Pregenerated sensors for NENF (Homo sapiens)
Ensembl gene IDs: ENSG00000117691Ensembl transcript IDs: ENST00000366988.5, ENST00000472389.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CCACTGCCCAGCCAGCTGATACTGACATCTAGGAGGTGTCCCACTTaGGCTCTTATTGATCCCTGGTGTGCAGACAGGGGTCCCCAGGTA | + |
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Preference number: 2 (lower is better) Translates to: PLPSQLILTSRRCPT*ALIDPWCADRGPQV Trigger: TACCTGGGGACCCCTGTCTGCACACCAGGGATCAATAAGAGCCAAAGTGGGACACCTCCTAGATGTCAGTATCAGCTGGCTGGGCAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366988.5 |
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| 3UTR-3UTR TCA 90 bp | AAGTATAAAGTAAAGGTCGCTCAAAATTCCACTGCCCAGCCAGCTGATACTGACCACTTTGGCTCTTATTaGTCCCTGGTGTGCAGACAG | + |
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Preference number: 2 (lower is better) Translates to: KYKVKVAQNSTAQPADTDHFGSY*SLVCRQ Trigger: CTGTCTGCACACCAGGGATCAATAAGAGCCAAAGTG...GTCAGTATCAGCTGGCTGGGCAGTGGAATTTTGAGCGACCTTTACTTTATACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366988.5 |
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| 3UTR-3UTR CAA 90 bp | AAAATTCCACTGCCCAGCCAGCTGATACTGACATCTAGGAGGTGTCCCACTTTGGACAACAGGAGGCATTaGCTCTTCCAGGGTAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: KIPLPSQLILTSRRCPTLDNRRH*LFQGKH Trigger: ATGCTTACCCTGGAAGAGCAAATGCCTCCTGTTGTC...CAAAGTGGGACACCTCCTAGATGTCAGTATCAGCTGGCTGGGCAGTGGAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366988.5 |
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| 3UTR-3UTR CAA 90 bp | AAGTATAAAGTAAAGGTCGCTCAAAATTCCACTGCCCAGCCAGCTGATACTGACTCCAGGCAGCCAGTTTaGCAGGAGATTCAGCACCTA | + |
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Preference number: 3 (lower is better) Translates to: KYKVKVAQNSTAQPADTDSRQPV*QEIQHL Trigger: TAGGTGCTGAATCTCCTGCAAAACTGGCTGCCTGGA...GTCAGTATCAGCTGGCTGGGCAGTGGAATTTTGAGCGACCTTTACTTTATACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366988.5 |
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| CDS-3UTR GCA 90 bp | TGGCTCAGGGCCTCCAGGCAGCCAGTTTTGCAGGAGATTCAGCACCTAGTGTCTACGCTCCCAAGAACCTaGTCCTGCAGGGGGAACATC | + |
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Preference number: 4 (lower is better) Translates to: WLRASRQPVLQEIQHLVSTLPRT*SCRGNI Trigger: GATGTTCCCCCTGCAGGAGCAGGTTCTTGGGAGCGT...AGACACTAGGTGCTGAATCTCCTGCAAAACTGGCTGCCTGGAGGCCCTGAGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366988.5 |
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| CDS-3UTR TCA 90 bp | AAGTATAAAGTAAAGGTCGCTCAAAATTCCACTGCCCAGCCAGCTGATACTGACCCAGCTCCTCCTCGGTaGAAAGCCGCACTGGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: KYKVKVAQNSTAQPADTDPAPPR*KAALGA Trigger: GGCCCCCAGTGCGGCTTTTCACCGAGGAGGAGCTGG...GTCAGTATCAGCTGGCTGGGCAGTGGAATTTTGAGCGACCTTTACTTTATACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366988.5 |
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| 3UTR CAA 72 bp | AGCCAGCTGATACTGACATCTAGGAGGTGTCCCACTTaGGCTCTTATTGATCCCTGGTGTGCAGACAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SQLILTSRRCPT*ALIDPWCADRG Trigger: ACCCCTGTCTGCACACCAGGGATCAATAAGAGCCAAAGTGGGACACCTCCTAGATGTCAGTATCAGCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366988.5 |
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| CDS-3UTR TCA 90 bp | CTCAAAATTCCACTGCCCAGCCAGCTGATACTGACATCTAGGAGGTGTCCCACTCACTTTGGCTCTTATTaGTCCCTGGTGTGCAGACAG | + |
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Preference number: 4 (lower is better) Translates to: LKIPLPSQLILTSRRCPTHFGSY*SLVCRQ Trigger: CTGTCTGCACACCAGGGATCAATAAGAGCCAAAGTG...AGTGGGACACCTCCTAGATGTCAGTATCAGCTGGCTGGGCAGTGGAATTTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366988.5 |
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| CDS-3UTR CCA 90 bp | AAAATTCCACTGCCCAGCCAGCTGATACTGACATCTAGGAGGTGTCCCACTTTGTCACTGCCAAGTAGATaGGCTGATCTTCCTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: KIPLPSQLILTSRRCPTLSLPSR*ADLPPP Trigger: GGGAGGAGGAAGATCAGCCCATCTACTTGGCAGTGA...CAAAGTGGGACACCTCCTAGATGTCAGTATCAGCTGGCTGGGCAGTGGAATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366988.5 |
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| CDS-3UTR TCA 90 bp | AAGTATAAAGTAAAGGTCGCTCAAAATTCCACTGCCCAGCCAGCTGATACTGACGGTAGACAGAACCCCTaGCCAAGGACAACAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: KYKVKVAQNSTAQPADTDGRQNP*PRTTGG Trigger: GCCTCCTGTTGTCCTTGGTCAGGGGTTCTGTCTACC...GTCAGTATCAGCTGGCTGGGCAGTGGAATTTTGAGCGACCTTTACTTTATACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366988.5 |
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| CDS-3UTR CCA 90 bp | CTGTCAAGCACAGAAAAGTATAAAGTAAAGGTCGCTCAAAATTCCACTGCCCAGGCTCTTATTGATCCCTaGTGTGCAGACAGGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LSSTEKYKVKVAQNSTAQALIDP*CADRGP Trigger: GGGACCCCTGTCTGCACACCAGGGATCAATAAGAGC...CTGGGCAGTGGAATTTTGAGCGACCTTTACTTTATACTTTTCTGTGCTTGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000366988.5 |
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| CDS-3UTR CCA 90 bp | AAGTATAAAGTAAAGGTCGCTCAAAATTCCACTGCCCAGCCAGCTGATACTGACGGAGGTGTCCCACTTTaGCTCTTATTGATCCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: KYKVKVAQNSTAQPADTDGGVPL*LLLIPG Trigger: ACCAGGGATCAATAAGAGCCAAAGTGGGACACCTCC...GTCAGTATCAGCTGGCTGGGCAGTGGAATTTTGAGCGACCTTTACTTTATACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366988.5 |
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| CDS CCA 90 bp | ACTGCACTCAACTGCCTCTCTCGTCCCTCGCTCCCCTCCTCTCTCTaGCTCCTTCCTTCCACCTACAGAGATCCTCAGGCTCCACTCCCA | + |
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Preference number: 5 (lower is better) Translates to: TALNCLSRPSLPSSL*LLPSTYRDPQAPLP Trigger: TGGGAGTGGAGCCTGAGGATCTCTGTAGGTGGAAGGAAGGAGCCAGAGAGAGGAGGGGAGCGAGGGACGAGAGAGGCAGTTGAGTGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472389.1 |
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| CDS-3UTR CAA 90 bp | CTCAGGGCCTCCAGGCAGCCAGTTTTGCAGGAGATTCAGCACCTAGTGTCTTCCAGGGCCTCCAGTTCCTaGGCCGTGAGACCCGTAGTG | + |
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Preference number: 5 (lower is better) Translates to: LRASRQPVLQEIQHLVSSRASSS*AVRPVV Trigger: CACTACGGGTCTCACGGCCAAGGAACTGGAGGCCCT...GGAAGACACTAGGTGCTGAATCTCCTGCAAAACTGGCTGCCTGGAGGCCCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366988.5 |
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| CDS-3UTR CAA 90 bp | CTCAAAATTCCACTGCCCAGCCAGCTGATACTGACATCTAGGAGGTGTCCCACTTCCAGGCAGCCAGTTTaGCAGGAGATTCAGCACCTA | + |
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Preference number: 5 (lower is better) Translates to: LKIPLPSQLILTSRRCPTSRQPV*QEIQHL Trigger: TAGGTGCTGAATCTCCTGCAAAACTGGCTGCCTGGA...AGTGGGACACCTCCTAGATGTCAGTATCAGCTGGCTGGGCAGTGGAATTTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366988.5 |
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| CDS-3UTR CAA 90 bp | ACTTTGGCTCTTATTGATCCCTGGTGTGCAGACAGGGGTCCCCAGGTAGACAGACCACTTTGGCTCTTATaGATCCCTGGTGTGCAGACA | + |
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Preference number: 5 (lower is better) Translates to: TLALIDPWCADRGPQVDRPLWLL*IPGVQT Trigger: TGTCTGCACACCAGGGATCAATAAGAGCCAAAGTGG...TCTGTCTACCTGGGGACCCCTGTCTGCACACCAGGGATCAATAAGAGCCAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366988.5 |
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| CDS-3UTR CAA 90 bp | CTGTCAAGCACAGAAAAGTATAAAGTAAAGGTCGCTCAAAATTCCACTGCCCAGAGGAGGTGTCCCACTTaGGCTCTTATTGATCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: LSSTEKYKVKVAQNSTAQRRCPT*ALIDPW Trigger: CCAGGGATCAATAAGAGCCAAAGTGGGACACCTCCT...CTGGGCAGTGGAATTTTGAGCGACCTTTACTTTATACTTTTCTGTGCTTGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366988.5 |
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| CDS GCA 90 bp | ACCAAGGGTCTTTTCTCAGTCCTCATCTTGCAGTTCTGGCACTCTTaGTGTAACCTCAGTGGTGAACTCTCTCTTTCCTTAGATTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: TKGLFSVLILQFWHS*CNLSGELSLSLDSC Trigger: ACAAGAATCTAAGGAAAGAGAGAGTTCACCACTGAGGTTACAGCAAGAGTGCCAGAACTGCAAGATGAGGACTGAGAAAAGACCCTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472389.1 |
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| CDS-3UTR CAA 90 bp | CTGTCAAGCACAGAAAAGTATAAAGTAAAGGTCGCTCAAAATTCCACTGCCCAGGACAACAGGAGGCATTaGCTCTTCCAGGGTAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: LSSTEKYKVKVAQNSTAQDNRRH*LFQGKH Trigger: ATGCTTACCCTGGAAGAGCAAATGCCTCCTGTTGTC...CTGGGCAGTGGAATTTTGAGCGACCTTTACTTTATACTTTTCTGTGCTTGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366988.5 |
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| CDS CCA 72 bp | TCTTGTGCCAGTGGTCCCAAAGATCATCGGGTCAGTTaGAGAGTCCCTCCTCCCCGCCATAGCGGGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SCASGPKDHRVS*RVPPPRHSGPA Trigger: AGCTGGCCCGCTATGGCGGGGAGGAGGGACTCTCCAACTGACCCGATGATCTTTGGGACCACTGGCACAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472389.1 |
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| CDS CCA 72 bp | AACTGCCTCTCTCGTCCCTCGCTCCCCTCCTCTCTCTaGCTCCTTCCTTCCACCTACAGAGATCCTCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: NCLSRPSLPSSL*LLPSTYRDPQA Trigger: AGCCTGAGGATCTCTGTAGGTGGAAGGAAGGAGCCAGAGAGAGGAGGGGAGCGAGGGACGAGAGAGGCAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472389.1 |
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| CDS CAA 90 bp | CTTCCTTCCACCTACAGAGATCCTCAGGCTCCACTCCCAAAACAATaGTTTCCTACCCCTGTTTCCATCTCAAGGTCCTCTCTCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LPSTYRDPQAPLPKQ*FPTPVSISRSSLSQ Trigger: CTGAGAGAGAGAGGACCTTGAGATGGAAACAGGGGTAGGAAACAATTGTTTTGGGAGTGGAGCCTGAGGATCTCTGTAGGTGGAAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472389.1 |
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| CDS GCA 72 bp | CTTTTCTCAGTCCTCATCTTGCAGTTCTGGCACTCTTaGTGTAACCTCAGTGGTGAACTCTCTCTTTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: LFSVLILQFWHS*CNLSGELSLSL Trigger: TAAGGAAAGAGAGAGTTCACCACTGAGGTTACAGCAAGAGTGCCAGAACTGCAAGATGAGGACTGAGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472389.1 |
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