp ATGAGATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTTATATTCCTAAGCTGCTTACCACTTTaGCCTCTATGGCTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: MRWSRQEIPFAGWEVIFLSCLPL*PLWLFL
Trigger: AAGAAACAGCCATAGAGGGCAAAGTGGTAAGCAGCT...TAGGAATATAACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp ATGAGATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTTATATTCCTATCCCATATTTCCTGCTaGAAGCTGCTTACCACTTTG +
Preference number: 4 (lower is better)
Translates to: MRWSRQEIPFAGWEVIFLSHISC*KLLTTL
Trigger: CAAAGTGGTAAGCAGCTTGCAGCAGGAAATATGGGA...TAGGAATATAACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR GCA 90 bp CACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAGACTCTAAGTTCTCTTaGAGAGAACTTACTAATTCT +
Preference number: 4 (lower is better)
Translates to: HTPFHLSGPGLSARNHMSDSKFS*RELTNS
Trigger: AGAATTAGTAAGTTCTCTGCAAGAGAACTTAGAGTC...TGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CCA 90 bp GTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCCTTTGCCACAGTCTTCAGTGGCTCCTaGTTCTCTTTTTCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: VGGYIPTASILGVGSFATVFSGS*FSFSRD
Trigger: ATCTCTAGAAAAAGAGAACCAGGAGCCACTGAAGAC...TGTGGCAAAGGAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 90 bp CCGGCCCAGCCGCTCGCGGGCCTGGCCCAGCGACGTCTCCATGTGTaGCACGCGCTCCTGGTAGCCGCGCACTGCCCCGCGCCACGCCTC +
Preference number: 5 (lower is better)
Translates to: PAQPLAGLAQRRLHV*HALLVAAHCPAPRL
Trigger: GAGGCGTGGCGCGGGGCAGTGCGCGGCTACCAGGAGCGCGTGGCACACATGGAGACGTCGCTGGGCCAGGCCCGCGAGCGGCTGGGCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 90 bp TCAGCCAGGCCCGGGCGCATTTCTCTGCCTCGACGGCGCGCCGGTTaGGGGCTACCTCCTCCGTCGTCCGCTCCCGGGCCAGCCGCAGCT +
Preference number: 5 (lower is better)
Translates to: SARPGRISLPRRRAG*GLPPPSSAPGPAAA
Trigger: AGCTGCGGCTGGCCCGGGAGCGGACGACGGAGGAGGTAGCCCGCAACCGGCGCGCCGTCGAGGCAGAGAAATGCGCCCGGGCCTGGCTGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 90 bp CCGCAGCCGCTCCTGCCAGCGGCCCTCCAACCTCTGTTCCAACGCTaGCCTGCGCTCCAGGAGGCCTCCGCGCTCAGCCTGGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PQPLLPAALQPLFQR*PALQEASALSLELL
Trigger: CAGCAGCTCCAGGCTGAGCGCGGAGGCCTCCTGGAGCGCAGGGCAGCGTTGGAACAGAGGTTGGAGGGCCGCTGGCAGGAGCGGCTGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 90 bp TTGCGGGCTACCTCCTCCGTCGTCCGCTCCCGGGCCAGCCGCAGCTaGTGGCATCGGCCTGCCACGCCCTCCAGCTCTTCAGCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LRATSSVVRSRASRS*WHRPATPSSSSARL
Trigger: CAACCTGGCTGAAGAGCTGGAGGGCGTGGCAGGCCGATGCCAGCAGCTGCGGCTGGCCCGGGAGCGGACGACGGAGGAGGTAGCCCGCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 90 bp CAGCGACGTCTCCATGTGTGCCACGCGCTCCTGGTAGCCGCGCACTaGCCCGCGCCACGCCTCGCCCAGTCGCCTTGCCAGCTCCTCTAC +
Preference number: 5 (lower is better)
Translates to: QRRLHVCHALLVAAH*PAPRLAQSPCQLLY
Trigger: GTAGAGGAGCTGGCAAGGCGACTGGGCGAGGCGTGGCGCGGGGCAGTGCGCGGCTACCAGGAGCGCGTGGCACACATGGAGACGTCGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 90 bp GCCTCCACAGCCAGCTGGAACTTTTCAGTAGCCCGCAGCCGCTCCTaGCAGCGGCCCTCCAACCTCTGTTCCAACGCTGCCCTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: ASTASWNFSVARSRS*QRPSNLCSNAALRS
Trigger: GGAGCGCAGGGCAGCGTTGGAACAGAGGTTGGAGGGCCGCTGGCAGGAGCGGCTGCGGGCTACTGAAAAGTTCCAGCTGGCTGTGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp TTAAGAGTGCTGCTCCTGAGCAGGGAGCGGGCTTGGAGGCGTCCTTCCCCTCCCGGATCGGGGTGTACGTaGGGCTGGGGGAGACCAGCA +
Preference number: 5 (lower is better)
Translates to: LRVLLLSRERAWRRPSPPGSGCT*GWGRPA
Trigger: TGCTGGTCTCCCCCAGCCCAACGTACACCCCGATCC...GGGAGGGGAAGGACGCCTCCAAGCCCGCTCCCTGCTCAGGAGCAGCACTCTTAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 90 bp GCTCCCACATCTGAAACGACTCCTCCCCCATGCAGCCCTCCATCCTaGTCGTCTGACCCACTGAGGATGGACAGACGCGGGGCACCGGGA +
Preference number: 5 (lower is better)
Translates to: APTSETTPPPCSPPS*SSDPLRMDRRGAPG
Trigger: TCCCGGTGCCCCGCGTCTGTCCATCCTCAGTGGGTCAGACGAGCAGGATGGAGGGCTGCATGGGGGAGGAGTCGTTTCAGATGTGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp AGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGCTCTTCAGCCAGGTaGTCGCGCGCCACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: SRLLCHTPFHLSGPGLSASSSAR*SRATSA
Trigger: GGCCGAGGTGGCGCGCGACAACCTGGCTGAAGAGCT...GGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp CCAGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGGCCACCGCCAGGTGTTaGCAGCCGGGAGTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: PDGPGGRATAVRWCTTAVATARC*QPGVLS
Trigger: GCTGAGAACTCCCGGCTGCAAACACCTGGCGGTGGC...CACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp CATTCTTGGAGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGGGCCAGGCCTTCTCCCGCCAGCGTaGGTCAACGAGGGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: HSWSRLLCHTPFHLSGPGLLPPA*VNEGPQ
Trigger: CTGCGGGCCCTCGTTGACCAACGCTGGCGGGAGAAG...GCCTGGCCCGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCAAGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp GGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGTGGCGCAGGTGGGGTCCTAGGGAATaGCAGCTCCAGCTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: GGRATAVRWCTTAVRWRRWGPRE*QLQLGV
Trigger: GACCCCAAGCTGGAGCTGCAATTCCCTAGGACCCCA...CCTGCGCCACCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp AGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGAGGCCTCTCTGCTCTTaGGGCTCAGGGCTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: RRPRRACYCSEMVHYCSERPLCS*GSGLSG
Trigger: CCCAGAGAGCCCTGAGCCCAAAGAGCAGAGAGGCCT...CTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CCA 90 bp TCAGCCCGCAGGGGCTCTGGAGCCTGTTTCCTCCCACCCTGTGTCTaGAGCAGAGAGAGAGGAGCATCCTGGGCTCTGATCTCTGCATCT +
Preference number: 5 (lower is better)
Translates to: SARRGSGACFLPPCV*SRERGASWALISAS
Trigger: AGATGCAGAGATCAGAGCCCAGGATGCTCCTCTCTCTCTGCTCCAGACACAGGGTGGGAGGAAACAGGCTCCAGAGCCCCTGCGGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 90 bp AGTGAACTTCAGGAACTGACCCTGGCCCAGGTGAACAGGAGCCCCTaGCCAAGAGGTCTTCAGAGCACTCCCCTCCTCCTCCTGAAAGGG +
Preference number: 5 (lower is better)
Translates to: SELQELTLAQVNRSP*PRGLQSTPLLLLKG
Trigger: CCCTTTCAGGAGGAGGAGGGGAGTGCTCTGAAGACCTCTTGGGCAGGGGCTCCTGTTCACCTGGGCCAGGGTCAGTTCCTGAAGTTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CCA 90 bp AGTTGGGCTCAGGACTGGGAGCAAAGATCCAAGACGCCGGCCCTCTaGGGTCCTAGGGAATTGCAGCTCCAGCTTGGGGTCCTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: SWAQDWEQRSKTPAL*GPRELQLQLGVLKA
Trigger: AGCTTTCAGGACCCCAAGCTGGAGCTGCAATTCCCTAGGACCCCAGAGGGCCGGCGTCTTGGATCTTTGCTCCCAGTCCTGAGCCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CCA 90 bp CAAGCCCTGAACCCTCTTTGCCTCCAAACTCTCCTCTTCCAGGGGTaGTTCCATCACCTCTTCCCTGGTCAGATGGCCTGGGTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: QALNPLCLQTLLFQG*FHHLFPGQMAWVPQ
Trigger: CTGGGGGACCCAGGCCATCTGACCAGGGAAGAGGTGATGGAACCACCCCTGGAAGAGGAGAGTTTGGAGGCAAAGAGGGTTCAGGGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp CTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGAGATCGTAAGTTATCGACGGCGCGCCGGTaGCGGGCTACCTCCTCCGTC +
Preference number: 5 (lower is better)
Translates to: LSGPGLSARNHMSRDRKLSTARR*RATSSV
Trigger: GACGGAGGAGGTAGCCCGCAACCGGCGCGCCGTCGA...TAACTTACGATCTCTTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp CATTCTTGGAGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGGGCCAGGCCATGTCACCCTCCCTTaGGAGAAGCCTCTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: HSWSRLLCHTPFHLSGPGHVTLP*EKPLGH
Trigger: GTGGCCCAGAGGCTTCTCCAAAGGGAGGGTGACATG...GCCTGGCCCGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCAAGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CCA 90 bp ATGGGGGTGCTGGCCAAGGTAGGGGTACGGGCCTGGAGGAATTCTTaGTTCTTAAGAAAGGCTGGCACAGGTGTCTCAAGGGTAGCAGGC +
Preference number: 5 (lower is better)
Translates to: MGVLAKVGVRAWRNS*FLRKAGTGVSRVAG
Trigger: GCCTGCTACCCTTGAGACACCTGTGCCAGCCTTTCTTAAGAACCAAGAATTCCTCCAGGCCCGTACCCCTACCTTGGCCAGCACCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp TCCATTAGCCACAGGCCAGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGCTCCTTTTGCAGGGATaGCAATGTCTGTGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: SISHRPDGPGGRATAVRWLLLQG*QCLCVL
Trigger: GAGGACACACAGACATTGCAATCCCTGCAAAAGGAG...CCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCTGGCCTGTGGCTAATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp CCAGACGGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGGTTCCTGATTCTCCTTaGTCAGAGGTCTCAGTGCCT +
Preference number: 5 (lower is better)
Translates to: PDGPGGRATAVRWCTTAVVPDSP*SEVSVP
Trigger: AGGCACTGAGACCTCTGACAAAGGAGAATCAGGAAC...CACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCCGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp GACTTAGCCTATGAGATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTGTTTCCAGGGCAGTCTaGGGGGCACCAGCCACTGCA +
Preference number: 5 (lower is better)
Translates to: DLAYEMEQARDSLCRVGGVSRAV*GAPATA
Trigger: TGCAGTGGCTGGTGCCCCCAAGACTGCCCTGGAAAC...ACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTCATAGGCTAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp TATCGGGATTCAGCTGACTTAGCCTATGAGATGGAGCAGGCAAGAGATTCCCTTGAGCAGGGAGCGGGCTaGGAGGCGTCCTTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: YRDSADLAYEMEQARDSLEQGAG*EASFPS
Trigger: GGAGGGGAAGGACGCCTCCAAGCCCGCTCCCTGCTC...AAGGGAATCTCTTGCCTGCTCCATCTCATAGGCTAAGTCAGCTGAATCCCGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp GGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGTGGCGCAGGAGACCTCCGTCGCTGTaGAGTCTCTTTTTCAAGAGT +
Preference number: 5 (lower is better)
Translates to: GGRATAVRWCTTAVRWRRRPPSL*SLFFKS
Trigger: ACTCTTGAAAAAGAGACTCAACAGCGACGGAGGTCT...CCTGCGCCACCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp GGCCCAGGAGGGCGTGCTACTGCAGTGAGATGGTGCACTACTGCAGTGAGGTGGAGTCCACAGTGGTGCTaGAGTTTCTGGAGATTTCAG +
Preference number: 5 (lower is better)
Translates to: GPGGRATAVRWCTTAVRWSPQWC*SFWRFQ
Trigger: CTGAAATCTCCAGAAACTCAAGCACCACTGTGGACT...CCACCTCACTGCAGTAGTGCACCATCTCACTGCAGTAGCACGCCCTCCTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp GACTTAGCCTATGAGATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTGCAGGGCTGGTGAGCTaGGGCACAAAAGCCAGCATG +
Preference number: 5 (lower is better)
Translates to: DLAYEMEQARDSLCRVGGAGLVS*GTKASM
Trigger: CATGCTGGCTTTTGTGCCCAAGCTCACCAGCCCTGC...ACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTCATAGGCTAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 90 bp ACTTCCTCAGACTGCTCCAGCCCGTTCATCACTCCCCCATTCACATaGTGTGACTTCCCCTCCAAGTTGGGACCCTGGCCATTAACACCA +
Preference number: 5 (lower is better)
Translates to: TSSDCSSPFITPPFT*CDFPSKLGPWPLTP
Trigger: TGGTGTTAATGGCCAGGGTCCCAACTTGGAGGGGAAGTCACAGCATGTGAATGGGGGAGTGATGAACGGGCTGGAGCAGTCTGAGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp GAGATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTTATATTCCTACACTTTCCAGTCTCCCCTaGAGGGGGTGGCCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: EMEQARDSLCRVGGYIPTLSSLP*RGWPLL
Trigger: GAGCAGAGGCCACCCCCTCAAGGGGAGACTGGAAAG...TGTAGGAATATAACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp CCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGAGGACTTCCCCTCCAAGTaGGGACCCTGGCCATTAACA +
Preference number: 5 (lower is better)
Translates to: PLFTLAGQASQPETICQEDFPSK*GPWPLT
Trigger: TGTTAATGGCCAGGGTCCCAACTTGGAGGGGAAGTC...CTCTTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS TCA 90 bp CTCAGACTGCTCCAGCCCGTTCATCACTCCCCCATTCACATGCTGTaGCTTCCCCTCCAAGTTGGGACCCTGGCCATTAACACCAATGAT +
Preference number: 5 (lower is better)
Translates to: LRLLQPVHHSPIHML*LPLQVGTLAINTND
Trigger: ATCATTGGTGTTAATGGCCAGGGTCCCAACTTGGAGGGGAAGTCACAGCATGTGAATGGGGGAGTGATGAACGGGCTGGAGCAGTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp CAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCCTTTGCTACCAACCCCCAGATTaGCCCTTCACCTTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: QGGRLYSYSLHSWSRLLCYQPPD*PFTFPS
Trigger: CGAGGGGAAGGTGAAGGGCAAATCTGGGGGTTGGTA...GCAAAGGAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp CATTCTTGGAGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGGGCCAGGCAAGCTGCTTACCACTTaGCCCTCTATGGCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: HSWSRLLCHTPFHLSGPGKLLTT*PSMAVS
Trigger: AGAAACAGCCATAGAGGGCAAAGTGGTAAGCAGCTT...GCCTGGCCCGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCAAGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp CATTCTTGGAGTAGGCTCCTTTGCCACACCCCTTTTCACCTTAGCGGGCCAGGCAGATCTCAGTGGCTCTaGATTCTCCTTTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: HSWSRLLCHTPFHLSGPGRSQWL*ILLFQS
Trigger: GCTCTGGAAAAGGAGAATCAAGAGCCACTGAGATCT...GCCTGGCCCGCTAAGGTGAAAAGGGGTGTGGCAAAGGAGCCTACTCCAAGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp CCCCTTTTCACCTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGAGGGCAAGAGATTCCCTTaGCAGGGTGGGAGGTTATAT +
Preference number: 5 (lower is better)
Translates to: PLFTLAGQASQPETICQEGKRFP*QGGRLY
Trigger: ATATAACCTCCCACCCTGCAAAGGGAATCTCTTGCC...CTCTTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAGGTGAAAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp ATGAGATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTTATATTCCTAAAGCTGAGGGAAGTCTaGGAGCCACCGCCAGGTGTT +
Preference number: 5 (lower is better)
Translates to: MRWSRQEIPFAGWEVIFLKLREV*EPPPGV
Trigger: AACACCTGGCGGTGGCTCCAAGACTTCCCTCAGCTT...TAGGAATATAACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp AGAGATCGTAAGTTAAGAGTGCTGCTCCTGAGCAGGGAGCGGGCTTGGAGGCGTCTCTTCCAGATTCCTTaGACTTTCCTTGTCTACCTC +
Preference number: 5 (lower is better)
Translates to: RDRKLRVLLLSRERAWRRLFQIP*TFLVYL
Trigger: GAGGTAGACAAGGAAAGTCAAAGGAATCTGGAAGAG...ACGCCTCCAAGCCCGCTCCCTGCTCAGGAGCAGCACTCTTAACTTACGATCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp GATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTTATATTCCTACAGCAGCCCTGAACCCTCTTaGCCTCCAAACTCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: DGAGKRFPLQGGRLYSYSSPEPS*PPNSPL
Trigger: AAGAGGAGAGTTTGGAGGCAAAGAGGGTTCAGGGCT...GCTGTAGGAATATAACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp CCTTTGCAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCGGCCTGGAGGAATTCTaGGTTCTTAAGAAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: PLQGGRLYSYSLHSWSRLGLEEF*VLKKGW
Trigger: CCAGCCTTTCTTAAGAACCAAGAATTCCTCCAGGCC...GAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTGCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS TCA 90 bp CTAAAGGCCTCTTTGTTCTCATCTTCAAGAGACCTCAGGGGTTCCTaGTTCTCCTTTGTCAGAGGTCTCAGTGCCTCCTCATCCCCTACT +
Preference number: 5 (lower is better)
Translates to: LKASLFSSSRDLRGS*FSFVRGLSASSSPT
Trigger: AGTAGGGGATGAGGAGGCACTGAGACCTCTGACAAAGGAGAATCAGGAACCCCTGAGGTCTCTTGAAGATGAGAACAAAGAGGCCTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp CCTTTGCAGGGTGGGAGGTTATATTCCTACAGCCTCCATTCTTGGAGTAGGCTCGAGTCTGAATGTCTCTaGGTTCACTTCCACAGACTC +
Preference number: 5 (lower is better)
Translates to: PLQGGRLYSYSLHSWSRLESECL*VHFHRL
Trigger: GAGTCTGTGGAAGTGAACCAAGAGACATTCAGACTC...GAGCCTACTCCAAGAATGGAGGCTGTAGGAATATAACCTCCCACCCTGCAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 90 bp GATCCTCTTCTTCCCATATTTCCTGCTGCAAGCTGCTTACCACTTTaGCCTCTATGGCTGTTTCTTTCTCTACCAACCCCCAGATTTGCC +
Preference number: 5 (lower is better)
Translates to: DPLLPIFPAASCLPL*PLWLFLSLPTPRFA
Trigger: GGCAAATCTGGGGGTTGGTAGAGAAAGAAACAGCCATAGAGGGCAAAGTGGTAAGCAGCTTGCAGCAGGAAATATGGGAAGAAGAGGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp TTGAAGCGGAGGCATTACTTTATTCAGGCAGGGACTAGCCAGGCAGGGCCACAGTCTACGCTCTCTTCTTaGAGTGACTTTAAGAACTCT +
Preference number: 5 (lower is better)
Translates to: LKRRHYFIQAGTSQAGPQSTLSS*SDFKNS
Trigger: AGAGTTCTTAAAGTCACTCAAAGAAGAGAGCGTAGA...CTGTGGCCCTGCCTGGCTAGTCCCTGCCTGAATAAAGTAATGCCTCCGCTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CCA 90 bp AGGGATTGCAATGTCTGTGTGTCCTCTTTTCCTGTAGGCTTAAGTTaGCCTACAGCCTCTTTTTCTAGAGGTCTCACTACCTCCACATCC +
Preference number: 5 (lower is better)
Translates to: RDCNVCVSSFPVGLS*PTASFSRGLTTSTS
Trigger: GGATGTGGAGGTAGTGAGACCTCTAGAAAAAGAGGCTGTAGGCCAACTTAAGCCTACAGGAAAAGAGGACACACAGACATTGCAATCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp TATCGGGATTCAGCTGACTTAGCCTATGAGATGGAGCAGGCAAGAGATTCCCTTTCCTGTAGGCTTAAGTaGGCCTACAGCCTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: YRDSADLAYEMEQARDSLSCRLK*AYSLFF
Trigger: GAAAAAGAGGCTGTAGGCCAACTTAAGCCTACAGGA...AAGGGAATCTCTTGCCTGCTCCATCTCATAGGCTAAGTCAGCTGAATCCCGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS TCA 90 bp CTCAAATTCTCCAGGTTCCATGCTCCCAGAGATCTCAATGATTCCTaGTTCTCCTCTTCCAGGAGTCTGAATGTCTCTTGGTTCACTTCC +
Preference number: 5 (lower is better)
Translates to: LKFSRFHAPRDLNDS*FSSSRSLNVSWFTS
Trigger: GGAAGTGAACCAAGAGACATTCAGACTCCTGGAAGAGGAGAATCAGGAATCATTGAGATCTCTGGGAGCATGGAACCTGGAGAATTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CCA 90 bp ATCTCCTCTCCCAGAGACTTCAGGGTTTCTTTTTCCAAAGGAACCTaGGAGTCCTGGATTTCCTTCCTGTTTAGATCCTCTTCTTCCCAT +
Preference number: 5 (lower is better)
Translates to: ISSPRDFRVSFSKGT*ESWISFLFRSSSSH
Trigger: ATGGGAAGAAGAGGATCTAAACAGGAAGGAAATCCAGGACTCCCAGGTTCCTTTGGAAAAAGAAACCCTGAAGTCTCTGGGAGAGGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp CTTAGCGGGCCAGGCCTCTCAGCCAGAAACCATATGTCAAGAGATCGTAAGTTATTCTTGATTCTCCTTTaGCAGGGATTGCAATGTCTG +
Preference number: 5 (lower is better)
Translates to: LSGPGLSARNHMSRDRKLFLILL*QGLQCL
Trigger: CAGACATTGCAATCCCTGCAAAAGGAGAATCAAGAA...TAACTTACGATCTCTTGACATATGGTTTCTGGCTGAGAGGCCTGGCCCGCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CCA 90 bp CTCACAATACTCTGGTCCTCTTCTTCTAGAGTCTTCAGTGGCTCCTaGTTCTCTTTTTCTAGAGATCTAAAGGCCTCTTTGTTCTCATCT +
Preference number: 5 (lower is better)
Translates to: LTILWSSSSRVFSGS*FSFSRDLKASLFSS
Trigger: AGATGAGAACAAAGAGGCCTTTAGATCTCTAGAAAAAGAGAACCAGGAGCCACTGAAGACTCTAGAAGAAGAGGACCAGAGTATTGTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS-3UTR CAA 90 bp ATGAGATGGAGCAGGCAAGAGATTCCCTTTGCAGGGTGGGAGGTTATATTCCTATTTCTAGAGGATTCATaGCCCCCTGATTTATTTCTT +
Preference number: 5 (lower is better)
Translates to: MRWSRQEIPFAGWEVIFLFLEDS*PPDLFL
Trigger: AAGAAATAAATCAGGGGGCAATGAATCCTCTAGAAA...TAGGAATATAACCTCCCACCCTGCAAAGGGAATCTCTTGCCTGCTCCATCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CAA 90 bp CTCAGCCAGGCCCGGGCGCATTTCTCTGCCTCGACGGCGCGCCGGTaGCGGGCTACCTCCTCCGTCGTCCGCTCCCGGGCCAGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: LSQARAHFSASTARR*RATSSVVRSRASRS
Trigger: GCTGCGGCTGGCCCGGGAGCGGACGACGGAGGAGGTAGCCCGCAACCGGCGCGCCGTCGAGGCAGAGAAATGCGCCCGGGCCTGGCTGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 72 bp CCGCTCGCGGGCCTGGCCCAGCGACGTCTCCATGTGTaGCACGCGCTCCTGGTAGCCGCGCACTGCCCCGCG +
Preference number: 6 (lower is better)
Translates to: PLAGLAQRRLHV*HALLVAAHCPA
Trigger: CGCGGGGCAGTGCGCGGCTACCAGGAGCGCGTGGCACACATGGAGACGTCGCTGGGCCAGGCCCGCGAGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CCA 72 bp CGCGCCACCTCGGCCGCGTGCTTCTCCCGCCAGCGTTaGTCAACGAGGGCCCGCAGGGCCGCCAGCTCGTCG +
Preference number: 6 (lower is better)
Translates to: RATSAACFSRQR*STRARRAASSS
Trigger: CGACGAGCTGGCGGCCCTGCGGGCCCTCGTTGACCAACGCTGGCGGGAGAAGCACGCGGCCGAGGTGGCGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CAA 72 bp GCGCGCCACCTCGGCCGCGTGCTTCTCCCGCCAGCGTaGGTCAACGAGGGCCCGCAGGGCCGCCAGCTCGTC +
Preference number: 6 (lower is better)
Translates to: ARHLGRVLLPPA*VNEGPQGRQLV
Trigger: GACGAGCTGGCGGCCCTGCGGGCCCTCGTTGACCAACGCTGGCGGGAGAAGCACGCGGCCGAGGTGGCGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CAA 72 bp GCCCGGGCGCATTTCTCTGCCTCGACGGCGCGCCGGTaGCGGGCTACCTCCTCCGTCGTCCGCTCCCGGGCC +
Preference number: 6 (lower is better)
Translates to: ARAHFSASTARR*RATSSVVRSRA
Trigger: GGCCCGGGAGCGGACGACGGAGGAGGTAGCCCGCAACCGGCGCGCCGTCGAGGCAGAGAAATGCGCCCGGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 72 bp CCCGGGCGCATTTCTCTGCCTCGACGGCGCGCCGGTTaGGGGCTACCTCCTCCGTCGTCCGCTCCCGGGCCA +
Preference number: 6 (lower is better)
Translates to: PGRISLPRRRAG*GLPPPSSAPGP
Trigger: TGGCCCGGGAGCGGACGACGGAGGAGGTAGCCCGCAACCGGCGCGCCGTCGAGGCAGAGAAATGCGCCCGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 72 bp CTCCATGTGTGCCACGCGCTCCTGGTAGCCGCGCACTaGCCCGCGCCACGCCTCGCCCAGTCGCCTTGCCAG +
Preference number: 6 (lower is better)
Translates to: LHVCHALLVAAH*PAPRLAQSPCQ
Trigger: CTGGCAAGGCGACTGGGCGAGGCGTGGCGCGGGGCAGTGCGCGGCTACCAGGAGCGCGTGGCACACATGGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 72 bp ACCTCCTCCGTCGTCCGCTCCCGGGCCAGCCGCAGCTaGTGGCATCGGCCTGCCACGCCCTCCAGCTCTTCA +
Preference number: 6 (lower is better)
Translates to: TSSVVRSRASRS*WHRPATPSSSS
Trigger: TGAAGAGCTGGAGGGCGTGGCAGGCCGATGCCAGCAGCTGCGGCTGGCCCGGGAGCGGACGACGGAGGAGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CAA 90 bp AGCTGCTGGCATCGGCCTGCCACGCCCTCCAGCTCTTCAGCCAGGTaGTCGCGCGCCACCTCGGCCGCGTGCTTCTCCCGCCAGCGTTGG +
Preference number: 6 (lower is better)
Translates to: SCWHRPATPSSSSAR*SRATSAACFSRQRW
Trigger: CCAACGCTGGCGGGAGAAGCACGCGGCCGAGGTGGCGCGCGACAACCTGGCTGAAGAGCTGGAGGGCGTGGCAGGCCGATGCCAGCAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 72 bp CACCTGGCTACTCAGCCAGGCCCGGGCGCATTTCTCTaGCTCGACGGCGCGCCGGTTGCGGGCTACCTCCTC +
Preference number: 6 (lower is better)
Translates to: HLATQPGPGAFL*LDGAPVAGYLL
Trigger: GAGGAGGTAGCCCGCAACCGGCGCGCCGTCGAGGCAGAGAAATGCGCCCGGGCCTGGCTGAGTAGCCAGGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 72 bp GCCAGCGGCCCTCCAACCTCTGTTCCAACGCTGCCCTaGGCTCCAGGAGGCCTCCGCGCTCAGCCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: ASGPPTSVPTLP*APGGLRAQPGA
Trigger: AGCTCCAGGCTGAGCGCGGAGGCCTCCTGGAGCGCAGGGCAGCGTTGGAACAGAGGTTGGAGGGCCGCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 72 bp ATTCCCCTCTCTGGGAGCTACTCAGGGCCTGGAGGCTaGCAACAGAAGACCCTGGCCCCCACCGCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: IPLSGSYSGPGG*QQKTLAPTAQP
Trigger: GGGCTGGGCGGTGGGGGCCAGGGTCTTCTGTTGGCAGCCTCCAGGCCCTGAGTAGCTCCCAGAGAGGGGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CCA 72 bp AGGGCTGAGGGGTGGTGCCAAGGAGGCATGGTCCTCTaGGGACTGGCCTGTACTGGCCTCTTGCCGCTGGCC +
Preference number: 6 (lower is better)
Translates to: RAEGWCQGGMVL*GLACTGLLPLA
Trigger: GGCCAGCGGCAAGAGGCCAGTACAGGCCAGTCCCCAGAGGACCATGCCTCCTTGGCACCACCCCTCAGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS TCA 72 bp CCCCATGCAGCCCTCCATCCTGCTCGTCTGACCCACTaGGGATGGACAGACGCGGGGCACCGGGAGAAGGGA +
Preference number: 6 (lower is better)
Translates to: PHAALHPARLTH*GWTDAGHREKG
Trigger: TCCCTTCTCCCGGTGCCCCGCGTCTGTCCATCCTCAGTGGGTCAGACGAGCAGGATGGAGGGCTGCATGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 72 bp GCCAGCTGGAACTTTTCAGTAGCCCGCAGCCGCTCCTaGCAGCGGCCCTCCAACCTCTGTTCCAACGCTGCC +
Preference number: 6 (lower is better)
Translates to: ASWNFSVARSRS*QRPSNLCSNAA
Trigger: GGCAGCGTTGGAACAGAGGTTGGAGGGCCGCTGGCAGGAGCGGCTGCGGGCTACTGAAAAGTTCCAGCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 72 bp CCTCCCTTCACACTGGCTCCCTCAACCAGGCCTCTCTaGTCTTTGGGCTCAGGGCTCTCTGGGTGCCCCTCG +
Preference number: 6 (lower is better)
Translates to: PPFTLAPSTRPL*SLGSGLSGCPS
Trigger: CGAGGGGCACCCAGAGAGCCCTGAGCCCAAAGAGCAGAGAGGCCTGGTTGAGGGAGCCAGTGTGAAGGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CAA 72 bp GTCCTGTACGTGGCCACCTCCAGGCTGAGGGACATCTaGAGGTGCGCCAGCTGCTGCCGACCTTCCAGGACC +
Preference number: 6 (lower is better)
Translates to: VLYVATSRLRDI*RCASCCRPSRT
Trigger: GGTCCTGGAAGGTCGGCAGCAGCTGGCGCACCTCAAGATGTCCCTCAGCCTGGAGGTGGCCACGTACAGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CAA 90 bp CCAGAAGGCTCAGCACTGTCCTGGGACTCCGTTTCCAGGGCAGTCTaGGGGGCACCAGCCACTGCACCCCTCAAGCTGTCATCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: PEGSALSWDSVSRAV*GAPATAPLKLSSQG
Trigger: CCCCTGGGATGACAGCTTGAGGGGTGCAGTGGCTGGTGCCCCCAAGACTGCCCTGGAAACGGAGTCCCAGGACAGTGCTGAGCCTTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 72 bp CAGGAACTGACCCTGGCCCAGGTGAACAGGAGCCCCTaGCCAAGAGGTCTTCAGAGCACTCCCCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: QELTLAQVNRSP*PRGLQSTPLLL
Trigger: GAGGAGGAGGGGAGTGCTCTGAAGACCTCTTGGGCAGGGGCTCCTGTTCACCTGGGCCAGGGTCAGTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CCA 72 bp CCCAGAGGCCAAGGTGAAGGGGCATCACTTCCAGTGTaGCCCAGGGTCTCAGCAGGGAACGCCTCCTCTGCT +
Preference number: 6 (lower is better)
Translates to: PRGQGEGASLPV*PRVSAGNASSA
Trigger: AGCAGAGGAGGCGTTCCCTGCTGAGACCCTGGGCCACACTGGAAGTGATGCCCCTTCACCTTGGCCTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS TCA 72 bp GCCCAAGAGGTCTTCAGAGCACTCCCCTCCTCCTCCTaGAAGGGGCTCCCTCGGTCTCCCTCAGAGACTAGC +
Preference number: 6 (lower is better)
Translates to: AQEVFRALPSSS*KGLPRSPSETS
Trigger: GCTAGTCTCTGAGGGAGACCGAGGGAGCCCCTTTCAGGAGGAGGAGGGGAGTGCTCTGAAGACCTCTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 72 bp TCTGAAACGACTCCTCCCCCATGCAGCCCTCCATCCTaGTCGTCTGACCCACTGAGGATGGACAGACGCGGG +
Preference number: 6 (lower is better)
Translates to: SETTPPPCSPPS*SSDPLRMDRRG
Trigger: CCCGCGTCTGTCCATCCTCAGTGGGTCAGACGAGCAGGATGGAGGGCTGCATGGGGGAGGAGTCGTTTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CCA 72 bp CAGGACTGGGAGCAAAGATCCAAGACGCCGGCCCTCTaGGGTCCTAGGGAATTGCAGCTCCAGCTTGGGGTC +
Preference number: 6 (lower is better)
Translates to: QDWEQRSKTPAL*GPRELQLQLGV
Trigger: GACCCCAAGCTGGAGCTGCAATTCCCTAGGACCCCAGAGGGCCGGCGTCTTGGATCTTTGCTCCCAGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CCA 72 bp CAGCACTGTCCTGGGACTCCGTTTCCAGGGCAGTCTTaGGGGCACCAGCCACTGCACCCCTCAAGCTGTCAT +
Preference number: 6 (lower is better)
Translates to: QHCPGTPFPGQS*GHQPLHPSSCH
Trigger: ATGACAGCTTGAGGGGTGCAGTGGCTGGTGCCCCCAAGACTGCCCTGGAAACGGAGTCCCAGGACAGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CAA 72 bp TCAGCACTGTCCTGGGACTCCGTTTCCAGGGCAGTCTaGGGGGCACCAGCCACTGCACCCCTCAAGCTGTCA +
Preference number: 6 (lower is better)
Translates to: SALSWDSVSRAV*GAPATAPLKLS
Trigger: TGACAGCTTGAGGGGTGCAGTGGCTGGTGCCCCCAAGACTGCCCTGGAAACGGAGTCCCAGGACAGTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CAA 72 bp AAAGCTGAGGGAAGTCTTGGAGCCACCGCCAGGTGTTaGCAGCCGGGAGTTCTCAGCCTCCAGGAGGGTCCT +
Preference number: 6 (lower is better)
Translates to: KAEGSLGATARC*QPGVLSLQEGP
Trigger: AGGACCCTCCTGGAGGCTGAGAACTCCCGGCTGCAAACACCTGGCGGTGGCTCCAAGACTTCCCTCAGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CAA 72 bp AGATCCAAGACGCCGGCCCTCTGGGGTCCTAGGGAATaGCAGCTCCAGCTTGGGGTCCTGAAAGCTGAGGGA +
Preference number: 6 (lower is better)
Translates to: RSKTPALWGPRE*QLQLGVLKAEG
Trigger: TCCCTCAGCTTTCAGGACCCCAAGCTGGAGCTGCAATTCCCTAGGACCCCAGAGGGCCGGCGTCTTGGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 72 bp GACTGCTCCAGCCCGTTCATCACTCCCCCATTCACATaGTGTGACTTCCCCTCCAAGTTGGGACCCTGGCCA +
Preference number: 6 (lower is better)
Translates to: DCSSPFITPPFT*CDFPSKLGPWP
Trigger: TGGCCAGGGTCCCAACTTGGAGGGGAAGTCACAGCATGTGAATGGGGGAGTGATGAACGGGCTGGAGCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CAA 90 bp GATGGGGGTGCTGGCCAAGGTAGGGGTACGGGCCTGGAGGAATTCTaGGTTCTTAAGAAAGGCTGGCACAGGTGTCTCAAGGGTAGCAGG +
Preference number: 6 (lower is better)
Translates to: DGGAGQGRGTGLEEF*VLKKGWHRCLKGSR
Trigger: CCTGCTACCCTTGAGACACCTGTGCCAGCCTTTCTTAAGAACCAAGAATTCCTCCAGGCCCGTACCCCTACCTTGGCCAGCACCCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS TCA 72 bp GTGTCTGGAGCAGAGAGAGAGGAGCATCCTGGGCTCTaGTCTCTGCATCTACAGCAGGAGAGGGTGCCTGAG +
Preference number: 6 (lower is better)
Translates to: VSGAEREEHPGL*SLHLQQERVPE
Trigger: CTCAGGCACCCTCTCCTGCTGTAGATGCAGAGATCAGAGCCCAGGATGCTCCTCTCTCTCTGCTCCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 72 bp CAAGTTGGGACCCTGGCCATTAACACCAATGATGTCTaGCCCTGGGCCTGCATCCTCCATCCCACTGGGGAT +
Preference number: 6 (lower is better)
Translates to: QVGTLAINTNDV*PWACILHPTGD
Trigger: ATCCCCAGTGGGATGGAGGATGCAGGCCCAGGGGCAGACATCATTGGTGTTAATGGCCAGGGTCCCAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS TCA 72 bp CTCCAGCCCGTTCATCACTCCCCCATTCACATGCTGTaGCTTCCCCTCCAAGTTGGGACCCTGGCCATTAAC +
Preference number: 6 (lower is better)
Translates to: LQPVHHSPIHML*LPLQVGTLAIN
Trigger: GTTAATGGCCAGGGTCCCAACTTGGAGGGGAAGTCACAGCATGTGAATGGGGGAGTGATGAACGGGCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CAA 72 bp TCCATCCCACTGGGGATCTCTAGAGGGCCAGGGACTTaGTCCTCCCTCTCCAAGGAAACAGGGTCAGACTCT +
Preference number: 6 (lower is better)
Translates to: SIPLGISRGPGT*SSLSKETGSDS
Trigger: AGAGTCTGACCCTGTTTCCTTGGAGAGGGAGGACAAAGTCCCTGGCCCTCTAGAGATCCCCAGTGGGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CCA 72 bp TTCACATGCTGTGACTTCCCCTCCAAGTTGGGACCCTaGCCATTAACACCAATGATGTCTGCCCCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: FTCCDFPSKLGP*PLTPMMSAPGP
Trigger: AGGCCCAGGGGCAGACATCATTGGTGTTAATGGCCAGGGTCCCAACTTGGAGGGGAAGTCACAGCATGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 72 bp TCTATGGCTGTTTCTTTCTCTACCAACCCCCAGATTTaGCCTTCACCTTCCCCTCGGCATATGCTGAACACT +
Preference number: 6 (lower is better)
Translates to: SMAVSFSTNPQI*PSPSPRHMLNT
Trigger: AGTGTTCAGCATATGCCGAGGGGAAGGTGAAGGGCAAATCTGGGGGTTGGTAGAGAAAGAAACAGCCATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS TCA 72 bp TCTTTGTTCTCATCTTCAAGAGACCTCAGGGGTTCCTaGTTCTCCTTTGTCAGAGGTCTCAGTGCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: SLFSSSRDLRGS*FSFVRGLSASS
Trigger: TGAGGAGGCACTGAGACCTCTGACAAAGGAGAATCAGGAACCCCTGAGGTCTCTTGAAGATGAGAACAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CAA 90 bp ATTCATTGCCCCCTGATTTATTTCTTCTGGAGTCCACAGTGGTGCTaGAGTTTCTGGAGATTTCAGTGTTTCCAGGTTCTCTTGTCCCGC +
Preference number: 6 (lower is better)
Translates to: IHCPLIYFFWSPQWC*SFWRFQCFQVLLSR
Trigger: GCGGGACAAGAGAACCTGGAAACACTGAAATCTCCAGAAACTCAAGCACCACTGTGGACTCCAGAAGAAATAAATCAGGGGGCAATGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CAA 90 bp CCACAGACTCCAGTGGTTCTTGAATTTCCTTTTCTAGAGGATTCATaGCCCCCTGATTTATTTCTTCTGGAGTCCACAGTGGTGCTTGAG +
Preference number: 6 (lower is better)
Translates to: PQTPVVLEFPFLEDS*PPDLFLLESTVVLE
Trigger: CTCAAGCACCACTGTGGACTCCAGAAGAAATAAATCAGGGGGCAATGAATCCTCTAGAAAAGGAAATTCAAGAACCACTGGAGTCTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS TCA 72 bp ATCTCAATGATTCCTGATTCTCCTCTTCCAGGAGTCTaGATGTCTCTTGGTTCACTTCCACAGACTCCAGTG +
Preference number: 6 (lower is better)
Translates to: ISMIPDSPLPGV*MSLGSLPQTPV
Trigger: CACTGGAGTCTGTGGAAGTGAACCAAGAGACATTCAGACTCCTGGAAGAGGAGAATCAGGAATCATTGAGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 72 bp TTCCTGTTTAGATCCTCTTCTTCCCATATTTCCTGCTaGAAGCTGCTTACCACTTTGCCCTCTATGGCTGTT +
Preference number: 6 (lower is better)
Translates to: FLFRSSSSHISC*KLLTTLPSMAV
Trigger: AACAGCCATAGAGGGCAAAGTGGTAAGCAGCTTGCAGCAGGAAATATGGGAAGAAGAGGATCTAAACAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS GCA 72 bp TGCCCCCTGATTTATTTCTTCTGGAGTCCACAGTGGTaGTTGAGTTTCTGGAGATTTCAGTGTTTCCAGGTT +
Preference number: 6 (lower is better)
Translates to: CPLIYFFWSPQW*LSFWRFQCFQV
Trigger: AACCTGGAAACACTGAAATCTCCAGAAACTCAAGCACCACTGTGGACTCCAGAAGAAATAAATCAGGGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CCA 72 bp AATGTCTGTGTGTCCTCTTTTCCTGTAGGCTTAAGTTaGCCTACAGCCTCTTTTTCTAGAGGTCTCACTACC +
Preference number: 6 (lower is better)
Translates to: NVCVSSFPVGLS*PTASFSRGLTT
Trigger: GGTAGTGAGACCTCTAGAAAAAGAGGCTGTAGGCCAACTTAAGCCTACAGGAAAAGAGGACACACAGACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CCA 72 bp CTCTGGTCCTCTTCTTCTAGAGTCTTCAGTGGCTCCTaGTTCTCTTTTTCTAGAGATCTAAAGGCCTCTTTG +
Preference number: 6 (lower is better)
Translates to: LWSSSSRVFSGS*FSFSRDLKASL
Trigger: CAAAGAGGCCTTTAGATCTCTAGAAAAAGAGAACCAGGAGCCACTGAAGACTCTAGAAGAAGAGGACCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368223.4
CDS CCA 72 bp CATTGCCCCCTGATTTATTTCTTCTGGAGTCCACAGTaGTGCTTGAGTTTCTGGAGATTTCAGTGTTTCCAG +
Preference number: 6 (lower is better)
Translates to: HCPLIYFFWSPQ*CLSFWRFQCFQ
Trigger: CTGGAAACACTGAAATCTCCAGAAACTCAAGCACCACTGTGGACTCCAGAAGAAATAAATCAGGGGGCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368223.4