RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NEPRO (Homo sapiens)

Ensembl gene IDs: ENSG00000163608

Ensembl transcript IDs: ENST00000314400.10, ENST00000383675.6, ENST00000460410.5, ENST00000461381.5, ENST00000462295.5, ENST00000464816.1, ENST00000469169.5, ENST00000469809.5, ENST00000470663.1, ENST00000472166.1, ENST00000472637.5, ENST00000472705.5, ENST00000472762.5, ENST00000473284.5, ENST00000486271.5, ENST00000489848.5, ENST00000491121.1, ENST00000494164.5, ENST00000494575.5, ENST00000494891.5, ENST00000496206.5, ENST00000496340.1

Found 728 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTTCAGCCCTGCTTGAAACTGGTTGCCACAGCAGTGACTTTAGTATaGAGGCCAAGAGGATTGGAAGTGACACACAGGAGGTCTCAAACA +
Preference number: 1 (lower is better)
Translates to: VQPCLKLVATAVTLV*RPRGLEVTHRRSQT
Trigger: TGTTTGAGACCTCCTGTGTGTCACTTCCAATCCTCTTGGCCTTCATACTAAAGTCACTGCTGTGGCAACCAGTTTCAAGCAGGGCTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR TCA 90 bp TATTCAGAGGCGGACCTATGTATAATGGAGCCAATAAGACCAAATTaGCCTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCA +
Preference number: 1 (lower is better)
Translates to: YSEADLCIMEPIRPN*PFRCFLAISHPRSS
Trigger: TGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAGGTCAATTTGGTCTTATTGGCTCCATTATACATAGGTCCGCCTCTGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
3UTR TCA 90 bp CTGCTTACTGTTAGGGTAGAGATCAGTTCTATGCACAGTACAGTGTaGGAGTCTCCACTTAGCACTGGTATCTGTAGCACTCTTCCGAGT +
Preference number: 1 (lower is better)
Translates to: LLTVRVEISSMHSTV*ESPLSTGICSTLPS
Trigger: ACTCGGAAGAGTGCTACAGATACCAGTGCTAAGTGGAGACTCTCACACTGTACTGTGCATAGAACTGATCTCTACCCTAACAGTAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR GCA 90 bp TATAATGGAGCCAATAAGACCAAATTGACCTTTCAGGTGTTTCCTTaGTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGG +
Preference number: 1 (lower is better)
Translates to: YNGANKTKLTFQVFP*YLPPPLLIYLKTQW
Trigger: CCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAGGTCAATTTGGTCTTATTGGCTCCATTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
3UTR TCA 90 bp TATGCCATAGAGAAAAGGGGGTACATGAAGGAACATGTGAGACACTaGAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTT +
Preference number: 1 (lower is better)
Translates to: YAIEKRGYMKEHVRH*SHLLRERQECCLQL
Trigger: AAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGTGTCTCACATGTTCCTTCATGTACCCCCTTTTCTCTATGGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR TCA 90 bp TCCTGCACCATACAACTGCCATCTGGATTTCTTCAGAAAGTTGTGTaGAGGACTCAGCCTCTCGGAATCTTTGCACAAAACTTTTGGCAT +
Preference number: 1 (lower is better)
Translates to: SCTIQLPSGFLQKVV*RTQPLGIFAQNFWH
Trigger: ATGCCAAAAGTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCTTCACACAACTTTCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR TCA 90 bp CTTTGTCTCCGTAAAAATTTATTCTGTGATCTTCTCTGTCTCAGATaGTGCTTTGAAGTTTTGATACCTGAGCCACGAAGAAGGTGGTTG +
Preference number: 1 (lower is better)
Translates to: LCLRKNLFCDLLCLR*CFEVLIPEPRRRWL
Trigger: CAACCACCTTCTTCGTGGCTCAGGTATCAAAACTTCAAAGCATCATCTGAGACAGAGAAGATCACAGAATAAATTTTTACGGAGACAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR GCA 90 bp TCATCTGTCTCCTTAATGGTTCCTGATGTACTGTTTTTATTTATTTaGATCACCGTCCACGAATCAGTTTCATTTTCATGGATGCCTCTA +
Preference number: 1 (lower is better)
Translates to: SSVSLMVPDVLFLFI*ITVHESVSFSWMPL
Trigger: TAGAGGCATCCATGAAAATGAAACTGATTCGTGGACGGTGATGCAAATAAATAAAAACAGTACATCAGGAACCATTAAGGAGACAGATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR GCA 90 bp CTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACTTTCAGGTGTTTCCTTaGTATCTCCCACCCCCGCTC +
Preference number: 2 (lower is better)
Translates to: LSGVSLLSPTPAPHLPQDFQVFP*YLPPPL
Trigger: GAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAA...GTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR TCA 90 bp GCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACAACTCCACCACTGGCTaGTTGGAAGAAAACAACTCA +
Preference number: 2 (lower is better)
Translates to: AEQQLAGSQNLHQHQLHHNSTTG*LEENNS
Trigger: TGAGTTGTTTTCTTCCAATCAGCCAGTGGTGGAGTT...GTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469169.5
ENST00000470663.1
3UTR CAA 90 bp GTATTCAGAGGCGGACCTATGTATAATGGAGCCAATAAGACCAAATaGACCTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTC +
Preference number: 2 (lower is better)
Translates to: VFRGGPMYNGANKTK*TFQVFPCYLPPPLL
Trigger: GAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAGGTCAATTTGGTCTTATTGGCTCCATTATACATAGGTCCGCCTCTGAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR TCA 90 bp TCCGAGTCCCTTGAGAGAACTGCTGAATTTCCCTTAAAAGAGTCGACTGCAACTAACTCCACCACTGGCTaGCTGGGGACAACACATACT +
Preference number: 2 (lower is better)
Translates to: SESLERTAEFPLKESTATNSTTG*LGTTHT
Trigger: AGTATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTT...AGTTGCAGTCGACTCTTTTAAGGGAAATTCAGCAGTTCTCTCAAGGGACTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR TCA 90 bp CCACTTAGCACTGGTATCTGTAGCACTCTTCCGAGTCCCTTGAGAGAACTGCTGGGCAAACTAGTACCTTaGGCTTCCAGATGTTTAAGC +
Preference number: 2 (lower is better)
Translates to: PLSTGICSTLPSPLRELLGKLVP*ASRCLS
Trigger: GCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCC...CAGCAGTTCTCTCAAGGGACTCGGAAGAGTGCTACAGATACCAGTGCTAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp AAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCAACTCCACCACTGGCTaGTTGGAAGAAAACAACTCA +
Preference number: 2 (lower is better)
Translates to: KRSNNLQAPKTFINTNSTNSTTG*LEENNS
Trigger: TGAGTTGTTTTCTTCCAATCAGCCAGTGGTGGAGTT...GGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469169.5
ENST00000470663.1
3UTR-3UTR GCA 90 bp TGGCCCCTGTTTATCAGTCTCTGGGAAAGGGCTAATCTGCATCTTTTAGCAACCACTCCTGTGCAATGCTaGACTAAAGCAGCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: WPLFISLWERANLHLLATTPVQC*TKAAPL
Trigger: CAGAGGAGCTGCTTTAGTGCAGCATTGCACAGGAGT...GGTTGCTAAAAGATGCAGATTAGCCCTTTCCCAGAGACTGATAAACAGGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR CCA 90 bp GAAAAGTTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCACACCAACTCCACCACTaGCTGATTGGAAGAAAACAA +
Preference number: 2 (lower is better)
Translates to: EKFCSSSPTSGATTCRLPHQLHH*LIGRKQ
Trigger: TTGTTTTCTTCCAATCAGCCAGTGGTGGAGTTGGTG...TGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAACTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000469169.5
ENST00000470663.1
3UTR-3UTR TCA 90 bp GGTTCAGCCCTGCTTGAAACTGGTTGCCACAGCAGTGACTTTAGTATGAAGGCCCAGAAGATGGGAAAATaGGAGGAGATGAAGATACTC +
Preference number: 2 (lower is better)
Translates to: GSALLETGCHSSDFSMKAQKMGK*EEMKIL
Trigger: GAGTATCTTCATCTCCTCTCATTTTCCCATCTTCTG...GGCCTTCATACTAAAGTCACTGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR TCA 90 bp GTTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCAAACAGGTCTTGAATTaGGCCCTCCAAATTCATGTT +
Preference number: 2 (lower is better)
Translates to: VLQQQSNKRSNNLQAPKTKQVLN*ALQIHV
Trigger: AACATGAATTTGGAGGGCTCAATTCAAGACCTGTTT...GGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR TCA 90 bp GCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAAAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 2 (lower is better)
Translates to: AAVQQAEQQLAGSQNLHQNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...TTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR GCA 90 bp GGTTCAGCCCTGCTTGAAACTGGTTGCCACAGCAGTGACTTTAGTATGAAGGCCTCAAGGAATTACATCTaGTTCTCAAGGGTAGGCTGT +
Preference number: 2 (lower is better)
Translates to: GSALLETGCHSSDFSMKASRNYI*FSRVGC
Trigger: ACAGCCTACCCTTGAGAAGCAGATGTAATTCCTTGA...GGCCTTCATACTAAAGTCACTGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR GCA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATTTTCAGGTGTTTCCTTaGTATCTCCCACCCCCGCTC +
Preference number: 2 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYFQVFP*YLPPPL
Trigger: GAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAA...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR TCA 90 bp CCACTTAGCACTGGTATCTGTAGCACTCTTCCGAGTCCCTTGAGAGAACTGCTGAAACAGGTCTTGAATTaGGCCCTCCAAATTCATGTT +
Preference number: 2 (lower is better)
Translates to: PLSTGICSTLPSPLRELLKQVLN*ALQIHV
Trigger: AACATGAATTTGGAGGGCTCAATTCAAGACCTGTTT...CAGCAGTTCTCTCAAGGGACTCGGAAGAGTGCTACAGATACCAGTGCTAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp TTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTAAACAGGTCTTGAATTaGGCCCTCCAAATTCATGTT +
Preference number: 2 (lower is better)
Translates to: FCSSSPTSGATTCRLPKPKQVLN*ALQIHV
Trigger: AACATGAATTTGGAGGGCTCAATTCAAGACCTGTTT...AGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR TCA 90 bp GCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTTGGTAGTTAAGGGCTaGTTTTCATTACTTGGAAGA +
Preference number: 2 (lower is better)
Translates to: AEQQLAGSQNLHQHQLHHLVVKG*FSLLGR
Trigger: TCTTCCAAGTAATGAAAATCAGCCCTTAACTACCAA...GTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460410.5
ENST00000472637.5
3UTR-3UTR TCA 90 bp TCCGAGTCCCTTGAGAGAACTGCTGAATTTCCCTTAAAAGAGTCGACTGCAACTATCCTAGCGACCTCTTaGAGCAATCCAAACAAAGGC +
Preference number: 2 (lower is better)
Translates to: SESLERTAEFPLKESTATILATS*SNPNKG
Trigger: GCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGAT...AGTTGCAGTCGACTCTTTTAAGGGAAATTCAGCAGTTCTCTCAAGGGACTCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp AAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCGTTCCTATCACTTTCTaGGAAGAATACTTGGTTGTC +
Preference number: 2 (lower is better)
Translates to: KRSNNLQAPKTFINTNSTVPITF*EEYLVV
Trigger: GACAACCAAGTATTCTTCTCAGAAAGTGATAGGAAC...GGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR TCA 90 bp CTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACGTTCCTATCACTTTCTaGGAAGAATACTTGGTTGTC +
Preference number: 2 (lower is better)
Translates to: LSGVSLLSPTPAPHLPQDVPITF*EEYLVV
Trigger: GACAACCAAGTATTCTTCTCAGAAAGTGATAGGAAC...GTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR TCA 90 bp GAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGACAAAACTTTTGGCATaGGGAGTTCCTATCACTTTC +
Preference number: 2 (lower is better)
Translates to: EQQLAGSQNLHQHQLHHWTKLLA*GVPITF
Trigger: GAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGT...CCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR TCA 90 bp TTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTGGCAAACTAGTACCTTaGGCTTCCAGATGTTTAAGC +
Preference number: 2 (lower is better)
Translates to: FPCYLPPPLLIYLKTQWFGKLVP*ASRCLS
Trigger: GCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCC...AAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR GCA 90 bp CCTGTGTGTCCTAATGCCATCAGAAGTGATAAAGTTGGTACTAGGATGTGGGTAACTCCTGTGCAATGCTaGACTAAAGCAGCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: PVCPNAIRSDKVGTRMWVTPVQC*TKAAPL
Trigger: CAGAGGAGCTGCTTTAGTGCAGCATTGCACAGGAGT...TACCCACATCCTAGTACCAACTTTATCACTTCTGATGGCATTAGGACACACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR GCA 90 bp AGATCAGTTCTATGCACAGTACAGTGTGAGAGTCTCCACTTAGCACTGGTATCTACTCCTGTGCAATGCTaGACTAAAGCAGCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: RSVLCTVQCESLHLALVSTPVQC*TKAAPL
Trigger: CAGAGGAGCTGCTTTAGTGCAGCATTGCACAGGAGT...AGATACCAGTGCTAAGTGGAGACTCTCACACTGTACTGTGCATAGAACTGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR GCA 90 bp CTTAGCACTGGTATCTGTAGCACTCTTCCGAGTCCCTTGAGAGAACTGCTGAATTGTGTTTCAGCTGGTTaGAGAAAGCCCTCACATCAA +
Preference number: 2 (lower is better)
Translates to: LSTGICSTLPSPLRELLNCVSAG*RKPSHQ
Trigger: TTGATGTGAGGGCTTTCTGCAACCAGCTGAAACACA...ATTCAGCAGTTCTCTCAAGGGACTCGGAAGAGTGCTACAGATACCAGTGCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATGATTTGGGGGCCACCTaGATCAAAATCACTTGGGCT +
Preference number: 2 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYDLGAT*IKITWA
Trigger: AGCCCAAGTGATTTTGATCCAGGTGGCCCCCAAATC...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR CCA 90 bp GGTTCAGCCCTGCTTGAAACTGGTTGCCACAGCAGTGACTTTAGTATGAAGGCCTTATATAACTGGATTTaGGGGCCACCTGGATCAAAA +
Preference number: 2 (lower is better)
Translates to: GSALLETGCHSSDFSMKALYNWI*GPPGSK
Trigger: TTTTGATCCAGGTGGCCCCCAAATCCAGTTATATAA...GGCCTTCATACTAAAGTCACTGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR CCA 90 bp TATAACTTGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCTTTTTCTTTGAGGAGGGGATaGGGTGGCCCCACACCTCTT +
Preference number: 2 (lower is better)
Translates to: YNLLKARIYSVCVCVCSFSLRRG*GGPTPL
Trigger: AAGAGGTGTGGGGCCACCCCATCCCCTCCTCAAAGA...AAAAGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR TCA 90 bp GGTTCAGCCCTGCTTGAAACTGGTTGCCACAGCAGTGACTTTAGTATGAAGGCCTTCTACTTAGAACACTaGACTAGCCTTGTTAATCAC +
Preference number: 2 (lower is better)
Translates to: GSALLETGCHSSDFSMKAFYLEH*TSLVNH
Trigger: GTGATTAACAAGGCTAGTTCAGTGTTCTAAGTAGAA...GGCCTTCATACTAAAGTCACTGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR TCA 90 bp GTACAGTGTGAGAGTCTCCACTTAGCACTGGTATCTGTAGCACTCTTCCGAGTCCCAATAAGACCAAATTaGCCTTTCAGGTGTTTCCTT +
Preference number: 2 (lower is better)
Translates to: VQCESLHLALVSVALFRVPIRPN*PFRCFL
Trigger: AAGGAAACACCTGAAAGGTCAATTTGGTCTTATTGG...GACTCGGAAGAGTGCTACAGATACCAGTGCTAAGTGGAGACTCTCACACTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR TCA 90 bp TATAACTTGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCTTTTAGTGGGTGGATCCCTTaGGTCCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: YNLLKARIYSVCVCVCSFSGWIP*VQEFET
Trigger: GGTCTCAAACTCCTGGACTCAAGGGATCCACCCACT...AAAAGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR TCA 90 bp AAGTTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAAAAACAGGTCTTGAATTaGGCCCTCCAAATTCATGTT +
Preference number: 2 (lower is better)
Translates to: KFCSSSPTSGATTCRLPKKQVLN*ALQIHV
Trigger: AACATGAATTTGGAGGGCTCAATTCAAGACCTGTTT...TTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAACTT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR TCA 90 bp TTTCTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAACTCCACCACTGGCTaGCTGGGGACAACACATACT +
Preference number: 2 (lower is better)
Translates to: FLWQTSTLSFQMFKPVAFNSTTG*LGTTHT
Trigger: AGTATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTT...AAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR TCA 90 bp AGATCAGTTCTATGCACAGTACAGTGTGAGAGTCTCCACTTAGCACTGGTATCTATGCACAGTACAGTGTaGGAGTCTCCACTTAGCACT +
Preference number: 2 (lower is better)
Translates to: RSVLCTVQCESLHLALVSMHSTV*ESPLST
Trigger: AGTGCTAAGTGGAGACTCTCACACTGTACTGTGCAT...AGATACCAGTGCTAAGTGGAGACTCTCACACTGTACTGTGCATAGAACTGATCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR GCA 90 bp ATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTACTCCTGTGCAATGCTaGACTAAAGCAGCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: ISLKRVDCNFLCGFLCLRTPVQC*TKAAPL
Trigger: CAGAGGAGCTGCTTTAGTGCAGCATTGCACAGGAGT...ACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR GCA 90 bp GAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCAGCGGAGCAACAACTTaGAGGCTCCCAAAACCTTCA +
Preference number: 2 (lower is better)
Translates to: EFPLKESTATFSVVSFVSSGATT*RLPKPS
Trigger: TGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCT...GGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR GCA 90 bp CCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAAAACTTGGTGACATAACCTaGTCACCAGCCCAACCATCA +
Preference number: 2 (lower is better)
Translates to: PLKESTATFSVVSFVSVKLGDIT*SPAQPS
Trigger: TGATGGTTGGGCTGGTGAGCAGGTTATGTCACCAAG...TTTTACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462295.5
3UTR-3UTR CCA 90 bp TATAACTTGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCTTTTCACTGTGCTCCAGCCTaGGCAACAGCACAAGACTCT +
Preference number: 2 (lower is better)
Translates to: YNLLKARIYSVCVCVCSFHCAPA*ATAQDS
Trigger: AGAGTCTTGTGCTGTTGCCCAGGCTGGAGCACAGTG...AAAAGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR CCA 90 bp TTCAGAAAGTTGTGTGAAGGACTCAGCCTCTCGGAATCTTTGCACAAAACTTTTCCACCACTGGCTGACTaGGGACAACACATACTTTGG +
Preference number: 2 (lower is better)
Translates to: FRKLCEGLSLSESLHKTFPPLAD*GQHILW
Trigger: CCAAAGTATGTGTTGTCCCCAGTCAGCCAGTGGTGG...AAAAGTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCTTCACACAACTTTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR TCA 90 bp TGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTAAATGTAGACTGAACTaGAATGAACTCCTGTGCAAT +
Preference number: 2 (lower is better)
Translates to: CFLAISHPRSSFTSRHNGKCRLN*NELLCN
Trigger: ATTGCACAGGAGTTCATTTCAGTTCAGTCTACATTT...ACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR TCA 90 bp TTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTCCAATAAGACCAAATTaGCCTTTCAGGTGTTTCCTT +
Preference number: 2 (lower is better)
Translates to: FPCYLPPPLLIYLKTQWFPIRPN*PFRCFL
Trigger: AAGGAAACACCTGAAAGGTCAATTTGGTCTTATTGG...AAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR CCA 90 bp TGGCCCCTGTTTATCAGTCTCTGGGAAAGGGCTAATCTGCATCTTTTAGCAACCCTCAAGGGTAGGCTGTaGCAGATTTTTCATATTAAC +
Preference number: 2 (lower is better)
Translates to: WPLFISLWERANLHLLATLKGRL*QIFHIN
Trigger: GTTAATATGAAAAATCTGCCACAGCCTACCCTTGAG...GGTTGCTAAAAGATGCAGATTAGCCCTTTCCCAGAGACTGATAAACAGGGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR CCA 90 bp AAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGCACCAACTCCACCACTaGCTGACTGGGGACAACACA +
Preference number: 2 (lower is better)
Translates to: KTLLFFTGCPRSTLFCTLHQLHH*LTGDNT
Trigger: TGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTG...CAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
3UTR CAA 90 bp TCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATAACTaGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCT +
Preference number: 2 (lower is better)
Translates to: SSGKGKNAVYNLAYN*LKARIYSVCVCVCS
Trigger: AGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR CAA 90 bp TTTGCTCCTGCACCATACAACTGCCATCTGGATTTCTTCAGAAAGTaGTGTGAAGGACTCAGCCTCTCGGAATCTTTGCACAAAACTTTT +
Preference number: 2 (lower is better)
Translates to: FAPAPYNCHLDFFRK*CEGLSLSESLHKTF
Trigger: AAAAGTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCTTCACACAACTTTCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGGAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp CTATGCACAGTACAGTGTGAGAGTCTCCACTTAGCACTGGTATCTGTAGCACTCTTCTACTTAGAACACTaGACTAGCCTTGTTAATCAC +
Preference number: 2 (lower is better)
Translates to: LCTVQCESLHLALVSVALFYLEH*TSLVNH
Trigger: GTGATTAACAAGGCTAGTTCAGTGTTCTAAGTAGAA...GAGTGCTACAGATACCAGTGCTAAGTGGAGACTCTCACACTGTACTGTGCATAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp TCCGAGTCCCTTGAGAGAACTGCTGAATTTCCCTTAAAAGAGTCGACTGCAACTCCAATAAGACCAAATTaGCCTTTCAGGTGTTTCCTT +
Preference number: 2 (lower is better)
Translates to: SESLERTAEFPLKESTATPIRPN*PFRCFL
Trigger: AAGGAAACACCTGAAAGGTCAATTTGGTCTTATTGG...AGTTGCAGTCGACTCTTTTAAGGGAAATTCAGCAGTTCTCTCAAGGGACTCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR TCA 90 bp TTGCTCCTGCACCATACAACTGCCATCTGGATTTCTTCAGAAAGTTGTGTGAAGAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 2 (lower is better)
Translates to: LLLHHTTAIWISSESCVKNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...CTTCACACAACTTTCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp GAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAAGGAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 2 (lower is better)
Translates to: EVRHWLNPSDLLKQSKQRNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
3UTR-3UTR TCA 90 bp GAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCTCAAAACTGGTCTCCTaGGTAGCTTTGTGTTTCAGC +
Preference number: 2 (lower is better)
Translates to: EFPLKESTATFSVVSFVSSKLVS*VALCFS
Trigger: GCTGAAACACAAAGCTACTCAGGAGACCAGTTTTGA...GGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR GCA 90 bp GAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCCCTGCACCATACAACTaGCATCTGGATTTCTTCAGA +
Preference number: 2 (lower is better)
Translates to: EFPLKESTATFSVVSFVSPAPYN*HLDFFR
Trigger: TCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGG...GGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp TTAGTTTGTATGACAGGCATTGAAACTCCACTATTCAAGAGCTGCTTACTGTTACCACCACTGGCTGACTaGGGACAACACATACTTTGG +
Preference number: 2 (lower is better)
Translates to: LVCMTGIETPLFKSCLLLPPLAD*GQHILW
Trigger: CCAAAGTATGTGTTGTCCCCAGTCAGCCAGTGGTGG...TAACAGTAAGCAGCTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAAACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR CCA 90 bp GTACAGTGTGAGAGTCTCCACTTAGCACTGGTATCTGTAGCACTCTTCCGAGTCTCTGAGAAGAATACTTaGTTGTCTTTAGTCTGGATT +
Preference number: 2 (lower is better)
Translates to: VQCESLHLALVSVALFRVSEKNT*LSLVWI
Trigger: AATCCAGACTAAAGACAACCAAGTATTCTTCTCAGA...GACTCGGAAGAGTGCTACAGATACCAGTGCTAAGTGGAGACTCTCACACTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR CAA 90 bp GATTTCTTCAGAAAGTTGTGTGAAGGACTCAGCCTCTCGGAATCTTaGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGA +
Preference number: 2 (lower is better)
Translates to: DFFRKLCEGLSLSES*HKTFGMRSSYHFLR
Trigger: TCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCTTCACACAACTTTCTGAAGAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp CCTGTGTGTCCTAATGCCATCAGAAGTGATAAAGTTGGTACTAGGATGTGGGTACCAATAAGACCAAATTaGCCTTTCAGGTGTTTCCTT +
Preference number: 2 (lower is better)
Translates to: PVCPNAIRSDKVGTRMWVPIRPN*PFRCFL
Trigger: AAGGAAACACCTGAAAGGTCAATTTGGTCTTATTGG...TACCCACATCCTAGTACCAACTTTATCACTTCTGATGGCATTAGGACACACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR TCA 90 bp GTTTGTATGACAGGCATTGAAACTCCACTATTCAAGAGCTGCTTACTGTTAGGGAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 2 (lower is better)
Translates to: VCMTGIETPLFKSCLLLGNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...CCCTAACAGTAAGCAGCTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp CTCTGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGATCTTCTCTGTCTCATCCTAGCGACCTCTTaGAGCAATCCAAACAAAGGC +
Preference number: 2 (lower is better)
Translates to: LCGFLCLRKNLFCDLLCLILATS*SNPNKG
Trigger: GCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGAT...GAGACAGAGAAGATCACAGAATAAATTTTTACGGAGACAAAGGAAACCACAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp TTGCTCCTGCACCATACAACTGCCATCTGGATTTCTTCAGAAAGTTGTGTGAAGACAAAACTTTTGGCATaGGGAGTTCCTATCACTTTC +
Preference number: 2 (lower is better)
Translates to: LLLHHTTAIWISSESCVKTKLLA*GVPITF
Trigger: GAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGT...CTTCACACAACTTTCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp CCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAAAAGATGCTTTGAAGTTTTaGTACCTGAGCCACGAAGAA +
Preference number: 2 (lower is better)
Translates to: PLKESTATFSVVSFVSVKDALKF*YLSHEE
Trigger: TTCTTCGTGGCTCAGGTATCAAAACTTCAAAGCATC...TTTTACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR GCA 90 bp TGGTTGCAAATAGACGTTTTTATGCACTCTAGTTTCTTTGGCAAACTAGTACCTACTCCTGTGCAATGCTaGACTAAAGCAGCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: WLQIDVFMHSSFFGKLVPTPVQC*TKAAPL
Trigger: CAGAGGAGCTGCTTTAGTGCAGCATTGCACAGGAGT...AGGTACTAGTTTGCCAAAGAAACTAGAGTGCATAAAAACGTCTATTTGCAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR GCA 90 bp TCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTAGCGGAGCAACAACTTaGAGGCTCCCAAAACCTTCA +
Preference number: 2 (lower is better)
Translates to: SLKTLLFFTGCPRSTLFCSGATT*RLPKPS
Trigger: TGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCT...ACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR GCA 90 bp ATGGTTCCTGATGTACTGTTTTTATTTATTTGCATCACCGTCCACGAATCAGTTAGCGGAGCAACAACTTaGAGGCTCCCAAAACCTTCA +
Preference number: 2 (lower is better)
Translates to: MVPDVLFLFICITVHESVSGATT*RLPKPS
Trigger: TGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCT...AACTGATTCGTGGACGGTGATGCAAATAAATAAAAACAGTACATCAGGAACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR GCA 90 bp TTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGAGCGGAGCAACAACTTaGAGGCTCCCAAAACCTTCA +
Preference number: 2 (lower is better)
Translates to: FFEDSLILYWLSKIHIILSGATT*RLPKPS
Trigger: TGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCT...CAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR CCA 90 bp CTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGATCTTCATCCACCACTGGCTGACTaGGGACAACACATACTTTGG +
Preference number: 2 (lower is better)
Translates to: LILYWLSKIHIILYIDLHPPLAD*GQHILW
Trigger: CCAAAGTATGTGTTGTCCCCAGTCAGCCAGTGGTGG...ATGAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR CCA 90 bp AGAACTGCTGAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGAAGTAAGGCATTaGTTGAATCCTAGCGACCTC +
Preference number: 2 (lower is better)
Translates to: RTAEFPLKESTATFSVVSFEVRH*LNPSDL
Trigger: GAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAA...GGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTCAGCAGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp TCCGAGTCCCTTGAGAGAACTGCTGAATTTCCCTTAAAAGAGTCGACTGCAACTTCTCTTATTCTTTACTaGCTGTCCAAGATCCACATT +
Preference number: 2 (lower is better)
Translates to: SESLERTAEFPLKESTATSLILY*LSKIHI
Trigger: AATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGA...AGTTGCAGTCGACTCTTTTAAGGGAAATTCAGCAGTTCTCTCAAGGGACTCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp AGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGAAGTTTGTTACCCACCAACTCCACCACTaGCTGATTGGAAGAAAACAA +
Preference number: 2 (lower is better)
Translates to: STLSFQMFKPVAFKKFVTHQLHH*LIGRKQ
Trigger: TTGTTTTCTTCCAATCAGCCAGTGGTGGAGTTGGTG...GGTAACAAACTTCTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469169.5
3UTR-3UTR TCA 90 bp TCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCATCCTAGCGACCTCTTaGAGCAATCCAAACAAAGGC +
Preference number: 2 (lower is better)
Translates to: SSLKTLLFFTGCPRSTLFILATS*SNPNKG
Trigger: GCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGAT...GAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
3UTR-3UTR TCA 90 bp CTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGGTTCCTATCACTTTCTaGGAAGAATACTTGGTTGTC +
Preference number: 2 (lower is better)
Translates to: LWQTSTLSFQMFKPVAFKVPITF*EEYLVV
Trigger: GACAACCAAGTATTCTTCTCAGAAAGTGATAGGAAC...CTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp TCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGGGCAAACTAGTACCTTaGGCTTCCAGATGTTTAAGC +
Preference number: 2 (lower is better)
Translates to: STATFSVVSFVSVKIYSVGKLVP*ASRCLS
Trigger: GCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCC...CACAGAATAAATTTTTACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR GCA 90 bp TATAACTTGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCTTTTGGAGGTCTCAAACACTaGTCTTATAAATGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: YNLLKARIYSVCVCVCSFGGLKH*SYKWPV
Trigger: CACAGGCCATTTATAAGAGCAGTGTTTGAGACCTCC...AAAAGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR GCA 90 bp TCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGCCTGCACCATACAACTaGCATCTGGATTTCTTCAGA +
Preference number: 2 (lower is better)
Translates to: STATFSVVSFVSVKIYSVPAPYN*HLDFFR
Trigger: TCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGG...CACAGAATAAATTTTTACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp TATAACTTGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCTTTTAAACAAATGCTAGACTaGCAGCCCAGTCCATGCTAT +
Preference number: 2 (lower is better)
Translates to: YNLLKARIYSVCVCVCSFKQMLD*QPSPCY
Trigger: ATAGCATGGACTGGGCTGCCAGTCTAGCATTTGTTT...AAAAGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR TCA 90 bp GTTTGTATGACAGGCATTGAAACTCCACTATTCAAGAGCTGCTTACTGTTAGGGAAATGTAGACTGAACTaGAATGAACTCCTGTGCAAT +
Preference number: 2 (lower is better)
Translates to: VCMTGIETPLFKSCLLLGKCRLN*NELLCN
Trigger: ATTGCACAGGAGTTCATTTCAGTTCAGTCTACATTT...CCCTAACAGTAAGCAGCTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp TATAACTTGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCTTTTCAGAAGATGGGAAAATaGGAGGAGATGAAGATACTC +
Preference number: 2 (lower is better)
Translates to: YNLLKARIYSVCVCVCSFQKMGK*EEMKIL
Trigger: GAGTATCTTCATCTCCTCTCATTTTCCCATCTTCTG...AAAAGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR TCA 90 bp TCCCTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 2 (lower is better)
Translates to: SLVIQAVANLVDQFQHINNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...GTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR TCA 90 bp TTTCTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTACAAAACTTTTGGCATaGGGAGTTCCTATCACTTTC +
Preference number: 2 (lower is better)
Translates to: FLWQTSTLSFQMFKPVAFTKLLA*GVPITF
Trigger: GAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGT...AAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp ATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTCTTCTCTGTCTCAGATaGTGCTTTGAAGTTTTGATA +
Preference number: 2 (lower is better)
Translates to: ISLKRVDCNFLCGFLCLRLLCLR*CFEVLI
Trigger: TATCAAAACTTCAAAGCATCATCTGAGACAGAGAAG...ACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp TGTTTCAGCTGGTTGCAGAAAGCCCTCACATCAAATTCTGATGACTCTTCTTTGTTGGTAGTTAAGGGCTaGTTTTCATTGGAAGAAAAC +
Preference number: 2 (lower is better)
Translates to: CFSWLQKALTSNSDDSSLLVVKG*FSLEEN
Trigger: GTTTTCTTCCAATGAAAATCAGCCCTTAACTACCAA...CAAAGAAGAGTCATCAGAATTTGATGTGAGGGCTTTCTGCAACCAGCTGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462295.5
ENST00000473284.5
3UTR-3UTR GCA 90 bp CTCTGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGATCTTCTCTGTCTCTCAAGGAATTACATCTaGTTCTCAAGGGTAGGCTGT +
Preference number: 2 (lower is better)
Translates to: LCGFLCLRKNLFCDLLCLSRNYI*FSRVGC
Trigger: ACAGCCTACCCTTGAGAAGCAGATGTAATTCCTTGA...GAGACAGAGAAGATCACAGAATAAATTTTTACGGAGACAAAGGAAACCACAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
3UTR-3UTR CCA 90 bp TTAGTATTCAGAGGCGGACCTATGTATAATGGAGCCAATAAGACCAAATTGACCCTCAAGGGTAGGCTGTaGCAGATTTTTCATATTAAC +
Preference number: 2 (lower is better)
Translates to: LVFRGGPMYNGANKTKLTLKGRL*QIFHIN
Trigger: GTTAATATGAAAAATCTGCCACAGCCTACCCTTGAG...GGTCAATTTGGTCTTATTGGCTCCATTATACATAGGTCCGCCTCTGAATACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR CCA 90 bp TATAACTTGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCTTTTTCTGTTATGATAGGGTaGCTGAGGAAAAGAAGGATG +
Preference number: 2 (lower is better)
Translates to: YNLLKARIYSVCVCVCSFSVMIG*LRKRRM
Trigger: CATCCTTCTTTTCCTCAGCCACCCTATCATAACAGA...AAAAGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR CCA 90 bp GTTTGTATGACAGGCATTGAAACTCCACTATTCAAGAGCTGCTTACTGTTAGGGTTTGCACAAAACTTTTaGCATGAGGAGTTCCTATCA +
Preference number: 2 (lower is better)
Translates to: VCMTGIETPLFKSCLLLGFAQNF*HEEFLS
Trigger: TGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAA...CCCTAACAGTAAGCAGCTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp CTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGTTTGCACAAAACTTTTaGCATGAGGAGTTCCTATCA +
Preference number: 2 (lower is better)
Translates to: LWQTSTLSFQMFKPVAFKFAQNF*HEEFLS
Trigger: TGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAA...CTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp TTAGTATTCAGAGGCGGACCTATGTATAATGGAGCCAATAAGACCAAATTGACCTTCTACTTAGAACACTaGACTAGCCTTGTTAATCAC +
Preference number: 2 (lower is better)
Translates to: LVFRGGPMYNGANKTKLTFYLEH*TSLVNH
Trigger: GTGATTAACAAGGCTAGTTCAGTGTTCTAAGTAGAA...GGTCAATTTGGTCTTATTGGCTCCATTATACATAGGTCCGCCTCTGAATACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR TCA 90 bp AGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGAAGTTTGTTACCTTCTACTTAGAACACTaGACTAGCCTTGTTAATCAC +
Preference number: 2 (lower is better)
Translates to: STLSFQMFKPVAFKKFVTFYLEH*TSLVNH
Trigger: GTGATTAACAAGGCTAGTTCAGTGTTCTAAGTAGAA...GGTAACAAACTTCTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp AAATCAACCTTTTTAAGACACCTTTATAGAGAACCCATAACCTGCTCACCAGCCTTCTACTTAGAACACTaGACTAGCCTTGTTAATCAC +
Preference number: 2 (lower is better)
Translates to: KSTFLRHLYREPITCSPAFYLEH*TSLVNH
Trigger: GTGATTAACAAGGCTAGTTCAGTGTTCTAAGTAGAA...GGCTGGTGAGCAGGTTATGGGTTCTCTATAAAGGTGTCTTAAAAAGGTTGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR TCA 90 bp TATAACTTGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCTTTTCCCTGGTTTTTCCAATaGAAGATAAGCTCCAAAGTT +
Preference number: 2 (lower is better)
Translates to: YNLLKARIYSVCVCVCSFPWFFQ*KISSKV
Trigger: AACTTTGGAGCTTATCTTTCATTGGAAAAACCAGGG...AAAAGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR TCA 90 bp CTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGATCTTCAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 2 (lower is better)
Translates to: LLFFTGCPRSTLFCTLIFNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...GAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000494164.5
3UTR-3UTR TCA 90 bp CTATCACTTTCTGAGAAGAATACTTGGTTGTCTTTAGTCTGGATTGAGAACATTGGCAAACTAGTACCTTaGGCTTCCAGATGTTTAAGC +
Preference number: 2 (lower is better)
Translates to: LSLSEKNTWLSLVWIENIGKLVP*ASRCLS
Trigger: GCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCC...AATGTTCTCAATCCAGACTAAAGACAACCAAGTATTCTTCTCAGAAAGTGATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR GCA 90 bp CTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACAAGTCAAGGAATTACATCTaGTTCTCAAGGGTAGGCTGT +
Preference number: 2 (lower is better)
Translates to: LVIQAVANLVDQFQHINKSRNYI*FSRVGC
Trigger: ACAGCCTACCCTTGAGAAGCAGATGTAATTCCTTGA...CTTGTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR GCA 90 bp TTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTCAAGGAATTACATCTaGTTCTCAAGGGTAGGCTGT +
Preference number: 2 (lower is better)
Translates to: FFEDSLILYWLSKIHIILSRNYI*FSRVGC
Trigger: ACAGCCTACCCTTGAGAAGCAGATGTAATTCCTTGA...CAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR GCA 90 bp CTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGATCTTCTCAAGGAATTACATCTaGTTCTCAAGGGTAGGCTGT +
Preference number: 2 (lower is better)
Translates to: LLFFTGCPRSTLFCTLIFSRNYI*FSRVGC
Trigger: ACAGCCTACCCTTGAGAAGCAGATGTAATTCCTTGA...GAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR GCA 90 bp CTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGATCTTCATCCTGCACCATACAACTaGCATCTGGATTTCTTCAGA +
Preference number: 2 (lower is better)
Translates to: LILYWLSKIHIILYIDLHPAPYN*HLDFFR
Trigger: TCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGG...ATGAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp TCTCCTTGGTATTGTCTGTATTTTAAGGCACTAAATGGATACTACCACTTGGTATCTGTTATGATAGGGTaGCTGAGGAAAAGAAGGATG +
Preference number: 2 (lower is better)
Translates to: SPWYCLYFKALNGYYHLVSVMIG*LRKRRM
Trigger: CATCCTTCTTTTCCTCAGCCACCCTATCATAACAGA...TACCAAGTGGTAGTATCCATTTAGTGCCTTAAAATACAGACAATACCAAGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR CCA 90 bp CTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACAAGCTGTTTATCAGTCTCTaGGAAAGGGCTAATCTGCAT +
Preference number: 2 (lower is better)
Translates to: LVIQAVANLVDQFQHINKLFISL*ERANLH
Trigger: ATGCAGATTAGCCCTTTCCCAGAGACTGATAAACAG...CTTGTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR CCA 90 bp AAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGTTTGAAGTAAGGCATTaGTTGAATCCTAGCGACCTC +
Preference number: 2 (lower is better)
Translates to: KTLLFFTGCPRSTLFCTLFEVRH*LNPSDL
Trigger: GAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAA...CAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
3UTR-3UTR CCA 90 bp CTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGTCTGAGAAGAATACTTaGTTGTCTTTAGTCTGGATT +
Preference number: 2 (lower is better)
Translates to: LWQTSTLSFQMFKPVAFKSEKNT*LSLVWI
Trigger: AATCCAGACTAAAGACAACCAAGTATTCTTCTCAGA...CTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp TGTTTCAGCTGGTTGCAGAAAGCCCTCACATCAAATTCTGATGACTCTTCTTTGTCTGAGAAGAATACTTaGTTGTCTTTAGTCTGGATT +
Preference number: 2 (lower is better)
Translates to: CFSWLQKALTSNSDDSSLSEKNT*LSLVWI
Trigger: AATCCAGACTAAAGACAACCAAGTATTCTTCTCAGA...CAAAGAAGAGTCATCAGAATTTGATGTGAGGGCTTTCTGCAACCAGCTGAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp GAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGAGCCACGAAGAAGGTaGTTGCAAATAGACGTTTTT +
Preference number: 2 (lower is better)
Translates to: EDSLILYWLSKIHIILYIEPRRR*LQIDVF
Trigger: AAAAACGTCTATTTGCAACCACCTTCTTCGTGGCTC...AATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp TGGTTGCAAATAGACGTTTTTATGCACTCTAGTTTCTTTGGCAAACTAGTACCTGAGCCACGAAGAAGGTaGTTGCAAATAGACGTTTTT +
Preference number: 2 (lower is better)
Translates to: WLQIDVFMHSSFFGKLVPEPRRR*LQIDVF
Trigger: AAAAACGTCTATTTGCAACCACCTTCTTCGTGGCTC...AGGTACTAGTTTGCCAAAGAAACTAGAGTGCATAAAAACGTCTATTTGCAACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp ATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAAGAATGAGCCACGAAGAAGGTaGTTGCAAATAGACGTTTTT +
Preference number: 2 (lower is better)
Translates to: IFAQNFWHEEFLSLSEKNEPRRR*LQIDVF
Trigger: AAAAACGTCTATTTGCAACCACCTTCTTCGTGGCTC...ATTCTTCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp TCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCGAGCCACGAAGAAGGTaGTTGCAAATAGACGTTTTT +
Preference number: 2 (lower is better)
Translates to: SSLKTLLFFTGCPRSTLFEPRRR*LQIDVF
Trigger: AAAAACGTCTATTTGCAACCACCTTCTTCGTGGCTC...GAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp CTCTGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGATCTTCTCTGTCTCAAATGTAGACTGAACTaGAATGAACTCCTGTGCAAT +
Preference number: 2 (lower is better)
Translates to: LCGFLCLRKNLFCDLLCLKCRLN*NELLCN
Trigger: ATTGCACAGGAGTTCATTTCAGTTCAGTCTACATTT...GAGACAGAGAAGATCACAGAATAAATTTTTACGGAGACAAAGGAAACCACAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp GAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTAAACAGGTCTTGAATTaGGCCCTCCAAATTCATGTT +
Preference number: 2 (lower is better)
Translates to: EDSLILYWLSKIHIILYIKQVLN*ALQIHV
Trigger: AACATGAATTTGGAGGGCTCAATTCAAGACCTGTTT...AATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp TGGTTGCAAATAGACGTTTTTATGCACTCTAGTTTCTTTGGCAAACTAGTACCTGTTCCTATCACTTTCTaGGAAGAATACTTGGTTGTC +
Preference number: 2 (lower is better)
Translates to: WLQIDVFMHSSFFGKLVPVPITF*EEYLVV
Trigger: GACAACCAAGTATTCTTCTCAGAAAGTGATAGGAAC...AGGTACTAGTTTGCCAAAGAAACTAGAGTGCATAAAAACGTCTATTTGCAACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp TTAGTTTGTATGACAGGCATTGAAACTCCACTATTCAAGAGCTGCTTACTGTTAGTTCCTATCACTTTCTaGGAAGAATACTTGGTTGTC +
Preference number: 2 (lower is better)
Translates to: LVCMTGIETPLFKSCLLLVPITF*EEYLVV
Trigger: GACAACCAAGTATTCTTCTCAGAAAGTGATAGGAAC...TAACAGTAAGCAGCTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAAACTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp ATGGTTCCTGATGTACTGTTTTTATTTATTTGCATCACCGTCCACGAATCAGTTACAAAACTTTTGGCATaGGGAGTTCCTATCACTTTC +
Preference number: 2 (lower is better)
Translates to: MVPDVLFLFICITVHESVTKLLA*GVPITF
Trigger: GAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGT...AACTGATTCGTGGACGGTGATGCAAATAAATAAAAACAGTACATCAGGAACCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR TCA 90 bp CTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACAAGTTGTATGACAGGCATTaGAACTCCACTATTCAAGAG +
Preference number: 2 (lower is better)
Translates to: LVIQAVANLVDQFQHINKLYDRH*NSTIQE
Trigger: CTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAA...CTTGTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR TCA 90 bp CTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACAAGAAATGTAGACTGAACTaGAATGAACTCCTGTGCAAT +
Preference number: 2 (lower is better)
Translates to: LVIQAVANLVDQFQHINKKCRLN*NELLCN
Trigger: ATTGCACAGGAGTTCATTTCAGTTCAGTCTACATTT...CTTGTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR TCA 90 bp TGGTTGCAAATAGACGTTTTTATGCACTCTAGTTTCTTTGGCAAACTAGTACCTTTGGTAGTTAAGGGCTaGTTTTCATTACTTGGAAGA +
Preference number: 2 (lower is better)
Translates to: WLQIDVFMHSSFFGKLVPLVVKG*FSLLGR
Trigger: TCTTCCAAGTAATGAAAATCAGCCCTTAACTACCAA...AGGTACTAGTTTGCCAAAGAAACTAGAGTGCATAAAAACGTCTATTTGCAACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472637.5
3UTR-3UTR CCA 90 bp TTAGTTTGTATGACAGGCATTGAAACTCCACTATTCAAGAGCTGCTTACTGTTATCTCTTATTCTTTACTaGCTGTCCAAGATCCACATT +
Preference number: 2 (lower is better)
Translates to: LVCMTGIETPLFKSCLLLSLILY*LSKIHI
Trigger: AATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGA...TAACAGTAAGCAGCTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAAACTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp ATGGTTCCTGATGTACTGTTTTTATTTATTTGCATCACCGTCCACGAATCAGTTTTTGCACAAAACTTTTaGCATGAGGAGTTCCTATCA +
Preference number: 2 (lower is better)
Translates to: MVPDVLFLFICITVHESVFAQNF*HEEFLS
Trigger: TGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAA...AACTGATTCGTGGACGGTGATGCAAATAAATAAAAACAGTACATCAGGAACCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp TGGTTGCAAATAGACGTTTTTATGCACTCTAGTTTCTTTGGCAAACTAGTACCTTTTGCACAAAACTTTTaGCATGAGGAGTTCCTATCA +
Preference number: 2 (lower is better)
Translates to: WLQIDVFMHSSFFGKLVPFAQNF*HEEFLS
Trigger: TGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAA...AGGTACTAGTTTGCCAAAGAAACTAGAGTGCATAAAAACGTCTATTTGCAACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp CTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGATCTTCTTTGCACAAAACTTTTaGCATGAGGAGTTCCTATCA +
Preference number: 2 (lower is better)
Translates to: LLFFTGCPRSTLFCTLIFFAQNF*HEEFLS
Trigger: TGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAA...GAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp AAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGTCTGAGAAGAATACTTaGTTGTCTTTAGTCTGGATT +
Preference number: 2 (lower is better)
Translates to: KTLLFFTGCPRSTLFCTLSEKNT*LSLVWI
Trigger: AATCCAGACTAAAGACAACCAAGTATTCTTCTCAGA...CAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp TGGTTGCAAATAGACGTTTTTATGCACTCTAGTTTCTTTGGCAAACTAGTACCTTCTGAGAAGAATACTTaGTTGTCTTTAGTCTGGATT +
Preference number: 2 (lower is better)
Translates to: WLQIDVFMHSSFFGKLVPSEKNT*LSLVWI
Trigger: AATCCAGACTAAAGACAACCAAGTATTCTTCTCAGA...AGGTACTAGTTTGCCAAAGAAACTAGAGTGCATAAAAACGTCTATTTGCAACCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp CTATCACTTTCTGAGAAGAATACTTGGTTGTCTTTAGTCTGGATTGAGAACATTTCTGAGAAGAATACTTaGTTGTCTTTAGTCTGGATT +
Preference number: 2 (lower is better)
Translates to: LSLSEKNTWLSLVWIENISEKNT*LSLVWI
Trigger: AATCCAGACTAAAGACAACCAAGTATTCTTCTCAGA...AATGTTCTCAATCCAGACTAAAGACAACCAAGTATTCTTCTCAGAAAGTGATAG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CCA 90 bp CTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGATCTTCATTCTGAGAAGAATACTTaGTTGTCTTTAGTCTGGATT +
Preference number: 2 (lower is better)
Translates to: LILYWLSKIHIILYIDLHSEKNT*LSLVWI
Trigger: AATCCAGACTAAAGACAACCAAGTATTCTTCTCAGA...ATGAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp TGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTCTTTCAGGTGTTTCCTaGCTATCTCCCACCCCCGCT +
Preference number: 3 (lower is better)
Translates to: CFLAISHPRSSFTSRHNGLSGVS*LSPTPA
Trigger: AGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG...ACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR CAA 90 bp TTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTCTTTCAGGTGTTTCCTaGCTATCTCCCACCCCCGCT +
Preference number: 3 (lower is better)
Translates to: FPCYLPPPLLIYLKTQWFLSGVS*LSPTPA
Trigger: AGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG...AAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR CAA 90 bp CCTGTGTGTCCTAATGCCATCAGAAGTGATAAAGTTGGTACTAGGATGTGGGTAAGGTGGGAGAATAGCTaGAGCCCAGGAGGTGGAGGG +
Preference number: 3 (lower is better)
Translates to: PVCPNAIRSDKVGTRMWVRWENS*SPGGGG
Trigger: CCCTCCACCTCCTGGGCTCAAGCTATTCTCCCACCT...TACCCACATCCTAGTACCAACTTTATCACTTCTGATGGCATTAGGACACACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR GCA 72 bp AGCAAGAGGCAAGGTTCAGCCCTGCTTGAAACTGGTTaGCACAGCAGTGACTTTAGTATGAAGGCCAAGAGG +
Preference number: 3 (lower is better)
Translates to: SKRQGSALLETG*HSSDFSMKAKR
Trigger: CCTCTTGGCCTTCATACTAAAGTCACTGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACCTTGCCTCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR GCA 72 bp TTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTaGAGGCTCCCAAAACCTTCATCAACACCAACTCCA +
Preference number: 3 (lower is better)
Translates to: FCSSSPTSGATT*RLPKPSSTPTP
Trigger: TGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
3UTR-3UTR CAA 90 bp CCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAAAACTTTCAGGTGTTTCCTaGCTATCTCCCACCCCCGCT +
Preference number: 3 (lower is better)
Translates to: PLKESTATFSVVSFVSVKLSGVS*LSPTPA
Trigger: AGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG...TTTTACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR CAA 90 bp CTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACGCCAATAAGACCAAATaGACCTTTCAGGTGTTTCCT +
Preference number: 3 (lower is better)
Translates to: LSGVSLLSPTPAPHLPQDANKTK*TFQVFP
Trigger: AGGAAACACCTGAAAGGTCAATTTGGTCTTATTGGC...GTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR CAA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATAAGGTTCAGCCCTGCTaGAAACTGGTTGCCACAGCA +
Preference number: 3 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYKVQPC*KLVATA
Trigger: TGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACCTT...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR CAA 90 bp TTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTCAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 3 (lower is better)
Translates to: FCSSSPTSGATTCRLPKPQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...AGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR CAA 90 bp CCACTTAGCACTGGTATCTGTAGCACTCTTCCGAGTCCCTTGAGAGAACTGCTGCAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 3 (lower is better)
Translates to: PLSTGICSTLPSPLRELLQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...CAGCAGTTCTCTCAAGGGACTCGGAAGAGTGCTACAGATACCAGTGCTAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp CTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACCTGGATCAAAATCACTaGGGCTCCATGTTAAAAATG +
Preference number: 3 (lower is better)
Translates to: LSGVSLLSPTPAPHLPQDLDQNH*GSMLKM
Trigger: CATTTTTAACATGGAGCCCAAGTGATTTTGATCCAG...GTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR CAA 90 bp GGTTCAGCCCTGCTTGAAACTGGTTGCCACAGCAGTGACTTTAGTATGAAGGCCAATGGATACTACCACTaGGTAGAAAGCCAAAAGGAA +
Preference number: 3 (lower is better)
Translates to: GSALLETGCHSSDFSMKANGYYH*VESQKE
Trigger: TTCCTTTTGGCTTTCTACCAAGTGGTAGTATCCATT...GGCCTTCATACTAAAGTCACTGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR CAA 90 bp CATCAACACCAACTCCACCACTGGCTGACTGGGGACAACACATACTTTGGTAGTCAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 3 (lower is better)
Translates to: HQHQLHHWLTGDNTYFGSQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...ACTACCAAAGTATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR CAA 90 bp GTACAGTGTGAGAGTCTCCACTTAGCACTGGTATCTGTAGCACTCTTCCGAGTCCAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 3 (lower is better)
Translates to: VQCESLHLALVSVALFRVQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...GACTCGGAAGAGTGCTACAGATACCAGTGCTAAGTGGAGACTCTCACACTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp AGAACTGCTGAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCAAGCGGAGCAACAACTaGCAGGCTCCCAAAACCTTC +
Preference number: 3 (lower is better)
Translates to: RTAEFPLKESTATFSVVSKRSNN*QAPKTF
Trigger: GAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTT...GGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTCAGCAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR CAA 90 bp TTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTGAGAAGAATACTTGGTaGTCTTTAGTCTGGATTGAG +
Preference number: 3 (lower is better)
Translates to: FCSSSPTSGATTCRLPKPEKNTW*SLVWIE
Trigger: CTCAATCCAGACTAAAGACAACCAAGTATTCTTCTC...AGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
3UTR TCA 72 bp GCGGACCTATGTATAATGGAGCCAATAAGACCAAATTaGCCTTTCAGGTGTTTCCTTGCTATCTCCCACCCC +
Preference number: 3 (lower is better)
Translates to: ADLCIMEPIRPN*PFRCFLAISHP
Trigger: GGGGTGGGAGATAGCAAGGAAACACCTGAAAGGTCAATTTGGTCTTATTGGCTCCATTATACATAGGTCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR CAA 90 bp CTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACGGTAAAGGATATTCATaGAACACAAGGACACTTAGA +
Preference number: 3 (lower is better)
Translates to: LSGVSLLSPTPAPHLPQDGKGYS*NTRTLR
Trigger: TCTAAGTGTCCTTGTGTTCAATGAATATCCTTTACC...GTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR CAA 90 bp CTATGCACAGTACAGTGTGAGAGTCTCCACTTAGCACTGGTATCTGTAGCACTCCAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 3 (lower is better)
Translates to: LCTVQCESLHLALVSVALQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...GAGTGCTACAGATACCAGTGCTAAGTGGAGACTCTCACACTGTACTGTGCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp GTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAAGAGAAGAATACTTGGTaGTCTTTAGTCTGGATTGAG +
Preference number: 3 (lower is better)
Translates to: VQQAEQQLAGSQNLHQHQEKNTW*SLVWIE
Trigger: CTCAATCCAGACTAAAGACAACCAAGTATTCTTCTC...TTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
3UTR TCA 72 bp GGCAGCCCAGTCCATGCTATATTGTCCTTAACTCACTaGACCACCCTGGTTTTTCCAATGAAAGATAAGCTC +
Preference number: 3 (lower is better)
Translates to: GSPVHAILSLTH*TTLVFPMKDKL
Trigger: GAGCTTATCTTTCATTGGAAAAACCAGGGTGGTTCAGTGAGTTAAGGACAATATAGCATGGACTGGGCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR TCA 72 bp GTTAGGGTAGAGATCAGTTCTATGCACAGTACAGTGTaGGAGTCTCCACTTAGCACTGGTATCTGTAGCACT +
Preference number: 3 (lower is better)
Translates to: VRVEISSMHSTV*ESPLSTGICST
Trigger: AGTGCTACAGATACCAGTGCTAAGTGGAGACTCTCACACTGTACTGTGCATAGAACTGATCTCTACCCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR GCA 72 bp ATTTGGAAACAAATGCTAGACTGGCAGCCCAGTCCATaGTATATTGTCCTTAACTCACTGAACCACCCTGGT +
Preference number: 3 (lower is better)
Translates to: IWKQMLDWQPSP*YIVLNSLNHPG
Trigger: ACCAGGGTGGTTCAGTGAGTTAAGGACAATATAGCATGGACTGGGCTGCCAGTCTAGCATTTGTTTCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR CAA 90 bp ATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTTTGTGTTTCAGCTGGTaGCAGAAAGCCCTCACATCA +
Preference number: 3 (lower is better)
Translates to: ISLKRVDCNFLCGFLCLRLCFSW*QKALTS
Trigger: TGATGTGAGGGCTTTCTGCAACCAGCTGAAACACAA...ACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp TGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGATCTTCTCTGTCTCAGAAAGCGGAGCAACAACTaGCAGGCTCCCAAAACCTTC +
Preference number: 3 (lower is better)
Translates to: CGFLCLRKNLFCDLLCLRKRSNN*QAPKTF
Trigger: GAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTT...TCTGAGACAGAGAAGATCACAGAATAAATTTTTACGGAGACAAAGGAAACCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
3UTR TCA 72 bp ATACAACTGCCATCTGGATTTCTTCAGAAAGTTGTGTaGAGGACTCAGCCTCTCGGAATCTTTGCACAAAAC +
Preference number: 3 (lower is better)
Translates to: IQLPSGFLQKVV*RTQPLGIFAQN
Trigger: GTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCTTCACACAACTTTCTGAAGAAATCCAGATGGCAGTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR CCA 72 bp AGGACTCAGCCTCTCGGAATCTTTGCACAAAACTTTTaGCATGAGGAGTTCCTATCACTTTCTGAGAAGAAT +
Preference number: 3 (lower is better)
Translates to: RTQPLGIFAQNF*HEEFLSLSEKN
Trigger: ATTCTTCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp GAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCCAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 3 (lower is better)
Translates to: EFPLKESTATFSVVSFVSQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...GGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp GTTTGTATGACAGGCATTGAAACTCCACTATTCAAGAGCTGCTTACTGTTAGGGGTCAAAAGAAAAGTTTaGCAGCAGCAGTCCAACAAG +
Preference number: 3 (lower is better)
Translates to: VCMTGIETPLFKSCLLLGVKRKV*QQQSNK
Trigger: CTTGTTGGACTGCTGCTGCAAAACTTTTCTTTTGAC...CCCTAACAGTAAGCAGCTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
3UTR-3UTR CAA 90 bp AGATCAGTTCTATGCACAGTACAGTGTGAGAGTCTCCACTTAGCACTGGTATCTTTTCTTCACTGGCTCTaGGTGACTGCTCATTTATTA +
Preference number: 3 (lower is better)
Translates to: RSVLCTVQCESLHLALVSFLHWL*VTAHLL
Trigger: TAATAAATGAGCAGTCACCAAGAGCCAGTGAAGAAA...AGATACCAGTGCTAAGTGGAGACTCTCACACTGTACTGTGCATAGAACTGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp TTGCTCCTGCACCATACAACTGCCATCTGGATTTCTTCAGAAAGTTGTGTGAAGGAGAAGAATACTTGGTaGTCTTTAGTCTGGATTGAG +
Preference number: 3 (lower is better)
Translates to: LLLHHTTAIWISSESCVKEKNTW*SLVWIE
Trigger: CTCAATCCAGACTAAAGACAACCAAGTATTCTTCTC...CTTCACACAACTTTCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGGAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp GAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAAGGGAGAAGAATACTTGGTaGTCTTTAGTCTGGATTGAG +
Preference number: 3 (lower is better)
Translates to: EVRHWLNPSDLLKQSKQREKNTW*SLVWIE
Trigger: CTCAATCCAGACTAAAGACAACCAAGTATTCTTCTC...CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp GTTTGTATGACAGGCATTGAAACTCCACTATTCAAGAGCTGCTTACTGTTAGGGTGGCAAACTAGTACCTaGAGCTTCCAGATGTTTAAG +
Preference number: 3 (lower is better)
Translates to: VCMTGIETPLFKSCLLLGWQTST*SFQMFK
Trigger: CTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCA...CCCTAACAGTAAGCAGCTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp AGAACTGCTGAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTGGCAAACTAGTACCTaGAGCTTCCAGATGTTTAAG +
Preference number: 3 (lower is better)
Translates to: RTAEFPLKESTATFSVVSWQTST*SFQMFK
Trigger: CTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCA...GGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTCAGCAGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp CTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGTGGCAAACTAGTACCTaGAGCTTCCAGATGTTTAAG +
Preference number: 3 (lower is better)
Translates to: LWQTSTLSFQMFKPVAFKWQTST*SFQMFK
Trigger: CTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCA...CTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp TTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTATGGCAAACTAGTACCTaGAGCTTCCAGATGTTTAAG +
Preference number: 3 (lower is better)
Translates to: FPLKESTATFSVVSFVSVWQTST*SFQMFK
Trigger: CTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCA...TACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp GAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCCCACGAAGAAGGTGGTaGCAAATAGACGTTTTTATG +
Preference number: 3 (lower is better)
Translates to: EFPLKESTATFSVVSFVSPRRRW*QIDVFM
Trigger: CATAAAAACGTCTATTTGCAACCACCTTCTTCGTGG...GGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp CTCTGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGATCTTCTCTGTCTCAATCCTAGCGACCTCTaGAAGCAATCCAAACAAAGG +
Preference number: 3 (lower is better)
Translates to: LCGFLCLRKNLFCDLLCLNPSDL*KQSKQR
Trigger: CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATT...GAGACAGAGAAGATCACAGAATAAATTTTTACGGAGACAAAGGAAACCACAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp AGAACTGCTGAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTCTTCACTGGCTCTaGGTGACTGCTCATTTATTA +
Preference number: 3 (lower is better)
Translates to: RTAEFPLKESTATFSVVSFLHWL*VTAHLL
Trigger: TAATAAATGAGCAGTCACCAAGAGCCAGTGAAGAAA...GGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTCAGCAGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp TTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAGAGAAGAATACTTGGTaGTCTTTAGTCTGGATTGAG +
Preference number: 3 (lower is better)
Translates to: FPLKESTATFSVVSFVSVEKNTW*SLVWIE
Trigger: CTCAATCCAGACTAAAGACAACCAAGTATTCTTCTC...TACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp TTAGTATTCAGAGGCGGACCTATGTATAATGGAGCCAATAAGACCAAATTGACCTGGCAAACTAGTACCTaGAGCTTCCAGATGTTTAAG +
Preference number: 3 (lower is better)
Translates to: LVFRGGPMYNGANKTKLTWQTST*SFQMFK
Trigger: CTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCA...GGTCAATTTGGTCTTATTGGCTCCATTATACATAGGTCCGCCTCTGAATACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469809.5
ENST00000472637.5
3UTR-3UTR CAA 90 bp GACTCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTACAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 3 (lower is better)
Translates to: DSSLKTLLFFTGCPRSTLQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...TAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp ATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAAGAATAATCCTAGCGACCTCTaGAAGCAATCCAAACAAAGG +
Preference number: 3 (lower is better)
Translates to: IFAQNFWHEEFLSLSEKNNPSDL*KQSKQR
Trigger: CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATT...ATTCTTCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp TGGTTGCAAATAGACGTTTTTATGCACTCTAGTTTCTTTGGCAAACTAGTACCTAATCCTAGCGACCTCTaGAAGCAATCCAAACAAAGG +
Preference number: 3 (lower is better)
Translates to: WLQIDVFMHSSFFGKLVPNPSDL*KQSKQR
Trigger: CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATT...AGGTACTAGTTTGCCAAAGAAACTAGAGTGCATAAAAACGTCTATTTGCAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp CTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGATCTTCAATCCTAGCGACCTCTaGAAGCAATCCAAACAAAGG +
Preference number: 3 (lower is better)
Translates to: LLFFTGCPRSTLFCTLIFNPSDL*KQSKQR
Trigger: CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATT...GAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000494164.5
ENST00000496206.5
3UTR-3UTR CAA 90 bp AAAATCTTTGAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCGAGAAGAATACTTGGTaGTCTTTAGTCTGGATTGAG +
Preference number: 3 (lower is better)
Translates to: KIFEVRHWLNPSDLLKQSEKNTW*SLVWIE
Trigger: CTCAATCCAGACTAAAGACAACCAAGTATTCTTCTC...GGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAAGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp GACTCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTACCACGAAGAAGGTGGTaGCAAATAGACGTTTTTATG +
Preference number: 3 (lower is better)
Translates to: DSSLKTLLFFTGCPRSTLPRRRW*QIDVFM
Trigger: CATAAAAACGTCTATTTGCAACCACCTTCTTCGTGG...TAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp CTATCACTTTCTGAGAAGAATACTTGGTTGTCTTTAGTCTGGATTGAGAACATTTTGTGTTTCAGCTGGTaGCAGAAAGCCCTCACATCA +
Preference number: 3 (lower is better)
Translates to: LSLSEKNTWLSLVWIENILCFSW*QKALTS
Trigger: TGATGTGAGGGCTTTCTGCAACCAGCTGAAACACAA...AATGTTCTCAATCCAGACTAAAGACAACCAAGTATTCTTCTCAGAAAGTGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
3UTR CCA 72 bp TGCTTTGAAGTTTTGATACCTGAGCCACGAAGAAGGTaGTTGCAAATAGACGTTTTTATGCACTCTAGTTTC +
Preference number: 3 (lower is better)
Translates to: CFEVLIPEPRRR*LQIDVFMHSSF
Trigger: GAAACTAGAGTGCATAAAAACGTCTATTTGCAACCACCTTCTTCGTGGCTCAGGTATCAAAACTTCAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp TATAACTTGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCTTTTTGGCCATTTCTAGACTaGTCTAGAATGAAATCTCCT +
Preference number: 3 (lower is better)
Translates to: YNLLKARIYSVCVCVCSFWPFLD*SRMKSP
Trigger: AGGAGATTTCATTCTAGACAAGTCTAGAAATGGCCA...AAAAGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR-3UTR CAA 90 bp TGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGATCTTCTCTGTCTCAGAGAGAAGAATACTTGGTaGTCTTTAGTCTGGATTGAG +
Preference number: 3 (lower is better)
Translates to: CGFLCLRKNLFCDLLCLREKNTW*SLVWIE
Trigger: CTCAATCCAGACTAAAGACAACCAAGTATTCTTCTC...TCTGAGACAGAGAAGATCACAGAATAAATTTTTACGGAGACAAAGGAAACCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR-3UTR CAA 90 bp TCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGAAACTGGTCTCTTACTaGGAAGAAAACAACTCAAAC +
Preference number: 3 (lower is better)
Translates to: STATFSVVSFVSVKIYSVKLVSY*EENNSN
Trigger: GTTTGAGTTGTTTTCTTCCAAGTAAGAGACCAGTTT...CACAGAATAAATTTTTACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469809.5
3UTR TCA 72 bp CGTAAAAATTTATTCTGTGATCTTCTCTGTCTCAGATaGTGCTTTGAAGTTTTGATACCTGAGCCACGAAGA +
Preference number: 3 (lower is better)
Translates to: RKNLFCDLLCLR*CFEVLIPEPRR
Trigger: TCTTCGTGGCTCAGGTATCAAAACTTCAAAGCATCATCTGAGACAGAGAAGATCACAGAATAAATTTTTACG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
3UTR CCA 72 bp TGGCCATTTCTAGACTTGTCTAGAATGAAATCTCCTTaGTATTGTCTGTATTTTAAGGCACTAAATGGATAC +
Preference number: 3 (lower is better)
Translates to: WPFLDLSRMKSP*YCLYFKALNGY
Trigger: GTATCCATTTAGTGCCTTAAAATACAGACAATACCAAGGAGATTTCATTCTAGACAAGTCTAGAAATGGCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp AGTTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACGCCGCGCCGGGGTTCTaGACTGTCACTGCGCTGCGG +
Preference number: 4 (lower is better)
Translates to: SFAAAVQQAEQQLAGSQNAAPGF*TVTALR
Trigger: CCGCAGCGCAGTGACAGTGCAGAACCCCGGCGCGGC...GTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR CCA 90 bp CAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCTCCAGCGACCGGAGGTaGGGCGATGGGACCCAGTCC +
Preference number: 4 (lower is better)
Translates to: QQQSNKRSNNLQAPKTFISSDRR*GDGTQS
Trigger: GGACTGGGTCCCATCGCCCCACCTCCGGTCGCTGGA...GATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460410.5
ENST00000473284.5
CDS-3UTR GCA 90 bp GTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAAGCCGCGCCGGGGTTCTaGACTGTCACTGCGCTGCGG +
Preference number: 4 (lower is better)
Translates to: VQQAEQQLAGSQNLHQHQAAPGF*TVTALR
Trigger: CCGCAGCGCAGTGACAGTGCAGAACCCCGGCGCGGC...TTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR GCA 90 bp TGGCCCCTGTTTATCAGTCTCTGGGAAAGGGCTAATCTGCATCTTTTAGCAACCGCCGCGCCGGGGTTCTaGACTGTCACTGCGCTGCGG +
Preference number: 4 (lower is better)
Translates to: WPLFISLWERANLHLLATAAPGF*TVTALR
Trigger: CCGCAGCGCAGTGACAGTGCAGAACCCCGGCGCGGC...GGTTGCTAAAAGATGCAGATTAGCCCTTTCCCAGAGACTGATAAACAGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp TGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTCCAGCGACCGGAGGTaGGGCGATGGGACCCAGTCC +
Preference number: 4 (lower is better)
Translates to: CFLAISHPRSSFTSRHNGSSDRR*GDGTQS
Trigger: GGACTGGGTCCCATCGCCCCACCTCCGGTCGCTGGA...ACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383675.6
CDS-3UTR CCA 90 bp AAGTTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAATCCAGCGACCGGAGGTaGGGCGATGGGACCCAGTCC +
Preference number: 4 (lower is better)
Translates to: KFCSSSPTSGATTCRLPKSSDRR*GDGTQS
Trigger: GGACTGGGTCCCATCGCCCCACCTCCGGTCGCTGGA...TTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460410.5
ENST00000473284.5
CDS-3UTR GCA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATGCCGCGCCGGGGTTCTaGACTGTCACTGCGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYAAPGF*TVTALR
Trigger: CCGCAGCGCAGTGACAGTGCAGAACCCCGGCGCGGC...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR GCA 90 bp TTGCTCCTGCACCATACAACTGCCATCTGGATTTCTTCAGAAAGTTGTGTGAAGGCCGCGCCGGGGTTCTaGACTGTCACTGCGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LLLHHTTAIWISSESCVKAAPGF*TVTALR
Trigger: CCGCAGCGCAGTGACAGTGCAGAACCCCGGCGCGGC...CTTCACACAACTTTCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp CCAAAACCTTCATCAACACCAACTCCACCACTGGCTGACTGGGGACAACACATAAGCCCGGCGGGAGGCTaGCTTCATCGAGTAAACGCG +
Preference number: 4 (lower is better)
Translates to: PKPSSTPTPPLADWGQHISPAGG*LHRVNA
Trigger: CGCGTTTACTCGATGAAGGCAGCCTCCCGCCGGGCT...TATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460410.5
ENST00000473284.5
CDS-3UTR GCA 90 bp AGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAAGCCCGGCGGGAGGCTaGCTTCATCGAGTAAACGCG +
Preference number: 4 (lower is better)
Translates to: SPTSGATTCRLPKPSSTPSPAGG*LHRVNA
Trigger: CGCGTTTACTCGATGAAGGCAGCCTCCCGCCGGGCT...TGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460410.5
ENST00000473284.5
CDS-3UTR CCA 90 bp TGTTTCAGCTGGTTGCAGAAAGCCCTCACATCAAATTCTGATGACTCTTCTTTGCCGGAGGTGGGGCGATaGGACCCAGTCCGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: CFSWLQKALTSNSDDSSLPEVGR*DPVRAG
Trigger: TCCGGCCCGGACTGGGTCCCATCGCCCCACCTCCGG...CAAAGAAGAGTCATCAGAATTTGATGTGAGGGCTTTCTGCAACCAGCTGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473284.5
CDS-3UTR GCA 90 bp GCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGCTGACTGGGGACAAACGCTTTAAACATTaGTCAACCAAGGGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: AGSQNLHQHQLHHWLTGDKRFKH*STKGRA
Trigger: GGCGCGGCCCTTGGTTGAGCAATGTTTAAAGCGTTT...GTCCCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CCA 90 bp AGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGCTGACTGGGGACAACACCAACTCCACCACTaGCTGACTGGGGACAACACA +
Preference number: 4 (lower is better)
Translates to: RLPKPSSTPTPPLADWGQHQLHH*LTGDNT
Trigger: TGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTG...TTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR CCA 90 bp GAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAAGGTCCAGCGACCGGAGGTaGGGCGATGGGACCCAGTCC +
Preference number: 4 (lower is better)
Translates to: EVRHWLNPSDLLKQSKQRSSDRR*GDGTQS
Trigger: GGACTGGGTCCCATCGCCCCACCTCCGGTCGCTGGA...CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460410.5
ENST00000473284.5
ENST00000494164.5
CDS-3UTR CCA 90 bp TTTGAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAACCGGAGGTGGGGCGATaGGACCCAGTCCGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: FEVRHWLNPSDLLKQSKQPEVGR*DPVRAG
Trigger: TCCGGCCCGGACTGGGTCCCATCGCCCCACCTCCGG...TTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460410.5
ENST00000473284.5
ENST00000494164.5
CDS-3UTR CCA 90 bp AAAATCTTTGAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCCCGGAGGTGGGGCGATaGGACCCAGTCCGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: KIFEVRHWLNPSDLLKQSPEVGR*DPVRAG
Trigger: TCCGGCCCGGACTGGGTCCCATCGCCCCACCTCCGG...GGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAAGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000460410.5
ENST00000473284.5
ENST00000494164.5
CDS-3UTR TCA 90 bp CTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACAGGTTCAGCCCTGCTTaGAACTGGTTGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: LSGVSLLSPTPAPHLPQDRFSPA*NWLPQQ
Trigger: CTGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACCT...GTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp GTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAAGGCTCAGCCCGGCGGGAGGCTaGCTTCATCGAGTAAACGCG +
Preference number: 4 (lower is better)
Translates to: VRHWLNPSDLLKQSKQRLSPAGG*LHRVNA
Trigger: CGCGTTTACTCGATGAAGGCAGCCTCCCGCCGGGCT...GAGCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460410.5
ENST00000473284.5
ENST00000494164.5
CDS-3UTR CCA 90 bp TTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTCACCAACTCCACCACTaGCTGACTGGGGACAACACA +
Preference number: 4 (lower is better)
Translates to: FCSSSPTSGATTCRLPKPHQLHH*LTGDNT
Trigger: TGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTG...AGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR CCA 90 bp TGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTCTTTGAGGAGGGGATaGGGTGGCCCCACACCTCTT +
Preference number: 4 (lower is better)
Translates to: CFLAISHPRSSFTSRHNGSLRRG*GGPTPL
Trigger: AAGAGGTGTGGGGCCACCCCATCCCCTCCTCAAAGA...ACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp CAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGCTGACTAACTCCACCACTGGCTaGCTGGGGACAACACATACT +
Preference number: 4 (lower is better)
Translates to: QLAGSQNLHQHQLHHWLTNSTTG*LGTTHT
Trigger: AGTATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTT...AGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR TCA 90 bp CGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTAACTCCACCACTGGCTaGCTGGGGACAACACATACT +
Preference number: 4 (lower is better)
Translates to: RSNNLQAPKTFINTNSTTNSTTG*LGTTHT
Trigger: AGTATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTT...AGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR TCA 90 bp GCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGCTGACTGGGGACTCAAAACTGGTCTCCTaGGTAGCTTTGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: AGSQNLHQHQLHHWLTGDSKLVS*VALCFS
Trigger: GCTGAAACACAAAGCTACTCAGGAGACCAGTTTTGA...GTCCCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp TGGCCCCTGTTTATCAGTCTCTGGGAAAGGGCTAATCTGCATCTTTTAGCAACCAGTTCCTGTAGCTGGTaGGAAGCCCAGGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: WPLFISLWERANLHLLATSSCSW*EAQGQE
Trigger: TTCCTGCCCCTGGGCTTCTCACCAGCTACAGGAACT...GGTTGCTAAAAGATGCAGATTAGCCCTTTCCCAGAGACTGATAAACAGGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp CAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAGCGGAGCAACAACTTaGAGGCTCCCAAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: QQQSNKRSNNLQAPKTFISGATT*RLPKPS
Trigger: TGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCT...GATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR GCA 90 bp TTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCAGCGGAGCAACAACTTaGAGGCTCCCAAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: LQQQSNKRSNNLQAPKTFSGATT*RLPKPS
Trigger: TGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCT...GAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR GCA 90 bp AGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCATTTCAGGTGTTTCCTTaGTATCTCCCACCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: SGATTCRLPKPSSTPTPPFQVFP*YLPPPL
Trigger: GAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAA...TGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472637.5
CDS-3UTR CCA 90 bp GGTTCAGCCCTGCTTGAAACTGGTTGCCACAGCAGTGACTTTAGTATGAAGGCCTGTTTGAGGGCCAAATaGGGTTTGTGGCGGCCCATT +
Preference number: 4 (lower is better)
Translates to: GSALLETGCHSSDFSMKACLRAK*GLWRPI
Trigger: AATGGGCCGCCACAAACCCCATTTGGCCCTCAAACA...GGCCTTCATACTAAAGTCACTGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp GGTTCAGCCCTGCTTGAAACTGGTTGCCACAGCAGTGACTTTAGTATGAAGGCCCCACCACTGGCTGACTaGGGACAACACATACTTTGG +
Preference number: 4 (lower is better)
Translates to: GSALLETGCHSSDFSMKAPPLAD*GQHILW
Trigger: CCAAAGTATGTGTTGTCCCCAGTCAGCCAGTGGTGG...GGCCTTCATACTAAAGTCACTGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314400.10
CDS-3UTR CCA 90 bp GGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGCCACCACTGGCTGACTaGGGACAACACATACTTTGG +
Preference number: 4 (lower is better)
Translates to: GATTCRLPKPSSTPTPPLPPLAD*GQHILW
Trigger: CCAAAGTATGTGTTGTCCCCAGTCAGCCAGTGGTGG...CAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR CCA 90 bp ACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACACCAACTCCACCACTaGCTGACTGGGGACAACACA +
Preference number: 4 (lower is better)
Translates to: TSGATTCRLPKPSSTPTPHQLHH*LTGDNT
Trigger: TGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTG...TGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR CCA 90 bp TGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTCACTGTGCTCCAGCCTaGGCAACAGCACAAGACTCT +
Preference number: 4 (lower is better)
Translates to: CFLAISHPRSSFTSRHNGHCAPA*ATAQDS
Trigger: AGAGTCTTGTGCTGTTGCCCAGGCTGGAGCACAGTG...ACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp CCAAAACCTTCATCAACACCAACTCCACCACTGGCTGACTGGGGACAACACATACATCGAGTAAACGCGTaGGACTGGGAAGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: PKPSSTPTPPLADWGQHIHRVNA*DWEGPS
Trigger: ACTGGGTCCTTCCCAGTCCCACGCGTTTACTCGATG...TATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460410.5
ENST00000473284.5
CDS-3UTR TCA 90 bp GCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGCTGACTGGGGACAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: AGSQNLHQHQLHHWLTGDNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...GTCCCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR TCA 90 bp AAGTTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAAAACTCCACCACTGGCTaGCTGGGGACAACACATACT +
Preference number: 4 (lower is better)
Translates to: KFCSSSPTSGATTCRLPKNSTTG*LGTTHT
Trigger: AGTATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTT...TTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAACTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR TCA 90 bp TTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTAGTGGGTGGATCCCTTaGGTCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: FPCYLPPPLLIYLKTQWFSGWIP*VQEFET
Trigger: GGTCTCAAACTCCTGGACTCAAGGGATCCACCCACT...AAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp TTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTAGGTTCAGCCCTGCTTaGAACTGGTTGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: FPCYLPPPLLIYLKTQWFRFSPA*NWLPQQ
Trigger: CTGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACCT...AAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATGCCTGTGAATTTCTTTaGGGAGGGGATGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYACEFL*GGDGVA
Trigger: GGCCACCCCATCCCCTCCTCAAAGAAATTCACAGGC...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp AAGTTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAATTCACTGGCTCTTGGTaGCATAACCTGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: KFCSSSPTSGATTCRLPKFTGSW*HNLLTS
Trigger: GCTGGTGAGCAGGTTATGTCACCAAGAGCCAGTGAA...TTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462295.5
CDS-3UTR GCA 90 bp GCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGCTAGCGGAGCAACAACTTaGAGGCTCCCAAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: ATTCRLPKPSSTPTPPLASGATT*RLPKPS
Trigger: TGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCT...AGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR GCA 90 bp GCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACAGCGGAGCAACAACTTaGAGGCTCCCAAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: AVQQAEQQLAGSQNLHQHSGATT*RLPKPS
Trigger: TGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCT...GTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR GCA 90 bp CAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGCTGAGCGGAGCAACAACTTaGAGGCTCCCAAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: QQLAGSQNLHQHQLHHWLSGATT*RLPKPS
Trigger: TGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCT...CAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR GCA 90 bp CAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACAGAGAACCCATAACCTaGTCACCAGCCCAACCATCA +
Preference number: 4 (lower is better)
Translates to: QAEQQLAGSQNLHQHQLHREPIT*SPAQPS
Trigger: TGATGGTTGGGCTGGTGAGCAGGTTATGGGTTCTCT...GTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR GCA 90 bp CTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACAGAGAACCCATAACCTaGTCACCAGCCCAACCATCA +
Preference number: 4 (lower is better)
Translates to: LSGVSLLSPTPAPHLPQDREPIT*SPAQPS
Trigger: TGATGGTTGGGCTGGTGAGCAGGTTATGGGTTCTCT...GTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000472637.5
CDS-3UTR GCA 90 bp CCTTCATCAACACCAACTCCACCACTGGCTGACTGGGGACAACACATACTTTGGAGAGAACCCATAACCTaGTCACCAGCCCAACCATCA +
Preference number: 4 (lower is better)
Translates to: PSSTPTPPLADWGQHILWREPIT*SPAQPS
Trigger: TGATGGTTGGGCTGGTGAGCAGGTTATGGGTTCTCT...CCAAAGTATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460410.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR GCA 90 bp GCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACACTCCTGTGCAATGCTaGACTAAAGCAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: AVQQAEQQLAGSQNLHQHTPVQC*TKAAPL
Trigger: CAGAGGAGCTGCTTTAGTGCAGCATTGCACAGGAGT...GTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR GCA 90 bp TGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTCAGGTGTTTCCTTaGTATCTCCCACCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: CFLAISHPRSSFTSRHNGFQVFP*YLPPPL
Trigger: GAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAA...ACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR GCA 90 bp TGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTCCAGGAGGTGGAGGGTaGAGTGAACTGAGATCATAC +
Preference number: 4 (lower is better)
Translates to: CFLAISHPRSSFTSRHNGPGGGG*SELRSY
Trigger: GTATGATCTCAGTTCACTGCACCCTCCACCTCCTGG...ACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp CAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCTGTTTGAGGGCCAAATaGGGTTTGTGGCGGCCCATT +
Preference number: 4 (lower is better)
Translates to: QQAEQQLAGSQNLHQHQLCLRAK*GLWRPI
Trigger: AATGGGCCGCCACAAACCCCATTTGGCCCTCAAACA...GAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496340.1
CDS-3UTR CCA 90 bp TCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACCCACCACTGGCTGACTaGGGACAACACATACTTTGG +
Preference number: 4 (lower is better)
Translates to: SNKRSNNLQAPKTFINTNPPLAD*GQHILW
Trigger: CCAAAGTATGTGTTGTCCCCAGTCAGCCAGTGGTGG...GTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR CCA 90 bp CATCAACACCAACTCCACCACTGGCTGACTGGGGACAACACATACTTTGGTAGTCCACCACTGGCTGACTaGGGACAACACATACTTTGG +
Preference number: 4 (lower is better)
Translates to: HQHQLHHWLTGDNTYFGSPPLAD*GQHILW
Trigger: CCAAAGTATGTGTTGTCCCCAGTCAGCCAGTGGTGG...ACTACCAAAGTATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR CCA 90 bp TGGCCCCTGTTTATCAGTCTCTGGGAAAGGGCTAATCTGCATCTTTTAGCAACCCACCAACTCCACCACTaGCTGACTGGGGACAACACA +
Preference number: 4 (lower is better)
Translates to: WPLFISLWERANLHLLATHQLHH*LTGDNT
Trigger: TGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTG...GGTTGCTAAAAGATGCAGATTAGCCCTTTCCCAGAGACTGATAAACAGGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314400.10
CDS-3UTR CCA 90 bp CTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACGATTTGGGGGCCACCTaGATCAAAATCACTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LSGVSLLSPTPAPHLPQDDLGAT*IKITWA
Trigger: AGCCCAAGTGATTTTGATCCAGGTGGCCCCCAAATC...GTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR CAA 72 bp GTTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTaGCAGGCTCCCAAAACCTTCATCAACACCAACTCC +
Preference number: 4 (lower is better)
Translates to: VLQQQSNKRSNN*QAPKTFINTNS
Trigger: GGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR TCA 90 bp CTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACATTGCTCAACCTGTTTaGGGGCCAAATGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: LSGVSLLSPTPAPHLPQDIAQPV*GPNGVC
Trigger: ACAAACCCCATTTGGCCCTCAAACAGGTTGAGCAAT...GTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp GCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGCTGACTGGGGACAAACAGGTCTTGAATTaGGCCCTCCAAATTCATGTT +
Preference number: 4 (lower is better)
Translates to: AGSQNLHQHQLHHWLTGDKQVLN*ALQIHV
Trigger: AACATGAATTTGGAGGGCTCAATTCAAGACCTGTTT...GTCCCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR TCA 90 bp CTATGCACAGTACAGTGTGAGAGTCTCCACTTAGCACTGGTATCTGTAGCACTCAACTCCACCACTGGCTaGCTGGGGACAACACATACT +
Preference number: 4 (lower is better)
Translates to: LCTVQCESLHLALVSVALNSTTG*LGTTHT
Trigger: AGTATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTT...GAGTGCTACAGATACCAGTGCTAAGTGGAGACTCTCACACTGTACTGTGCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp TTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCGGCAAACTAGTACCTTaGGCTTCCAGATGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: LQQQSNKRSNNLQAPKTFGKLVP*ASRCLS
Trigger: GCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCC...GAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp CCTGTGTGTCCTAATGCCATCAGAAGTGATAAAGTTGGTACTAGGATGTGGGTAGCCTGTGAATTTCTTTaGGGAGGGGATGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PVCPNAIRSDKVGTRMWVACEFL*GGDGVA
Trigger: GGCCACCCCATCCCCTCCTCAAAGAAATTCACAGGC...TACCCACATCCTAGTACCAACTTTATCACTTCTGATGGCATTAGGACACACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp GCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGCTGACTGGGGACCCATTCTGTTGTGATTaGTGTAAAGGACTGCACATA +
Preference number: 4 (lower is better)
Translates to: AGSQNLHQHQLHHWLTGDPFCCD*CKGLHI
Trigger: TATGTGCAGTCCTTTACAGCAATCACAACAGAATGG...GTCCCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496340.1
CDS-3UTR GCA 90 bp GTACAGTGTGAGAGTCTCCACTTAGCACTGGTATCTGTAGCACTCTTCCGAGTCACTCCTGTGCAATGCTaGACTAAAGCAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VQCESLHLALVSVALFRVTPVQC*TKAAPL
Trigger: CAGAGGAGCTGCTTTAGTGCAGCATTGCACAGGAGT...GACTCGGAAGAGTGCTACAGATACCAGTGCTAAGTGGAGACTCTCACACTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp TGGCCCCTGTTTATCAGTCTCTGGGAAAGGGCTAATCTGCATCTTTTAGCAACCCCAGGAGGTGGAGGGTaGAGTGAACTGAGATCATAC +
Preference number: 4 (lower is better)
Translates to: WPLFISLWERANLHLLATPGGGG*SELRSY
Trigger: GTATGATCTCAGTTCACTGCACCCTCCACCTCCTGG...GGTTGCTAAAAGATGCAGATTAGCCCTTTCCCAGAGACTGATAAACAGGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp CTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACGACCCAGGGCTTATATaGCATAGAGAAAAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: LSGVSLLSPTPAPHLPQDDPGLI*HREKGV
Trigger: TACCCCCTTTTCTCTATGGCATATAAGCCCTGGGTC...GTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp ACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCAAAACGCTTTAAACATTaGTCAACCAAGGGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: TSGATTCRLPKPSSTPTPKRFKH*STKGRA
Trigger: GGCGCGGCCCTTGGTTGAGCAATGTTTAAAGCGTTT...TGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
CDS-3UTR GCA 90 bp CAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCAAACGCTTTAAACATTaGTCAACCAAGGGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: QQAEQQLAGSQNLHQHQLKRFKH*STKGRA
Trigger: GGCGCGGCCCTTGGTTGAGCAATGTTTAAAGCGTTT...GAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CCA 90 bp CTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACGCTTTGTGTTTCAGCTaGTTGCAGAAAGCCCTCACA +
Preference number: 4 (lower is better)
Translates to: LSGVSLLSPTPAPHLPQDALCFS*LQKALT
Trigger: TGTGAGGGCTTTCTGCAACCAGCTGAAACACAAAGC...GTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000472637.5
CDS-3UTR CCA 90 bp CCACTTAGCACTGGTATCTGTAGCACTCTTCCGAGTCCCTTGAGAGAACTGCTGGCTTTGTGTTTCAGCTaGTTGCAGAAAGCCCTCACA +
Preference number: 4 (lower is better)
Translates to: PLSTGICSTLPSPLRELLALCFS*LQKALT
Trigger: TGTGAGGGCTTTCTGCAACCAGCTGAAACACAAAGC...CAGCAGTTCTCTCAAGGGACTCGGAAGAGTGCTACAGATACCAGTGCTAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp TTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTGCTTTGTGTTTCAGCTaGTTGCAGAAAGCCCTCACA +
Preference number: 4 (lower is better)
Translates to: FCSSSPTSGATTCRLPKPALCFS*LQKALT
Trigger: TGTGAGGGCTTTCTGCAACCAGCTGAAACACAAAGC...AGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp AACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCATTGCTCAACCTGTTTaGGGGCCAAATGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: NKRSNNLQAPKTFINTNSIAQPV*GPNGVC
Trigger: ACAAACCCCATTTGGCCCTCAAACAGGTTGAGCAAT...GGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496340.1
CDS-3UTR TCA 90 bp CTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGCTGACTGGGAAACAGGTCTTGAATTaGGCCCTCCAAATTCATGTT +
Preference number: 4 (lower is better)
Translates to: LAGSQNLHQHQLHHWLTGKQVLN*ALQIHV
Trigger: AACATGAATTTGGAGGGCTCAATTCAAGACCTGTTT...CCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR TCA 90 bp GCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: AEQQLAGSQNLHQHQLHHNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...GTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR TCA 90 bp AACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCATCCTAGCGACCTCTTaGAGCAATCCAAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: NKRSNNLQAPKTFINTNSILATS*SNPNKG
Trigger: GCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGAT...GGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp CAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACTCAAAACTGGTCTCCTaGGTAGCTTTGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: QAEQQLAGSQNLHQHQLHSKLVS*VALCFS
Trigger: GCTGAAACACAAAGCTACTCAGGAGACCAGTTTTGA...GTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp CTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACTTGTCCTTAACTCACTaGACCACCCTGGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LSGVSLLSPTPAPHLPQDLSLTH*TTLVFP
Trigger: TGGAAAAACCAGGGTGGTTCAGTGAGTTAAGGACAA...GTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATGAGGGTGCAGTGAACTaGGATCATACCACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYEGAVN*DHTTVL
Trigger: GAGCACAGTGGTATGATCTCAGTTCACTGCACCCTC...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATAGTGGGTGGATCCCTTaGGTCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYSGWIP*VQEFET
Trigger: GGTCTCAAACTCCTGGACTCAAGGGATCCACCCACT...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp CTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACGCAGTGACTTTAGTATaGAGGCCAAGAGGATTGGAA +
Preference number: 4 (lower is better)
Translates to: LSGVSLLSPTPAPHLPQDAVTLV*RPRGLE
Trigger: TTCCAATCCTCTTGGCCTTCATACTAAAGTCACTGC...GTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp TTAGTATTCAGAGGCGGACCTATGTATAATGGAGCCAATAAGACCAAATTGACCCCCAGGGGCAGGAAGTaGGACATCCCCAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: LVFRGGPMYNGANKTKLTPRGRK*DIPRAR
Trigger: TCTTGCTCTGGGGATGTCTCACTTCCTGCCCCTGGG...GGTCAATTTGGTCTTATTGGCTCCATTATACATAGGTCCGCCTCTGAATACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp TGGCCCCTGTTTATCAGTCTCTGGGAAAGGGCTAATCTGCATCTTTTAGCAACCGAACATGTGAGACACTaGAGTCACCTCCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: WPLFISLWERANLHLLATEHVRH*SHLLRE
Trigger: TTCCCTGAGGAGGTGACTTCAGTGTCTCACATGTTC...GGTTGCTAAAAGATGCAGATTAGCCCTTTCCCAGAGACTGATAAACAGGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp GGTTCAGCCCTGCTTGAAACTGGTTGCCACAGCAGTGACTTTAGTATGAAGGCCTGTGTTTCAGCTGGTTaGAGAAAGCCCTCACATCAA +
Preference number: 4 (lower is better)
Translates to: GSALLETGCHSSDFSMKACVSAG*RKPSHQ
Trigger: TTGATGTGAGGGCTTTCTGCAACCAGCTGAAACACA...GGCCTTCATACTAAAGTCACTGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp GCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAATGTGTTTCAGCTGGTTaGAGAAAGCCCTCACATCAA +
Preference number: 4 (lower is better)
Translates to: AAVQQAEQQLAGSQNLHQCVSAG*RKPSHQ
Trigger: TTGATGTGAGGGCTTTCTGCAACCAGCTGAAACACA...TTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR GCA 90 bp AAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCCCTGCACCATACAACTaGCATCTGGATTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: KRSNNLQAPKTFINTNSTPAPYN*HLDFFR
Trigger: TCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGG...GGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR GCA 90 bp ACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGCTGATTGGCCTGCACCATACAACTaGCATCTGGATTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: TCRLPKPSSTPTPPLADWPAPYN*HLDFFR
Trigger: TCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGG...CCAATCAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469169.5
CDS-3UTR GCA 90 bp CCACTTAGCACTGGTATCTGTAGCACTCTTCCGAGTCCCTTGAGAGAACTGCTGCCTGCACCATACAACTaGCATCTGGATTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: PLSTGICSTLPSPLRELLPAPYN*HLDFFR
Trigger: TCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGG...CAGCAGTTCTCTCAAGGGACTCGGAAGAGTGCTACAGATACCAGTGCTAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp CAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACCCTGCACCATACAACTaGCATCTGGATTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: QQSNKRSNNLQAPKTFINPAPYN*HLDFFR
Trigger: TCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGG...GTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR GCA 90 bp GAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGCCTGCACCATACAACTaGCATCTGGATTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: EQQLAGSQNLHQHQLHHWPAPYN*HLDFFR
Trigger: TCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGG...CCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR GCA 90 bp GCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAAAAACGCTTTAAACATTaGTCAACCAAGGGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: AISHPRSSFTSRHNGFCKKRFKH*STKGRA
Trigger: GGCGCGGCCCTTGGTTGAGCAATGTTTAAAGCGTTT...TTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000469809.5
ENST00000472637.5
CDS-3UTR CCA 90 bp GGTTCAGCCCTGCTTGAAACTGGTTGCCACAGCAGTGACTTTAGTATGAAGGCCTCTGCATCTAAGGTTTaGCTCTTCAGCGACAGTATG +
Preference number: 4 (lower is better)
Translates to: GSALLETGCHSSDFSMKASASKV*LFSDSM
Trigger: CATACTGTCGCTGAAGAGCCAAACCTTAGATGCAGA...GGCCTTCATACTAAAGTCACTGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp AGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCATCTGCATCTAAGGTTTaGCTCTTCAGCGACAGTATG +
Preference number: 4 (lower is better)
Translates to: SGATTCRLPKPSSTPTPPSASKV*LFSDSM
Trigger: CATACTGTCGCTGAAGAGCCAAACCTTAGATGCAGA...TGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496340.1
CDS-3UTR CCA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATTGTTTGAGGGCCAAATaGGGTTTGTGGCGGCCCATT +
Preference number: 4 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYCLRAK*GLWRPI
Trigger: AATGGGCCGCCACAAACCCCATTTGGCCCTCAAACA...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp GTTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTTGAAGTAAGGCATTaGTTGAATCCTAGCGACCTC +
Preference number: 4 (lower is better)
Translates to: VLQQQSNKRSNNLQAPKTFEVRH*LNPSDL
Trigger: GAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAA...GGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CCA 90 bp GTACAGTGTGAGAGTCTCCACTTAGCACTGGTATCTGTAGCACTCTTCCGAGTCGCTTTGTGTTTCAGCTaGTTGCAGAAAGCCCTCACA +
Preference number: 4 (lower is better)
Translates to: VQCESLHLALVSVALFRVALCFS*LQKALT
Trigger: TGTGAGGGCTTTCTGCAACCAGCTGAAACACAAAGC...GACTCGGAAGAGTGCTACAGATACCAGTGCTAAGTGGAGACTCTCACACTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp CAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCGAGCCACGAAGAAGGTaGTTGCAAATAGACGTTTTT +
Preference number: 4 (lower is better)
Translates to: QQQSNKRSNNLQAPKTFIEPRRR*LQIDVF
Trigger: AAAAACGTCTATTTGCAACCACCTTCTTCGTGGCTC...GATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CCA 90 bp GCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAAGATTTGGGGGCCACCTaGATCAAAATCACTTGGGCT +
Preference number: 4 (lower is better)
Translates to: AISHPRSSFTSRHNGFCKDLGAT*IKITWA
Trigger: AGCCCAAGTGATTTTGATCCAGGTGGCCCCCAAATC...TTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp GGTTCAGCCCTGCTTGAAACTGGTTGCCACAGCAGTGACTTTAGTATGAAGGCCAAACAAATGCTAGACTaGCAGCCCAGTCCATGCTAT +
Preference number: 4 (lower is better)
Translates to: GSALLETGCHSSDFSMKAKQMLD*QPSPCY
Trigger: ATAGCATGGACTGGGCTGCCAGTCTAGCATTTGTTT...GGCCTTCATACTAAAGTCACTGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp TTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTTGGGAGACCAAAGTaGGTGGATCCCTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: FPCYLPPPLLIYLKTQWFFGRPK*VDPLSP
Trigger: TGGACTCAAGGGATCCACCCACTTTGGTCTCCCAAA...AAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp TGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTGTTGGTACTAGGATGTaGGTAATCCCAGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: CFLAISHPRSSFTSRHNGVGTRM*VIPALW
Trigger: CCAAAGTGCTGGGATTACCCACATCCTAGTACCAAC...ACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp CTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACCACTGCTCTTATAAATaGCCTGTGTGTCCTAATGCC +
Preference number: 4 (lower is better)
Translates to: LSGVSLLSPTPAPHLPQDHCSYK*PVCPNA
Trigger: GGCATTAGGACACACAGGCCATTTATAAGAGCAGTG...GTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp GAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAAGGCATCGAGTAAACGCGTaGGACTGGGAAGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: EVRHWLNPSDLLKQSKQRHRVNA*DWEGPS
Trigger: ACTGGGTCCTTCCCAGTCCCACGCGTTTACTCGATG...CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460410.5
ENST00000473284.5
ENST00000494164.5
CDS-3UTR TCA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATAACTCCACCACTGGCTaGCTGGGGACAACACATACT +
Preference number: 4 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYNSTTG*LGTTHT
Trigger: AGTATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTT...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314400.10
CDS-3UTR TCA 90 bp GCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAAATCCTAGCGACCTCTTaGAGCAATCCAAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: AISHPRSSFTSRHNGFCKILATS*SNPNKG
Trigger: GCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGAT...TTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000472637.5
CDS-3UTR TCA 90 bp AAGTTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAATCAAAACTGGTCTCCTaGGTAGCTTTGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: KFCSSSPTSGATTCRLPKSKLVS*VALCFS
Trigger: GCTGAAACACAAAGCTACTCAGGAGACCAGTTTTGA...TTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp AACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCTCAAAACTGGTCTCCTaGGTAGCTTTGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: NKRSNNLQAPKTFINTNSSKLVS*VALCFS
Trigger: GCTGAAACACAAAGCTACTCAGGAGACCAGTTTTGA...GGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp TGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTGGCAAACTAGTACCTTaGGCTTCCAGATGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: CFLAISHPRSSFTSRHNGGKLVP*ASRCLS
Trigger: GCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCC...ACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR TCA 90 bp AACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCGGCAAACTAGTACCTTaGGCTTCCAGATGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: NKRSNNLQAPKTFINTNSGKLVP*ASRCLS
Trigger: GCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCC...GGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp TTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTATGCACAGTACAGTGTaGGAGTCTCCACTTAGCACT +
Preference number: 4 (lower is better)
Translates to: FPCYLPPPLLIYLKTQWFMHSTV*ESPLST
Trigger: AGTGCTAAGTGGAGACTCTCACACTGTACTGTGCAT...AAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR TCA 90 bp TTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTCAAGAGGATTGGAAGTaGCACACAGGAGGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: FPCYLPPPLLIYLKTQWFQEDWK*HTGGLK
Trigger: TTTGAGACCTCCTGTGTGTCACTTCCAATCCTCTTG...AAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp TCCCTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACCCCAGGGGCAGGAAGTaGGACATCCCCAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: SLVIQAVANLVDQFQHINPRGRK*DIPRAR
Trigger: TCTTGCTCTGGGGATGTCTCACTTCCTGCCCCTGGG...GTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp CAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCAACTCCACCACTGGCTaGTTGGAAGAAAACAACTCA +
Preference number: 4 (lower is better)
Translates to: QQAEQQLAGSQNLHQHQLNSTTG*LEENNS
Trigger: TGAGTTGTTTTCTTCCAATCAGCCAGTGGTGGAGTT...GAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469169.5
ENST00000470663.1
CDS-3UTR TCA 90 bp CTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGCTGACTGGGTTGGTAGTTAAGGGCTaGTTTTCATTACTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LAGSQNLHQHQLHHWLTGLVVKG*FSLLGR
Trigger: TCTTCCAAGTAATGAAAATCAGCCCTTAACTACCAA...CCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460410.5
ENST00000472637.5
ENST00000496340.1
CDS-3UTR GCA 90 bp GCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTTCTTTAATTACAGCTaGAATGCAAAGGTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: AEQQLAGSQNLHQHQLHHFFNYS*NAKVKG
Trigger: GCCCTTGACCTTTGCATTGCAGCTGTAATTAAAGAA...GTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496340.1
CDS-3UTR GCA 90 bp AGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCAAAACGCTTTAAACATTaGTCAACCTGTTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SGATTCRLPKPSSTPTPPKRFKH*STCLRA
Trigger: GGCCCTCAAACAGGTTGAGCAATGTTTAAAGCGTTT...TGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496340.1
CDS-3UTR GCA 90 bp GTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAAGGCTCAGCGGAGCAACAACTTaGAGGCTCCCAAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: VRHWLNPSDLLKQSKQRLSGATT*RLPKPS
Trigger: TGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCT...GAGCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR GCA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATAGAGAACCCATAACCTaGTCACCAGCCCAACCATCA +
Preference number: 4 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYREPIT*SPAQPS
Trigger: TGATGGTTGGGCTGGTGAGCAGGTTATGGGTTCTCT...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000472637.5
CDS-3UTR GCA 90 bp TGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTCCTGCACCATACAACTaGCATCTGGATTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: CFLAISHPRSSFTSRHNGPAPYN*HLDFFR
Trigger: TCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGG...ACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR GCA 90 bp CCACTTAGCACTGGTATCTGTAGCACTCTTCCGAGTCCCTTGAGAGAACTGCTGTCAAGGAATTACATCTaGTTCTCAAGGGTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PLSTGICSTLPSPLRELLSRNYI*FSRVGC
Trigger: ACAGCCTACCCTTGAGAAGCAGATGTAATTCCTTGA...CAGCAGTTCTCTCAAGGGACTCGGAAGAGTGCTACAGATACCAGTGCTAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
CDS-3UTR CCA 90 bp TTGCTCCTGCACCATACAACTGCCATCTGGATTTCTTCAGAAAGTTGTGTGAAGTGTTTGAGGGCCAAATaGGGTTTGTGGCGGCCCATT +
Preference number: 4 (lower is better)
Translates to: LLLHHTTAIWISSESCVKCLRAK*GLWRPI
Trigger: AATGGGCCGCCACAAACCCCATTTGGCCCTCAAACA...CTTCACACAACTTTCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461381.5
CDS-3UTR CCA 90 bp CATAACCTGCTCACCAGCCCAACCATCACAAGGTTTAAAATAATGAACTCTTGCCACCAACTCCACCACTaGCTGACTGGGGACAACACA +
Preference number: 4 (lower is better)
Translates to: HNLLTSPTITRFKIMNSCHQLHH*LTGDNT
Trigger: TGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTG...GCAAGAGTTCATTATTTTAAACCTTGTGATGGTTGGGCTGGTGAGCAGGTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CCA 90 bp CTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGCTGACTGGGTCTCTTATTCTTTACTaGCTGTCCAAGATCCACATT +
Preference number: 4 (lower is better)
Translates to: LAGSQNLHQHQLHHWLTGSLILY*LSKIHI
Trigger: AATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGA...CCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CCA 90 bp AGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCAGAGCCACGAAGAAGGTaGTTGCAAATAGACGTTTTT +
Preference number: 4 (lower is better)
Translates to: SGATTCRLPKPSSTPTPPEPRRR*LQIDVF
Trigger: AAAAACGTCTATTTGCAACCACCTTCTTCGTGGCTC...TGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CCA 90 bp AGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACCACCACTGGCTGATTaGAAGAAAACAACTCAAACA +
Preference number: 4 (lower is better)
Translates to: SGATTCRLPKPSSTPTPPPPLAD*KKTTQT
Trigger: TGTTTGAGTTGTTTTCTTCCAATCAGCCAGTGGTGG...TGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469169.5
ENST00000470663.1
CDS-3UTR CCA 90 bp AAGTTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACACCAACTCCACCACTaGCTGATTGGAAGAAAACAA +
Preference number: 4 (lower is better)
Translates to: KFCSSSPTSGATTCRLPKHQLHH*LIGRKQ
Trigger: TTGTTTTCTTCCAATCAGCCAGTGGTGGAGTTGGTG...TTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000469169.5
ENST00000470663.1
CDS-3UTR TCA 90 bp GTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAAAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: VQQAEQQLAGSQNLHQHQNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...TTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR TCA 90 bp AGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACAAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: SSPTSGATTCRLPKPSSTNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...TGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR TCA 90 bp TGGCCCCTGTTTATCAGTCTCTGGGAAAGGGCTAATCTGCATCTTTTAGCAACCTCAAAACTGGTCTCCTaGGTAGCTTTGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: WPLFISLWERANLHLLATSKLVS*VALCFS
Trigger: GCTGAAACACAAAGCTACTCAGGAGACCAGTTTTGA...GGTTGCTAAAAGATGCAGATTAGCCCTTTCCCAGAGACTGATAAACAGGGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp GAAAAGTTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAGTTCCTATCACTTTCTaGGAAGAATACTTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: EKFCSSSPTSGATTCRLPVPITF*EEYLVV
Trigger: GACAACCAAGTATTCTTCTCAGAAAGTGATAGGAAC...TGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAACTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp GCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGCTGTTCCTATCACTTTCTaGGAAGAATACTTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: ATTCRLPKPSSTPTPPLAVPITF*EEYLVV
Trigger: GACAACCAAGTATTCTTCTCAGAAAGTGATAGGAAC...AGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp CCTTCATCAACACCAACTCCACCACTGGCTGACTGGGGACAACACATACTTTGGACAAAACTTTTGGCATaGGGAGTTCCTATCACTTTC +
Preference number: 4 (lower is better)
Translates to: PSSTPTPPLADWGQHILWTKLLA*GVPITF
Trigger: GAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGT...CCAAAGTATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp CCACTTAGCACTGGTATCTGTAGCACTCTTCCGAGTCCCTTGAGAGAACTGCTGACAAAACTTTTGGCATaGGGAGTTCCTATCACTTTC +
Preference number: 4 (lower is better)
Translates to: PLSTGICSTLPSPLRELLTKLLA*GVPITF
Trigger: GAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGT...CAGCAGTTCTCTCAAGGGACTCGGAAGAGTGCTACAGATACCAGTGCTAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTGATGCTTTGAAGTTTTaGTACCTGAGCCACGAAGAA +
Preference number: 4 (lower is better)
Translates to: CFLAISHPRSSFTSRHNGDALKF*YLSHEE
Trigger: TTCTTCGTGGCTCAGGTATCAAAACTTCAAAGCATC...ACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR TCA 90 bp ACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCAGATGCTTTGAAGTTTTaGTACCTGAGCCACGAAGAA +
Preference number: 4 (lower is better)
Translates to: TSGATTCRLPKPSSTPTPDALKF*YLSHEE
Trigger: TTCTTCGTGGCTCAGGTATCAAAACTTCAAAGCATC...TGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp TCCGAGTCCCTTGAGAGAACTGCTGAATTTCCCTTAAAAGAGTCGACTGCAACTATGCACAGTACAGTGTaGGAGTCTCCACTTAGCACT +
Preference number: 4 (lower is better)
Translates to: SESLERTAEFPLKESTATMHSTV*ESPLST
Trigger: AGTGCTAAGTGGAGACTCTCACACTGTACTGTGCAT...AGTTGCAGTCGACTCTTTTAAGGGAAATTCAGCAGTTCTCTCAAGGGACTCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp CAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAAATGTAGACTGAACTaGAATGAACTCCTGTGCAAT +
Preference number: 4 (lower is better)
Translates to: QQQSNKRSNNLQAPKTFIKCRLN*NELLCN
Trigger: ATTGCACAGGAGTTCATTTCAGTTCAGTCTACATTT...GATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp TGGCCCCTGTTTATCAGTCTCTGGGAAAGGGCTAATCTGCATCTTTTAGCAACCTTGTCCTTAACTCACTaGACCACCCTGGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: WPLFISLWERANLHLLATLSLTH*TTLVFP
Trigger: TGGAAAAACCAGGGTGGTTCAGTGAGTTAAGGACAA...GGTTGCTAAAAGATGCAGATTAGCCCTTTCCCAGAGACTGATAAACAGGGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp TCCCTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACAGTTCCTGTAGCTGGTaGGAAGCCCAGGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SLVIQAVANLVDQFQHINSSCSW*EAQGQE
Trigger: TTCCTGCCCCTGGGCTTCTCACCAGCTACAGGAACT...GTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp CTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACTTCTTTAATTACAGCTaGAATGCAAAGGTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: LSGVSLLSPTPAPHLPQDFFNYS*NAKVKG
Trigger: GCCCTTGACCTTTGCATTGCAGCTGTAATTAAAGAA...GTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATAGCGGAGCAACAACTTaGAGGCTCCCAAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYSGATT*RLPKPS
Trigger: TGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCT...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314400.10
CDS-3UTR GCA 90 bp GCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACCTGCACCATACAACTaGCATCTGGATTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: AISHPRSSFTSRHNGFCKPAPYN*HLDFFR
Trigger: TCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGG...TTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR GCA 90 bp CTTAGCACTGGTATCTGTAGCACTCTTCCGAGTCCCTTGAGAGAACTGCTGAATCCTGCACCATACAACTaGCATCTGGATTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LSTGICSTLPSPLRELLNPAPYN*HLDFFR
Trigger: TCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGG...ATTCAGCAGTTCTCTCAAGGGACTCGGAAGAGTGCTACAGATACCAGTGCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp GCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAATGGCAGCCCAGTCCATaGTATATTGTCCTTAACTCA +
Preference number: 4 (lower is better)
Translates to: AISHPRSSFTSRHNGFCKWQPSP*YIVLNS
Trigger: TGAGTTAAGGACAATATAGCATGGACTGGGCTGCCA...TTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp GGTTCAGCCCTGCTTGAAACTGGTTGCCACAGCAGTGACTTTAGTATGAAGGCCAGGGAAAGGCAAGAATaGTGTTTACAACTTAGCCTA +
Preference number: 4 (lower is better)
Translates to: GSALLETGCHSSDFSMKARERQE*CLQLSL
Trigger: TAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCT...GGCCTTCATACTAAAGTCACTGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp CATAACCTGCTCACCAGCCCAACCATCACAAGGTTTAAAATAATGAACTCTTGCCCACCACTGGCTGACTaGGGACAACACATACTTTGG +
Preference number: 4 (lower is better)
Translates to: HNLLTSPTITRFKIMNSCPPLAD*GQHILW
Trigger: CCAAAGTATGTGTTGTCCCCAGTCAGCCAGTGGTGG...GCAAGAGTTCATTATTTTAAACCTTGTGATGGTTGGGCTGGTGAGCAGGTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CCA 90 bp ACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCATTTGAAGTAAGGCATTaGTTGAATCCTAGCGACCTC +
Preference number: 4 (lower is better)
Translates to: TSGATTCRLPKPSSTPTPFEVRH*LNPSDL
Trigger: GAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAA...TGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CCA 90 bp TTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCTCTCTTATTCTTTACTaGCTGTCCAAGATCCACATT +
Preference number: 4 (lower is better)
Translates to: LQQQSNKRSNNLQAPKTFSLILY*LSKIHI
Trigger: AATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGA...GAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CCA 90 bp GGTTCAGCCCTGCTTGAAACTGGTTGCCACAGCAGTGACTTTAGTATGAAGGCCCTCAAGGGTAGGCTGTaGCAGATTTTTCATATTAAC +
Preference number: 4 (lower is better)
Translates to: GSALLETGCHSSDFSMKALKGRL*QIFHIN
Trigger: GTTAATATGAAAAATCTGCCACAGCCTACCCTTGAG...GGCCTTCATACTAAAGTCACTGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATTTTGGGAGACCAAAGTaGGTGGATCCCTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYFGRPK*VDPLSP
Trigger: TGGACTCAAGGGATCCACCCACTTTGGTCTCCCAAA...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATGTTGGTACTAGGATGTaGGTAATCCCAGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYVGTRM*VIPALW
Trigger: CCAAAGTGCTGGGATTACCCACATCCTAGTACCAAC...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp TGGCCCCTGTTTATCAGTCTCTGGGAAAGGGCTAATCTGCATCTTTTAGCAACCGGGCATTCCAGGAACTaGTTATCAGAAGTCAACATG +
Preference number: 4 (lower is better)
Translates to: WPLFISLWERANLHLLATGHSRN*LSEVNM
Trigger: CATGTTGACTTCTGATAACCAGTTCCTGGAATGCCC...GGTTGCTAAAAGATGCAGATTAGCCCTTTCCCAGAGACTGATAAACAGGGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp TTCAGAAAGTTGTGTGAAGGACTCAGCCTCTCGGAATCTTTGCACAAAACTTTTCATCGAGTAAACGCGTaGGACTGGGAAGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: FRKLCEGLSLSESLHKTFHRVNA*DWEGPS
Trigger: ACTGGGTCCTTCCCAGTCCCACGCGTTTACTCGATG...AAAAGTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCTTCACACAACTTTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473284.5
CDS-3UTR TCA 90 bp TCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACAAACAGGTCTTGAATTaGGCCCTCCAAATTCATGTT +
Preference number: 4 (lower is better)
Translates to: SNKRSNNLQAPKTFINTNKQVLN*ALQIHV
Trigger: AACATGAATTTGGAGGGCTCAATTCAAGACCTGTTT...GTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR TCA 90 bp GTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAAAAACAGGTCTTGAATTaGGCCCTCCAAATTCATGTT +
Preference number: 4 (lower is better)
Translates to: VQQAEQQLAGSQNLHQHQKQVLN*ALQIHV
Trigger: AACATGAATTTGGAGGGCTCAATTCAAGACCTGTTT...TTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR TCA 90 bp TTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: FPCYLPPPLLIYLKTQWFNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...AAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR TCA 90 bp CCACTTAGCACTGGTATCTGTAGCACTCTTCCGAGTCCCTTGAGAGAACTGCTGTTGGTAGTTAAGGGCTaGTTTTCATTGGAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: PLSTGICSTLPSPLRELLLVVKG*FSLEEN
Trigger: GTTTTCTTCCAATGAAAATCAGCCCTTAACTACCAA...CAGCAGTTCTCTCAAGGGACTCGGAAGAGTGCTACAGATACCAGTGCTAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462295.5
ENST00000473284.5
CDS-3UTR TCA 90 bp CCTTCATCAACACCAACTCCACCACTGGCTGACTGGGGACAACACATACTTTGGTTGGTAGTTAAGGGCTaGTTTTCATTGGAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: PSSTPTPPLADWGQHILWLVVKG*FSLEEN
Trigger: GTTTTCTTCCAATGAAAATCAGCCCTTAACTACCAA...CCAAAGTATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000462295.5
ENST00000473284.5
CDS-3UTR TCA 90 bp ATCTTTGAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAAAACTCCACCACTGGCTaGCTGGGGACAACACATACT +
Preference number: 4 (lower is better)
Translates to: IFEVRHWLNPSDLLKQSKNSTTG*LGTTHT
Trigger: AGTATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTT...TTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000460410.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATATCCTAGCGACCTCTTaGAGCAATCCAAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYILATS*SNPNKG
Trigger: GCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGAT...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp GAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAAGGATCCTAGCGACCTCTTaGAGCAATCCAAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: EVRHWLNPSDLLKQSKQRILATS*SNPNKG
Trigger: GCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGAT...CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
ENST00000496206.5
CDS-3UTR TCA 90 bp TGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTGTTCCTATCACTTTCTaGGAAGAATACTTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: CFLAISHPRSSFTSRHNGVPITF*EEYLVV
Trigger: GACAACCAAGTATTCTTCTCAGAAAGTGATAGGAAC...ACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR TCA 90 bp CATCAACACCAACTCCACCACTGGCTGACTGGGGACAACACATACTTTGGTAGTGTTCCTATCACTTTCTaGGAAGAATACTTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: HQHQLHHWLTGDNTYFGSVPITF*EEYLVV
Trigger: GACAACCAAGTATTCTTCTCAGAAAGTGATAGGAAC...ACTACCAAAGTATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp ACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCAACAAAACTTTTGGCATaGGGAGTTCCTATCACTTTC +
Preference number: 4 (lower is better)
Translates to: TSGATTCRLPKPSSTPTPTKLLA*GVPITF
Trigger: GAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGT...TGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp CAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACTTCTACTTAGAACACTaGACTAGCCTTGTTAATCAC +
Preference number: 4 (lower is better)
Translates to: QAEQQLAGSQNLHQHQLHFYLEH*TSLVNH
Trigger: GTGATTAACAAGGCTAGTTCAGTGTTCTAAGTAGAA...GTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp GCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACAAATGTAGACTGAACTaGAATGAACTCCTGTGCAAT +
Preference number: 4 (lower is better)
Translates to: AVQQAEQQLAGSQNLHQHKCRLN*NELLCN
Trigger: ATTGCACAGGAGTTCATTTCAGTTCAGTCTACATTT...GTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp GCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAAAAATGTAGACTGAACTaGAATGAACTCCTGTGCAAT +
Preference number: 4 (lower is better)
Translates to: AAVQQAEQQLAGSQNLHQKCRLN*NELLCN
Trigger: ATTGCACAGGAGTTCATTTCAGTTCAGTCTACATTT...TTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp CCAAAACCTTCATCAACACCAACTCCACCACTGGCTGACTGGGGACAACACATACCAATAAGACCAAATTaGCCTTTCAGGTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: PKPSSTPTPPLADWGQHIPIRPN*PFRCFL
Trigger: AAGGAAACACCTGAAAGGTCAATTTGGTCTTATTGG...TATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472637.5
CDS-3UTR TCA 90 bp GGTTCAGCCCTGCTTGAAACTGGTTGCCACAGCAGTGACTTTAGTATGAAGGCCGAAAATGAGAGGAGATaGAGATACTCCAAAAGAACA +
Preference number: 4 (lower is better)
Translates to: GSALLETGCHSSDFSMKAENERR*RYSKRT
Trigger: TGTTCTTTTGGAGTATCTTCATCTCCTCTCATTTTC...GGCCTTCATACTAAAGTCACTGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATCTCATACTGTGCCTGTaGATTTCTTTGAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYLILCL*ISLRRG
Trigger: TCCCCTCCTCAAAGAAATTCACAGGCACAGTATGAG...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp CAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACATAAGAAACCTAGGCTaGAAGGAGATGAGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: QAEQQLAGSQNLHQHQLHIRNLG*KEMRKK
Trigger: TTTCTTTCTCATCTCCTTTCAGCCTAGGTTTCTTAT...GTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470663.1
CDS-3UTR GCA 90 bp CTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGACTCCTGTGCAATGCTaGACTAAAGCAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LWQTSTLSFQMFKPVAFKTPVQC*TKAAPL
Trigger: CAGAGGAGCTGCTTTAGTGCAGCATTGCACAGGAGT...CTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp CTATGCACAGTACAGTGTGAGAGTCTCCACTTAGCACTGGTATCTGTAGCACTCTCAAGGAATTACATCTaGTTCTCAAGGGTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LCTVQCESLHLALVSVALSRNYI*FSRVGC
Trigger: ACAGCCTACCCTTGAGAAGCAGATGTAATTCCTTGA...GAGTGCTACAGATACCAGTGCTAAGTGGAGACTCTCACACTGTACTGTGCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
CDS-3UTR GCA 90 bp TTTCTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTTTTCAGGTGTTTCCTTaGTATCTCCCACCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: FLWQTSTLSFQMFKPVAFFQVFP*YLPPPL
Trigger: GAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAA...AAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAGAAA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000469809.5
ENST00000472637.5
CDS-3UTR GCA 90 bp CCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAAAAAAACGCTTTAAACATTaGTCAACCAAGGGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: PLKESTATFSVVSFVSVKKRFKH*STKGRA
Trigger: GGCGCGGCCCTTGGTTGAGCAATGTTTAAAGCGTTT...TTTTACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp GCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAATTTGAAGTAAGGCATTaGTTGAATCCTAGCGACCTC +
Preference number: 4 (lower is better)
Translates to: AISHPRSSFTSRHNGFCKFEVRH*LNPSDL
Trigger: GAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAA...TTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000472637.5
CDS-3UTR CCA 90 bp TTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTTGAAGTAAGGCATTaGTTGAATCCTAGCGACCTC +
Preference number: 4 (lower is better)
Translates to: FPCYLPPPLLIYLKTQWFFEVRH*LNPSDL
Trigger: GAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAA...AAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000472637.5
CDS-3UTR CCA 90 bp CAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACTTTGCACAAAACTTTTaGCATGAGGAGTTCCTATCA +
Preference number: 4 (lower is better)
Translates to: QQSNKRSNNLQAPKTFINFAQNF*HEEFLS
Trigger: TGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAA...GTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CCA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATGGCTACTTAGGGGACTaGGTGCATGAATATAGACAA +
Preference number: 4 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYGYLGD*VHEYRQ
Trigger: TTGTCTATATTCATGCACCCAGTCCCCTAAGTAGCC...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp TTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTAAACAGGTCTTGAATTaGGCCCTCCAAATTCATGTT +
Preference number: 4 (lower is better)
Translates to: FPCYLPPPLLIYLKTQWFKQVLN*ALQIHV
Trigger: AACATGAATTTGGAGGGCTCAATTCAAGACCTGTTT...AAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR TCA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR TCA 90 bp AGAACTGCTGAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCATCCTAGCGACCTCTTaGAGCAATCCAAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: RTAEFPLKESTATFSVVSILATS*SNPNKG
Trigger: GCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGAT...GGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTCAGCAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp GAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCATCCTAGCGACCTCTTaGAGCAATCCAAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: EFPLKESTATFSVVSFVSILATS*SNPNKG
Trigger: GCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGAT...GGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TCCGAGTCCCTTGAGAGAACTGCTGAATTTCCCTTAAAAGAGTCGACTGCAACTGATGCTTTGAAGTTTTaGTACCTGAGCCACGAAGAA +
Preference number: 4 (lower is better)
Translates to: SESLERTAEFPLKESTATDALKF*YLSHEE
Trigger: TTCTTCGTGGCTCAGGTATCAAAACTTCAAAGCATC...AGTTGCAGTCGACTCTTTTAAGGGAAATTCAGCAGTTCTCTCAAGGGACTCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTCTTCTCTGTCTCAGATaGTGCTTTGAAGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: CFLAISHPRSSFTSRHNGLLCLR*CFEVLI
Trigger: TATCAAAACTTCAAAGCATCATCTGAGACAGAGAAG...ACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR TCA 90 bp GTTTGTATGACAGGCATTGAAACTCCACTATTCAAGAGCTGCTTACTGTTAGGGATGCACAGTACAGTGTaGGAGTCTCCACTTAGCACT +
Preference number: 4 (lower is better)
Translates to: VCMTGIETPLFKSCLLLGMHSTV*ESPLST
Trigger: AGTGCTAAGTGGAGACTCTCACACTGTACTGTGCAT...CCCTAACAGTAAGCAGCTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp CATCAACACCAACTCCACCACTGGCTGACTGGGGACAACACATACTTTGGTAGTTTCTACTTAGAACACTaGACTAGCCTTGTTAATCAC +
Preference number: 4 (lower is better)
Translates to: HQHQLHHWLTGDNTYFGSFYLEH*TSLVNH
Trigger: GTGATTAACAAGGCTAGTTCAGTGTTCTAAGTAGAA...ACTACCAAAGTATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp TGGCCCCTGTTTATCAGTCTCTGGGAAAGGGCTAATCTGCATCTTTTAGCAACCCCCTGGTTTTTCCAATaGAAGATAAGCTCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: WPLFISLWERANLHLLATPWFFQ*KISSKV
Trigger: AACTTTGGAGCTTATCTTTCATTGGAAAAACCAGGG...GGTTGCTAAAAGATGCAGATTAGCCCTTTCCCAGAGACTGATAAACAGGGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp TATAACTTGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCTTTTGAGGGTGCAGTGAACTaGGATCATACCACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: YNLLKARIYSVCVCVCSFEGAVN*DHTTVL
Trigger: GAGCACAGTGGTATGATCTCAGTTCACTGCACCCTC...AAAAGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp GGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGCTGTTTTTATTTATTTaGATCACCGTCCACGAATCA +
Preference number: 4 (lower is better)
Translates to: GATTCRLPKPSSTPTPPLLFLFI*ITVHES
Trigger: TGATTCGTGGACGGTGATGCAAATAAATAAAAACAG...CAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR GCA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATTGGCAGCCCAGTCCATaGTATATTGTCCTTAACTCA +
Preference number: 4 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYWQPSP*YIVLNS
Trigger: TGAGTTAAGGACAATATAGCATGGACTGGGCTGCCA...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp CCTGTGTGTCCTAATGCCATCAGAAGTGATAAAGTTGGTACTAGGATGTGGGTAGGAGGTCTCAAACACTaGTCTTATAAATGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PVCPNAIRSDKVGTRMWVGGLKH*SYKWPV
Trigger: CACAGGCCATTTATAAGAGCAGTGTTTGAGACCTCC...TACCCACATCCTAGTACCAACTTTATCACTTCTGATGGCATTAGGACACACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp ATCTTTGAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAAAAACGCTTTAAACATTaGTCAACCAAGGGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: IFEVRHWLNPSDLLKQSKKRFKH*STKGRA
Trigger: GGCGCGGCCCTTGGTTGAGCAATGTTTAAAGCGTTT...TTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAAGAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
CDS-3UTR CCA 90 bp AACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCGACAGTATGACGAGATaGCATTCTTTAATTACAGCT +
Preference number: 4 (lower is better)
Translates to: NKRSNNLQAPKTFINTNSDSMTR*HSLITA
Trigger: AGCTGTAATTAAAGAATGCCATCTCGTCATACTGTC...GGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496340.1
CDS-3UTR CCA 90 bp GTTTGTATGACAGGCATTGAAACTCCACTATTCAAGAGCTGCTTACTGTTAGGGGCTTTGTGTTTCAGCTaGTTGCAGAAAGCCCTCACA +
Preference number: 4 (lower is better)
Translates to: VCMTGIETPLFKSCLLLGALCFS*LQKALT
Trigger: TGTGAGGGCTTTCTGCAACCAGCTGAAACACAAAGC...CCCTAACAGTAAGCAGCTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp ATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTGCTTTGTGTTTCAGCTaGTTGCAGAAAGCCCTCACA +
Preference number: 4 (lower is better)
Translates to: ISLKRVDCNFLCGFLCLRALCFS*LQKALT
Trigger: TGTGAGGGCTTTCTGCAACCAGCTGAAACACAAAGC...ACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp CAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACTCTGAGAAGAATACTTaGTTGTCTTTAGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: QQSNKRSNNLQAPKTFINSEKNT*LSLVWI
Trigger: AATCCAGACTAAAGACAACCAAGTATTCTTCTCAGA...GTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CCA 90 bp CAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGCTGACTTCTGAGAAGAATACTTaGTTGTCTTTAGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: QLAGSQNLHQHQLHHWLTSEKNT*LSLVWI
Trigger: AATCCAGACTAAAGACAACCAAGTATTCTTCTCAGA...AGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CCA 90 bp AGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCATTTGCACAAAACTTTTaGCATGAGGAGTTCCTATCA +
Preference number: 4 (lower is better)
Translates to: SPTSGATTCRLPKPSSTPFAQNF*HEEFLS
Trigger: TGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAA...TGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CCA 90 bp GCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACTCAAGGGTAGGCTGTaGCAGATTTTTCATATTAAC +
Preference number: 4 (lower is better)
Translates to: AISHPRSSFTSRHNGFCKLKGRL*QIFHIN
Trigger: GTTAATATGAAAAATCTGCCACAGCCTACCCTTGAG...TTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR CCA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATCTGTTTATCAGTCTCTaGGAAAGGGCTAATCTGCAT +
Preference number: 4 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYLFISL*ERANLH
Trigger: ATGCAGATTAGCCCTTTCCCAGAGACTGATAAACAG...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATAAACAAATGCTAGACTaGCAGCCCAGTCCATGCTAT +
Preference number: 4 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYKQMLD*QPSPCY
Trigger: ATAGCATGGACTGGGCTGCCAGTCTAGCATTTGTTT...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp TCTCCTTGGTATTGTCTGTATTTTAAGGCACTAAATGGATACTACCACTTGGTACACTGTGCTCCAGCCTaGGCAACAGCACAAGACTCT +
Preference number: 4 (lower is better)
Translates to: SPWYCLYFKALNGYYHLVHCAPA*ATAQDS
Trigger: AGAGTCTTGTGCTGTTGCCCAGGCTGGAGCACAGTG...TACCAAGTGGTAGTATCCATTTAGTGCCTTAAAATACAGACAATACCAAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR CAA 72 bp AGAAAGTTGTGTGAAGGACTCAGCCTCTCGGAATCTTaGCACAAAACTTTTGGCATGAGGAGTTCCTATCAC +
Preference number: 4 (lower is better)
Translates to: RKLCEGLSLSES*HKTFGMRSSYH
Trigger: GTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCTTCACACAACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TCGGAATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAATCCTAGCGACCTCTTaGAGCAATCCAAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: SESLHKTFGMRSSYHFLRILATS*SNPNKG
Trigger: GCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGAT...TCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461381.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp ATCTTTGAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAAATCCTAGCGACCTCTTaGAGCAATCCAAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: IFEVRHWLNPSDLLKQSKILATS*SNPNKG
Trigger: GCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGAT...TTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
ENST00000496206.5
CDS-3UTR TCA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATACAAAACTTTTGGCATaGGGAGTTCCTATCACTTTC +
Preference number: 4 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYTKLLA*GVPITF
Trigger: GAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGT...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR TCA 90 bp CTATGCACAGTACAGTGTGAGAGTCTCCACTTAGCACTGGTATCTGTAGCACTCCTTCTCTGTCTCAGATaGTGCTTTGAAGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: LCTVQCESLHLALVSVALLLCLR*CFEVLI
Trigger: TATCAAAACTTCAAAGCATCATCTGAGACAGAGAAG...GAGTGCTACAGATACCAGTGCTAAGTGGAGACTCTCACACTGTACTGTGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TTAGTATTCAGAGGCGGACCTATGTATAATGGAGCCAATAAGACCAAATTGACCATGCACAGTACAGTGTaGGAGTCTCCACTTAGCACT +
Preference number: 4 (lower is better)
Translates to: LVFRGGPMYNGANKTKLTMHSTV*ESPLST
Trigger: AGTGCTAAGTGGAGACTCTCACACTGTACTGTGCAT...GGTCAATTTGGTCTTATTGGCTCCATTATACATAGGTCCGCCTCTGAATACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR TCA 90 bp TCGGAATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAATGCACAGTACAGTGTaGGAGTCTCCACTTAGCACT +
Preference number: 4 (lower is better)
Translates to: SESLHKTFGMRSSYHFLRMHSTV*ESPLST
Trigger: AGTGCTAAGTGGAGACTCTCACACTGTACTGTGCAT...TCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp AGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGAAGTTTGTTACCATGCACAGTACAGTGTaGGAGTCTCCACTTAGCACT +
Preference number: 4 (lower is better)
Translates to: STLSFQMFKPVAFKKFVTMHSTV*ESPLST
Trigger: AGTGCTAAGTGGAGACTCTCACACTGTACTGTGCAT...GGTAACAAACTTCTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp GTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAAGGCTCTTGTATGACAGGCATTaGAACTCCACTATTCAAGAG +
Preference number: 4 (lower is better)
Translates to: VRHWLNPSDLLKQSKQRLLYDRH*NSTIQE
Trigger: CTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAA...GAGCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TTAGTATTCAGAGGCGGACCTATGTATAATGGAGCCAATAAGACCAAATTGACCCAAGAGGATTGGAAGTaGCACACAGGAGGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: LVFRGGPMYNGANKTKLTQEDWK*HTGGLK
Trigger: TTTGAGACCTCCTGTGTGTCACTTCCAATCCTCTTG...GGTCAATTTGGTCTTATTGGCTCCATTATACATAGGTCCGCCTCTGAATACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp ATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAACTCCACCACTGGCTaGTTGGAAGAAAACAACTCA +
Preference number: 4 (lower is better)
Translates to: ISLKRVDCNFLCGFLCLRNSTTG*LEENNS
Trigger: TGAGTTGTTTTCTTCCAATCAGCCAGTGGTGGAGTT...ACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469169.5
CDS-3UTR TCA 90 bp AAACCTTCATCAACACCAACTCCACCACTGGCTGACTGGGGACAACACATACTTTTGGTAGTTAAGGGCTaGTTTTCATTACTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: KPSSTPTPPLADWGQHILLVVKG*FSLLGR
Trigger: TCTTCCAAGTAATGAAAATCAGCCCTTAACTACCAA...AAGTATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000460410.5
ENST00000472637.5
ENST00000496340.1
CDS-3UTR GCA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATAAACGCTTTAAACATTaGTCAACCTGTTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYKRFKH*STCLRA
Trigger: GGCCCTCAAACAGGTTGAGCAATGTTTAAAGCGTTT...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp CCTGTGTGTCCTAATGCCATCAGAAGTGATAAAGTTGGTACTAGGATGTGGGTAAAACGCTTTAAACATTaGTCAACCTGTTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PVCPNAIRSDKVGTRMWVKRFKH*STCLRA
Trigger: GGCCCTCAAACAGGTTGAGCAATGTTTAAAGCGTTT...TACCCACATCCTAGTACCAACTTTATCACTTCTGATGGCATTAGGACACACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp GACTCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTAAGCGGAGCAACAACTTaGAGGCTCCCAAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: DSSLKTLLFFTGCPRSTLSGATT*RLPKPS
Trigger: TGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCT...TAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR GCA 90 bp ATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTTGTGTTTCAGCTGGTTaGAGAAAGCCCTCACATCAA +
Preference number: 4 (lower is better)
Translates to: ISLKRVDCNFLCGFLCLRCVSAG*RKPSHQ
Trigger: TTGATGTGAGGGCTTTCTGCAACCAGCTGAAACACA...ACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp TCCCTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACACTCCTGTGCAATGCTaGACTAAAGCAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SLVIQAVANLVDQFQHINTPVQC*TKAAPL
Trigger: CAGAGGAGCTGCTTTAGTGCAGCATTGCACAGGAGT...GTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR GCA 90 bp GAATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAAGAACTCCTGTGCAATGCTaGACTAAAGCAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ESLHKTFGMRSSYHFLRRTPVQC*TKAAPL
Trigger: CAGAGGAGCTGCTTTAGTGCAGCATTGCACAGGAGT...TCTTCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATTCAAGGAATTACATCTaGTTCTCAAGGGTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYSRNYI*FSRVGC
Trigger: ACAGCCTACCCTTGAGAAGCAGATGTAATTCCTTGA...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp TCTCCTTGGTATTGTCTGTATTTTAAGGCACTAAATGGATACTACCACTTGGTATTTCAGGTGTTTCCTTaGTATCTCCCACCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: SPWYCLYFKALNGYYHLVFQVFP*YLPPPL
Trigger: GAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAA...TACCAAGTGGTAGTATCCATTTAGTGCCTTAAAATACAGACAATACCAAGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp TTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTGTTTGAGGGCCAAATaGGGTTTGTGGCGGCCCATT +
Preference number: 4 (lower is better)
Translates to: FFEDSLILYWLSKIHIILCLRAK*GLWRPI
Trigger: AATGGGCCGCCACAAACCCCATTTGGCCCTCAAACA...CAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496206.5
CDS-3UTR CCA 90 bp TGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTCTGAGAAGAATACTTaGTTGTCTTTAGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: CFLAISHPRSSFTSRHNGSEKNT*LSLVWI
Trigger: AATCCAGACTAAAGACAACCAAGTATTCTTCTCAGA...ACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR CCA 90 bp CTATGCACAGTACAGTGTGAGAGTCTCCACTTAGCACTGGTATCTGTAGCACTCTTTGCACAAAACTTTTaGCATGAGGAGTTCCTATCA +
Preference number: 4 (lower is better)
Translates to: LCTVQCESLHLALVSVALFAQNF*HEEFLS
Trigger: TGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAA...GAGTGCTACAGATACCAGTGCTAAGTGGAGACTCTCACACTGTACTGTGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp CTTAGCACTGGTATCTGTAGCACTCTTCCGAGTCCCTTGAGAGAACTGCTGAATTTTGCACAAAACTTTTaGCATGAGGAGTTCCTATCA +
Preference number: 4 (lower is better)
Translates to: LSTGICSTLPSPLRELLNFAQNF*HEEFLS
Trigger: TGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAA...ATTCAGCAGTTCTCTCAAGGGACTCGGAAGAGTGCTACAGATACCAGTGCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATGAGCCACGAAGAAGGTaGTTGCAAATAGACGTTTTT +
Preference number: 4 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYEPRRR*LQIDVF
Trigger: AAAAACGTCTATTTGCAACCACCTTCTTCGTGGCTC...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp AGATCAGTTCTATGCACAGTACAGTGTGAGAGTCTCCACTTAGCACTGGTATCTGAGCCACGAAGAAGGTaGTTGCAAATAGACGTTTTT +
Preference number: 4 (lower is better)
Translates to: RSVLCTVQCESLHLALVSEPRRR*LQIDVF
Trigger: AAAAACGTCTATTTGCAACCACCTTCTTCGTGGCTC...AGATACCAGTGCTAAGTGGAGACTCTCACACTGTACTGTGCATAGAACTGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATTCTGTTATGATAGGGTaGCTGAGGAAAAGAAGGATG +
Preference number: 4 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYSVMIG*LRKRRM
Trigger: CATCCTTCTTTTCCTCAGCCACCCTATCATAACAGA...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp CCTGTGTGTCCTAATGCCATCAGAAGTGATAAAGTTGGTACTAGGATGTGGGTACTGTTTATCAGTCTCTaGGAAAGGGCTAATCTGCAT +
Preference number: 4 (lower is better)
Translates to: PVCPNAIRSDKVGTRMWVLFISL*ERANLH
Trigger: ATGCAGATTAGCCCTTTCCCAGAGACTGATAAACAG...TACCCACATCCTAGTACCAACTTTATCACTTCTGATGGCATTAGGACACACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATTTATATAACTGGATTTaGGGGCCACCTGGATCAAAA +
Preference number: 4 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYLYNWI*GPPGSK
Trigger: TTTTGATCCAGGTGGCCCCCAAATCCAGTTATATAA...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp GAATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAAGAATTGCTCAACCTGTTTaGGGGCCAAATGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: ESLHKTFGMRSSYHFLRRIAQPV*GPNGVC
Trigger: ACAAACCCCATTTGGCCCTCAAACAGGTTGAGCAAT...TCTTCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000461381.5
CDS-3UTR TCA 90 bp CATAACCTGCTCACCAGCCCAACCATCACAAGGTTTAAAATAATGAACTCTTGCAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: HNLLTSPTITRFKIMNSCNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...GCAAGAGTTCATTATTTTAAACCTTGTGATGGTTGGGCTGGTGAGCAGGTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp TGTTTCAGCTGGTTGCAGAAAGCCCTCACATCAAATTCTGATGACTCTTCTTTGAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: CFSWLQKALTSNSDDSSLNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...CAAAGAAGAGTCATCAGAATTTGATGTGAGGGCTTTCTGCAACCAGCTGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp CTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: LWQTSTLSFQMFKPVAFKNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...CTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TTAGTATTCAGAGGCGGACCTATGTATAATGGAGCCAATAAGACCAAATTGACCTCAAAACTGGTCTCCTaGGTAGCTTTGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: LVFRGGPMYNGANKTKLTSKLVS*VALCFS
Trigger: GCTGAAACACAAAGCTACTCAGGAGACCAGTTTTGA...GGTCAATTTGGTCTTATTGGCTCCATTATACATAGGTCCGCCTCTGAATACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000472637.5
CDS-3UTR TCA 90 bp CCTGTGTGTCCTAATGCCATCAGAAGTGATAAAGTTGGTACTAGGATGTGGGTAACAAAACTTTTGGCATaGGGAGTTCCTATCACTTTC +
Preference number: 4 (lower is better)
Translates to: PVCPNAIRSDKVGTRMWVTKLLA*GVPITF
Trigger: GAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGT...TACCCACATCCTAGTACCAACTTTATCACTTCTGATGGCATTAGGACACACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp TTCAGAAAGTTGTGTGAAGGACTCAGCCTCTCGGAATCTTTGCACAAAACTTTTGGCAAACTAGTACCTTaGGCTTCCAGATGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: FRKLCEGLSLSESLHKTFGKLVP*ASRCLS
Trigger: GCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCC...AAAAGTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCTTCACACAACTTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp ATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTGATGCTTTGAAGTTTTaGTACCTGAGCCACGAAGAA +
Preference number: 4 (lower is better)
Translates to: ISLKRVDCNFLCGFLCLRDALKF*YLSHEE
Trigger: TTCTTCGTGGCTCAGGTATCAAAACTTCAAAGCATC...ACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TCCGAGTCCCTTGAGAGAACTGCTGAATTTCCCTTAAAAGAGTCGACTGCAACTCTTCTCTGTCTCAGATaGTGCTTTGAAGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: SESLERTAEFPLKESTATLLCLR*CFEVLI
Trigger: TATCAAAACTTCAAAGCATCATCTGAGACAGAGAAG...AGTTGCAGTCGACTCTTTTAAGGGAAATTCAGCAGTTCTCTCAAGGGACTCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp CCTGTGTGTCCTAATGCCATCAGAAGTGATAAAGTTGGTACTAGGATGTGGGTATTGTATGACAGGCATTaGAACTCCACTATTCAAGAG +
Preference number: 4 (lower is better)
Translates to: PVCPNAIRSDKVGTRMWVLYDRH*NSTIQE
Trigger: CTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAA...TACCCACATCCTAGTACCAACTTTATCACTTCTGATGGCATTAGGACACACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp AGATCAGTTCTATGCACAGTACAGTGTGAGAGTCTCCACTTAGCACTGGTATCTTTGTATGACAGGCATTaGAACTCCACTATTCAAGAG +
Preference number: 4 (lower is better)
Translates to: RSVLCTVQCESLHLALVSLYDRH*NSTIQE
Trigger: CTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAA...AGATACCAGTGCTAAGTGGAGACTCTCACACTGTACTGTGCATAGAACTGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATAAATGTAGACTGAACTaGAATGAACTCCTGTGCAAT +
Preference number: 4 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYKCRLN*NELLCN
Trigger: ATTGCACAGGAGTTCATTTCAGTTCAGTCTACATTT...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR TCA 90 bp TCCGAGTCCCTTGAGAGAACTGCTGAATTTCCCTTAAAAGAGTCGACTGCAACTAAATGTAGACTGAACTaGAATGAACTCCTGTGCAAT +
Preference number: 4 (lower is better)
Translates to: SESLERTAEFPLKESTATKCRLN*NELLCN
Trigger: ATTGCACAGGAGTTCATTTCAGTTCAGTCTACATTT...AGTTGCAGTCGACTCTTTTAAGGGAAATTCAGCAGTTCTCTCAAGGGACTCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATCCAATAAGACCAAATTaGCCTTTCAGGTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYPIRPN*PFRCFL
Trigger: AAGGAAACACCTGAAAGGTCAATTTGGTCTTATTGG...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp TATAACTTGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCTTTTCTCATACTGTGCCTGTaGATTTCTTTGAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: YNLLKARIYSVCVCVCSFLILCL*ISLRRG
Trigger: TCCCCTCCTCAAAGAAATTCACAGGCACAGTATGAG...AAAAGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp CTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACAAGGAACATGTGAGACACTaGAGTCACCTCCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: LVIQAVANLVDQFQHINKEHVRH*SHLLRE
Trigger: TTCCCTGAGGAGGTGACTTCAGTGTCTCACATGTTC...CTTGTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp GAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAAGGCCATTCTGTTGTGATTaGTGTAAAGGACTGCACATA +
Preference number: 4 (lower is better)
Translates to: EVRHWLNPSDLLKQSKQRPFCCD*CKGLHI
Trigger: TATGTGCAGTCCTTTACAGCAATCACAACAGAATGG...CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496206.5
CDS-3UTR GCA 90 bp CTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGAAACGCTTTAAACATTaGTCAACCTGTTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LWQTSTLSFQMFKPVAFKKRFKH*STCLRA
Trigger: GGCCCTCAAACAGGTTGAGCAATGTTTAAAGCGTTT...CTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461381.5
CDS-3UTR GCA 90 bp TTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACAAGAGAACCCATAACCTaGTCACCAGCCCAACCATCA +
Preference number: 4 (lower is better)
Translates to: LKTLLFFTGCPRSTLFCTREPIT*SPAQPS
Trigger: TGATGGTTGGGCTGGTGAGCAGGTTATGGGTTCTCT...TGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR GCA 90 bp AGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGAAGTTTGTTACCCCTGCACCATACAACTaGCATCTGGATTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: STLSFQMFKPVAFKKFVTPAPYN*HLDFFR
Trigger: TCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGG...GGTAACAAACTTCTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp TGGCCCCTGTTTATCAGTCTCTGGGAAAGGGCTAATCTGCATCTTTTAGCAACCCTGTTTTTATTTATTTaGATCACCGTCCACGAATCA +
Preference number: 4 (lower is better)
Translates to: WPLFISLWERANLHLLATLFLFI*ITVHES
Trigger: TGATTCGTGGACGGTGATGCAAATAAATAAAAACAG...GGTTGCTAAAAGATGCAGATTAGCCCTTTCCCAGAGACTGATAAACAGGGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp TTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACAACTCCTGTGCAATGCTaGACTAAAGCAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LKTLLFFTGCPRSTLFCTTPVQC*TKAAPL
Trigger: CAGAGGAGCTGCTTTAGTGCAGCATTGCACAGGAGT...TGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp TTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTATCAAGGAATTACATCTaGTTCTCAAGGGTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: FPLKESTATFSVVSFVSVSRNYI*FSRVGC
Trigger: ACAGCCTACCCTTGAGAAGCAGATGTAATTCCTTGA...TACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
CDS-3UTR GCA 90 bp TCCCTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACGACCCAGGGCTTATATaGCATAGAGAAAAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: SLVIQAVANLVDQFQHINDPGLI*HREKGV
Trigger: TACCCCCTTTTCTCTATGGCATATAAGCCCTGGGTC...GTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp AAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGAAACGCTTTAAACATTaGTCAACCAAGGGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: KTLLFFTGCPRSTLFCTLKRFKH*STKGRA
Trigger: GGCGCGGCCCTTGGTTGAGCAATGTTTAAAGCGTTT...CAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp TCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCAAACGCTTTAAACATTaGTCAACCAAGGGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: SSLKTLLFFTGCPRSTLFKRFKH*STKGRA
Trigger: GGCGCGGCCCTTGGTTGAGCAATGTTTAAAGCGTTT...GAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp TGGTTGCAAATAGACGTTTTTATGCACTCTAGTTTCTTTGGCAAACTAGTACCTAAACGCTTTAAACATTaGTCAACCAAGGGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: WLQIDVFMHSSFFGKLVPKRFKH*STKGRA
Trigger: GGCGCGGCCCTTGGTTGAGCAATGTTTAAAGCGTTT...AGGTACTAGTTTGCCAAAGAAACTAGAGTGCATAAAAACGTCTATTTGCAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp ATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAAGAATCTTGGTGACATAACCTaGTCACCAGCCCAACCATCA +
Preference number: 4 (lower is better)
Translates to: IFAQNFWHEEFLSLSEKNLGDIT*SPAQPS
Trigger: TGATGGTTGGGCTGGTGAGCAGGTTATGTCACCAAG...ATTCTTCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462295.5
CDS-3UTR CCA 90 bp TTAGTATTCAGAGGCGGACCTATGTATAATGGAGCCAATAAGACCAAATTGACCTCTGCATCTAAGGTTTaGCTCTTCAGCGACAGTATG +
Preference number: 4 (lower is better)
Translates to: LVFRGGPMYNGANKTKLTSASKV*LFSDSM
Trigger: CATACTGTCGCTGAAGAGCCAAACCTTAGATGCAGA...GGTCAATTTGGTCTTATTGGCTCCATTATACATAGGTCCGCCTCTGAATACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp TTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTATTTGAAGTAAGGCATTaGTTGAATCCTAGCGACCTC +
Preference number: 4 (lower is better)
Translates to: FPLKESTATFSVVSFVSVFEVRH*LNPSDL
Trigger: GAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAA...TACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp GCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAATCTGAGAAGAATACTTaGTTGTCTTTAGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: AISHPRSSFTSRHNGFCKSEKNT*LSLVWI
Trigger: AATCCAGACTAAAGACAACCAAGTATTCTTCTCAGA...TTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR CCA 90 bp CTATGCACAGTACAGTGTGAGAGTCTCCACTTAGCACTGGTATCTGTAGCACTCTCTGAGAAGAATACTTaGTTGTCTTTAGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: LCTVQCESLHLALVSVALSEKNT*LSLVWI
Trigger: AATCCAGACTAAAGACAACCAAGTATTCTTCTCAGA...GAGTGCTACAGATACCAGTGCTAAGTGGAGACTCTCACACTGTACTGTGCATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp TTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAGAGCCACGAAGAAGGTaGTTGCAAATAGACGTTTTT +
Preference number: 4 (lower is better)
Translates to: FPLKESTATFSVVSFVSVEPRRR*LQIDVF
Trigger: AAAAACGTCTATTTGCAACCACCTTCTTCGTGGCTC...TACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp TTGCTCCTGCACCATACAACTGCCATCTGGATTTCTTCAGAAAGTTGTGTGAAGCTCAAGGGTAGGCTGTaGCAGATTTTTCATATTAAC +
Preference number: 4 (lower is better)
Translates to: LLLHHTTAIWISSESCVKLKGRL*QIFHIN
Trigger: GTTAATATGAAAAATCTGCCACAGCCTACCCTTGAG...CTTCACACAACTTTCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGGAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
CDS-3UTR CCA 90 bp TTAGTATTCAGAGGCGGACCTATGTATAATGGAGCCAATAAGACCAAATTGACCCACTGCTCTTATAAATaGCCTGTGTGTCCTAATGCC +
Preference number: 4 (lower is better)
Translates to: LVFRGGPMYNGANKTKLTHCSYK*PVCPNA
Trigger: GGCATTAGGACACACAGGCCATTTATAAGAGCAGTG...GGTCAATTTGGTCTTATTGGCTCCATTATACATAGGTCCGCCTCTGAATACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp TCTCCTTGGTATTGTCTGTATTTTAAGGCACTAAATGGATACTACCACTTGGTAATTGCTCAACCTGTTTaGGGGCCAAATGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: SPWYCLYFKALNGYYHLVIAQPV*GPNGVC
Trigger: ACAAACCCCATTTGGCCCTCAAACAGGTTGAGCAAT...TACCAAGTGGTAGTATCCATTTAGTGCCTTAAAATACAGACAATACCAAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp GAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTATTGCTCAACCTGTTTaGGGGCCAAATGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: EDSLILYWLSKIHIILYIIAQPV*GPNGVC
Trigger: ACAAACCCCATTTGGCCCTCAAACAGGTTGAGCAAT...AATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496206.5
CDS-3UTR TCA 90 bp GCTGAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCAAACAGGTCTTGAATTaGGCCCTCCAAATTCATGTT +
Preference number: 4 (lower is better)
Translates to: AEFPLKESTATFSVVSFVKQVLN*ALQIHV
Trigger: AACATGAATTTGGAGGGCTCAATTCAAGACCTGTTT...GACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp AAAATCTTTGAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: KIFEVRHWLNPSDLLKQSNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...GGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
ENST00000496206.5
CDS-3UTR TCA 90 bp TTCCTATCACTTTCTGAGAAGAATACTTGGTTGTCTTTAGTCTGGATTGAGAACATCCTAGCGACCTCTTaGAGCAATCCAAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: FLSLSEKNTWLSLVWIENILATS*SNPNKG
Trigger: GCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGAT...GTTCTCAATCCAGACTAAAGACAACCAAGTATTCTTCTCAGAAAGTGATAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461381.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTATCCTAGCGACCTCTTaGAGCAATCCAAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: SLKTLLFFTGCPRSTLFCILATS*SNPNKG
Trigger: GCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGAT...ACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
CDS-3UTR TCA 90 bp TATAACTTGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCTTTTGGCAAACTAGTACCTTaGGCTTCCAGATGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: YNLLKARIYSVCVCVCSFGKLVP*ASRCLS
Trigger: GCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCC...AAAAGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp CTCTGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGATCTTCTCTGTCTCGGCAAACTAGTACCTTaGGCTTCCAGATGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: LCGFLCLRKNLFCDLLCLGKLVP*ASRCLS
Trigger: GCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCC...GAGACAGAGAAGATCACAGAATAAATTTTTACGGAGACAAAGGAAACCACAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TTAGTATTCAGAGGCGGACCTATGTATAATGGAGCCAATAAGACCAAATTGACCGATGCTTTGAAGTTTTaGTACCTGAGCCACGAAGAA +
Preference number: 4 (lower is better)
Translates to: LVFRGGPMYNGANKTKLTDALKF*YLSHEE
Trigger: TTCTTCGTGGCTCAGGTATCAAAACTTCAAAGCATC...GGTCAATTTGGTCTTATTGGCTCCATTATACATAGGTCCGCCTCTGAATACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR TCA 90 bp TCGGAATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAGATGCTTTGAAGTTTTaGTACCTGAGCCACGAAGAA +
Preference number: 4 (lower is better)
Translates to: SESLHKTFGMRSSYHFLRDALKF*YLSHEE
Trigger: TTCTTCGTGGCTCAGGTATCAAAACTTCAAAGCATC...TCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTCCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp AGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGAAGTTTGTTACCGATGCTTTGAAGTTTTaGTACCTGAGCCACGAAGAA +
Preference number: 4 (lower is better)
Translates to: STLSFQMFKPVAFKKFVTDALKF*YLSHEE
Trigger: TTCTTCGTGGCTCAGGTATCAAAACTTCAAAGCATC...GGTAACAAACTTCTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATCTTCTCTGTCTCAGATaGTGCTTTGAAGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYLLCLR*CFEVLI
Trigger: TATCAAAACTTCAAAGCATCATCTGAGACAGAGAAG...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp ATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAAGAATATGCACAGTACAGTGTaGGAGTCTCCACTTAGCACT +
Preference number: 4 (lower is better)
Translates to: IFAQNFWHEEFLSLSEKNMHSTV*ESPLST
Trigger: AGTGCTAAGTGGAGACTCTCACACTGTACTGTGCAT...ATTCTTCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp CTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGATCTTCATGCACAGTACAGTGTaGGAGTCTCCACTTAGCACT +
Preference number: 4 (lower is better)
Translates to: LLFFTGCPRSTLFCTLIFMHSTV*ESPLST
Trigger: AGTGCTAAGTGGAGACTCTCACACTGTACTGTGCAT...GAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCATGCACAGTACAGTGTaGGAGTCTCCACTTAGCACT +
Preference number: 4 (lower is better)
Translates to: SSLKTLLFFTGCPRSTLFMHSTV*ESPLST
Trigger: AGTGCTAAGTGGAGACTCTCACACTGTACTGTGCAT...GAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp CCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAAAATTGTATGACAGGCATTaGAACTCCACTATTCAAGAG +
Preference number: 4 (lower is better)
Translates to: PLKESTATFSVVSFVSVKLYDRH*NSTIQE
Trigger: CTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAA...TTTTACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATTTCTACTTAGAACACTaGACTAGCCTTGTTAATCAC +
Preference number: 4 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYFYLEH*TSLVNH
Trigger: GTGATTAACAAGGCTAGTTCAGTGTTCTAAGTAGAA...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp CTATCACTTTCTGAGAAGAATACTTGGTTGTCTTTAGTCTGGATTGAGAACATTACTCCTGTGCAATGCTaGACTAAAGCAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSLSEKNTWLSLVWIENITPVQC*TKAAPL
Trigger: CAGAGGAGCTGCTTTAGTGCAGCATTGCACAGGAGT...AATGTTCTCAATCCAGACTAAAGACAACCAAGTATTCTTCTCAGAAAGTGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp AGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGAAGTTTGTTACCTCAAGGAATTACATCTaGTTCTCAAGGGTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: STLSFQMFKPVAFKKFVTSRNYI*FSRVGC
Trigger: ACAGCCTACCCTTGAGAAGCAGATGTAATTCCTTGA...GGTAACAAACTTCTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
CDS-3UTR GCA 90 bp CTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGATCTTCATAAACGCTTTAAACATTaGTCAACCAAGGGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: LILYWLSKIHIILYIDLHKRFKH*STKGRA
Trigger: GGCGCGGCCCTTGGTTGAGCAATGTTTAAAGCGTTT...ATGAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000494164.5
CDS-3UTR GCA 90 bp TGGAAGAAAACAACTCAAACAGGTCTTGAATTGAGCCCTCCAAATTCATGTTTTGTACATACCATAACCTaGTCACCAGCCCAACCATCA +
Preference number: 4 (lower is better)
Translates to: WKKTTQTGLELSPPNSCFVHTIT*SPAQPS
Trigger: TGATGGTTGGGCTGGTGAGCAGGTTATGGTATGTAC...AAAACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTTGTTTTCTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470663.1
CDS-3UTR CCA 90 bp GAATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAAGATCTGCATCTAAGGTTTaGCTCTTCAGCGACAGTATG +
Preference number: 4 (lower is better)
Translates to: ESLHKTFGMRSSYHFLRRSASKV*LFSDSM
Trigger: CATACTGTCGCTGAAGAGCCAAACCTTAGATGCAGA...TCTTCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461381.5
CDS-3UTR CCA 90 bp TTCAGAAAGTTGTGTGAAGGACTCAGCCTCTCGGAATCTTTGCACAAAACTTTTTTTGAAGTAAGGCATTaGTTGAATCCTAGCGACCTC +
Preference number: 4 (lower is better)
Translates to: FRKLCEGLSLSESLHKTFFEVRH*LNPSDL
Trigger: GAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAA...AAAAGTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCTTCACACAACTTTCTGAA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000461381.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp TTTGAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAATTTGAAGTAAGGCATTaGTTGAATCCTAGCGACCTC +
Preference number: 4 (lower is better)
Translates to: FEVRHWLNPSDLLKQSKQFEVRH*LNPSDL
Trigger: GAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAA...TTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
ENST00000496206.5
CDS-3UTR CCA 90 bp CTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACAAGGCTTTGTGTTTCAGCTaGTTGCAGAAAGCCCTCACA +
Preference number: 4 (lower is better)
Translates to: LVIQAVANLVDQFQHINKALCFS*LQKALT
Trigger: TGTGAGGGCTTTCTGCAACCAGCTGAAACACAAAGC...CTTGTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000472637.5
CDS-3UTR CCA 90 bp TTGCTCCTGCACCATACAACTGCCATCTGGATTTCTTCAGAAAGTTGTGTGAAGTTTGCACAAAACTTTTaGCATGAGGAGTTCCTATCA +
Preference number: 4 (lower is better)
Translates to: LLLHHTTAIWISSESCVKFAQNF*HEEFLS
Trigger: TGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAA...CTTCACACAACTTTCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGGAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp TTCAGAAAGTTGTGTGAAGGACTCAGCCTCTCGGAATCTTTGCACAAAACTTTTGAGCCACGAAGAAGGTaGTTGCAAATAGACGTTTTT +
Preference number: 4 (lower is better)
Translates to: FRKLCEGLSLSESLHKTFEPRRR*LQIDVF
Trigger: AAAAACGTCTATTTGCAACCACCTTCTTCGTGGCTC...AAAAGTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCTTCACACAACTTTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp ATCTTTGAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAAGAGCCACGAAGAAGGTaGTTGCAAATAGACGTTTTT +
Preference number: 4 (lower is better)
Translates to: IFEVRHWLNPSDLLKQSKEPRRR*LQIDVF
Trigger: AAAAACGTCTATTTGCAACCACCTTCTTCGTGGCTC...TTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp AGAACTGCTGAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCCTCAAGGGTAGGCTGTaGCAGATTTTTCATATTAAC +
Preference number: 4 (lower is better)
Translates to: RTAEFPLKESTATFSVVSLKGRL*QIFHIN
Trigger: GTTAATATGAAAAATCTGCCACAGCCTACCCTTGAG...GGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTCAGCAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
CDS-3UTR TCA 90 bp TTAGTATTCAGAGGCGGACCTATGTATAATGGAGCCAATAAGACCAAATTGACCAAACAGGTCTTGAATTaGGCCCTCCAAATTCATGTT +
Preference number: 4 (lower is better)
Translates to: LVFRGGPMYNGANKTKLTKQVLN*ALQIHV
Trigger: AACATGAATTTGGAGGGCTCAATTCAAGACCTGTTT...GGTCAATTTGGTCTTATTGGCTCCATTATACATAGGTCCGCCTCTGAATACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR TCA 90 bp TTTCTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAACAGGTCTTGAATTaGGCCCTCCAAATTCATGTT +
Preference number: 4 (lower is better)
Translates to: FLWQTSTLSFQMFKPVAFKQVLN*ALQIHV
Trigger: AACATGAATTTGGAGGGCTCAATTCAAGACCTGTTT...AAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TCTGATGACTCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCAAACAGGTCTTGAATTaGGCCCTCCAAATTCATGTT +
Preference number: 4 (lower is better)
Translates to: SDDSSLKTLLFFTGCPRSKQVLN*ALQIHV
Trigger: AACATGAATTTGGAGGGCTCAATTCAAGACCTGTTT...GGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGAGTCATCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
CDS-3UTR TCA 90 bp CTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGATCTTCATATCCTAGCGACCTCTTaGAGCAATCCAAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: LILYWLSKIHIILYIDLHILATS*SNPNKG
Trigger: GCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGAT...ATGAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000494164.5
ENST00000496206.5
CDS-3UTR TCA 90 bp TTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATCAAAACTGGTCTCCTaGGTAGCTTTGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: LKTLLFFTGCPRSTLFCTSKLVS*VALCFS
Trigger: GCTGAAACACAAAGCTACTCAGGAGACCAGTTTTGA...TGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TTAGTATTCAGAGGCGGACCTATGTATAATGGAGCCAATAAGACCAAATTGACCGTTCCTATCACTTTCTaGGAAGAATACTTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: LVFRGGPMYNGANKTKLTVPITF*EEYLVV
Trigger: GACAACCAAGTATTCTTCTCAGAAAGTGATAGGAAC...GGTCAATTTGGTCTTATTGGCTCCATTATACATAGGTCCGCCTCTGAATACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR TCA 90 bp TTCAGAAAGTTGTGTGAAGGACTCAGCCTCTCGGAATCTTTGCACAAAACTTTTGTTCCTATCACTTTCTaGGAAGAATACTTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: FRKLCEGLSLSESLHKTFVPITF*EEYLVV
Trigger: GACAACCAAGTATTCTTCTCAGAAAGTGATAGGAAC...AAAAGTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCTTCACACAACTTTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp AGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGAAGTTTGTTACCGTTCCTATCACTTTCTaGGAAGAATACTTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: STLSFQMFKPVAFKKFVTVPITF*EEYLVV
Trigger: GACAACCAAGTATTCTTCTCAGAAAGTGATAGGAAC...GGTAACAAACTTCTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TTTGAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAGTTCCTATCACTTTCTaGGAAGAATACTTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: FEVRHWLNPSDLLKQSKQVPITF*EEYLVV
Trigger: GACAACCAAGTATTCTTCTCAGAAAGTGATAGGAAC...TTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TTCAGAAAGTTGTGTGAAGGACTCAGCCTCTCGGAATCTTTGCACAAAACTTTTACAAAACTTTTGGCATaGGGAGTTCCTATCACTTTC +
Preference number: 4 (lower is better)
Translates to: FRKLCEGLSLSESLHKTFTKLLA*GVPITF
Trigger: GAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGT...AAAAGTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCTTCACACAACTTTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TCGGAATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAACAAAACTTTTGGCATaGGGAGTTCCTATCACTTTC +
Preference number: 4 (lower is better)
Translates to: SESLHKTFGMRSSYHFLRTKLLA*GVPITF
Trigger: GAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGT...TCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGGGCAAACTAGTACCTTaGGCTTCCAGATGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: FFEDSLILYWLSKIHIILGKLVP*ASRCLS
Trigger: GCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCC...CAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp AAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGGGCAAACTAGTACCTTaGGCTTCCAGATGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: KTLLFFTGCPRSTLFCTLGKLVP*ASRCLS
Trigger: GCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCC...CAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp CCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAAAACTTCTCTGTCTCAGATaGTGCTTTGAAGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: PLKESTATFSVVSFVSVKLLCLR*CFEVLI
Trigger: TATCAAAACTTCAAAGCATCATCTGAGACAGAGAAG...TTTTACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TCGGAATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGATTGTATGACAGGCATTaGAACTCCACTATTCAAGAG +
Preference number: 4 (lower is better)
Translates to: SESLHKTFGMRSSYHFLRLYDRH*NSTIQE
Trigger: CTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAA...TCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp CTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGTTCTACTTAGAACACTaGACTAGCCTTGTTAATCAC +
Preference number: 4 (lower is better)
Translates to: LWQTSTLSFQMFKPVAFKFYLEH*TSLVNH
Trigger: GTGATTAACAAGGCTAGTTCAGTGTTCTAAGTAGAA...CTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp ATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTTTCTACTTAGAACACTaGACTAGCCTTGTTAATCAC +
Preference number: 4 (lower is better)
Translates to: ISLKRVDCNFLCGFLCLRFYLEH*TSLVNH
Trigger: GTGATTAACAAGGCTAGTTCAGTGTTCTAAGTAGAA...ACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TCTCCTTGGTATTGTCTGTATTTTAAGGCACTAAATGGATACTACCACTTGGTAGCAGTGACTTTAGTATaGAGGCCAAGAGGATTGGAA +
Preference number: 4 (lower is better)
Translates to: SPWYCLYFKALNGYYHLVAVTLV*RPRGLE
Trigger: TTCCAATCCTCTTGGCCTTCATACTAAAGTCACTGC...TACCAAGTGGTAGTATCCATTTAGTGCCTTAAAATACAGACAATACCAAGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp TTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTATTGGTAGTTAAGGGCTaGTTTTCATTACTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: FPLKESTATFSVVSFVSVLVVKG*FSLLGR
Trigger: TCTTCCAAGTAATGAAAATCAGCCCTTAACTACCAA...TACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472637.5
CDS-3UTR GCA 90 bp TCGGAATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGACCATTCTGTTGTGATTaGTGTAAAGGACTGCACATA +
Preference number: 4 (lower is better)
Translates to: SESLHKTFGMRSSYHFLRPFCCD*CKGLHI
Trigger: TATGTGCAGTCCTTTACAGCAATCACAACAGAATGG...TCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461381.5
CDS-3UTR GCA 90 bp TCTCCTTGGTATTGTCTGTATTTTAAGGCACTAAATGGATACTACCACTTGGTATGTGTTTCAGCTGGTTaGAGAAAGCCCTCACATCAA +
Preference number: 4 (lower is better)
Translates to: SPWYCLYFKALNGYYHLVCVSAG*RKPSHQ
Trigger: TTGATGTGAGGGCTTTCTGCAACCAGCTGAAACACA...TACCAAGTGGTAGTATCCATTTAGTGCCTTAAAATACAGACAATACCAAGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp ATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAAGAATTGTGTTTCAGCTGGTTaGAGAAAGCCCTCACATCAA +
Preference number: 4 (lower is better)
Translates to: IFAQNFWHEEFLSLSEKNCVSAG*RKPSHQ
Trigger: TTGATGTGAGGGCTTTCTGCAACCAGCTGAAACACA...ATTCTTCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp ACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGATCTGTGTTTCAGCTGGTTaGAGAAAGCCCTCACATCAA +
Preference number: 4 (lower is better)
Translates to: TATFSVVSFVSVKIYSVICVSAG*RKPSHQ
Trigger: TTGATGTGAGGGCTTTCTGCAACCAGCTGAAACACA...GATCACAGAATAAATTTTTACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp TCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTGTTTCAGCTGGTTaGAGAAAGCCCTCACATCAA +
Preference number: 4 (lower is better)
Translates to: SSLKTLLFFTGCPRSTLFCVSAG*RKPSHQ
Trigger: TTGATGTGAGGGCTTTCTGCAACCAGCTGAAACACA...GAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp TGGTTGCAAATAGACGTTTTTATGCACTCTAGTTTCTTTGGCAAACTAGTACCTCCTGCACCATACAACTaGCATCTGGATTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: WLQIDVFMHSSFFGKLVPPAPYN*HLDFFR
Trigger: TCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGG...AGGTACTAGTTTGCCAAAGAAACTAGAGTGCATAAAAACGTCTATTTGCAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp TTGCTCCTGCACCATACAACTGCCATCTGGATTTCTTCAGAAAGTTGTGTGAAGCTGTTTTTATTTATTTaGATCACCGTCCACGAATCA +
Preference number: 4 (lower is better)
Translates to: LLLHHTTAIWISSESCVKLFLFI*ITVHES
Trigger: TGATTCGTGGACGGTGATGCAAATAAATAAAAACAG...CTTCACACAACTTTCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGGAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp TATAACTTGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCTTTTTCAAGGAATTACATCTaGTTCTCAAGGGTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: YNLLKARIYSVCVCVCSFSRNYI*FSRVGC
Trigger: ACAGCCTACCCTTGAGAAGCAGATGTAATTCCTTGA...AAAAGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp CTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACAAGGGAGGTCTCAAACACTaGTCTTATAAATGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LVIQAVANLVDQFQHINKGGLKH*SYKWPV
Trigger: CACAGGCCATTTATAAGAGCAGTGTTTGAGACCTCC...CTTGTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp GAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTTCTGCATCTAAGGTTTaGCTCTTCAGCGACAGTATG +
Preference number: 4 (lower is better)
Translates to: EDSLILYWLSKIHIILYISASKV*LFSDSM
Trigger: CATACTGTCGCTGAAGAGCCAAACCTTAGATGCAGA...AATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496206.5
CDS-3UTR CCA 90 bp GACTCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTTGAAGTAAGGCATTaGTTGAATCCTAGCGACCTC +
Preference number: 4 (lower is better)
Translates to: DSSLKTLLFFTGCPRSTLFEVRH*LNPSDL
Trigger: GAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAA...TAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
CDS-3UTR CCA 90 bp GAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCTCTCTTATTCTTTACTaGCTGTCCAAGATCCACATT +
Preference number: 4 (lower is better)
Translates to: EFPLKESTATFSVVSFVSSLILY*LSKIHI
Trigger: AATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGA...GGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp CTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGTCTCTTATTCTTTACTaGCTGTCCAAGATCCACATT +
Preference number: 4 (lower is better)
Translates to: LWQTSTLSFQMFKPVAFKSLILY*LSKIHI
Trigger: AATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGA...CTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp TTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTATTTGCACAAAACTTTTaGCATGAGGAGTTCCTATCA +
Preference number: 4 (lower is better)
Translates to: FPLKESTATFSVVSFVSVFAQNF*HEEFLS
Trigger: TGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAA...TACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp TTCAGAAAGTTGTGTGAAGGACTCAGCCTCTCGGAATCTTTGCACAAAACTTTTCTCAAGGGTAGGCTGTaGCAGATTTTTCATATTAAC +
Preference number: 4 (lower is better)
Translates to: FRKLCEGLSLSESLHKTFLKGRL*QIFHIN
Trigger: GTTAATATGAAAAATCTGCCACAGCCTACCCTTGAG...AAAAGTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCTTCACACAACTTTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
CDS-3UTR CCA 90 bp TCCCTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACTCTGTTATGATAGGGTaGCTGAGGAAAAGAAGGATG +
Preference number: 4 (lower is better)
Translates to: SLVIQAVANLVDQFQHINSVMIG*LRKRRM
Trigger: CATCCTTCTTTTCCTCAGCCACCCTATCATAACAGA...GTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp TCTCCTTGGTATTGTCTGTATTTTAAGGCACTAAATGGATACTACCACTTGGTAGGCTACTTAGGGGACTaGGTGCATGAATATAGACAA +
Preference number: 4 (lower is better)
Translates to: SPWYCLYFKALNGYYHLVGYLGD*VHEYRQ
Trigger: TTGTCTATATTCATGCACCCAGTCCCCTAAGTAGCC...TACCAAGTGGTAGTATCCATTTAGTGCCTTAAAATACAGACAATACCAAGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR CAA 72 bp AAAGGCAAGAATGCTGTTTACAACTTAGCCTATAACTaGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: KGKNAVYNLAYN*LKARIYSVCVC
Trigger: ACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATAGGCTAAGTTGTAAACAGCATTCTTGCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp ATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAAGAATAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: IFAQNFWHEEFLSLSEKNNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...ATTCTTCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp GAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: EDSLILYWLSKIHIILYINSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...AATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
CDS-3UTR TCA 90 bp TTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: FFEDSLILYWLSKIHIILNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...CAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
CDS-3UTR TCA 90 bp GAGGAGTTCCTATCACTTTCTGAGAAGAATACTTGGTTGTCTTTAGTCTGGATTGTTCCTATCACTTTCTaGGAAGAATACTTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: EEFLSLSEKNTWLSLVWIVPITF*EEYLVV
Trigger: GACAACCAAGTATTCTTCTCAGAAAGTGATAGGAAC...AATCCAGACTAAAGACAACCAAGTATTCTTCTCAGAAAGTGATAGGAACTCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp GAATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAAGAACAAAACTTTTGGCATaGGGAGTTCCTATCACTTTC +
Preference number: 4 (lower is better)
Translates to: ESLHKTFGMRSSYHFLRRTKLLA*GVPITF
Trigger: GAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGT...TCTTCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TGGTTGCAAATAGACGTTTTTATGCACTCTAGTTTCTTTGGCAAACTAGTACCTGATGCTTTGAAGTTTTaGTACCTGAGCCACGAAGAA +
Preference number: 4 (lower is better)
Translates to: WLQIDVFMHSSFFGKLVPDALKF*YLSHEE
Trigger: TTCTTCGTGGCTCAGGTATCAAAACTTCAAAGCATC...AGGTACTAGTTTGCCAAAGAAACTAGAGTGCATAAAAACGTCTATTTGCAACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp CTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGATCTTCGATGCTTTGAAGTTTTaGTACCTGAGCCACGAAGAA +
Preference number: 4 (lower is better)
Translates to: LLFFTGCPRSTLFCTLIFDALKF*YLSHEE
Trigger: TTCTTCGTGGCTCAGGTATCAAAACTTCAAAGCATC...GAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TCCCTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACTTGTATGACAGGCATTaGAACTCCACTATTCAAGAG +
Preference number: 4 (lower is better)
Translates to: SLVIQAVANLVDQFQHINLYDRH*NSTIQE
Trigger: CTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAA...GTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR TCA 90 bp ATCTTTGAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAATTCTACTTAGAACACTaGACTAGCCTTGTTAATCAC +
Preference number: 4 (lower is better)
Translates to: IFEVRHWLNPSDLLKQSKFYLEH*TSLVNH
Trigger: GTGATTAACAAGGCTAGTTCAGTGTTCTAAGTAGAA...TTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TCCCTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACCCAATAAGACCAAATTaGCCTTTCAGGTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SLVIQAVANLVDQFQHINPIRPN*PFRCFL
Trigger: AAGGAAACACCTGAAAGGTCAATTTGGTCTTATTGG...GTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR TCA 90 bp TCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGCCAATAAGACCAAATTaGCCTTTCAGGTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: STATFSVVSFVSVKIYSVPIRPN*PFRCFL
Trigger: AAGGAAACACCTGAAAGGTCAATTTGGTCTTATTGG...CACAGAATAAATTTTTACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469809.5
ENST00000472637.5
CDS-3UTR TCA 90 bp TCCCTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACCCCTGGTTTTTCCAATaGAAGATAAGCTCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: SLVIQAVANLVDQFQHINPWFFQ*KISSKV
Trigger: AACTTTGGAGCTTATCTTTCATTGGAAAAACCAGGG...GTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp TCTCCTTGGTATTGTCTGTATTTTAAGGCACTAAATGGATACTACCACTTGGTACAGAAGATGGGAAAATaGGAGGAGATGAAGATACTC +
Preference number: 4 (lower is better)
Translates to: SPWYCLYFKALNGYYHLVQKMGK*EEMKIL
Trigger: GAGTATCTTCATCTCCTCTCATTTTCCCATCTTCTG...TACCAAGTGGTAGTATCCATTTAGTGCCTTAAAATACAGACAATACCAAGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp TCCCTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACTTCTTTAATTACAGCTaGAATGCAAAGGTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: SLVIQAVANLVDQFQHINFFNYS*NAKVKG
Trigger: GCCCTTGACCTTTGCATTGCAGCTGTAATTAAAGAA...GTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp TCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCAAACGCTTTAAACATTaGTCAACCTGTTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSLKTLLFFTGCPRSTLFKRFKH*STCLRA
Trigger: GGCCCTCAAACAGGTTGAGCAATGTTTAAAGCGTTT...GAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496206.5
CDS-3UTR GCA 90 bp GCTGAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCCTGTTTTTATTTATTTaGATCACCGTCCACGAATCA +
Preference number: 4 (lower is better)
Translates to: AEFPLKESTATFSVVSFVLFLFI*ITVHES
Trigger: TGATTCGTGGACGGTGATGCAAATAAATAAAAACAG...GACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp TGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGATCTTCTCTGTCTCAGATTTGAAGTAAGGCATTaGTTGAATCCTAGCGACCTC +
Preference number: 4 (lower is better)
Translates to: CGFLCLRKNLFCDLLCLRFEVRH*LNPSDL
Trigger: GAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAA...TCTGAGACAGAGAAGATCACAGAATAAATTTTTACGGAGACAAAGGAAACCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp CTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGATCTTCTTTGAAGTAAGGCATTaGTTGAATCCTAGCGACCTC +
Preference number: 4 (lower is better)
Translates to: LLFFTGCPRSTLFCTLIFFEVRH*LNPSDL
Trigger: GAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAA...GAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000494164.5
ENST00000496206.5
CDS-3UTR CCA 90 bp TTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTTTGAAGTAAGGCATTaGTTGAATCCTAGCGACCTC +
Preference number: 4 (lower is better)
Translates to: FFEDSLILYWLSKIHIILFEVRH*LNPSDL
Trigger: GAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAA...CAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
CDS-3UTR CCA 90 bp AGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGAAGTTTGTTACCTCTCTTATTCTTTACTaGCTGTCCAAGATCCACATT +
Preference number: 4 (lower is better)
Translates to: STLSFQMFKPVAFKKFVTSLILY*LSKIHI
Trigger: AATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGA...GGTAACAAACTTCTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp TCGGAATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGATCTCTTATTCTTTACTaGCTGTCCAAGATCCACATT +
Preference number: 4 (lower is better)
Translates to: SESLHKTFGMRSSYHFLRSLILY*LSKIHI
Trigger: AATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGA...TCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTCCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp CCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAAAATCTGAGAAGAATACTTaGTTGTCTTTAGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: PLKESTATFSVVSFVSVKSEKNT*LSLVWI
Trigger: AATCCAGACTAAAGACAACCAAGTATTCTTCTCAGA...TTTTACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp GAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCTCTGAGAAGAATACTTaGTTGTCTTTAGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: EFPLKESTATFSVVSFVSSEKNT*LSLVWI
Trigger: AATCCAGACTAAAGACAACCAAGTATTCTTCTCAGA...GGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp TCGGAATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGATTTGCACAAAACTTTTaGCATGAGGAGTTCCTATCA +
Preference number: 4 (lower is better)
Translates to: SESLHKTFGMRSSYHFLRFAQNF*HEEFLS
Trigger: TGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAA...TCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTCCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp TCTCCTTGGTATTGTCTGTATTTTAAGGCACTAAATGGATACTACCACTTGGTAGAGCCACGAAGAAGGTaGTTGCAAATAGACGTTTTT +
Preference number: 4 (lower is better)
Translates to: SPWYCLYFKALNGYYHLVEPRRR*LQIDVF
Trigger: AAAAACGTCTATTTGCAACCACCTTCTTCGTGGCTC...TACCAAGTGGTAGTATCCATTTAGTGCCTTAAAATACAGACAATACCAAGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp TTCCTATCACTTTCTGAGAAGAATACTTGGTTGTCTTTAGTCTGGATTGAGAACGAGCCACGAAGAAGGTaGTTGCAAATAGACGTTTTT +
Preference number: 4 (lower is better)
Translates to: FLSLSEKNTWLSLVWIENEPRRR*LQIDVF
Trigger: AAAAACGTCTATTTGCAACCACCTTCTTCGTGGCTC...GTTCTCAATCCAGACTAAAGACAACCAAGTATTCTTCTCAGAAAGTGATAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp TGGAAGAAAACAACTCAAACAGGTCTTGAATTGAGCCCTCCAAATTCATGTTTTGAGCCACGAAGAAGGTaGTTGCAAATAGACGTTTTT +
Preference number: 4 (lower is better)
Translates to: WKKTTQTGLELSPPNSCFEPRRR*LQIDVF
Trigger: AAAAACGTCTATTTGCAACCACCTTCTTCGTGGCTC...AAAACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTTGTTTTCTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp CTCTGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGATCTTCTCTGTCTCCTCAAGGGTAGGCTGTaGCAGATTTTTCATATTAAC +
Preference number: 4 (lower is better)
Translates to: LCGFLCLRKNLFCDLLCLLKGRL*QIFHIN
Trigger: GTTAATATGAAAAATCTGCCACAGCCTACCCTTGAG...GAGACAGAGAAGATCACAGAATAAATTTTTACGGAGACAAAGGAAACCACAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
CDS-3UTR CCA 90 bp TCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCCCACCACTGGCTGATTaGAAGAAAACAACTCAAACA +
Preference number: 4 (lower is better)
Translates to: SSLKTLLFFTGCPRSTLFPPLAD*KKTTQT
Trigger: TGTTTGAGTTGTTTTCTTCCAATCAGCCAGTGGTGG...GAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469169.5
CDS-3UTR TCA 90 bp TTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGAAACAGGTCTTGAATTaGGCCCTCCAAATTCATGTT +
Preference number: 4 (lower is better)
Translates to: FFEDSLILYWLSKIHIILKQVLN*ALQIHV
Trigger: AACATGAATTTGGAGGGCTCAATTCAAGACCTGTTT...CAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
CDS-3UTR TCA 90 bp CTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGATCTTCAAACAGGTCTTGAATTaGGCCCTCCAAATTCATGTT +
Preference number: 4 (lower is better)
Translates to: LLFFTGCPRSTLFCTLIFKQVLN*ALQIHV
Trigger: AACATGAATTTGGAGGGCTCAATTCAAGACCTGTTT...GAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000494164.5
ENST00000496206.5
CDS-3UTR TCA 90 bp CGACCTCTTGAAGCAATCCAAACAAAGGCTCATATAACAAAATCAACCTTTTTAAACTCAAACAGGTCTTaGATTGAGCCCTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: RPLEAIQTKAHITKSTFLNSNRS*IEPSKF
Trigger: GAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTT...TAAAAAGGTTGATTTTGTTATATGAGCCTTTGTTTGGATTGCTTCAAGAGGTCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
ENST00000496206.5
CDS-3UTR TCA 90 bp TTCCTATCACTTTCTGAGAAGAATACTTGGTTGTCTTTAGTCTGGATTGAGAACACAAAACTTTTGGCATaGGGAGTTCCTATCACTTTC +
Preference number: 4 (lower is better)
Translates to: FLSLSEKNTWLSLVWIENTKLLA*GVPITF
Trigger: GAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGT...GTTCTCAATCCAGACTAAAGACAACCAAGTATTCTTCTCAGAAAGTGATAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TCCCTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACCTTCTCTGTCTCAGATaGTGCTTTGAAGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: SLVIQAVANLVDQFQHINLLCLR*CFEVLI
Trigger: TATCAAAACTTCAAAGCATCATCTGAGACAGAGAAG...GTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR TCA 90 bp GAATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAAGACTTCTCTGTCTCAGATaGTGCTTTGAAGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: ESLHKTFGMRSSYHFLRRLLCLR*CFEVLI
Trigger: TATCAAAACTTCAAAGCATCATCTGAGACAGAGAAG...TCTTCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp ACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGATCTTGTATGACAGGCATTaGAACTCCACTATTCAAGAG +
Preference number: 4 (lower is better)
Translates to: TATFSVVSFVSVKIYSVILYDRH*NSTIQE
Trigger: CTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAA...GATCACAGAATAAATTTTTACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp ACAAAATCAACCTTTTTAAGACACCTTTATAGAGAACCCATAACCTGCTCACCATTGTATGACAGGCATTaGAACTCCACTATTCAAGAG +
Preference number: 4 (lower is better)
Translates to: TKSTFLRHLYREPITCSPLYDRH*NSTIQE
Trigger: CTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAA...TGGTGAGCAGGTTATGGGTTCTCTATAAAGGTGTCTTAAAAAGGTTGATTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR TCA 90 bp TCCCTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACAAATGTAGACTGAACTaGAATGAACTCCTGTGCAAT +
Preference number: 4 (lower is better)
Translates to: SLVIQAVANLVDQFQHINKCRLN*NELLCN
Trigger: ATTGCACAGGAGTTCATTTCAGTTCAGTCTACATTT...GTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR GCA 90 bp TCTCCTTGGTATTGTCTGTATTTTAAGGCACTAAATGGATACTACCACTTGGTACCATTCTGTTGTGATTaGTGTAAAGGACTGCACATA +
Preference number: 4 (lower is better)
Translates to: SPWYCLYFKALNGYYHLVPFCCD*CKGLHI
Trigger: TATGTGCAGTCCTTTACAGCAATCACAACAGAATGG...TACCAAGTGGTAGTATCCATTTAGTGCCTTAAAATACAGACAATACCAAGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp CTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACAAGCCATTCTGTTGTGATTaGTGTAAAGGACTGCACATA +
Preference number: 4 (lower is better)
Translates to: LVIQAVANLVDQFQHINKPFCCD*CKGLHI
Trigger: TATGTGCAGTCCTTTACAGCAATCACAACAGAATGG...CTTGTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp ATCTTTGAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACTGTTTTTATTTATTTaGATCACCGTCCACGAATCA +
Preference number: 4 (lower is better)
Translates to: IFEVRHWLNPSDLLKQSKLFLFI*ITVHES
Trigger: TGATTCGTGGACGGTGATGCAAATAAATAAAAACAG...TTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp TCTCCTTGGTATTGTCTGTATTTTAAGGCACTAAATGGATACTACCACTTGGTAAGGGAAAGGCAAGAATaGTGTTTACAACTTAGCCTA +
Preference number: 4 (lower is better)
Translates to: SPWYCLYFKALNGYYHLVRERQE*CLQLSL
Trigger: TAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCT...TACCAAGTGGTAGTATCCATTTAGTGCCTTAAAATACAGACAATACCAAGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp TCCCTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACGACAGTATGACGAGATaGCATTCTTTAATTACAGCT +
Preference number: 4 (lower is better)
Translates to: SLVIQAVANLVDQFQHINDSMTR*HSLITA
Trigger: AGCTGTAATTAAAGAATGCCATCTCGTCATACTGTC...GTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp TATAACTTGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCTTTTGACAGTATGACGAGATaGCATTCTTTAATTACAGCT +
Preference number: 4 (lower is better)
Translates to: YNLLKARIYSVCVCVCSFDSMTR*HSLITA
Trigger: AGCTGTAATTAAAGAATGCCATCTCGTCATACTGTC...AAAAGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp GACTCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTAGACAGTATGACGAGATaGCATTCTTTAATTACAGCT +
Preference number: 4 (lower is better)
Translates to: DSSLKTLLFFTGCPRSTLDSMTR*HSLITA
Trigger: AGCTGTAATTAAAGAATGCCATCTCGTCATACTGTC...TAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496206.5
CDS-3UTR CCA 90 bp TTCAGAAAGTTGTGTGAAGGACTCAGCCTCTCGGAATCTTTGCACAAAACTTTTTCTGAGAAGAATACTTaGTTGTCTTTAGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: FRKLCEGLSLSESLHKTFSEKNT*LSLVWI
Trigger: AATCCAGACTAAAGACAACCAAGTATTCTTCTCAGA...AAAAGTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCTTCACACAACTTTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp TATAACTTGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCTTTTTTTGCACAAAACTTTTaGCATGAGGAGTTCCTATCA +
Preference number: 4 (lower is better)
Translates to: YNLLKARIYSVCVCVCSFFAQNF*HEEFLS
Trigger: TGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAA...AAAAGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CCA 90 bp GAGGAGTTCCTATCACTTTCTGAGAAGAATACTTGGTTGTCTTTAGTCTGGATTTTTGCACAAAACTTTTaGCATGAGGAGTTCCTATCA +
Preference number: 4 (lower is better)
Translates to: EEFLSLSEKNTWLSLVWIFAQNF*HEEFLS
Trigger: TGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAA...AATCCAGACTAAAGACAACCAAGTATTCTTCTCAGAAAGTGATAGGAACTCCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp GAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTCTCAAGGGTAGGCTGTaGCAGATTTTTCATATTAAC +
Preference number: 4 (lower is better)
Translates to: EDSLILYWLSKIHIILYILKGRL*QIFHIN
Trigger: GTTAATATGAAAAATCTGCCACAGCCTACCCTTGAG...AATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CCA 90 bp CTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACAAGTTATATAACTGGATTTaGGGGCCACCTGGATCAAAA +
Preference number: 4 (lower is better)
Translates to: LVIQAVANLVDQFQHINKLYNWI*GPPGSK
Trigger: TTTTGATCCAGGTGGCCCCCAAATCCAGTTATATAA...CTTGTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
3UTR CAA 72 bp TTTGAAGTTTTGATACCTGAGCCACGAAGAAGGTGGTaGCAAATAGACGTTTTTATGCACTCTAGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: FEVLIPEPRRRW*QIDVFMHSSFF
Trigger: AAAGAAACTAGAGTGCATAAAAACGTCTATTTGCAACCACCTTCTTCGTGGCTCAGGTATCAAAACTTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp CTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGATCTTCATAAACAGGTCTTGAATTaGGCCCTCCAAATTCATGTT +
Preference number: 4 (lower is better)
Translates to: LILYWLSKIHIILYIDLHKQVLN*ALQIHV
Trigger: AACATGAATTTGGAGGGCTCAATTCAAGACCTGTTT...ATGAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000494164.5
ENST00000496206.5
CDS-3UTR TCA 90 bp CGACCTCTTGAAGCAATCCAAACAAAGGCTCATATAACAAAATCAACCTTTTTAAAACAGGTCTTGAATTaGGCCCTCCAAATTCATGTT +
Preference number: 4 (lower is better)
Translates to: RPLEAIQTKAHITKSTFLKQVLN*ALQIHV
Trigger: AACATGAATTTGGAGGGCTCAATTCAAGACCTGTTT...TAAAAAGGTTGATTTTGTTATATGAGCCTTTGTTTGGATTGCTTCAAGAGGTCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
ENST00000496206.5
CDS-3UTR TCA 90 bp CTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACAAGTTGGTAGTTAAGGGCTaGTTTTCATTGGAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: LVIQAVANLVDQFQHINKLVVKG*FSLEEN
Trigger: GTTTTCTTCCAATGAAAATCAGCCCTTAACTACCAA...CTTGTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314400.10
CDS-3UTR TCA 90 bp TTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACACTTCTCTGTCTCAGATaGTGCTTTGAAGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: LKTLLFFTGCPRSTLFCTLLCLR*CFEVLI
Trigger: TATCAAAACTTCAAAGCATCATCTGAGACAGAGAAG...TGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp AAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGCTTCTCTGTCTCAGATaGTGCTTTGAAGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: KTLLFFTGCPRSTLFCTLLLCLR*CFEVLI
Trigger: TATCAAAACTTCAAAGCATCATCTGAGACAGAGAAG...CAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp CTATCACTTTCTGAGAAGAATACTTGGTTGTCTTTAGTCTGGATTGAGAACATTTTGTATGACAGGCATTaGAACTCCACTATTCAAGAG +
Preference number: 4 (lower is better)
Translates to: LSLSEKNTWLSLVWIENILYDRH*NSTIQE
Trigger: CTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAA...AATGTTCTCAATCCAGACTAAAGACAACCAAGTATTCTTCTCAGAAAGTGATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TCTCCTTGGTATTGTCTGTATTTTAAGGCACTAAATGGATACTACCACTTGGTATTCTACTTAGAACACTaGACTAGCCTTGTTAATCAC +
Preference number: 4 (lower is better)
Translates to: SPWYCLYFKALNGYYHLVFYLEH*TSLVNH
Trigger: GTGATTAACAAGGCTAGTTCAGTGTTCTAAGTAGAA...TACCAAGTGGTAGTATCCATTTAGTGCCTTAAAATACAGACAATACCAAGGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR TCA 90 bp TGGTTGCAAATAGACGTTTTTATGCACTCTAGTTTCTTTGGCAAACTAGTACCTTTCTACTTAGAACACTaGACTAGCCTTGTTAATCAC +
Preference number: 4 (lower is better)
Translates to: WLQIDVFMHSSFFGKLVPFYLEH*TSLVNH
Trigger: GTGATTAACAAGGCTAGTTCAGTGTTCTAAGTAGAA...AGGTACTAGTTTGCCAAAGAAACTAGAGTGCATAAAAACGTCTATTTGCAACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TTCCTATCACTTTCTGAGAAGAATACTTGGTTGTCTTTAGTCTGGATTGAGAACAAATGTAGACTGAACTaGAATGAACTCCTGTGCAAT +
Preference number: 4 (lower is better)
Translates to: FLSLSEKNTWLSLVWIENKCRLN*NELLCN
Trigger: ATTGCACAGGAGTTCATTTCAGTTCAGTCTACATTT...GTTCTCAATCCAGACTAAAGACAACCAAGTATTCTTCTCAGAAAGTGATAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR TCA 90 bp TCTCCTTGGTATTGTCTGTATTTTAAGGCACTAAATGGATACTACCACTTGGTAGAAAATGAGAGGAGATaGAGATACTCCAAAAGAACA +
Preference number: 4 (lower is better)
Translates to: SPWYCLYFKALNGYYHLVENERR*RYSKRT
Trigger: TGTTCTTTTGGAGTATCTTCATCTCCTCTCATTTTC...TACCAAGTGGTAGTATCCATTTAGTGCCTTAAAATACAGACAATACCAAGGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp CTATCACTTTCTGAGAAGAATACTTGGTTGTCTTTAGTCTGGATTGAGAACATTTTCTTTAATTACAGCTaGAATGCAAAGGTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: LSLSEKNTWLSLVWIENIFFNYS*NAKVKG
Trigger: GCCCTTGACCTTTGCATTGCAGCTGTAATTAAAGAA...AATGTTCTCAATCCAGACTAAAGACAACCAAGTATTCTTCTCAGAAAGTGATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461381.5
CDS-3UTR GCA 90 bp CTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGATCTTCATTTCTTTAATTACAGCTaGAATGCAAAGGTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: LILYWLSKIHIILYIDLHFFNYS*NAKVKG
Trigger: GCCCTTGACCTTTGCATTGCAGCTGTAATTAAAGAA...ATGAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496206.5
CDS-3UTR GCA 90 bp CTCTGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGATCTTCTCTGTCTCCTGTTTTTATTTATTTaGATCACCGTCCACGAATCA +
Preference number: 4 (lower is better)
Translates to: LCGFLCLRKNLFCDLLCLLFLFI*ITVHES
Trigger: TGATTCGTGGACGGTGATGCAAATAAATAAAAACAG...GAGACAGAGAAGATCACAGAATAAATTTTTACGGAGACAAAGGAAACCACAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp TTCCTATCACTTTCTGAGAAGAATACTTGGTTGTCTTTAGTCTGGATTGAGAACGACAGTATGACGAGATaGCATTCTTTAATTACAGCT +
Preference number: 4 (lower is better)
Translates to: FLSLSEKNTWLSLVWIENDSMTR*HSLITA
Trigger: AGCTGTAATTAAAGAATGCCATCTCGTCATACTGTC...GTTCTCAATCCAGACTAAAGACAACCAAGTATTCTTCTCAGAAAGTGATAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461381.5
CDS-3UTR CCA 90 bp CTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACAAGTCTCTTATTCTTTACTaGCTGTCCAAGATCCACATT +
Preference number: 4 (lower is better)
Translates to: LVIQAVANLVDQFQHINKSLILY*LSKIHI
Trigger: AATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGA...CTTGTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000472637.5
CDS-3UTR CCA 90 bp AAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGTCTCTTATTCTTTACTaGCTGTCCAAGATCCACATT +
Preference number: 4 (lower is better)
Translates to: KTLLFFTGCPRSTLFCTLSLILY*LSKIHI
Trigger: AATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGA...CAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
CDS-3UTR GCA 90 bp TCTCCTTGGTATTGTCTGTATTTTAAGGCACTAAATGGATACTACCACTTGGTACTGTTTTTATTTATTTaGATCACCGTCCACGAATCA +
Preference number: 4 (lower is better)
Translates to: SPWYCLYFKALNGYYHLVLFLFI*ITVHES
Trigger: TGATTCGTGGACGGTGATGCAAATAAATAAAAACAG...TACCAAGTGGTAGTATCCATTTAGTGCCTTAAAATACAGACAATACCAAGGAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR GCA 90 bp CTCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTTTTTATTTATTTaGATCACCGTCCACGAATCA +
Preference number: 4 (lower is better)
Translates to: LFFEDSLILYWLSKIHIILFLFI*ITVHES
Trigger: TGATTCGTGGACGGTGATGCAAATAAATAAAAACAG...AATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CCA 90 bp ATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAAGAATTCTGAGAAGAATACTTaGTTGTCTTTAGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: IFAQNFWHEEFLSLSEKNSEKNT*LSLVWI
Trigger: AATCCAGACTAAAGACAACCAAGTATTCTTCTCAGA...ATTCTTCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR GCA 90 bp CGACCTCTTGAAGCAATCCAAACAAAGGCTCATATAACAAAATCAACCTTTTTACTGTTTTTATTTATTTaGATCACCGTCCACGAATCA +
Preference number: 4 (lower is better)
Translates to: RPLEAIQTKAHITKSTFLLFLFI*ITVHES
Trigger: TGATTCGTGGACGGTGATGCAAATAAATAAAAACAG...TAAAAAGGTTGATTTTGTTATATGAGCCTTTGTTTGGATTGCTTCAAGAGGTCG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS CCA 90 bp TTACGAAAGGCGGAGCTACGCGAGAGCACGTCCAGCGACCGGAGGTaGGGCGATGGGACCCAGTCCGGGCCGGAAGGGAGCAGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: LRKAELRESTSSDRR*GDGTQSGPEGSRGW
Trigger: CCACCCCCTGCTCCCTTCCGGCCCGGACTGGGTCCCATCGCCCCACCTCCGGTCGCTGGACGTGCTCTCGCGTAGCTCCGCCTTTCGTAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000460410.5
ENST00000473284.5
ENST00000494164.5
CDS CCA 90 bp GGGGCCAGGAGCCCGGCGGGAGGCTGCCTTCATCGAGTAAACGCGTaGGACTGGGAAGGACCCAGTCATCTGTATATTGGTTACCAACAC +
Preference number: 5 (lower is better)
Translates to: GARSPAGGCLHRVNA*DWEGPSHLYIGYQH
Trigger: GTGTTGGTAACCAATATACAGATGACTGGGTCCTTCCCAGTCCCACGCGTTTACTCGATGAAGGCAGCCTCCCGCCGGGCTCCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473284.5
ENST00000494164.5
CDS CCA 90 bp AGGAGCCCGGCGGGAGGCTGCCTTCATCGAGTAAACGCGTGGGACTaGGAAGGACCCAGTCATCTGTATATTGGTTACCAACACGTGGCC +
Preference number: 5 (lower is better)
Translates to: RSPAGGCLHRVNAWD*EGPSHLYIGYQHVA
Trigger: GGCCACGTGTTGGTAACCAATATACAGATGACTGGGTCCTTCCCAGTCCCACGCGTTTACTCGATGAAGGCAGCCTCCCGCCGGGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473284.5
CDS-3UTR CAA 90 bp GTTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCAGGGCCAAATGGGGTTaGTGGCGGCCCATTCTGTTG +
Preference number: 5 (lower is better)
Translates to: VLQQQSNKRSNNLQAPKTRAKWG*WRPILL
Trigger: CAACAGAATGGGCCGCCACAAACCCCATTTGGCCCT...GGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496340.1
CDS-3UTR CAA 90 bp GCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAAAGGGCCAAATGGGGTTaGTGGCGGCCCATTCTGTTG +
Preference number: 5 (lower is better)
Translates to: AISHPRSSFTSRHNGFCKRAKWG*WRPILL
Trigger: CAACAGAATGGGCCGCCACAAACCCCATTTGGCCCT...TTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CAA 90 bp CAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGCTGAAGCGGAGCAACAACTaGCAGGCTCCCAAAACCTTC +
Preference number: 5 (lower is better)
Translates to: QQLAGSQNLHQHQLHHWLKRSNN*QAPKTF
Trigger: GAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTT...CAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR CAA 90 bp TTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTAAGCGGAGCAACAACTaGCAGGCTCCCAAAACCTTC +
Preference number: 5 (lower is better)
Translates to: FCSSSPTSGATTCRLPKPKRSNN*QAPKTF
Trigger: GAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTT...AGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR CAA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATAGGGCCAAATGGGGTTaGTGGCGGCCCATTCTGTTG +
Preference number: 5 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYRAKWG*WRPILL
Trigger: CAACAGAATGGGCCGCCACAAACCCCATTTGGCCCT...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CAA 90 bp GGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGCATTGCTCAACCTGTTaGAGGGCCAAATGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: GATTCRLPKPSSTPTPPLHCSTC*RAKWGL
Trigger: CAAACCCCATTTGGCCCTCAAACAGGTTGAGCAATG...CAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496340.1
CDS-3UTR CAA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATAGGTGGGAGAATAGCTaGAGCCCAGGAGGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYRWENS*SPGGGG
Trigger: CCCTCCACCTCCTGGGCTCAAGCTATTCTCCCACCT...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CAA 90 bp TGGCCCCTGTTTATCAGTCTCTGGGAAAGGGCTAATCTGCATCTTTTAGCAACCAAGCGGAGCAACAACTaGCAGGCTCCCAAAACCTTC +
Preference number: 5 (lower is better)
Translates to: WPLFISLWERANLHLLATKRSNN*QAPKTF
Trigger: GAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTT...GGTTGCTAAAAGATGCAGATTAGCCCTTTCCCAGAGACTGATAAACAGGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314400.10
CDS-3UTR CAA 90 bp AGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCATTGTGTTTCAGCTGGTaGCAGAAAGCCCTCACATCA +
Preference number: 5 (lower is better)
Translates to: SGATTCRLPKPSSTPTPPLCFSW*QKALTS
Trigger: TGATGTGAGGGCTTTCTGCAACCAGCTGAAACACAA...TGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp GTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAAGGCTCCTTTCAGGTGTTTCCTaGCTATCTCCCACCCCCGCT +
Preference number: 5 (lower is better)
Translates to: VRHWLNPSDLLKQSKQRLLSGVS*LSPTPA
Trigger: AGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG...GAGCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472637.5
CDS-3UTR CAA 90 bp CTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACAATCCTAGCGACCTCTaGAAGCAATCCAAACAAAGG +
Preference number: 5 (lower is better)
Translates to: LSGVSLLSPTPAPHLPQDNPSDL*KQSKQR
Trigger: CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATT...GTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000472637.5
CDS-3UTR CAA 90 bp AGTTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACAATCCTAGCGACCTCTaGAAGCAATCCAAACAAAGG +
Preference number: 5 (lower is better)
Translates to: SFAAAVQQAEQQLAGSQNNPSDL*KQSKQR
Trigger: CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATT...GTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp AGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAGAAGTAAGGCATTGGTaGAATCCTAGCGACCTCTTG +
Preference number: 5 (lower is better)
Translates to: SPTSGATTCRLPKPSSTPEVRHW*NPSDLL
Trigger: CAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC...TGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp ACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCAGAAGTAAGGCATTGGTaGAATCCTAGCGACCTCTTG +
Preference number: 5 (lower is better)
Translates to: TSGATTCRLPKPSSTPTPEVRHW*NPSDLL
Trigger: CAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC...TGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp AGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACATTGTGTTTCAGCTGGTaGCAGAAAGCCCTCACATCA +
Preference number: 5 (lower is better)
Translates to: SSPTSGATTCRLPKPSSTLCFSW*QKALTS
Trigger: TGATGTGAGGGCTTTCTGCAACCAGCTGAAACACAA...TGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp ACTGAAGTCACCTCCTCAGGGAAAGGCAAGAATGCTGTTTACAACTTAGCCTATCTTTCAGGTGTTTCCTaGCTATCTCCCACCCCCGCT +
Preference number: 5 (lower is better)
Translates to: TEVTSSGKGKNAVYNLAYLSGVS*LSPTPA
Trigger: AGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG...ATAGGCTAAGTTGTAAACAGCATTCTTGCCTTTCCCTGAGGAGGTGACTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CAA 90 bp AGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGAAGTTTGTTACCAGGGCCAAATGGGGTTaGTGGCGGCCCATTCTGTTG +
Preference number: 5 (lower is better)
Translates to: STLSFQMFKPVAFKKFVTRAKWG*WRPILL
Trigger: CAACAGAATGGGCCGCCACAAACCCCATTTGGCCCT...GGTAACAAACTTCTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461381.5
CDS-3UTR CAA 90 bp GCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 5 (lower is better)
Translates to: AAVQQAEQQLAGSQNLHQQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...TTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR CAA 90 bp GAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAAGGAAGCGGAGCAACAACTaGCAGGCTCCCAAAACCTTC +
Preference number: 5 (lower is better)
Translates to: EVRHWLNPSDLLKQSKQRKRSNN*QAPKTF
Trigger: GAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTT...CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp CGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGTCAAAAGAAAAGTTTaGCAGCAGCAGTCCAACAAG +
Preference number: 5 (lower is better)
Translates to: RSNNLQAPKTFINTNSTTVKRKV*QQQSNK
Trigger: CTTGTTGGACTGCTGCTGCAAAACTTTTCTTTTGAC...AGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR CAA 90 bp TGGCCCCTGTTTATCAGTCTCTGGGAAAGGGCTAATCTGCATCTTTTAGCAACCGAAGTAAGGCATTGGTaGAATCCTAGCGACCTCTTG +
Preference number: 5 (lower is better)
Translates to: WPLFISLWERANLHLLATEVRHW*NPSDLL
Trigger: CAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC...GGTTGCTAAAAGATGCAGATTAGCCCTTTCCCAGAGACTGATAAACAGGGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CAA 90 bp TTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTGAAGTAAGGCATTGGTaGAATCCTAGCGACCTCTTG +
Preference number: 5 (lower is better)
Translates to: FPCYLPPPLLIYLKTQWFEVRHW*NPSDLL
Trigger: CAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC...AAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000472637.5
CDS-3UTR CAA 90 bp GCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAATTGTGTTTCAGCTGGTaGCAGAAAGCCCTCACATCA +
Preference number: 5 (lower is better)
Translates to: AISHPRSSFTSRHNGFCKLCFSW*QKALTS
Trigger: TGATGTGAGGGCTTTCTGCAACCAGCTGAAACACAA...TTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000472637.5
CDS-3UTR CAA 90 bp TTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGTGTTTCAGCTGGTaGCAGAAAGCCCTCACATCA +
Preference number: 5 (lower is better)
Translates to: FPCYLPPPLLIYLKTQWFLCFSW*QKALTS
Trigger: TGATGTGAGGGCTTTCTGCAACCAGCTGAAACACAA...AAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000472637.5
CDS-3UTR CAA 90 bp GAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGTGGCAAACTAGTACCTaGAGCTTCCAGATGTTTAAG +
Preference number: 5 (lower is better)
Translates to: EQQLAGSQNLHQHQLHHWWQTST*SFQMFK
Trigger: CTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCA...CCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp CCACTTAGCACTGGTATCTGTAGCACTCTTCCGAGTCCCTTGAGAGAACTGCTGCCACGAAGAAGGTGGTaGCAAATAGACGTTTTTATG +
Preference number: 5 (lower is better)
Translates to: PLSTGICSTLPSPLRELLPRRRW*QIDVFM
Trigger: CATAAAAACGTCTATTTGCAACCACCTTCTTCGTGG...CAGCAGTTCTCTCAAGGGACTCGGAAGAGTGCTACAGATACCAGTGCTAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp GAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCCTTTCAGGTGTTTCCTaGCTATCTCCCACCCCCGCT +
Preference number: 5 (lower is better)
Translates to: EFPLKESTATFSVVSFVSLSGVS*LSPTPA
Trigger: AGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG...GGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469809.5
ENST00000472637.5
CDS-3UTR CAA 90 bp TGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTCAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 5 (lower is better)
Translates to: CFLAISHPRSSFTSRHNGQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...ACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR CAA 90 bp AACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCCAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 5 (lower is better)
Translates to: NKRSNNLQAPKTFINTNSQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...GGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR CAA 90 bp AGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCACAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 5 (lower is better)
Translates to: SPTSGATTCRLPKPSSTPQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...TGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR CAA 90 bp CATAACCTGCTCACCAGCCCAACCATCACAAGGTTTAAAATAATGAACTCTTGCAAGCGGAGCAACAACTaGCAGGCTCCCAAAACCTTC +
Preference number: 5 (lower is better)
Translates to: HNLLTSPTITRFKIMNSCKRSNN*QAPKTF
Trigger: GAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTT...GCAAGAGTTCATTATTTTAAACCTTGTGATGGTTGGGCTGGTGAGCAGGTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp TGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTGTCAAAAGAAAAGTTTaGCAGCAGCAGTCCAACAAG +
Preference number: 5 (lower is better)
Translates to: CFLAISHPRSSFTSRHNGVKRKV*QQQSNK
Trigger: CTTGTTGGACTGCTGCTGCAAAACTTTTCTTTTGAC...ACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000472637.5
CDS-3UTR CAA 90 bp AAGTTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAAGTCAAAAGAAAAGTTTaGCAGCAGCAGTCCAACAAG +
Preference number: 5 (lower is better)
Translates to: KFCSSSPTSGATTCRLPKVKRKV*QQQSNK
Trigger: CTTGTTGGACTGCTGCTGCAAAACTTTTCTTTTGAC...TTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR CAA 90 bp GTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAAGTCAAAAGAAAAGTTTaGCAGCAGCAGTCCAACAAG +
Preference number: 5 (lower is better)
Translates to: VQQAEQQLAGSQNLHQHQVKRKV*QQQSNK
Trigger: CTTGTTGGACTGCTGCTGCAAAACTTTTCTTTTGAC...TTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000496340.1
CDS-3UTR CAA 90 bp TTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTAATCCTAGCGACCTCTaGAAGCAATCCAAACAAAGG +
Preference number: 5 (lower is better)
Translates to: FPCYLPPPLLIYLKTQWFNPSDL*KQSKQR
Trigger: CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATT...AAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000472637.5
CDS-3UTR CAA 90 bp TTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTTTTCTTCACTGGCTCTaGGTGACTGCTCATTTATTA +
Preference number: 5 (lower is better)
Translates to: FAAAVQQAEQQLAGSQNLFLHWL*VTAHLL
Trigger: TAATAAATGAGCAGTCACCAAGAGCCAGTGAAGAAA...AAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp CTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACGAGAAGAATACTTGGTaGTCTTTAGTCTGGATTGAG +
Preference number: 5 (lower is better)
Translates to: LSGVSLLSPTPAPHLPQDEKNTW*SLVWIE
Trigger: CTCAATCCAGACTAAAGACAACCAAGTATTCTTCTC...GTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR CAA 90 bp CAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACGAGAAGAATACTTGGTaGTCTTTAGTCTGGATTGAG +
Preference number: 5 (lower is better)
Translates to: QAEQQLAGSQNLHQHQLHEKNTW*SLVWIE
Trigger: CTCAATCCAGACTAAAGACAACCAAGTATTCTTCTC...GTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp CAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACGAGAAGAATACTTGGTaGTCTTTAGTCTGGATTGAG +
Preference number: 5 (lower is better)
Translates to: QQSNKRSNNLQAPKTFINEKNTW*SLVWIE
Trigger: CTCAATCCAGACTAAAGACAACCAAGTATTCTTCTC...GTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp CAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCCACGAAGAAGGTGGTaGCAAATAGACGTTTTTATG +
Preference number: 5 (lower is better)
Translates to: QQAEQQLAGSQNLHQHQLPRRRW*QIDVFM
Trigger: CATAAAAACGTCTATTTGCAACCACCTTCTTCGTGG...GAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp CTTTCAGGTGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACAAGCAGTGGCAAACCTaGTTGATCAATTCCAACATA +
Preference number: 5 (lower is better)
Translates to: LSGVSLLSPTPAPHLPQDKQWQT*LINSNI
Trigger: TATGTTGGAATTGATCAACAAGGTTTGCCACTGCTT...GTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS TCA 90 bp GAATTTCTAGCTATCAATGCTCTTAGGATAATACGTGCTGAACAGTaGCAGGCAGTCTCTGGCAATGGCTGCATCAGGCAATTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: EFLAINALRIIRAEQ*QAVSGNGCIRQFLR
Trigger: TCTCAGGAATTGCCTGATGCAGCCATTGCCAGAGACTGCCTGTCACTGTTCAGCACGTATTATCCTAAGAGCATTGATAGCTAGAAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486271.5
CDS-3UTR CAA 90 bp CTCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTAGGGCCAAATGGGGTTaGTGGCGGCCCATTCTGTTG +
Preference number: 5 (lower is better)
Translates to: LFFEDSLILYWLSKIHIIRAKWG*WRPILL
Trigger: CAACAGAATGGGCCGCCACAAACCCCATTTGGCCCT...AATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496206.5
CDS-3UTR CAA 90 bp TTTGAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAAAGCGGAGCAACAACTaGCAGGCTCCCAAAACCTTC +
Preference number: 5 (lower is better)
Translates to: FEVRHWLNPSDLLKQSKQKRSNN*QAPKTF
Trigger: GAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTT...TTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp TTCAGAAAGTTGTGTGAAGGACTCAGCCTCTCGGAATCTTTGCACAAAACTTTTAAGCGGAGCAACAACTaGCAGGCTCCCAAAACCTTC +
Preference number: 5 (lower is better)
Translates to: FRKLCEGLSLSESLHKTFKRSNN*QAPKTF
Trigger: GAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTT...AAAAGTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCTTCACACAACTTTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp GTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAAGGCTCAATCCTAGCGACCTCTaGAAGCAATCCAAACAAAGG +
Preference number: 5 (lower is better)
Translates to: VRHWLNPSDLLKQSKQRLNPSDL*KQSKQR
Trigger: CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATT...GAGCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
ENST00000496206.5
CDS-3UTR CAA 90 bp TTGCTCCTGCACCATACAACTGCCATCTGGATTTCTTCAGAAAGTTGTGTGAAGTTGTGTTTCAGCTGGTaGCAGAAAGCCCTCACATCA +
Preference number: 5 (lower is better)
Translates to: LLLHHTTAIWISSESCVKLCFSW*QKALTS
Trigger: TGATGTGAGGGCTTTCTGCAACCAGCTGAAACACAA...CTTCACACAACTTTCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp GCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAATGGCAAACTAGTACCTaGAGCTTCCAGATGTTTAAG +
Preference number: 5 (lower is better)
Translates to: AISHPRSSFTSRHNGFCKWQTST*SFQMFK
Trigger: CTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCA...TTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR CAA 90 bp CAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACTCCACCACTGGCTGACTACTGTTTTTATTTATTaGCATCACCGTCCACGAATC +
Preference number: 5 (lower is better)
Translates to: QLAGSQNLHQHQLHHWLTTVFIY*HHRPRI
Trigger: GATTCGTGGACGGTGATGCAAATAAATAAAAACAGT...AGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462295.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp AGTTTTGCAGCAGCAGTCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACACTGTTTTTATTTATTaGCATCACCGTCCACGAATC +
Preference number: 5 (lower is better)
Translates to: SFAAAVQQAEQQLAGSQNTVFIY*HHRPRI
Trigger: GATTCGTGGACGGTGATGCAAATAAATAAAAACAGT...GTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp TATAACTTGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCTTTTCTTTCAGGTGTTTCCTaGCTATCTCCCACCCCCGCT +
Preference number: 5 (lower is better)
Translates to: YNLLKARIYSVCVCVCSFLSGVS*LSPTPA
Trigger: AGCGGGGGTGGGAGATAGCAAGGAAACACCTGAAAG...AAAAGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CAA 90 bp TTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTGCCAATAAGACCAAATaGACCTTTCAGGTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: FPCYLPPPLLIYLKTQWFANKTK*TFQVFP
Trigger: AGGAAACACCTGAAAGGTCAATTTGGTCTTATTGGC...AAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR CAA 90 bp TCCAACAAGCGGAGCAACAACTTGCAGGCTCCCAAAACCTTCATCAACACCAACAAGCAGTGGCAAACCTaGTTGATCAATTCCAACATA +
Preference number: 5 (lower is better)
Translates to: SNKRSNNLQAPKTFINTNKQWQT*LINSNI
Trigger: TATGTTGGAATTGATCAACAAGGTTTGCCACTGCTT...GTTGGTGTTGATGAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472637.5
CDS-3UTR CAA 90 bp TGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTAATGGATACTACCACTaGGTAGAAAGCCAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: CFLAISHPRSSFTSRHNGNGYYH*VESQKE
Trigger: TTCCTTTTGGCTTTCTACCAAGTGGTAGTATCCATT...ACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS TCA 90 bp GCACAGGCTGCAGAAGTTTCAAGGTTCACAAAGCACCATAGTTCTTaGGATACAGTTGAAAAACTGTTCTGGGGACTGAGTAGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: AQAAEVSRFTKHHSS*DTVEKLFWGLSSFV
Trigger: CACAAAGCTACTCAGTCCCCAGAACAGTTTTTCAACTGTATCTCAAGAACTATGGTGCTTTGTGAACCTTGAAACTTCTGCAGCCTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472762.5
CDS-3UTR CAA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATCAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 5 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR CAA 90 bp GTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAAGGCTCGTCAAAAGAAAAGTTTaGCAGCAGCAGTCCAACAAG +
Preference number: 5 (lower is better)
Translates to: VRHWLNPSDLLKQSKQRLVKRKV*QQQSNK
Trigger: CTTGTTGGACTGCTGCTGCAAAACTTTTCTTTTGAC...GAGCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp GAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAAGGAATCCTAGCGACCTCTaGAAGCAATCCAAACAAAGG +
Preference number: 5 (lower is better)
Translates to: EVRHWLNPSDLLKQSKQRNPSDL*KQSKQR
Trigger: CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATT...CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
ENST00000496206.5
CDS-3UTR CAA 90 bp CTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGTTGTGTTTCAGCTGGTaGCAGAAAGCCCTCACATCA +
Preference number: 5 (lower is better)
Translates to: LWQTSTLSFQMFKPVAFKLCFSW*QKALTS
Trigger: TGATGTGAGGGCTTTCTGCAACCAGCTGAAACACAA...CTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATTGGCAAACTAGTACCTaGAGCTTCCAGATGTTTAAG +
Preference number: 5 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYWQTST*SFQMFK
Trigger: CTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCA...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR CAA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATCCACGAAGAAGGTGGTaGCAAATAGACGTTTTTATG +
Preference number: 5 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYPRRRW*QIDVFM
Trigger: CATAAAAACGTCTATTTGCAACCACCTTCTTCGTGG...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR CAA 90 bp TGGCCCCTGTTTATCAGTCTCTGGGAAAGGGCTAATCTGCATCTTTTAGCAACCCTGGATCAAAATCACTaGGGCTCCATGTTAAAAATG +
Preference number: 5 (lower is better)
Translates to: WPLFISLWERANLHLLATLDQNH*GSMLKM
Trigger: CATTTTTAACATGGAGCCCAAGTGATTTTGATCCAG...GGTTGCTAAAAGATGCAGATTAGCCCTTTCCCAGAGACTGATAAACAGGGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CAA 90 bp TGTTTCCTTGCTATCTCCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTGGTAAAGGATATTCATaGAACACAAGGACACTTAGA +
Preference number: 5 (lower is better)
Translates to: CFLAISHPRSSFTSRHNGGKGYS*NTRTLR
Trigger: TCTAAGTGTCCTTGTGTTCAATGAATATCCTTTACC...ACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGGAGATAGCAAGGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CAA 90 bp TCCCTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACAAGGTTCAGCCCTGCTaGAAACTGGTTGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: SLVIQAVANLVDQFQHINKVQPC*KLVATA
Trigger: TGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACCTT...GTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CAA 90 bp TTGCTCCTGCACCATACAACTGCCATCTGGATTTCTTCAGAAAGTTGTGTGAAGCAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 5 (lower is better)
Translates to: LLLHHTTAIWISSESCVKQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...CTTCACACAACTTTCTGAAGAAATCCAGATGGCAGTTGTATGGTGCAGGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp GAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAAGGCAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 5 (lower is better)
Translates to: EVRHWLNPSDLLKQSKQRQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
ENST00000496206.5
CDS-3UTR CAA 90 bp ATGGTTCCTGATGTACTGTTTTTATTTATTTGCATCACCGTCCACGAATCAGTTAAGCGGAGCAACAACTaGCAGGCTCCCAAAACCTTC +
Preference number: 5 (lower is better)
Translates to: MVPDVLFLFICITVHESVKRSNN*QAPKTF
Trigger: GAAGGTTTTGGGAGCCTGCAAGTTGTTGCTCCGCTT...AACTGATTCGTGGACGGTGATGCAAATAAATAAAAACAGTACATCAGGAACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp ATCTTTGAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAAGAAGTAAGGCATTGGTaGAATCCTAGCGACCTCTTG +
Preference number: 5 (lower is better)
Translates to: IFEVRHWLNPSDLLKQSKEVRHW*NPSDLL
Trigger: CAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC...TTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
ENST00000496206.5
CDS-3UTR CAA 90 bp TTTGAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAGAAGTAAGGCATTGGTaGAATCCTAGCGACCTCTTG +
Preference number: 5 (lower is better)
Translates to: FEVRHWLNPSDLLKQSKQEVRHW*NPSDLL
Trigger: CAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC...TTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
ENST00000496206.5
CDS-3UTR CAA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATCTGGATCAAAATCACTaGGGCTCCATGTTAAAAATG +
Preference number: 5 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYLDQNH*GSMLKM
Trigger: CATTTTTAACATGGAGCCCAAGTGATTTTGATCCAG...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CAA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATAATGGATACTACCACTaGGTAGAAAGCCAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYNGYYH*VESQKE
Trigger: TTCCTTTTGGCTTTCTACCAAGTGGTAGTATCCATT...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CAA 90 bp CTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACAAGAAGGTTCAGCCCTGCTaGAAACTGGTTGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: LVIQAVANLVDQFQHINKKVQPC*KLVATA
Trigger: TGCTGTGGCAACCAGTTTCAAGCAGGGCTGAACCTT...CTTGTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS CCA 90 bp GTTTCTGCATCTAAGGTTTGGCTCTTCAGCGACAGTATGACGAGATaGCATTCTTTAATTACAGCTGCAATGCAAAGGTTCCATTTCACA +
Preference number: 5 (lower is better)
Translates to: VSASKVWLFSDSMTR*HSLITAAMQRFHFT
Trigger: TGTGAAATGGAACCTTTGCATTGCAGCTGTAATTAAAGAATGCCATCTCGTCATACTGTCGCTGAAGAGCCAAACCTTAGATGCAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472166.1
CDS-3UTR CAA 90 bp CTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACAAGCATTGCTCAACCTGTTaGAGGGCCAAATGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: LVIQAVANLVDQFQHINKHCSTC*RAKWGL
Trigger: CAAACCCCATTTGGCCCTCAAACAGGTTGAGCAATG...CTTGTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CAA 90 bp TGGTTGCAAATAGACGTTTTTATGCACTCTAGTTTCTTTGGCAAACTAGTACCTCATTGCTCAACCTGTTaGAGGGCCAAATGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: WLQIDVFMHSSFFGKLVPHCSTC*RAKWGL
Trigger: CAAACCCCATTTGGCCCTCAAACAGGTTGAGCAATG...AGGTACTAGTTTGCCAAAGAAACTAGAGTGCATAAAAACGTCTATTTGCAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461381.5
CDS-3UTR CAA 90 bp CTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGATCTTCCATTGCTCAACCTGTTaGAGGGCCAAATGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: LLFFTGCPRSTLFCTLIFHCSTC*RAKWGL
Trigger: CAAACCCCATTTGGCCCTCAAACAGGTTGAGCAATG...GAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496206.5
CDS-3UTR CAA 90 bp TTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTACAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 5 (lower is better)
Translates to: FPLKESTATFSVVSFVSVQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...TACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp CTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGGTCAAAAGAAAAGTTTaGCAGCAGCAGTCCAACAAG +
Preference number: 5 (lower is better)
Translates to: LWQTSTLSFQMFKPVAFKVKRKV*QQQSNK
Trigger: CTTGTTGGACTGCTGCTGCAAAACTTTTCTTTTGAC...CTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp TTTCTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAATCCTAGCGACCTCTaGAAGCAATCCAAACAAAGG +
Preference number: 5 (lower is better)
Translates to: FLWQTSTLSFQMFKPVAFNPSDL*KQSKQR
Trigger: CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATT...AAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461381.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp TCTGATGACTCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCAATCCTAGCGACCTCTaGAAGCAATCCAAACAAAGG +
Preference number: 5 (lower is better)
Translates to: SDDSSLKTLLFFTGCPRSNPSDL*KQSKQR
Trigger: CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATT...GGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGAGTCATCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
CDS-3UTR CAA 90 bp GAATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAAGAGAAGTAAGGCATTGGTaGAATCCTAGCGACCTCTTG +
Preference number: 5 (lower is better)
Translates to: ESLHKTFGMRSSYHFLRREVRHW*NPSDLL
Trigger: CAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC...TCTTCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461381.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp GAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCAAACAAAGGTTTCTTCACTGGCTCTaGGTGACTGCTCATTTATTA +
Preference number: 5 (lower is better)
Translates to: EVRHWLNPSDLLKQSKQRFLHWL*VTAHLL
Trigger: TAATAAATGAGCAGTCACCAAGAGCCAGTGAAGAAA...CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
ENST00000496206.5
CDS-3UTR CAA 90 bp GAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCTGGCAAACTAGTACCTaGAGCTTCCAGATGTTTAAG +
Preference number: 5 (lower is better)
Translates to: EFPLKESTATFSVVSFVSWQTST*SFQMFK
Trigger: CTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCA...GGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp CTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTAAGCCACGAAGAAGGTGGTaGCAAATAGACGTTTTTATG +
Preference number: 5 (lower is better)
Translates to: LWQTSTLSFQMFKPVAFKPRRRW*QIDVFM
Trigger: CATAAAAACGTCTATTTGCAACCACCTTCTTCGTGG...CTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp AGAACTGCTGAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCCCACGAAGAAGGTGGTaGCAAATAGACGTTTTTATG +
Preference number: 5 (lower is better)
Translates to: RTAEFPLKESTATFSVVSPRRRW*QIDVFM
Trigger: CATAAAAACGTCTATTTGCAACCACCTTCTTCGTGG...GGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTCAGCAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp TTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTACCACGAAGAAGGTGGTaGCAAATAGACGTTTTTATG +
Preference number: 5 (lower is better)
Translates to: FPLKESTATFSVVSFVSVPRRRW*QIDVFM
Trigger: CATAAAAACGTCTATTTGCAACCACCTTCTTCGTGG...TACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp CCCACCCCCGCTCCTCATTTACCTCAAGACACAATGGTTTTTGCAAACGATTATGGTAAAGGATATTCATaGAACACAAGGACACTTAGA +
Preference number: 5 (lower is better)
Translates to: PTPAPHLPQDTMVFANDYGKGYS*NTRTLR
Trigger: TCTAAGTGTCCTTGTGTTCAATGAATATCCTTTACC...ATAATCGTTTGCAAAAACCATTGTGTCTTGAGGTAAATGAGGAGCGGGGGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CAA 90 bp TTTCTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTCAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 5 (lower is better)
Translates to: FLWQTSTLSFQMFKPVAFQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...AAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp TCGGAATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAGTCAAAAGAAAAGTTTaGCAGCAGCAGTCCAACAAG +
Preference number: 5 (lower is better)
Translates to: SESLHKTFGMRSSYHFLRVKRKV*QQQSNK
Trigger: CTTGTTGGACTGCTGCTGCAAAACTTTTCTTTTGAC...TCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTCCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp CTCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTGAAGTAAGGCATTGGTaGAATCCTAGCGACCTCTTG +
Preference number: 5 (lower is better)
Translates to: LFFEDSLILYWLSKIHIIEVRHW*NPSDLL
Trigger: CAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC...AATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
CDS-3UTR CAA 90 bp TCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTGAAGTAAGGCATTGGTaGAATCCTAGCGACCTCTTG +
Preference number: 5 (lower is better)
Translates to: SLKTLLFFTGCPRSTLFCEVRHW*NPSDLL
Trigger: CAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC...ACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
CDS-3UTR CAA 90 bp TCTCCTTGGTATTGTCTGTATTTTAAGGCACTAAATGGATACTACCACTTGGTATTGTGTTTCAGCTGGTaGCAGAAAGCCCTCACATCA +
Preference number: 5 (lower is better)
Translates to: SPWYCLYFKALNGYYHLVLCFSW*QKALTS
Trigger: TGATGTGAGGGCTTTCTGCAACCAGCTGAAACACAA...TACCAAGTGGTAGTATCCATTTAGTGCCTTAAAATACAGACAATACCAAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CAA 90 bp GCTGAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCGAGAAGAATACTTGGTaGTCTTTAGTCTGGATTGAG +
Preference number: 5 (lower is better)
Translates to: AEFPLKESTATFSVVSFVEKNTW*SLVWIE
Trigger: CTCAATCCAGACTAAAGACAACCAAGTATTCTTCTC...GACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp TTTCTTTGGCAAACTAGTACCTTGAGCTTCCAGATGTTTAAGCCGGTTGCTTTTTGGCAAACTAGTACCTaGAGCTTCCAGATGTTTAAG +
Preference number: 5 (lower is better)
Translates to: FLWQTSTLSFQMFKPVAFWQTST*SFQMFK
Trigger: CTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCA...AAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp TTCAGAAAGTTGTGTGAAGGACTCAGCCTCTCGGAATCTTTGCACAAAACTTTTCCACGAAGAAGGTGGTaGCAAATAGACGTTTTTATG +
Preference number: 5 (lower is better)
Translates to: FRKLCEGLSLSESLHKTFPRRRW*QIDVFM
Trigger: CATAAAAACGTCTATTTGCAACCACCTTCTTCGTGG...AAAAGTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCTTCACACAACTTTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp AGATCAGTTCTATGCACAGTACAGTGTGAGAGTCTCCACTTAGCACTGGTATCTACTGTTTTTATTTATTaGCATCACCGTCCACGAATC +
Preference number: 5 (lower is better)
Translates to: RSVLCTVQCESLHLALVSTVFIY*HHRPRI
Trigger: GATTCGTGGACGGTGATGCAAATAAATAAAAACAGT...AGATACCAGTGCTAAGTGGAGACTCTCACACTGTACTGTGCATAGAACTGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp GAATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAAGACAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 5 (lower is better)
Translates to: ESLHKTFGMRSSYHFLRRQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...TCTTCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp CTCTGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGATCTTCTCTGTCTCGTCAAAAGAAAAGTTTaGCAGCAGCAGTCCAACAAG +
Preference number: 5 (lower is better)
Translates to: LCGFLCLRKNLFCDLLCLVKRKV*QQQSNK
Trigger: CTTGTTGGACTGCTGCTGCAAAACTTTTCTTTTGAC...GAGACAGAGAAGATCACAGAATAAATTTTTACGGAGACAAAGGAAACCACAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp ACAAAATCAACCTTTTTAAGACACCTTTATAGAGAACCCATAACCTGCTCACCAAATCCTAGCGACCTCTaGAAGCAATCCAAACAAAGG +
Preference number: 5 (lower is better)
Translates to: TKSTFLRHLYREPITCSPNPSDL*KQSKQR
Trigger: CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATT...TGGTGAGCAGGTTATGGGTTCTCTATAAAGGTGTCTTAAAAAGGTTGATTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp GAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTAATCCTAGCGACCTCTaGAAGCAATCCAAACAAAGG +
Preference number: 5 (lower is better)
Translates to: EDSLILYWLSKIHIILYINPSDL*KQSKQR
Trigger: CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATT...AATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
CDS-3UTR CAA 90 bp TCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCAATCCTAGCGACCTCTaGAAGCAATCCAAACAAAGG +
Preference number: 5 (lower is better)
Translates to: SSLKTLLFFTGCPRSTLFNPSDL*KQSKQR
Trigger: CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATT...GAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
CDS-3UTR CAA 90 bp TGGAAGAAAACAACTCAAACAGGTCTTGAATTGAGCCCTCCAAATTCATGTTTTAATCCTAGCGACCTCTaGAAGCAATCCAAACAAAGG +
Preference number: 5 (lower is better)
Translates to: WKKTTQTGLELSPPNSCFNPSDL*KQSKQR
Trigger: CCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGGATT...AAAACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTTGTTTTCTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
CDS-3UTR CAA 90 bp CGACCTCTTGAAGCAATCCAAACAAAGGCTCATATAACAAAATCAACCTTTTTAGAAGTAAGGCATTGGTaGAATCCTAGCGACCTCTTG +
Preference number: 5 (lower is better)
Translates to: RPLEAIQTKAHITKSTFLEVRHW*NPSDLL
Trigger: CAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTC...TAAAAAGGTTGATTTTGTTATATGAGCCTTTGTTTGGATTGCTTCAAGAGGTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
ENST00000496206.5
CDS-3UTR CAA 90 bp TCTGATGACTCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCTTTCTTCACTGGCTCTaGGTGACTGCTCATTTATTA +
Preference number: 5 (lower is better)
Translates to: SDDSSLKTLLFFTGCPRSFLHWL*VTAHLL
Trigger: TAATAAATGAGCAGTCACCAAGAGCCAGTGAAGAAA...GGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGAGTCATCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
CDS-3UTR CAA 90 bp AAAATCTTTGAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCTTTCTTCACTGGCTCTaGGTGACTGCTCATTTATTA +
Preference number: 5 (lower is better)
Translates to: KIFEVRHWLNPSDLLKQSFLHWL*VTAHLL
Trigger: TAATAAATGAGCAGTCACCAAGAGCCAGTGAAGAAA...GGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAAGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
ENST00000496206.5
CDS-3UTR CAA 90 bp TTAGTATTCAGAGGCGGACCTATGTATAATGGAGCCAATAAGACCAAATTGACCGAGAAGAATACTTGGTaGTCTTTAGTCTGGATTGAG +
Preference number: 5 (lower is better)
Translates to: LVFRGGPMYNGANKTKLTEKNTW*SLVWIE
Trigger: CTCAATCCAGACTAAAGACAACCAAGTATTCTTCTC...GGTCAATTTGGTCTTATTGGCTCCATTATACATAGGTCCGCCTCTGAATACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR CAA 90 bp GCTGAATTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCACTGTTTTTATTTATTaGCATCACCGTCCACGAATC +
Preference number: 5 (lower is better)
Translates to: AEFPLKESTATFSVVSFVTVFIY*HHRPRI
Trigger: GATTCGTGGACGGTGATGCAAATAAATAAAAACAGT...GACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAATTCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp GTTTGTATGACAGGCATTGAAACTCCACTATTCAAGAGCTGCTTACTGTTAGGGACTGTTTTTATTTATTaGCATCACCGTCCACGAATC +
Preference number: 5 (lower is better)
Translates to: VCMTGIETPLFKSCLLLGTVFIY*HHRPRI
Trigger: GATTCGTGGACGGTGATGCAAATAAATAAAAACAGT...CCCTAACAGTAAGCAGCTCTTGAATAGTGGAGTTTCAATGCCTGTCATACAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp TCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGGCCAATAAGACCAAATaGACCTTTCAGGTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: STATFSVVSFVSVKIYSVANKTK*TFQVFP
Trigger: AGGAAACACCTGAAAGGTCAATTTGGTCTTATTGGC...CACAGAATAAATTTTTACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469809.5
ENST00000472637.5
CDS-3UTR CAA 90 bp TCGGAATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAAAGCAGTGGCAAACCTaGTTGATCAATTCCAACATA +
Preference number: 5 (lower is better)
Translates to: SESLHKTFGMRSSYHFLRKQWQT*LINSNI
Trigger: TATGTTGGAATTGATCAACAAGGTTTGCCACTGCTT...TCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469809.5
ENST00000472637.5
CDS-3UTR CAA 90 bp TTTCCCTTAAAAGAGTCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAAAACTGGTCTCTTACTaGGAAGAAAACAACTCAAAC +
Preference number: 5 (lower is better)
Translates to: FPLKESTATFSVVSFVSVKLVSY*EENNSN
Trigger: GTTTGAGTTGTTTTCTTCCAAGTAAGAGACCAGTTT...TACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469809.5
CDS-3UTR CAA 90 bp TCTTCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCCAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 5 (lower is better)
Translates to: SSLKTLLFFTGCPRSTLFQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...GAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
CDS-3UTR CAA 90 bp TGGAAGAAAACAACTCAAACAGGTCTTGAATTGAGCCCTCCAAATTCATGTTTTCAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 5 (lower is better)
Translates to: WKKTTQTGLELSPPNSCFQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...AAAACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTTGTTTTCTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
CDS-3UTR CAA 90 bp TCTTTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTCAAACAGGTCTTGAATaGAGCCCTCCAAATTCATGT +
Preference number: 5 (lower is better)
Translates to: SLKTLLFFTGCPRSTLFCQTGLE*SPPNSC
Trigger: ACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTG...ACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
CDS-3UTR CAA 90 bp TCCCTGGTAATACAAGCAGTGGCAAACCTTGTTGATCAATTCCAACATATAAACTTTCTTCACTGGCTCTaGGTGACTGCTCATTTATTA +
Preference number: 5 (lower is better)
Translates to: SLVIQAVANLVDQFQHINFLHWL*VTAHLL
Trigger: TAATAAATGAGCAGTCACCAAGAGCCAGTGAAGAAA...GTTTATATGTTGGAATTGATCAACAAGGTTTGCCACTGCTTGTATTACCAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000472637.5
CDS-3UTR CAA 90 bp GAATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAAGATTTCTTCACTGGCTCTaGGTGACTGCTCATTTATTA +
Preference number: 5 (lower is better)
Translates to: ESLHKTFGMRSSYHFLRRFLHWL*VTAHLL
Trigger: TAATAAATGAGCAGTCACCAAGAGCCAGTGAAGAAA...TCTTCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461381.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp TCGACTGCAACTTTCTCTGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGGAGAAGAATACTTGGTaGTCTTTAGTCTGGATTGAG +
Preference number: 5 (lower is better)
Translates to: STATFSVVSFVSVKIYSVEKNTW*SLVWIE
Trigger: CTCAATCCAGACTAAAGACAACCAAGTATTCTTCTC...CACAGAATAAATTTTTACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp AAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGTGGCAAACTAGTACCTaGAGCTTCCAGATGTTTAAG +
Preference number: 5 (lower is better)
Translates to: KTLLFFTGCPRSTLFCTLWQTST*SFQMFK
Trigger: CTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCA...CAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp ACAAAATCAACCTTTTTAAGACACCTTTATAGAGAACCCATAACCTGCTCACCATGGCAAACTAGTACCTaGAGCTTCCAGATGTTTAAG +
Preference number: 5 (lower is better)
Translates to: TKSTFLRHLYREPITCSPWQTST*SFQMFK
Trigger: CTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCA...TGGTGAGCAGGTTATGGGTTCTCTATAAAGGTGTCTTAAAAAGGTTGATTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
CDS-3UTR CAA 90 bp GAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTTGGCAAACTAGTACCTaGAGCTTCCAGATGTTTAAG +
Preference number: 5 (lower is better)
Translates to: EDSLILYWLSKIHIILYIWQTST*SFQMFK
Trigger: CTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCA...AATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp TTAGTATTCAGAGGCGGACCTATGTATAATGGAGCCAATAAGACCAAATTGACCACTGTTTTTATTTATTaGCATCACCGTCCACGAATC +
Preference number: 5 (lower is better)
Translates to: LVFRGGPMYNGANKTKLTTVFIY*HHRPRI
Trigger: GATTCGTGGACGGTGATGCAAATAAATAAAAACAGT...GGTCAATTTGGTCTTATTGGCTCCATTATACATAGGTCCGCCTCTGAATACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000469809.5
ENST00000472637.5
CDS-3UTR CAA 90 bp AAAATCTTTGAAGTAAGGCATTGGTTGAATCCTAGCGACCTCTTGAAGCAATCCACTGTTTTTATTTATTaGCATCACCGTCCACGAATC +
Preference number: 5 (lower is better)
Translates to: KIFEVRHWLNPSDLLKQSTVFIY*HHRPRI
Trigger: GATTCGTGGACGGTGATGCAAATAAATAAAAACAGT...GGATTGCTTCAAGAGGTCGCTAGGATTCAACCAATGCCTTACTTCAAAGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp TGTGGTTTCCTTTGTCTCCGTAAAAATTTATTCTGTGATCTTCTCTGTCTCAGAGCCAATAAGACCAAATaGACCTTTCAGGTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: CGFLCLRKNLFCDLLCLRANKTK*TFQVFP
Trigger: AGGAAACACCTGAAAGGTCAATTTGGTCTTATTGGC...TCTGAGACAGAGAAGATCACAGAATAAATTTTTACGGAGACAAAGGAAACCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469809.5
ENST00000472637.5
CDS-3UTR CAA 90 bp TATAACTTGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCTTTTAAGCAGTGGCAAACCTaGTTGATCAATTCCAACATA +
Preference number: 5 (lower is better)
Translates to: YNLLKARIYSVCVCVCSFKQWQT*LINSNI
Trigger: TATGTTGGAATTGATCAACAAGGTTTGCCACTGCTT...AAAAGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CAA 90 bp ATCTTTGCACAAAACTTTTGGCATGAGGAGTTCCTATCACTTTCTGAGAAGAATTTTCTTCACTGGCTCTaGGTGACTGCTCATTTATTA +
Preference number: 5 (lower is better)
Translates to: IFAQNFWHEEFLSLSEKNFLHWL*VTAHLL
Trigger: TAATAAATGAGCAGTCACCAAGAGCCAGTGAAGAAA...ATTCTTCTCAGAAAGTGATAGGAACTCCTCATGCCAAAAGTTTTGTGCAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000461381.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp TTGAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTTCTTCACTGGCTCTaGGTGACTGCTCATTTATTA +
Preference number: 5 (lower is better)
Translates to: LKTLLFFTGCPRSTLFCTFLHWL*VTAHLL
Trigger: TAATAAATGAGCAGTCACCAAGAGCCAGTGAAGAAA...TGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000496206.5
CDS-3UTR CAA 90 bp GAAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGAGAAGAATACTTGGTaGTCTTTAGTCTGGATTGAG +
Preference number: 5 (lower is better)
Translates to: EDSLILYWLSKIHIILYIEKNTW*SLVWIE
Trigger: CTCAATCCAGACTAAAGACAACCAAGTATTCTTCTC...AATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp CTATCACTTTCTGAGAAGAATACTTGGTTGTCTTTAGTCTGGATTGAGAACATTTGGCAAACTAGTACCTaGAGCTTCCAGATGTTTAAG +
Preference number: 5 (lower is better)
Translates to: LSLSEKNTWLSLVWIENIWQTST*SFQMFK
Trigger: CTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCA...AATGTTCTCAATCCAGACTAAAGACAACCAAGTATTCTTCTCAGAAAGTGATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000461381.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000472637.5
ENST00000472705.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp CGACCTCTTGAAGCAATCCAAACAAAGGCTCATATAACAAAATCAACCTTTTTACCACGAAGAAGGTGGTaGCAAATAGACGTTTTTATG +
Preference number: 5 (lower is better)
Translates to: RPLEAIQTKAHITKSTFLPRRRW*QIDVFM
Trigger: CATAAAAACGTCTATTTGCAACCACCTTCTTCGTGG...TAAAAAGGTTGATTTTGTTATATGAGCCTTTGTTTGGATTGCTTCAAGAGGTCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp TATAACTTGCTTAAGGCCAGGATTTACAGTGTGTGTGTGTGTGTGTGTTCTTTTACTGTTTTTATTTATTaGCATCACCGTCCACGAATC +
Preference number: 5 (lower is better)
Translates to: YNLLKARIYSVCVCVCSFTVFIY*HHRPRI
Trigger: GATTCGTGGACGGTGATGCAAATAAATAAAAACAGT...AAAAGAACACACACACACACACACACTGTAAATCCTGGCCTTAAGCAAGTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CAA 90 bp TCTCCTTGGTATTGTCTGTATTTTAAGGCACTAAATGGATACTACCACTTGGTATGGCCATTTCTAGACTaGTCTAGAATGAAATCTCCT +
Preference number: 5 (lower is better)
Translates to: SPWYCLYFKALNGYYHLVWPFLD*SRMKSP
Trigger: AGGAGATTTCATTCTAGACAAGTCTAGAAATGGCCA...TACCAAGTGGTAGTATCCATTTAGTGCCTTAAAATACAGACAATACCAAGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314400.10
ENST00000383675.6
CDS-3UTR CAA 90 bp CGACCTCTTGAAGCAATCCAAACAAAGGCTCATATAACAAAATCAACCTTTTTATTTCTTCACTGGCTCTaGGTGACTGCTCATTTATTA +
Preference number: 5 (lower is better)
Translates to: RPLEAIQTKAHITKSTFLFLHWL*VTAHLL
Trigger: TAATAAATGAGCAGTCACCAAGAGCCAGTGAAGAAA...TAAAAAGGTTGATTTTGTTATATGAGCCTTTGTTTGGATTGCTTCAAGAGGTCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000460410.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
ENST00000496206.5
CDS-3UTR CAA 90 bp CTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGATCTTCATGAGAAGAATACTTGGTaGTCTTTAGTCTGGATTGAG +
Preference number: 5 (lower is better)
Translates to: LILYWLSKIHIILYIDLHEKNTW*SLVWIE
Trigger: CTCAATCCAGACTAAAGACAACCAAGTATTCTTCTC...ATGAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp AAGACTCTCTTATTCTTTACTGGCTGTCCAAGATCCACATTATTCTGTACATTGACTGTTTTTATTTATTaGCATCACCGTCCACGAATC +
Preference number: 5 (lower is better)
Translates to: KTLLFFTGCPRSTLFCTLTVFIY*HHRPRI
Trigger: GATTCGTGGACGGTGATGCAAATAAATAAAAACAGT...CAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000462295.5
ENST00000469169.5
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
CDS-3UTR CAA 90 bp TGGTTGCAAATAGACGTTTTTATGCACTCTAGTTTCTTTGGCAAACTAGTACCTCAAAACTGGTCTCCTTaGAAGACTCTCTTATTCTTT +
Preference number: 5 (lower is better)
Translates to: WLQIDVFMHSSFFGKLVPQNWSP*KTLLFF
Trigger: AAAGAATAAGAGAGTCTTCAAAGGAGACCAGTTTTG...AGGTACTAGTTTGCCAAAGAAACTAGAGTGCATAAAAACGTCTATTTGCAACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461381.5
CDS CCA 72 bp ACGCGAGAGCACGTCCAGCGACCGGAGGTGGGGCGATaGGACCCAGTCCGGGCCGGAAGGGAGCAGGGGGTG +
Preference number: 6 (lower is better)
Translates to: TREHVQRPEVGR*DPVRAGREQGV
Trigger: CACCCCCTGCTCCCTTCCGGCCCGGACTGGGTCCCATCGCCCCACCTCCGGTCGCTGGACGTGCTCTCGCGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000460410.5
ENST00000473284.5
ENST00000494164.5
CDS CCA 72 bp GCGGAGCTACGCGAGAGCACGTCCAGCGACCGGAGGTaGGGCGATGGGACCCAGTCCGGGCCGGAAGGGAGC +
Preference number: 6 (lower is better)
Translates to: AELRESTSSDRR*GDGTQSGPEGS
Trigger: GCTCCCTTCCGGCCCGGACTGGGTCCCATCGCCCCACCTCCGGTCGCTGGACGTGCTCTCGCGTAGCTCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460410.5
ENST00000473284.5
ENST00000494164.5
CDS GCA 72 bp TTAAACATTGCTCAACCAAGGGCCGCGCCGGGGTTCTaGACTGTCACTGCGCTGCGGTTCCCCGCCTTAGGG +
Preference number: 6 (lower is better)
Translates to: LNIAQPRAAPGF*TVTALRFPALG
Trigger: CCCTAAGGCGGGGAACCGCAGCGCAGTGACAGTGCAGAACCCCGGCGCGGCCCTTGGTTGAGCAATGTTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000460410.5
ENST00000462295.5
ENST00000469169.5
ENST00000469809.5
ENST00000470663.1
ENST00000472637.5
ENST00000473284.5
ENST00000489848.5
ENST00000491121.1
ENST00000494164.5
ENST00000494891.5
CDS CCA 72 bp AGCCCGGCGGGAGGCTGCCTTCATCGAGTAAACGCGTaGGACTGGGAAGGACCCAGTCATCTGTATATTGGT +
Preference number: 6 (lower is better)
Translates to: SPAGGCLHRVNA*DWEGPSHLYIG
Trigger: ACCAATATACAGATGACTGGGTCCTTCCCAGTCCCACGCGTTTACTCGATGAAGGCAGCCTCCCGCCGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473284.5
ENST00000494164.5
CDS GCA 72 bp CGACAGTATGACGAGATGGCATTCTTTAATTACAGCTaGAATGCAAAGGTCAAGGGCCGCGCCGGGGTTCTG +
Preference number: 6 (lower is better)
Translates to: RQYDEMAFFNYS*NAKVKGRAGVL
Trigger: CAGAACCCCGGCGCGGCCCTTGACCTTTGCATTGCAGCTGTAATTAAAGAATGCCATCTCGTCATACTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000461381.5
ENST00000486271.5
ENST00000494575.5
ENST00000496206.5
ENST00000496340.1
CDS GCA 72 bp CCAAATGGGGTTTGTGGCGGCCCATTCTGTTGTGATTaGTGTAAAGGACTGCACATAACACATCTGTTTCTG +
Preference number: 6 (lower is better)
Translates to: PNGVCGGPFCCD*CKGLHITHLFL
Trigger: CAGAAACAGATGTGTTATGTGCAGTCCTTTACAGCAATCACAACAGAATGGGCCGCCACAAACCCCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000461381.5
ENST00000472166.1
ENST00000486271.5
ENST00000494575.5
ENST00000496206.5
ENST00000496340.1
CDS CCA 72 bp ACTGCACATAACACATCTGTTTCTGCATCTAAGGTTTaGCTCTTCAGCGACAGTATGACGAGATGGCATTCT +
Preference number: 6 (lower is better)
Translates to: TAHNTSVSASKV*LFSDSMTRWHS
Trigger: AGAATGCCATCTCGTCATACTGTCGCTGAAGAGCCAAACCTTAGATGCAGAAACAGATGTGTTATGTGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000461381.5
ENST00000472166.1
ENST00000486271.5
ENST00000494575.5
ENST00000496206.5
ENST00000496340.1
CDS CCA 72 bp TCTAAGGTTTGGCTCTTCAGCGACAGTATGACGAGATaGCATTCTTTAATTACAGCTGCAATGCAAAGGTCA +
Preference number: 6 (lower is better)
Translates to: SKVWLFSDSMTR*HSLITAAMQRS
Trigger: TGACCTTTGCATTGCAGCTGTAATTAAAGAATGCCATCTCGTCATACTGTCGCTGAAGAGCCAAACCTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314400.10
ENST00000383675.6
ENST00000461381.5
ENST00000486271.5
ENST00000494575.5
ENST00000496206.5
ENST00000496340.1
CDS CCA 72 bp TCTAAGGTTTGGCTCTTCAGCGACAGTATGACGAGATaGCATTCTTTAATTACAGCTGCAATGCAAAGGTTC +
Preference number: 6 (lower is better)
Translates to: SKVWLFSDSMTR*HSLITAAMQRF
Trigger: GAACCTTTGCATTGCAGCTGTAATTAAAGAATGCCATCTCGTCATACTGTCGCTGAAGAGCCAAACCTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472166.1
CDS TCA 72 bp ACTAAGAAGGCACTAAGCTTAGAGCTGGGGATAAAATaGAAAGATTCAATCTCTGCCCTTGGTAAGAAGCAT +
Preference number: 6 (lower is better)
Translates to: TKKALSLELGIK*KDSISALGKKH
Trigger: ATGCTTCTTACCAAGGGCAGAGATTGAATCTTTTCATTTTATCCCCAGCTCTAAGCTTAGTGCCTTCTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464816.1