RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NEO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000067141

Ensembl transcript IDs: ENST00000261908.11, ENST00000339362.9, ENST00000558485.1, ENST00000558807.1, ENST00000558886.1, ENST00000558964.5, ENST00000560262.5, ENST00000560328.1, ENST00000560352.5, ENST00000560407.1, ENST00000560808.1

Found 1075 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAGGCTTCTTCCAGGCTGACCAGGGGAAGGCAGGTGGCCATGCCTaGAGCCAGCCCTACACAGAGGCGCTGGCCAGTCTGCTGGCTCAT +
Preference number: 1 (lower is better)
Translates to: TGFFQADQGKAGGHA*SQPYTEALASLLAH
Trigger: ATGAGCCAGCAGACTGGCCAGCGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGCCTGGAAGAAGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 90 bp AAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTaGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCA +
Preference number: 1 (lower is better)
Translates to: KRPNKCVQTPVPAAL*APPTGSAATDTGVP
Trigger: TGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR GCA 90 bp GTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGCTGGCCAGTCTaGTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTG +
Preference number: 1 (lower is better)
Translates to: VAMPGASPTQRRWPV*WLILCSQVLSSRTL
Trigger: CAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAGCAGACTGGCCAGCGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR GCA 90 bp CCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTaGCTCGACACAGGCTTCTTCCAGGCTGACCAGGGGAAGGCAGGT +
Preference number: 1 (lower is better)
Translates to: PMVPSPAEYQQAKGS*LDTGFFQADQGKAG
Trigger: ACCTGCCTTCCCCTGGTCAGCCTGGAAGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 90 bp GCCATGCCTGGAGCCAGCCCTACACAGAGGCGCTGGCCAGTCTGCTaGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTAC +
Preference number: 1 (lower is better)
Translates to: AMPGASPTQRRWPVC*LILCSQVLSSRTLY
Trigger: GTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAGCAGACTGGCCAGCGCCTCTGTGTAGGGCTGGCTCCAGGCATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 90 bp TTCCATGTGTGGCTGAGCGGCTGGGTTCACCTCAGACAACTCCTGTaGCTTCATTCTCATCAGGGCTTAGCTGAGCTGCTGGGATGGGGG +
Preference number: 1 (lower is better)
Translates to: FHVWLSGWVHLRQLL*LHSHQGLAELLGWG
Trigger: CCCCCATCCCAGCAGCTCAGCTAAGCCCTGATGAGAATGAAGCCACAGGAGTTGTCTGAGGTGAACCCAGCCGCTCAGCCACACATGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTaGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGC +
Preference number: 1 (lower is better)
Translates to: LFRISLSALVFQNPA*HPHVTSELGSSSSC
Trigger: GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR GCA 90 bp TTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTaGCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCG +
Preference number: 1 (lower is better)
Translates to: LHFSPLPWTQNFGPW*PVLQNISRQREAAS
Trigger: CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 90 bp AGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATaGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCC +
Preference number: 1 (lower is better)
Translates to: RLHFSPLPWTQNFGP*CPVLQNISRQREAA
Trigger: GGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 90 bp AGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTaGGTTCACCTCAGACAACTCCTGTGGCTTCATTCTCATCAGGGC +
Preference number: 1 (lower is better)
Translates to: RTMCKGNGFHVWLSG*VHLRQLLWLHSHQG
Trigger: GCCCTGATGAGAATGAAGCCACAGGAGTTGTCTGAGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 90 bp AATGCCCCAAATACTGAGCATGTTCTTTGGGCAAAAGGTAGTTTCTaGGGAATCTGGCCCTCCTGGTGGCCAGAGTGCTGGGACAGCTCT +
Preference number: 1 (lower is better)
Translates to: NAPNTEHVLWAKGSF*GIWPSWWPECWDSS
Trigger: AGAGCTGTCCCAGCACTCTGGCCACCAGGAGGGCCAGATTCCCCAGAAACTACCTTTTGCCCAAAGAACATGCTCAGTATTTGGGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR TCA 90 bp AGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTaGGCGGCTGGGTTCACCTCAGACAACTCCTGTGGCTTCATTCTC +
Preference number: 1 (lower is better)
Translates to: RTQELCAKAMASMCG*AAGFTSDNSCGFIL
Trigger: GAGAATGAAGCCACAGGAGTTGTCTGAGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR GCA 90 bp GCAAAAGGTAGTTTCTGGGGAATCTGGCCCTCCTGGTGGCCAGAGTaGTGGGACAGCTCTCTTCAGGATCAGTTTAAGTGCACTGGTTTT +
Preference number: 1 (lower is better)
Translates to: AKGSFWGIWPSWWPE*WDSSLQDQFKCTGF
Trigger: AAAACCAGTGCACTTAAACTGATCCTGAAGAGAGCTGTCCCAGCACTCTGGCCACCAGGAGGGCCAGATTCCCCAGAAACTACCTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 90 bp GAAATGCAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTaGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGA +
Preference number: 1 (lower is better)
Translates to: EMQVALLASSLDTKF*PMVPSPAEYQQAKG
Trigger: TCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTGCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 90 bp AAAGGTAGTTTCTGGGGAATCTGGCCCTCCTGGTGGCCAGAGTGCTaGGACAGCTCTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCA +
Preference number: 1 (lower is better)
Translates to: KGSFWGIWPSWWPEC*DSSLQDQFKCTGFP
Trigger: TGGAAAACCAGTGCACTTAAACTGATCCTGAAGAGAGCTGTCCCAGCACTCTGGCCACCAGGAGGGCCAGATTCCCCAGAAACTACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 90 bp CATGTTCTTTGGGCAAAAGGTAGTTTCTGGGGAATCTGGCCCTCCTaGTGGCCAGAGTGCTGGGACAGCTCTCTTCAGGATCAGTTTAAG +
Preference number: 1 (lower is better)
Translates to: HVLWAKGSFWGIWPS*WPECWDSSLQDQFK
Trigger: CTTAAACTGATCCTGAAGAGAGCTGTCCCAGCACTCTGGCCACCAGGAGGGCCAGATTCCCCAGAAACTACCTTTTGCCCAAAGAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 90 bp AATACTGAGCATGTTCTTTGGGCAAAAGGTAGTTTCTGGGGAATCTaGCCCTCCTGGTGGCCAGAGTGCTGGGACAGCTCTCTTCAGGAT +
Preference number: 1 (lower is better)
Translates to: NTEHVLWAKGSFWGI*PSWWPECWDSSLQD
Trigger: ATCCTGAAGAGAGCTGTCCCAGCACTCTGGCCACCAGGAGGGCCAGATTCCCCAGAAACTACCTTTTGCCCAAAGAACATGCTCAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR TCA 90 bp CTACACTCCATAAAGGTGATGCAGTCACAGCACAAAGACACGGCCTaGCCACAAAGTGAAATGCAGGTTGCACTTCTCGCCTCTTCCCTG +
Preference number: 1 (lower is better)
Translates to: LHSIKVMQSQHKDTA*PQSEMQVALLASSL
Trigger: CAGGGAAGAGGCGAGAAGTGCAACCTGCATTTCACTTTGTGGTCAGGCCGTGTCTTTGTGCTGTGACTGCATCACCTTTATGGAGTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR TCA 90 bp TTCAAAGGCAGGTGGCCTGGGGTACCCACTGGTGGTTTCAGCAGCTaGTCTCTTCTTGGCTATAGAACTGAAGCCCGATTTACTGTCTAC +
Preference number: 1 (lower is better)
Translates to: FKGRWPGVPTGGFSS*SLLGYRTEARFTVY
Trigger: GTAGACAGTAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAGTGGGTACCCCAGGCCACCTGCCTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 90 bp CCTGACCACAAAGTGAAATGCAGGTTGCACTTCTCGCCTCTTCCCTaGACACAAAATTTTGGCCCATGGTGCCCAGTCCTGCAGAATATC +
Preference number: 1 (lower is better)
Translates to: PDHKVKCRLHFSPLP*TQNFGPWCPVLQNI
Trigger: GATATTCTGCAGGACTGGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTGCATTTCACTTTGTGGTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 90 bp ACAAGATCAAACATGGCAAATCCCCAAGTTCAAAGGCAGGTGGCCTaGGGTACCCACTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTA +
Preference number: 1 (lower is better)
Translates to: TRSNMANPQVQRQVA*GTHWWFQQLISSWL
Trigger: TAGCCAAGAAGAGATCAGCTGCTGAAACCACCAGTGGGTACCCCAGGCCACCTGCCTTTGAACTTGGGGATTTGCCATGTTTGATCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 90 bp AAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTaGCTGAGCGGCTGGGTTCACCTCAGACAACTCCTGTGGCTTCAT +
Preference number: 1 (lower is better)
Translates to: KKNPRTMCKGNGFHV*LSGWVHLRQLLWLH
Trigger: ATGAAGCCACAGGAGTTGTCTGAGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR TCA 90 bp AAAGGTGATGCAGTCACAGCACAAAGACACGGCCTGACCACAAAGTaGAATGCAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATT +
Preference number: 1 (lower is better)
Translates to: KGDAVTAQRHGLTTK*NAGCTSRLFPGHKI
Trigger: AATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTGCATTTCACTTTGTGGTCAGGCCGTGTCTTTGTGCTGTGACTGCATCACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR GCA 90 bp ACCTCAGCTCCTTACCTTTTTAGGAAAAAGAACCCAAGAACTATGTaGAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCAC +
Preference number: 1 (lower is better)
Translates to: TSAPYLFRKKNPRTM*KGNGFHVWLSGWVH
Trigger: GTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAAGGTAAGGAGCTGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR GCA 90 bp CCTCAAAGAGAGCCAATAATAGCAGCAGGAAAGGGTCTCCATCCTTaGTTTCTGATTTACAGAATGGGGTCAGGCTCTTACCCTATTCTG +
Preference number: 1 (lower is better)
Translates to: PQREPIIAAGKGLHP*FLIYRMGSGSYPIL
Trigger: CAGAATAGGGTAAGAGCCTGACCCCATTCTGTAAATCAGAAAGCAAGGATGGAGACCCTTTCCTGCTGCTATTATTGGCTCTCTTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR GCA 90 bp ATTGCACAGAAGAATTTTAAAACCAGATCCAAATCAAACTCCAGTTaGAACGTAGTGACAATAAGGATGGACATGCCAGGAAAGGACAAT +
Preference number: 1 (lower is better)
Translates to: IAQKNFKTRSKSNSS*NVVTIRMDMPGKDN
Trigger: ATTGTCCTTTCCTGGCATGTCCATCCTTATTGTCACTACGTTGCAACTGGAGTTTGATTTGGATCTGGTTTTAAAATTCTTCTGTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR TCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCGCTTCCATGTGTGGCTaGGCGGCTGGGTTCACCTCA +
Preference number: 2 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSASMCG*AAGFTS
Trigger: TGAGGTGAACCCAGCCGCTCAGCCACACATGGAAGC...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCCCTACACAGAGGCGCTaGCCAGTCTGCTGGCTCATT +
Preference number: 2 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCPTQRR*PVCWLI
Trigger: AATGAGCCAGCAGACTGGCCAGCGCCTCTGTGTAGG...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACCAGGGGAAGGCAGGTaGCCATGCCTGGAGCCAGCC +
Preference number: 2 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRPGEGR*PCLEPA
Trigger: GGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGG...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCGTGTGGCTGAGCGGCTaGGTTCACCTCAGACAACTC +
Preference number: 2 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCVWLSG*VHLRQL
Trigger: GAGTTGTCTGAGGTGAACCCAGCCGCTCAGCCACAC...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCTTCCAGAATCCCGCCTaGCACCCCCATGTGACCAGC +
Preference number: 2 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPFQNPA*HPHVTS
Trigger: GCTGGTCACATGGGGGTGCCAGGCGGGATTCTGGAA...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR TCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCATTCTTACCAGGCTATaGCCAAGACATCAGGGCCGC +
Preference number: 2 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSILTRL*PRHQGR
Trigger: GCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAAT...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCAGGCGCTGGCCAGTCTaGTGGCTCATTCTGTGTTCT +
Preference number: 2 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCRRWPV*WLILCS
Trigger: AGAACACAGAATGAGCCAGCAGACTGGCCAGCGCCT...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCGGGAGTAGGGGAAGATaGCTGAGCGTCAGTCGTGTG +
Preference number: 2 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPGSRGR*LSVSRV
Trigger: CACACGACTGACGCTCAGGCATCTTCCCCTACTCCC...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCAGGGGCTCTGAAGTGTaGAAGAGAGCGCTGGACTGG +
Preference number: 2 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPRGSEV*KRALDW
Trigger: CCAGTCCAGCGCTCTCTTCCACACTTCAGAGCCCCT...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR TCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCTTCCAGACTCAGGTTTaGAGTCAGGTCCTGGTGAAG +
Preference number: 2 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCFQTQV*SQVLVK
Trigger: CTTCACCAGGACCTGACTTCAAACCTGAGTCTGGAA...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR TCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCCACCCGCCCCAATACTaGAACTGCACAGAAAGCAAC +
Preference number: 2 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPHPPQY*NCTESN
Trigger: GTTGCTTTCTGTGCAGTTTCAGTATTGGGGCGGGTG...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCGGCAGCAGCAGTTCCTaGATTGCACCTTTCATTGCC +
Preference number: 2 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPGSSSS*IAPFIA
Trigger: GGCAATGAAAGGTGCAATGCAGGAACTGCTGCTGCC...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCCCCTCCCACAGGCAGTaGGGCGACAGACACAGGTGT +
Preference number: 2 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGPSHRQ*GDRHRC
Trigger: ACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGG...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCAAGAGAGCGCTGGACTaGCTGAAGACTGAACTAGAG +
Preference number: 2 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCKRALD*LKTELE
Trigger: CTCTAGTTCAGTCTTCAGCCAGTCCAGCGCTCTCTT...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCTATGTGCAAAGGCAATaGCTTCCATGTGTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSYVQRQ*LPCVAE
Trigger: CTCAGCCACACATGGAAGCCATTGCCTTTGCACATA...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR TCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCGCTTCCATGTGTGGCTaGGCGGCTGGGTTCACCTCA +
Preference number: 2 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGASMCG*AAGFTS
Trigger: TGAGGTGAACCCAGCCGCTCAGCCACACATGGAAGC...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCGATGCTTCCATTCTCTaGAGGCTTCTGGAAGAAAGT +
Preference number: 2 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSDASIL*RLLEES
Trigger: ACTTTCTTCCAGAAGCCTGCAGAGAATGGAAGCATC...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCAAGAGAGCGCTGGACTaGCTGAAGACTGAACTAGAG +
Preference number: 2 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPKRALD*LKTELE
Trigger: CTCTAGTTCAGTCTTCAGCCAGTCCAGCGCTCTCTT...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR TCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCTCCATCCTTGCTTTCTaGTTTACAGAATGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCSILAF*FTEWGQ
Trigger: CTGACCCCATTCTGTAAATCAGAAAGCAAGGATGGA...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCCAGGCAAAGGGAAGCTaGCTCGACACAGGCTTCTTC +
Preference number: 2 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGQAKGS*LDTGFF
Trigger: GAAGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTG...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCAAGGGTCTCCATCCTTaGTTTCTGATTTACAGAATG +
Preference number: 2 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCKGLHP*FLIYRM
Trigger: CATTCTGTAAATCAGAAAGCAAGGATGGAGACCCTT...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCTGTTTCCGCTGTCCCTaGCCTTGTTACTTGAAAAAT +
Preference number: 2 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPCFRCP*PCYLKN
Trigger: ATTTTTCAAGTAACAAGGGCAGGGACAGCGGAAACA...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTACCAGGGGAAGGCAGGTaGCCATGCCTGGAGCCAGCC +
Preference number: 2 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELPGEGR*PCLEPA
Trigger: GGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGG...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR TCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCTCTCTGAAGGGGCTCTaGAGTGTGGAAGAGAGCGCT +
Preference number: 2 (lower is better)
Translates to: LFRISLSALVFQNPAWHPSLKGL*SVEESA
Trigger: AGCGCTCTCTTCCACACTTCAGAGCCCCTTCAGAGA...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCGGGAGTAGGGGAAGATaGCTGAGCGTCAGTCGTGTG +
Preference number: 2 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFGSRGR*LSVSRV
Trigger: CACACGACTGACGCTCAGGCATCTTCCCCTACTCCC...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCCGCTGGCCAGTCTGCTaGCTCATTCTGTGTTCTCAA +
Preference number: 2 (lower is better)
Translates to: QVALLASSLDTKFWPMVPRWPVC*LILCSQ
Trigger: TTGAGAACACAGAATGAGCCAGCAGACTGGCCAGCG...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCCTTTCCATACATAATTaGAACAAGCAGTCAAATGTC +
Preference number: 2 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSLSIHN*NKQSNV
Trigger: GACATTTGACTGCTTGTTCCAATTATGTATGGAAAG...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCGTGTGGCTGAGCGGCTaGGTTCACCTCAGACAACTC +
Preference number: 2 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFVWLSG*VHLRQL
Trigger: GAGTTGTCTGAGGTGAACCCAGCCGCTCAGCCACAC...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCCAAAGGCAGGTGGCCTaGGGTACCCACTGGTGGTTT +
Preference number: 2 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFQRQVA*GTHWWF
Trigger: AAACCACCAGTGGGTACCCCAGGCCACCTGCCTTTG...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CAA 90 bp GGTGGCCTGGGGTACCCACTGGTGGTTTCAGCAGCTGATCTCTTCTaGGCTATAGAACTGAAGCCCGATTTACTGTCTACACTGCCTTCC +
Preference number: 2 (lower is better)
Translates to: GGLGYPLVVSAADLF*AIELKPDLLSTLPS
Trigger: GGAAGGCAGTGTAGACAGTAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAGTGGGTACCCCAGGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCAGGCGCTGGCCAGTCTaGTGGCTCATTCTGTGTTCT +
Preference number: 2 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFRRWPV*WLILCS
Trigger: AGAACACAGAATGAGCCAGCAGACTGGCCAGCGCCT...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCGACCACAAAGTGAAATaGAGGTTGCACTTCTCGCCT +
Preference number: 2 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGDHKVK*RLHFSP
Trigger: AGGCGAGAAGTGCAACCTGCATTTCACTTTGTGGTC...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCTTCTCGCCTCTTCCCTaGACACAAAATTTTGGCCCA +
Preference number: 2 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGFSPLP*TQNFGP
Trigger: TGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAA...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCAAGTTCAAAGGCAGGTaGCCTGGGGTACCCACTGGT +
Preference number: 2 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFKFKGR*PGVPTG
Trigger: ACCAGTGGGTACCCCAGGCCACCTGCCTTTGAACTT...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCTGGTGGCCAGAGTGCTaGGACAGCTCTCTTCAGGAT +
Preference number: 2 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFWWPEC*DSSLQD
Trigger: ATCCTGAAGAGAGCTGTCCCAGCACTCTGGCCACCA...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR TCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGTTCCAGACTCAGGTTTaGAGTCAGGTCCTGGTGAAG +
Preference number: 2 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEFQTQV*SQVLVK
Trigger: CTTCACCAGGACCTGACTTCAAACCTGAGTCTGGAA...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGCATGGTGCCCAGTCCTaGAGAATATCAGCAGGCAAA +
Preference number: 2 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEHGAQS*RISAGK
Trigger: TTTGCCTGCTGATATTCTGCAGGACTGGGCACCATG...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCCATGGTGCCCAGTCCTaGAGAATATCAGCAGGCAAA +
Preference number: 2 (lower is better)
Translates to: LFRISLSALVFQNPAWHPHGAQS*RISAGK
Trigger: TTTGCCTGCTGATATTCTGCAGGACTGGGCACCATG...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTCATGGTGCCCAGTCCTaGAGAATATCAGCAGGCAAA +
Preference number: 2 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPHGAQS*RISAGK
Trigger: TTTGCCTGCTGATATTCTGCAGGACTGGGCACCATG...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTCTGGACACAAAATTTTaGCCCATGGTGCCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPLDTKF*PMVPSP
Trigger: AGGACTGGGCACCATGGGCCAAAATTTTGTGTCCAG...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CAA 90 bp AGTCACAGCACAAAGACACGGCCTGACCACAAAGTGAAATGCAGGTaGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGG +
Preference number: 2 (lower is better)
Translates to: SHSTKTRPDHKVKCR*HFSPLPWTQNFGPW
Trigger: CCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTGCATTTCACTTTGTGGTCAGGCCGTGTCTTTGTGCTGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCAATTTTGGCCCATGGTaGCCAGTCCTGCAGAATATC +
Preference number: 2 (lower is better)
Translates to: LFRISLSALVFQNPAWHPNFGPW*PVLQNI
Trigger: GATATTCTGCAGGACTGGGCACCATGGGCCAAAATT...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCCAAAATTTTGGCCCATaGTGCCCAGTCCTGCAGAAT +
Preference number: 2 (lower is better)
Translates to: LFRISLSALVFQNPAWHPQNFGP*CPVLQN
Trigger: ATTCTGCAGGACTGGGCACCATGGGCCAAAATTTTG...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTAGTGTGGCTGAGCGGCTaGGTTCACCTCAGACAACTC +
Preference number: 2 (lower is better)
Translates to: LVVSAADLFLAIELKPDLVWLSG*VHLRQL
Trigger: GAGTTGTCTGAGGTGAACCCAGCCGCTCAGCCACAC...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCACTGAGCATGTTCTTTaGGCAAAAGGTAGTTTCTGG +
Preference number: 2 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGTEHVL*AKGSFW
Trigger: CCAGAAACTACCTTTTGCCCAAAGAACATGCTCAGT...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGAATTTTGGCCCATGGTaGCCAGTCCTGCAGAATATC +
Preference number: 2 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGNFGPW*PVLQNI
Trigger: GATATTCTGCAGGACTGGGCACCATGGGCCAAAATT...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGGACCACAAAGTGAAATaGAGGTTGCACTTCTCGCCT +
Preference number: 2 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGDHKVK*RLHFSP
Trigger: AGGCGAGAAGTGCAACCTGCATTTCACTTTGTGGTC...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR TCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGCACCCGCCCCAATACTaGAACTGCACAGAAAGCAAC +
Preference number: 2 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLHPPQY*NCTESN
Trigger: GTTGCTTTCTGTGCAGTTTCAGTATTGGGGCGGGTG...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCTTCTGTGTTCTCAAGTaGTGTCCTCTCGTACTCTGT +
Preference number: 2 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFFCVLK*CPLVLC
Trigger: ACAGAGTACGAGAGGACAGCACTTGAGAACACAGAA...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGGATGCTTCCATTCTCTaGAGGCTTCTGGAAGAAAGT +
Preference number: 2 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGDASIL*RLLEES
Trigger: ACTTTCTTCCAGAAGCCTGCAGAGAATGGAAGCATC...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCAAATCAAACTCCAGTTaGAACGTAGTGACAATAAGG +
Preference number: 2 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGKSNSS*NVVTIR
Trigger: CCTTATTGTCACTACGTTGCAACTGGAGTTTGATTT...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR TCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCTTACCCTATTCTGTGTaGCTCAGGCAGTTAGAAATA +
Preference number: 2 (lower is better)
Translates to: LFRISLSALVFQNPAWHPLPYSV*LRQLEI
Trigger: TATTTCTAACTGCCTGAGTCACACAGAATAGGGTAA...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR TCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGTTACCCTATTCTGTGTaGCTCAGGCAGTTAGAAATA +
Preference number: 2 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGELPYSV*LRQLEI
Trigger: TATTTCTAACTGCCTGAGTCACACAGAATAGGGTAA...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGAAGGGTCTCCATCCTTaGTTTCTGATTTACAGAATG +
Preference number: 2 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEKGLHP*FLIYRM
Trigger: CATTCTGTAAATCAGAAAGCAAGGATGGAGACCCTT...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCCAGGATCAGTTTAAGTaGACTGGTTTTCCAGAATCC +
Preference number: 2 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFQDQFK*TGFPES
Trigger: GGATTCTGGAAAACCAGTGCACTTAAACTGATCCTG...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAATTTTGGCCCATGGTaGCCAGTCCTGCAGAATATC +
Preference number: 2 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLNFGPW*PVLQNI
Trigger: GATATTCTGCAGGACTGGGCACCATGGGCCAAAATT...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTGACCACAAAGTGAAATaGAGGTTGCACTTCTCGCCT +
Preference number: 2 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVDHKVK*RLHFSP
Trigger: AGGCGAGAAGTGCAACCTGCATTTCACTTTGTGGTC...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCAAATCAAACTCCAGTTaGAACGTAGTGACAATAAGG +
Preference number: 2 (lower is better)
Translates to: LFRISLSALVFQNPAWHPKSNSS*NVVTIR
Trigger: CCTTATTGTCACTACGTTGCAACTGGAGTTTGATTT...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTCGCTGGCCAGTCTGCTaGCTCATTCTGTGTTCTCAA +
Preference number: 2 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFRWPVC*LILCSQ
Trigger: TTGAGAACACAGAATGAGCCAGCAGACTGGCCAGCG...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTCCTACACAGAGGCGCTaGCCAGTCTGCTGGCTCATT +
Preference number: 2 (lower is better)
Translates to: FLGKRTQELCAKAMASMCPTQRR*PVCWLI
Trigger: AATGAGCCAGCAGACTGGCCAGCGCCTCTGTGTAGG...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTACAAAATTTTGGCCCATaGTGCCCAGTCCTGCAGAAT +
Preference number: 2 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELQNFGP*CPVLQN
Trigger: ATTCTGCAGGACTGGGCACCATGGGCCAAAATTTTG...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CAA 90 bp TCCTCAAAGAGAGCCAATAATAGCAGCAGGAAAGGGTCTCCATCCTaGCTTTCTGATTTACAGAATGGGGTCAGGCTCTTACCCTATTCT +
Preference number: 2 (lower is better)
Translates to: SSKRANNSSRKGSPS*LSDLQNGVRLLPYS
Trigger: AGAATAGGGTAAGAGCCTGACCCCATTCTGTAAATCAGAAAGCAAGGATGGAGACCCTTTCCTGCTGCTATTATTGGCTCTCTTTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR TCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTCACAAAGACACGGCCTaGCCACAAAGTGAAATGCAG +
Preference number: 2 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFHKDTA*PQSEMQ
Trigger: CTGCATTTCACTTTGTGGTCAGGCCGTGTCTTTGTG...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCACAGCTGGTAGAGGATaGAATGACTCAGAATTAAAA +
Preference number: 2 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFTAGRG*NDSELK
Trigger: TTTTAATTCTGAGTCATTGCATCCTCTACCAGCTGT...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTAGATGCTTCCATTCTCTaGAGGCTTCTGGAAGAAAGT +
Preference number: 2 (lower is better)
Translates to: LVVSAADLFLAIELKPDLDASIL*RLLEES
Trigger: ACTTTCTTCCAGAAGCCTGCAGAGAATGGAAGCATC...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGGGCAGCAGCAGTTCCTaGATTGCACCTTTCATTGCC +
Preference number: 2 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMGSSSS*IAPFIA
Trigger: GGCAATGAAAGGTGCAATGCAGGAACTGCTGCTGCC...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTCTGGACACAAAATTTTaGCCCATGGTGCCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFLDTKF*PMVPSP
Trigger: AGGACTGGGCACCATGGGCCAAAATTTTGTGTCCAG...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGGCAAAAGGTAGTTTCTaGGGAATCTGGCCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMAKGSF*GIWPSW
Trigger: CCAGGAGGGCCAGATTCCCCAGAAACTACCTTTTGC...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTCGCTGGCCAGTCTGCTaGCTCATTCTGTGTTCTCAA +
Preference number: 2 (lower is better)
Translates to: FLGKRTQELCAKAMASMCRWPVC*LILCSQ
Trigger: TTGAGAACACAGAATGAGCCAGCAGACTGGCCAGCG...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAATTCTCGCCTCTTCCCTaGACACAAAATTTTGGCCCA +
Preference number: 2 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQFSPLP*TQNFGP
Trigger: TGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAA...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATACAGCTGGTAGAGGATaGAATGACTCAGAATTAAAA +
Preference number: 2 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHTAGRG*NDSELK
Trigger: TTTTAATTCTGAGTCATTGCATCCTCTACCAGCTGT...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCATTCTCGCCTCTTCCCTaGACACAAAATTTTGGCCCA +
Preference number: 2 (lower is better)
Translates to: QTSSFLNLQLPQREPIIAFSPLP*TQNFGP
Trigger: TGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAA...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGTATGTGCAAAGGCAATaGCTTCCATGTGTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMYVQRQ*LPCVAE
Trigger: CTCAGCCACACATGGAAGCCATTGCCTTTGCACATA...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CAA 90 bp ATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTaGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAA +
Preference number: 2 (lower is better)
Translates to: ILCSQVLSSRTLYNS*FSRVSSKTSRLRFE
Trigger: TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCATTCTGTGTTCTCAAGTaGTGTCCTCTCGTACTCTGT +
Preference number: 2 (lower is better)
Translates to: QTSSFLNLQLPQREPIIAFCVLK*CPLVLC
Trigger: ACAGAGTACGAGAGGACAGCACTTGAGAACACAGAA...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGACAGCTGGTAGAGGATaGAATGACTCAGAATTAAAA +
Preference number: 2 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLTAGRG*NDSELK
Trigger: TTTTAATTCTGAGTCATTGCATCCTCTACCAGCTGT...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCACACCAAGGACTTCCTTaGTTTTGGATGGCGTTTTTG +
Preference number: 2 (lower is better)
Translates to: QTSSFLNLQLPQREPIIAHQGLP*FWMAFL
Trigger: CAAAAACGCCATCCAAAACCAAGGAAGTCCTTGGTG...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CAA 90 bp AGACTTTCCATACATAATTGGAACAAGCAGTCAAATGTCAACCACTaGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTTTT +
Preference number: 2 (lower is better)
Translates to: RLSIHNWNKQSNVNH*WRTPRTSLVLDGVF
Trigger: AAAAACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATTTGACTGCTTGTTCCAATTATGTATGGAAAGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CCA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTCACCAAGGACTTCCTTaGTTTTGGATGGCGTTTTTG +
Preference number: 2 (lower is better)
Translates to: FLGKRTQELCAKAMASMCHQGLP*FWMAFL
Trigger: CAAAAACGCCATCCAAAACCAAGGAAGTCCTTGGTG...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR GCA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTAAATCAAACTCCAGTTaGAACGTAGTGACAATAAGG +
Preference number: 2 (lower is better)
Translates to: FLGKRTQELCAKAMASMCKSNSS*NVVTIR
Trigger: CCTTATTGTCACTACGTTGCAACTGGAGTTTGATTT...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 72 bp AACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTaGGCCCCTCCCACAGGCAGTGCGGCGACAGACACA +
Preference number: 3 (lower is better)
Translates to: NKCVQTPVPAAL*APPTGSAATDT
Trigger: TGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCCTTCCAGACTCAGGTTaGAAGTCAGGTCCTGGTGAA +
Preference number: 3 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSLPDSG*KSGPGE
Trigger: TTCACCAGGACCTGACTTCAAACCTGAGTCTGGAAG...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR GCA 72 bp CCTGGAGCCAGCCCTACACAGAGGCGCTGGCCAGTCTaGTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCT +
Preference number: 3 (lower is better)
Translates to: PGASPTQRRWPV*WLILCSQVLSS
Trigger: AGAGGACAGCACTTGAGAACACAGAATGAGCCAGCAGACTGGCCAGCGCCTCTGTGTAGGGCTGGCTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 72 bp ATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTaGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: ISLSALVFQNPA*HPHVTSELGSS
Trigger: GCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAAGGGTCTCCATCCTaGCTTTCTGATTTACAGAAT +
Preference number: 3 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSKGSPS*LSDLQN
Trigger: ATTCTGTAAATCAGAAAGCAAGGATGGAGACCCTTT...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCAGAAGCAGTCAGGGTTaGTGGGAGGAAATGCCCCAA +
Preference number: 3 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGRSSQG*WEEMPQ
Trigger: TTGGGGCATTTCCTCCCACAAACCCTGACTGCTTCT...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR TCA 72 bp GAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTaGGCGGCTGGGTTCACCTCAGACAACTCCTGTGGC +
Preference number: 3 (lower is better)
Translates to: ELCAKAMASMCG*AAGFTSDNSCG
Trigger: GCCACAGGAGTTGTCTGAGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 72 bp CATGTTCTTTGGGCAAAAGGTAGTTTCTGGGGAATCTaGCCCTCCTGGTGGCCAGAGTGCTGGGACAGCTCT +
Preference number: 3 (lower is better)
Translates to: HVLWAKGSFWGI*PSWWPECWDSS
Trigger: AGAGCTGTCCCAGCACTCTGGCCACCAGGAGGGCCAGATTCCCCAGAAACTACCTTTTGCCCAAAGAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTCCTGGACACAAAATTTaGGCCCATGGTGCCCAGTCC +
Preference number: 3 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPPGHKI*AHGAQS
Trigger: GGACTGGGCACCATGGGCCAAAATTTTGTGTCCAGG...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR TCA 72 bp GCAGTCACAGCACAAAGACACGGCCTGACCACAAAGTaGAATGCAGGTTGCACTTCTCGCCTCTTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: AVTAQRHGLTTK*NAGCTSRLFPG
Trigger: TCCAGGGAAGAGGCGAGAAGTGCAACCTGCATTTCACTTTGTGGTCAGGCCGTGTCTTTGTGCTGTGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR TCA 72 bp CCCCAATTCTGTGGCAGTATCCAGGTACCAAGGCCCTaGGGTAACAGAAGCAGTCAGGGTTTGTGGGAGGAA +
Preference number: 3 (lower is better)
Translates to: PQFCGSIQVPRP*GNRSSQGLWEE
Trigger: TTCCTCCCACAAACCCTGACTGCTTCTGTTACCTCAGGGCCTTGGTACCTGGATACTGCCACAGAATTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 72 bp AACATGGCAAATCCCCAAGTTCAAAGGCAGGTGGCCTaGGGTACCCACTGGTGGTTTCAGCAGCTGATCTCT +
Preference number: 3 (lower is better)
Translates to: NMANPQVQRQVA*GTHWWFQQLIS
Trigger: AGAGATCAGCTGCTGAAACCACCAGTGGGTACCCCAGGCCACCTGCCTTTGAACTTGGGGATTTGCCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGCCTGGACACAAAATTTaGGCCCATGGTGCCCAGTCC +
Preference number: 3 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGPGHKI*AHGAQS
Trigger: GGACTGGGCACCATGGGCCAAAATTTTGTGTCCAGG...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR TCA 72 bp GTCTCATTCCTGCTAATGCTTTCTCTGAAGGGGCTCTaGAGTGTGGAAGAGAGCGCTGGACTGGCTGAAGAC +
Preference number: 3 (lower is better)
Translates to: VSFLLMLSLKGL*SVEESAGLAED
Trigger: GTCTTCAGCCAGTCCAGCGCTCTCTTCCACACTTCAGAGCCCCTTCAGAGAAAGCATTAGCAGGAATGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR TCA 72 bp AGGTGGCCTGGGGTACCCACTGGTGGTTTCAGCAGCTaGTCTCTTCTTGGCTATAGAACTGAAGCCCGATTT +
Preference number: 3 (lower is better)
Translates to: RWPGVPTGGFSS*SLLGYRTEARF
Trigger: AAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAGTGGGTACCCCAGGCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR GCA 72 bp TCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTaGCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAA +
Preference number: 3 (lower is better)
Translates to: SPLPWTQNFGPW*PVLQNISRQRE
Trigger: TTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR GCA 72 bp CACAGCACAAAGACACGGCCTGACCACAAAGTGAAATaGAGGTTGCACTTCTCGCCTCTTCCCTGGACACAA +
Preference number: 3 (lower is better)
Translates to: HSTKTRPDHKVK*RLHFSPLPWTQ
Trigger: TTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTGCATTTCACTTTGTGGTCAGGCCGTGTCTTTGTGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 72 bp TTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATaGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGG +
Preference number: 3 (lower is better)
Translates to: FSPLPWTQNFGP*CPVLQNISRQR
Trigger: CCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 72 bp GTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTaGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAG +
Preference number: 3 (lower is better)
Translates to: VALLASSLDTKF*PMVPSPAEYQQ
Trigger: CTGCTGATATTCTGCAGGACTGGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCAAAGTGAAATGCAGGTaGCACTTCTCGCCTCTTCCC +
Preference number: 3 (lower is better)
Translates to: LFRISLSALVFQNPAWHPKVKCR*HFSPLP
Trigger: GGGAAGAGGCGAGAAGTGCAACCTGCATTTCACTTT...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAACTCTGTACAATTCCTaGTTTTCAAGGGTAAGTTCC +
Preference number: 3 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRTLYNS*FSRVSS
Trigger: GGAACTTACCCTTGAAAACAAGGAATTGTACAGAGT...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CCA 72 bp AAAGTGAAATGCAGGTTGCACTTCTCGCCTCTTCCCTaGACACAAAATTTTGGCCCATGGTGCCCAGTCCTG +
Preference number: 3 (lower is better)
Translates to: KVKCRLHFSPLP*TQNFGPWCPVL
Trigger: CAGGACTGGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTGCATTTCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCAGGACTTCCTTGGTTTaGGATGGCGTTTTTGTTTTT +
Preference number: 3 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGRTSLV*DGVFVF
Trigger: AAAAACAAAAACGCCATCCAAAACCAAGGAAGTCCT...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR TCA 72 bp ATAAAGGTGATGCAGTCACAGCACAAAGACACGGCCTaGCCACAAAGTGAAATGCAGGTTGCACTTCTCGCC +
Preference number: 3 (lower is better)
Translates to: IKVMQSQHKDTA*PQSEMQVALLA
Trigger: GGCGAGAAGTGCAACCTGCATTTCACTTTGTGGTCAGGCCGTGTCTTTGTGCTGTGACTGCATCACCTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCACTCTGTACAATTCCTaGTTTTCAAGGGTAAGTTCC +
Preference number: 3 (lower is better)
Translates to: QVALLASSLDTKFWPMVPTLYNS*FSRVSS
Trigger: GGAACTTACCCTTGAAAACAAGGAATTGTACAGAGT...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR GCA 72 bp GCTGGCCAGTCTGCTGGCTCATTCTGTGTTCTCAAGTaGTGTCCTCTCGTACTCTGTACAATTCCTTGTTTT +
Preference number: 3 (lower is better)
Translates to: AGQSAGSFCVLK*CPLVLCTIPCF
Trigger: AAAACAAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAGCAGACTGGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTCTTCCAGACTCAGGTTaGAAGTCAGGTCCTGGTGAA +
Preference number: 3 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVLPDSG*KSGPGE
Trigger: TTCACCAGGACCTGACTTCAAACCTGAGTCTGGAAG...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTAAAGTGAAATGCAGGTaGCACTTCTCGCCTCTTCCC +
Preference number: 3 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVKVKCR*HFSPLP
Trigger: GGGAAGAGGCGAGAAGTGCAACCTGCATTTCACTTT...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTAGGACTTCCTTGGTTTaGGATGGCGTTTTTGTTTTT +
Preference number: 3 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPRTSLV*DGVFVF
Trigger: AAAAACAAAAACGCCATCCAAAACCAAGGAAGTCCT...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGCAAATCAAACTCCAGTaGCAACGTAGTGACAATAAG +
Preference number: 3 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEQIKLQ*QRSDNK
Trigger: CTTATTGTCACTACGTTGCAACTGGAGTTTGATTTG...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCCAAATCAAACTCCAGTaGCAACGTAGTGACAATAAG +
Preference number: 3 (lower is better)
Translates to: LFRISLSALVFQNPAWHPQIKLQ*QRSDNK
Trigger: CTTATTGTCACTACGTTGCAACTGGAGTTTGATTTG...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCAGGACTTCCTTGGTTTaGGATGGCGTTTTTGTTTTT +
Preference number: 3 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFRTSLV*DGVFVF
Trigger: AAAAACAAAAACGCCATCCAAAACCAAGGAAGTCCT...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATACACCAAGGACTTCCTaGGTTTTGGATGGCGTTTTT +
Preference number: 3 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHTPRTS*VLDGVF
Trigger: AAAAACGCCATCCAAAACCAAGGAAGTCCTTGGTGT...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATTCAAATGTCAACCACTaGTGGAGAACACCAAGGACT +
Preference number: 3 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHSNVNH*WRTPRT
Trigger: AGTCCTTGGTGTTCTCCACAAGTGGTTGACATTTGA...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAACTTCCAGACTCAGGTTaGAAGTCAGGTCCTGGTGAA +
Preference number: 3 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQLPDSG*KSGPGE
Trigger: TTCACCAGGACCTGACTTCAAACCTGAGTCTGGAAG...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTAACACCAAGGACTTCCTaGGTTTTGGATGGCGTTTTT +
Preference number: 3 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELTPRTS*VLDGVF
Trigger: AAAAACGCCATCCAAAACCAAGGAAGTCCTTGGTGT...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR-3UTR CAA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTATCAAATGTCAACCACTaGTGGAGAACACCAAGGACT +
Preference number: 3 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELSNVNH*WRTPRT
Trigger: AGTCCTTGGTGTTCTCCACAAGTGGTTGACATTTGA...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR TCA 72 bp TTACAGAATGGGGTCAGGCTCTTACCCTATTCTGTGTaGCTCAGGCAGTTAGAAATACAACATCTGGCTCCT +
Preference number: 3 (lower is better)
Translates to: LQNGVRLLPYSV*LRQLEIQHLAP
Trigger: AGGAGCCAGATGTTGTATTTCTAACTGCCTGAGTCACACAGAATAGGGTAAGAGCCTGACCCCATTCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR GCA 72 bp AAGAATTTTAAAACCAGATCCAAATCAAACTCCAGTTaGAACGTAGTGACAATAAGGATGGACATGCCAGGA +
Preference number: 3 (lower is better)
Translates to: KNFKTRSKSNSS*NVVTIRMDMPG
Trigger: TCCTGGCATGTCCATCCTTATTGTCACTACGTTGCAACTGGAGTTTGATTTGGATCTGGTTTTAAAATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAGAAGGAGGGGGTGCTaGGGAGTCGCCGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSRRRGC*GVAGLP
Trigger: GGGGAGCCCGGCGACTCCTCAGCACCCCCTCCTTCT...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGCCCCGAGGAAGCTGCTaGGCGGCAGCTCAACCAGGA +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAPRGSC*AAAQPG
Trigger: TCCTGGTTGAGCTGCCGCTCAGCAGCTTCCTCGGGG...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGATCTGGCCCTCCTGGTaGCCAGAGTGCTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAIWPSW*PECWDS
Trigger: GCTGTCCCAGCACTCTGGCCACCAGGAGGGCCAGAT...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGGGATCTGGCACTGTGTaGGGCCTGGTCACAGCACTC +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAGSGTV*GLVTAL
Trigger: GAGTGCTGTGACCAGGCCTCACACAGTGCCAGATCC...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS-3UTR GCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCTCCTGGAGGCGGGATTaGTGGCACGGCGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSSWRRD*WHGEAL
Trigger: AAGAGCTTCGCCGTGCCAGCAATCCCGCCTCCAGGA...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCGCTTCCATGTGTGGCTaGGCGGCTGGGTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCASMCG*AAGFTS
Trigger: TGAGGTGAACCCAGCCGCTCAGCCACACATGGAAGC...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCAGGGCGCCTCCCTCCTaGGGGCGAGAGGCGCTCCGA +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGRAPPS*GREALR
Trigger: TCGGAGCGCCTCTCGCCCTCAGGAGGGAGGCGCCCT...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS-3UTR GCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCCAGCCGGTCCCTCGCTaGAAGCTCGGCTCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGQPVPR*KLGSRG
Trigger: GCCGCGGGAGCCGAGCTTGCAGCGAGGGACCGGCTG...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGTGGAGGCGGGATTGCTaGCACGGCGAAGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAWRRDC*HGEALQ
Trigger: TTGAAGAGCTTCGCCGTGCCAGCAATCCCGCCTCCA...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGCCTACACAGAGGCGCTaGCCAGTCTGCTGGCTCATT +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAPTQRR*PVCWLI
Trigger: AATGAGCCAGCAGACTGGCCAGCGCCTCTGTGTAGG...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGGCCTGGGGTACCCACTaGTGGTTTCAGCAGCTGATC +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAAWGTH*WFQQLI
Trigger: GATCAGCTGCTGAAACCACCAGTGGGTACCCCAGGC...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCTTCCAGAATCCCGCCTaGCACCCCCATGTGACCAGC +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCFQNPA*HPHVTS
Trigger: GCTGGTCACATGGGGGTGCCAGGCGGGATTCTGGAA...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGAGTTTCTGGGGAATCTaGCCCTCCTGGTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEASFWGI*PSWWPE
Trigger: CTCTGGCCACCAGGAGGGCCAGATTCCCCAGAAACT...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCGACATCCCGAGGAGCTaGAGGCAGTGGTCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPDIPRS*RQWSRC
Trigger: ACAACGGGACCACTGCCTTCAGCTCCTCGGGATGTC...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGGGGTCCCATGCCCTTTaGGTTCCGTGCCTGGATTTT +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAGSHAL*VPCLDF
Trigger: AAAATCCAGGCACGGAACTCAAAGGGCATGGGACCC...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGGAGGTGGGGCTCCCATaGGGGCTGTTACTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: GPWCPVLQNISRQREAASEVGLP*GLLLPL
Trigger: GAGCGGCAGTAACAGCCCTCATGGGAGCCCCACCTC...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCTCTCTGAAGGGGCTCTaGAGTGTGGAAGAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSSLKGL*SVEESA
Trigger: AGCGCTCTCTTCCACACTTCAGAGCCCCTTCAGAGA...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCCAGGTACCAAGGCCCTaGGGTAACAGAAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSQVPRP*GNRSSQ
Trigger: CTGACTGCTTCTGTTACCTCAGGGCCTTGGTACCTG...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGCAGGTACCAAGGCCCTaGGGTAACAGAAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAQVPRP*GNRSSQ
Trigger: CTGACTGCTTCTGTTACCTCAGGGCCTTGGTACCTG...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTCTGGCTCCTGGGGACTaGGGCGCGGAGCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASLAPGD*GAEPLL
Trigger: CAGGAGCGGCTCCGCGCCGCAGTCCCCAGGAGCCAG...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR GCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCTGCACGAAGGTTAGGTaGTGGGCCAGGGAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCCTKVR*WARELN
Trigger: GTTCAGCTCCCTGGCCCAGCACCTAACCTTCGTGCA...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCGGGCAGCGAGTTGTCTaGCCACGTAATCCTGATGGT +
Preference number: 4 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSGQRVV*PRNPDG
Trigger: ACCATCAGGATTACGTGGGCAGACAACTCGCTGCCC...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCCTGGCATGGTGTCAGTaGTGGGGGTATTTCGAACGG +
Preference number: 4 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSLAWCQ*WGYFER
Trigger: CCGTTCGAAATACCCCCAGCACTGACACCATGCCAG...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCTCCTGGAGGCGGGATTaGTGGCACGGCGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPSWRRD*WHGEAL
Trigger: AAGAGCTTCGCCGTGCCAGCAATCCCGCCTCCAGGA...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCGGGAGTAGGGGAAGATaGCTGAGCGTCAGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCGSRGR*LSVSRV
Trigger: CACACGACTGACGCTCAGGCATCTTCCCCTACTCCC...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGGGCGAACATGGGCAGTaGGAAGACTCTGGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAGEHGQ*EDSGLN
Trigger: ATTCAGGCCAGAGTCTTCCCACTGCCCATGTTCGCC...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCATAGGTGGGAGGTCCTaGAGGCGGGATTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPIGGRS*RRDCWH
Trigger: GTGCCAGCAATCCCGCCTCCAGGACCTCCCACCTAT...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCGCTGGGCCAGGGAGCTaGACCTCAGGTTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPAGPGS*TSGCVS
Trigger: AGAAACACAACCTGAGGTTCAGCTCCCTGGCCCAGC...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCCTCAGAATGGAAGCCTaGACTCCCACTGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCLRMEA*TPTGGI
Trigger: GATGCCACCAGTGGGAGTTCAGGCTTCCATTCTGAG...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCGAAGTCAGGTCCTGGTaGAGGTCGTCATGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSEVRSW*RSSCCC
Trigger: ACAACAGCATGACGACCTTCACCAGGACCTGACTTC...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGAGGCGAAGCTGCATATaGACGAAGGTTAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEARRSCI*TKVRCW
Trigger: CCAGCACCTAACCTTCGTGCATATGCAGCTTCGCCT...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTGGGAGGAAACCTGGGTaGGCAGTGGGTCGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASGRKPG*AVGRPG
Trigger: CCCGGGCCGACCCACTGCGCACCCAGGTTTCCTCCC...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS-3UTR CCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCACAGGCTGGGGTGGCTaGGAGTCAAAGGGCATCATC +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPTGWGG*ESKGII
Trigger: GATGATGCCCTTTGACTCCCAGCCACCCCAGCCTGT...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGGCAGTGGGAAGACTCTaGCCTGAATCTTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAAVGRL*PESSSW
Trigger: CCAAGAGGAAGATTCAGGCCAGAGTCTTCCCACTGC...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCTGGGAAGGGCGAACATaGGCAGTGGGAAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPWEGRT*AVGRLW
Trigger: CCAGAGTCTTCCCACTGCCCATGTTCGCCCTTCCCA...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGAAGCTCTTCAATGGGTaGGAAGGGCGAACATGGGCA +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAKLFNG*EGRTWA
Trigger: TGCCCATGTTCGCCCTTCCCACCCATTGAAGAGCTT...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCACTGGGAACAACCACTaGCATAGGAGGCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPTGNNH*HRRPAP
Trigger: AGGAGCCGGCCTCCTATGCCAGTGGTTGTTCCCAGT...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCCGCTGGCCAGTCTGCTaGCTCATTCTGTGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSRWPVC*LILCSQ
Trigger: TTGAGAACACAGAATGAGCCAGCAGACTGGCCAGCG...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCAAGTTCAAAGGCAGGTaGCCTGGGGTACCCACTGGT +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCKFKGR*PGVPTG
Trigger: ACCAGTGGGTACCCCAGGCCACCTGCCTTTGAACTT...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCTGGTGGCCAGAGTGCTaGGACAGCTCTCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCWWPEC*DSSLQD
Trigger: ATCCTGAAGAGAGCTGTCCCAGCACTCTGGCCACCA...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCTCCGGGAGGCCGGCGTaGGCGCGCACCTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPSGRPA*ARTSAQ
Trigger: CTGTGCAGAGGTGCGCGCCCACGCCGGCCTCCCGGA...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS-3UTR TCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCTCTCTTCCCCGAGAGTaGGCGGCAGCGGCGGCGACA +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPSLPRE*AAAAAT
Trigger: TGTCGCCGCCGCTGCCGCTCACTCTCGGGGAAGAGA...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCGAGGTGGGGCTCCCATaGGGGCTGTTACTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGEVGLP*GLLLPL
Trigger: GAGCGGCAGTAACAGCCCTCATGGGAGCCCCACCTC...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCGGGCAGCGAGTTGTCTaGCCACGTAATCCTGATGGT +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPGQRVV*PRNPDG
Trigger: ACCATCAGGATTACGTGGGCAGACAACTCGCTGCCC...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCCATGAGGGCTGTTACTaGCGCTCATTGGAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSHEGCY*RSLEVC
Trigger: ACAAACCTCCAATGAGCGGCAGTAACAGCCCTCATG...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGTCGAACAGCAACATCTaGTGTGGAAACTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEASNSNI*CGNSRT
Trigger: GGTCCTGGAGTTTCCACACCAGATGTTGCTGTTCGA...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCCTGAACTCCCACTGGTaGCATCATGGGAGTGGGATC +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPLNSHW*HHGSGI
Trigger: GATCCCACTCCCATGATGCCACCAGTGGGAGTTCAG...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCCTGGACACAAAATTTTaGCCCATGGTGCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSLDTKF*PMVPSP
Trigger: AGGACTGGGCACCATGGGCCAAAATTTTGTGTCCAG...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCTGGGGTACCCACTGGTaGTTTCAGCAGCTGATCTCT +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCWGTHW*FQQLIS
Trigger: AGAGATCAGCTGCTGAAACCACCAGTGGGTACCCCA...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGTTCCAGAATCCCGCCTaGCACCCCCATGTGACCAGC +
Preference number: 4 (lower is better)
Translates to: GPWCPVLQNISRQREAASFQNPA*HPHVTS
Trigger: GCTGGTCACATGGGGGTGCCAGGCGGGATTCTGGAA...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAGGAATCTGGCCCTCCTaGTGGCCAGAGTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRGIWPS*WPECWD
Trigger: GTCCCAGCACTCTGGCCACCAGGAGGGCCAGATTCC...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCATTCTTACCAGGCTATaGCCAAGACATCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPILTRL*PRHQGR
Trigger: GCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAAT...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGGGTGGTTTCAGCAGCTaGTCTCTTCTTGGCTATAGA +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAGGFSS*SLLGYR
Trigger: TCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACC...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCGGAGGTAGGCGAAGCTaGATATGCACGAAGGTTAGG +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPGGRRS*ICTKVR
Trigger: CCTAACCTTCGTGCATATGCAGCTTCGCCTACCTCC...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGTCTGTAATCTTCTGGTaGTTGGGCAGCGAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEASVIFW*LGSELS
Trigger: AGACAACTCGCTGCCCAAGCACCAGAAGATTACAGA...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCGACCACAAAGTGAAATaGAGGTTGCACTTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSDHKVK*RLHFSP
Trigger: AGGCGAGAAGTGCAACCTGCATTTCACTTTGTGGTC...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCTCTCTCCTGGGTGACTaGTATTCTCAACACGTTCCC +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCSLLGD*YSQHVP
Trigger: GGGAACGTGTTGAGAATACCAGTCACCCAGGAGAGA...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAGCCTGAACTCCCACTaGTGGCATCATGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GPWCPVLQNISRQREAASSLNSH*WHHGSG
Trigger: CCCACTCCCATGATGCCACCAGTGGGAGTTCAGGCT...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCGTTACTGCCGCTCATTaGAGGTTTGTAGTCGGATCC +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCVTAAH*RFVVGS
Trigger: GGATCCGACTACAAACCTCCAATGAGCGGCAGTAAC...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAACATGGATGTGCCAATaGGCCATGGGCTGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRTWMCQ*AMGCPG
Trigger: ACCCGGGCAGCCCATGGCCCATTGGCACATCCATGT...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCCGGATTCTGTGGAATTaGCCCTGTCTGAAAGGGACA +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCRILWN*PCLKGT
Trigger: TGTCCCTTTCAGACAGGGCCAATTCCACAGAATCCG...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCTTCCTAGAGTCCCGATaGAGGCTGTCTTCACTGAGT +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCFLESR*RLSSLS
Trigger: ACTCAGTGAAGACAGCCTCCATCGGGACTCTAGGAA...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGCCTACACAGAGGCGCTaGCCAGTCTGCTGGCTCATT +
Preference number: 4 (lower is better)
Translates to: GPWCPVLQNISRQREAASPTQRR*PVCWLI
Trigger: AATGAGCCAGCAGACTGGCCAGCGCCTCTGTGTAGG...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGCCAGGGGAAGGCAGGTaGCCATGCCTGGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEPGEGR*PCLEPA
Trigger: GGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGG...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCCCAGGGGAAGGCAGGTaGCCATGCCTGGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPPGEGR*PCLEPA
Trigger: GGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGG...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCTTCTCGCCTCTTCCCTaGACACAAAATTTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSFSPLP*TQNFGP
Trigger: TGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAA...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAGGGGCTCTGAAGTGTaGAAGAGAGCGCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: GPWCPVLQNISRQREAASRGSEV*KRALDW
Trigger: CCAGTCCAGCGCTCTCTTCCACACTTCAGAGCCCCT...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAAACCTGGGTGCGCAGTaGGTCGGCCCGGGGATTTAT +
Preference number: 4 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRNLGAQ*VGPGIY
Trigger: ATAAATCCCCGGGCCGACCCACTGCGCACCCAGGTT...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS-3UTR TCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCTCTCTTCCCCGAGAGTaGGCGGCAGCGGCGGCGACA +
Preference number: 4 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFSLPRE*AAAAAT
Trigger: TGTCGCCGCCGCTGCCGCTCACTCTCGGGGAAGAGA...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCGGCAACACTACATCCTaGCCAATGACTCTGACTAAG +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCGNTTS*PMTLTK
Trigger: CTTAGTCAGAGTCATTGGTCAGGATGTAGTGTTGCC...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCCTGACCACAATGTTCTaGTTCTCTGGAGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPLTTMF*FSGGVQ
Trigger: CTGGACTCCTCCAGAGAATCAGAACATTGTGGTCAG...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCCCCCGAGGAAGCTGCTaGGCGGCAGCTCAACCAGGA +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPPRGSC*AAAQPG
Trigger: TCCTGGTTGAGCTGCCGCTCAGCAGCTTCCTCGGGG...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
59% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCTTTCCCTCCAGACCCTaGGGCTTTAGGTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPFPSRP*GFRCSE
Trigger: TTCAGAACACCTAAAGCCTCAGGGTCTGGAGGGAAA...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS-3UTR GCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGGCCATCTCCTTCAGTTaGATTGCTGATAACCAGCAT +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAAISFS*IADNQH
Trigger: ATGCTGGTTATCAGCAATGCAACTGAAGGAGATGGC...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR GCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCGGTCCTGGTGATCAGTaGAGCATGTTTGAGACGAAG +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPGPGDQ*SMFETK
Trigger: CTTCGTCTCAAACATGCTGCACTGATCACCAGGACC...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCCATGGTGCCCAGTCCTaGAGAATATCAGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPHGAQS*RISAGK
Trigger: TTTGCCTGCTGATATTCTGCAGGACTGGGCACCATG...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGGATGCTTCCATTCTCTaGAGGCTTCTGGAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEADASIL*RLLEES
Trigger: ACTTTCTTCCAGAAGCCTGCAGAGAATGGAAGCATC...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCTTCATCACTATACTTTaGTGGCCCACCACTTTCCAC +
Preference number: 4 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSFITIL*WPTTFH
Trigger: GTGGAAAGTGGTGGGCCACCAAAGTATAGTGATGAA...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGCTGAACTCCCACTGGTaGCATCATGGGAGTGGGATC +
Preference number: 4 (lower is better)
Translates to: GPWCPVLQNISRQREAASLNSHW*HHGSGI
Trigger: GATCCCACTCCCATGATGCCACCAGTGGGAGTTCAG...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCTGTTTGCTGGGATGTTaGTTTTCCATCGGACGGTGT +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCCLLGC*FSIGRC
Trigger: ACACCGTCCGATGGAAAACCAACATCCCAGCAAACA...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGTTTTCTGGTGAGAGGTaGTACGACGGGTACAAAAGA +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAFSGER*YDGYKR
Trigger: TCTTTTGTACCCGTCGTACCACCTCTCACCAGAAAA...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCTGTGCCAATGGGCCATaGGCTGCCCGGGTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPCANGP*AARVVE
Trigger: CTCTACCACCCGGGCAGCCCATGGCCCATTGGCACA...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTTGTGCCAATGGGCCATaGGCTGCCCGGGTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASCANGP*AARVVE
Trigger: CTCTACCACCCGGGCAGCCCATGGCCCATTGGCACA...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGTTCGAACGGATTCTGTaGAATTGGCCCTGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAFERIL*NWPCLK
Trigger: TTTCAGACAGGGCCAATTCCACAGAATCCGTTCGAA...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTGGAATCTGGCCCTCCTaGTGGCCAGAGTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASGIWPS*WPECWD
Trigger: GTCCCAGCACTCTGGCCACCAGGAGGGCCAGATTCC...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGATAGAACCCTTCATCTaGTTTCACCAGACCCAAAAC +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAIEPFI*FHQTQN
Trigger: GTTTTGGGTCTGGTGAAATCAGATGAAGGGTTCTAT...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTGACATCCCGAGGAGCTaGAGGCAGTGGTCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASDIPRS*RQWSRC
Trigger: ACAACGGGACCACTGCCTTCAGCTCCTCGGGATGTC...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTGTCTCCGTGAGGATCTaGTGCAGGTGTCCGCCACGT +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASVSVRI*CRCPPR
Trigger: ACGTGGCGGACACCTGCATCAGATCCTCACGGAGAC...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCGCAGGTGGCTGCCAGTaGATCATAATACTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCAGGCQ*IIILFE
Trigger: TTCAAAGAGTATTATGATTCACTGGCAGCCACCTGC...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCACGAGCGGGCGTACGTaGAGAGAGCTAGGCACTTCA +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGTSGRT*RELGTS
Trigger: TGAAGTGCCTAGCTCTCTTCACGTACGCCCGCTCGT...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACTCAGAATGGAAGCCTaGACTCCCACTGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRLRMEA*TPTGGI
Trigger: GATGCCACCAGTGGGAGTTCAGGCTTCCATTCTGAG...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGATCTCTGAAGGGGCTCTaGAGTGTGGAAGAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRSLKGL*SVEESA
Trigger: AGCGCTCTCTTCCACACTTCAGAGCCCCTTCAGAGA...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTCTGGCTCCTGGGGACTaGGGCGCGGAGCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVLAPGD*GAEPLL
Trigger: CAGGAGCGGCTCCGCGCCGCAGTCCCCAGGAGCCAG...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR GCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCTTCTGTGTTCTCAAGTaGTGTCCTCTCGTACTCTGT +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCFCVLK*CPLVLC
Trigger: ACAGAGTACGAGAGGACAGCACTTGAGAACACAGAA...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACAGGCAAAGGGAAGCTaGCTCGACACAGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRQAKGS*LDTGFF
Trigger: GAAGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTG...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCAATTTTGGCCCATGGTaGCCAGTCCTGCAGAATATC +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPNFGPW*PVLQNI
Trigger: GATATTCTGCAGGACTGGGCACCATGGGCCAAAATT...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGCCCTCCCACAGGCAGTaGGGCGACAGACACAGGTGT +
Preference number: 4 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEPSHRQ*GDRHRC
Trigger: ACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGG...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCGACCCACTTCACAGTTaGAGTTGGTTTTCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPDPLHS*SWFSSH
Trigger: GTGACTGGAAAACCAACTCCAACTGTGAAGTGGGTC...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCTCAAGGATTATCAGTTaGGCTCCAGCTTGTGCATTT +
Preference number: 4 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSSRIIS*APACAF
Trigger: AAATGCACAAGCTGGAGCCCAACTGATAATCCTTGA...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCACGAAGGTTAGGTGCTaGGCCAGGGAGCTGAACCTC +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGTKVRC*ARELNL
Trigger: GAGGTTCAGCTCCCTGGCCCAGCACCTAACCTTCGT...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCTTGCATTCTTGTACTTaGTGTTTGCTGGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSLHSCT*CLLGCW
Trigger: CCAACATCCCAGCAAACACCAAGTACAAGAATGCAA...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCGAGATGACTGCGAGCTaGAGAAGCGAGGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGEMTAS*RSEAAG
Trigger: TCCAGCAGCCTCGCTTCTCCAGCTCGCAGTCATCTC...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGGCAGTGGGAAGACTCTaGCCTGAATCTTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GPWCPVLQNISRQREAASAVGRL*PESSSW
Trigger: CCAAGAGGAAGATTCAGGCCAGAGTCTTCCCACTGC...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCTTTGGTCAGCTCATCTaGTTCATAGCTACTCTCGGA +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCFGQLI*FIATLG
Trigger: TCCGAGAGTAGCTATGAACCAGATGAGCTGACCAAA...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGACTGAGCATGTTCTTTaGGCAAAAGGTAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEATEHVL*AKGSFW
Trigger: CCAGAAACTACCTTTTGCCCAAAGAACATGCTCAGT...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCAGCAGTCAGGGTTTGTaGGAGGAAATGCCCCAAATA +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPSSQGL*EEMPQI
Trigger: TATTTGGGGCATTTCCTCCCACAAACCCTGACTGCT...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCGAGGTAATGTTGGGATaGCAACATCATGTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSEVMLG*QHHVQG
Trigger: TCCTTGAACATGATGTTGCCATCCCAACATTACCTC...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS-3UTR TCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGGAGCCATGCTTATTTTaGGCCATAACTCTAAAGATG +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAEPCLF*AITLKM
Trigger: CATCTTTAGAGTTATGGCTCAAAATAAGCATGGCTC...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCTCCATCCTTGCTTTCTaGTTTACAGAATGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPSILAF*FTEWGQ
Trigger: CTGACCCCATTCTGTAAATCAGAAAGCAAGGATGGA...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAGTAGGGGAAGATGCCTaGGCGTCAGTCGTGTGTTTT +
Preference number: 4 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRVGEDA*ASVVCF
Trigger: AAAACACACGACTGACGCTCAGGCATCTTCCCCTAC...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCTGCACGAAGGTTAGGTaGTGGGCCAGGGAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPCTKVR*WARELN
Trigger: GTTCAGCTCCCTGGCCCAGCACCTAACCTTCGTGCA...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGCATGAGGGCTGTTACTaGCGCTCATTGGAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: GPWCPVLQNISRQREAASHEGCY*RSLEVC
Trigger: ACAAACCTCCAATGAGCGGCAGTAACAGCCCTCATG...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCTGTTTCCGCTGTCCCTaGCCTTGTTACTTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCCFRCP*PCYLKN
Trigger: ATTTTTCAAGTAACAAGGGCAGGGACAGCGGAAACA...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCCCCTCCCACAGGCAGTaGGGCGACAGACACAGGTGT +
Preference number: 4 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFPSHRQ*GDRHRC
Trigger: ACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGG...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTAATCCCGCCCGACTCTTaGTGGGCCCTGGCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLIPPDS*WALARL
Trigger: GAGCCGCGCCAGGGCCCAGCAAGAGTCGGGCGGGAT...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS-3UTR CCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTACGCAGCCCCTCTCGCTaGAGGGGAGACTCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLRSPSR*RGDSRA
Trigger: CGCCCTGGAGTCTCCCCTCCAGCGAGAGGGGCTGCG...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGGCATTAGGTTTTGAATaGTTACTTGCATCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAALGFE*LLASLL
Trigger: CAGGAGAGATGCAAGTAACCATTCAAAACCTAATGC...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCGCATTAGGTTTTGAATaGTTACTTGCATCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSALGFE*LLASLL
Trigger: CAGGAGAGATGCAAGTAACCATTCAAAACCTAATGC...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCAATGTTCTGATTCTCTaGAGGAGTCCAGCTCACTAC +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPNVLIL*RSPAHY
Trigger: GTAGTGAGCTGGACTCCTCCAGAGAATCAGAACATT...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCTTGCATTCTTGTACTTaGTGTTTGCTGGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCLHSCT*CLLGCW
Trigger: CCAACATCCCAGCAAACACCAAGTACAAGAATGCAA...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCGAACTAATTCAAAGGTaGTCCCATGGGCTGTCATAC +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPELIQR*SHGLSY
Trigger: GTATGACAGCCCATGGGACCACCTTTGAATTAGTTC...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCCTGGAGACTTATCAATaGGTTTCAGCTCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPLETYQ*VSAPVS
Trigger: AGAGACTGGAGCTGAAACCCATTGATAAGTCTCCAG...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCACAGGCTGGGGTGGCTaGGAGTCAAAGGGCATCATC +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPTGWGG*ESKGII
Trigger: GATGATGCCCTTTGACTCCCAGCCACCCCAGCCTGT...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCACATGGATGTGCCAATaGGCCATGGGCTGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPTWMCQ*AMGCPG
Trigger: ACCCGGGCAGCCCATGGCCCATTGGCACATCCATGT...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGGCATGGTGTCAGTGCTaGGGGTATTTCGAACGGATT +
Preference number: 4 (lower is better)
Translates to: GPWCPVLQNISRQREAASAWCQC*GYFERI
Trigger: AATCCGTTCGAAATACCCCCAGCACTGACACCATGC...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCCTTCCTCTTGGGAGCTaGCCAAGTAAGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGLPLGS*PSKRSW
Trigger: CCAGCTCCTCTTACTTGGCCAGCTCCCAAGAGGAAG...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCGGCGAAGCTCTTCAATaGGTGGGAAGGGCGAACATG +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGGEALQ*VGRANM
Trigger: CATGTTCGCCCTTCCCACCCATTGAAGAGCTTCGCC...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCGGAATCTGGCCCTCCTaGTGGCCAGAGTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFGIWPS*WPECWD
Trigger: GTCCCAGCACTCTGGCCACCAGGAGGGCCAGATTCC...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCAGTTTCTGGGGAATCTaGCCCTCCTGGTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPSFWGI*PSWWPE
Trigger: CTCTGGCCACCAGGAGGGCCAGATTCCCCAGAAACT...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAGTTCCCAGCATAAACTaGGGAAGGTTCTGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRVPSIN*GRFWLA
Trigger: AGCCAACCAGAACCTTCCTCAGTTTATGCTGGGAAC...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCACTGTAAGCTCTGCTTaGGCTTCAATTGTCTCATTT +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCTVSSA*ASIVSF
Trigger: AAATGAGACAATTGAAGCTCAAGCAGAGCTTACAGT...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGGACATCCCGAGGAGCTaGAGGCAGTGGTCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGDIPRS*RQWSRC
Trigger: ACAACGGGACCACTGCCTTCAGCTCCTCGGGATGTC...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGGTCTCCGTGAGGATCTaGTGCAGGTGTCCGCCACGT +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGVSVRI*CRCPPR
Trigger: ACGTGGCGGACACCTGCATCAGATCCTCACGGAGAC...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTACGAGCGGGCGTACGTaGAGAGAGCTAGGCACTTCA +
Preference number: 4 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPTSGRT*RELGTS
Trigger: TGAAGTGCCTAGCTCTCTTCACGTACGCCCGCTCGT...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCTCAGAAGTGTCTGTGTaGGGCCTGGTCACAGCACTC +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPSEVSV*GLVTAL
Trigger: GAGTGCTGTGACCAGGCCTCACACAGACACTTCTGA...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTGGGTCCCATGCCCTTTaGGTTCCGTGCCTGGATTTT +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASGSHAL*VPCLDF
Trigger: AAAATCCAGGCACGGAACTCAAAGGGCATGGGACCC...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATGAGGTGGGGCTCCCATaGGGGCTGTTACTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHEVGLP*GLLLPL
Trigger: GAGCGGCAGTAACAGCCCTCATGGGAGCCCCACCTC...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGATGAGAGCCATTCACTaGTTTGCAGGCAGCTCGTTT +
Preference number: 4 (lower is better)
Translates to: GPWCPVLQNISRQREAASMRAIH*FAGSSF
Trigger: AAACGAGCTGCCTGCAAATCAGTGAATGGCTCTCAT...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAAAGACACGGCCTaGCCACAAAGTGAAATGCAG +
Preference number: 4 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRHKDTA*PQSEMQ
Trigger: CTGCATTTCACTTTGTGGTCAGGCCGTGTCTTTGTG...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCGTAGGGGAAGATGCCTaGGCGTCAGTCGTGTGTTTT +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGVGEDA*ASVVCF
Trigger: AAAACACACGACTGACGCTCAGGCATCTTCCCCTAC...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAACAGCCGGTCCCTCGCTaGAAGCTCGGCTCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQQPVPR*KLGSRG
Trigger: GCCGCGGGAGCCGAGCTTGCAGCGAGGGACCGGCTG...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR GCA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGTCTGAATTTCCCCATTaGCAGACACTGGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GPWCPVLQNISRQREAASSEFPH*QTLVFP
Trigger: GGGAAACACCAGTGTCTGGCAATGGGGAAATTCAGA...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCTCTGGGCATGAGGGCTaGCAATGCCATAACCAATGG +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGSGHEG*QCHNQW
Trigger: CCATTGGTTATGGCATTGGCAGCCCTCATGCCCAGA...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTCTGGCATGGTGTCAGTaGTGGGGGTATTTCGAACGG +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASLAWCQ*WGYFER
Trigger: CCGTTCGAAATACCCCCAGCACTGACACCATGCCAG...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGAAATCAAACTCCAGTTaGAACGTAGTGACAATAAGG +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAKSNSS*NVVTIR
Trigger: CCTTATTGTCACTACGTTGCAACTGGAGTTTGATTT...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCCAGGATCAGTTTAAGTaGACTGGTTTTCCAGAATCC +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPQDQFK*TGFPES
Trigger: GGATTCTGGAAAACCAGTGCACTTAAACTGATCCTG...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCTATCACCTCAGGATCTaGAAGAACCTTCAATTCAAC +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCYHLRI*KNLQFN
Trigger: GTTGAATTGAAGGTTCTTCCAGATCCTGAGGTGATA...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCTCTGCCCATTTTGTGTaGCTGGAGCAGGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPSAHFV*LEQVAA
Trigger: GGCAGCCACCTGCTCCAGCCACACAAAATGGGCAGA...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGTCTGCCCATTTTGTGTaGCTGGAGCAGGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGESAHFV*LEQVAA
Trigger: GGCAGCCACCTGCTCCAGCCACACAAAATGGGCAGA...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCAGCCTGAACTCCCACTaGTGGCATCATGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPSLNSH*WHHGSG
Trigger: CCCACTCCCATGATGCCACCAGTGGGAGTTCAGGCT...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAGAGTCTGTAATCTTCTaGTGCTTGGGCAGCGAGTTG +
Preference number: 4 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRESVIF*CLGSEL
Trigger: CAACTCGCTGCCCAAGCACCAGAAGATTACAGACTC...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGTCAAAGGTGGTCCCATaGGCTGTCATACTCCATGTA +
Preference number: 4 (lower is better)
Translates to: GPWCPVLQNISRQREAASSKVVP*AVILHV
Trigger: TACATGGAGTATGACAGCCCATGGGACCACCTTTGA...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTGCACTAATCACAGGCTaGGGTGGCTGGGAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASALITG*GGWESK
Trigger: CTTTGACTCCCAGCCACCCCAGCCTGTGATTAGTGC...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGATGCAGGATCATAGGTaGGAGGTCCTGGAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEMQDHR*EVLEAG
Trigger: TCCCGCCTCCAGGACCTCCCACCTATGATCCTGCAT...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGTTCTCGCCTCTTCCCTaGACACAAAATTTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GPWCPVLQNISRQREAASFSPLP*TQNFGP
Trigger: TGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAA...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTGTGTGGCTGAGCGGCTaGGTTCACCTCAGACAACTC +
Preference number: 4 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPVWLSG*VHLRQL
Trigger: GAGTTGTCTGAGGTGAACCCAGCCGCTCAGCCACAC...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTGCCTGGGGTACCCACTaGTGGTTTCAGCAGCTGATC +
Preference number: 4 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPAWGTH*WFQQLI
Trigger: GATCAGCTGCTGAAACCACCAGTGGGTACCCCAGGC...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCCAAAGGCAGGTGGCCTaGGGTACCCACTGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPQRQVA*GTHWWF
Trigger: AAACCACCAGTGGGTACCCCAGGCCACCTGCCTTTG...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCTGGTGGCCAGAGTGCTaGGACAGCTCTCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPWWPEC*DSSLQD
Trigger: ATCCTGAAGAGAGCTGTCCCAGCACTCTGGCCACCA...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCAGACCTTCAATCAGCTaGGACAGCTGTGTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPRPSIS*DSCVPL
Trigger: AAGCGGGACACAGCTGTCTCAGCTGATTGAAGGTCT...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCGTTTATAGTCCACTTTaGTGGTCTGGGCATGAGGGC +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGVYSPL*WSGHEG
Trigger: GCCCTCATGCCCAGACCATCAAAGTGGACTATAAAC...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGGGGTCCCATGCCCTTTaGGTTCCGTGCCTGGATTTT +
Preference number: 4 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEGSHAL*VPCLDF
Trigger: AAAATCCAGGCACGGAACTCAAAGGGCATGGGACCC...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACTGGTGTGATATCTTaGGAGTTGCGAGGAATTGGA +
Preference number: 4 (lower is better)
Translates to: GPWCPVLQNISRQREAASTGVIS*ELRGIG
Trigger: TCCAATTCCTCGCAACTCTCAAGATATCACACCAGT...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAGTTGTCAACTGGTGTaGTATCTTGAGAGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: GPWCPVLQNISRQREAASSCQLV*YLESCE
Trigger: CTCGCAACTCTCAAGATATCACACCAGTTGACAACT...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCTCAGTGCAGCATGTTTaGGACGAAGAGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPSVQHV*DEEAGM
Trigger: CATGCCAGCCTCTTCGTCTCAAACATGCTGCACTGA...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCGAAGTCAGGTCCTGGTaGAGGTCGTCATGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPEVRSW*RSSCCC
Trigger: ACAACAGCATGACGACCTTCACCAGGACCTGACTTC...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCTTCCAGACTCAGGTTTaGAGTCAGGTCCTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGFQTQV*SQVLVK
Trigger: CTTCACCAGGACCTGACTTCAAACCTGAGTCTGGAA...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGCAGACATGGGTCCCATaGCCTTTGAGTTCCGTGCCT +
Preference number: 4 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEQTWVP*PLSSVP
Trigger: AGGCACGGAACTCAAAGGGCATGGGACCCATGTCTG...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTCTGGAGAAGCGAGGCTaGTGGAGTGGAAATGATGGT +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASLEKRG*WSGNDG
Trigger: ACCATCATTTCCACTCCAGCAGCCTCGCTTCTCCAG...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCCTGGAGAAGCGAGGCTaGTGGAGTGGAAATGATGGT +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPLEKRG*WSGNDG
Trigger: ACCATCATTTCCACTCCAGCAGCCTCGCTTCTCCAG...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCGGTCCTGGTGATCAGTaGAGCATGTTTGAGACGAAG +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGGPGDQ*SMFETK
Trigger: CTTCGTCTCAAACATGCTGCACTGATCACCAGGACC...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAGGGACAGTAATGGTGTaGTTGGCAATGCAGGATCAT +
Preference number: 4 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRGTVMV*LAMQDH
Trigger: ATGATCCTGCATTGCCAAGCACACCATTACTGTCCC...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTATCCTTGTGGTCTCCTaGACTTCAGGGGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPILVVS*TSGALG
Trigger: TCCCAGTGCCCCTGAAGTGCAGGAGACCACAAGGAT...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCACAGCTGGTAGAGGATaGAATGACTCAGAATTAAAA +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCTAGRG*NDSELK
Trigger: TTTTAATTCTGAGTCATTGCATCCTCTACCAGCTGT...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCAAGGGTCTCCATCCTTaGTTTCTGATTTACAGAATG +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPKGLHP*FLIYRM
Trigger: CATTCTGTAAATCAGAAAGCAAGGATGGAGACCCTT...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTGGCAGCAGCAGTTCCTaGATTGCACCTTTCATTGCC +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASGSSSS*IAPFIA
Trigger: GGCAATGAAAGGTGCAATGCAGGAACTGCTGCTGCC...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGCGCAGCCCCTCTCGCTaGAGGGGAGACTCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQRSPSR*RGDSRA
Trigger: CGCCCTGGAGTCTCCCCTCCAGCGAGAGGGGCTGCG...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAGACCCACTTCACAGTTaGAGTTGGTTTTCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRDPLHS*SWFSSH
Trigger: GTGACTGGAAAACCAACTCCAACTGTGAAGTGGGTC...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCACGAAGGTTAGGTGCTaGGCCAGGGAGCTGAACCTC +
Preference number: 4 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFTKVRC*ARELNL
Trigger: GAGGTTCAGCTCCCTGGCCCAGCACCTAACCTTCGT...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAGAGTTGCGAGGAATTaGAGTATCAGTCATGATGGG +
Preference number: 4 (lower is better)
Translates to: GPWCPVLQNISRQREAASRVARN*SISHDG
Trigger: CCCATCATGACTGATACTCCAATTCCTCGCAACTCT...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTGCACTAATCACAGGCTaGGGTGGCTGGGAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPALITG*GGWESK
Trigger: CTTTGACTCCCAGCCACCCCAGCCTGTGATTAGTGC...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCAGGGAATGGATGGGATaGGCACTAATCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPREWMG*ALITGW
Trigger: CCAGCCTGTGATTAGTGCCCATCCCATCCATTCCCT...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCGAGAAGCGAGGCTGCTaGAGTGGAAATGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPEKRGC*SGNDGE
Trigger: CTCACCATCATTTCCACTCCAGCAGCCTCGCTTCTC...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCGCATGGTGTCAGTGCTaGGGGTATTTCGAACGGATT +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGAWCQC*GYFERI
Trigger: AATCCGTTCGAAATACCCCCAGCACTGACACCATGC...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGCTTTCCATACATAATTaGAACAAGCAGTCAAATGTC +
Preference number: 4 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEALSIHN*NKQSNV
Trigger: GACATTTGACTGCTTGTTCCAATTATGTATGGAAAG...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCAAGAGAGCGCTGGACTaGCTGAAGACTGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGKRALD*LKTELE
Trigger: CTCTAGTTCAGTCTTCAGCCAGTCCAGCGCTCTCTT...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGGTGGCATCATGGGAGTaGGATCTGGCACTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEVASWE*DLALCE
Trigger: CTCACACAGTGCCAGATCCCACTCCCATGATGCCAC...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS-3UTR TCA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCAAGAAGGAGGGGGTGCTaGGGAGTCGCCGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: QTSSFLNLQLPQREPIIARRRGC*GVAGLP
Trigger: GGGGAGCCCGGCGACTCCTCAGCACCCCCTCCTTCT...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTAGAAGAGCCTCTAACTaGGAGTGTATCCACCGGCTC +
Preference number: 4 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPRRASN*ECIHRL
Trigger: GAGCCGGTGGATACACTCTCAGTTAGAGGCTCTTCT...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCTGCATCTCTCCTGGGTaGCTGGTATTCTCAACACGT +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPCISPG*LVFSTR
Trigger: ACGTGTTGAGAATACCAGTCACCCAGGAGAGATGCA...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGAGACCTTCAATCAGCTaGGACAGCTGTGTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGERPSIS*DSCVPL
Trigger: AAGCGGGACACAGCTGTCTCAGCTGATTGAAGGTCT...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGCCGGGCCTGTACCATTaGTTGTTAGAGCAGCCACTC +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGPGLYH*LLEQPL
Trigger: GAGTGGCTGCTCTAACAATCAATGGTACAGGCCCGG...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGTCAGAAGTGTCTGTGTaGGGCCTGGTCACAGCACTC +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGSEVSV*GLVTAL
Trigger: GAGTGCTGTGACCAGGCCTCACACAGACACTTCTGA...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCTTTCCCTCCAGACCCTaGGGCTTGATCATTAGGCAT +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPFPSRP*GLIIRH
Trigger: ATGCCTAATGATCAAGCCTCAGGGTCTGGAGGGAAA...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR GCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGGGAGGTAGGCGAAGCTaGATATGCACGAAGGTTAGG +
Preference number: 4 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEGGRRS*ICTKVR
Trigger: CCTAACCTTCGTGCATATGCAGCTTCGCCTACCTCC...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCTCTGGGCATGAGGGCTaGCAATGCCATAACCAATGG +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPSGHEG*QCHNQW
Trigger: CCATTGGTTATGGCATTGGCAGCCCTCATGCCCAGA...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCTGGTGTGCTTGGCAATaGAGGATCATAGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPWCAWQ*RIIGGR
Trigger: CCTCCCACCTATGATCCTGCATTGCCAAGCACACCA...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGCAGGCAAAGGGAAGCTaGCTCGACACAGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGQAKGS*LDTGFF
Trigger: GAAGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTG...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTCATGGTGCCCAGTCCTaGAGAATATCAGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASHGAQS*RISAGK
Trigger: TTTGCCTGCTGATATTCTGCAGGACTGGGCACCATG...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTGGCAGCAGCAGTTCCTaGATTGCACCTTTCATTGCC +
Preference number: 4 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPGSSSS*IAPFIA
Trigger: GGCAATGAAAGGTGCAATGCAGGAACTGCTGCTGCC...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGCCATCCGGGAGAAGCTaGCGTCGATCATCTGATACT +
Preference number: 4 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEPSGRS*RRSSDT
Trigger: AGTATCAGATGATCGACGCCAGCTTCTCCCGGATGG...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGCAAGACTCTCAACAGTaGCCACACACTGATAATAAC +
Preference number: 4 (lower is better)
Translates to: GPWCPVLQNISRQREAASQDSQQ*PHTDNN
Trigger: GTTATTATCAGTGTGTGGCCACTGTTGAGAGTCTTG...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGGCAGTGGTCCCGTTGTaGCTGGTGCATGTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGAVVPL*LVHVQG
Trigger: TCCTTGAACATGCACCAGCCACAACGGGACCACTGC...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCGATCCAGATTTTCAATaGTGTAATAGCGCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCDPDFQ*CNSAVY
Trigger: ATAAACAGCGCTATTACACCATTGAAAATCTGGATC...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTGAGTCTGTAATCTTCTaGTGCTTGGGCAGCGAGTTG +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASESVIF*CLGSEL
Trigger: CAACTCGCTGCCCAAGCACCAGAAGATTACAGACTC...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCCAACAGTCACATCCTTaGGTGGAGAAGTCGGAACTA +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGQQSHP*VEKSEL
Trigger: TAGTTCCGACTTCTCCACCCAAGGATGTGACTGTTG...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGATTTTCTGGTGAGAGGTaGTACGACGGGTACAAAAGA +
Preference number: 4 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRFSGER*YDGYKR
Trigger: TCTTTTGTACCCGTCGTACCACCTCTCACCAGAAAA...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGAGGGAATGGATGGGATaGGCACTAATCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEREWMG*ALITGW
Trigger: CCAGCCTGTGATTAGTGCCCATCCCATCCATTCCCT...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGGAGAAGCGAGGCTGCTaGAGTGGAAATGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEEKRGC*SGNDGE
Trigger: CTCACCATCATTTCCACTCCAGCAGCCTCGCTTCTC...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGCTTCCAACATCCTTGTaGTCTCCTGCACTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGELPTSL*SPALQG
Trigger: CCCCTGAAGTGCAGGAGACCACAAGGATGTTGGAAG...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCGGTGGGCCATCTCTTTaGTCAGCTCATCTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPGGPSL*SAHLVH
Trigger: ATGAACCAGATGAGCTGACCAAAGAGATGGCCCACC...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCTCTGGCTCCTCAGCATaGACATTCTTACCAGGCTAT +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGSGSSA*TFLPGY
Trigger: ATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGA...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGAAGTTCAAAGGCAGGTaGCCTGGGGTACCCACTGGT +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGKFKGR*PGVPTG
Trigger: ACCAGTGGGTACCCCAGGCCACCTGCCTTTGAACTT...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTAATCTGGCCCTCCTGGTaGCCAGAGTGCTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELIWPSW*PECWDS
Trigger: GCTGTCCCAGCACTCTGGCCACCAGGAGGGCCAGAT...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTGCAAAAGGTAGTTTCTaGGGAATCTGGCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPAKGSF*GIWPSW
Trigger: CCAGGAGGGCCAGATTCCCCAGAAACTACCTTTTGC...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CAA 72 bp GGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTaGGCCCATGGTGCCCAGTCCTGCAGAATATCAGCA +
Preference number: 4 (lower is better)
Translates to: GCTSRLFPGHKI*AHGAQSCRISA
Trigger: TGCTGATATTCTGCAGGACTGGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTCCATATCCCCATTTTTaGCCCACTTCACAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASPYPHF*PTSQLE
Trigger: CTCCAACTGTGAAGTGGGTCAAAAATGGGGATATGG...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTAGCACTGGGAACATCTaGCAATGTTCGAACAGCAAC +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASSTGNI*QCSNSN
Trigger: GTTGCTGTTCGAACATTGTCAGATGTTCCCAGTGCT...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCAGCACTGGGAACATCTaGCAATGTTCGAACAGCAAC +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPSTGNI*QCSNSN
Trigger: GTTGCTGTTCGAACATTGTCAGATGTTCCCAGTGCT...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTCTGACCACAATGTTCTaGTTCTCTGGAGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPLTTMF*FSGGVQ
Trigger: CTGGACTCCTCCAGAGAATCAGAACATTGTGGTCAG...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCCAATGGCGTAACCTCTaGCCACAATGTTCTGATTCT +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGQWRNL*PQCSDS
Trigger: AGAATCAGAACATTGTGGTCAGAGGTTACGCCATTG...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCCATACTCCATGTACTTaGTCTTCGACCTTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGHTPCT*SSTFGH
Trigger: GTGACCAAAGGTCGAAGATCAAGTACATGGAGTATG...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCAACTCTTGTATCTGGTaGGTCAGTCTGTTTCCCACA +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGNSCIW*VSLFPT
Trigger: TGTGGGAAACAGACTGACTCACCAGATACAAGAGTT...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGGCTTCCATGTGTGGCTaGGCGGCTGGGTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLASMCG*AAGFTS
Trigger: TGAGGTGAACCCAGCCGCTCAGCCACACATGGAAGC...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAAGCCATTCACTGATTTaGAGGCAGCTCGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRSHSLI*RQLVSF
Trigger: AAAAGAAACGAGCTGCCTGCAAATCAGTGAATGGCT...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAGCCTTTGATGGATATTaGTGTCCATGGAGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRAFDGY*CPWSCQ
Trigger: TTGACAACTCCATGGACAGCAATATCCATCAAAGGC...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGCAATGGGCCATGGGCTaGCCGGGTGGTAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLQWAMG*PGGRDD
Trigger: GTCATCTCTACCACCCGGGCAGCCCATGGCCCATTG...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTACAATGGGCCATGGGCTaGCCGGGTGGTAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELQWAMG*PGGRDD
Trigger: GTCATCTCTACCACCCGGGCAGCCCATGGCCCATTG...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTTCCTGGAGGCGGGATTaGTGGCACGGCGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVSWRRD*WHGEAL
Trigger: AAGAGCTTCGCCGTGCCAGCAATCCCGCCTCCAGGA...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCTGGTGTGCTTGGCAATaGAGGATCATAGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFWCAWQ*RIIGGR
Trigger: CCTCCCACCTATGATCCTGCATTGCCAAGCACACCA...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTAATTTTGGCCCATGGTaGCCAGTCCTGCAGAATATC +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASNFGPW*PVLQNI
Trigger: GATATTCTGCAGGACTGGGCACCATGGGCCAAAATT...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATAGCCTCAGGGGGCACTaGAGCTCTGCCTTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHSLRGH*SSALSH
Trigger: ATGAGACAAGGCAGAGCTGCAGTGCCCCCTGAGGCT...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGGGCAGCAGCAGTTCCTaGATTGCACCTTTCATTGCC +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGGSSSS*IAPFIA
Trigger: GGCAATGAAAGGTGCAATGCAGGAACTGCTGCTGCC...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATTCCTGGTGGCCAGAGTaGTGGGACAGCTCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHSWWPE*WDSSLQ
Trigger: CTGAAGAGAGCTGTCCCAGCACTCTGGCCACCAGGA...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCGAGGAAGGTTCTGGTTaGCTGGTAAATCTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGEEGSG*LVNLGR
Trigger: TCTTCCAAGATTTACCAGCCAACCAGAACCTTCCTC...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCTGTGGCTGGAGCAGGTaGCTGCCAGTGAATCATAAT +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPCGWSR*LPVNHN
Trigger: ATTATGATTCACTGGCAGCCACCTGCTCCAGCCACA...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTATGTCCAGAGGAGAGGTaGGGCTCCCATGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLCPEER*GSHEGC
Trigger: ACAGCCCTCATGGGAGCCCCACCTCTCCTCTGGACA...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCGAGGTTTCACATCTTTaGAATTCCCTTTGTACTTAT +
Preference number: 4 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPEVSHL*NSLCTY
Trigger: ATAAGTACAAAGGGAATTCCAAAGATGTGAAACCTC...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCAGAGTTGCGAGGAATTaGAGTATCAGTCATGATGGG +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGRVARN*SISHDG
Trigger: CCCATCATGACTGATACTCCAATTCCTCGCAACTCT...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATTGGAGGCGGGATTGCTaGCACGGCGAAGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHWRRDC*HGEALQ
Trigger: TTGAAGAGCTTCGCCGTGCCAGCAATCCCGCCTCCA...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTATAGGTGGGAGGTCCTaGAGGCGGGATTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVIGGRS*RRDCWH
Trigger: GTGCCAGCAATCCCGCCTCCAGGACCTCCCACCTAT...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGATAGGTGGGAGGTCCTaGAGGCGGGATTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLIGGRS*RRDCWH
Trigger: GTGCCAGCAATCCCGCCTCCAGGACCTCCCACCTAT...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCCTTCCAACATCCTTGTaGTCTCCTGCACTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFLPTSL*SPALQG
Trigger: CCCCTGAAGTGCAGGAGACCACAAGGATGTTGGAAG...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTATTAGTCCTTCCAGGTaGGCCATCTCTTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPISPSR*AISLVS
Trigger: GCTGACCAAAGAGATGGCCCACCTGGAAGGACTAAT...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTAAGAGAGCGCTGGACTaGCTGAAGACTGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPKRALD*LKTELE
Trigger: CTCTAGTTCAGTCTTCAGCCAGTCCAGCGCTCTCTT...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTTATGTGCAAAGGCAATaGCTTCCATGTGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASYVQRQ*LPCVAE
Trigger: CTCAGCCACACATGGAAGCCATTGCCTTTGCACATA...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGCTCCGGGAGGAAACCTaGGTGCGCAGTGGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMLREET*VRSGSA
Trigger: GGCCGACCCACTGCGCACCCAGGTTTCCTCCCGGAG...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS-3UTR CCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTCACTGGTCAGTGAAGTaGGAGGTAATGTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPHWSVK*EVMLGW
Trigger: CCATCCCAACATTACCTCCCACTTCACTGACCAGTG...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS-3UTR CCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATGCAGTGGTCCCGTTGTaGCTGGTGCTAGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHAVVPL*LVLDGQ
Trigger: CTGACCATCTAGCACCAGCCACAACGGGACCACTGC...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS-3UTR TCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGGTTCCCAGCATAAACTaGGGAAGGTTCTGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGVPSIN*GRFWLA
Trigger: AGCCAACCAGAACCTTCCTCAGTTTATGCTGGGAAC...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCTGCATCTCTCCTGGGTaGCTGGTATTCTCAACACGT +
Preference number: 4 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFCISPG*LVFSTR
Trigger: ACGTGTTGAGAATACCAGTCACCCAGGAGAGATGCA...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTGCTGGGCCAGGGAGCTaGACCTCAGGTTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLAGPGS*TSGCVS
Trigger: AGAAACACAACCTGAGGTTCAGCTCCCTGGCCCAGC...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTACGAGCGGGCGTACGTaGAGAGAGCTAGGCACTTCA +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLTSGRT*RELGTS
Trigger: TGAAGTGCCTAGCTCTCTTCACGTACGCCCGCTCGT...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGCTGACCACAATGTTCTaGTTCTCTGGAGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGLTTMF*FSGGVQ
Trigger: CTGGACTCCTCCAGAGAATCAGAACATTGTGGTCAG...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCCAATGGCGTAACCTCTaGCCACAATGTTCTGATTCT +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPQWRNL*PQCSDS
Trigger: AGAATCAGAACATTGTGGTCAGAGGTTACGCCATTG...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGGTTTATAGTCCACTTTaGTGGTCTGGGCATGAGGGC +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGVYSPL*WSGHEG
Trigger: GCCCTCATGCCCAGACCATCAAAGTGGACTATAAAC...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCAACTCTTGTATCTGGTaGGTCAGTCTGTTTCCCACA +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPNSCIW*VSLFPT
Trigger: TGTGGGAAACAGACTGACTCACCAGATACAAGAGTT...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCATGAGAGCCATTCACTaGTTTGCAGGCAGCTCGTTT +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPMRAIH*FAGSSF
Trigger: AAACGAGCTGCCTGCAAATCAGTGAATGGCTCTCAT...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCAGCTCCAGTCTCTCATaGTGGATCCAGAGATCTGGA +
Preference number: 4 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFSSSLS*WIQRSG
Trigger: TCCAGATCTCTGGATCCATCATGAGAGACTGGAGCT...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTACTGGTGTGATATCTTaGGAGTTGCGAGGAATTGGA +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASTGVIS*ELRGIG
Trigger: TCCAATTCCTCGCAACTCTCAAGATATCACACCAGT...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCAGTTGTCAACTGGTGTaGTATCTTGAGAGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPSCQLV*YLESCE
Trigger: CTCGCAACTCTCAAGATATCACACCAGTTGACAACT...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCACCCCGAGGAAGCTGCTaGGCGGCAGCTCAACCAGGA +
Preference number: 4 (lower is better)
Translates to: QTSSFLNLQLPQREPIIAPRGSC*AAAQPG
Trigger: TCCTGGTTGAGCTGCCGCTCAGCAGCTTCCTCGGGG...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCTTGCACTGTAAGCTCTaGTTGAGCTTCAATTGTCTC +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGLHCKL*LSFNCL
Trigger: GAGACAATTGAAGCTCAAGCAGAGCTTACAGTGCAA...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCTTGGGCTCCAGCTTGTaGATTTCCAACATCATTTTC +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGLGSSL*ISNIIF
Trigger: GAAAATGATGTTGGAAATGCACAAGCTGGAGCCCAA...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGCAAAGTGGTTGCATTTaGATTCTTGTACTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: GPWCPVLQNISRQREAASQSGCI*ILVLGV
Trigger: AACACCAAGTACAAGAATGCAAATGCAACCACTTTG...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATATCCTTGTGGTCTCCTaGACTTCAGGGGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHILVVS*TSGALG
Trigger: TCCCAGTGCCCCTGAAGTGCAGGAGACCACAAGGAT...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCGACCACAAAGTGAAATaGAGGTTGCACTTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPDHKVK*RLHFSP
Trigger: AGGCGAGAAGTGCAACCTGCATTTCACTTTGTGGTC...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTAGCCTCAGGGGGCACTaGAGCTCTGCCTTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLSLRGH*SSALSH
Trigger: ATGAGACAAGGCAGAGCTGCAGTGCCCCCTGAGGCT...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTAGGGAGTAGGGGAAGATaGCTGAGCGTCAGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELGSRGR*LSVSRV
Trigger: CACACGACTGACGCTCAGGCATCTTCCCCTACTCCC...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCATTTACTGTCTACACTaGCTTCCACGCTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPIYCLH*LPRCLL
Trigger: CAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAAT...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTTCCTGGTGGCCAGAGTaGTGGGACAGCTCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVSWWPE*WDSSLQ
Trigger: CTGAAGAGAGCTGTCCCAGCACTCTGGCCACCAGGA...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTCCCTCCCACAGGCAGTaGGGCGACAGACACAGGTGT +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFPSHRQ*GDRHRC
Trigger: ACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGG...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCCTTCACAGTTGGAGTTaGTTTTCCAGTCACTTCACA +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGLHSWS*FSSHFT
Trigger: TGTGAAGTGACTGGAAAACCAACTCCAACTGTGAAG...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCTCTCTCCTGGGTGACTaGTATTCTCAACACGTTCCC +
Preference number: 4 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFSLLGD*YSQHVP
Trigger: GGGAACGTGTTGAGAATACCAGTCACCCAGGAGAGA...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGTCGAACAGCAACATCTaGTGTGGAAACTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGSNSNI*CGNSRT
Trigger: GGTCCTGGAGTTTCCACACCAGATGTTGCTGTTCGA...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCTCTGAGGAGCAGCACTaGGAACATCTGACAATGTTC +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPSEEQH*EHLTMF
Trigger: GAACATTGTCAGATGTTCCCAGTGCTGCTCCTCAGA...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTACCCATTTTGTGTGGCTaGAGCAGGTGGCTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLPILCG*SRWLPV
Trigger: CACTGGCAGCCACCTGCTCCAGCCACACAAAATGGG...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTATCTGCCCATTTTGTGTaGCTGGAGCAGGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLSAHFV*LEQVAA
Trigger: GGCAGCCACCTGCTCCAGCCACACAAAATGGGCAGA...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCCTGAACTCCCACTaGTGGCATCATGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLSLNSH*WHHGSG
Trigger: CCCACTCCCATGATGCCACCAGTGGGAGTTCAGGCT...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGATTGATCTTCGACCTTTaGTCACCATCACAGAGAATT +
Preference number: 4 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRLIFDL*SPSQRI
Trigger: AATTCTCTGTGATGGTGACCAAAGGTCGAAGATCAA...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCGAACTAATTCAAAGGTaGTCCCATGGGCTGTCATAC +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPELIQR*SHGLSY
Trigger: GTATGACAGCCCATGGGACCACCTTTGAATTAGTTC...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTGATGGGGTTTGGGTCTaGAGACTTATCAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASDGVWV*RLINGF
Trigger: AAACCCATTGATAAGTCTCCAGACCCAAACCCCATC...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGACAGGCTGGGGTGGCTaGGAGTCAAAGGGCATCATC +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLTGWGG*ESKGII
Trigger: GATGATGCCCTTTGACTCCCAGCCACCCCAGCCTGT...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGTGTGCCAATGGGCCATaGGCTGCCCGGGTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQCANGP*AARVVE
Trigger: CTCTACCACCCGGGCAGCCCATGGCCCATTGGCACA...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTTTCGAACGGATTCTGTaGAATTGGCCCTGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASFERIL*NWPCLK
Trigger: TTTCAGACAGGGCCAATTCCACAGAATCCGTTCGAA...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCGCATGGTGTCAGTGCTaGGGGTATTTCGAACGGATT +
Preference number: 4 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFAWCQC*GYFERI
Trigger: AATCCGTTCGAAATACCCCCAGCACTGACACCATGC...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATGGCGAACATGGGCAGTaGGAAGACTCTGGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHGEHGQ*EDSGLN
Trigger: ATTCAGGCCAGAGTCTTCCCACTGCCCATGTTCGCC...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTATGGGAAGGGCGAACATaGGCAGTGGGAAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELWEGRT*AVGRLW
Trigger: CCAGAGTCTTCCCACTGCCCATGTTCGCCCTTCCCA...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTATGGGAAGGGCGAACATaGGCAGTGGGAAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLWEGRT*AVGRLW
Trigger: CCAGAGTCTTCCCACTGCCCATGTTCGCCCTTCCCA...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTATGCAGGATCATAGGTaGGAGGTCCTGGAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLMQDHR*EVLEAG
Trigger: TCCCGCCTCCAGGACCTCCCACCTATGATCCTGCAT...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTTGGTTCAGAGCTTGCTaGGACAGTAATGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPWFRAC*DSNGVL
Trigger: AAGCACACCATTACTGTCCCAGCAAGCTCTGAACCA...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTAACTGGGAACAACCACTaGCATAGGAGGCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELTGNNH*HRRPAP
Trigger: AGGAGCCGGCCTCCTATGCCAGTGGTTGTTCCCAGT...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAACCAGGGGAAGGCAGGTaGCCATGCCTGGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFEPGEGR*PCLEPA
Trigger: GGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGG...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGAAGAGAGCGCTGGACTaGCTGAAGACTGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGKRALD*LKTELE
Trigger: CTCTAGTTCAGTCTTCAGCCAGTCCAGCGCTCTCTT...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTAAGGGGCTCTGAAGTGTaGAAGAGAGCGCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLRGSEV*KRALDW
Trigger: CCAGTCCAGCGCTCTCTTCCACACTTCAGAGCCCCT...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCTATGTGCAAAGGCAATaGCTTCCATGTGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPYVQRQ*LPCVAE
Trigger: CTCAGCCACACATGGAAGCCATTGCCTTTGCACATA...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTCAAAGGCAGGTGGCCTaGGGTACCCACTGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVQRQVA*GTHWWF
Trigger: AAACCACCAGTGGGTACCCCAGGCCACCTGCCTTTG...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGGTCTCCGTGAGGATCTaGTGCAGGTGTCCGCCACGT +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQVSVRI*CRCPPR
Trigger: ACGTGGCGGACACCTGCATCAGATCCTCACGGAGAC...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGCCGGGCCTGTACCATTaGTTGTTAGAGCAGCCACTC +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLPGLYH*LLEQPL
Trigger: GAGTGGCTGCTCTAACAATCAATGGTACAGGCCCGG...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGCATACTCCATGTACTTaGTCTTCGACCTTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEHTPCT*SSTFGH
Trigger: GTGACCAAAGGTCGAAGATCAAGTACATGGAGTATG...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCTCCGTGCCTGGATTTTaGAGTAGTATGGTGTGTCAA +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPSVPGF*SSMVCQ
Trigger: TTGACACACCATACTACTTCAAAATCCAGGCACGGA...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTGGAATTGGCCCTGTCTaGAAGGGACATGGATGTGCC +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLGIGPV*KGHGCA
Trigger: GGCACATCCATGTCCCTTTCAGACAGGGCCAATTCC...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTATCTCTGAAGGGGCTCTaGAGTGTGGAAGAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLSLKGL*SVEESA
Trigger: AGCGCTCTCTTCCACACTTCAGAGCCCCTTCAGAGA...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTCAGGTACCAAGGCCCTaGGGTAACAGAAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLQVPRP*GNRSSQ
Trigger: CTGACTGCTTCTGTTACCTCAGGGCCTTGGTACCTG...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATGGAGGTAGGCGAAGCTaGATATGCACGAAGGTTAGG +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHGGRRS*ICTKVR
Trigger: CCTAACCTTCGTGCATATGCAGCTTCGCCTACCTCC...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCAGCCATTCACTGATTTaGAGGCAGCTCGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPSHSLI*RQLVSF
Trigger: AAAAGAAACGAGCTGCCTGCAAATCAGTGAATGGCT...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTGGAGAAGCGAGGCTaGTGGAGTGGAAATGATGGT +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHLEKRG*WSGNDG
Trigger: ACCATCATTTCCACTCCAGCAGCCTCGCTTCTCCAG...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAACAATGGGCCATGGGCTaGCCGGGTGGTAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQQWAMG*PGGRDD
Trigger: GTCATCTCTACCACCCGGGCAGCCCATGGCCCATTG...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTACTGGCATGGTGTCAGTaGTGGGGGTATTTCGAACGG +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELLAWCQ*WGYFER
Trigger: CCGTTCGAAATACCCCCAGCACTGACACCATGCCAG...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGGCGCTGGCCAGTCTaGTGGCTCATTCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLRRWPV*WLILCS
Trigger: AGAACACAGAATGAGCCAGCAGACTGGCCAGCGCCT...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTAAGGCGCTGGCCAGTCTaGTGGCTCATTCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELRRWPV*WLILCS
Trigger: AGAACACAGAATGAGCCAGCAGACTGGCCAGCGCCT...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTCAGGATCAGTTTAAGTaGACTGGTTTTCCAGAATCC +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASQDQFK*TGFPES
Trigger: GGATTCTGGAAAACCAGTGCACTTAAACTGATCCTG...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCTTCATCACTATACTTTaGTGGCCCACCACTTTCCAC +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPFITIL*WPTTFH
Trigger: GTGGAAAGTGGTGGGCCACCAAAGTATAGTGATGAA...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCCTTCACAGTTGGAGTTaGTTTTCCAGTCACTTCACA +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPLHSWS*FSSHFT
Trigger: TGTGAAGTGACTGGAAAACCAACTCCAACTGTGAAG...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTTACTTGCATCTCTCCTaGGTGACTGGTATTCTCAAC +
Preference number: 4 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPYLHLS*VTGILN
Trigger: GTTGAGAATACCAGTCACCCAGGAGAGATGCAAGTA...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTAGTGGGATCTGGCACTaGAGTGTATGGAGCATTAAT +
Preference number: 4 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPSGIWH*SVWSIN
Trigger: ATTAATGCTCCATACACTCCAGTGCCAGATCCCACT...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTCTGAACTCCCACTGGTaGCATCATGGGAGTGGGATC +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVLNSHW*HHGSGI
Trigger: GATCCCACTCCCATGATGCCACCAGTGGGAGTTCAG...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCTTGATCTTCGACCTTTaGTCACCATCACAGAGAATT +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGLIFDL*SPSQRI
Trigger: AATTCTCTGTGATGGTGACCAAAGGTCGAAGATCAA...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAATGTCCAGAGGAGAGGTaGGGCTCCCATGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQCPEER*GSHEGC
Trigger: ACAGCCCTCATGGGAGCCCCACCTCTCCTCTGGACA...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCTTTTCTGGTGAGAGGTaGTACGACGGGTACAAAAGA +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPFSGER*YDGYKR
Trigger: TCTTTTGTACCCGTCGTACCACCTCTCACCAGAAAA...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTATGGATCCAGAGATCTaGAGGTTTCACATCTTTGGA +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASMDPEI*RFHIFG
Trigger: TCCAAAGATGTGAAACCTCCAGATCTCTGGATCCAT...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTACGAAGAGGCTGGCATaGTGTCAGTGCTGGGGGTAT +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLTKRLA*CQCWGY
Trigger: ATACCCCCAGCACTGACACCATGCCAGCCTCTTCGT...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGCTTCCTCTTGGGAGCTaGCCAAGTAAGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLLPLGS*PSKRSW
Trigger: CCAGCTCCTCTTACTTGGCCAGCTCCCAAGAGGAAG...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTCTTCCTCTTGGGAGCTaGCCAAGTAAGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVLPLGS*PSKRSW
Trigger: CCAGCTCCTCTTACTTGGCCAGCTCCCAAGAGGAAG...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTAGGCGAAGCTCTTCAATaGGTGGGAAGGGCGAACATG +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELGEALQ*VGRANM
Trigger: CATGTTCGCCCTTCCCACCCATTGAAGAGCTTCGCC...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTGGCGAAGCTCTTCAATaGGTGGGAAGGGCGAACATG +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVGEALQ*VGRANM
Trigger: CATGTTCGCCCTTCCCACCCATTGAAGAGCTTCGCC...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTCACCAAGGACTTCCTTaGTTTTGGATGGCGTTTTTG +
Preference number: 4 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPHQGLP*FWMAFL
Trigger: CAAAAACGCCATCCAAAACCAAGGAAGTCCTTGGTG...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTTTCCAGAATCCCGCCTaGCACCCCCATGTGACCAGC +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFFQNPA*HPHVTS
Trigger: GCTGGTCACATGGGGGTGCCAGGCGGGATTCTGGAA...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCATAGAACCCTTCATCTaGTTTCACCAGACCCAAAAC +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPIEPFI*FHQTQN
Trigger: GTTTTGGGTCTGGTGAAATCAGATGAAGGGTTCTAT...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCGAGCCATGCTTATTTTaGGCCATAACTCTAAAGATG +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPEPCLF*AITLKM
Trigger: CATCTTTAGAGTTATGGCTCAAAATAAGCATGGCTC...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAGCTGGGCCAGGGAGCTaGACCTCAGGTTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQAGPGS*TSGCVS
Trigger: AGAAACACAACCTGAGGTTCAGCTCCCTGGCCCAGC...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGTCCGTGCCTGGATTTTaGAGTAGTATGGTGTGTCAA +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGSVPGF*SSMVCQ
Trigger: TTGACACACCATACTACTTCAAAATCCAGGCACGGA...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTTTCCCTTTGTACTTATaGGAGCCATTCACTGATTTG +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASFPLYL*EPFTDL
Trigger: CAAATCAGTGAATGGCTCTCATAAGTACAAAGGGAA...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCTATGAATTTCGCCTTTaGTGGATATTGCTGTCCATG +
Preference number: 4 (lower is better)
Translates to: QVALLASSLDTKFWPMVPYEFRL*WILLSM
Trigger: CATGGACAGCAATATCCATCAAAGGCGAAATTCATA...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTCACCCGCCCCAATACTaGAACTGCACAGAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVHPPQY*NCTESN
Trigger: GTTGCTTTCTGTGCAGTTTCAGTATTGGGGCGGGTG...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTATTCTTACCAGGCTATaGCCAAGACATCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVILTRL*PRHQGR
Trigger: GCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAAT...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCAAATGCCCCAAATACTaGGCATGTTCTTTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPKCPKY*ACSLGK
Trigger: TTTGCCCAAAGAACATGCTCAGTATTTGGGGCATTT...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCTTGCACTGTAAGCTCTaGTTGAGCTTCAATTGTCTC +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPLHCKL*LSFNCL
Trigger: GAGACAATTGAAGCTCAAGCAGAGCTTACAGTGCAA...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAATGCACGAAGGTTAGGTaGTGGGCCAGGGAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQCTKVR*WARELN
Trigger: GTTCAGCTCCCTGGCCCAGCACCTAACCTTCGTGCA...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTAGGCGAAGCTGCATATaGACGAAGGTTAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLRRSCI*TKVRCW
Trigger: CCAGCACCTAACCTTCGTGCATATGCAGCTTCGCCT...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTTCTGGGCATGAGGGCTaGCAATGCCATAACCAATGG +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLSGHEG*QCHNQW
Trigger: CCATTGGTTATGGCATTGGCAGCCCTCATGCCCAGA...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCCAAAGTGGTTGCATTTaGATTCTTGTACTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGQSGCI*ILVLGV
Trigger: AACACCAAGTACAAGAATGCAAATGCAACCACTTTG...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCGCCTTTGATGGATATTaGTGTCCATGGAGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPAFDGY*CPWSCQ
Trigger: TTGACAACTCCATGGACAGCAATATCCATCAAAGGC...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTAAGGGTCTCCATCCTTaGTTTCTGATTTACAGAATG +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASKGLHP*FLIYRM
Trigger: CATTCTGTAAATCAGAAAGCAAGGATGGAGACCCTT...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTAACCCAAGAACTATGTaGAAAGGCAATGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPNPRTM*KGNGFH
Trigger: ATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTT...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCCAAGACTCTCAACAGTaGCCACACACTGATAATAAC +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPQDSQQ*PHTDNN
Trigger: GTTATTATCAGTGTGTGGCCACTGTTGAGAGTCTTG...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAACCCATTTTGTGTGGCTaGAGCAGGTGGCTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQPILCG*SRWLPV
Trigger: CACTGGCAGCCACCTGCTCCAGCCACACAAAATGGG...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCTTAGGTGTTCTGAATTaGACAGCTTCAGACATGGGT +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPLGVLN*TASDMG
Trigger: ACCCATGTCTGAAGCTGTCCAATTCAGAACACCTAA...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCCTGGAGACTTATCAATaGGTTTCAGCTCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFLETYQ*VSAPVS
Trigger: AGAGACTGGAGCTGAAACCCATTGATAAGTCTCCAG...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGAGAGTTGCGAGGAATTaGAGTATCAGTCATGATGGG +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGRVARN*SISHDG
Trigger: CCCATCATGACTGATACTCCAATTCCTCGCAACTCT...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTAAGGGAATGGATGGGATaGGCACTAATCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELREWMG*ALITGW
Trigger: CCAGCCTGTGATTAGTGCCCATCCCATCCATTCCCT...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAAGCTCTTCAATGGGTaGGAAGGGCGAACATGGGCA +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLKLFNG*EGRTWA
Trigger: TGCCCATGTTCGCCCTTCCCACCCATTGAAGAGCTT...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGTGGAGGCGGGATTGCTaGCACGGCGAAGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQWRRDC*HGEALQ
Trigger: TTGAAGAGCTTCGCCGTGCCAGCAATCCCGCCTCCA...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTACTTCCAACATCCTTGTaGTCTCCTGCACTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELLPTSL*SPALQG
Trigger: CCCCTGAAGTGCAGGAGACCACAAGGATGTTGGAAG...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATGGTGGGCCATCTCTTTaGTCAGCTCATCTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHGGPSL*SAHLVH
Trigger: ATGAACCAGATGAGCTGACCAAAGAGATGGCCCACC...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTGTGTGGCTGAGCGGCTaGGTTCACCTCAGACAACTC +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFVWLSG*VHLRQL
Trigger: GAGTTGTCTGAGGTGAACCCAGCCGCTCAGCCACAC...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTGCCTGGGGTACCCACTaGTGGTTTCAGCAGCTGATC +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFAWGTH*WFQQLI
Trigger: GATCAGCTGCTGAAACCACCAGTGGGTACCCCAGGC...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAACAAAGGCAGGTGGCCTaGGGTACCCACTGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQQRQVA*GTHWWF
Trigger: AAACCACCAGTGGGTACCCCAGGCCACCTGCCTTTG...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTGCAAAAGGTAGTTTCTaGGGAATCTGGCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLAKGSF*GIWPSW
Trigger: CCAGGAGGGCCAGATTCCCCAGAAACTACCTTTTGC...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGTGCACAGTCCGGGCCTaGAGCCTCTATATAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQCTVRA*SLYIGP
Trigger: AGGCCCTATATAGAGGCTCCAGGCCCGGACTGTGCA...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS-3UTR CCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTGCACTGTGTGAGGCCTaGTCACAGCACTCTCATACA +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVALCEA*SQHSHT
Trigger: TGTATGAGAGTGCTGTGACCAGGCCTCACACAGTGC...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS-3UTR TCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTATGGAGTAGGAAGTCCTaGAGCAACACATGGCAACAC +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLWSRKS*SNTWQH
Trigger: GTGTTGCCATGTGTTGCTTCAGGACTTCCTACTCCA...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTTGGAGTAGGAAGTCCTaGAGCAACACATGGCAACAC +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVWSRKS*SNTWQH
Trigger: GTGTTGCCATGTGTTGCTTCAGGACTTCCTACTCCA...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCACTGTAAGCTCTGCTTaGGCTTCAATTGTCTCATTT +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPTVSSA*ASIVSF
Trigger: AAATGAGACAATTGAAGCTCAAGCAGAGCTTACAGT...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTACTGTAAGCTCTGCTTaGGCTTCAATTGTCTCATTT +
Preference number: 4 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPTVSSA*ASIVSF
Trigger: AAATGAGACAATTGAAGCTCAAGCAGAGCTTACAGT...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTACCAGACCCAAAACTTaGAGATTATGTTCCTTTACA +
Preference number: 4 (lower is better)
Translates to: PVLQNISRQREAASTQASTRPKT*RLCSFT
Trigger: TGTAAAGGAACATAATCTTCAAGTTTTGGGTCTGGT...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGTGCATCTCTCCTGGGTaGCTGGTATTCTCAACACGT +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLCISPG*LVFSTR
Trigger: ACGTGTTGAGAATACCAGTCACCCAGGAGAGATGCA...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTTTACCAAGGTCTCAGTaGCATCACTCTTTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVLPRSQ*HHSFGR
Trigger: CCTCCCGAAAGAGTGATGTCACTGAGACCTTGGTAA...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAACTCAGAATGGAAGCCTaGACTCCCACTGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQLRMEA*TPTGGI
Trigger: GATGCCACCAGTGGGAGTTCAGGCTTCCATTCTGAG...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTATTTCCCTCCAGACCCTaGGGCTTGATCATTAGGCAT +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLFPSRP*GLIIRH
Trigger: ATGCCTAATGATCAAGCCTCAGGGTCTGGAGGGAAA...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTAAGCTCCAGTCTCTCATaGTGGATCCAGAGATCTGGA +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLSSSLS*WIQRSG
Trigger: TCCAGATCTCTGGATCCATCATGAGAGACTGGAGCT...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTATTGGAGTATCAGTCATaGTGGGGTTTGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELLEYQS*WGLGLE
Trigger: CTCCAGACCCAAACCCCATCATGACTGATACTCCAA...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTTTGGAGTATCAGTCATaGTGGGGTTTGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLLEYQS*WGLGLE
Trigger: CTCCAGACCCAAACCCCATCATGACTGATACTCCAA...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCTATGAATTTCGCCTTTaGTGGATATTGCTGTCCATG +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPYEFRL*WILLSM
Trigger: CATGGACAGCAATATCCATCAAAGGCGAAATTCATA...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTGGAATTGGCCCTGTCTaGAAGGGACATGGATGTGCC +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFGIGPV*KGHGCA
Trigger: GGCACATCCATGTCCCTTTCAGACAGGGCCAATTCC...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTATTCCAGACTCAGGTTTaGAGTCAGGTCCTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELFQTQV*SQVLVK
Trigger: CTTCACCAGGACCTGACTTCAAACCTGAGTCTGGAA...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGCACAAAGACACGGCCTaGCCACAAAGTGAAATGCAG +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLHKDTA*PQSEMQ
Trigger: CTGCATTTCACTTTGTGGTCAGGCCGTGTCTTTGTG...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATGGTGGTTTCAGCAGCTaGTCTCTTCTTGGCTATAGA +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHGGFSS*SLLGYR
Trigger: TCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACC...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGTTGCACTGTAAGCTCTaGTTGAGCTTCAATTGTCTC +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGLHCKL*LSFNCL
Trigger: GAGACAATTGAAGCTCAAGCAGAGCTTACAGTGCAA...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGTTGGGCTCCAGCTTGTaGATTTCCAACATCATTTTC +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGLGSSL*ISNIIF
Trigger: GAAAATGATGTTGGAAATGCACAAGCTGGAGCCCAA...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTACATGAGGGCTGTTACTaGCGCTCATTGGAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELHEGCY*RSLEVC
Trigger: ACAAACCTCCAATGAGCGGCAGTAACAGCCCTCATG...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCGCCTTTGATGGATATTaGTGTCCATGGAGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFAFDGY*CPWSCQ
Trigger: TTGACAACTCCATGGACAGCAATATCCATCAAAGGC...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGGCGCTGGCCAGTCTaGTGGCTCATTCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQRRWPV*WLILCS
Trigger: AGAACACAGAATGAGCCAGCAGACTGGCCAGCGCCT...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTCATGGTGCCCAGTCCTaGAGAATATCAGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLHGAQS*RISAGK
Trigger: TTTGCCTGCTGATATTCTGCAGGACTGGGCACCATG...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCAAGGGTCTCCATCCTTaGTTTCTGATTTACAGAATG +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPKGLHP*FLIYRM
Trigger: CATTCTGTAAATCAGAAAGCAAGGATGGAGACCCTT...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTAGCCCGGGGATTTATGTaGTCGCCAAAAACAATAGCG +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELARGFM*SPKTIA
Trigger: CGCTATTGTTTTTGGCGAGCACATAAATCCCCGGGC...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS-3UTR CCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCTTGGCTGGTAAATCTTaGAAGACCTGCTACTATGAG +
Preference number: 4 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFLAGKS*KTCYYE
Trigger: CTCATAGTAGCAGGTCTTCCAAGATTTACCAGCCAA...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCCTTCACAGTTGGAGTTaGTTTTCCAGTCACTTCACA +
Preference number: 4 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFLHSWS*FSSHFT
Trigger: TGTGAAGTGACTGGAAAACCAACTCCAACTGTGAAG...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATGACCCACTTCACAGTTaGAGTTGGTTTTCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHDPLHS*SWFSSH
Trigger: GTGACTGGAAAACCAACTCCAACTGTGAAGTGGGTC...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGTCAAGGATTATCAGTTaGGCTCCAGCTTGTGCATTT +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGSRIIS*APACAF
Trigger: AAATGCACAAGCTGGAGCCCAACTGATAATCCTTGA...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGACGAAGGTTAGGTGCTaGGCCAGGGAGCTGAACCTC +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMTKVRC*ARELNL
Trigger: GAGGTTCAGCTCCCTGGCCCAGCACCTAACCTTCGT...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTTGTGGCTGGAGCAGGTaGCTGCCAGTGAATCATAAT +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLCGWSR*LPVNHN
Trigger: ATTATGATTCACTGGCAGCCACCTGCTCCAGCCACA...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCTCACATAGTGAGAGCTaGGATCCAGATTTTCAATGG +
Preference number: 4 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFSHSES*DPDFQW
Trigger: CCATTGAAAATCTGGATCCCAGCTCTCACTATGTGA...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTCATGGGAGTGGGATCTaGCACTGGAGTGTATGGAGC +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFHGSGI*HWSVWS
Trigger: GCTCCATACACTCCAGTGCCAGATCCCACTCCCATG...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTAGTTACTGCCGCTCATTaGAGGTTTGTAGTCGGATCC +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELVTAAH*RFVVGS
Trigger: GGATCCGACTACAAACCTCCAATGAGCGGCAGTAAC...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTAGTTACTGCCGCTCATTaGAGGTTTGTAGTCGGATCC +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLVTAAH*RFVVGS
Trigger: GGATCCGACTACAAACCTCCAATGAGCGGCAGTAAC...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATGGGCATCATCATTTTTaGTCTCATTCCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHGHHHF*SHSSPS
Trigger: GGAAGGCGAGGAATGAGACCAAAAATGATGATGCCC...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGGAGATGACTGCGAGCTaGAGAAGCGAGGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMEMTAS*RSEAAG
Trigger: TCCAGCAGCCTCGCTTCTCCAGCTCGCAGTCATCTC...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAAACATGGATGTGCCAATaGGCCATGGGCTGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFETWMCQ*AMGCPG
Trigger: ACCCGGGCAGCCCATGGCCCATTGGCACATCCATGT...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACGAAGAGGCTGGCATaGTGTCAGTGCTGGGGGTAT +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQTKRLA*CQCWGY
Trigger: ATACCCCCAGCACTGACACCATGCCAGCCTCTTCGT...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGGGCGAACATGGGCAGTaGGAAGACTCTGGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQGEHGQ*EDSGLN
Trigger: ATTCAGGCCAGAGTCTTCCCACTGCCCATGTTCGCC...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATTGGTTCAGAGCTTGCTaGGACAGTAATGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHWFRAC*DSNGVL
Trigger: AAGCACACCATTACTGTCCCAGCAAGCTCTGAACCA...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTAATTAGTCCTTCCAGGTaGGCCATCTCTTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELISPSR*AISLVS
Trigger: GCTGACCAAAGAGATGGCCCACCTGGAAGGACTAAT...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTATTAGTCCTTCCAGGTaGGCCATCTCTTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLISPSR*AISLVS
Trigger: GCTGACCAAAGAGATGGCCCACCTGGAAGGACTAAT...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTACTGGACACAAAATTTTaGCCCATGGTGCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLLDTKF*PMVPSP
Trigger: AGGACTGGGCACCATGGGCCAAAATTTTGTGTCCAG...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATTCTGGCTCCTCAGCATaGACATTCTTACCAGGCTAT +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHSGSSA*TFLPGY
Trigger: ATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGA...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCAAGGGGCTCTGAAGTGTaGAAGAGAGCGCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: QTSSFLNLQLPQREPIIARGSEV*KRALDW
Trigger: CCAGTCCAGCGCTCTCTTCCACACTTCAGAGCCCCT...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCAAGTTTCTGGGGAATCTaGCCCTCCTGGTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: QTSSFLNLQLPQREPIIASFWGI*PSWWPE
Trigger: CTCTGGCCACCAGGAGGGCCAGATTCCCCAGAAACT...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGCCCGCCCCAATTCTGTaGCAGTATCCAGGTACCAAG +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQPAPIL*QYPGTK
Trigger: CTTGGTACCTGGATACTGCCACAGAATTGGGGCGGG...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTCCCGCCCCAATTCTGTaGCAGTATCCAGGTACCAAG +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFPAPIL*QYPGTK
Trigger: CTTGGTACCTGGATACTGCCACAGAATTGGGGCGGG...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTCCATATCCCCATTTTTaGCCCACTTCACAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVPYPHF*PTSQLE
Trigger: CTCCAACTGTGAAGTGGGTCAAAAATGGGGATATGG...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTAGCACTGGGAACATCTaGCAATGTTCGAACAGCAAC +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLSTGNI*QCSNSN
Trigger: GTTGCTGTTCGAACATTGTCAGATGTTCCCAGTGCT...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTAGACCTTCAATCAGCTaGGACAGCTGTGTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFRPSIS*DSCVPL
Trigger: AAGCGGGACACAGCTGTCTCAGCTGATTGAAGGTCT...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGCCGGGCCTGTACCATTaGTTGTTAGAGCAGCCACTC +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMPGLYH*LLEQPL
Trigger: GAGTGGCTGCTCTAACAATCAATGGTACAGGCCCGG...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATCCAGACCCTGAGGCTTaGTCATTAGGCATTTTATCA +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHPDPEA*SLGILS
Trigger: TGATAAAATGCCTAATGATCAAGCCTCAGGGTCTGG...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGTTCCCTTTGTACTTATaGGAGCCATTCACTGATTTG +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGFPLYL*EPFTDL
Trigger: CAAATCAGTGAATGGCTCTCATAAGTACAAAGGGAA...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTTCAGTGCAGCATGTTTaGGACGAAGAGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFSVQHV*DEEAGM
Trigger: CATGCCAGCCTCTTCGTCTCAAACATGCTGCACTGA...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAATCAGTGCAGCATGTTTaGGACGAAGAGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQSVQHV*DEEAGM
Trigger: CATGCCAGCCTCTTCGTCTCAAACATGCTGCACTGA...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGGAAGTCAGGTCCTGGTaGAGGTCGTCATGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQEVRSW*RSSCCC
Trigger: ACAACAGCATGACGACCTTCACCAGGACCTGACTTC...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGCACCCGCCCCAATACTaGAACTGCACAGAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQHPPQY*NCTESN
Trigger: GTTGCTTTCTGTGCAGTTTCAGTATTGGGGCGGGTG...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTGTAGGGGAAGATGCCTaGGCGTCAGTCGTGTGTTTT +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFVGEDA*ASVVCF
Trigger: AAAACACACGACTGACGCTCAGGCATCTTCCCCTAC...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTAGGCGAAGCTGCATATaGACGAAGGTTAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFRRSCI*TKVRCW
Trigger: CCAGCACCTAACCTTCGTGCATATGCAGCTTCGCCT...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTATCTGAATTTCCCCATTaGCAGACACTGGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELSEFPH*QTLVFP
Trigger: GGGAAACACCAGTGTCTGGCAATGGGGAAATTCAGA...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTTCTGAATTTCCCCATTaGCAGACACTGGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLSEFPH*QTLVFP
Trigger: GGGAAACACCAGTGTCTGGCAATGGGGAAATTCAGA...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGGGGCAGCGAGTTGTCTaGCCACGTAATCCTGATGGT +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMGQRVV*PRNPDG
Trigger: ACCATCAGGATTACGTGGGCAGACAACTCGCTGCCC...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGCAAAGTGGTTGCATTTaGATTCTTGTACTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEQSGCI*ILVLGV
Trigger: AACACCAAGTACAAGAATGCAAATGCAACCACTTTG...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGTGGTGTGCTTGGCAATaGAGGATCATAGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQWCAWQ*RIIGGR
Trigger: CCTCCCACCTATGATCCTGCATTGCCAAGCACACCA...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGGGGACAGTAATGGTGTaGTTGGCAATGCAGGATCAT +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLGTVMV*LAMQDH
Trigger: ATGATCCTGCATTGCCAAGCACACCATTACTGTCCC...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAAAGCCTCAGGGGGCACTaGAGCTCTGCCTTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFESLRGH*SSALSH
Trigger: ATGAGACAAGGCAGAGCTGCAGTGCCCCCTGAGGCT...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGGAGTAGGGGAAGATaGCTGAGCGTCAGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: FLGKRTQELCAKAMASMCGSRGR*LSVSRV
Trigger: CACACGACTGACGCTCAGGCATCTTCCCCTACTCCC...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGTATCACCTCAGGATCTaGAAGAACCTTCAATTCAAC +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGYHLRI*KNLQFN
Trigger: GTTGAATTGAAGGTTCTTCCAGATCCTGAGGTGATA...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGGCAGTGGTCCCGTTGTaGCTGGTGCATGTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMAVVPL*LVHVQG
Trigger: TCCTTGAACATGCACCAGCCACAACGGGACCACTGC...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTTCTGAGGAGCAGCACTaGGAACATCTGACAATGTTC +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLSEEQH*EHLTMF
Trigger: GAACATTGTCAGATGTTCCCAGTGCTGCTCCTCAGA...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTCCCATTTTGTGTGGCTaGAGCAGGTGGCTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: FLGKRTQELCAKAMASMCPILCG*SRWLPV
Trigger: CACTGGCAGCCACCTGCTCCAGCCACACAAAATGGG...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCACATGGGAGTGGGATCTaGCACTGGAGTGTATGGAGC +
Preference number: 4 (lower is better)
Translates to: QTSSFLNLQLPQREPIIAHGSGI*HWSVWS
Trigger: GCTCCATACACTCCAGTGCCAGATCCCACTCCCATG...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTATCAAAGGTGGTCCCATaGGCTGTCATACTCCATGTA +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLSKVVP*AVILHV
Trigger: TACATGGAGTATGACAGCCCATGGGACCACCTTTGA...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTTCAAAGGTGGTCCCATaGGCTGTCATACTCCATGTA +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVSKVVP*AVILHV
Trigger: TACATGGAGTATGACAGCCCATGGGACCACCTTTGA...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTACAACAGTCACATCCTTaGGTGGAGAAGTCGGAACTA +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELQQSHP*VEKSEL
Trigger: TAGTTCCGACTTCTCCACCCAAGGATGTGACTGTTG...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGGCACTAATCACAGGCTaGGGTGGCTGGGAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMALITG*GGWESK
Trigger: CTTTGACTCCCAGCCACCCCAGCCTGTGATTAGTGC...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGGCAGTGGGAAGACTCTaGCCTGAATCTTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQAVGRL*PESSSW
Trigger: CCAAGAGGAAGATTCAGGCCAGAGTCTTCCCACTGC...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTAAGCTCTTCAATGGGTaGGAAGGGCGAACATGGGCA +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFKLFNG*EGRTWA
Trigger: TGCCCATGTTCGCCCTTCCCACCCATTGAAGAGCTT...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTATGCAGGATCATAGGTaGGAGGTCCTGGAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: FLGKRTQELCAKAMASMCMQDHR*EVLEAG
Trigger: TCCCGCCTCCAGGACCTCCCACCTATGATCCTGCAT...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTATGGTTCAGAGCTTGCTaGGACAGTAATGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELWFRAC*DSNGVL
Trigger: AAGCACACCATTACTGTCCCAGCAAGCTCTGAACCA...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGCAAAATTTTGGCCCATaGTGCCCAGTCCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLQNFGP*CPVLQN
Trigger: ATTCTGCAGGACTGGGCACCATGGGCCAAAATTTTG...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTTTCTCGCCTCTTCCCTaGACACAAAATTTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVFSPLP*TQNFGP
Trigger: TGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAA...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGTGGTGGCCAGAGTGCTaGGACAGCTCTCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMWWPEC*DSSLQD
Trigger: ATCCTGAAGAGAGCTGTCCCAGCACTCTGGCCACCA...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCAGTCAGGGTTTGTaGGAGGAAATGCCCCAAATA +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLSSQGL*EEMPQI
Trigger: TATTTGGGGCATTTCCTCCCACAAACCCTGACTGCT...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTAGCAGTCAGGGTTTGTaGGAGGAAATGCCCCAAATA +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVSSQGL*EEMPQI
Trigger: TATTTGGGGCATTTCCTCCCACAAACCCTGACTGCT...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGGTGGCTGGTGCTAGATaGTCAGTAGTGGCACTGGTC +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMVAGAR*SVVALV
Trigger: GACCAGTGCCACTACTGACCATCTAGCACCAGCCAC...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS-3UTR CCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAACATGGGAGTGGGATCTaGCACTGTGTGAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFEHGSGI*HCVRPG
Trigger: ACCAGGCCTCACACAGTGCCAGATCCCACTCCCATG...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560328.1
3UTR CAA 72 bp ACAAAGACACGGCCTGACCACAAAGTGAAATGCAGGTaGCACTTCTCGCCTCTTCCCTGGACACAAAATTTT +
Preference number: 4 (lower is better)
Translates to: TKTRPDHKVKCR*HFSPLPWTQNF
Trigger: AAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTGCATTTCACTTTGTGGTCAGGCCGTGTCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGAGAAGAGCCTCTAACTaGGAGTGTATCCACCGGCTC +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMRRASN*ECIHRL
Trigger: GAGCCGGTGGATACACTCTCAGTTAGAGGCTCTTCT...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTGCAGGTGGCTGCCAGTaGATCATAATACTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLAGGCQ*IIILFE
Trigger: TTCAAAGAGTATTATGATTCACTGGCAGCCACCTGC...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAATTACCAAGGTCTCAGTaGCATCACTCTTTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQLPRSQ*HHSFGR
Trigger: CCTCCCGAAAGAGTGATGTCACTGAGACCTTGGTAA...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTACAATGGCGTAACCTCTaGCCACAATGTTCTGATTCT +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLQWRNL*PQCSDS
Trigger: AGAATCAGAACATTGTGGTCAGAGGTTACGCCATTG...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCCAACAGAAACAATTATaGCCAGCAGCATATTACTGT +
Preference number: 4 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFQQKQL*PAAYYC
Trigger: ACAGTAATATGCTGCTGGTCATAATTGTTTCTGTTG...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGTTGGAGTATCAGTCATaGTGGGGTTTGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQLEYQS*WGLGLE
Trigger: CTCCAGACCCAAACCCCATCATGACTGATACTCCAA...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTACTGGTGTGATATCTTaGGAGTTGCGAGGAATTGGA +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVTGVIS*ELRGIG
Trigger: TCCAATTCCTCGCAACTCTCAAGATATCACACCAGT...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAACACAAAGACACGGCCTaGCCACAAAGTGAAATGCAG +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQHKDTA*PQSEMQ
Trigger: CTGCATTTCACTTTGTGGTCAGGCCGTGTCTTTGTG...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGATTCTTACCAGGCTATaGCCAAGACATCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMILTRL*PRHQGR
Trigger: GCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAAT...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTATCCATCCTTGCTTTCTaGTTTACAGAATGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELSILAF*FTEWGQ
Trigger: CTGACCCCATTCTGTAAATCAGAAAGCAAGGATGGA...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATAAATCTTGGAAGACCTaGTACTATGAGCTTCGCTGT +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHKSWKT*YYELRC
Trigger: ACAGCGAAGCTCATAGTAGCAGGTCTTCCAAGATTT...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR GCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCAAATGGGACCAAATCTaGATTAACTTCACAATTCAG +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPKWDQI*INFTIQ
Trigger: CTGAATTGTGAAGTTAATGCAGATTTGGTCCCATTT...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR GCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTGCCATCTCCTTCAGTTaGATTGCTGATAACCAGCAT +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVAISFS*IADNQH
Trigger: ATGCTGGTTATCAGCAATGCAACTGAAGGAGATGGC...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR GCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAACAGACATGGGTCCCATaGCCTTTGAGTTCCGTGCCT +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFEQTWVP*PLSSVP
Trigger: AGGCACGGAACTCAAAGGGCATGGGACCCATGTCTG...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTCAGACATGGGTCCCATaGCCTTTGAGTTCCGTGCCT +
Preference number: 4 (lower is better)
Translates to: FLGKRTQELCAKAMASMCQTWVP*PLSSVP
Trigger: AGGCACGGAACTCAAAGGGCATGGGACCCATGTCTG...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGACAGCTGGTAGAGGATaGAATGACTCAGAATTAAAA +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGTAGRG*NDSELK
Trigger: TTTTAATTCTGAGTCATTGCATCCTCTACCAGCTGT...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGGATGCTTCCATTCTCTaGAGGCTTCTGGAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLDASIL*RLLEES
Trigger: ACTTTCTTCCAGAAGCCTGCAGAGAATGGAAGCATC...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTAATTTACTGTCTACACTaGCTTCCACGCTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLIYCLH*LPRCLL
Trigger: CAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAAT...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTTACTTGCATCTCTCCTaGGTGACTGGTATTCTCAAC +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVYLHLS*VTGILN
Trigger: GTTGAGAATACCAGTCACCCAGGAGAGATGCAAGTA...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTAATGTTCTGATTCTCTaGAGGAGTCCAGCTCACTAC +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVNVLIL*RSPAHY
Trigger: GTAGTGAGCTGGACTCCTCCAGAGAATCAGAACATT...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCGATCCAGATTTTCAATaGTGTAATAGCGCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: LFRISLSALVFQNPAWHPDPDFQ*CNSAVY
Trigger: ATAAACAGCGCTATTACACCATTGAAAATCTGGATC...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGGATCCAGATTTTCAATaGTGTAATAGCGCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEDPDFQ*CNSAVY
Trigger: ATAAACAGCGCTATTACACCATTGAAAATCTGGATC...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTAGTGGGATCTGGCACTaGAGTGTATGGAGCATTAAT +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLSGIWH*SVWSIN
Trigger: ATTAATGCTCCATACACTCCAGTGCCAGATCCCACT...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTGAACTAATTCAAAGGTaGTCCCATGGGCTGTCATAC +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLELIQR*SHGLSY
Trigger: GTATGACAGCCCATGGGACCACCTTTGAATTAGTTC...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATATGGATCCAGAGATCTaGAGGTTTCACATCTTTGGA +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHMDPEI*RFHIFG
Trigger: TCCAAAGATGTGAAACCTCCAGATCTCTGGATCCAT...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTGATGGGGTTTGGGTCTaGAGACTTATCAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLDGVWV*RLINGF
Trigger: AAACCCATTGATAAGTCTCCAGACCCAAACCCCATC...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTAGATGGGGTTTGGGTCTaGAGACTTATCAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLDGVWV*RLINGF
Trigger: AAACCCATTGATAAGTCTCCAGACCCAAACCCCATC...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTGGGTTATCGAGGGAATaGATGGGATGGGCACTAATC +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFGLSRE*MGWALI
Trigger: GATTAGTGCCCATCCCATCCATTCCCTCGATAACCC...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTTGTCTGAAAGGGACATaGATGTGCCAATGGGCCATG +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFCLKGT*MCQWAM
Trigger: CATGGCCCATTGGCACATCCATGTCCCTTTCAGACA...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAACGGATTCTGTGGAATTaGCCCTGTCTGAAAGGGACA +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQRILWN*PCLKGT
Trigger: TGTCCCTTTCAGACAGGGCCAATTCCACAGAATCCG...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAAACGAAGAGGCTGGCATaGTGTCAGTGCTGGGGGTAT +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFETKRLA*CQCWGY
Trigger: ATACCCCCAGCACTGACACCATGCCAGCCTCTTCGT...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTATTTGGTCAGCTCATCTaGTTCATAGCTACTCTCGGA +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLFGQLI*FIATLG
Trigger: TCCGAGAGTAGCTATGAACCAGATGAGCTGACCAAA...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGCGCTGGCCAGTCTGCTaGCTCATTCTGTGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMRWPVC*LILCSQ
Trigger: TTGAGAACACAGAATGAGCCAGCAGACTGGCCAGCG...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTACACCAAGGACTTCCTTaGTTTTGGATGGCGTTTTTG +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELHQGLP*FWMAFL
Trigger: CAAAAACGCCATCCAAAACCAAGGAAGTCCTTGGTG...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGCTTTCCATACATAATTaGAACAAGCAGTCAAATGTC +
Preference number: 4 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGELSIHN*NKQSNV
Trigger: GACATTTGACTGCTTGTTCCAATTATGTATGGAAAG...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGTGGGGTACCCACTGGTaGTTTCAGCAGCTGATCTCT +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMWGTHW*FQQLIS
Trigger: AGAGATCAGCTGCTGAAACCACCAGTGGGTACCCCA...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATACTGAGCATGTTCTTTaGGCAAAAGGTAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHTEHVL*AKGSFW
Trigger: CCAGAAACTACCTTTTGCCCAAAGAACATGCTCAGT...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAACCCGCCCCAATTCTGTaGCAGTATCCAGGTACCAAG +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFEPAPIL*QYPGTK
Trigger: CTTGGTACCTGGATACTGCCACAGAATTGGGGCGGG...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGCAAAAATACCAAGTCTaGTATCACCTCAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLQKYQV*YHLRIW
Trigger: CCAGATCCTGAGGTGATATCAGACTTGGTATTTTTG...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGGGCAACACTACATCCTaGCCAATGACTCTGACTAAG +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQGNTTS*PMTLTK
Trigger: CTTAGTCAGAGTCATTGGTCAGGATGTAGTGTTGCC...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGGTTTATAGTCCACTTTaGTGGTCTGGGCATGAGGGC +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMVYSPL*WSGHEG
Trigger: GCCCTCATGCCCAGACCATCAAAGTGGACTATAAAC...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGAGCTCCAGTCTCTCATaGTGGATCCAGAGATCTGGA +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMSSSLS*WIQRSG
Trigger: TCCAGATCTCTGGATCCATCATGAGAGACTGGAGCT...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGTTCCAGACTCAGGTTTaGAGTCAGGTCCTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMFQTQV*SQVLVK
Trigger: CTTCACCAGGACCTGACTTCAAACCTGAGTCTGGAA...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTAAAATGCCCCAAATACTaGGCATGTTCTTTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLKCPKY*ACSLGK
Trigger: TTTGCCCAAAGAACATGCTCAGTATTTGGGGCATTT...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGAAATGGGACCAAATCTaGATTAACTTCACAATTCAG +
Preference number: 4 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGKWDQI*INFTIQ
Trigger: CTGAATTGTGAAGTTAATGCAGATTTGGTCCCATTT...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR GCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGCTCCAGGCTACCACCTaGCAGCAATACCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMLQATT*QQYQSF
Trigger: GAAAGATTGGTATTGCTGGCAGGTGGTAGCCTGGAG...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR GCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGTCTGTAATCTTCTGGTaGTTGGGCAGCGAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQSVIFW*LGSELS
Trigger: AGACAACTCGCTGCCCAAGCACCAGAAGATTACAGA...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTGGGACAGTAATGGTGTaGTTGGCAATGCAGGATCAT +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFGTVMV*LAMQDH
Trigger: ATGATCCTGCATTGCCAAGCACACCATTACTGTCCC...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTGACCACAAAGTGAAATaGAGGTTGCACTTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFDHKVK*RLHFSP
Trigger: AGGCGAGAAGTGCAACCTGCATTTCACTTTGTGGTC...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTCAGGATCAGTTTAAGTaGACTGGTTTTCCAGAATCC +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVQDQFK*TGFPES
Trigger: GGATTCTGGAAAACCAGTGCACTTAAACTGATCCTG...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGTTCCCACCTCACAAATaGGACCAAATCTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLFPPHK*DQICIN
Trigger: GTTAATGCAGATTTGGTCCCATTTGTGAGGTGGGAA...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTTTCCCACCTCACAAATaGGACCAAATCTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVFPPHK*DQICIN
Trigger: GTTAATGCAGATTTGGTCCCATTTGTGAGGTGGGAA...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGTCTCTCCTGGGTGACTaGTATTCTCAACACGTTCCC +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMSLLGD*YSQHVP
Trigger: GGGAACGTGTTGAGAATACCAGTCACCCAGGAGAGA...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTATCACATAGTGAGAGCTaGGATCCAGATTTTCAATGG +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLSHSES*DPDFQW
Trigger: CCATTGAAAATCTGGATCCCAGCTCTCACTATGTGA...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGTGTCATGACTCAGAATaGAAGCCTGAACTCCCACTG +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQCHDSE*KPELPL
Trigger: CAGTGGGAGTTCAGGCTTCCATTCTGAGTCATGACA...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAATGTCATGACTCAGAATaGAAGCCTGAACTCCCACTG +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQCHDSE*KPELPL
Trigger: CAGTGGGAGTTCAGGCTTCCATTCTGAGTCATGACA...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCAGAGTCTGTAATCTTCTaGTGCTTGGGCAGCGAGTTG +
Preference number: 4 (lower is better)
Translates to: QTSSFLNLQLPQREPIIAESVIF*CLGSEL
Trigger: CAACTCGCTGCCCAAGCACCAGAAGATTACAGACTC...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGTGTTTGCTGGGATGTTaGTTTTCCATCGGACGGTGT +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQCLLGC*FSIGRC
Trigger: ACACCGTCCGATGGAAAACCAACATCCCAGCAAACA...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGTTAGGTGTTCTGAATTaGACAGCTTCAGACATGGGT +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLLGVLN*TASDMG
Trigger: ACCCATGTCTGAAGCTGTCCAATTCAGAACACCTAA...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGGGGTTATCGAGGGAATaGATGGGATGGGCACTAATC +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMGLSRE*MGWALI
Trigger: GATTAGTGCCCATCCCATCCATTCCCTCGATAACCC...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAAGAGAAGCGAGGCTGCTaGAGTGGAAATGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFEEKRGC*SGNDGE
Trigger: CTCACCATCATTTCCACTCCAGCAGCCTCGCTTCTC...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGTGTCTGAAAGGGACATaGATGTGCCAATGGGCCATG +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMCLKGT*MCQWAM
Trigger: CATGGCCCATTGGCACATCCATGTCCCTTTCAGACA...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCATTCCTAGAGTCCCGATaGAGGCTGTCTTCACTGAGT +
Preference number: 4 (lower is better)
Translates to: QTSSFLNLQLPQREPIIAFLESR*RLSSLS
Trigger: ACTCAGTGAAGACAGCCTCCATCGGGACTCTAGGAA...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTCAAAATTTTGGCCCATaGTGCCCAGTCCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFQNFGP*CPVLQN
Trigger: ATTCTGCAGGACTGGGCACCATGGGCCAAAATTTTG...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAATATGTGCAAAGGCAATaGCTTCCATGTGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQYVQRQ*LPCVAE
Trigger: CTCAGCCACACATGGAAGCCATTGCCTTTGCACATA...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAATGGGGTACCCACTGGTaGTTTCAGCAGCTGATCTCT +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFEWGTHW*FQQLIS
Trigger: AGAGATCAGCTGCTGAAACCACCAGTGGGTACCCCA...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTAACTGAGCATGTTCTTTaGGCAAAAGGTAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLTEHVL*AKGSFW
Trigger: CCAGAAACTACCTTTTGCCCAAAGAACATGCTCAGT...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
3UTR CAA 72 bp TCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTaGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTC +
Preference number: 4 (lower is better)
Translates to: SQVLSSRTLYNS*FSRVSSKTSRL
Trigger: GAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTTTACCAAGGTCTCAGTaGCATCACTCTTTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: FLGKRTQELCAKAMASMCLPRSQ*HHSFGR
Trigger: CCTCCCGAAAGAGTGATGTCACTGAGACCTTGGTAA...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAACATACTCCATGTACTTaGTCTTCGACCTTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQHTPCT*SSTFGH
Trigger: GTGACCAAAGGTCGAAGATCAAGTACATGGAGTATG...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGAACTCTTGTATCTGGTaGGTCAGTCTGTTTCCCACA +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQNSCIW*VSLFPT
Trigger: TGTGGGAAACAGACTGACTCACCAGATACAAGAGTT...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAATCCGTGCCTGGATTTTaGAGTAGTATGGTGTGTCAA +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQSVPGF*SSMVCQ
Trigger: TTGACACACCATACTACTTCAAAATCCAGGCACGGA...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGCCAGACCCTGAGGCTTaGTCATTAGGCATTTTATCA +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQPDPEA*SLGILS
Trigger: TGATAAAATGCCTAATGATCAAGCCTCAGGGTCTGG...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGTATGAATTTCGCCTTTaGTGGATATTGCTGTCCATG +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLYEFRL*WILLSM
Trigger: CATGGACAGCAATATCCATCAAAGGCGAAATTCATA...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTTTACCCTATTCTGTGTaGCTCAGGCAGTTAGAAATA +
Preference number: 4 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVLPYSV*LRQLEI
Trigger: TATTTCTAACTGCCTGAGTCACACAGAATAGGGTAA...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAACTCCAGGCTACCACCTaGCAGCAATACCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFELQATT*QQYQSF
Trigger: GAAAGATTGGTATTGCTGGCAGGTGGTAGCCTGGAG...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR GCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGTTCTGTGTTCTCAAGTaGTGTCCTCTCGTACTCTGT +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQFCVLK*CPLVLC
Trigger: ACAGAGTACGAGAGGACAGCACTTGAGAACACAGAA...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCAAATTTTGGCCCATGGTaGCCAGTCCTGCAGAATATC +
Preference number: 4 (lower is better)
Translates to: QTSSFLNLQLPQREPIIANFGPW*PVLQNI
Trigger: GATATTCTGCAGGACTGGGCACCATGGGCCAAAATT...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTGAGGAAGGTTCTGGTTaGCTGGTAAATCTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFEEGSG*LVNLGR
Trigger: TCTTCCAAGATTTACCAGCCAACCAGAACCTTCCTC...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAATCACTATACTTTGGTaGCCCACCACTTTCCACTAC +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQITILW*PTTFHY
Trigger: GTAGTGGAAAGTGGTGGGCCACCAAAGTATAGTGAT...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTATCACTATACTTTGGTaGCCCACCACTTTCCACTAC +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFITILW*PTTFHY
Trigger: GTAGTGGAAAGTGGTGGGCCACCAAAGTATAGTGAT...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAATCGAACAGCAACATCTaGTGTGGAAACTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFESNSNI*CGNSRT
Trigger: GGTCCTGGAGTTTCCACACCAGATGTTGCTGTTCGA...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGTCTGAGGAGCAGCACTaGGAACATCTGACAATGTTC +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMSEEQH*EHLTMF
Trigger: GAACATTGTCAGATGTTCCCAGTGCTGCTCCTCAGA...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTAATGTTCTGATTCTCTaGAGGAGTCCAGCTCACTAC +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFNVLIL*RSPAHY
Trigger: GTAGTGAGCTGGACTCCTCCAGAGAATCAGAACATT...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGTGTTTGCTGGGATGTTaGTTTTCCATCGGACGGTGT +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMCLLGC*FSIGRC
Trigger: ACACCGTCCGATGGAAAACCAACATCCCAGCAAACA...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCACAACAGTCACATCCTTaGGTGGAGAAGTCGGAACTA +
Preference number: 4 (lower is better)
Translates to: QTSSFLNLQLPQREPIIAQQSHP*VEKSEL
Trigger: TAGTTCCGACTTCTCCACCCAAGGATGTGACTGTTG...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAAGGGTTATCGAGGGAATaGATGGGATGGGCACTAATC +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFEGLSRE*MGWALI
Trigger: GATTAGTGCCCATCCCATCCATTCCCTCGATAACCC...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAATTCGAACGGATTCTGTaGAATTGGCCCTGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQFERIL*NWPCLK
Trigger: TTTCAGACAGGGCCAATTCCACAGAATCCGTTCGAA...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGTTTGGTCAGCTCATCTaGTTCATAGCTACTCTCGGA +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQFGQLI*FIATLG
Trigger: TCCGAGAGTAGCTATGAACCAGATGAGCTGACCAAA...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAACTGGACACAAAATTTTaGCCCATGGTGCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFELDTKF*PMVPSP
Trigger: AGGACTGGGCACCATGGGCCAAAATTTTGTGTCCAG...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTACAGGACACACAATaGTTTAGTTTCGAAAATCAC +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHLQDTQ*FSFENH
Trigger: GTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAG...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTCCATATCCCCATTTTTaGCCCACTTCACAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: FLGKRTQELCAKAMASMCPYPHF*PTSQLE
Trigger: CTCCAACTGTGAAGTGGGTCAAAAATGGGGATATGG...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGATAGAACCCTTCATCTaGTTTCACCAGACCCAAAAC +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQIEPFI*FHQTQN
Trigger: GTTTTGGGTCTGGTGAAATCAGATGAAGGGTTCTAT...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTACAACAGAAACAATTATaGCCAGCAGCATATTACTGT +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELQQKQL*PAAYYC
Trigger: ACAGTAATATGCTGCTGGTCATAATTGTTTCTGTTG...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAAATGAGAGCCATTCACTaGTTTGCAGGCAGCTCGTTT +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFEMRAIH*FAGSSF
Trigger: AAACGAGCTGCCTGCAAATCAGTGAATGGCTCTCAT...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAAGGTGGTTTCAGCAGCTaGTCTCTTCTTGGCTATAGA +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFEGGFSS*SLLGYR
Trigger: TCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACC...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTAAATGCCCCAAATACTaGGCATGTTCTTTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFKCPKY*ACSLGK
Trigger: TTTGCCCAAAGAACATGCTCAGTATTTGGGGCATTT...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTTTGGGCTCCAGCTTGTaGATTTCCAACATCATTTTC +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFLGSSL*ISNIIF
Trigger: GAAAATGATGTTGGAAATGCACAAGCTGGAGCCCAA...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTTCTGTAATCTTCTGGTaGTTGGGCAGCGAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: FLGKRTQELCAKAMASMCSVIFW*LGSELS
Trigger: AGACAACTCGCTGCCCAAGCACCAGAAGATTACAGA...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTTGTTTCCGCTGTCCCTaGCCTTGTTACTTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFCFRCP*PCYLKN
Trigger: ATTTTTCAAGTAACAAGGGCAGGGACAGCGGAAACA...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATTTTCCATTCAATTTTTaGAGAAGGCTCAGAATATGC +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHFPFNF*RRLRIC
Trigger: GCATATTCTGAGCCTTCTCCAAAAATTGAATGGAAA...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGTTGGCTGGTAAATCTTaGAAGACCTGCTACTATGAG +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQLAGKS*KTCYYE
Trigger: CTCATAGTAGCAGGTCTTCCAAGATTTACCAGCCAA...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAATCAAGGATTATCAGTTaGGCTCCAGCTTGTGCATTT +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQSRIIS*APACAF
Trigger: AAATGCACAAGCTGGAGCCCAACTGATAATCCTTGA...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAATGTCATGACTCAGAATaGAAGCCTGAACTCCCACTG +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFECHDSE*KPELPL
Trigger: CAGTGGGAGTTCAGGCTTCCATTCTGAGTCATGACA...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGTTGCATTCTTGTACTTaGTGTTTGCTGGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQLHSCT*CLLGCW
Trigger: CCAACATCCCAGCAAACACCAAGTACAAGAATGCAA...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATGAGGTTTCACATCTTTaGAATTCCCTTTGTACTTAT +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHEVSHL*NSLCTY
Trigger: ATAAGTACAAAGGGAATTCCAAAGATGTGAAACCTC...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTATGGATCCAGAGATCTaGAGGTTTCACATCTTTGGA +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFMDPEI*RFHIFG
Trigger: TCCAAAGATGTGAAACCTCCAGATCTCTGGATCCAT...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAAGGGCATCATCATTTTTaGTCTCATTCCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFEGHHHF*SHSSPS
Trigger: GGAAGGCGAGGAATGAGACCAAAAATGATGATGCCC...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTTTCCATACATAATTaGAACAAGCAGTCAAATGTC +
Preference number: 4 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHLSIHN*NKQSNV
Trigger: GACATTTGACTGCTTGTTCCAATTATGTATGGAAAG...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTACTACAGGACACACAATaGTTTAGTTTCGAAAATCAC +
Preference number: 4 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELLQDTQ*FSFENH
Trigger: GTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAG...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTACTACAGGACACACAATaGTTTAGTTTCGAAAATCAC +
Preference number: 4 (lower is better)
Translates to: LVVSAADLFLAIELKPDLLQDTQ*FSFENH
Trigger: GTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAG...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGGAAAATAAAATGGAGTaGACGTTCGAATGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMENKME*TFECWL
Trigger: GAGCCAGCATTCGAACGTTCACTCCATTTTATTTTC...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR TCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTGAGCCATGCTTATTTTaGGCCATAACTCTAAAGATG +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFEPCLF*AITLKM
Trigger: CATCTTTAGAGTTATGGCTCAAAATAAGCATGGCTC...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAAAGTTGTCAACTGGTGTaGTATCTTGAGAGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFESCQLV*YLESCE
Trigger: CTCGCAACTCTCAAGATATCACACCAGTTGACAACT...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAATCCATCCTTGCTTTCTaGTTTACAGAATGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFESILAF*FTEWGQ
Trigger: CTGACCCCATTCTGTAAATCAGAAAGCAAGGATGGA...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGTTCACAATTCAGAATTaGATTGTTCCCAGCATAAAC +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLFTIQN*IVPSIN
Trigger: GTTTATGCTGGGAACAATGCAATTCTGAATTGTGAA...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR GCA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTACCCACGTTATTAAATaGTTTCAGGGTAATCACATA +
Preference number: 4 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLTHVIK*FQGNHI
Trigger: TATGTGATTACCCTGAAAGCATTTAATAACGTGGGT...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGACCCACGTTATTAAATaGTTTCAGGGTAATCACATA +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLTHVIK*FQGNHI
Trigger: TATGTGATTACCCTGAAAGCATTTAATAACGTGGGT...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCAAGCCATTCACTGATTTaGAGGCAGCTCGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: QTSSFLNLQLPQREPIIASHSLI*RQLVSF
Trigger: AAAAGAAACGAGCTGCCTGCAAATCAGTGAATGGCT...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAATTCTGTGTTCTCAAGTaGTGTCCTCTCGTACTCTGT +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFEFCVLK*CPLVLC
Trigger: ACAGAGTACGAGAGGACAGCACTTGAGAACACAGAA...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCATGTTTCCGCTGTCCCTaGCCTTGTTACTTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: QTSSFLNLQLPQREPIIACFRCP*PCYLKN
Trigger: ATTTTTCAAGTAACAAGGGCAGGGACAGCGGAAACA...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAATACTTGCATCTCTCCTaGGTGACTGGTATTCTCAAC +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFEYLHLS*VTGILN
Trigger: GTTGAGAATACCAGTCACCCAGGAGAGATGCAAGTA...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAGCATTAGGTTTTGAATaGTTACTTGCATCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQALGFE*LLASLL
Trigger: CAGGAGAGATGCAAGTAACCATTCAAAACCTAATGC...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGGAGGTTTCACATCTTTaGAATTCCCTTTGTACTTAT +
Preference number: 4 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLEVSHL*NSLCTY
Trigger: ATAAGTACAAAGGGAATTCCAAAGATGTGAAACCTC...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTCTGGAGACTTATCAATaGGTTTCAGCTCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: FLGKRTQELCAKAMASMCLETYQ*VSAPVS
Trigger: AGAGACTGGAGCTGAAACCCATTGATAAGTCTCCAG...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCATTACCCTATTCTGTGTaGCTCAGGCAGTTAGAAATA +
Preference number: 4 (lower is better)
Translates to: QTSSFLNLQLPQREPIIALPYSV*LRQLEI
Trigger: TATTTCTAACTGCCTGAGTCACACAGAATAGGGTAA...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTACAGCTGGTAGAGGATaGAATGACTCAGAATTAAAA +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFTAGRG*NDSELK
Trigger: TTTTAATTCTGAGTCATTGCATCCTCTACCAGCTGT...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTAACCCAAGAACTATGTaGAAAGGCAATGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: FLGKRTQELCAKAMASMCNPRTM*KGNGFH
Trigger: ATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTT...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAATCACATAGTGAGAGCTaGGATCCAGATTTTCAATGG +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFESHSES*DPDFQW
Trigger: CCATTGAAAATCTGGATCCCAGCTCTCACTATGTGA...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAATTAGGTGTTCTGAATTaGACAGCTTCAGACATGGGT +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFELGVLN*TASDMG
Trigger: ACCCATGTCTGAAGCTGTCCAATTCAGAACACCTAA...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGACCAGACCCAAAACTTaGAGATTATGTTCCTTTACA +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMTRPKT*RLCSFT
Trigger: TGTAAAGGAACATAATCTTCAAGTTTTGGGTCTGGT...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCACAACAGAAACAATTATaGCCAGCAGCATATTACTGT +
Preference number: 4 (lower is better)
Translates to: QTSSFLNLQLPQREPIIAQQKQL*PAAYYC
Trigger: ACAGTAATATGCTGCTGGTCATAATTGTTTCTGTTG...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTTTCCCTTTGTACTTATaGGAGCCATTCACTGATTTG +
Preference number: 4 (lower is better)
Translates to: FLGKRTQELCAKAMASMCFPLYL*EPFTDL
Trigger: CAAATCAGTGAATGGCTCTCATAAGTACAAAGGGAA...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR TCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAATTACCCTATTCTGTGTaGCTCAGGCAGTTAGAAATA +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFELPYSV*LRQLEI
Trigger: TATTTCTAACTGCCTGAGTCACACAGAATAGGGTAA...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTTTCACAATTCAGAATTaGATTGTTCCCAGCATAAAC +
Preference number: 4 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFFTIQN*IVPSIN
Trigger: GTTTATGCTGGGAACAATGCAATTCTGAATTGTGAA...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR GCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACCCACGTTATTAAATaGTTTCAGGGTAATCACATA +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQTHVIK*FQGNHI
Trigger: TATGTGATTACCCTGAAAGCATTTAATAACGTGGGT...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGAAATCAAACTCCAGTTaGAACGTAGTGACAATAAGG +
Preference number: 4 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMKSNSS*NVVTIR
Trigger: CCTTATTGTCACTACGTTGCAACTGGAGTTTGATTT...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGTTTCCATTCAATTTTTaGAGAAGGCTCAGAATATGC +
Preference number: 4 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQFPFNF*RRLRIC
Trigger: GCATATTCTGAGCCTTCTCCAAAAATTGAATGGAAA...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCAAACCAGCATTCCACTTaGAAGTTTGATAACTCTATC +
Preference number: 4 (lower is better)
Translates to: QTSSFLNLQLPQREPIIANQHST*KFDNSI
Trigger: GATAGAGTTATCAAACTTCCAAGTGGAATGCTGGTT...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CCA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTTTGATCTTCGACCTTTaGTCACCATCACAGAGAATT +
Preference number: 4 (lower is better)
Translates to: FLGKRTQELCAKAMASMCLIFDL*SPSQRI
Trigger: AATTCTCTGTGATGGTGACCAAAGGTCGAAGATCAA...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR GCA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAAAAATCAAACTCCAGTTaGAACGTAGTGACAATAAGG +
Preference number: 4 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFEKSNSS*NVVTIR
Trigger: CCTTATTGTCACTACGTTGCAACTGGAGTTTGATTT...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CCA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTAACCAGCATTCCACTTaGAAGTTTGATAACTCTATC +
Preference number: 4 (lower is better)
Translates to: FLGKRTQELCAKAMASMCNQHST*KFDNSI
Trigger: GATAGAGTTATCAAACTTCCAAGTGGAATGCTGGTT...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS CCA 90 bp CAGGGCGCCTCCCTCCTGAGGGCGAGAGGCGCTCCGAGCTCAGGCTaGTCCGGGAGGCCGGCGTGGGCGCGCACCTCTGCACAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: QGASLLRARGAPSSG*SGRPAWARTSAQSG
Trigger: CCCGGACTGTGCAGAGGTGCGCGCCCACGCCGGCCTCCCGGACCAGCCTGAGCTCGGAGCGCCTCTCGCCCTCAGGAGGGAGGCGCCCTG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS CCA 90 bp GTCCGGGAGGCCGGCGTGGGCGCGCACCTCTGCACAGTCCGGGCCTaGAGCCTCTATATAGGGCCTCAGAGGAAACCGAAAGGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: VREAGVGAHLCTVRA*SLYIGPQRKPKGLR
Trigger: CCGGAGGCCTTTCGGTTTCCTCTGAGGCCCTATATAGAGGCTCCAGGCCCGGACTGTGCAGAGGTGCGCGCCCACGCCGGCCTCCCGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS CCA 90 bp GGGAGGCCACGACATCCCGAGGAGCTGAAGGCAGTGGTCCCGTTGTaGCTGGTGCTGGCTCAGAGGGTCCCACGCCCACAGAGTCTCGCC +
Preference number: 5 (lower is better)
Translates to: GRPRHPEELKAVVPL*LVLAQRVPRPQSLA
Trigger: GGCGAGACTCTGTGGGCGTGGGACCCTCTGAGCCAGCACCAGCCACAACGGGACCACTGCCTTCAGCTCCTCGGGATGTCGTGGCCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560352.5
CDS-3UTR CAA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGGTCCTGGAGGCGGGATaGCTGGCACGGCGAAGCTCT +
Preference number: 5 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAVLEAG*LARRSS
Trigger: AGAGCTTCGCCGTGCCAGCAATCCCGCCTCCAGGAC...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS TCA 90 bp GATGAAGCGGGTAGAGACCAGGGAGGCCACGACATCCCGAGGAGCTaGAGGCAGTGGTCCCGTTGTGGCTGGTGCTGGCTCAGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: DEAGRDQGGHDIPRS*RQWSRCGWCWLRGS
Trigger: GGACCCTCTGAGCCAGCACCAGCCACAACGGGACCACTGCCTTCAGCTCCTCGGGATGTCGTGGCCTCCCTGGTCTCTACCCGCTTCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560352.5
CDS TCA 90 bp GATGAAGCGGGTAGAGACCAGGGAGGCCACGACATCCCGAGGAGCTaGAGGCAGTGGTCCCGTTGTGGCTGGTGCAACAGGGGGAGGAGT +
Preference number: 5 (lower is better)
Translates to: DEAGRDQGGHDIPRS*RQWSRCGWCNRGRS
Trigger: ACTCCTCCCCCTGTTGCACCAGCCACAACGGGACCACTGCCTTCAGCTCCTCGGGATGTCGTGGCCTCCCTGGTCTCTACCCGCTTCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560407.1
CDS GCA 90 bp CGGGAGGAAACCTGGGTGCGCAGTGGGTCGGCCCGGGGATTTATGTaGTCGCCAAAAACAATAGCGATCCCGCCCGACTCTTGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: REETWVRSGSARGFM*SPKTIAIPPDSCWA
Trigger: GGCCCAGCAAGAGTCGGGCGGGATCGCTATTGTTTTTGGCGAGCACATAAATCCCCGGGCCGACCCACTGCGCACCCAGGTTTCCTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS-3UTR CAA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCGTCCGCCACGTCAATTaGATGAAGCGGGTAGAGACC +
Preference number: 5 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSVRHVN*MKRVET
Trigger: GGTCTCTACCCGCTTCATCAAATTGACGTGGCGGAC...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGGTAATCTTCTGGTGCTaGGGCAGCGAGTTGTCTGCC +
Preference number: 5 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEAVIFWC*GSELSA
Trigger: GGCAGACAACTCGCTGCCCAAGCACCAGAAGATTAC...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCTGGGTCCCATGCCCTTaGAGTTCCGTGCCTGGATTT +
Preference number: 5 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSWVPCP*SSVPGF
Trigger: AAATCCAGGCACGGAACTCAAAGGGCATGGGACCCA...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCAAGGCAGTGGTCCCGTaGTGGCTGGTGCTAGATGGT +
Preference number: 5 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCKAVVP*WLVLDG
Trigger: ACCATCTAGCACCAGCCACAACGGGACCACTGCCTT...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS GCA 90 bp TGGCCCTGTCTGAAAGGGACATGGATGTGCCAATGGGCCATGGGCTaGCCGGGTGGTAGAGATGACTGCGAGCTGGAGAAGCGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: WPCLKGTWMCQWAMG*PGGRDDCELEKRGC
Trigger: GCAGCCTCGCTTCTCCAGCTCGCAGTCATCTCTACCACCCGGGCAGCCCATGGCCCATTGGCACATCCATGTCCCTTTCAGACAGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS-3UTR CAA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGAGAAGCAGTCAGGGTTaGTGGGAGGAAATGCCCCAA +
Preference number: 5 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEARSSQG*WEEMPQ
Trigger: TTGGGGCATTTCCTCCCACAAACCCTGACTGCTTCT...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCGAGCTGAACCTCAGGTaGTGTTTCTACTCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCELNLR*CFYSQW
Trigger: CCACTGCGAGTAGAAACACAACCTGAGGTTCAGCTC...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGAGTCTTCCAACATCCTaGTGGTCTCCTGCACTTCAG +
Preference number: 5 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEASLPTS*WSPALQ
Trigger: CTGAAGTGCAGGAGACCACAAGGATGTTGGAAGACT...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS CCA 90 bp GCCAATGGGCCATGGGCTGCCCGGGTGGTAGAGATGACTGCGAGCTaGAGAAGCGAGGCTGCTGGAGTGGAAATGATGGTGAGGGTTATC +
Preference number: 5 (lower is better)
Translates to: ANGPWAARVVEMTAS*RSEAAGVEMMVRVI
Trigger: GATAACCCTCACCATCATTTCCACTCCAGCAGCCTCGCTTCTCCAGCTCGCAGTCATCTCTACCACCCGGGCAGCCCATGGCCCATTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS-3UTR CAA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATAGCGCCGCGGAGCCCTaGCCTCCTTCCCTCCCGCGC +
Preference number: 5 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHSAAEP*PPSLPR
Trigger: GCGCGGGAGGGAAGGAGGCAAGGGCTCCGCGGCGCT...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCCTTCAGGAATTCAGGTaGAGCTTGCACTGTAAGCTC +
Preference number: 5 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSLQEFR*SLHCKL
Trigger: GAGCTTACAGTGCAAGCTCAACCTGAATTCCTGAAG...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCAGTAATCTGCCCATTTaGTGTGGCTGGAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPSNLPI*CGWSRW
Trigger: CCACCTGCTCCAGCCACACAAAATGGGCAGATTACT...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCACAACAGTCACATCCTaGGGTGGAGAAGTCGGAACT +
Preference number: 5 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCTTVTS*GGEVGT
Trigger: AGTTCCGACTTCTCCACCCAAGGATGTGACTGTTGT...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS CCA 90 bp TATATAGGGCCTCAGAGGAAACCGAAAGGCCTCCGGGAGGAAACCTaGGTGCGCAGTGGGTCGGCCCGGGGATTTATGTGCTCGCCAAAA +
Preference number: 5 (lower is better)
Translates to: YIGPQRKPKGLREET*VRSGSARGFMCSPK
Trigger: TTTTGGCGAGCACATAAATCCCCGGGCCGACCCACTGCGCACCCAGGTTTCCTCCCGGAGGCCTTTCGGTTTCCTCTGAGGCCCTATATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS CCA 90 bp GACCAGCAGTCTCAGGCCCTGGGGCATGTTCCCAGGCAATCTGGCTaGACTGATGGCCCCACGAACTTACACTCTCGGAGTCTTCCAACA +
Preference number: 5 (lower is better)
Translates to: DQQSQALGHVPRQSG*TDGPTNLHSRSLPT
Trigger: TGTTGGAAGACTCCGAGAGTGTAAGTTCGTGGGGCCATCAGTCCAGCCAGATTGCCTGGGAACATGCCCCAGGGCCTGAGACTGCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558886.1
CDS-3UTR CAA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGCCGCGGAGCCCTaGCCTCCTTCCCTCCCGCGC +
Preference number: 5 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLSAAEP*PPSLPR
Trigger: GCGCGGGAGGGAAGGAGGCAAGGGCTCCGCGGCGCT...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGATGCTTGGGCAGCGAGTaGTCTGCCCACGTAATCCTG +
Preference number: 5 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRCLGSE*SAHVIL
Trigger: CAGGATTACGTGGGCAGACAACTCGCTGCCCAAGCA...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCTGTTACTGCCGCTCATaGGAGGTTTGTAGTCGGATC +
Preference number: 5 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPCYCRS*EVCSRI
Trigger: GATCCGACTACAAACCTCCAATGAGCGGCAGTAACA...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCACACCAAGGACTTCCTaGGTTTTGGATGGCGTTTTT +
Preference number: 5 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSTPRTS*VLDGVF
Trigger: AAAAACGCCATCCAAAACCAAGGAAGTCCTTGGTGT...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCGCAGCTGATCTCTTCTaGGCTATAGAACTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPAADLF*AIELKP
Trigger: GGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGC...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS TCA 90 bp GATGAAGCGGGTAGAGACCAGGGAGGCCACGACATCCCGAGGAGCTaGAGGCAGTGGTCCCGTTGTGGCTGGTGCATGTTCAAGGATTAT +
Preference number: 5 (lower is better)
Translates to: DEAGRDQGGHDIPRS*RQWSRCGWCMFKDY
Trigger: ATAATCCTTGAACATGCACCAGCCACAACGGGACCACTGCCTTCAGCTCCTCGGGATGTCGTGGCCTCCCTGGTCTCTACCCGCTTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
CDS TCA 90 bp GCAGTCTCAGGCCCTGGGGCATGTTCCCAGGCAATCTGGCTGGACTaGTGGCCCCACGAACTTACACTCTCGGAGTCTTCCAACATCCTT +
Preference number: 5 (lower is better)
Translates to: AVSGPGACSQAIWLD*WPHELTLSESSNIL
Trigger: AAGGATGTTGGAAGACTCCGAGAGTGTAAGTTCGTGGGGCCATCAGTCCAGCCAGATTGCCTGGGAACATGCCCCAGGGCCTGAGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558886.1
CDS GCA 90 bp GAACGGATTCTGTGGAATTGGCCCTGTCTGAAAGGGACATGGATGTaGCAATGGGCCATGGGCTGCCCGGGTGGTAGAGATGACTGCGAG +
Preference number: 5 (lower is better)
Translates to: ERILWNWPCLKGTWM*QWAMGCPGGRDDCE
Trigger: CTCGCAGTCATCTCTACCACCCGGGCAGCCCATGGCCCATTGGCACATCCATGTCCCTTTCAGACAGGGCCAATTCCACAGAATCCGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS CCA 90 bp ATTCTGTGGAATTGGCCCTGTCTGAAAGGGACATGGATGTGCCAATaGGCCATGGGCTGCCCGGGTGGTAGAGATGACTGCGAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: ILWNWPCLKGTWMCQ*AMGCPGGRDDCELE
Trigger: CTCCAGCTCGCAGTCATCTCTACCACCCGGGCAGCCCATGGCCCATTGGCACATCCATGTCCCTTTCAGACAGGGCCAATTCCACAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS CCA 90 bp TCAGAGGAAACCGAAAGGCCTCCGGGAGGAAACCTGGGTGCGCAGTaGGTCGGCCCGGGGATTTATGTGCTCGCCAAAAACAATAGCGAT +
Preference number: 5 (lower is better)
Translates to: SEETERPPGGNLGAQ*VGPGIYVLAKNNSD
Trigger: ATCGCTATTGTTTTTGGCGAGCACATAAATCCCCGGGCCGACCCACTGCGCACCCAGGTTTCCTCCCGGAGGCCTTTCGGTTTCCTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS CCA 90 bp TCCCGAGGAGCTGAAGGCAGTGGTCCCGTTGTGGCTGGTGCTAGATaGTCAGTAGTGGCACTGGTCAGTGAAGTGGGAGGTAATGTTGGG +
Preference number: 5 (lower is better)
Translates to: SRGAEGSGPVVAGAR*SVVALVSEVGGNVG
Trigger: CCCAACATTACCTCCCACTTCACTGACCAGTGCCACTACTGACCATCTAGCACCAGCCACAACGGGACCACTGCCTTCAGCTCCTCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS-3UTR CAA 90 bp AGCAGCCCTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCCCTTCATCAGGTTTATaGTGTTTGGAATGCACCACA +
Preference number: 5 (lower is better)
Translates to: SSPLGPSHRQCGDRHRCSPSSGL*CLECTT
Trigger: TGTGGTGCATTCCAAACACAATAAACCTGATGAAGG...GGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCGTTGCATTTGCATTCTaGTACTTGGTGTTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCVAFAF*YLVFAG
Trigger: CCCAGCAAACACCAAGTACAAGAATGCAAATGCAAC...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCGAGCCATTCACTGATTaGCAGGCAGCTCGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPEPFTD*QAARFF
Trigger: AAAGAAACGAGCTGCCTGCAAATCAGTGAATGGCTC...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCAACTGGTGTGATATCTaGAGAGTTGCGAGGAATTGG +
Preference number: 5 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCNWCDI*RVARNW
Trigger: CCAATTCCTCGCAACTCTCAAGATATCACACCAGTT...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAGGTGGGCCATCTCTTaGGTCAGCTCATCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: GPWCPVLQNISRQREAASRWAIS*VSSSGS
Trigger: TGAACCAGATGAGCTGACCAAAGAGATGGCCCACCT...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGGATCCCGCCCGACTCTaGCTGGGCCCTGGCGCGGCT +
Preference number: 5 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLDPARL*LGPGAA
Trigger: AGCCGCGCCAGGGCCCAGCAAGAGTCGGGCGGGATC...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS GCA 90 bp CACGAACTTACACTCTCGGAGTCTTCCAACATCCTTGTGGTCTCCTaGACTTCAGGGGCACTGGGAACAACCACTGGCATAGGAGGCCGG +
Preference number: 5 (lower is better)
Translates to: HELTLSESSNILVVS*TSGALGTTTGIGGR
Trigger: CCGGCCTCCTATGCCAGTGGTTGTTCCCAGTGCCCCTGAAGTGCAGGAGACCACAAGGATGTTGGAAGACTCCGAGAGTGTAAGTTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558886.1
CDS CCA 90 bp TGCCCGGGTGGTAGAGATGACTGCGAGCTGGAGAAGCGAGGCTGCTaGAGTGGAAATGATGGTGAGGGTTATCGAGGGAATGGATGGGAT +
Preference number: 5 (lower is better)
Translates to: CPGGRDDCELEKRGC*SGNDGEGYRGNGWD
Trigger: ATCCCATCCATTCCCTCGATAACCCTCACCATCATTTCCACTCCAGCAGCCTCGCTTCTCCAGCTCGCAGTCATCTCTACCACCCGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS CCA 90 bp CAGTGCAGCATGTTTGAGACGAAGAGGCTGGCATGGTGTCAGTGCTaGGGGTATTTCGAACGGATTGCTGGGGTGGCTGGGAGTCAAAGG +
Preference number: 5 (lower is better)
Translates to: QCSMFETKRLAWCQC*GYFERIAGVAGSQR
Trigger: CCTTTGACTCCCAGCCACCCCAGCAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACATGCTGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560262.5
CDS CCA 90 bp GGTCCTGGTGATCAGTGCAGCATGTTTGAGACGAAGAGGCTGGCATaGTGTCAGTGCTGGGGGTATTTCGAACGGATTGCTGGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: GPGDQCSMFETKRLA*CQCWGYFERIAGVA
Trigger: AGCCACCCCAGCAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACATGCTGCACTGATCACCAGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560262.5
CDS CCA 90 bp CCTGATGGTGTCATGACTCAGAATGGAAGCCTGAACTCCCACTGGTaGCATCATGGGAGTGGGATCTGGCACTGTGTGAGGCCTGGTCAC +
Preference number: 5 (lower is better)
Translates to: PDGVMTQNGSLNSHW*HHGSGIWHCVRPGH
Trigger: GTGACCAGGCCTCACACAGTGCCAGATCCCACTCCCATGATGCCACCAGTGGGAGTTCAGGCTTCCATTCTGAGTCATGACACCATCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS-3UTR CAA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCCACTGTAAGCTCTGCTaGAGCTTCAATTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCHCKLC*SFNCLI
Trigger: AATGAGACAATTGAAGCTCAAGCAGAGCTTACAGTG...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCGTTGCATTTGCATTCTaGTACTTGGTGTTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPVAFAF*YLVFAG
Trigger: CCCAGCAAACACCAAGTACAAGAATGCAAATGCAAC...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCCTTGATCTTCGACCTTaGGTCACCATCACAGAGAAT +
Preference number: 5 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPLDLRP*VTITEN
Trigger: ATTCTCTGTGATGGTGACCAAAGGTCGAAGATCAAG...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp GCTGACCAGGGGAAGGCAGGTGGCCATGCCTGGAGCCAGCCCTACACAGAGGCGACTCTGTACAATTCCTaGTTTTCAAGGGTAAGTTCC +
Preference number: 5 (lower is better)
Translates to: ADQGKAGGHAWSQPYTEATLYNS*FSRVSS
Trigger: GGAACTTACCCTTGAAAACAAGGAATTGTACAGAGT...CGCCTCTGTGTAGGGCTGGCTCCAGGCATGGCCACCTGCCTTCCCCTGGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS GCA 90 bp TGGTGTTTCCCACGTAACAGTGATGGAGGTAGGCGAAGCTGCATATaGACGAAGGTTAGGTGCTGGGCCAGGGAGCTGAACCTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: WCFPRNSDGGRRSCI*TKVRCWARELNLRL
Trigger: CAACCTGAGGTTCAGCTCCCTGGCCCAGCACCTAACCTTCGTGCATATGCAGCTTCGCCTACCTCCATCACTGTTACGTGGGAAACACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
ENST00000560352.5
CDS GCA 90 bp AGACACTGGTGTTTCCCACGTAACAGTGATGGAGGTAGGCGAAGCTaGATATGCACGAAGGTTAGGTGCTGGGCCAGGGAGCTGAACCTC +
Preference number: 5 (lower is better)
Translates to: RHWCFPRNSDGGRRS*ICTKVRCWARELNL
Trigger: GAGGTTCAGCTCCCTGGCCCAGCACCTAACCTTCGTGCATATGCAGCTTCGCCTACCTCCATCACTGTTACGTGGGAAACACCAGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
ENST00000560352.5
CDS GCA 90 bp GATCAGTGCAGCATGTTTGAGACGAAGAGGCTGGCATGGTGTCAGTaGTGGGGGTATTTCGAACGGATTGCTGGGGTGGCTGGGAGTCAA +
Preference number: 5 (lower is better)
Translates to: DQCSMFETKRLAWCQ*WGYFERIAGVAGSQ
Trigger: TTGACTCCCAGCCACCCCAGCAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACATGCTGCACTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560262.5
CDS CCA 90 bp TTCAGGGTCCTGGTGATCAGTGCAGCATGTTTGAGACGAAGAGGCTaGCATGGTGTCAGTGCTGGGGGTATTTCGAACGGATTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: FRVLVISAACLRRRG*HGVSAGGISNGLLG
Trigger: CCCCAGCAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACATGCTGCACTGATCACCAGGACCCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560262.5
CDS-3UTR CAA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGCTTCAGGAATTCAGGTaGAGCTTGCACTGTAAGCTC +
Preference number: 5 (lower is better)
Translates to: GPWCPVLQNISRQREAASLQEFR*SLHCKL
Trigger: GAGCTTACAGTGCAAGCTCAACCTGAATTCCTGAAG...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCGTCCGCCACGTCAATTaGATGAAGCGGGTAGAGACC +
Preference number: 5 (lower is better)
Translates to: QVALLASSLDTKFWPMVPVRHVN*MKRVET
Trigger: GGTCTCTACCCGCTTCATCAAATTGACGTGGCGGAC...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGTGCTTGGGCAGCGAGTaGTCTGCCCACGTAATCCTG +
Preference number: 5 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGECLGSE*SAHVIL
Trigger: CAGGATTACGTGGGCAGACAACTCGCTGCCCAAGCA...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTTGGGTCCCATGCCCTTaGAGTTCCGTGCCTGGATTT +
Preference number: 5 (lower is better)
Translates to: PVLQNISRQREAASTQASWVPCP*SSVPGF
Trigger: AAATCCAGGCACGGAACTCAAAGGGCATGGGACCCA...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS TCA 90 bp CAGCTCCGGTCTACAGCTTCCAGCGTGAGCGACGCAGAAGATGGGTaGTTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGG +
Preference number: 5 (lower is better)
Translates to: QLRSTASSVSDAEDG*FLHFHLRYRVHLTR
Trigger: CCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCATCTTCTGCGTCGCTCACGCTGGAAGCTGTAGACCGGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560407.1
CDS CCA 90 bp TATTTCGAACGGATTCTGTGGAATTGGCCCTGTCTGAAAGGGACATaGATGTGCCAATGGGCCATGGGCTGCCCGGGTGGTAGAGATGAC +
Preference number: 5 (lower is better)
Translates to: YFERILWNWPCLKGT*MCQWAMGCPGGRDD
Trigger: GTCATCTCTACCACCCGGGCAGCCCATGGCCCATTGGCACATCCATGTCCCTTTCAGACAGGGCCAATTCCACAGAATCCGTTCGAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS CCA 90 bp AATCCTGATGGTGTCATGACTCAGAATGGAAGCCTGAACTCCCACTaGTGGCATCATGGGAGTGGGATCTGGCACTGTGTGAGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: NPDGVMTQNGSLNSH*WHHGSGIWHCVRPG
Trigger: ACCAGGCCTCACACAGTGCCAGATCCCACTCCCATGATGCCACCAGTGGGAGTTCAGGCTTCCATTCTGAGTCATGACACCATCAGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS CCA 90 bp GGAACAGCTCCGGTCTACAGCTTCCAGCGTGAGCGACGCAGAAGATaGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCAC +
Preference number: 5 (lower is better)
Translates to: GTAPVYSFQRERRRR*VISAFPSEVPGSSH
Trigger: GTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCATCTTCTGCGTCGCTCACGCTGGAAGCTGTAGACCGGAGCTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560407.1
CDS-3UTR CAA 90 bp AATCCCGCCTGGCACCCCCATGTGACCAGCGAGCTCGGCAGCAGCAGTTCCTGCATTCCACTTGGAAGTTaGATAACTCTATCATCCAGA +
Preference number: 5 (lower is better)
Translates to: NPAWHPHVTSELGSSSSCIPLGS*ITLSSR
Trigger: TCTGGATGATAGAGTTATCAAACTTCCAAGTGGAAT...GCAGGAACTGCTGCTGCCGAGCTCGCTGGTCACATGGGGGTGCCAGGCGGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAGAATTCAGGTTGAGCTaGCACTGTAAGCTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: AHGAQSCRISAGKGKLPREFRLS*HCKLCL
Trigger: CAAGCAGAGCTTACAGTGCAAGCTCAACCTGAATTC...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACTTCAGGAATTCAGGTaGAGCTTGCACTGTAAGCTC +
Preference number: 5 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRLQEFR*SLHCKL
Trigger: GAGCTTACAGTGCAAGCTCAACCTGAATTCCTGAAG...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACAGTTGGGCTCCAGCTaGTGCATTTCCAACATCATT +
Preference number: 5 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRQLGSS*CISNII
Trigger: AATGATGTTGGAAATGCACAAGCTGGAGCCCAACTG...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGTTCAAGGATTATCAGTaGGGCTCCAGCTTGTGCATT +
Preference number: 5 (lower is better)
Translates to: GPWCPVLQNISRQREAASFKDYQ*GSSLCI
Trigger: AATGCACAAGCTGGAGCCCAACTGATAATCCTTGAA...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGGTTTTGAATGGTTACTaGCATCTCTCCTGGGTGACT +
Preference number: 5 (lower is better)
Translates to: GPWCPVLQNISRQREAASVLNGY*HLSWVT
Trigger: AGTCACCCAGGAGAGATGCAAGTAACCATTCAAAAC...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTGAGCTGAACCTCAGGTaGTGTTTCTACTCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: PVLQNISRQREAASTQASELNLR*CFYSQW
Trigger: CCACTGCGAGTAGAAACACAACCTGAGGTTCAGCTC...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTGCCGGGCCTGTACCATaGATTGTTAGAGCAGCCACT +
Preference number: 5 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPAGPVP*IVRAAT
Trigger: AGTGGCTGCTCTAACAATCAATGGTACAGGCCCGGC...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGGCCGGGCCTGTACCATaGATTGTTAGAGCAGCCACT +
Preference number: 5 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEAGPVP*IVRAAT
Trigger: AGTGGCTGCTCTAACAATCAATGGTACAGGCCCGGC...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTGTGTTTGCTGGGATGTaGGTTTTCCATCGGACGGTG +
Preference number: 5 (lower is better)
Translates to: PVLQNISRQREAASTQASVFAGM*VFHRTV
Trigger: CACCGTCCGATGGAAAACCAACATCCCAGCAAACAC...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCAGTCTTCCAACATCCTaGTGGTCTCCTGCACTTCAG +
Preference number: 5 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGSLPTS*WSPALQ
Trigger: CTGAAGTGCAGGAGACCACAAGGATGTTGGAAGACT...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGTCAAATGTCAACCACTaGTGGAGAACACCAAGGACT +
Preference number: 5 (lower is better)
Translates to: GPWCPVLQNISRQREAASSNVNH*WRTPRT
Trigger: AGTCCTTGGTGTTCTCCACAAGTGGTTGACATTTGA...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTCTGGGCCCCTCCCACAGGCAGTGCGGCGACAGACACAGGTGTTCCAAATCCCCAAATCAAACTCCAGTaGCAACGTAGTGACAATAAG +
Preference number: 5 (lower is better)
Translates to: LWAPPTGSAATDTGVPNPQIKLQ*QRSDNK
Trigger: CTTATTGTCACTACGTTGCAACTGGAGTTTGATTTG...GGGATTTGGAACACCTGTGTCTGTCGCCGCACTGCCTGTGGGAGGGGCCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTAGAAGCAGTCAGGGTTaGTGGGAGGAAATGCCCCAA +
Preference number: 5 (lower is better)
Translates to: PVLQNISRQREAASTQASRSSQG*WEEMPQ
Trigger: TTGGGGCATTTCCTCCCACAAACCCTGACTGCTTCT...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS TCA 90 bp GGAGGAGTCCAGCTCACTACGATGCTAGTAACGAGCGGGCGTACGTaGAGAGAGCTAGGCACTTCAGGAACACGAGTTTCATCTAGGTCA +
Preference number: 5 (lower is better)
Translates to: GGVQLTTMLVTSGRT*RELGTSGTRVSSRS
Trigger: TGACCTAGATGAAACTCGTGTTCCTGAAGTGCCTAGCTCTCTTCACGTACGCCCGCTCGTTACTAGCATCGTAGTGAGCTGGACTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS GCA 90 bp GATCAGTGCAGCATGTTTGAGACGAAGAGGCTGGCATGGTGTCAGTaGTGGGGGTATTTCGAACGGATTCTGTGGAATTGGCCCTGTCTG +
Preference number: 5 (lower is better)
Translates to: DQCSMFETKRLAWCQ*WGYFERILWNWPCL
Trigger: CAGACAGGGCCAATTCCACAGAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACATGCTGCACTGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS CCA 90 bp CCTGATGGTGTCATGACTCAGAATGGAAGCCTGAACTCCCACTGGTaGCATCATGGGAGTGGGATCTGGCACTGGAGTGTATGGAGCATT +
Preference number: 5 (lower is better)
Translates to: PDGVMTQNGSLNSHW*HHGSGIWHWSVWSI
Trigger: AATGCTCCATACACTCCAGTGCCAGATCCCACTCCCATGATGCCACCAGTGGGAGTTCAGGCTTCCATTCTGAGTCATGACACCATCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
CDS CCA 90 bp AATCCTGATGGTGTCATGACTCAGAATGGAAGCCTGAACTCCCACTaGTGGCATCATGGGAGTGGGATCTGGCACTGGAGTGTATGGAGC +
Preference number: 5 (lower is better)
Translates to: NPDGVMTQNGSLNSH*WHHGSGIWHWSVWS
Trigger: GCTCCATACACTCCAGTGCCAGATCCCACTCCCATGATGCCACCAGTGGGAGTTCAGGCTTCCATTCTGAGTCATGACACCATCAGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
CDS CCA 90 bp GGTCCTGGTGATCAGTGCAGCATGTTTGAGACGAAGAGGCTGGCATaGTGTCAGTGCTGGGGGTATTTCGAACGGATTCTGTGGAATTGG +
Preference number: 5 (lower is better)
Translates to: GPGDQCSMFETKRLA*CQCWGYFERILWNW
Trigger: CCAATTCCACAGAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACATGCTGCACTGATCACCAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS CCA 90 bp TTCAGGGTCCTGGTGATCAGTGCAGCATGTTTGAGACGAAGAGGCTaGCATGGTGTCAGTGCTGGGGGTATTTCGAACGGATTCTGTGGA +
Preference number: 5 (lower is better)
Translates to: FRVLVISAACLRRRG*HGVSAGGISNGFCG
Trigger: TCCACAGAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACATGCTGCACTGATCACCAGGACCCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS CCA 90 bp AACGGATTGCTGGGGTGGCTGGGAGTCAAAGGGCATCATCATTTTTaGTCTCATTCCTCGCCTTCCAGCCAGTGTAGACATGCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: NGLLGWLGVKGHHHF*SHSSPSSQCRHAVL
Trigger: GAGGACAGCATGTCTACACTGGCTGGAAGGCGAGGAATGAGACCAAAAATGATGATGCCCTTTGACTCCCAGCCACCCCAGCAATCCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560262.5
CDS CCA 90 bp GGTCCTGGTGATCAGTGCAGCATGTTTGAGACGAAGAGGCTGGCATaGTGTCAGTGCTGGGGGTATTTCGAACGGATTCTACAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: GPGDQCSMFETKRLA*CQCWGYFERILQQE
Trigger: TTCCTGCTGTAGAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACATGCTGCACTGATCACCAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558886.1
CDS CCA 90 bp TTCAGGGTCCTGGTGATCAGTGCAGCATGTTTGAGACGAAGAGGCTaGCATGGTGTCAGTGCTGGGGGTATTTCGAACGGATTCTACAGC +
Preference number: 5 (lower is better)
Translates to: FRVLVISAACLRRRG*HGVSAGGISNGFYS
Trigger: GCTGTAGAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACATGCTGCACTGATCACCAGGACCCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558886.1
CDS-3UTR CAA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGGTGTTTGCTGGGATGTaGGTTTTCCATCGGACGGTG +
Preference number: 5 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEVFAGM*VFHRTV
Trigger: CACCGTCCGATGGAAAACCAACATCCCAGCAAACAC...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCAGTCTTCCAACATCCTaGTGGTCTCCTGCACTTCAG +
Preference number: 5 (lower is better)
Translates to: QVALLASSLDTKFWPMVPSLPTS*WSPALQ
Trigger: CTGAAGTGCAGGAGACCACAAGGATGTTGGAAGACT...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCAAAGTGAAATGCAGGTaGCACTTCTCGCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: QVALLASSLDTKFWPMVPKVKCR*HFSPLP
Trigger: GGGAAGAGGCGAGAAGTGCAACCTGCATTTCACTTT...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGATCAAATGTCAACCACTaGTGGAGAACACCAAGGACT +
Preference number: 5 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRSNVNH*WRTPRT
Trigger: AGTCCTTGGTGTTCTCCACAAGTGGTTGACATTTGA...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS TCA 90 bp CTTCAATCAGCTGAGACAGCTGTGTCCCGCTTACCAAGGTCTCAGTaGCATCACTCTTTCGGGAGGCCTTTCGGTAGCGAATCTTGTAGC +
Preference number: 5 (lower is better)
Translates to: LQSAETAVSRLPRSQ*HHSFGRPFGSESCS
Trigger: GCTACAAGATTCGCTACCGAAAGGCCTCCCGAAAGAGTGATGTCACTGAGACCTTGGTAAGCGGGACACAGCTGTCTCAGCTGATTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558807.1
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS GCA 90 bp GTATCGGGAGTCTGTAATCTTCTGGTGCTTGGGCAGCGAGTTGTCTaGCCACGTAATCCTGATGGTGTCATGACTCAGAATGGAAGCCTG +
Preference number: 5 (lower is better)
Translates to: VSGVCNLLVLGQRVV*PRNPDGVMTQNGSL
Trigger: CAGGCTTCCATTCTGAGTCATGACACCATCAGGATTACGTGGGCAGACAACTCGCTGCCCAAGCACCAGAAGATTACAGACTCCCGATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS CCA 90 bp GCCATAACCAATGGCGTAACCTCTGACCACAATGTTCTGATTCTCTaGAGGAGTCCAGCTCACTACGATGCTAGTAACGAGCGGGCGTAC +
Preference number: 5 (lower is better)
Translates to: AITNGVTSDHNVLIL*RSPAHYDASNERAY
Trigger: GTACGCCCGCTCGTTACTAGCATCGTAGTGAGCTGGACTCCTCCAGAGAATCAGAACATTGTGGTCAGAGGTTACGCCATTGGTTATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS CCA 90 bp CAGTGCAGCATGTTTGAGACGAAGAGGCTGGCATGGTGTCAGTGCTaGGGGTATTTCGAACGGATTCTGTGGAATTGGCCCTGTCTGAAA +
Preference number: 5 (lower is better)
Translates to: QCSMFETKRLAWCQC*GYFERILWNWPCLK
Trigger: TTTCAGACAGGGCCAATTCCACAGAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACATGCTGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS-3UTR CAA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCACTTCACAGTTGGAGTaGGTTTTCCAGTCACTTCAC +
Preference number: 5 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGTSQLE*VFQSLH
Trigger: GTGAAGTGACTGGAAAACCAACTCCAACTGTGAAGT...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGACAACAGTCACATCCTaGGGTGGAGAAGTCGGAACT +
Preference number: 5 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGETTVTS*GGEVGT
Trigger: AGTTCCGACTTCTCCACCCAAGGATGTGACTGTTGT...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTGAGCCATTCACTGATTaGCAGGCAGCTCGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: PVLQNISRQREAASTQASEPFTD*QAARFF
Trigger: AAAGAAACGAGCTGCCTGCAAATCAGTGAATGGCTC...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGACGGATTCTGTGGAATaGGCCCTGTCTGAAAGGGAC +
Preference number: 5 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGTDSVE*ALSERD
Trigger: GTCCCTTTCAGACAGGGCCAATTCCACAGAATCCGT...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGGTCCTGGAGGCGGGATaGCTGGCACGGCGAAGCTCT +
Preference number: 5 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQVLEAG*LARRSS
Trigger: AGAGCTTCGCCGTGCCAGCAATCCCGCCTCCAGGAC...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAGTCCTGGAGGCGGGATaGCTGGCACGGCGAAGCTCT +
Preference number: 5 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQVLEAG*LARRSS
Trigger: AGAGCTTCGCCGTGCCAGCAATCCCGCCTCCAGGAC...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGAAAGTGAAATGCAGGTaGCACTTCTCGCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEKVKCR*HFSPLP
Trigger: GGGAAGAGGCGAGAAGTGCAACCTGCATTTCACTTT...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp GGCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAGGACTTCCTTGGTTTaGGATGGCGTTTTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: GPWCPVLQNISRQREAASRTSLV*DGVFVF
Trigger: AAAAACAAAAACGCCATCCAAAACCAAGGAAGTCCT...CGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCACACCAAGGACTTCCTaGGTTTTGGATGGCGTTTTT +
Preference number: 5 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGTPRTS*VLDGVF
Trigger: AAAAACGCCATCCAAAACCAAGGAAGTCCTTGGTGT...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS TCA 90 bp CTTGGTGTAGAACACAGAGTAGGTAAGGTTGTCTCCGTGAGGATCTaGTGCAGGTGTCCGCCACGTCAATTTGATGAAGCGGGTAGAGAC +
Preference number: 5 (lower is better)
Translates to: LGVEHRVGKVVSVRI*CRCPPRQFDEAGRD
Trigger: GTCTCTACCCGCTTCATCAAATTGACGTGGCGGACACCTGCATCAGATCCTCACGGAGACAACCTTACCTACTCTGTGTTCTACACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
ENST00000560352.5
ENST00000560407.1
CDS-3UTR CAA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCCACTGTAAGCTCTGCTaGAGCTTCAATTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGHCKLC*SFNCLI
Trigger: AATGAGACAATTGAAGCTCAAGCAGAGCTTACAGTG...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCCAGTTGGGCTCCAGCTaGTGCATTTCCAACATCATT +
Preference number: 5 (lower is better)
Translates to: LFRISLSALVFQNPAWHPQLGSS*CISNII
Trigger: AATGATGTTGGAAATGCACAAGCTGGAGCCCAACTG...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTATGCTTGGGCAGCGAGTaGTCTGCCCACGTAATCCTG +
Preference number: 5 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELCLGSE*SAHVIL
Trigger: CAGGATTACGTGGGCAGACAACTCGCTGCCCAAGCA...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCCTTGATCTTCGACCTTaGGTCACCATCACAGAGAAT +
Preference number: 5 (lower is better)
Translates to: QVALLASSLDTKFWPMVPLDLRP*VTITEN
Trigger: ATTCTCTGTGATGGTGACCAAAGGTCGAAGATCAAG...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCAACTGGTGTGATATCTaGAGAGTTGCGAGGAATTGG +
Preference number: 5 (lower is better)
Translates to: QVALLASSLDTKFWPMVPNWCDI*RVARNW
Trigger: CCAATTCCTCGCAACTCTCAAGATATCACACCAGTT...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTACAGTAATGGTGTGCTaGGCAATGCAGGATCATAGG +
Preference number: 5 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPTVMVC*AMQDHR
Trigger: CCTATGATCCTGCATTGCCAAGCACACCATTACTGT...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp GCCCATGGTGCCCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGAAGGACTTCCTTGGTTTaGGATGGCGTTTTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: AHGAQSCRISAGKGKLPRRTSLV*DGVFVF
Trigger: AAAAACAAAAACGCCATCCAAAACCAAGGAAGTCCT...TCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGGGCACCATGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCGCAGCTGATCTCTTCTaGGCTATAGAACTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFAADLF*AIELKP
Trigger: GGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGC...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS TCA 90 bp CAAAAGTTTCAGCAGACAGCCAGTCAGTTGCCGGGCCTGTACCATTaGTTGTTAGAGCAGCCACTCGGAAATTATACTCAGTCCCCCGAT +
Preference number: 5 (lower is better)
Translates to: QKFQQTASQLPGLYH*LLEQPLGNYTQSPD
Trigger: ATCGGGGGACTGAGTATAATTTCCGAGTGGCTGCTCTAACAATCAATGGTACAGGCCCGGCAACTGACTGGCTGTCTGCTGAAACTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558807.1
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS GCA 90 bp CCCAGCATCATCCTCAGTAACATCACTGATCTCCAGGCTACCACCTaGCAGCAATACCAATCTTTCAGAGCTTTCTGTGTCAAGTGCCTC +
Preference number: 5 (lower is better)
Translates to: PSIILSNITDLQATT*QQYQSFRAFCVKCL
Trigger: GAGGCACTTGACACAGAAAGCTCTGAAAGATTGGTATTGCTGGCAGGTGGTAGCCTGGAGATCAGTGATGTTACTGAGGATGATGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
CDS-3UTR CAA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGACCATATCCCCATTTTaGACCCACTTCACAGTTGGA +
Preference number: 5 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGETISPF*THFTVG
Trigger: TCCAACTGTGAAGTGGGTCAAAAATGGGGATATGGT...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGTTCAAGGATTATCAGTaGGGCTCCAGCTTGTGCATT +
Preference number: 5 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGEFKDYQ*GSSLCI
Trigger: AATGCACAAGCTGGAGCCCAACTGATAATCCTTGAA...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGGTCCGCCACGTCAATTaGATGAAGCGGGTAGAGACC +
Preference number: 5 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLVRHVN*MKRVET
Trigger: GGTCTCTACCCGCTTCATCAAATTGACGTGGCGGAC...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGAGCGGCTGGGTTCACCTGTTGCATTTGCATTCTaGTACTTGGTGTTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: NYVQRQWLPCVAERLGSPVAFAF*YLVFAG
Trigger: CCCAGCAAACACCAAGTACAAGAATGCAAATGCAAC...AGGTGAACCCAGCCGCTCAGCCACACATGGAAGCCATTGCCTTTGCACATAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCTTGCTGTCCATGGAGTaGTCAACTGGTGTGATATCT +
Preference number: 5 (lower is better)
Translates to: LFRISLSALVFQNPAWHPLLSME*STGVIS
Trigger: AGATATCACACCAGTTGACAACTCCATGGACAGCAA...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCAGGGCATCATCATTTTaGGTCTCATTCCTCGCCTTC +
Preference number: 5 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFRASSF*VSFLAF
Trigger: GAAGGCGAGGAATGAGACCAAAAATGATGATGCCCT...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATACGGATTCTGTGGAATaGGCCCTGTCTGAAAGGGAC +
Preference number: 5 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHTDSVE*ALSERD
Trigger: GTCCCTTTCAGACAGGGCCAATTCCACAGAATCCGT...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTCCTGGACACAAAATTTaGGCCCATGGTGCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLPGHKI*AHGAQS
Trigger: GGACTGGGCACCATGGGCCAAAATTTTGTGTCCAGG...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCACACCAAGGACTTCCTaGGTTTTGGATGGCGTTTTT +
Preference number: 5 (lower is better)
Translates to: LFRISLSALVFQNPAWHPTPRTS*VLDGVF
Trigger: AAAAACGCCATCCAAAACCAAGGAAGTCCTTGGTGT...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS TCA 90 bp AATCCATTCCAGCAGCCTCGATGCAATACAGGAACAACAGCAGCGTaGTGCACTAAAGTTCACAGACTTGAGCCATATCCACCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: NPFQQPRCNTGTTAA*CTKVHRLEPYPPQV
Trigger: GACTTGGGGTGGATATGGCTCAAGTCTGTGAACTTTAGTGCATCACGCTGCTGTTGTTCCTGTATTGCATCGAGGCTGCTGGAATGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558807.1
CDS GCA 90 bp GATCAGTGCAGCATGTTTGAGACGAAGAGGCTGGCATGGTGTCAGTaGTGGGGGTATTTCGAACGGATTCTACAGCAGGAAAGTCTAAAT +
Preference number: 5 (lower is better)
Translates to: DQCSMFETKRLAWCQ*WGYFERILQQESLN
Trigger: ATTTAGACTTTCCTGCTGTAGAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACATGCTGCACTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558886.1
CDS CCA 90 bp AGGATCTGGAAGAACCTTCAATTCAACTTCATCACTATACTTTGGTaGCCCACCACTTTCCACTACGCAGCGATAAAGCCCGCCATCTCC +
Preference number: 5 (lower is better)
Translates to: RIWKNLQFNFITILW*PTTFHYAAIKPAIS
Trigger: GGAGATGGCGGGCTTTATCGCTGCGTAGTGGAAAGTGGTGGGCCACCAAAGTATAGTGATGAAGTTGAATTGAAGGTTCTTCCAGATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558485.1
ENST00000558964.5
ENST00000560262.5
CDS CCA 90 bp CTCAGGATCTGGAAGAACCTTCAATTCAACTTCATCACTATACTTTaGTGGCCCACCACTTTCCACTACGCAGCGATAAAGCCCGCCATC +
Preference number: 5 (lower is better)
Translates to: LRIWKNLQFNFITIL*WPTTFHYAAIKPAI
Trigger: GATGGCGGGCTTTATCGCTGCGTAGTGGAAAGTGGTGGGCCACCAAAGTATAGTGATGAAGTTGAATTGAAGGTTCTTCCAGATCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558485.1
ENST00000558964.5
ENST00000560262.5
CDS CCA 90 bp CAGCACTGGGAACATCTGACAATGTTCGAACAGCAACATCTGGTGTaGAAACTCCAGGACCATGTTTATTGTAGGCCACCACTCGGAAAC +
Preference number: 5 (lower is better)
Translates to: QHWEHLTMFEQQHLV*KLQDHVYCRPPLGN
Trigger: GTTTCCGAGTGGTGGCCTACAATAAACATGGTCCTGGAGTTTCCACACCAGATGTTGCTGTTCGAACATTGTCAGATGTTCCCAGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS CCA 90 bp CAGTGCAGCATGTTTGAGACGAAGAGGCTGGCATGGTGTCAGTGCTaGGGGTATTTCGAACGGATTCTACAGCAGGAAAGTCTAAATGTT +
Preference number: 5 (lower is better)
Translates to: QCSMFETKRLAWCQC*GYFERILQQESLNV
Trigger: AACATTTAGACTTTCCTGCTGTAGAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACATGCTGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558886.1
CDS-3UTR CAA 90 bp ACAGAAAAGGCCAAACAAGTGTGTACAGACGCCAGTCCCAGCAGCCCTCTGGGCTTGGAATGCACCACATaGCTGATAAATAAAGATCCA +
Preference number: 5 (lower is better)
Translates to: TEKAKQVCTDASPSSPLGLECTT*LINKDP
Trigger: TGGATCTTTATTTATCAGCAATGTGGTGCATTCCAA...GCCCAGAGGGCTGCTGGGACTGGCGTCTGTACACACTTGTTTGGCCTTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp CCAGTCCTGCAGAATATCAGCAGGCAAAGGGAAGCTGCCTCGACACAGGCTTCTCACCAGACCCAAAACTaGAAGATTATGTTCCTTTAC +
Preference number: 5 (lower is better)
Translates to: PVLQNISRQREAASTQASHQTQN*KIMFLY
Trigger: GTAAAGGAACATAATCTTCAAGTTTTGGGTCTGGTG...AGAAGCCTGTGTCGAGGCAGCTTCCCTTTGCCTGCTGATATTCTGCAGGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTAGTGTTTGCTGGGATGTaGGTTTTCCATCGGACGGTG +
Preference number: 5 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELVFAGM*VFHRTV
Trigger: CACCGTCCGATGGAAAACCAACATCCCAGCAAACAC...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCTTTGCATTCTTGTACTaGGTGTTTGCTGGGATGTTG +
Preference number: 5 (lower is better)
Translates to: LFRISLSALVFQNPAWHPFAFLY*VFAGML
Trigger: CAACATCCCAGCAAACACCAAGTACAAGAATGCAAA...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATACAACAGTCACATCCTaGGGTGGAGAAGTCGGAACT +
Preference number: 5 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHTTVTS*GGEVGT
Trigger: AGTTCCGACTTCTCCACCCAAGGATGTGACTGTTGT...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGTTGCTGTCCATGGAGTaGTCAACTGGTGTGATATCT +
Preference number: 5 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGLLSME*STGVIS
Trigger: AGATATCACACCAGTTGACAACTCCATGGACAGCAA...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTAAGGTGGGCCATCTCTTaGGTCAGCTCATCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: LVVSAADLFLAIELKPDLRWAIS*VSSSGS
Trigger: TGAACCAGATGAGCTGACCAAAGAGATGGCCCACCT...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTTCCAGACTCAGGTTaGAAGTCAGGTCCTGGTGAA +
Preference number: 5 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHLPDSG*KSGPGE
Trigger: TTCACCAGGACCTGACTTCAAACCTGAGTCTGGAAG...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CAGGTTGCACTTCTCGCCTCTTCCCTGGACACAAAATTTTGGCCCATGGTGCCCAAAGGGTCTCCATCCTaGCTTTCTGATTTACAGAAT +
Preference number: 5 (lower is better)
Translates to: QVALLASSLDTKFWPMVPKGSPS*LSDLQN
Trigger: ATTCTGTAAATCAGAAAGCAAGGATGGAGACCCTTT...GGGCACCATGGGCCAAAATTTTGTGTCCAGGGAAGAGGCGAGAAGTGCAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS TCA 90 bp AGGTGTTCTGAATTGGACAGCTTCAGACATGGGTCCCATGCCCTTTaGGTTCCGTGCCTGGATTTTGAAGTAGTATGGTGTGTCAAGAGT +
Preference number: 5 (lower is better)
Translates to: RCSELDSFRHGSHAL*VPCLDFEVVWCVKS
Trigger: ACTCTTGACACACCATACTACTTCAAAATCCAGGCACGGAACTCAAAGGGCATGGGACCCATGTCTGAAGCTGTCCAATTCAGAACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTATCCAGAAGAAGGGGTaGTCTGTTCTGTTCCCACCT +
Preference number: 5 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLIQKKG*SVLFPP
Trigger: AGGTGGGAACAGAACAGACAACCCCTTCTTCTGGAT...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCCTGCTTGAGCTTCAATaGTCTCATTTCCATTATCAG +
Preference number: 5 (lower is better)
Translates to: LFRISLSALVFQNPAWHPLLELQ*SHFHYQ
Trigger: CTGATAATGGAAATGAGACAATTGAAGCTCAAGCAG...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCCACTGTAAGCTCTGCTaGAGCTTCAATTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFHCKLC*SFNCLI
Trigger: AATGAGACAATTGAAGCTCAAGCAGAGCTTACAGTG...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAAGGCAGTGGTCCCGTaGTGGCTGGTGCATGTTCAA +
Preference number: 5 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQKAVVP*WLVHVQ
Trigger: TTGAACATGCACCAGCCACAACGGGACCACTGCCTT...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCTGGTGTAAGAGTGACTaGAAACATCAACATCCTGTT +
Preference number: 5 (lower is better)
Translates to: LFRISLSALVFQNPAWHPWCKSD*KHQHPV
Trigger: AACAGGATGTTGATGTTTCAAGTCACTCTTACACCA...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAGCCGGGCCTGTACCATaGATTGTTAGAGCAGCCACT +
Preference number: 5 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQAGPVP*IVRAAT
Trigger: AGTGGCTGCTCTAACAATCAATGGTACAGGCCCGGC...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAGTAATCTTCTGGTGCTaGGGCAGCGAGTTGTCTGCC +
Preference number: 5 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQVIFWC*GSELSA
Trigger: GGCAGACAACTCGCTGCCCAAGCACCAGAAGATTAC...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAATGGGTCCCATGCCCTTaGAGTTCCGTGCCTGGATTT +
Preference number: 5 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQWVPCP*SSVPGF
Trigger: AAATCCAGGCACGGAACTCAAAGGGCATGGGACCCA...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTTGTTACTGCCGCTCATaGGAGGTTTGTAGTCGGATC +
Preference number: 5 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLCYCRS*EVCSRI
Trigger: GATCCGACTACAAACCTCCAATGAGCGGCAGTAACA...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATACAGTAATGGTGTGCTaGGCAATGCAGGATCATAGG +
Preference number: 5 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHTVMVC*AMQDHR
Trigger: CCTATGATCCTGCATTGCCAAGCACACCATTACTGT...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTCTTCAGGATCAGTTTAAGTGCACTGGTTTTCCAGAATCCCGCCTGGCACCCCACTCTGTACAATTCCTaGTTTTCAAGGGTAAGTTCC +
Preference number: 5 (lower is better)
Translates to: LFRISLSALVFQNPAWHPTLYNS*FSRVSS
Trigger: GGAACTTACCCTTGAAAACAAGGAATTGTACAGAGT...GGGGTGCCAGGCGGGATTCTGGAAAACCAGTGCACTTAAACTGATCCTGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGCCTGGACACAAAATTTaGGCCCATGGTGCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQPGHKI*AHGAQS
Trigger: GGACTGGGCACCATGGGCCAAAATTTTGTGTCCAGG...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGAGGACTTCCTTGGTTTaGGATGGCGTTTTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGERTSLV*DGVFVF
Trigger: AAAAACAAAAACGCCATCCAAAACCAAGGAAGTCCT...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS TCA 90 bp GATCCAGATTTTCAATGGTGTAATAGCGCTGTTTATAGTCCACTTTaGTGGTCTGGGCATGAGGGCTGCCAATGCCATAACCAATGGCGT +
Preference number: 5 (lower is better)
Translates to: DPDFQWCNSAVYSPL*WSGHEGCQCHNQWR
Trigger: ACGCCATTGGTTATGGCATTGGCAGCCCTCATGCCCAGACCATCAAAGTGGACTATAAACAGCGCTATTACACCATTGAAAATCTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS TCA 90 bp CTTCAGACATGGGTCCCATGCCCTTTGAGTTCCGTGCCTGGATTTTaGAGTAGTATGGTGTGTCAAGAGTTAACTCTTGTATCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: LQTWVPCPLSSVPGF*SSMVCQELTLVSGE
Trigger: CTCACCAGATACAAGAGTTAACTCTTGACACACCATACTACTTCAAAATCCAGGCACGGAACTCAAAGGGCATGGGACCCATGTCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS GCA 90 bp CACAGCACTCTCATACAGGGGGATGCCTTCACCCACGTTATTAAATaGTTTCAGGGTAATCACATAGTGAGAGCTGGGATCCAGATTTTC +
Preference number: 5 (lower is better)
Translates to: HSTLIQGDAFTHVIK*FQGNHIVRAGIQIF
Trigger: GAAAATCTGGATCCCAGCTCTCACTATGTGATTACCCTGAAAGCATTTAATAACGTGGGTGAAGGCATCCCCCTGTATGAGAGTGCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS CCA 90 bp AGAGTTGCGAGGAATTGGAGTATCAGTCATGATGGGGTTTGGGTCTaGAGACTTATCAATGGGTTTCAGCTCCAGTCTCTCATGATGGAT +
Preference number: 5 (lower is better)
Translates to: RVARNWSISHDGVWV*RLINGFQLQSLMMD
Trigger: ATCCATCATGAGAGACTGGAGCTGAAACCCATTGATAAGTCTCCAGACCCAAACCCCATCATGACTGATACTCCAATTCCTCGCAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS CCA 90 bp ATCTTGAGAGTTGCGAGGAATTGGAGTATCAGTCATGATGGGGTTTaGGTCTGGAGACTTATCAATGGGTTTCAGCTCCAGTCTCTCATG +
Preference number: 5 (lower is better)
Translates to: ILRVARNWSISHDGV*VWRLINGFQLQSLM
Trigger: CATGAGAGACTGGAGCTGAAACCCATTGATAAGTCTCCAGACCCAAACCCCATCATGACTGATACTCCAATTCCTCGCAACTCTCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS-3UTR CAA 90 bp CGATTTACTGTCTACACTGCCTTCCACGCTGTCTTCTGGGGATCTGTTGGGGAGTTGGAATGCACCACATaGCTGATAAATAAAGATCCA +
Preference number: 5 (lower is better)
Translates to: RFTVYTAFHAVFWGSVGELECTT*LINKDP
Trigger: TGGATCTTTATTTATCAGCAATGTGGTGCATTCCAA...CTCCCCAACAGATCCCCAGAAGACAGCGTGGAAGGCAGTGTAGACAGTAAATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTACTTCATCACTATACTTaGGTGGCCCACCACTTTCCA +
Preference number: 5 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELLHHYT*VAHHFP
Trigger: TGGAAAGTGGTGGGCCACCAAAGTATAGTGATGAAG...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp CATCTGGCTCCTCAGCATGGACATTCTTACCAGGCTATGACCAAGACATCAGGGCACCAGACCCAAAACTaGAAGATTATGTTCCTTTAC +
Preference number: 5 (lower is better)
Translates to: HLAPQHGHSYQAMTKTSGHQTQN*KIMFLY
Trigger: GTAAAGGAACATAATCTTCAAGTTTTGGGTCTGGTG...CCCTGATGTCTTGGTCATAGCCTGGTAAGAATGTCCATGCTGAGGAGCCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGCAGTTGGGCTCCAGCTaGTGCATTTCCAACATCATT +
Preference number: 5 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLQLGSS*CISNII
Trigger: AATGATGTTGGAAATGCACAAGCTGGAGCCCAACTG...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGAAGGCAGTGGTCCCGTaGTGGCTGGTGCATGTTCAA +
Preference number: 5 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMKAVVP*WLVHVQ
Trigger: TTGAACATGCACCAGCCACAACGGGACCACTGCCTT...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGAGTAATCTGCCCATTTaGTGTGGCTGGAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQSNLPI*CGWSRW
Trigger: CCACCTGCTCCAGCCACACAAAATGGGCAGATTACT...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTGAGCCATTCACTGATTaGCAGGCAGCTCGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLEPFTD*QAARFF
Trigger: AAAGAAACGAGCTGCCTGCAAATCAGTGAATGGCTC...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCCAAATCAAACTCCAGTaGCAACGTAGTGACAATAAG +
Preference number: 5 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFQIKLQ*QRSDNK
Trigger: CTTATTGTCACTACGTTGCAACTGGAGTTTGATTTG...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGAGAAGCAGTCAGGGTTaGTGGGAGGAAATGCCCCAA +
Preference number: 5 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQRSSQG*WEEMPQ
Trigger: TTGGGGCATTTCCTCCCACAAACCCTGACTGCTTCT...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS TCA 90 bp GTTGGAGTAGGAAGTCCTGAAGCAACACATGGCAACACTACATCCTaGCCAATGACTCTGACTAAGGGAGAAGGCTGTTTCAAAAATACC +
Preference number: 5 (lower is better)
Translates to: VGVGSPEATHGNTTS*PMTLTKGEGCFKNT
Trigger: GGTATTTTTGAAACAGCCTTCTCCCTTAGTCAGAGTCATTGGTCAGGATGTAGTGTTGCCATGTGTTGCTTCAGGACTTCCTACTCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558485.1
ENST00000558964.5
ENST00000560262.5
CDS TCA 90 bp TTTGGGTCTGGAGACTTATCAATGGGTTTCAGCTCCAGTCTCTCATaGTGGATCCAGAGATCTGGAGGTTTCACATCTTTGGAATTCCCT +
Preference number: 5 (lower is better)
Translates to: FGSGDLSMGFSSSLS*WIQRSGGFTSLEFP
Trigger: AGGGAATTCCAAAGATGTGAAACCTCCAGATCTCTGGATCCATCATGAGAGACTGGAGCTGAAACCCATTGATAAGTCTCCAGACCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS CCA 90 bp CCCGCCATCTCCTTCAGTTGCATTGCTGATAACCAGCATTCCACTTaGAAGTTTGATAACTCTATCATCCAGAAGAAGGGGTTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: PAISFSCIADNQHST*KFDNSIIQKKGLSV
Trigger: AACAGACAACCCCTTCTTCTGGATGATAGAGTTATCAAACTTCCAAGTGGAATGCTGGTTATCAGCAATGCAACTGAAGGAGATGGCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558485.1
ENST00000558964.5
ENST00000560262.5
CDS-3UTR CAA 90 bp CTGCTGAGCGGCAGCTCAACCAGGACACTACAGGACACACAATGGTTTAGTTTCCTTCACAATTCAGAATaGCATTGTTCCCAGCATAAA +
Preference number: 5 (lower is better)
Translates to: LLSGSSTRTLQDTQWFSFLHNSE*HCSQHK
Trigger: TTTATGCTGGGAACAATGCAATTCTGAATTGTGAAG...GAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGTTGAGCTGCCGCTCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTAACTTCACAGTTGGAGTaGGTTTTCCAGTCACTTCAC +
Preference number: 5 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELTSQLE*VFQSLH
Trigger: GTGAAGTGACTGGAAAACCAACTCCAACTGTGAAGT...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTAGTTTTGAATGGTTACTaGCATCTCTCCTGGGTGACT +
Preference number: 5 (lower is better)
Translates to: LVVSAADLFLAIELKPDLVLNGY*HLSWVT
Trigger: AGTCACCCAGGAGAGATGCAAGTAACCATTCAAAAC...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGTAATCTTCTGGTGCTaGGGCAGCGAGTTGTCTGCC +
Preference number: 5 (lower is better)
Translates to: FLGKRTQELCAKAMASMCVIFWC*GSELSA
Trigger: GGCAGACAACTCGCTGCCCAAGCACCAGAAGATTAC...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTCTTGATCTTCGACCTTaGGTCACCATCACAGAGAAT +
Preference number: 5 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLLDLRP*VTITEN
Trigger: ATTCTCTGTGATGGTGACCAAAGGTCGAAGATCAAG...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CATTCTTACCAGGCTATGACCAAGACATCAGGGCCGCTAAATCCTCAAACCCATTCATACTCCATGTACTaGATCTTCGACCTTTGGTCA +
Preference number: 5 (lower is better)
Translates to: HSYQAMTKTSGPLNPQTHSYSMY*IFDLWS
Trigger: TGACCAAAGGTCGAAGATCAAGTACATGGAGTATGA...ATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTGGTCATAGCCTGGTAAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTTTTAGGTGTTCTGAATaGGACAGCTTCAGACATGGG +
Preference number: 5 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLFRCSE*DSFRHG
Trigger: CCCATGTCTGAAGCTGTCCAATTCAGAACACCTAAA...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCAACGGATTCTGTGGAATaGGCCCTGTCTGAAAGGGAC +
Preference number: 5 (lower is better)
Translates to: QTSSFLNLQLPQREPIIATDSVE*ALSERD
Trigger: GTCCCTTTCAGACAGGGCCAATTCCACAGAATCCGT...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTCCTGGACACAAAATTTaGGCCCATGGTGCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: FLGKRTQELCAKAMASMCPGHKI*AHGAQS
Trigger: GGACTGGGCACCATGGGCCAAAATTTTGTGTCCAGG...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTAAAGTGAAATGCAGGTaGCACTTCTCGCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFKVKCR*HFSPLP
Trigger: GGGAAGAGGCGAGAAGTGCAACCTGCATTTCACTTT...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTTCAAATGTCAACCACTaGTGGAGAACACCAAGGACT +
Preference number: 5 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLSNVNH*WRTPRT
Trigger: AGTCCTTGGTGTTCTCCACAAGTGGTTGACATTTGA...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS TCA 90 bp TGCCTCCTCATTTTTCATCCATTTAATGGTTGGAGTAGGAAGTCCTaGAGCAACACATGGCAACACTACATCCTGACCAATGACTCTGAC +
Preference number: 5 (lower is better)
Translates to: CLLIFHPFNGWSRKS*SNTWQHYILTNDSD
Trigger: GTCAGAGTCATTGGTCAGGATGTAGTGTTGCCATGTGTTGCTTCAGGACTTCCTACTCCAACCATTAAATGGATGAAAAATGAGGAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558485.1
ENST00000558964.5
ENST00000560262.5
CDS CCA 90 bp CATGGAGTTGTCAACTGGTGTGATATCTTGAGAGTTGCGAGGAATTaGAGTATCAGTCATGATGGGGTTTGGGTCTGGAGACTTATCAAT +
Preference number: 5 (lower is better)
Translates to: HGVVNWCDILRVARN*SISHDGVWVWRLIN
Trigger: ATTGATAAGTCTCCAGACCCAAACCCCATCATGACTGATACTCCAATTCCTCGCAACTCTCAAGATATCACACCAGTTGACAACTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS-3UTR CAA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTATCAGGTTTATTGTGTTaGGAATGCACCACATTGCTG +
Preference number: 5 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELSGLLC*ECTTLL
Trigger: CAGCAATGTGGTGCATTCCAAACACAATAAACCTGA...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCAATCCAGAAGAAGGGGTaGTCTGTTCTGTTCCCACCT +
Preference number: 5 (lower is better)
Translates to: QTSSFLNLQLPQREPIIAIQKKG*SVLFPP
Trigger: AGGTGGGAACAGAACAGACAACCCCTTCTTCTGGAT...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTGAATTCAGGTTGAGCTaGCACTGTAAGCTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFEFRLS*HCKLCL
Trigger: CAAGCAGAGCTTACAGTGCAAGCTCAACCTGAATTC...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAAAGTAATCTGCCCATTTaGTGTGGCTGGAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFESNLPI*CGWSRW
Trigger: CCACCTGCTCCAGCCACACAAAATGGGCAGATTACT...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AATGTCAACCACTTGTGGAGAACACCAAGGACTTCCTTGGTTTTGGATGGCGTTTTTGCATTCTTGTACTaGGTGTTTGCTGGGATGTTG +
Preference number: 5 (lower is better)
Translates to: NVNHLWRTPRTSLVLDGVFAFLY*VFAGML
Trigger: CAACATCCCAGCAAACACCAAGTACAAGAATGCAAA...AACGCCATCCAAAACCAAGGAAGTCCTTGGTGTTCTCCACAAGTGGTTGACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTTTTGCATTCTTGTACTaGGTGTTTGCTGGGATGTTG +
Preference number: 5 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLFAFLY*VFAGML
Trigger: CAACATCCCAGCAAACACCAAGTACAAGAATGCAAA...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTATCATACTCCATGTACTaGATCTTCGACCTTTGGTCA +
Preference number: 5 (lower is better)
Translates to: LVVSAADLFLAIELKPDLSYSMY*IFDLWS
Trigger: TGACCAAAGGTCGAAGATCAAGTACATGGAGTATGA...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCATGTTACTGCCGCTCATaGGAGGTTTGTAGTCGGATC +
Preference number: 5 (lower is better)
Translates to: QTSSFLNLQLPQREPIIACYCRS*EVCSRI
Trigger: GATCCGACTACAAACCTCCAATGAGCGGCAGTAACA...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTAGGGCATCATCATTTTaGGTCTCATTCCTCGCCTTC +
Preference number: 5 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFRASSF*VSFLAF
Trigger: GAAGGCGAGGAATGAGACCAAAAATGATGATGCCCT...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAAAGGTGGGCCATCTCTTaGGTCAGCTCATCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFERWAIS*VSSSGS
Trigger: TGAACCAGATGAGCTGACCAAAGAGATGGCCCACCT...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS TCA 90 bp CAGAGATCTGGAGGTTTCACATCTTTGGAATTCCCTTTGTACTTATaGGAGCCATTCACTGATTTGCAGGCAGCTCGTTTCTTTTTCTGG +
Preference number: 5 (lower is better)
Translates to: QRSGGFTSLEFPLYL*EPFTDLQAARFFFW
Trigger: CCAGAAAAAGAAACGAGCTGCCTGCAAATCAGTGAATGGCTCTCATAAGTACAAAGGGAATTCCAAAGATGTGAAACCTCCAGATCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS-3UTR CAA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGTCTCCTTCAGTTGCATaGCTGATAACCAGCATTCCA +
Preference number: 5 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQSPSVA*LITSIP
Trigger: TGGAATGCTGGTTATCAGCAATGCAACTGAAGGAGA...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCACTTCATCACTATACTTaGGTGGCCCACCACTTTCCA +
Preference number: 5 (lower is better)
Translates to: QTSSFLNLQLPQREPIIALHHYT*VAHHFP
Trigger: TGGAAAGTGGTGGGCCACCAAAGTATAGTGATGAAG...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCAGAATTCAGGTTGAGCTaGCACTGTAAGCTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: QTSSFLNLQLPQREPIIAEFRLS*HCKLCL
Trigger: CAAGCAGAGCTTACAGTGCAAGCTCAACCTGAATTC...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAACCATATCCCCATTTTaGACCCACTTCACAGTTGGA +
Preference number: 5 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQTISPF*THFTVG
Trigger: TCCAACTGTGAAGTGGGTCAAAAATGGGGATATGGT...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTCACCAGACCCAAAACTaGAAGATTATGTTCCTTTAC +
Preference number: 5 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLHQTQN*KIMFLY
Trigger: GTAAAGGAACATAATCTTCAAGTTTTGGGTCTGGTG...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTGTTTTGAATGGTTACTaGCATCTCTCCTGGGTGACT +
Preference number: 5 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFVLNGY*HLSWVT
Trigger: AGTCACCCAGGAGAGATGCAAGTAACCATTCAAAAC...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTATCAAAGTGGTTGCATTaGCATTCTTGTACTTGGTGT +
Preference number: 5 (lower is better)
Translates to: LVVSAADLFLAIELKPDLSKWLH*HSCTWC
Trigger: ACACCAAGTACAAGAATGCAAATGCAACCACTTTGA...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp AGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGCTGTCAAAGTGGTTGCATTaGCATTCTTGTACTTGGTGT +
Preference number: 5 (lower is better)
Translates to: RKKNPRTMCKGNGFHVWLSKWLH*HSCTWC
Trigger: ACACCAAGTACAAGAATGCAAATGCAACCACTTTGA...CAGCCACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTCTCGTACTCTGTACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGTTTAGGTGTTCTGAATaGGACAGCTTCAGACATGGG +
Preference number: 5 (lower is better)
Translates to: LSYSVQFLVFKGKFQDFQFRCSE*DSFRHG
Trigger: CCCATGTCTGAAGCTGTCCAATTCAGAACACCTAAA...CTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTACAGAGTACGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTAGGAGGTTTCACATCTTaGGAATTCCCTTTGTACTTA +
Preference number: 5 (lower is better)
Translates to: LVVSAADLFLAIELKPDLGGFTS*EFPLYL
Trigger: TAAGTACAAAGGGAATTCCAAAGATGTGAAACCTCC...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTAGGAGGTTTCACATCTTaGGAATTCCCTTTGTACTTA +
Preference number: 5 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELGGFTS*EFPLYL
Trigger: TAAGTACAAAGGGAATTCCAAAGATGTGAAACCTCC...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGAGGGCATCATCATTTTaGGTCTCATTCCTCGCCTTC +
Preference number: 5 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMRASSF*VSFLAF
Trigger: GAAGGCGAGGAATGAGACCAAAAATGATGATGCCCT...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGGTGGTTTCAGCAGCTGATCTCTTCTTGGCTATAGAACTGAAGCCCGATTTACAAATCAAACTCCAGTaGCAACGTAGTGACAATAAG +
Preference number: 5 (lower is better)
Translates to: LVVSAADLFLAIELKPDLQIKLQ*QRSDNK
Trigger: CTTATTGTCACTACGTTGCAACTGGAGTTTGATTTG...TAAATCGGGCTTCAGTTCTATAGCCAAGAAGAGATCAGCTGCTGAAACCACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CTGGCTCATTCTGTGTTCTCAAGTGCTGTCCTCTCGTACTCTGTACAATTCCTTAAAGGGTCTCCATCCTaGCTTTCTGATTTACAGAAT +
Preference number: 5 (lower is better)
Translates to: LAHSVFSSAVLSYSVQFLKGSPS*LSDLQN
Trigger: ATTCTGTAAATCAGAAAGCAAGGATGGAGACCCTTT...AAGGAATTGTACAGAGTACGAGAGGACAGCACTTGAGAACACAGAATGAGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CCCCCTCAGAGTGATGGATTAACAGCTGGTAGAGGATGCAATGACTCAGAATTAAAAGGGTCTCCATCCTaGCTTTCTGATTTACAGAAT +
Preference number: 5 (lower is better)
Translates to: PPQSDGLTAGRGCNDSELKGSPS*LSDLQN
Trigger: ATTCTGTAAATCAGAAAGCAAGGATGGAGACCCTTT...TAATTCTGAGTCATTGCATCCTCTACCAGCTGTTAATCCATCACTCTGAGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCAACTTCACAGTTGGAGTaGGTTTTCCAGTCACTTCAC +
Preference number: 5 (lower is better)
Translates to: QTSSFLNLQLPQREPIIATSQLE*VFQSLH
Trigger: GTGAAGTGACTGGAAAACCAACTCCAACTGTGAAGT...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCAACCATATCCCCATTTTaGACCCACTTCACAGTTGGA +
Preference number: 5 (lower is better)
Translates to: QTSSFLNLQLPQREPIIATISPF*THFTVG
Trigger: TCCAACTGTGAAGTGGGTCAAAAATGGGGATATGGT...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CAAGACATCAGGGCCGCTAAATCCTCAAACCCATCTATTGCACAGAAGAATTTTTCATACTCCATGTACTaGATCTTCGACCTTTGGTCA +
Preference number: 5 (lower is better)
Translates to: QDIRAAKSSNPSIAQKNFSYSMY*IFDLWS
Trigger: TGACCAAAGGTCGAAGATCAAGTACATGGAGTATGA...AAAATTCTTCTGTGCAATAGATGGGTTTGAGGATTTAGCGGCCCTGATGTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCATTTAGGTGTTCTGAATaGGACAGCTTCAGACATGGG +
Preference number: 5 (lower is better)
Translates to: QTSSFLNLQLPQREPIIAFRCSE*DSFRHG
Trigger: CCCATGTCTGAAGCTGTCCAATTCAGAACACCTAAA...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTACAGTAATGGTGTGCTaGGCAATGCAGGATCATAGG +
Preference number: 5 (lower is better)
Translates to: FLGKRTQELCAKAMASMCTVMVC*AMQDHR
Trigger: CCTATGATCCTGCATTGCCAAGCACACCATTACTGT...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS CCA 90 bp ATCATCCAGAAGAAGGGGTTGTCTGTTCTGTTCCCACCTCACAAATaGGACCAAATCTGCATTAACTTCACAATTCAGAATTGCATTGTT +
Preference number: 5 (lower is better)
Translates to: IIQKKGLSVLFPPHK*DQICINFTIQNCIV
Trigger: AACAATGCAATTCTGAATTGTGAAGTTAATGCAGATTTGGTCCCATTTGTGAGGTGGGAACAGAACAGACAACCCCTTCTTCTGGATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
CDS-3UTR CAA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAATCTCCTTCAGTTGCATaGCTGATAACCAGCATTCCA +
Preference number: 5 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFESPSVA*LITSIP
Trigger: TGGAATGCTGGTTATCAGCAATGCAACTGAAGGAGA...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAATTCAAGGATTATCAGTaGGGCTCCAGCTTGTGCATT +
Preference number: 5 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFEFKDYQ*GSSLCI
Trigger: AATGCACAAGCTGGAGCCCAACTGATAATCCTTGAA...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTAACTGGTGTGATATCTaGAGAGTTGCGAGGAATTGG +
Preference number: 5 (lower is better)
Translates to: FLGKRTQELCAKAMASMCNWCDI*RVARNW
Trigger: CCAATTCCTCGCAACTCTCAAGATATCACACCAGTT...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAATTGCTGTCCATGGAGTaGTCAACTGGTGTGATATCT +
Preference number: 5 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFELLSME*STGVIS
Trigger: AGATATCACACCAGTTGACAACTCCATGGACAGCAA...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTAAGTGGGAGGTAATGTaGGGATGGCAACATCATGTT +
Preference number: 5 (lower is better)
Translates to: FLGKRTQELCAKAMASMCKWEVM*GWQHHV
Trigger: AACATGATGTTGCCATCCCAACATTACCTCCCACTT...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS-3UTR CAA 90 bp AGGAGTCGTATACGGAAACAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAATTCCACTTGGAAGTTaGATAACTCTATCATCCAGA +
Preference number: 5 (lower is better)
Translates to: RSRIRKQTSSFLNLQLPQIPLGS*ITLSSR
Trigger: TCTGGATGATAGAGTTATCAAACTTCCAAGTGGAAT...TTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTGTTTCCGTATACGACTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCACTGCTTGAGCTTCAATaGTCTCATTTCCATTATCAG +
Preference number: 5 (lower is better)
Translates to: QTSSFLNLQLPQREPIIALLELQ*SHFHYQ
Trigger: CTGATAATGGAAATGAGACAATTGAAGCTCAAGCAG...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS-3UTR CAA 90 bp ACCAGGACACTACAGGACACACAATGGTTTAGTTTCGAAAATCACAGGAAAATGTGGTGTAAGAGTGACTaGAAACATCAACATCCTGTT +
Preference number: 5 (lower is better)
Translates to: TRTLQDTQWFSFENHRKMWCKSD*KHQHPV
Trigger: AACAGGATGTTGATGTTTCAAGTCACTCTTACACCA...CATTTTCCTGTGATTTTCGAAACTAAACCATTGTGTGTCCTGTAGTGTCCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp CAAACAAGTTCCTTCCTTAACCTCCAACTTCCTCAAAGAGAGCCAATAATAGCATCAAAGTGGTTGCATTaGCATTCTTGTACTTGGTGT +
Preference number: 5 (lower is better)
Translates to: QTSSFLNLQLPQREPIIASKWLH*HSCTWC
Trigger: ACACCAAGTACAAGAATGCAAATGCAACCACTTTGA...TGCTATTATTGGCTCTCTTTGAGGAAGTTGGAGGTTAAGGAAGGAACTTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAATGGTGTAAGAGTGACTaGAAACATCAACATCCTGTT +
Preference number: 5 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFEWCKSD*KHQHPV
Trigger: AACAGGATGTTGATGTTTCAAGTCACTCTTACACCA...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTGGAGGTTTCACATCTTaGGAATTCCCTTTGTACTTA +
Preference number: 5 (lower is better)
Translates to: FLGKRTQELCAKAMASMCGGFTS*EFPLYL
Trigger: TAAGTACAAAGGGAATTCCAAAGATGTGAAACCTCC...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp TTTTTAGGAAAAAGAACCCAAGAACTATGTGCAAAGGCAATGGCTTCCATGTGTACTCTGTACAATTCCTaGTTTTCAAGGGTAAGTTCC +
Preference number: 5 (lower is better)
Translates to: FLGKRTQELCAKAMASMCTLYNS*FSRVSS
Trigger: GGAACTTACCCTTGAAAACAAGGAATTGTACAGAGT...ACACATGGAAGCCATTGCCTTTGCACATAGTTCTTGGGTTCTTTTTCCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
CDS-3UTR CAA 90 bp TACAATTCCTTGTTTTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTGAACTTCACAATTCAGAATaGCATTGTTCCCAGCATAAA +
Preference number: 5 (lower is better)
Translates to: YNSLFSRVSSKTSRLRFELHNSE*HCSQHK
Trigger: TTTATGCTGGGAACAATGCAATTCTGAATTGTGAAG...TTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAAAACAAGGAATTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS GCA 72 bp CTCCTTCCCTCCCGCGCGCCTCAGCCGGTCCCTCGCTaGAAGCTCGGCTCCCGCGGCCGCCGCTGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: LLPSRAPQPVPR*KLGSRGRRCSS
Trigger: GCTGGAGCAGCGGCGGCCGCGGGAGCCGAGCTTGCAGCGAGGGACCGGCTGAGGCGCGCGGGAGGGAAGGAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261908.11
ENST00000339362.9
CDS CCA 72 bp TCCCTCCTGAGGGCGAGAGGCGCTCCGAGCTCAGGCTaGTCCGGGAGGCCGGCGTGGGCGCGCACCTCTGCA +
Preference number: 6 (lower is better)
Translates to: SLLRARGAPSSG*SGRPAWARTSA
Trigger: TGCAGAGGTGCGCGCCCACGCCGGCCTCCCGGACCAGCCTGAGCTCGGAGCGCCTCTCGCCCTCAGGAGGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS GCA 72 bp TGCTCGCCAAAAACAATAGCGATCCCGCCCGACTCTTaGTGGGCCCTGGCGCGGCTCCCGTGGGAGGGGGCC +
Preference number: 6 (lower is better)
Translates to: CSPKTIAIPPDS*WALARLPWEGA
Trigger: GGCCCCCTCCCACGGGAGCCGCGCCAGGGCCCAGCAAGAGTCGGGCGGGATCGCTATTGTTTTTGGCGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS CAA 72 bp GTGCTCGCCAAAAACAATAGCGATCCCGCCCGACTCTaGCTGGGCCCTGGCGCGGCTCCCGTGGGAGGGGGC +
Preference number: 6 (lower is better)
Translates to: VLAKNNSDPARL*LGPGAAPVGGG
Trigger: GCCCCCTCCCACGGGAGCCGCGCCAGGGCCCAGCAAGAGTCGGGCGGGATCGCTATTGTTTTTGGCGAGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS CAA 90 bp CCAGGGAGGCCACGACATCCCGAGGAGCTGAAGGCAGTGGTCCCGTaGTGGCTGGTGCTGGCTCAGAGGGTCCCACGCCCACAGAGTCTC +
Preference number: 6 (lower is better)
Translates to: PGRPRHPEELKAVVP*WLVLAQRVPRPQSL
Trigger: GAGACTCTGTGGGCGTGGGACCCTCTGAGCCAGCACCAGCCACAACGGGACCACTGCCTTCAGCTCCTCGGGATGTCGTGGCCTCCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560352.5
CDS CCA 72 bp CGACATCCCGAGGAGCTGAAGGCAGTGGTCCCGTTGTaGCTGGTGCTGGCTCAGAGGGTCCCACGCCCACAG +
Preference number: 6 (lower is better)
Translates to: RHPEELKAVVPL*LVLAQRVPRPQ
Trigger: CTGTGGGCGTGGGACCCTCTGAGCCAGCACCAGCCACAACGGGACCACTGCCTTCAGCTCCTCGGGATGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560352.5
CDS TCA 72 bp GGTAGAGACCAGGGAGGCCACGACATCCCGAGGAGCTaGAGGCAGTGGTCCCGTTGTGGCTGGTGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: GRDQGGHDIPRS*RQWSRCGWCWL
Trigger: GAGCCAGCACCAGCCACAACGGGACCACTGCCTTCAGCTCCTCGGGATGTCGTGGCCTCCCTGGTCTCTACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560352.5
CDS CCA 72 bp GCCGGCGTGGGCGCGCACCTCTGCACAGTCCGGGCCTaGAGCCTCTATATAGGGCCTCAGAGGAAACCGAAA +
Preference number: 6 (lower is better)
Translates to: AGVGAHLCTVRA*SLYIGPQRKPK
Trigger: TTTCGGTTTCCTCTGAGGCCCTATATAGAGGCTCCAGGCCCGGACTGTGCAGAGGTGCGCGCCCACGCCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS TCA 72 bp GGTAGAGACCAGGGAGGCCACGACATCCCGAGGAGCTaGAGGCAGTGGTCCCGTTGTGGCTGGTGCAACAGG +
Preference number: 6 (lower is better)
Translates to: GRDQGGHDIPRS*RQWSRCGWCNR
Trigger: CCTGTTGCACCAGCCACAACGGGACCACTGCCTTCAGCTCCTCGGGATGTCGTGGCCTCCCTGGTCTCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560407.1
CDS GCA 72 bp AGAGGAAACCGAAAGGCCTCCGGGAGGAAACCTGGGTaGGCAGTGGGTCGGCCCGGGGATTTATGTGCTCGC +
Preference number: 6 (lower is better)
Translates to: RGNRKASGRKPG*AVGRPGDLCAR
Trigger: GCGAGCACATAAATCCCCGGGCCGACCCACTGCGCACCCAGGTTTCCTCCCGGAGGCCTTTCGGTTTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS CCA 72 bp CCTCAGAGGAAACCGAAAGGCCTCCGGGAGGAAACCTaGGTGCGCAGTGGGTCGGCCCGGGGATTTATGTGC +
Preference number: 6 (lower is better)
Translates to: PQRKPKGLREET*VRSGSARGFMC
Trigger: GCACATAAATCCCCGGGCCGACCCACTGCGCACCCAGGTTTCCTCCCGGAGGCCTTTCGGTTTCCTCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS TCA 72 bp GGTAGAGACCAGGGAGGCCACGACATCCCGAGGAGCTaGAGGCAGTGGTCCCGTTGTGGCTGGTGCATGTTC +
Preference number: 6 (lower is better)
Translates to: GRDQGGHDIPRS*RQWSRCGWCMF
Trigger: GAACATGCACCAGCCACAACGGGACCACTGCCTTCAGCTCCTCGGGATGTCGTGGCCTCCCTGGTCTCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
CDS CCA 72 bp AGGATCATAGGTGGGAGGTCCTGGAGGCGGGATTGCTaGCACGGCGAAGCTCTTCAATGGGTGGGAAGGGCG +
Preference number: 6 (lower is better)
Translates to: RIIGGRSWRRDC*HGEALQWVGRA
Trigger: CGCCCTTCCCACCCATTGAAGAGCTTCGCCGTGCCAGCAATCCCGCCTCCAGGACCTCCCACCTATGATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558886.1
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
ENST00000560808.1
CDS CCA 72 bp ACCGAAAGGCCTCCGGGAGGAAACCTGGGTGCGCAGTaGGTCGGCCCGGGGATTTATGTGCTCGCCAAAAAC +
Preference number: 6 (lower is better)
Translates to: TERPPGGNLGAQ*VGPGIYVLAKN
Trigger: GTTTTTGGCGAGCACATAAATCCCCGGGCCGACCCACTGCGCACCCAGGTTTCCTCCCGGAGGCCTTTCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS TCA 72 bp GGCCCTGGGGCATGTTCCCAGGCAATCTGGCTGGACTaGTGGCCCCACGAACTTACACTCTCGGAGTCTTCC +
Preference number: 6 (lower is better)
Translates to: GPGACSQAIWLD*WPHELTLSESS
Trigger: GGAAGACTCCGAGAGTGTAAGTTCGTGGGGCCATCAGTCCAGCCAGATTGCCTGGGAACATGCCCCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558886.1
CDS GCA 72 bp TGCAGGATCATAGGTGGGAGGTCCTGGAGGCGGGATTaGTGGCACGGCGAAGCTCTTCAATGGGTGGGAAGG +
Preference number: 6 (lower is better)
Translates to: CRIIGGRSWRRD*WHGEALQWVGR
Trigger: CCTTCCCACCCATTGAAGAGCTTCGCCGTGCCAGCAATCCCGCCTCCAGGACCTCCCACCTATGATCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558886.1
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
ENST00000560808.1
CDS GCA 72 bp ACCTGGGTGCGCAGTGGGTCGGCCCGGGGATTTATGTaGTCGCCAAAAACAATAGCGATCCCGCCCGACTCT +
Preference number: 6 (lower is better)
Translates to: TWVRSGSARGFM*SPKTIAIPPDS
Trigger: AGAGTCGGGCGGGATCGCTATTGTTTTTGGCGAGCACATAAATCCCCGGGCCGACCCACTGCGCACCCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339362.9
CDS GCA 72 bp TTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTaGCAGACAGTGGGCGCAGGTCAGTGGGTGCAGCGC +
Preference number: 6 (lower is better)
Translates to: FHLRYRVHLTRE*QTVGAGQWVQR
Trigger: GCGCTGCACCCACTGACCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560407.1
CDS CCA 72 bp CCATGGGCTGCCCGGGTGGTAGAGATGACTGCGAGCTaGAGAAGCGAGGCTGCTGGAGTGGAAATGATGGTG +
Preference number: 6 (lower is better)
Translates to: PWAARVVEMTAS*RSEAAGVEMMV
Trigger: CACCATCATTTCCACTCCAGCAGCCTCGCTTCTCCAGCTCGCAGTCATCTCTACCACCCGGGCAGCCCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS GCA 72 bp CTGAAAGGGACATGGATGTGCCAATGGGCCATGGGCTaGCCGGGTGGTAGAGATGACTGCGAGCTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: LKGTWMCQWAMG*PGGRDDCELEK
Trigger: CTTCTCCAGCTCGCAGTCATCTCTACCACCCGGGCAGCCCATGGCCCATTGGCACATCCATGTCCCTTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS CCA 72 bp CGGATTCTGTGGAATTGGCCCTGTCTGAAAGGGACATaGATGTGCCAATGGGCCATGGGCTGCCCGGGTGGT +
Preference number: 6 (lower is better)
Translates to: RILWNWPCLKGT*MCQWAMGCPGG
Trigger: ACCACCCGGGCAGCCCATGGCCCATTGGCACATCCATGTCCCTTTCAGACAGGGCCAATTCCACAGAATCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS CCA 72 bp TGGAAGCCTGAACTCCCACTGGTGGCATCATGGGAGTaGGATCTGGCACTGTGTGAGGCCTGGTCACAGCAC +
Preference number: 6 (lower is better)
Translates to: WKPELPLVASWE*DLALCEAWSQH
Trigger: GTGCTGTGACCAGGCCTCACACAGTGCCAGATCCCACTCCCATGATGCCACCAGTGGGAGTTCAGGCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS CCA 72 bp TCTCAGGCCCTGGGGCATGTTCCCAGGCAATCTGGCTaGACTGATGGCCCCACGAACTTACACTCTCGGAGT +
Preference number: 6 (lower is better)
Translates to: SQALGHVPRQSG*TDGPTNLHSRS
Trigger: ACTCCGAGAGTGTAAGTTCGTGGGGCCATCAGTCCAGCCAGATTGCCTGGGAACATGCCCCAGGGCCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558886.1
CDS CCA 72 bp AATTGGCCCTGTCTGAAAGGGACATGGATGTGCCAATaGGCCATGGGCTGCCCGGGTGGTAGAGATGACTGC +
Preference number: 6 (lower is better)
Translates to: NWPCLKGTWMCQ*AMGCPGGRDDC
Trigger: GCAGTCATCTCTACCACCCGGGCAGCCCATGGCCCATTGGCACATCCATGTCCCTTTCAGACAGGGCCAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS CCA 72 bp GCTGAAGGCAGTGGTCCCGTTGTGGCTGGTGCTAGATaGTCAGTAGTGGCACTGGTCAGTGAAGTGGGAGGT +
Preference number: 6 (lower is better)
Translates to: AEGSGPVVAGAR*SVVALVSEVGG
Trigger: ACCTCCCACTTCACTGACCAGTGCCACTACTGACCATCTAGCACCAGCCACAACGGGACCACTGCCTTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS GCA 72 bp GGAGGTAGGCGAAGCTGCATATGCACGAAGGTTAGGTaGTGGGCCAGGGAGCTGAACCTCAGGTTGTGTTTC +
Preference number: 6 (lower is better)
Translates to: GGRRSCICTKVR*WARELNLRLCF
Trigger: GAAACACAACCTGAGGTTCAGCTCCCTGGCCCAGCACCTAACCTTCGTGCATATGCAGCTTCGCCTACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
ENST00000560352.5
CDS GCA 72 bp CCACGTAACAGTGATGGAGGTAGGCGAAGCTGCATATaGACGAAGGTTAGGTGCTGGGCCAGGGAGCTGAAC +
Preference number: 6 (lower is better)
Translates to: PRNSDGGRRSCI*TKVRCWARELN
Trigger: GTTCAGCTCCCTGGCCCAGCACCTAACCTTCGTGCATATGCAGCTTCGCCTACCTCCATCACTGTTACGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
ENST00000560352.5
CDS CCA 72 bp ATGTTTGAGACGAAGAGGCTGGCATGGTGTCAGTGCTaGGGGTATTTCGAACGGATTGCTGGGGTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: MFETKRLAWCQC*GYFERIAGVAG
Trigger: CCCAGCCACCCCAGCAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560262.5
CDS CCA 72 bp GCACAGATTATCAGCTTGACCAGCAGTCTCAGGCCCTaGGGCATGTTCCCAGGCAATCTGGCTGGACTGATG +
Preference number: 6 (lower is better)
Translates to: AQIISLTSSLRP*GMFPGNLAGLM
Trigger: CATCAGTCCAGCCAGATTGCCTGGGAACATGCCCCAGGGCCTGAGACTGCTGGTCAAGCTGATAATCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558886.1
CDS CAA 72 bp CCACGACATCCCGAGGAGCTGAAGGCAGTGGTCCCGTaGTGGCTGGTGCATGTTCAAGGATTATCAGTTGGG +
Preference number: 6 (lower is better)
Translates to: PRHPEELKAVVP*WLVHVQGLSVG
Trigger: CCCAACTGATAATCCTTGAACATGCACCAGCCACAACGGGACCACTGCCTTCAGCTCCTCGGGATGTCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
CDS CAA 90 bp ACTGATGGCCCCACGAACTTACACTCTCGGAGTCTTCCAACATCCTaGTGGTCTCCTGCACTTCAGGGGCACTGGGAACAACCACTGGCA +
Preference number: 6 (lower is better)
Translates to: TDGPTNLHSRSLPTS*WSPALQGHWEQPLA
Trigger: TGCCAGTGGTTGTTCCCAGTGCCCCTGAAGTGCAGGAGACCACAAGGATGTTGGAAGACTCCGAGAGTGTAAGTTCGTGGGGCCATCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558886.1
CDS TCA 72 bp GCTGAGACAGCTGTGTCCCGCTTACCAAGGTCTCAGTaGCATCACTCTTTCGGGAGGCCTTTCGGTAGCGAA +
Preference number: 6 (lower is better)
Translates to: AETAVSRLPRSQ*HHSFGRPFGSE
Trigger: TTCGCTACCGAAAGGCCTCCCGAAAGAGTGATGTCACTGAGACCTTGGTAAGCGGGACACAGCTGTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558807.1
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS GCA 72 bp TGTTTCCCACGTAACAGTGATGGAGGTAGGCGAAGCTaGATATGCACGAAGGTTAGGTGCTGGGCCAGGGAG +
Preference number: 6 (lower is better)
Translates to: CFPRNSDGGRRS*ICTKVRCWARE
Trigger: CTCCCTGGCCCAGCACCTAACCTTCGTGCATATGCAGCTTCGCCTACCTCCATCACTGTTACGTGGGAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
ENST00000560352.5
CDS GCA 72 bp AGCATGTTTGAGACGAAGAGGCTGGCATGGTGTCAGTaGTGGGGGTATTTCGAACGGATTGCTGGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: SMFETKRLAWCQ*WGYFERIAGVA
Trigger: AGCCACCCCAGCAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560262.5
CDS CCA 72 bp GGTGTCATGACTCAGAATGGAAGCCTGAACTCCCACTaGTGGCATCATGGGAGTGGGATCTGGCACTGGAGT +
Preference number: 6 (lower is better)
Translates to: GVMTQNGSLNSH*WHHGSGIWHWS
Trigger: ACTCCAGTGCCAGATCCCACTCCCATGATGCCACCAGTGGGAGTTCAGGCTTCCATTCTGAGTCATGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
CDS CCA 72 bp GTCATGACTCAGAATGGAAGCCTGAACTCCCACTGGTaGCATCATGGGAGTGGGATCTGGCACTGTGTGAGG +
Preference number: 6 (lower is better)
Translates to: VMTQNGSLNSHW*HHGSGIWHCVR
Trigger: CCTCACACAGTGCCAGATCCCACTCCCATGATGCCACCAGTGGGAGTTCAGGCTTCCATTCTGAGTCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS CCA 72 bp GGTGTCATGACTCAGAATGGAAGCCTGAACTCCCACTaGTGGCATCATGGGAGTGGGATCTGGCACTGTGTG +
Preference number: 6 (lower is better)
Translates to: GVMTQNGSLNSH*WHHGSGIWHCV
Trigger: CACACAGTGCCAGATCCCACTCCCATGATGCCACCAGTGGGAGTTCAGGCTTCCATTCTGAGTCATGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS CCA 72 bp CCGGTCTACAGCTTCCAGCGTGAGCGACGCAGAAGATaGGTGATTTCTGCATTTCCATCTGAGGTACCGGGT +
Preference number: 6 (lower is better)
Translates to: PVYSFQRERRRR*VISAFPSEVPG
Trigger: ACCCGGTACCTCAGATGGAAATGCAGAAATCACCCATCTTCTGCGTCGCTCACGCTGGAAGCTGTAGACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560407.1
CDS TCA 72 bp CCGAATAGGAACAGCTCCGGTCTACAGCTTCCAGCGTaGGCGACGCAGAAGATGGGTGATTTCTGCATTTCC +
Preference number: 6 (lower is better)
Translates to: PNRNSSGLQLPA*ATQKMGDFCIS
Trigger: GGAAATGCAGAAATCACCCATCTTCTGCGTCGCTCACGCTGGAAGCTGTAGACCGGAGCTGTTCCTATTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560407.1
CDS GCA 72 bp CTACTCTCGGAGTCTTCCAACATCCTTGTGGTCTCCTaGACTTCAGGGGCACTGGGAACAACCACTGGCATA +
Preference number: 6 (lower is better)
Translates to: LLSESSNILVVS*TSGALGTTTGI
Trigger: TATGCCAGTGGTTGTTCCCAGTGCCCCTGAAGTGCAGGAGACCACAAGGATGTTGGAAGACTCCGAGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
ENST00000560808.1
CDS GCA 72 bp ACACTCTCGGAGTCTTCCAACATCCTTGTGGTCTCCTaGACTTCAGGGGCACTGGGAACAACCACTGGCATA +
Preference number: 6 (lower is better)
Translates to: TLSESSNILVVS*TSGALGTTTGI
Trigger: TATGCCAGTGGTTGTTCCCAGTGCCCCTGAAGTGCAGGAGACCACAAGGATGTTGGAAGACTCCGAGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558886.1
CDS CCA 72 bp GTCATGACTCAGAATGGAAGCCTGAACTCCCACTGGTaGCATCATGGGAGTGGGATCTGGCACTGGAGTGTA +
Preference number: 6 (lower is better)
Translates to: VMTQNGSLNSHW*HHGSGIWHWSV
Trigger: TACACTCCAGTGCCAGATCCCACTCCCATGATGCCACCAGTGGGAGTTCAGGCTTCCATTCTGAGTCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
CDS CCA 72 bp GGTAGAGATGACTGCGAGCTGGAGAAGCGAGGCTGCTaGAGTGGAAATGATGGTGAGGGTTATCGAGGGAAT +
Preference number: 6 (lower is better)
Translates to: GRDDCELEKRGC*SGNDGEGYRGN
Trigger: ATTCCCTCGATAACCCTCACCATCATTTCCACTCCAGCAGCCTCGCTTCTCCAGCTCGCAGTCATCTCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS CAA 72 bp GATGGTTCAGAGCTTGCTGGGACAGTAATGGTGTGCTaGGCAATGCAGGATCATAGGTGGGAGGTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: DGSELAGTVMVC*AMQDHRWEVLE
Trigger: CTCCAGGACCTCCCACCTATGATCCTGCATTGCCAAGCACACCATTACTGTCCCAGCAAGCTCTGAACCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558886.1
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
ENST00000560808.1
CDS CAA 72 bp CCCACGAACTTACACTCTCGGAGTCTTCCAACATCCTaGTGGTCTCCTGCACTTCAGGGGCACTGGGAACAA +
Preference number: 6 (lower is better)
Translates to: PTNLHSRSLPTS*WSPALQGHWEQ
Trigger: TTGTTCCCAGTGCCCCTGAAGTGCAGGAGACCACAAGGATGTTGGAAGACTCCGAGAGTGTAAGTTCGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558886.1
CDS CAA 90 bp AGTGAATGTGATGGTTCAGAGCTTGCTGGGACAGTAATGGTGTGCTaGGCAATGCAGGATCATAGGTGGGAGGTCCTGGAGGCGGGATTG +
Preference number: 6 (lower is better)
Translates to: SECDGSELAGTVMVC*AMQDHRWEVLEAGL
Trigger: CAATCCCGCCTCCAGGACCTCCCACCTATGATCCTGCATTGCCAAGCACACCATTACTGTCCCAGCAAGCTCTGAACCATCACATTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558886.1
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
ENST00000560808.1
CDS CAA 90 bp TCAGCTCATCTGGTTCATAGCTACTCTCGGAGTCTTCCAACATCCTaGTGGTCTCCTGCACTTCAGGGGCACTGGGAACAACCACTGGCA +
Preference number: 6 (lower is better)
Translates to: SAHLVHSYSRSLPTS*WSPALQGHWEQPLA
Trigger: TGCCAGTGGTTGTTCCCAGTGCCCCTGAAGTGCAGGAGACCACAAGGATGTTGGAAGACTCCGAGAGTAGCTATGAACCAGATGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
ENST00000560808.1
CDS TCA 72 bp CAGCTCACTACGATGCTAGTAACGAGCGGGCGTACGTaGAGAGAGCTAGGCACTTCAGGAACACGAGTTTCA +
Preference number: 6 (lower is better)
Translates to: QLTTMLVTSGRT*RELGTSGTRVS
Trigger: TGAAACTCGTGTTCCTGAAGTGCCTAGCTCTCTTCACGTACGCCCGCTCGTTACTAGCATCGTAGTGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS TCA 72 bp GGTATTTCGAACGGATTCTGTGGAATTGGCCCTGTCTaGAAGGGACATGGATGTGCCAATGGGCCATGGGCT +
Preference number: 6 (lower is better)
Translates to: GISNGFCGIGPV*KGHGCANGPWA
Trigger: AGCCCATGGCCCATTGGCACATCCATGTCCCTTTCAGACAGGGCCAATTCCACAGAATCCGTTCGAAATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS TCA 72 bp GCGACGCAGAAGATGGGTGATTTCTGCATTTCCATCTaGGGTACCGGGTTCATCTCACTAGGGAGTGCCAGA +
Preference number: 6 (lower is better)
Translates to: ATQKMGDFCISI*GTGFISLGSAR
Trigger: TCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCATCTTCTGCGTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560407.1
CDS CCA 72 bp ATGTTTGAGACGAAGAGGCTGGCATGGTGTCAGTGCTaGGGGTATTTCGAACGGATTCTGTGGAATTGGCCC +
Preference number: 6 (lower is better)
Translates to: MFETKRLAWCQC*GYFERILWNWP
Trigger: GGGCCAATTCCACAGAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS CCA 72 bp GATCAGTGCAGCATGTTTGAGACGAAGAGGCTGGCATaGTGTCAGTGCTGGGGGTATTTCGAACGGATTCTG +
Preference number: 6 (lower is better)
Translates to: DQCSMFETKRLA*CQCWGYFERIL
Trigger: CAGAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACATGCTGCACTGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS CCA 72 bp GTTCATAGCTACTCTCGGAGTCTTCCAACATCCTTGTaGTCTCCTGCACTTCAGGGGCACTGGGAACAACCA +
Preference number: 6 (lower is better)
Translates to: VHSYSRSLPTSL*SPALQGHWEQP
Trigger: TGGTTGTTCCCAGTGCCCCTGAAGTGCAGGAGACCACAAGGATGTTGGAAGACTCCGAGAGTAGCTATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
ENST00000560808.1
CDS CCA 72 bp GATCAGTGCAGCATGTTTGAGACGAAGAGGCTGGCATaGTGTCAGTGCTGGGGGTATTTCGAACGGATTGCT +
Preference number: 6 (lower is better)
Translates to: DQCSMFETKRLA*CQCWGYFERIA
Trigger: AGCAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACATGCTGCACTGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560262.5
CDS CCA 72 bp TTCCCTCCAGACCCTGAGGCTTTAGGTGTTCTGAATTaGACAGCTTCAGACATGGGTCCCATGCCCTTTGAG +
Preference number: 6 (lower is better)
Translates to: FPPDPEALGVLN*TASDMGPMPFE
Trigger: CTCAAAGGGCATGGGACCCATGTCTGAAGCTGTCCAATTCAGAACACCTAAAGCCTCAGGGTCTGGAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558964.5
ENST00000560328.1
CDS CCA 72 bp ACGAACTTACACTCTCGGAGTCTTCCAACATCCTTGTaGTCTCCTGCACTTCAGGGGCACTGGGAACAACCA +
Preference number: 6 (lower is better)
Translates to: TNLHSRSLPTSL*SPALQGHWEQP
Trigger: TGGTTGTTCCCAGTGCCCCTGAAGTGCAGGAGACCACAAGGATGTTGGAAGACTCCGAGAGTGTAAGTTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558886.1
CDS CAA 72 bp CTGGTTCATAGCTACTCTCGGAGTCTTCCAACATCCTaGTGGTCTCCTGCACTTCAGGGGCACTGGGAACAA +
Preference number: 6 (lower is better)
Translates to: LVHSYSRSLPTS*WSPALQGHWEQ
Trigger: TTGTTCCCAGTGCCCCTGAAGTGCAGGAGACCACAAGGATGTTGGAAGACTCCGAGAGTAGCTATGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
ENST00000560808.1
CDS TCA 72 bp GAACACAGAGTAGGTAAGGTTGTCTCCGTGAGGATCTaGTGCAGGTGTCCGCCACGTCAATTTGATGAAGCG +
Preference number: 6 (lower is better)
Translates to: EHRVGKVVSVRI*CRCPPRQFDEA
Trigger: CGCTTCATCAAATTGACGTGGCGGACACCTGCATCAGATCCTCACGGAGACAACCTTACCTACTCTGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
ENST00000560352.5
ENST00000560407.1
CDS TCA 72 bp CAGCAGACAGCCAGTCAGTTGCCGGGCCTGTACCATTaGTTGTTAGAGCAGCCACTCGGAAATTATACTCAG +
Preference number: 6 (lower is better)
Translates to: QQTASQLPGLYH*LLEQPLGNYTQ
Trigger: CTGAGTATAATTTCCGAGTGGCTGCTCTAACAATCAATGGTACAGGCCCGGCAACTGACTGGCTGTCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558807.1
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS TCA 72 bp TCTACAGCTTCCAGCGTGAGCGACGCAGAAGATGGGTaGTTTCTGCATTTCCATCTGAGGTACCGGGTTCAT +
Preference number: 6 (lower is better)
Translates to: STASSVSDAEDG*FLHFHLRYRVH
Trigger: ATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCATCTTCTGCGTCGCTCACGCTGGAAGCTGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560407.1
CDS GCA 72 bp AGCATGTTTGAGACGAAGAGGCTGGCATGGTGTCAGTaGTGGGGGTATTTCGAACGGATTCTGTGGAATTGG +
Preference number: 6 (lower is better)
Translates to: SMFETKRLAWCQ*WGYFERILWNW
Trigger: CCAATTCCACAGAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560328.1
ENST00000560808.1
CDS GCA 72 bp AGCATGTTTGAGACGAAGAGGCTGGCATGGTGTCAGTaGTGGGGGTATTTCGAACGGATTCTACAGCAGGAA +
Preference number: 6 (lower is better)
Translates to: SMFETKRLAWCQ*WGYFERILQQE
Trigger: TTCCTGCTGTAGAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558886.1
CDS CCA 72 bp TCCTTCCAGGTGGGCCATCTCTTTGGTCAGCTCATCTaGTTCATAGCTACTCTCGGAGTCTTCCAACATCCT +
Preference number: 6 (lower is better)
Translates to: SFQVGHLFGQLI*FIATLGVFQHP
Trigger: AGGATGTTGGAAGACTCCGAGAGTAGCTATGAACCAGATGAGCTGACCAAAGAGATGGCCCACCTGGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
ENST00000560808.1
CDS CCA 72 bp GGTCCTTCATTAGTCCTTCCAGGTGGGCCATCTCTTTaGTCAGCTCATCTGGTTCATAGCTACTCTCGGAGT +
Preference number: 6 (lower is better)
Translates to: GPSLVLPGGPSL*SAHLVHSYSRS
Trigger: ACTCCGAGAGTAGCTATGAACCAGATGAGCTGACCAAAGAGATGGCCCACCTGGAAGGACTAATGAAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
ENST00000560808.1
CDS CCA 72 bp GATCAGTGCAGCATGTTTGAGACGAAGAGGCTGGCATaGTGTCAGTGCTGGGGGTATTTCGAACGGATTCTA +
Preference number: 6 (lower is better)
Translates to: DQCSMFETKRLA*CQCWGYFERIL
Trigger: TAGAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACATGCTGCACTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558886.1
CDS CAA 90 bp TCAAAAGTTTCAGCAGACAGCCAGTCAGTTGCCGGGCCTGTACCATaGATTGTTAGAGCAGCCACTCGGAAATTATACTCAGTCCCCCGA +
Preference number: 6 (lower is better)
Translates to: SKVSADSQSVAGPVP*IVRAATRKLYSVPR
Trigger: TCGGGGGACTGAGTATAATTTCCGAGTGGCTGCTCTAACAATCAATGGTACAGGCCCGGCAACTGACTGGCTGTCTGCTGAAACTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558807.1
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS CCA 72 bp ATGTTTGAGACGAAGAGGCTGGCATGGTGTCAGTGCTaGGGGTATTTCGAACGGATTCTACAGCAGGAAAGT +
Preference number: 6 (lower is better)
Translates to: MFETKRLAWCQC*GYFERILQQES
Trigger: ACTTTCCTGCTGTAGAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCCTCTTCGTCTCAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558886.1
CDS CAA 72 bp TCAGCAGACAGCCAGTCAGTTGCCGGGCCTGTACCATaGATTGTTAGAGCAGCCACTCGGAAATTATACTCA +
Preference number: 6 (lower is better)
Translates to: SADSQSVAGPVP*IVRAATRKLYS
Trigger: TGAGTATAATTTCCGAGTGGCTGCTCTAACAATCAATGGTACAGGCCCGGCAACTGACTGGCTGTCTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558807.1
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS CAA 72 bp GAACAACAGCAGCGTGATGCACTAAAGTTCACAGACTaGAGCCATATCCACCCCAAGTCTGTGGCTTTCCAG +
Preference number: 6 (lower is better)
Translates to: EQQQRDALKFTD*SHIHPKSVAFQ
Trigger: CTGGAAAGCCACAGACTTGGGGTGGATATGGCTCAAGTCTGTGAACTTTAGTGCATCACGCTGCTGTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558807.1
CDS CAA 90 bp CCTCAGGATCTGGAAGAACCTTCAATTCAACTTCATCACTATACTTaGGTGGCCCACCACTTTCCACTACGCAGCGATAAAGCCCGCCAT +
Preference number: 6 (lower is better)
Translates to: PQDLEEPSIQLHHYT*VAHHFPLRSDKARH
Trigger: ATGGCGGGCTTTATCGCTGCGTAGTGGAAAGTGGTGGGCCACCAAAGTATAGTGATGAAGTTGAATTGAAGGTTCTTCCAGATCCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558485.1
ENST00000558964.5
ENST00000560262.5
CDS TCA 72 bp GGAAGTCCTGAAGCAACACATGGCAACACTACATCCTaGCCAATGACTCTGACTAAGGGAGAAGGCTGTTTC +
Preference number: 6 (lower is better)
Translates to: GSPEATHGNTTS*PMTLTKGEGCF
Trigger: GAAACAGCCTTCTCCCTTAGTCAGAGTCATTGGTCAGGATGTAGTGTTGCCATGTGTTGCTTCAGGACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558485.1
ENST00000558964.5
ENST00000560262.5
CDS TCA 72 bp TTCAAGGGTAAGTTCCAAGACTTCCAGACTCAGGTTTaGAGTCAGGTCCTGGTGAAGGTCGTCATGCTGTTG +
Preference number: 6 (lower is better)
Translates to: FKGKFQDFQTQV*SQVLVKVVMLL
Trigger: CAACAGCATGACGACCTTCACCAGGACCTGACTTCAAACCTGAGTCTGGAAGTCTTGGAACTTACCCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560328.1
ENST00000560808.1
CDS TCA 72 bp CAGCAGCCTCGATGCAATACAGGAACAACAGCAGCGTaGTGCACTAAAGTTCACAGACTTGAGCCATATCCA +
Preference number: 6 (lower is better)
Translates to: QQPRCNTGTTAA*CTKVHRLEPYP
Trigger: TGGATATGGCTCAAGTCTGTGAACTTTAGTGCATCACGCTGCTGTTGTTCCTGTATTGCATCGAGGCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558807.1
CDS CCA 72 bp GGTGGAGAAGTCGGAACTAATTCAAAGGTGGTCCCATaGGCTGTCATACTCCATGTACTTGATCTTCGACCT +
Preference number: 6 (lower is better)
Translates to: GGEVGTNSKVVP*AVILHVLDLRP
Trigger: AGGTCGAAGATCAAGTACATGGAGTATGACAGCCCATGGGACCACCTTTGAATTAGTTCCGACTTCTCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS CAA 90 bp GCAATACAGGAACAACAGCAGCGTGATGCACTAAAGTTCACAGACTaGAGCCATATCCACCCCAAGTCTGTGGCTTTCCAGTTTGACTCA +
Preference number: 6 (lower is better)
Translates to: AIQEQQQRDALKFTD*SHIHPKSVAFQFDS
Trigger: TGAGTCAAACTGGAAAGCCACAGACTTGGGGTGGATATGGCTCAAGTCTGTGAACTTTAGTGCATCACGCTGCTGTTGTTCCTGTATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558807.1
CDS TCA 72 bp AAAGGTGGTCCCATGGGCTGTCATACTCCATGTACTTaGTCTTCGACCTTTGGTCACCATCACAGAGAATTC +
Preference number: 6 (lower is better)
Translates to: KGGPMGCHTPCT*SSTFGHHHREF
Trigger: GAATTCTCTGTGATGGTGACCAAAGGTCGAAGATCAAGTACATGGAGTATGACAGCCCATGGGACCACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS GCA 72 bp ATCCTCAGTAACATCACTGATCTCCAGGCTACCACCTaGCAGCAATACCAATCTTTCAGAGCTTTCTGTGTC +
Preference number: 6 (lower is better)
Translates to: ILSNITDLQATT*QQYQSFRAFCV
Trigger: GACACAGAAAGCTCTGAAAGATTGGTATTGCTGGCAGGTGGTAGCCTGGAGATCAGTGATGTTACTGAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
CDS GCA 72 bp CTCATACAGGGGGATGCCTTCACCCACGTTATTAAATaGTTTCAGGGTAATCACATAGTGAGAGCTGGGATC +
Preference number: 6 (lower is better)
Translates to: LIQGDAFTHVIK*FQGNHIVRAGI
Trigger: GATCCCAGCTCTCACTATGTGATTACCCTGAAAGCATTTAATAACGTGGGTGAAGGCATCCCCCTGTATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS CCA 72 bp CCCGTTGTGGCTGGTGCATGTTCAAGGATTATCAGTTaGGCTCCAGCTTGTGCATTTCCAACATCATTTTCA +
Preference number: 6 (lower is better)
Translates to: PVVAGACSRIIS*APACAFPTSFS
Trigger: TGAAAATGATGTTGGAAATGCACAAGCTGGAGCCCAACTGATAATCCTTGAACATGCACCAGCCACAACGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
CDS CCA 72 bp CATTTGCATTCTTGTACTTGGTGTTTGCTGGGATGTTaGTTTTCCATCGGACGGTGTAGTATCGGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: HLHSCTWCLLGC*FSIGRCSIGSL
Trigger: CAGACTCCCGATACTACACCGTCCGATGGAAAACCAACATCCCAGCAAACACCAAGTACAAGAATGCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS CCA 72 bp ATTTTATCAGAGGAGTCCGCTTTAGGTGTTCTGAATTaGACAGCTTCAGACATGGGTCCCATGCCCTTTGAG +
Preference number: 6 (lower is better)
Translates to: ILSEESALGVLN*TASDMGPMPFE
Trigger: CTCAAAGGGCATGGGACCCATGTCTGAAGCTGTCCAATTCAGAACACCTAAAGCGGACTCCTCTGATAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000560262.5
CDS CCA 72 bp AGGAATTGGAGTATCAGTCATGATGGGGTTTGGGTCTaGAGACTTATCAATGGGTTTCAGCTCCAGTCTCTC +
Preference number: 6 (lower is better)
Translates to: RNWSISHDGVWV*RLINGFQLQSL
Trigger: GAGAGACTGGAGCTGAAACCCATTGATAAGTCTCCAGACCCAAACCCCATCATGACTGATACTCCAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS CCA 72 bp GTCAACTGGTGTGATATCTTGAGAGTTGCGAGGAATTaGAGTATCAGTCATGATGGGGTTTGGGTCTGGAGA +
Preference number: 6 (lower is better)
Translates to: VNWCDILRVARN*SISHDGVWVWR
Trigger: TCTCCAGACCCAAACCCCATCATGACTGATACTCCAATTCCTCGCAACTCTCAAGATATCACACCAGTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS CAA 72 bp TCCCGTTGTGGCTGGTGCATGTTCAAGGATTATCAGTaGGGCTCCAGCTTGTGCATTTCCAACATCATTTTC +
Preference number: 6 (lower is better)
Translates to: SRCGWCMFKDYQ*GSSLCISNIIF
Trigger: GAAAATGATGTTGGAAATGCACAAGCTGGAGCCCAACTGATAATCCTTGAACATGCACCAGCCACAACGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
CDS CAA 72 bp CAAAGGTGGTCCCATGGGCTGTCATACTCCATGTACTaGATCTTCGACCTTTGGTCACCATCACAGAGAATT +
Preference number: 6 (lower is better)
Translates to: QRWSHGLSYSMY*IFDLWSPSQRI
Trigger: AATTCTCTGTGATGGTGACCAAAGGTCGAAGATCAAGTACATGGAGTATGACAGCCCATGGGACCACCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS TCA 72 bp TTTCAATGGTGTAATAGCGCTGTTTATAGTCCACTTTaGTGGTCTGGGCATGAGGGCTGCCAATGCCATAAC +
Preference number: 6 (lower is better)
Translates to: FQWCNSAVYSPL*WSGHEGCQCHN
Trigger: GTTATGGCATTGGCAGCCCTCATGCCCAGACCATCAAAGTGGACTATAAACAGCGCTATTACACCATTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS TCA 72 bp TCCTCTGACTCATGCCCTCTGTATGAATTTCGCCTTTaGTGGATATTGCTGTCCATGGAGTTGTCAACTGGT +
Preference number: 6 (lower is better)
Translates to: SSDSCPLYEFRL*WILLSMELSTG
Trigger: ACCAGTTGACAACTCCATGGACAGCAATATCCATCAAAGGCGAAATTCATACAGAGGGCATGAGTCAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS CCA 72 bp AAGAACCTTCAATTCAACTTCATCACTATACTTTGGTaGCCCACCACTTTCCACTACGCAGCGATAAAGCCC +
Preference number: 6 (lower is better)
Translates to: KNLQFNFITILW*PTTFHYAAIKP
Trigger: GGGCTTTATCGCTGCGTAGTGGAAAGTGGTGGGCCACCAAAGTATAGTGATGAAGTTGAATTGAAGGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558485.1
ENST00000558964.5
ENST00000560262.5
CDS CCA 72 bp AATCTTGTAGCCAGTAATCTGCCCATTTTGTGTGGCTaGAGCAGGTGGCTGCCAGTGAATCATAATACTCTT +
Preference number: 6 (lower is better)
Translates to: NLVASNLPILCG*SRWLPVNHNTL
Trigger: AAGAGTATTATGATTCACTGGCAGCCACCTGCTCCAGCCACACAAAATGGGCAGATTACTGGCTACAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS CAA 90 bp TTGATGGATATTGCTGTCCATGGAGTTGTCAACTGGTGTGATATCTaGAGAGTTGCGAGGAATTGGAGTATCAGTCATGATGGGGTTTGG +
Preference number: 6 (lower is better)
Translates to: LMDIAVHGVVNWCDI*RVARNWSISHDGVW
Trigger: CCAAACCCCATCATGACTGATACTCCAATTCCTCGCAACTCTCAAGATATCACACCAGTTGACAACTCCATGGACAGCAATATCCATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS TCA 72 bp TATCTTGAGAGTTGCGAGGAATTGGAGTATCAGTCATaGTGGGGTTTGGGTCTGGAGACTTATCAATGGGTT +
Preference number: 6 (lower is better)
Translates to: YLESCEELEYQS*WGLGLETYQWV
Trigger: AACCCATTGATAAGTCTCCAGACCCAAACCCCATCATGACTGATACTCCAATTCCTCGCAACTCTCAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS TCA 72 bp TTGCTGTCCATGGAGTTGTCAACTGGTGTGATATCTTaGGAGTTGCGAGGAATTGGAGTATCAGTCATGATG +
Preference number: 6 (lower is better)
Translates to: LLSMELSTGVIS*ELRGIGVSVMM
Trigger: CATCATGACTGATACTCCAATTCCTCGCAACTCTCAAGATATCACACCAGTTGACAACTCCATGGACAGCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS TCA 72 bp GATGGATATTGCTGTCCATGGAGTTGTCAACTGGTGTaGTATCTTGAGAGTTGCGAGGAATTGGAGTATCAG +
Preference number: 6 (lower is better)
Translates to: DGYCCPWSCQLV*YLESCEELEYQ
Trigger: CTGATACTCCAATTCCTCGCAACTCTCAAGATATCACACCAGTTGACAACTCCATGGACAGCAATATCCATC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS GCA 72 bp AATTCCCTTTGTACTTATGAGAGCCATTCACTGATTTaGAGGCAGCTCGTTTCTTTTTCTGGTGAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: NSLCTYESHSLI*RQLVSFSGERW
Trigger: CCACCTCTCACCAGAAAAAGAAACGAGCTGCCTGCAAATCAGTGAATGGCTCTCATAAGTACAAAGGGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS CCA 72 bp TGGAAGAACCTTCAATTCAACTTCATCACTATACTTTaGTGGCCCACCACTTTCCACTACGCAGCGATAAAG +
Preference number: 6 (lower is better)
Translates to: WKNLQFNFITIL*WPTTFHYAAIK
Trigger: CTTTATCGCTGCGTAGTGGAAAGTGGTGGGCCACCAAAGTATAGTGATGAAGTTGAATTGAAGGTTCTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558485.1
ENST00000558964.5
ENST00000560262.5
CDS CCA 72 bp CCTTTGATGGATATTGCTGTCCATGGAGTTGTCAACTaGTGTGATATCTTGAGAGTTGCGAGGAATTGGAGT +
Preference number: 6 (lower is better)
Translates to: PLMDIAVHGVVN*CDILRVARNWS
Trigger: ACTCCAATTCCTCGCAACTCTCAAGATATCACACCAGTTGACAACTCCATGGACAGCAATATCCATCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS CAA 72 bp TGGAAGTTTGATAACTCTATCATCCAGAAGAAGGGGTaGTCTGTTCTGTTCCCACCTCACAAATGGGACCAA +
Preference number: 6 (lower is better)
Translates to: WKFDNSIIQKKG*SVLFPPHKWDQ
Trigger: TTGGTCCCATTTGTGAGGTGGGAACAGAACAGACAACCCCTTCTTCTGGATGATAGAGTTATCAAACTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
CDS CAA 72 bp CTGGAAGAACCTTCAATTCAACTTCATCACTATACTTaGGTGGCCCACCACTTTCCACTACGCAGCGATAAA +
Preference number: 6 (lower is better)
Translates to: LEEPSIQLHHYT*VAHHFPLRSDK
Trigger: TTTATCGCTGCGTAGTGGAAAGTGGTGGGCCACCAAAGTATAGTGATGAAGTTGAATTGAAGGTTCTTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558485.1
ENST00000558964.5
ENST00000560262.5
CDS CAA 90 bp CATTCCACTTGGAAGTTTGATAACTCTATCATCCAGAAGAAGGGGTaGTCTGTTCTGTTCCCACCTCACAAATGGGACCAAATCTGCATT +
Preference number: 6 (lower is better)
Translates to: HSTWKFDNSIIQKKG*SVLFPPHKWDQICI
Trigger: AATGCAGATTTGGTCCCATTTGTGAGGTGGGAACAGAACAGACAACCCCTTCTTCTGGATGATAGAGTTATCAAACTTCCAAGTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
CDS CAA 90 bp TCTCCTTCAGTTGCATTGCTGATAACCAGCATTCCACTTGGAAGTTaGATAACTCTATCATCCAGAAGAAGGGGTTGTCTGTTCTGTTCC +
Preference number: 6 (lower is better)
Translates to: SPSVALLITSIPLGS*ITLSSRRRGCLFCS
Trigger: GGAACAGAACAGACAACCCCTTCTTCTGGATGATAGAGTTATCAAACTTCCAAGTGGAATGCTGGTTATCAGCAATGCAACTGAAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
CDS CCA 72 bp TCCTTCAGTTGCATTGCTGATAACCAGCATTCCACTTaGAAGTTTGATAACTCTATCATCCAGAAGAAGGGG +
Preference number: 6 (lower is better)
Translates to: SFSCIADNQHST*KFDNSIIQKKG
Trigger: CCCCTTCTTCTGGATGATAGAGTTATCAAACTTCCAAGTGGAATGCTGGTTATCAGCAATGCAACTGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558485.1
ENST00000558964.5
ENST00000560262.5
CDS CCA 72 bp GTTGGGATGGCAACATCATGTTCAAGGATTATCAGTTaGGCTCCAGCTTGTGCATTTCCAACATCATTTTCA +
Preference number: 6 (lower is better)
Translates to: VGMATSCSRIIS*APACAFPTSFS
Trigger: TGAAAATGATGTTGGAAATGCACAAGCTGGAGCCCAACTGATAATCCTTGAACATGATGTTGCCATCCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS CAA 72 bp CCTTCATCAGGTTTATTGTGTTTGGAATGCACCACATaGCTGATAAATAAAGATCCATCCGGGAGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: PSSGLLCLECTT*LINKDPSGRSW
Trigger: CCAGCTTCTCCCGGATGGATCTTTATTTATCAGCAATGTGGTGCATTCCAAACACAATAAACCTGATGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
CDS CAA 72 bp GTTGCATTGCTGATAACCAGCATTCCACTTGGAAGTTaGATAACTCTATCATCCAGAAGAAGGGGTTGTCTG +
Preference number: 6 (lower is better)
Translates to: VALLITSIPLGS*ITLSSRRRGCL
Trigger: CAGACAACCCCTTCTTCTGGATGATAGAGTTATCAAACTTCCAAGTGGAATGCTGGTTATCAGCAATGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558485.1
ENST00000558964.5
ENST00000560262.5
CDS CAA 72 bp ATTGCTGTCCATGGAGTTGTCAACTGGTGTGATATCTaGAGAGTTGCGAGGAATTGGAGTATCAGTCATGAT +
Preference number: 6 (lower is better)
Translates to: IAVHGVVNWCDI*RVARNWSISHD
Trigger: ATCATGACTGATACTCCAATTCCTCGCAACTCTCAAGATATCACACCAGTTGACAACTCCATGGACAGCAAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS CAA 72 bp TGTTGGGATGGCAACATCATGTTCAAGGATTATCAGTaGGGCTCCAGCTTGTGCATTTCCAACATCATTTTC +
Preference number: 6 (lower is better)
Translates to: CWDGNIMFKDYQ*GSSLCISNIIF
Trigger: GAAAATGATGTTGGAAATGCACAAGCTGGAGCCCAACTGATAATCCTTGAACATGATGTTGCCATCCCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS TCA 72 bp TTTGGAATTCCCTTTGTACTTATGAGAGCCATTCACTaGTTTGCAGGCAGCTCGTTTCTTTTTCTGGTGAGA +
Preference number: 6 (lower is better)
Translates to: FGIPFVLMRAIH*FAGSSFLFLVR
Trigger: TCTCACCAGAAAAAGAAACGAGCTGCCTGCAAATCAGTGAATGGCTCTCATAAGTACAAAGGGAATTCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1
CDS GCA 72 bp TGCATGTTCAAGGATTATCAGTTGGGCTCCAGCTTGTaGATTTCCAACATCATTTTCAGCAATGCACTGATA +
Preference number: 6 (lower is better)
Translates to: CMFKDYQLGSSL*ISNIIFSNALI
Trigger: TATCAGTGCATTGCTGAAAATGATGTTGGAAATGCACAAGCTGGAGCCCAACTGATAATCCTTGAACATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
CDS CCA 72 bp AAGAAGGGGTTGTCTGTTCTGTTCCCACCTCACAAATaGGACCAAATCTGCATTAACTTCACAATTCAGAAT +
Preference number: 6 (lower is better)
Translates to: KKGLSVLFPPHK*DQICINFTIQN
Trigger: ATTCTGAATTGTGAAGTTAATGCAGATTTGGTCCCATTTGTGAGGTGGGAACAGAACAGACAACCCCTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
CDS TCA 72 bp ATTTTTCATCCATTTAATGGTTGGAGTAGGAAGTCCTaGAGCAACACATGGCAACACTACATCCTGACCAAT +
Preference number: 6 (lower is better)
Translates to: IFHPFNGWSRKS*SNTWQHYILTN
Trigger: ATTGGTCAGGATGTAGTGTTGCCATGTGTTGCTTCAGGACTTCCTACTCCAACCATTAAATGGATGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558485.1
ENST00000558964.5
ENST00000560262.5
CDS GCA 72 bp ATCATGTTCAAGGATTATCAGTTGGGCTCCAGCTTGTaGATTTCCAACATCATTTTCAGCAATGCACTGATA +
Preference number: 6 (lower is better)
Translates to: IMFKDYQLGSSL*ISNIIFSNALI
Trigger: TATCAGTGCATTGCTGAAAATGATGTTGGAAATGCACAAGCTGGAGCCCAACTGATAATCCTTGAACATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560328.1
CDS CAA 72 bp CTACAGCTAGTATCTATTGTGTTCCAGTCTTGCCAATaGTTATTCTTACCATCTAGGTCACTTTCAAAAGTT +
Preference number: 6 (lower is better)
Translates to: LQLVSIVFQSCQ*LFLPSRSLSKV
Trigger: AACTTTTGAAAGTGACCTAGATGGTAAGAATAACAATTGGCAAGACTGGAACACAATAGATACTAGCTGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558807.1
CDS TCA 72 bp GTCACTTCACATTCAAATACAATATCCATAGATTCGTaGGCATATATATTAGTAGGCTGCTTCAGGAATTCA +
Preference number: 6 (lower is better)
Translates to: VTSHSNTISIDS*AYILVGCFRNS
Trigger: TGAATTCCTGAAGCAGCCTACTAATATATATGCTCACGAATCTATGGATATTGTATTTGAATGTGAAGTGAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261908.11
ENST00000339362.9
ENST00000558964.5
ENST00000560262.5
ENST00000560328.1