RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NEMP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000189362

Ensembl transcript IDs: ENST00000343105.9, ENST00000409150.8, ENST00000414176.5, ENST00000421038.1, ENST00000444545.5, ENST00000492292.1

Found 270 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCATGAAGAGCTGCTTCCTTCCCTCAGCAGTACCTCTTCCCCCTaGCCCAGCGGCTGTCCTGGCTGGGATGTACCTGGCAGCCCCAGC +
Preference number: 1 (lower is better)
Translates to: AHEELLPSLSSTSSP*PSGCPGWDVPGSPS
Trigger: GCTGGGGCTGCCAGGTACATCCCAGCCAGGACAGCCGCTGGGCCAGGGGGAAGAGGTACTGCTGAGGGAAGGAAGCAGCTCTTCATGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR GCA 90 bp CAGTGGGTAGTGCAGACTCCAGGAGGACATGAGGAGGATTATGGCTaGATAGGCAAACTGAGGCACGGCCACACCAGCATAGACCAGAAC +
Preference number: 1 (lower is better)
Translates to: QWVVQTPGGHEEDYG*IGKLRHGHTSIDQN
Trigger: GTTCTGGTCTATGCTGGTGTGGCCGTGCCTCAGTTTGCCTATGCAGCCATAATCCTCCTCATGTCCTCCTGGAGTCTGCACTACCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
3UTR CCA 90 bp TACCTCTTCCCCCTGGCCCAGCGGCTGTCCTGGCTGGGATGTACCTaGCAGCCCCAGCAGATTGTTCATGTGTTATTTACTCATACGCAT +
Preference number: 1 (lower is better)
Translates to: YLFPLAQRLSWLGCT*QPQQIVHVLFTHTH
Trigger: ATGCGTATGAGTAAATAACACATGAACAATCTGCTGGGGCTGCCAGGTACATCCCAGCCAGGACAGCCGCTGGGCCAGGGGGAAGAGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR TCA 90 bp ACTAGAGGGAAACTGGTCCATCACCCCAGACAGTCTGAGAAGCACTaGCAAGAGCCGCAGACTACAGTGTCCATTGCTGCGGGGCACAAA +
Preference number: 1 (lower is better)
Translates to: TRGKLVHHPRQSEKH*QEPQTTVSIAAGHK
Trigger: TTTGTGCCCCGCAGCAATGGACACTGTAGTCTGCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCAGTTTCCCTCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR TCA 90 bp TATAACTGCATGCTCTCAGTGGGTAGTGCAGACTCCAGGAGGACATaGGGAGGATTATGGCTGCATAGGCAAACTGAGGCACGGCCACAC +
Preference number: 1 (lower is better)
Translates to: YNCMLSVGSADSRRT*GGLWLHRQTEARPH
Trigger: GTGTGGCCGTGCCTCAGTTTGCCTATGCAGCCATAATCCTCCTCATGTCCTCCTGGAGTCTGCACTACCCACTGAGAGCATGCAGTTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
3UTR GCA 90 bp CCAGAACCAGGGAGAGGAGTCGCAGCATCCACATCAGAAGACTTCTaGTCCTGTCGTCTGCAAGGGGCCCATGCTTGTAACAAACAACAA +
Preference number: 1 (lower is better)
Translates to: PEPGRGVAASTSEDF*SCRLQGAHACNKQQ
Trigger: TTGTTGTTTGTTACAAGCATGGGCCCCTTGCAGACGACAGGAGCAGAAGTCTTCTGATGTGGATGCTGCGACTCCTCTCCCTGGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
3UTR GCA 90 bp CTCTTCAATGTCATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTaGTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGT +
Preference number: 1 (lower is better)
Translates to: LFNVMPPSRLSQKAA*SCCHLKVPLCLPAG
Trigger: ACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATGACATTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR GCA 90 bp GAGGAGTCGCAGCATCCACATCAGAAGACTTCTGCTCCTGTCGTCTaGAAGGGGCCCATGCTTGTAACAAACAACAAAGCTGAAAAATCC +
Preference number: 1 (lower is better)
Translates to: EESQHPHQKTSAPVV*KGPMLVTNNKAEKS
Trigger: GGATTTTTCAGCTTTGTTGTTTGTTACAAGCATGGGCCCCTTGCAGACGACAGGAGCAGAAGTCTTCTGATGTGGATGCTGCGACTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
3UTR CCA 90 bp AAACCACTGCTCCATTTTCCACCTCATATAACTGCATGCTCTCAGTaGGTAGTGCAGACTCCAGGAGGACATGAGGAGGATTATGGCTGC +
Preference number: 1 (lower is better)
Translates to: KPLLHFPPHITACSQ*VVQTPGGHEEDYGC
Trigger: GCAGCCATAATCCTCCTCATGTCCTCCTGGAGTCTGCACTACCCACTGAGAGCATGCAGTTATATGAGGTGGAAAATGGAGCAGTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414176.5
3UTR GCA 90 bp AATAAGGCTAACAGTCACACCCAAATAGTTCACTCTTCAATGTCATaGCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTC +
Preference number: 1 (lower is better)
Translates to: NKANSHTQIVHSSMS*HPAGSLRRQLAPVV
Trigger: GACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATGACATTGAAGAGTGAACTATTTGGGTGTGACTGTTAGCCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CCA 90 bp TGTTGTTCTTCTCTCTTTGGCTGTTTTTACTGTGATGGTTACACCTaGCTAGCTGCCCATGAAGAGCTGCTTCCTTCCCTCAGCAGTACC +
Preference number: 1 (lower is better)
Translates to: CCSSLFGCFYCDGYT*LAAHEELLPSLSST
Trigger: GGTACTGCTGAGGGAAGGAAGCAGCTCTTCATGGGCAGCTAGCCAGGTGTAACCATCACAGTAAAAACAGCCAAAGAGAGAAGAACAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CCA 90 bp AAGAGCCGCAGACTACAGTGTCCATTGCTGCGGGGCACAAATGACTaGTATGTGTATAACATCAGCAGATGTAGTCACCTCTTGAATGCC +
Preference number: 1 (lower is better)
Translates to: KSRRLQCPLLRGTND*YVYNISRCSHLLNA
Trigger: GGCATTCAAGAGGTGACTACATCTGCTGATGTTATACACATACCAGTCATTTGTGCCCCGCAGCAATGGACACTGTAGTCTGCGGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CCA 90 bp GCACCTGAAGATCTTGTCTACCTGAGTCAAAGGATACATCAGGGCTaGATTTCTACCAGTGCTGCATCTCAGTGTGGTCTTGCACAAGTT +
Preference number: 1 (lower is better)
Translates to: APEDLVYLSQRIHQG*ISTSAASQCGLAQV
Trigger: AACTTGTGCAAGACCACACTGAGATGCAGCACTGGTAGAAATCCAGCCCTGATGTATCCTTTGACTCAGGTAGACAAGATCTTCAGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CCA 90 bp AAGGATACATCAGGGCTGGATTTCTACCAGTGCTGCATCTCAGTGTaGTCTTGCACAAGTTATTTAACCTCTCATGAGCTCAGTTCCACC +
Preference number: 1 (lower is better)
Translates to: KDTSGLDFYQCCISV*SCTSYLTSHELSST
Trigger: GGTGGAACTGAGCTCATGAGAGGTTAAATAACTTGTGCAAGACCACACTGAGATGCAGCACTGGTAGAAATCCAGCCCTGATGTATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR GCA 90 bp CTACCTGAGTCAAAGGATACATCAGGGCTGGATTTCTACCAGTGCTaGATCTCAGTGTGGTCTTGCACAAGTTATTTAACCTCTCATGAG +
Preference number: 1 (lower is better)
Translates to: LPESKDTSGLDFYQC*ISVWSCTSYLTSHE
Trigger: CTCATGAGAGGTTAAATAACTTGTGCAAGACCACACTGAGATGCAGCACTGGTAGAAATCCAGCCCTGATGTATCCTTTGACTCAGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR GCA 90 bp GGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTaGAGGTGTCTTCAAACTTCCACATCCATTATGTTGTCTATCTTG +
Preference number: 1 (lower is better)
Translates to: GSLLLLSPKSTSLSS*RCLQTSTSIMLSIL
Trigger: CAAGATAGACAACATAATGGATGTGGAAGTTTGAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CCA 90 bp GACCAACACTTGGTAGTAGCCTGTGAGCTGTACTTTGGAAAACACTaGTCCAGCATGTCTCAGGTCTCTTTAAGGACTTATACTGACGAA +
Preference number: 1 (lower is better)
Translates to: DQHLVVACELYFGKH*SSMSQVSLRTYTDE
Trigger: TTCGTCAGTATAAGTCCTTAAAGAGACCTGAGACATGCTGGACCAGTGTTTTCCAAAGTACAGCTCACAGGCTACTACCAAGTGTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CCA 90 bp AGTGTATCTTACAAAAGTATTACTAGTGATGAACTAGAGGGAAACTaGTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGC +
Preference number: 1 (lower is better)
Translates to: SVSYKSITSDELEGN*SITPDSLRSTDKSR
Trigger: GCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCAGTTTCCCTCTAGTTCATCACTAGTAATACTTTTGTAAGATACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR GCA 90 bp TTTCTCCACAGCAAATGTTTTTGCCACCGTTCACTAGAACAGTTCTaGCTAACTTTAATAGAATCCCTGCCCTTTGCCCACTTCCTTGTC +
Preference number: 1 (lower is better)
Translates to: FLHSKCFCHRSLEQF*LTLIESLPFAHFLV
Trigger: GACAAGGAAGTGGGCAAAGGGCAGGGATTCTATTAAAGTTAGGCAGAACTGTTCTAGTGAACGGTGGCAAAAACATTTGCTGTGGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR TCA 90 bp AAAACACTGGTCCAGCATGTCTCAGGTCTCTTTAAGGACTTATACTaGCGAACTATAGGAAGAGTATTGCAGAGTCTTCTGACACAGGTT +
Preference number: 1 (lower is better)
Translates to: KTLVQHVSGLFKDLY*RTIGRVLQSLLTQV
Trigger: AACCTGTGTCAGAAGACTCTGCAATACTCTTCCTATAGTTCGTCAGTATAAGTCCTTAAAGAGACCTGAGACATGCTGGACCAGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR TCA 90 bp ATGAGGTGCAAATTAAGAGGTATCGAAGGTGCCTCATATAGTGCCTaGTGGATCTCTAGTCAATGTTGGTATTCTTTCCCTTTCTCTTTT +
Preference number: 1 (lower is better)
Translates to: MRCKLRGIEGASYSA*WISSQCWYSFPFSF
Trigger: AAAAGAGAAAGGGAAAGAATACCAACATTGACTAGAGATCCATCAGGCACTATATGAGGCACCTTCGATACCTCTTAATTTGCACCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR TCA 90 bp CCTTTGTTTTGTTTCAGTTCACCAAGTAGCCACCTTATTATAATTTaGCCCCTTGTAAATCTGTCTTCTGAGAGAGAATCTGCTGGTCAT +
Preference number: 1 (lower is better)
Translates to: PLFCFSSPSSHLIII*PLVNLSSERESAGH
Trigger: ATGACCAGCAGATTCTCTCTCAGAAGACAGATTTACAAGGGGTCAAATTATAATAAGGTGGCTACTTGGTGAACTGAAACAAAACAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR GCA 90 bp CTGTACCAACTATATGAATTGACTAACAAGAGACAGGTCTTATGGTaGAATAACAAAAAGCAGGGTTCTAAGTCAATAAGGCTAACAGTC +
Preference number: 1 (lower is better)
Translates to: LYQLYELTNKRQVLW*NNKKQGSKSIRLTV
Trigger: GACTGTTAGCCTTATTGACTTAGAACCCTGCTTTTTGTTATTGCACCATAAGACCTGTCTCTTGTTAGTCAATTCATATAGTTGGTACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CCA 90 bp TACCTGTACCAACTATATGAATTGACTAACAAGAGACAGGTCTTATaGTGCAATAACAAAAAGCAGGGTTCTAAGTCAATAAGGCTAACA +
Preference number: 1 (lower is better)
Translates to: YLYQLYELTNKRQVL*CNNKKQGSKSIRLT
Trigger: TGTTAGCCTTATTGACTTAGAACCCTGCTTTTTGTTATTGCACCATAAGACCTGTCTCTTGTTAGTCAATTCATATAGTTGGTACAGGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR TCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAACTGGCTAGCTGCCCATaGAGAGCTGCTTCCTTCCCT +
Preference number: 2 (lower is better)
Translates to: HATQQALSEGSLLLLSPKLASCP*RAASFP
Trigger: AGGGAAGGAAGCAGCTCTTCATGGGCAGCTAGCCAG...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CCA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTAGTACCTCTTCCCCCTaGCCCAGCGGCTGTCCTGGC +
Preference number: 2 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSSTSSP*PSGCPG
Trigger: GCCAGGACAGCCGCTGGGCCAGGGGGAAGAGGTACT...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR GCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGAATCCCTGCCCTTTaGCCACTTCCTTGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: HATQQALSEGSLLLLSPKRIPAL*PLPCPE
Trigger: TTCTGGACAAGGAAGTGGGCAAAGGGCAGGGATTCT...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR GCA 90 bp GGAGGATTATGGCTGCATAGGCAAACTGAGGCACGGCCACACCAGCATAGACCAACATCAGAAGACTTCTaGTCCTGTCGTCTGCAAGGG +
Preference number: 2 (lower is better)
Translates to: GGLWLHRQTEARPHQHRPTSEDF*SCRLQG
Trigger: CCCTTGCAGACGACAGGAGCAGAAGTCTTCTGATGT...TGGTCTATGCTGGTGTGGCCGTGCCTCAGTTTGCCTATGCAGCCATAATCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
3UTR-3UTR CCA 90 bp ACCAGCATAGACCAGAACCAGGGAGAGGAGTCGCAGCATCCACATCAGAAGACTACTGCATGCTCTCAGTaGGTAGTGCAGACTCCAGGA +
Preference number: 2 (lower is better)
Translates to: TSIDQNQGEESQHPHQKTTACSQ*VVQTPG
Trigger: TCCTGGAGTCTGCACTACCCACTGAGAGCATGCAGT...AGTCTTCTGATGTGGATGCTGCGACTCCTCTCCCTGGTTCTGGTCTATGCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
3UTR CAA 90 bp CCCAGCGGCTGTCCTGGCTGGGATGTACCTGGCAGCCCCAGCAGATaGTTCATGTGTTATTTACTCATACGCATACGTTGTAGCACACAA +
Preference number: 2 (lower is better)
Translates to: PSGCPGWDVPGSPSR*FMCYLLIRIRCSTQ
Trigger: TTGTGTGCTACAACGTATGCGTATGAGTAAATAACACATGAACAATCTGCTGGGGCTGCCAGGTACATCCCAGCCAGGACAGCCGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CCA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCTGGCTGGGATGTACCTaGCAGCCCCAGCAGATTGTT +
Preference number: 2 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFWLGCT*QPQQIV
Trigger: AACAATCTGCTGGGGCTGCCAGGTACATCCCAGCCA...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR GCA 90 bp CATATAACTGCATGCTCTCAGTGGGTAGTGCAGACTCCAGGAGGACATGAGGAGGAGGAGGATTATGGCTaGATAGGCAAACTGAGGCAC +
Preference number: 2 (lower is better)
Translates to: HITACSQWVVQTPGGHEEEEDYG*IGKLRH
Trigger: GTGCCTCAGTTTGCCTATGCAGCCATAATCCTCCTC...CTCCTCATGTCCTCCTGGAGTCTGCACTACCCACTGAGAGCATGCAGTTATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
3UTR-3UTR TCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAATTATTTAACCTCTCATaGGCTCAGTTCCACCACCAT +
Preference number: 2 (lower is better)
Translates to: HATQQALSEGSLLLLSPKLFNLS*AQFHHH
Trigger: ATGGTGGTGGAACTGAGCTCATGAGAGGTTAAATAA...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR TCA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCTACACCTATGGTGTGTaGGGCACAAAGCCAACTTCC +
Preference number: 2 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFYTYGV*GTKPTS
Trigger: GGAAGTTGGCTTTGTGCCTCACACACCATAGGTGTA...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAGTCCTTCATGTCAGATaGACATTCCCCTGTAATTCA +
Preference number: 2 (lower is better)
Translates to: HATQQALSEGSLLLLSPKVLHVR*TFPCNS
Trigger: TGAATTACAGGGGAATGTCCATCTGACATGAAGGAC...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR TCA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTCTTCCTTGTCCAGAATaGAGTCAACTTGAAGGTCGC +
Preference number: 2 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSLPCPE*SQLEGR
Trigger: GCGACCTTCAAGTTGACTTCATTCTGGACAAGGAAG...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR GCA 90 bp GGAGGATTATGGCTGCATAGGCAAACTGAGGCACGGCCACACCAGCATAGACCAGAAAAGAAAAACTCCTaGCACAAACACAAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: GGLWLHRQTEARPHQHRPEKKNS*HKHKEE
Trigger: CTCTTCCTTGTGTTTGTGGCAGGAGTTTTTCTTTTC...TGGTCTATGCTGGTGTGGCCGTGCCTCAGTTTGCCTATGCAGCCATAATCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444545.5
3UTR-3UTR GCA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTGATTTCTACCAGTGCTaGATCTCAGTGTGGTCTTGC +
Preference number: 2 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSDFYQC*ISVWSC
Trigger: GCAAGACCACACTGAGATGCAGCACTGGTAGAAATC...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAATGCTGCATCTCAGTGTaGTCTTGCACAAGTTATTTA +
Preference number: 2 (lower is better)
Translates to: HATQQALSEGSLLLLSPKCCISV*SCTSYL
Trigger: TAAATAACTTGTGCAAGACCACACTGAGATGCAGCA...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR GCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAATCTCAGTGTGGTCTTaGACAAGTTATTTAACCTCT +
Preference number: 2 (lower is better)
Translates to: HATQQALSEGSLLLLSPKISVWS*TSYLTS
Trigger: AGAGGTTAAATAACTTGTGCAAGACCACACTGAGAT...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CCA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTACAATTTCTCCCCTTTaGGAGATTCACAGTGCACAC +
Preference number: 2 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSTISPL*EIHSAH
Trigger: GTGTGCACTGTGAATCTCCCAAAGGGGAGAAATTGT...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR GCA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCTCAGGAAAGCAGCAGTaGCAAAATTCTGTCTATCCT +
Preference number: 2 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFSGKQQ*QNSVYP
Trigger: AGGATAGACAGAATTTTGGCACTGCTGCTTTCCTGA...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CCA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCGTACATCTCTCACTCTaGGAAACAATCACACATAGC +
Preference number: 2 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFVHLSL*ETITHS
Trigger: GCTATGTGTGATTGTTTCCCAGAGTGAGAGATGTAC...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR TCA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCAGAATACCTTTATTaGCCAACACTTGGTAGTAGC +
Preference number: 2 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSSEYLY*PTLGSS
Trigger: GCTACTACCAAGTGTTGGTCAATAAAGGTATTCTGA...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CCA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCGCTGTCACAGAATTTTaGTATCCACCTACAGTACAA +
Preference number: 2 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFAVTEF*YPPTVQ
Trigger: TTGTACTGTAGGTGGATACCAAAATTCTGTGACAGC...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CAA 90 bp CACAAAGCCAACTTCCAACCACCTGTGAAGGGCAGAGCCATTTTATaGAGTGGTCGTTTAAACTGTTCAAAGGCCTTTAAAAAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: HKANFQPPVKGRAIL*SGRLNCSKAFKKGG
Trigger: TCCTCCCTTTTTAAAGGCCTTTGAACAGTTTAAACGACCACTCAATAAAATGGCTCTGCCCTTCACAGGTGGTTGGAAGTTGGCTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CCA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCAAGTTATCTTCAAAATaGGTTGGTTTCCCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFKLSSK*VGFPFQ
Trigger: CTGGAAAGGGAAACCAACCCATTTTGAAGATAACTT...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CCA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCAGCCCTAGGTATTACTaGCAAACCATACAACTAATT +
Preference number: 2 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFSPRYY*QTIQLI
Trigger: AATTAGTTGTATGGTTTGCCAGTAATACCTAGGGCT...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR GCA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACCACAGCAAATGTTTTTaGCACCGTTCACTAGAACAG +
Preference number: 2 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYHSKCF*HRSLEQ
Trigger: CTGTTCTAGTGAACGGTGGCAAAAACATTTGCTGTG...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CCA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATTGTGATGGTTACACCTaGCTAGCTGCCCATGAAGAG +
Preference number: 2 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHCDGYT*LAAHEE
Trigger: CTCTTCATGGGCAGCTAGCCAGGTGTAACCATCACA...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CCA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCGAGGGAAACATTTCTTaGAAGAGTTATCTGTACATT +
Preference number: 2 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFEGNIS*KSYLYI
Trigger: AATGTACAGATAACTCTTCCAAGAAATGTTTCCCTC...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CAA 90 bp ATAAAGGAAGTAGAATATGAGCCCTGGAAGCAGACATATGGGGGCTaGAATTCTGATTCTACCACTTTAGCTATATGTGTCCTTCAGCAA +
Preference number: 2 (lower is better)
Translates to: IKEVEYEPWKQTYGG*NSDSTTLAICVLQQ
Trigger: TTGCTGAAGGACACATATAGCTAAAGTGGTAGAATCAGAATTCAAGCCCCCATATGTCTGCTTCCAGGGCTCATATTCTACTTCCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR TCA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATTGGGGGCTTGAATTCTaGTTCTACCACTTTAGCTAT +
Preference number: 2 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHWGLEF*FYHFSY
Trigger: ATAGCTAAAGTGGTAGAATCAGAATTCAAGCCCCCA...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR GCA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACTCACTAGAACAGTTCTaGCTAACTTTAATAGAATCC +
Preference number: 2 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYSLEQF*LTLIES
Trigger: GGATTCTATTAAAGTTAGGCAGAACTGTTCTAGTGA...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CAA 90 bp AAGAAAGGAGGGAAACATTTCTTGGAAGAGTTATCTGTACATTGCTaGATGGGGATTAGAATTGTGATCAGTACTATAATACACCCCCAA +
Preference number: 2 (lower is better)
Translates to: KKGGKHFLEELSVHC*MGIRIVISTIIHPQ
Trigger: TTGGGGGTGTATTATAGTACTGATCACAATTCTAATCCCCATCAAGCAATGTACAGATAACTCTTCCAAGAAATGTTTCCCTCCTTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CAA 90 bp TCTCTGTCTTCCTGCAGGTGTCTTCAAACTTCCACATCCATTATGTaGTCTATCTTGCTTTCAGTTGGACAAGAAAAGCTAATTTATAAA +
Preference number: 2 (lower is better)
Translates to: SLSSCRCLQTSTSIM*SILLSVGQEKLIYK
Trigger: TTTATAAATTAGCTTTTCTTGTCCAACTGAAAGCAAGATAGACAACATAATGGATGTGGAAGTTTGAAGACACCTGCAGGAAGACAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CCA 72 bp GAGCTGCTTCCTTCCCTCAGCAGTACCTCTTCCCCCTaGCCCAGCGGCTGTCCTGGCTGGGATGTACCTGGC +
Preference number: 3 (lower is better)
Translates to: ELLPSLSSTSSP*PSGCPGWDVPG
Trigger: GCCAGGTACATCCCAGCCAGGACAGCCGCTGGGCCAGGGGGAAGAGGTACTGCTGAGGGAAGGAAGCAGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CCA 72 bp CCCCTGGCCCAGCGGCTGTCCTGGCTGGGATGTACCTaGCAGCCCCAGCAGATTGTTCATGTGTTATTTACT +
Preference number: 3 (lower is better)
Translates to: PLAQRLSWLGCT*QPQQIVHVLFT
Trigger: AGTAAATAACACATGAACAATCTGCTGGGGCTGCCAGGTACATCCCAGCCAGGACAGCCGCTGGGCCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR GCA 72 bp GGGAGAGGAGTCGCAGCATCCACATCAGAAGACTTCTaGTCCTGTCGTCTGCAAGGGGCCCATGCTTGTAAC +
Preference number: 3 (lower is better)
Translates to: GRGVAASTSEDF*SCRLQGAHACN
Trigger: GTTACAAGCATGGGCCCCTTGCAGACGACAGGAGCAGAAGTCTTCTGATGTGGATGCTGCGACTCCTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
3UTR TCA 72 bp AAACTGGTCCATCACCCCAGACAGTCTGAGAAGCACTaGCAAGAGCCGCAGACTACAGTGTCCATTGCTGCG +
Preference number: 3 (lower is better)
Translates to: KLVHHPRQSEKH*QEPQTTVSIAA
Trigger: CGCAGCAATGGACACTGTAGTCTGCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CCA 72 bp GCCACCAACATTGTGAGGCCCATGGCTGTAGGGAGATaGCTCCTAAGCTTGCACCTGAAGATCTTGTCTACC +
Preference number: 3 (lower is better)
Translates to: ATNIVRPMAVGR*LLSLHLKILST
Trigger: GGTAGACAAGATCTTCAGGTGCAAGCTTAGGAGCCATCTCCCTACAGCCATGGGCCTCACAATGTTGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR TCA 72 bp ATGCTCTCAGTGGGTAGTGCAGACTCCAGGAGGACATaGGGAGGATTATGGCTGCATAGGCAAACTGAGGCA +
Preference number: 3 (lower is better)
Translates to: MLSVGSADSRRT*GGLWLHRQTEA
Trigger: TGCCTCAGTTTGCCTATGCAGCCATAATCCTCCTCATGTCCTCCTGGAGTCTGCACTACCCACTGAGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
3UTR GCA 72 bp GTCATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTaGTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTT +
Preference number: 3 (lower is better)
Translates to: VMPPSRLSQKAA*SCCHLKVPLCL
Trigger: AAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR GCA 72 bp AACAGTCACACCCAAATAGTTCACTCTTCAATGTCATaGCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCT +
Preference number: 3 (lower is better)
Translates to: NSHTQIVHSSMS*HPAGSLRRQLA
Trigger: AGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATGACATTGAAGAGTGAACTATTTGGGTGTGACTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR GCA 72 bp GCACTGACAAGAGCCGCAGACTACAGTGTCCATTGCTaGGGGGCACAAATGACTGGTATGTGTATAACATCA +
Preference number: 3 (lower is better)
Translates to: ALTRAADYSVHC*GAQMTGMCITS
Trigger: TGATGTTATACACATACCAGTCATTTGTGCCCCGCAGCAATGGACACTGTAGTCTGCGGCTCTTGTCAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR GCA 72 bp GAAGCACTGACAAGAGCCGCAGACTACAGTGTCCATTaGTGCGGGGCACAAATGACTGGTATGTGTATAACA +
Preference number: 3 (lower is better)
Translates to: EALTRAADYSVH*CGAQMTGMCIT
Trigger: TGTTATACACATACCAGTCATTTGTGCCCCGCAGCAATGGACACTGTAGTCTGCGGCTCTTGTCAGTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR GCA 72 bp CAGCATCCACATCAGAAGACTTCTGCTCCTGTCGTCTaGAAGGGGCCCATGCTTGTAACAAACAACAAAGCT +
Preference number: 3 (lower is better)
Translates to: QHPHQKTSAPVV*KGPMLVTNNKA
Trigger: AGCTTTGTTGTTTGTTACAAGCATGGGCCCCTTGCAGACGACAGGAGCAGAAGTCTTCTGATGTGGATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
3UTR CCA 72 bp CACAGGTTCAGGGGATTAAGACCAGATTTAGTGCCCTaGTGTCGACAAAGCACCTGTTCATGCTTACTAGCC +
Preference number: 3 (lower is better)
Translates to: HRFRGLRPDLVP*CRQSTCSCLLA
Trigger: GGCTAGTAAGCATGAACAGGTGCTTTGTCGACACCAGGGCACTAAATCTGGTCTTAATCCCCTGAACCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CCA 72 bp TCTCTCTTTGGCTGTTTTTACTGTGATGGTTACACCTaGCTAGCTGCCCATGAAGAGCTGCTTCCTTCCCTC +
Preference number: 3 (lower is better)
Translates to: SLFGCFYCDGYT*LAAHEELLPSL
Trigger: GAGGGAAGGAAGCAGCTCTTCATGGGCAGCTAGCCAGGTGTAACCATCACAGTAAAAACAGCCAAAGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CCA 72 bp CTGCATAAAGGAAGGCGTGGTCTTTGTCAACAGACCTaGTATCTCATCCCATTAACAAGGCTAGCCCCACTG +
Preference number: 3 (lower is better)
Translates to: LHKGRRGLCQQT*YLIPLTRLAPL
Trigger: CAGTGGGGCTAGCCTTGTTAATGGGATGAGATACCAGGTCTGTTGACAAAGACCACGCCTTCCTTTATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CAA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCAGATGGCTCCTAAGCTaGCACCTGAAGATCTTGTCT +
Preference number: 3 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFRWLLS*HLKILS
Trigger: AGACAAGATCTTCAGGTGCAAGCTTAGGAGCCATCT...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR GCA 72 bp AACAGCAGTCACAGAGAGGAAAAAGTTGGCAGGACCTaGATAAAGGAAGGCGTGGTCTTTGTCAACAGACCT +
Preference number: 3 (lower is better)
Translates to: NSSHREEKVGRT*IKEGVVFVNRP
Trigger: AGGTCTGTTGACAAAGACCACGCCTTCCTTTATGCAGGTCCTGCCAACTTTTTCCTCTCTGTGACTGCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CAA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTCCACAGCAAATGTTTTaGCCACCGTTCACTAGAACA +
Preference number: 3 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSPQQMF*PPFTRT
Trigger: TGTTCTAGTGAACGGTGGCAAAAACATTTGCTGTGG...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CAA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCCCTTTCCAGACTGACTaGTTTTTCTCCACAGCAAAT +
Preference number: 3 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFPFQTD*FFSTAN
Trigger: ATTTGCTGTGGAGAAAAACAAGTCAGTCTGGAAAGG...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CAA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTACTATAGGAAGAGTATaGCAGAGTCTTCTGACACAG +
Preference number: 3 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSTIGRV*QSLLTQ
Trigger: CTGTGTCAGAAGACTCTGCAATACTCTTCCTATAGT...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CAA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTGGCAGAGCCATTTTATaGAGTGGTCGTTTAAACTGT +
Preference number: 3 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSGRAIL*SGRLNC
Trigger: ACAGTTTAAACGACCACTCAATAAAATGGCTCTGCC...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CCA 72 bp TCAGGGCTGGATTTCTACCAGTGCTGCATCTCAGTGTaGTCTTGCACAAGTTATTTAACCTCTCATGAGCTC +
Preference number: 3 (lower is better)
Translates to: SGLDFYQCCISV*SCTSYLTSHEL
Trigger: GAGCTCATGAGAGGTTAAATAACTTGTGCAAGACCACACTGAGATGCAGCACTGGTAGAAATCCAGCCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CCA 72 bp GATCTTGTCTACCTGAGTCAAAGGATACATCAGGGCTaGATTTCTACCAGTGCTGCATCTCAGTGTGGTCTT +
Preference number: 3 (lower is better)
Translates to: DLVYLSQRIHQG*ISTSAASQCGL
Trigger: AAGACCACACTGAGATGCAGCACTGGTAGAAATCCAGCCCTGATGTATCCTTTGACTCAGGTAGACAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CCA 72 bp AGACTACAGTGTCCATTGCTGCGGGGCACAAATGACTaGTATGTGTATAACATCAGCAGATGTAGTCACCTC +
Preference number: 3 (lower is better)
Translates to: RLQCPLLRGTND*YVYNISRCSHL
Trigger: GAGGTGACTACATCTGCTGATGTTATACACATACCAGTCATTTGTGCCCCGCAGCAATGGACACTGTAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CAA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTTATCTGTACATTGCTaGATGGGGATTAGAATTGTG +
Preference number: 3 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSLSVHC*MGIRIV
Trigger: CACAATTCTAATCCCCATCAAGCAATGTACAGATAA...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CAA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCACATCCATTATGTaGTCTATCTTGCTTTCAGTT +
Preference number: 3 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSSTSIM*SILLSV
Trigger: AACTGAAAGCAAGATAGACAACATAATGGATGTGGA...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR GCA 72 bp AGCAAATGTTTTTGCCACCGTTCACTAGAACAGTTCTaGCTAACTTTAATAGAATCCCTGCCCTTTGCCCAC +
Preference number: 3 (lower is better)
Translates to: SKCFCHRSLEQF*LTLIESLPFAH
Trigger: GTGGGCAAAGGGCAGGGATTCTATTAAAGTTAGGCAGAACTGTTCTAGTGAACGGTGGCAAAAACATTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR GCA 72 bp TCAAAGGATACATCAGGGCTGGATTTCTACCAGTGCTaGATCTCAGTGTGGTCTTGCACAAGTTATTTAACC +
Preference number: 3 (lower is better)
Translates to: SKDTSGLDFYQC*ISVWSCTSYLT
Trigger: GGTTAAATAACTTGTGCAAGACCACACTGAGATGCAGCACTGGTAGAAATCCAGCCCTGATGTATCCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR GCA 72 bp CTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTaGAGGTGTCTTCAAACTTCCACATCCATTATGTTG +
Preference number: 3 (lower is better)
Translates to: LLLSPKSTSLSS*RCLQTSTSIML
Trigger: CAACATAATGGATGTGGAAGTTTGAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CCA 72 bp TTAAGCAAGAAACTGCAGCACACAATTTCTCCCCTTTaGGAGATTCACAGTGCACACGAGCATTATGAATGC +
Preference number: 3 (lower is better)
Translates to: LSKKLQHTISPL*EIHSAHEHYEC
Trigger: GCATTCATAATGCTCGTGTGCACTGTGAATCTCCCAAAGGGGAGAAATTGTGTGCTGCAGTTTCTTGCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CCA 72 bp TACAAAAGTATTACTAGTGATGAACTAGAGGGAAACTaGTCCATCACCCCAGACAGTCTGAGAAGCACTGAC +
Preference number: 3 (lower is better)
Translates to: YKSITSDELEGN*SITPDSLRSTD
Trigger: GTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCAGTTTCCCTCTAGTTCATCACTAGTAATACTTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR TCA 72 bp GTCCAGCATGTCTCAGGTCTCTTTAAGGACTTATACTaGCGAACTATAGGAAGAGTATTGCAGAGTCTTCTG +
Preference number: 3 (lower is better)
Translates to: VQHVSGLFKDLY*RTIGRVLQSLL
Trigger: CAGAAGACTCTGCAATACTCTTCCTATAGTTCGTCAGTATAAGTCCTTAAAGAGACCTGAGACATGCTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR TCA 72 bp GTAGCACACAAACTGCTTCTTAGGAGACGAACTTGGTaGGCACAGGCACTGATACATCTGATACATTTATAT +
Preference number: 3 (lower is better)
Translates to: VAHKLLLRRRTW*AQALIHLIHLY
Trigger: ATATAAATGTATCAGATGTATCAGTGCCTGTGCTCACCAAGTTCGTCTCCTAAGAAGCAGTTTGTGTGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR TCA 72 bp GGTATGTGTATAACATCAGCAGATGTAGTCACCTCTTaGATGCCTTATCCATGGGGTCATTTCCTTCACTTT +
Preference number: 3 (lower is better)
Translates to: GMCITSADVVTS*MPYPWGHFLHF
Trigger: AAAGTGAAGGAAATGACCCCATGGATAAGGCATTCAAGAGGTGACTACATCTGCTGATGTTATACACATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CAA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATGGCTGTCACAGAATTTaGGTATCCACCTACAGTACA +
Preference number: 3 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNGCHRI*VSTYST
Trigger: TGTACTGTAGGTGGATACCAAAATTCTGTGACAGCC...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CAA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATCATCTCAGTGTGGTCTaGCACAAGTTATTTAACCTC +
Preference number: 3 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHHLSVV*HKLFNL
Trigger: GAGGTTAAATAACTTGTGCAAGACCACACTGAGATG...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CAA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATAACCCTGAGATTGTCTaGCCATGTTCAAATCTTTCC +
Preference number: 3 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHNPEIV*PCSNLS
Trigger: GGAAAGATTTGAACATGGCAAGACAATCTCAGGGTT...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR TCA 72 bp AAATTAAGAGGTATCGAAGGTGCCTCATATAGTGCCTaGTGGATCTCTAGTCAATGTTGGTATTCTTTCCCT +
Preference number: 3 (lower is better)
Translates to: KLRGIEGASYSA*WISSQCWYSFP
Trigger: AGGGAAAGAATACCAACATTGACTAGAGATCCATCAGGCACTATATGAGGCACCTTCGATACCTCTTAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CAA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATTATCTTCAAAATGGGTaGGTTTCCCTTTCCAGACTG +
Preference number: 3 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNYLQNG*VSLSRL
Trigger: CAGTCTGGAAAGGGAAACCAACCCATTTTGAAGATA...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CAA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATATCTTAACCCTGAGATaGTCTTGCCATGTTCAAATC +
Preference number: 3 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHILTLR*SCHVQI
Trigger: GATTTGAACATGGCAAGACAATCTCAGGGTTAAGAT...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR-3UTR CAA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATGTTGTTCTTCTCTCTTaGGCTGTTTTTACTGTGATG +
Preference number: 3 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHVVLLS*AVFTVM
Trigger: CATCACAGTAAAAACAGCCAAAGAGAGAAGAACAAC...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR GCA 72 bp GAAAATACCAAAACATATCACAGAGTGGTCATGAGGTaGAAATTAAGAGGTATCGAAGGTGCCTCATATAGT +
Preference number: 3 (lower is better)
Translates to: ENTKTYHRVVMR*KLRGIEGASYS
Trigger: ACTATATGAGGCACCTTCGATACCTCTTAATTTGCACCTCATGACCACTCTGTGATATGTTTTGGTATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR GCA 72 bp CTATATGAATTGACTAACAAGAGACAGGTCTTATGGTaGAATAACAAAAAGCAGGGTTCTAAGTCAATAAGG +
Preference number: 3 (lower is better)
Translates to: LYELTNKRQVLW*NNKKQGSKSIR
Trigger: CCTTATTGACTTAGAACCCTGCTTTTTGTTATTGCACCATAAGACCTGTCTCTTGTTAGTCAATTCATATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCCGCGCACGGGCAGTGTaGCCAGGGGCGGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFRARAV*PGAAAR
Trigger: TCTGGCTGCCGCCCCTGGCCACACTGCCCGTGCGCG...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTTCCCCCTaGCCCAGCGGCTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: HATQQALSEGSLLLLSPKSTSSP*PSGCPG
Trigger: GCCAGGACAGCCGCTGGGCCAGGGGGAAGAGGTACT...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAGGAGACGACCAGCCATaGGGGAAAGTCGGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: HATQQALSEGSLLLLSPKGDDQP*GKVGFS
Trigger: CGAAAACCCGACTTTCCCTCATGGCTGGTCGTCTCC...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp CCAGAACCAGGGAGAGGAGTCGCAGCATCCACATCAGAAGACTTCTGCTCCTGTTCTGCTCCTGTCGTCTaGAAGGGGCCCATGCTTGTA +
Preference number: 4 (lower is better)
Translates to: PEPGRGVAASTSEDFCSCSAPVV*KGPMLV
Trigger: TACAAGCATGGGCCCCTTGCAGACGACAGGAGCAGA...ACAGGAGCAGAAGTCTTCTGATGTGGATGCTGCGACTCCTCTCCCTGGTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
CDS-3UTR CCA 90 bp AGTCGCAGCATCCACATCAGAAGACTTCTGCTCCTGTCGTCTGCAAGGGGCCCAGAACTGCCGCTCACGTaGGACCGTTATGTTTACTCG +
Preference number: 4 (lower is better)
Translates to: SRSIHIRRLLLLSSARGPELPLT*DRYVYS
Trigger: CGAGTAAACATAACGGTCCCACGTGAGCGGCAGTTC...TGGGCCCCTTGCAGACGACAGGAGCAGAAGTCTTCTGATGTGGATGCTGCGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414176.5
CDS-3UTR TCA 90 bp AGAACCAGGGAGAGGAGTCGCAGCATCCACATCAGAAGACTTCTGCTCCTGTCGGACTCCAGGAGGACATaGGGAGGATTATGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: RTRERSRSIHIRRLLLLSDSRRT*GGLWLH
Trigger: ATGCAGCCATAATCCTCCTCATGTCCTCCTGGAGTC...CGACAGGAGCAGAAGTCTTCTGATGTGGATGCTGCGACTCCTCTCCCTGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
CDS-3UTR GCA 90 bp GGAGGACATGAGGAGGATTATGGCTGCATAGGCAAACTGAGGCACGGCCACACCACATCAGAAGACTTCTaGTCCTGTCGTCTGCAAGGG +
Preference number: 4 (lower is better)
Translates to: GGHEEDYGCIGKLRHGHTTSEDF*SCRLQG
Trigger: CCCTTGCAGACGACAGGAGCAGAAGTCTTCTGATGT...GGTGTGGCCGTGCCTCAGTTTGCCTATGCAGCCATAATCCTCCTCATGTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
CDS-3UTR GCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAACTGCCCATGAAGAGCTaGTTCCTTCCCTCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: HATQQALSEGSLLLLSPKLPMKS*FLPSAV
Trigger: TACTGCTGAGGGAAGGAAGCAGCTCTTCATGGGCAG...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp AACTCCTGCCACAAACACAAGGAAGAGTTTGAAATCCATGATGTTTCGATTCACCGCGCACGGGCAGTGTaGCCAGGGGCGGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: NSCHKHKEEFEIHDVSIHRARAV*PGAAAR
Trigger: TCTGGCTGCCGCCCCTGGCCACACTGCCCGTGCGCG...GTGAATCGAAACATCATGGATTTCAAACTCTTCCTTGTGTTTGTGGCAGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343105.9
CDS-3UTR CCA 90 bp AGACCAGAACCAGGGAGAGGAGTCGCAGCATCCACATCAGAAGACTTCTGCTCCACTGCATGCTCTCAGTaGGTAGTGCAGACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RPEPGRGVAASTSEDFCSTACSQ*VVQTPG
Trigger: TCCTGGAGTCTGCACTACCCACTGAGAGCATGCAGT...GGAGCAGAAGTCTTCTGATGTGGATGCTGCGACTCCTCTCCCTGGTTCTGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
CDS-3UTR GCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAACATCAGAAGACTTCTaGTCCTGTCGTCTGCAAGGG +
Preference number: 4 (lower is better)
Translates to: HATQQALSEGSLLLLSPKTSEDF*SCRLQG
Trigger: CCCTTGCAGACGACAGGAGCAGAAGTCTTCTGATGT...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAGAGGAGGATTATGGCTaGATAGGCAAACTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: HATQQALSEGSLLLLSPKEEDYG*IGKLRH
Trigger: GTGCCTCAGTTTGCCTATGCAGCCATAATCCTCCTC...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp AGACCAGAACCAGGGAGAGGAGTCGCAGCATCCACATCAGAAGACTTCTGCTCCGAGGAGGATTATGGCTaGATAGGCAAACTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: RPEPGRGVAASTSEDFCSEEDYG*IGKLRH
Trigger: GTGCCTCAGTTTGCCTATGCAGCCATAATCCTCCTC...GGAGCAGAAGTCTTCTGATGTGGATGCTGCGACTCCTCTCCCTGGTTCTGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
CDS-3UTR GCA 90 bp CCAGGGAGAGGAGTCGCAGCATCCACATCAGAAGACTTCTGCTCCTGTCGTCTGCCTCATATAACTGCATaGTCTCAGTGGGTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: PGRGVAASTSEDFCSCRLPHITA*SQWVVQ
Trigger: CTGCACTACCCACTGAGAGCATGCAGTTATATGAGG...CAGACGACAGGAGCAGAAGTCTTCTGATGTGGATGCTGCGACTCCTCTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
CDS-3UTR GCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAATACAGTGTCCATTGCTaGGGGGCACAAATGACTGGT +
Preference number: 4 (lower is better)
Translates to: HATQQALSEGSLLLLSPKYSVHC*GAQMTG
Trigger: ACCAGTCATTTGTGCCCCGCAGCAATGGACACTGTA...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp GGATTATGGCTGCATAGGCAAACTGAGGCACGGCCACACCAGCATAGACCAGAAACTGCATGCTCTCAGTaGGTAGTGCAGACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GLWLHRQTEARPHQHRPETACSQ*VVQTPG
Trigger: TCCTGGAGTCTGCACTACCCACTGAGAGCATGCAGT...TTCTGGTCTATGCTGGTGTGGCCGTGCCTCAGTTTGCCTATGCAGCCATAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
CDS-3UTR CCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAATTTGCTAGGAGTGTaGAGTCTGGAGACGACCAGC +
Preference number: 4 (lower is better)
Translates to: HATQQALSEGSLLLLSPKNLLGV*SLETTS
Trigger: GCTGGTCGTCTCCAGACTCCACACTCCTAGCAAATT...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAGTAGAATATGAGCCCTaGAAGCAGACATATGGGGGC +
Preference number: 4 (lower is better)
Translates to: HATQQALSEGSLLLLSPKVEYEP*KQTYGG
Trigger: GCCCCCATATGTCTGCTTCCAGGGCTCATATTCTAC...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp ACCAGCATAGACCAGAACCAGGGAGAGGAGTCGCAGCATCCACATCAGAAGACTACATCAGAAGACTTCTaGTCCTGTCGTCTGCAAGGG +
Preference number: 4 (lower is better)
Translates to: TSIDQNQGEESQHPHQKTTSEDF*SCRLQG
Trigger: CCCTTGCAGACGACAGGAGCAGAAGTCTTCTGATGT...AGTCTTCTGATGTGGATGCTGCGACTCCTCTCCCTGGTTCTGGTCTATGCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
CDS-3UTR GCA 90 bp CCACACCAGCATAGACCAGAACCAGGGAGAGGAGTCGCAGCATCCACATCAGAACCTCATATAACTGCATaGTCTCAGTGGGTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: PHQHRPEPGRGVAASTSEPHITA*SQWVVQ
Trigger: CTGCACTACCCACTGAGAGCATGCAGTTATATGAGG...TTCTGATGTGGATGCTGCGACTCCTCTCCCTGGTTCTGGTCTATGCTGGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
CDS-3UTR GCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAGATTTCTACCAGTGCTaGATCTCAGTGTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: HATQQALSEGSLLLLSPKDFYQC*ISVWSC
Trigger: GCAAGACCACACTGAGATGCAGCACTGGTAGAAATC...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp TATGGCTGCATAGGCAAACTGAGGCACGGCCACACCAGCATAGACCAGAACCAGGTCTCCCTGCATAGTTaGCCATATGTATTTCCACTC +
Preference number: 4 (lower is better)
Translates to: YGCIGKLRHGHTSIDQNQVSLHS*PYVFPL
Trigger: GAGTGGAAATACATATGGTCAACTATGCAGGGAGAC...CTGGTTCTGGTCTATGCTGGTGTGGCCGTGCCTCAGTTTGCCTATGCAGCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444545.5
CDS-3UTR GCA 90 bp CATCAGAAGACTTCTGCTCCTGTCGTCTGCAAGGGGCCCATGCTTGTAACAAACGAGGAGGATTATGGCTaGATAGGCAAACTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: HQKTSAPVVCKGPMLVTNEEDYG*IGKLRH
Trigger: GTGCCTCAGTTTGCCTATGCAGCCATAATCCTCCTC...GTTTGTTACAAGCATGGGCCCCTTGCAGACGACAGGAGCAGAAGTCTTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
CDS-3UTR GCA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTCTCGGGTTAAAGAGCTaGTCTTCCAAGAAGGCACCC +
Preference number: 4 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSLGLKS*SSKKAP
Trigger: GGGTGCCTTCTTGGAAGAGCAGCTCTTTAACCCGAG...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAATCTTCAGGTGACAAGTaGCTTCCTCCAAGAACAAAG +
Preference number: 4 (lower is better)
Translates to: HATQQALSEGSLLLLSPKSSGDK*LPPRTK
Trigger: CTTTGTTCTTGGAGGAAGCCACTTGTCACCTGAAGA...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAACAATTTCTCCCCTTTaGGAGATTCACAGTGCACAC +
Preference number: 4 (lower is better)
Translates to: HATQQALSEGSLLLLSPKTISPL*EIHSAH
Trigger: GTGTGCACTGTGAATCTCCCAAAGGGGAGAAATTGT...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTAGGAGACGAACTTGGTaGGCACAGGCACTGATACAT +
Preference number: 4 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSRRRTW*AQALIH
Trigger: ATGTATCAGTGCCTGTGCTCACCAAGTTCGTCTCCT...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACCTGGCTAGCTGCCCATaGAGAGCTGCTTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYLASCP*RAASFP
Trigger: AGGGAAGGAAGCAGCTCTTCATGGGCAGCTAGCCAG...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp GGAGGATTATGGCTGCATAGGCAAACTGAGGCACGGCCACACCAGCATAGACCAAGCACACAGTCTCCCTaGATAGTTGACCATATGTAT +
Preference number: 4 (lower is better)
Translates to: GGLWLHRQTEARPHQHRPSTQSP*IVDHMY
Trigger: ATACATATGGTCAACTATGCAGGGAGACTGTGTGCT...TGGTCTATGCTGGTGTGGCCGTGCCTCAGTTTGCCTATGCAGCCATAATCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444545.5
CDS-3UTR GCA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCCCCCCAAGGCCATACTaGTCTTCATGCAGACTGATT +
Preference number: 4 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFPPRPY*SSCRLI
Trigger: AATCAGTCTGCATGAAGAGCAGTATGGCCTTGGGGG...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAACACAGCAAATGTTTTTaGCACCGTTCACTAGAACAG +
Preference number: 4 (lower is better)
Translates to: HATQQALSEGSLLLLSPKHSKCF*HRSLEQ
Trigger: CTGTTCTAGTGAACGGTGGCAAAAACATTTGCTGTG...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCAAAGTTGGCAGGACCTaGATAAAGGAAGGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFKVGRT*IKEGVV
Trigger: GACCACGCCTTCCTTTATGCAGGTCCTGCCAACTTT...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATGCCCAGCGGCTGTCCTaGCTGGGATGTACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHAQRLS*LGCTWQ
Trigger: CTGCCAGGTACATCCCAGCCAGGACAGCCGCTGGGC...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAGTACATCTCTCACTCTaGGAAACAATCACACATAGC +
Preference number: 4 (lower is better)
Translates to: HATQQALSEGSLLLLSPKVHLSL*ETITHS
Trigger: GCTATGTGTGATTGTTTCCCAGAGTGAGAGATGTAC...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CAA 72 bp AGAAGCACTGACAAGAGCCGCAGACTACAGTGTCCATaGCTGCGGGGCACAAATGACTGGTATGTGTATAAC +
Preference number: 4 (lower is better)
Translates to: RSTDKSRRLQCP*LRGTNDWYVYN
Trigger: GTTATACACATACCAGTCATTTGTGCCCCGCAGCAATGGACACTGTAGTCTGCGGCTCTTGTCAGTGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp AGACCAGAACCAGGGAGAGGAGTCGCAGCATCCACATCAGAAGACTTCTGCTCCAAATCAAAACCTCTCTaGGTTTCGGTTGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: RPEPGRGVAASTSEDFCSKSKPL*VSVASV
Trigger: TACAGAAGCAACCGAAACTCAGAGAGGTTTTGATTT...GGAGCAGAAGTCTTCTGATGTGGATGCTGCGACTCCTCTCCCTGGTTCTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414176.5
CDS-3UTR TCA 90 bp CAGCATAGACCAGAACCAGGGAGAGGAGTCGCAGCATCCACATCAGAAGACTTCGATTTCAACACGCATTaGTGTACTGTACAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: QHRPEPGRGVAASTSEDFDFNTH*CTVQKA
Trigger: GGCCTTTTGTACAGTACATCAATGCGTGTTGAAATC...GAAGTCTTCTGATGTGGATGCTGCGACTCCTCTCCCTGGTTCTGGTCTATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414176.5
CDS-3UTR TCA 90 bp ACTTCTGCTCCTGTCGTCTGCAAGGGGCCCATGCTTGTAACAAACAACAAAGCTCACCACCAGCTCTTTTaGTGTAAACCACTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: TSAPVVCKGPMLVTNNKAHHQLF*CKPLLH
Trigger: ATGGAGCAGTGGTTTACATCAAAAGAGCTGGTGGTG...AGCTTTGTTGTTTGTTACAAGCATGGGCCCCTTGCAGACGACAGGAGCAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414176.5
CDS-3UTR TCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAATGCTATACTTCGGAATaGATCTTTTCACCAACAGCA +
Preference number: 4 (lower is better)
Translates to: HATQQALSEGSLLLLSPKCYTSE*IFSPTA
Trigger: TGCTGTTGGTGAAAAGATTCATTCCGAAGTATAGCA...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTGGCTGTTTTTACTGTaGTGGTTACACCTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSWLFLL*WLHLAS
Trigger: GCTAGCCAGGTGTAACCATCACAGTAAAAACAGCCA...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCGATGTAGTCACCTCTTaGATGCCTTATCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFDVVTS*MPYPWG
Trigger: ACCCCATGGATAAGGCATTCAAGAGGTGACTACATC...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp CATATAACTGCATGCTCTCAGTGGGTAGTGCAGACTCCAGGAGGACATGAGGAGTCCACCTCATATAACTaGATGCTCTCAGTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: HITACSQWVVQTPGGHEESTSYN*MLSVGS
Trigger: ACTACCCACTGAGAGCATGCAGTTATATGAGGTGGA...CTCCTCATGTCCTCCTGGAGTCTGCACTACCCACTGAGAGCATGCAGTTATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414176.5
CDS-3UTR CCA 90 bp ATCTTTTCACCAACAGCAAGACAAAGACTAATGTCATTAGAACACCTAGCACAGAGCCACCACCGCCCTTaGCGCGGCCCCATTTCGTTA +
Preference number: 4 (lower is better)
Translates to: IFSPTARQRLMSLEHLAQSHHRP*RGPISL
Trigger: TAACGAAATGGGGCCGCGCCAAGGGCGGTGGTGGCT...CTGTGCTAGGTGTTCTAATGACATTAGTCTTTGTCTTGCTGTTGGTGAAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343105.9
CDS-3UTR CCA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAGCTGTCACAGAATTTTaGTATCCACCTACAGTACAA +
Preference number: 4 (lower is better)
Translates to: HATQQALSEGSLLLLSPKAVTEF*YPPTVQ
Trigger: TTGTACTGTAGGTGGATACCAAAATTCTGTGACAGC...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACTGGCTGGGATGTACCTaGCAGCCCCAGCAGATTGTT +
Preference number: 4 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYWLGCT*QPQQIV
Trigger: AACAATCTGCTGGGGCTGCCAGGTACATCCCAGCCA...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CAA 72 bp TGTCCTGGCTGGGATGTACCTGGCAGCCCCAGCAGATaGTTCATGTGTTATTTACTCATACGCATACGTTGT +
Preference number: 4 (lower is better)
Translates to: CPGWDVPGSPSR*FMCYLLIRIRC
Trigger: ACAACGTATGCGTATGAGTAAATAACACATGAACAATCTGCTGGGGCTGCCAGGTACATCCCAGCCAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACGACTCCAGGAGGACATaGGGAGGATTATGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYDSRRT*GGLWLH
Trigger: ATGCAGCCATAATCCTCCTCATGTCCTCCTGGAGTC...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATAGCCACCACCGCCCTTaGCGCGGCCCCATTTCGTTA +
Preference number: 4 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNSHHRP*RGPISL
Trigger: TAACGAAATGGGGCCGCGCCAAGGGCGGTGGTGGCT...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp CAGAAGACTTCTGCTCCTGTCGTCTGCAAGGGGCCCATGCTTGTAACAAACAACAATTCTGAACAGGCCTaGACTGGTAATTTTCACCTG +
Preference number: 4 (lower is better)
Translates to: QKTSAPVVCKGPMLVTNNNSEQA*TGNFHL
Trigger: CAGGTGAAAATTACCAGTCCAGGCCTGTTCAGAATT...GTTGTTTGTTACAAGCATGGGCCCCTTGCAGACGACAGGAGCAGAAGTCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414176.5
CDS-3UTR CCA 90 bp GAGGAGGATTATGGCTGCATAGGCAAACTGAGGCACGGCCACACCAGCATAGACCACAGTCTCCCTGTATaGATTGATGATTATGGTTAT +
Preference number: 4 (lower is better)
Translates to: EEDYGCIGKLRHGHTSIDHSLPV*IDDYGY
Trigger: ATAACCATAATCATCAATCCATACAGGGAGACTGTG...GTCTATGCTGGTGTGGCCGTGCCTCAGTTTGCCTATGCAGCCATAATCCTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414176.5
CDS-3UTR CCA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACACTGCATGCTCTCAGTaGGTAGTGCAGACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYTACSQ*VVQTPG
Trigger: TCCTGGAGTCTGCACTACCCACTGAGAGCATGCAGT...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACATGGCTGTAGGGAGATaGCTCCTAAGCTTGCACCTG +
Preference number: 4 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYMAVGR*LLSLHL
Trigger: CAGGTGCAAGCTTAGGAGCCATCTCCCTACAGCCAT...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTCTCAGATCTATGTTTTaGCCTTCTTTCCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSLRSMF*PSFLRV
Trigger: GACCCTGAGGAAAGAAGGCCAAAACATAGATCTGAG...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp CAGAAGACTTCTGCTCCTGTCGTCTGCAAGGGGCCCATGCTTGTAACAAACAACTGCTATACTTCGGAATaGATCTTTTCACCAACAGCA +
Preference number: 4 (lower is better)
Translates to: QKTSAPVVCKGPMLVTNNCYTSE*IFSPTA
Trigger: TGCTGTTGGTGAAAAGATTCATTCCGAAGTATAGCA...GTTGTTTGTTACAAGCATGGGCCCCTTGCAGACGACAGGAGCAGAAGTCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444545.5
CDS-3UTR GCA 90 bp CAGAAGACTTCTGCTCCTGTCGTCTGCAAGGGGCCCATGCTTGTAACAAACAACGAAAAGAAAAACTCCTaGCACAAACACAAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: QKTSAPVVCKGPMLVTNNEKKNS*HKHKEE
Trigger: CTCTTCCTTGTGTTTGTGGCAGGAGTTTTTCTTTTC...GTTGTTTGTTACAAGCATGGGCCCCTTGCAGACGACAGGAGCAGAAGTCTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
CDS-3UTR GCA 90 bp AGAACCAGGGAGAGGAGTCGCAGCATCCACATCAGAAGACTTCTGCTCCTGTCGCTGGTAATTTTCACCTaGATAGTTGACCATATGTAT +
Preference number: 4 (lower is better)
Translates to: RTRERSRSIHIRRLLLLSLVIFT*IVDHMY
Trigger: ATACATATGGTCAACTATGCAGGTGAAAATTACCAG...CGACAGGAGCAGAAGTCTTCTGATGTGGATGCTGCGACTCCTCTCCCTGGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414176.5
CDS-3UTR CCA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTAATTCTGAACAGGCCTaGACTGGTAATTTTCACCTG +
Preference number: 4 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSNSEQA*TGNFHL
Trigger: CAGGTGAAAATTACCAGTCCAGGCCTGTTCAGAATT...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACGAACTAGAGGGAAACTaGTCCATCACCCCAGACAGT +
Preference number: 4 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYELEGN*SITPDS
Trigger: ACTGTCTGGGGTGATGGACCAGTTTCCCTCTAGTTC...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACCACCACCAGCTCTTTTaGTGTAAACCACTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYHHQLF*CKPLLH
Trigger: ATGGAGCAGTGGTTTACATCAAAAGAGCTGGTGGTG...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCGAAAAGAAAAACTCCTaGCACAAACACAAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFEKKNS*HKHKEE
Trigger: CTCTTCCTTGTGTTTGTGGCAGGAGTTTTTCTTTTC...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATTCTGCTCCTGTCGTCTaGAAGGGGCCCATGCTTGTA +
Preference number: 4 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHSAPVV*KGPMLV
Trigger: TACAAGCATGGGCCCCTTGCAGACGACAGGAGCAGA...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCTCCAAGAACAAAGTCTaGAAATTTGCTAGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFSKNKV*KFARSV
Trigger: CACACTCCTAGCAAATTTGCAGACTTTGTTCTTGGA...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTGACAATTCCATAAAGTaGAAAAGTCTGCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSDNSIK*KSLLRE
Trigger: CTCTCTCAGCAGACTTTTGCACTTTATGGAATTGTC...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTGCTGCATCTCAGTGTaGTCTTGCACAAGTTATTTA +
Preference number: 4 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSCCISV*SCTSYL
Trigger: TAAATAACTTGTGCAAGACCACACTGAGATGCAGCA...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp ATCTTTTCACCAACAGCAAGACAAAGACTAATGTCATTAGAACACCTAGCACAGGACTCCAGGAGGACATaGGGAGGATTATGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: IFSPTARQRLMSLEHLAQDSRRT*GGLWLH
Trigger: ATGCAGCCATAATCCTCCTCATGTCCTCCTGGAGTC...CTGTGCTAGGTGTTCTAATGACATTAGTCTTTGTCTTGCTGTTGGTGAAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444545.5
CDS-3UTR TCA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTACCAACTATATGAATTaGCTAACAAGAGACAGGTCT +
Preference number: 4 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSTNYMN*LTRDRS
Trigger: AGACCTGTCTCTTGTTAGTCAATTCATATAGTTGGT...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTGACATTGTCATGACATaGTCATCGTGCTTATATTCT +
Preference number: 4 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSDIVMT*SSCLYS
Trigger: AGAATATAAGCACGATGATCATGTCATGACAATGTC...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACTCCACCTCATATAACTaGATGCTCTCAGTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYSTSYN*MLSVGS
Trigger: ACTACCCACTGAGAGCATGCAGTTATATGAGGTGGA...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATCACTCTTCAATGTCATaGCACCCAGCAGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHHSSMS*HPAGSL
Trigger: GAGAGAGCCTGCTGGGTGGCATGACATTGAAGAGTG...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTAAGTTATCTTCAAAATaGGTTGGTTTCCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSKLSSK*VGFPFQ
Trigger: CTGGAAAGGGAAACCAACCCATTTTGAAGATAACTT...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTAGCCCTAGGTATTACTaGCAAACCATACAACTAATT +
Preference number: 4 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSSPRYY*QTIQLI
Trigger: AATTAGTTGTATGGTTTGCCAGTAATACCTAGGGCT...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTAAGAGACAGGTCTTATaGTGCAATAACAAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSKRQVL*CNNKKQ
Trigger: CTGCTTTTTGTTATTGCACCATAAGACCTGTCTCTT...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACCGGGGCACAAATGACTaGTATGTGTATAACATCAGC +
Preference number: 4 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYRGTND*YVYNIS
Trigger: GCTGATGTTATACACATACCAGTCATTTGTGCCCCG...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACAAGATCTTGTCTACCTaGGTCAAAGGATACATCAGG +
Preference number: 4 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYKILST*VKGYIR
Trigger: CCTGATGTATCCTTTGACTCAGGTAGACAAGATCTT...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACAGACATATGGGGGCTTaGATTCTGATTCTACCACTT +
Preference number: 4 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYRHMGA*ILILPL
Trigger: AAGTGGTAGAATCAGAATTCAAGCCCCCATATGTCT...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACAAAGGAAGTAGAATATaGGCCCTGGAAGCAGACATA +
Preference number: 4 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYKGSRI*ALEADI
Trigger: TATGTCTGCTTCCAGGGCTCATATTCTACTTCCTTT...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp CACAAACACAAGGAAGAGTTTGAAATCCATGATGTTTCGATTCACATGTATCATTCTGCTCCTGTCGTCTaGAAGGGGCCCATGCTTGTA +
Preference number: 4 (lower is better)
Translates to: HKHKEEFEIHDVSIHMYHSAPVV*KGPMLV
Trigger: TACAAGCATGGGCCCCTTGCAGACGACAGGAGCAGA...ATGATACATGTGAATCGAAACATCATGGATTTCAAACTCTTCCTTGTGTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444545.5
CDS-3UTR CCA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATCCAGATTTAGTGCCCTaGTGTCGACAAAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHPDLVP*CRQSTC
Trigger: ACAGGTGCTTTGTCGACACCAGGGCACTAAATCTGG...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CAA 72 bp GTAGAATATGAGCCCTGGAAGCAGACATATGGGGGCTaGAATTCTGATTCTACCACTTTAGCTATATGTGTC +
Preference number: 4 (lower is better)
Translates to: VEYEPWKQTYGG*NSDSTTLAICV
Trigger: GACACATATAGCTAAAGTGGTAGAATCAGAATTCAAGCCCCCATATGTCTGCTTCCAGGGCTCATATTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATCTTCCTTGTCCAGAATaGAGTCAACTTGAAGGTCGC +
Preference number: 4 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHLPCPE*SQLEGR
Trigger: GCGACCTTCAAGTTGACTTCATTCTGGACAAGGAAG...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATTACACCTATGGTGTGTaGGGCACAAAGCCAACTTCC +
Preference number: 4 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNYTYGV*GTKPTS
Trigger: GGAAGTTGGCTTTGTGCCTCACACACCATAGGTGTA...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATGTTTCAGCATCAGCTTaGTCCCTGTACTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNVSASA*SLYSSS
Trigger: GGAAGACGAGTACAGGGAGCAAGCTGATGCTGAAAC...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATAGAATCCCTGCCCTTTaGCCACTTCCTTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNRIPAL*PLPCPE
Trigger: TTCTGGACAAGGAAGTGGGCAAAGGGCAGGGATTCT...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATACCTCTCTGTCTTCCTaGAGGTGTCTTCAAACTTCC +
Preference number: 4 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHTSLSS*RCLQTS
Trigger: GGAAGTTTGAAGACACCTGCAGGAAGACAGAGAGGT...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATGACTACAGTGTCCATTaGTGCGGGGCACAAATGACT +
Preference number: 4 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNDYSVH*CGAQMT
Trigger: AGTCATTTGTGCCCCGCAGCAATGGACACTGTAGTC...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATTGTGATGGTTACACCTaGCTAGCTGCCCATGAAGAG +
Preference number: 4 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNCDGYT*LAAHEE
Trigger: CTCTTCATGGGCAGCTAGCCAGGTGTAACCATCACA...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CAA 72 bp TGGTATGTGTATAACATCAGCAGATGTAGTCACCTCTaGAATGCCTTATCCATGGGGTCATTTCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: WYVYNISRCSHL*NALSMGSFPSL
Trigger: AAGTGAAGGAAATGACCCCATGGATAAGGCATTCAAGAGGTGACTACATCTGCTGATGTTATACACATACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATACTGATTTCTTCAGGTaGCAAGTGGCTTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNTDFFR*QVASSK
Trigger: CTTGGAGGAAGCCACTTGTCACCTGAAGAAATCAGT...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATGCTCTTCATGCAGACTaGTTTCTTCAGGTGACAAGT +
Preference number: 4 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHALHAD*FLQVTS
Trigger: ACTTGTCACCTGAAGAAATCAGTCTGCATGAAGAGC...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATAGAATGAAGTCAACTTaGAGGTCGCATGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNRMKST*RSHVRQ
Trigger: CTGCCTGACATGCGACCTTCAAGTTGACTTCATTCT...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp AACTCCTGCCACAAACACAAGGAAGAGTTTGAAATCCATGATGTTTCGATTCACAGCACACAGTCTCCCTaGATAGTTGACCATATGTAT +
Preference number: 4 (lower is better)
Translates to: NSCHKHKEEFEIHDVSIHSTQSP*IVDHMY
Trigger: ATACATATGGTCAACTATGCAGGGAGACTGTGTGCT...GTGAATCGAAACATCATGGATTTCAAACTCTTCCTTGTGTTTGTGGCAGGAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343105.9
ENST00000444545.5
CDS-3UTR GCA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATCCTCATATAACTGCATaGTCTCAGTGGGTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNPHITA*SQWVVQ
Trigger: CTGCACTACCCACTGAGAGCATGCAGTTATATGAGG...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATTCTCAGAAGGCAGCTTaGTCCTGTTGTCACCTAAAA +
Preference number: 4 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHSQKAA*SCCHLK
Trigger: TTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGA...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATGTGCTACTCAAAGTGTaGTCAATGACTGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNVLLKV*SMTGAV
Trigger: GACAGCACCAGTCATTGAGCACACTTTGAGTAGCAC...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATTACTTTGGAAAACACTaGTCCAGCATGTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHYFGKH*SSMSQV
Trigger: GACCTGAGACATGCTGGACCAGTGTTTTCCAAAGTA...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATTCAGGAAAGCAGCAGTaGCAAAATTCTGTCTATCCT +
Preference number: 4 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHSGKQQ*QNSVYP
Trigger: AGGATAGACAGAATTTTGGCACTGCTGCTTTCCTGA...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACTCTCCCAATCTACAGTaGCATACTATACATATTTAC +
Preference number: 4 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYSPNLQ*HTIHIY
Trigger: GTAAATATGTATAGTATGGCACTGTAGATTGGGAGA...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACGAGGGAAACATTTCTTaGAAGAGTTATCTGTACATT +
Preference number: 4 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYEGNIS*KSYLYI
Trigger: AATGTACAGATAACTCTTCCAAGAAATGTTTCCCTC...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CAA 72 bp TCCTGCAGGTGTCTTCAAACTTCCACATCCATTATGTaGTCTATCTTGCTTTCAGTTGGACAAGAAAAGCTA +
Preference number: 4 (lower is better)
Translates to: SCRCLQTSTSIM*SILLSVGQEKL
Trigger: TAGCTTTTCTTGTCCAACTGAAAGCAAGATAGACAACATAATGGATGTGGAAGTTTGAAGACACCTGCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp CACAAACACAAGGAAGAGTTTGAAATCCATGATGTTTCGATTCACATGTATCATGTCTCCCTGCATAGTTaGCCATATGTATTTCCACTC +
Preference number: 4 (lower is better)
Translates to: HKHKEEFEIHDVSIHMYHVSLHS*PYVFPL
Trigger: GAGTGGAAATACATATGGTCAACTATGCAGGGAGAC...ATGATACATGTGAATCGAAACATCATGGATTTCAAACTCTTCCTTGTGTTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343105.9
ENST00000444545.5
CDS-3UTR GCA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATCCATACTGCTCTTCATaGAGACTGATTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNPYCSS*RLISSG
Trigger: ACCTGAAGAAATCAGTCTGCATGAAGAGCAGTATGG...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATGTCCTTCATGTCAGATaGACATTCCCCTGTAATTCA +
Preference number: 4 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNVLHVR*TFPCNS
Trigger: TGAATTACAGGGGAATGTCCATCTGACATGAAGGAC...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATTTTCACCTGCATAGTTaGCCATATGTATTTCCACTC +
Preference number: 4 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNFHLHS*PYVFPL
Trigger: GAGTGGAAATACATATGGTCAACTATGCAGGTGAAA...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR TCA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATTCAGAATACCTTTATTaGCCAACACTTGGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNSEYLY*PTLGSS
Trigger: GCTACTACCAAGTGTTGGTCAATAAAGGTATTCTGA...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATATCTCAGTGTGGTCTTaGACAAGTTATTTAACCTCT +
Preference number: 4 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHISVWS*TSYLTS
Trigger: AGAGGTTAAATAACTTGTGCAAGACCACACTGAGAT...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATCACAGTCTCCCTGTATaGATTGATGATTATGGTTAT +
Preference number: 4 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHHSLPV*IDDYGY
Trigger: ATAACCATAATCATCAATCCATACAGGGAGACTGTG...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATCTTTGTCAACAGACCTaGTATCTCATCCCATTAACA +
Preference number: 4 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNLCQQT*YLIPLT
Trigger: TGTTAATGGGATGAGATACCAGGTCTGTTGACAAAG...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CAA 72 bp TTGGTTGTGAATCACTACCTGTACCAACTATATGAATaGACTAACAAGAGACAGGTCTTATGGTGCAATAAC +
Preference number: 4 (lower is better)
Translates to: LVVNHYLYQLYE*TNKRQVLWCNN
Trigger: GTTATTGCACCATAAGACCTGTCTCTTGTTAGTCAATTCATATAGTTGGTACAGGTAGTGATTCACAACCAA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR GCA 90 bp CACAAACACAAGGAAGAGTTTGAAATCCATGATGTTTCGATTCACATGTATCATGAAAAGAAAAACTCCTaGCACAAACACAAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: HKHKEEFEIHDVSIHMYHEKKNS*HKHKEE
Trigger: CTCTTCCTTGTGTTTGTGGCAGGAGTTTTTCTTTTC...ATGATACATGTGAATCGAAACATCATGGATTTCAAACTCTTCCTTGTGTTTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343105.9
ENST00000444545.5
CDS-3UTR GCA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATCTGGTAATTTTCACCTaGATAGTTGACCATATGTAT +
Preference number: 4 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNLVIFT*IVDHMY
Trigger: ATACATATGGTCAACTATGCAGGTGAAAATTACCAG...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CCA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATATCTCTAGTCAATGTTaGTATTCTTTCCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNISSQC*YSFPFS
Trigger: AGAGAAAGGGAAAGAATACCAACATTGACTAGAGAT...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
3UTR CAA 72 bp GGGAAACATTTCTTGGAAGAGTTATCTGTACATTGCTaGATGGGGATTAGAATTGTGATCAGTACTATAATA +
Preference number: 4 (lower is better)
Translates to: GKHFLEELSVHC*MGIRIVISTII
Trigger: TATTATAGTACTGATCACAATTCTAATCCCCATCAAGCAATGTACAGATAACTCTTCCAAGAAATGTTTCCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAACAGCCACCACCGCCCTaGGCGCGGCCCCATTTCGTT +
Preference number: 5 (lower is better)
Translates to: HATQQALSEGSLLLLSPKQPPPP*ARPHFV
Trigger: AACGAAATGGGGCCGCGCCAAGGGCGGTGGTGGCTG...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS GCA 90 bp GCCCGGCGTAGCTCCTCCAGAGCACTGTTCGTTTCAGCATCAGCTTaGTCCCTGTACTCGTCTTCCGTAAGATATTTCACCACCAGCTCT +
Preference number: 5 (lower is better)
Translates to: ARRSSSRALFVSASA*SLYSSSVRYFTTSS
Trigger: AGAGCTGGTGGTGAAATATCTTACGGAAGACGAGTACAGGGAGCAAGCTGATGCTGAAACGAACAGTGCTCTGGAGGAGCTACGCCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS GCA 90 bp GTCAACTTGAAGGTCGCATGTCAGGCAGTACTCGGGTTAAAGAGCTaGTCTTCCAAGAAGGCACCCCCAAGGCCATACTGCTCTTCATGC +
Preference number: 5 (lower is better)
Translates to: VNLKVACQAVLGLKS*SSKKAPPRPYCSSC
Trigger: GCATGAAGAGCAGTATGGCCTTGGGGGTGCCTTCTTGGAAGAGCAGCTCTTTAACCCGAGTACTGCCTGACATGCGACCTTCAAGTTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS CCA 90 bp CAACACGCATTGATGTACTGTACAAAAGGCCGTGTGCTGAAAGTCTaGAGACTAGGGTCAGCTGTGCCAGTGACAAGCTGTGTGACCCTG +
Preference number: 5 (lower is better)
Translates to: QHALMYCTKGRVLKV*RLGSAVPVTSCVTL
Trigger: CAGGGTCACACAGCTTGTCACTGGCACAGCTGACCCTAGTCTCCAGACTTTCAGCACACGGCCTTTTGTACAGTACATCAATGCGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414176.5
ENST00000421038.1
ENST00000492292.1
CDS-3UTR CAA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGATGGCTCCTAAGCTaGCACCTGAAGATCTTGTCT +
Preference number: 5 (lower is better)
Translates to: HATQQALSEGSLLLLSPKRWLLS*HLKILS
Trigger: AGACAAGATCTTCAGGTGCAAGCTTAGGAGCCATCT...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS GCA 90 bp AGCTGCTCTTCCAAGAAGGCACCCCCAAGGCCATACTGCTCTTCATaGAGACTGATTTCTTCAGGTGACAAGTGGCTTCCTCCAAGAACA +
Preference number: 5 (lower is better)
Translates to: SCSSKKAPPRPYCSS*RLISSGDKWLPPRT
Trigger: TGTTCTTGGAGGAAGCCACTTGTCACCTGAAGAAATCAGTCTGCATGAAGAGCAGTATGGCCTTGGGGGTGCCTTCTTGGAAGAGCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS GCA 90 bp GGGTTAAAGAGCTGCTCTTCCAAGAAGGCACCCCCAAGGCCATACTaGTCTTCATGCAGACTGATTTCTTCAGGTGACAAGTGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: GLKSCSSKKAPPRPY*SSCRLISSGDKWLP
Trigger: AGGAAGCCACTTGTCACCTGAAGAAATCAGTCTGCATGAAGAGCAGTATGGCCTTGGGGGTGCCTTCTTGGAAGAGCAGCTCTTTAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp AGGGAGAGGAGTCGCAGCATCCACATCAGAAGACTTCTGCTCCTGTCGTCTGCAATAGAAAGTAGGGCTTaGACTCAGGGTCCTTGCATA +
Preference number: 5 (lower is better)
Translates to: RERSRSIHIRRLLLLSSAIESRA*TQGPCI
Trigger: TATGCAAGGACCCTGAGTCAAAGCCCTACTTTCTAT...TGCAGACGACAGGAGCAGAAGTCTTCTGATGTGGATGCTGCGACTCCTCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
CDS-3UTR CAA 90 bp ACCAGGGAGAGGAGTCGCAGCATCCACATCAGAAGACTTCTGCTCCTGTCGTCTTTACCTTCTCTAGTCTaGAGACCAAAGGAATGCGAG +
Preference number: 5 (lower is better)
Translates to: TRERSRSIHIRRLLLLSSLPSLV*RPKECE
Trigger: CTCGCATTCCTTTGGTCTCAAGACTAGAGAAGGTAA...AGACGACAGGAGCAGAAGTCTTCTGATGTGGATGCTGCGACTCCTCTCCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414176.5
CDS-3UTR CAA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAACCACAGCAAATGTTTTaGCCACCGTTCACTAGAACA +
Preference number: 5 (lower is better)
Translates to: HATQQALSEGSLLLLSPKPQQMF*PPFTRT
Trigger: TGTTCTAGTGAACGGTGGCAAAAACATTTGCTGTGG...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS TCA 90 bp CTTCCAAGAAGGCACCCCCAAGGCCATACTGCTCTTCATGCAGACTaGTTTCTTCAGGTGACAAGTGGCTTCCTCCAAGAACAAAGTCTG +
Preference number: 5 (lower is better)
Translates to: LPRRHPQGHTALHAD*FLQVTSGFLQEQSL
Trigger: CAGACTTTGTTCTTGGAGGAAGCCACTTGTCACCTGAAGAAATCAGTCTGCATGAAGAGCAGTATGGCCTTGGGGGTGCCTTCTTGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp TTATGGCTGCATAGGCAAACTGAGGCACGGCCACACCAGCATAGACCAGAACCAATAGAAAGTAGGGCTTaGACTCAGGGTCCTTGCATA +
Preference number: 5 (lower is better)
Translates to: LWLHRQTEARPHQHRPEPIESRA*TQGPCI
Trigger: TATGCAAGGACCCTGAGTCAAAGCCCTACTTTCTAT...TGGTTCTGGTCTATGCTGGTGTGGCCGTGCCTCAGTTTGCCTATGCAGCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
CDS-3UTR CAA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAACTATAGGAAGAGTATaGCAGAGTCTTCTGACACAG +
Preference number: 5 (lower is better)
Translates to: HATQQALSEGSLLLLSPKTIGRV*QSLLTQ
Trigger: CTGTGTCAGAAGACTCTGCAATACTCTTCCTATAGT...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAACCCTGAGATTGTCTaGCCATGTTCAAATCTTTCC +
Preference number: 5 (lower is better)
Translates to: HATQQALSEGSLLLLSPKNPEIV*PCSNLS
Trigger: GGAAAGATTTGAACATGGCAAGACAATCTCAGGGTT...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp CACAAACACAAGGAAGAGTTTGAAATCCATGATGTTTCGATTCACATGTATCATCAGCCACCACCGCCCTaGGCGCGGCCCCATTTCGTT +
Preference number: 5 (lower is better)
Translates to: HKHKEEFEIHDVSIHMYHQPPPP*ARPHFV
Trigger: AACGAAATGGGGCCGCGCCAAGGGCGGTGGTGGCTG...ATGATACATGTGAATCGAAACATCATGGATTTCAAACTCTTCCTTGTGTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343105.9
CDS-3UTR CAA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAGTATTTCCACTCCACTaGGGAATTTTGATTGTAGCA +
Preference number: 5 (lower is better)
Translates to: HATQQALSEGSLLLLSPKVFPLH*GILIVA
Trigger: TGCTACAATCAAAATTCCCAAGTGGAGTGGAAATAC...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp GGATTATGGCTGCATAGGCAAACTGAGGCACGGCCACACCAGCATAGACCAGAAGGATTTCAACACGCATaGATGTACTGTACAAAAGGC +
Preference number: 5 (lower is better)
Translates to: GLWLHRQTEARPHQHRPEGFQHA*MYCTKG
Trigger: GCCTTTTGTACAGTACATCAATGCGTGTTGAAATCC...TTCTGGTCTATGCTGGTGTGGCCGTGCCTCAGTTTGCCTATGCAGCCATAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414176.5
CDS-3UTR CAA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTCCTCAGATCTATGTTTaGGCCTTCTTTCCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSPQIYV*AFFPQG
Trigger: ACCCTGAGGAAAGAAGGCCAAAACATAGATCTGAGG...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCAGATGTAGTCACCTCTaGAATGCCTTATCCATGGGG +
Preference number: 5 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFRCSHL*NALSMG
Trigger: CCCCATGGATAAGGCATTCAAGAGGTGACTACATCT...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS TCA 90 bp ACCCCCAAGGCCATACTGCTCTTCATGCAGACTGATTTCTTCAGGTaGCAAGTGGCTTCCTCCAAGAACAAAGTCTGCAAATTTGCTAGG +
Preference number: 5 (lower is better)
Translates to: TPKAILLFMQTDFFR*QVASSKNKVCKFAR
Trigger: CCTAGCAAATTTGCAGACTTTGTTCTTGGAGGAAGCCACTTGTCACCTGAAGAAATCAGTCTGCATGAAGAGCAGTATGGCCTTGGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp ATAGACCAGAACCAGGGAGAGGAGTCGCAGCATCCACATCAGAAGACTTCTGCTCTCCACTTGGGAATTTaGATTGTAGCAGTAACAGTC +
Preference number: 5 (lower is better)
Translates to: IDQNQGEESQHPHQKTSALHLGI*IVAVTV
Trigger: GACTGTTACTGCTACAATCAAAATTCCCAAGTGGAG...AGCAGAAGTCTTCTGATGTGGATGCTGCGACTCCTCTCCCTGGTTCTGGTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
CDS-3UTR CAA 90 bp GCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTACAAAGTCTGCAAATTaGCTAGGAGTGTGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: ALSEGSLLLLSPKSTSLSTKSAN*LGVWSL
Trigger: CAGACTCCACACTCCTAGCAAATTTGCAGACTTTGT...AGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp CATGCCACCCAGCAGGCTCTCTCAGAAGGCAGCTTGCTCCTGTTGTCACCTAAATCCACATCCATTATGTaGTCTATCTTGCTTTCAGTT +
Preference number: 5 (lower is better)
Translates to: HATQQALSEGSLLLLSPKSTSIM*SILLSV
Trigger: AACTGAAAGCAAGATAGACAACATAATGGATGTGGA...TTTAGGTGACAACAGGAGCAAGCTGCCTTCTGAGAGAGCCTGCTGGGTGGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACAGACTACAGTGTCCATaGCTGCGGGGCACAAATGAC +
Preference number: 5 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYRLQCP*LRGTND
Trigger: GTCATTTGTGCCCCGCAGCAATGGACACTGTAGTCT...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS CCA 90 bp AGGCCATACTGCTCTTCATGCAGACTGATTTCTTCAGGTGACAAGTaGCTTCCTCCAAGAACAAAGTCTGCAAATTTGCTAGGAGTGTGG +
Preference number: 5 (lower is better)
Translates to: RPYCSSCRLISSGDK*LPPRTKSANLLGVW
Trigger: CCACACTCCTAGCAAATTTGCAGACTTTGTTCTTGGAGGAAGCCACTTGTCACCTGAAGAAATCAGTCTGCATGAAGAGCAGTATGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp CATATAACTGCATGCTCTCAGTGGGTAGTGCAGACTCCAGGAGGACATGAGGAGGTATTTCCACTCCACTaGGGAATTTTGATTGTAGCA +
Preference number: 5 (lower is better)
Translates to: HITACSQWVVQTPGGHEEVFPLH*GILIVA
Trigger: TGCTACAATCAAAATTCCCAAGTGGAGTGGAAATAC...CTCCTCATGTCCTCCTGGAGTCTGCACTACCCACTGAGAGCATGCAGTTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000444545.5
CDS-3UTR CAA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCTATCTTCAAAATGGGTaGGTTTCCCTTTCCAGACTG +
Preference number: 5 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFYLQNG*VSLSRL
Trigger: CAGTCTGGAAAGGGAAACCAACCCATTTTGAAGATA...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCCATCTCAGTGTGGTCTaGCACAAGTTATTTAACCTC +
Preference number: 5 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFHLSVV*HKLFNL
Trigger: GAGGTTAAATAACTTGTGCAAGACCACACTGAGATG...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACCAGAATGAAGTCAACTaGAAGGTCGCATGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYQNEVN*KVACQA
Trigger: TGCCTGACATGCGACCTTCAAGTTGACTTCATTCTG...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp GCTTGCTCCTGTTGTCACCTAAAAGTACCTCTCTGTCTTCCTGCAGGTGTCTTCATCTTAACCCTGAGATaGTCTTGCCATGTTCAAATC +
Preference number: 5 (lower is better)
Translates to: ACSCCHLKVPLCLPAGVFILTLR*SCHVQI
Trigger: GATTTGAACATGGCAAGACAATCTCAGGGTTAAGAT...GAAGACACCTGCAGGAAGACAGAGAGGTACTTTTAGGTGACAACAGGAGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACGGCAGCCCCAGCAGATaGTTCATGTGTTATTTACTC +
Preference number: 5 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYGSPSR*FMCYLL
Trigger: GAGTAAATAACACATGAACAATCTGCTGGGGCTGCC...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS TCA 90 bp CTCCCTGTACTCGTCTTCCGTAAGATATTTCACCACCAGCTCTTTTaGTGTAAACCACTGCTCCATTTTCCACCTCATATAACTGCATGC +
Preference number: 5 (lower is better)
Translates to: LPVLVFRKIFHHQLF*CKPLLHFPPHITAC
Trigger: GCATGCAGTTATATGAGGTGGAAAATGGAGCAGTGGTTTACATCAAAAGAGCTGGTGGTGAAATATCTTACGGAAGACGAGTACAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACTTTATTGACCAACACTaGGTAGTAGCCTGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYFIDQH*VVACEL
Trigger: CAGCTCACAGGCTACTACCAAGTGTTGGTCAATAAA...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACCCTTTCCAGACTGACTaGTTTTTCTCCACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYPFQTD*FFSTAN
Trigger: ATTTGCTGTGGAGAAAAACAAGTCAGTCTGGAAAGG...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS TCA 90 bp TCCTGTCGTCTGCAAGGGGCCCATGCTTGTAACAAACAACAAAGCTaGAAAATCCAACTATCAAGACATAGCCTTCGGAATGAATCTTTT +
Preference number: 5 (lower is better)
Translates to: SCRLQGAHACNKQQS*KIQLSRHSLRNESF
Trigger: AAAAGATTCATTCCGAAGGCTATGTCTTGATAGTTGGATTTTTCAGCTTTGTTGTTTGTTACAAGCATGGGCCCCTTGCAGACGACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414176.5
CDS-3UTR CAA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATGGCAGCTTGCTCCTGTaGTCACCTAAAAGTACCTCT +
Preference number: 5 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNGSLLL*SPKSTS
Trigger: AGAGGTACTTTTAGGTGACAACAGGAGCAAGCTGCC...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS CCA 90 bp TATCTTCTTGACAGGCTCCACAGAGAAGCACACAGTCTCCCTGTATaGATTGATGATTATGGTTATTTCGTTAGATTCCTTTGGTATCCA +
Preference number: 5 (lower is better)
Translates to: YLLDRLHREAHSLPV*IDDYGYFVRFLWYP
Trigger: TGGATACCAAAGGAATCTAACGAAATAACCATAATCATCAATCCATACAGGGAGACTGTGTGCTTCTCTGTGGAGCCTGTCAAGAAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409150.8
ENST00000414176.5
ENST00000492292.1
CDS-3UTR CAA 90 bp AACTCCTGCCACAAACACAAGGAAGAGTTTGAAATCCATGATGTTTCGATTCACCTCCACTTGGGAATTTaGATTGTAGCAGTAACAGTC +
Preference number: 5 (lower is better)
Translates to: NSCHKHKEEFEIHDVSIHLHLGI*IVAVTV
Trigger: GACTGTTACTGCTACAATCAAAATTCCCAAGTGGAG...GTGAATCGAAACATCATGGATTTCAAACTCTTCCTTGTGTTTGTGGCAGGAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343105.9
ENST00000444545.5
CDS-3UTR CAA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATATAGAAAGTAGGGCTTaGACTCAGGGTCCTTGCATA +
Preference number: 5 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHIESRA*TQGPCI
Trigger: TATGCAAGGACCCTGAGTCAAAGCCCTACTTTCTAT...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATGGCTGTCACAGAATTTaGGTATCCACCTACAGTACA +
Preference number: 5 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHGCHRI*VSTYST
Trigger: TGTACTGTAGGTGGATACCAAAATTCTGTGACAGCC...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp CCTTCATTCAAGGTAAGTGGTAGTGGCTGTCACAGAATTTTGGTATCCACCTACGTCAAAGAGTTCAACTaGCTAACAACAGTAAGCTTT +
Preference number: 5 (lower is better)
Translates to: PSFKVSGSGCHRILVSTYVKEFN*LTTVSF
Trigger: AAAGCTTACTGTTGTTAGCAAGTTGAACTCTTTGAC...GTAGGTGGATACCAAAATTCTGTGACAGCCACTACCACTTACCTTGAATGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATCAGACATATGGGGGCTaGAATTCTGATTCTACCACT +
Preference number: 5 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHQTYGG*NSDSTT
Trigger: AGTGGTAGAATCAGAATTCAAGCCCCCATATGTCTG...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATCTCCACTTGGGAATTTaGATTGTAGCAGTAACAGTC +
Preference number: 5 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHLHLGI*IVAVTV
Trigger: GACTGTTACTGCTACAATCAAAATTCCCAAGTGGAG...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp AACTCCTGCCACAAACACAAGGAAGAGTTTGAAATCCATGATGTTTCGATTCACGTATTTCCACTCCACTaGGGAATTTTGATTGTAGCA +
Preference number: 5 (lower is better)
Translates to: NSCHKHKEEFEIHDVSIHVFPLH*GILIVA
Trigger: TGCTACAATCAAAATTCCCAAGTGGAGTGGAAATAC...GTGAATCGAAACATCATGGATTTCAAACTCTTCCTTGTGTTTGTGGCAGGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343105.9
ENST00000444545.5
CDS-3UTR CAA 90 bp CACAAACACAAGGAAGAGTTTGAAATCCATGATGTTTCGATTCACATGTATCATATAGAAAGTAGGGCTTaGACTCAGGGTCCTTGCATA +
Preference number: 5 (lower is better)
Translates to: HKHKEEFEIHDVSIHMYHIESRA*TQGPCI
Trigger: TATGCAAGGACCCTGAGTCAAAGCCCTACTTTCTAT...ATGATACATGTGAATCGAAACATCATGGATTTCAAACTCTTCCTTGTGTTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343105.9
ENST00000444545.5
CDS-3UTR CAA 90 bp ATGACTGGTGCTGTCAAACTACTGCTGGTATGTGACAACATAGAAATTAGACATTACCAACTATATGAATaGACTAACAAGAGACAGGTC +
Preference number: 5 (lower is better)
Translates to: MTGAVKLLLVCDNIEIRHYQLYE*TNKRQV
Trigger: GACCTGTCTCTTGTTAGTCAATTCATATAGTTGGTA...ATGTCTAATTTCTATGTTGTCACATACCAGCAGTAGTTTGACAGCACCAGTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS-3UTR CAA 90 bp CACAAACACAAGGAAGAGTTTGAAATCCATGATGTTTCGATTCACATGTATCATGTATTTCCACTCCACTaGGGAATTTTGATTGTAGCA +
Preference number: 5 (lower is better)
Translates to: HKHKEEFEIHDVSIHMYHVFPLH*GILIVA
Trigger: TGCTACAATCAAAATTCCCAAGTGGAGTGGAAATAC...ATGATACATGTGAATCGAAACATCATGGATTTCAAACTCTTCCTTGTGTTTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343105.9
ENST00000444545.5
CDS-3UTR CAA 90 bp TCTCATGAAAAAGAGTTCTGTGGTCAAATTAAGCAAGAAACTGCAGCACACAATTTATCTGTACATTGCTaGATGGGGATTAGAATTGTG +
Preference number: 5 (lower is better)
Translates to: SHEKEFCGQIKQETAAHNLSVHC*MGIRIV
Trigger: CACAATTCTAATCCCCATCAAGCAATGTACAGATAA...ATTGTGTGCTGCAGTTTCTTGCTTAATTTGACCACAGAACTCTTTTTCATGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS TCA 72 bp AGGCACCCCCAAGGCCATACTGCTCTTCATGCAGACTaGTTTCTTCAGGTGACAAGTGGCTTCCTCCAAGAA +
Preference number: 6 (lower is better)
Translates to: RHPQGHTALHAD*FLQVTSGFLQE
Trigger: TTCTTGGAGGAAGCCACTTGTCACCTGAAGAAATCAGTCTGCATGAAGAGCAGTATGGCCTTGGGGGTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS GCA 72 bp TCCAAGAAGGCACCCCCAAGGCCATACTGCTCTTCATaGAGACTGATTTCTTCAGGTGACAAGTGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: SKKAPPRPYCSS*RLISSGDKWLP
Trigger: AGGAAGCCACTTGTCACCTGAAGAAATCAGTCTGCATGAAGAGCAGTATGGCCTTGGGGGTGCCTTCTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS GCA 72 bp AGCTGCTCTTCCAAGAAGGCACCCCCAAGGCCATACTaGTCTTCATGCAGACTGATTTCTTCAGGTGACAAG +
Preference number: 6 (lower is better)
Translates to: SCSSKKAPPRPY*SSCRLISSGDK
Trigger: CTTGTCACCTGAAGAAATCAGTCTGCATGAAGAGCAGTATGGCCTTGGGGGTGCCTTCTTGGAAGAGCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS GCA 72 bp AGCTCCTCCAGAGCACTGTTCGTTTCAGCATCAGCTTaGTCCCTGTACTCGTCTTCCGTAAGATATTTCACC +
Preference number: 6 (lower is better)
Translates to: SSSRALFVSASA*SLYSSSVRYFT
Trigger: GGTGAAATATCTTACGGAAGACGAGTACAGGGAGCAAGCTGATGCTGAAACGAACAGTGCTCTGGAGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS CCA 72 bp TTGATGTACTGTACAAAAGGCCGTGTGCTGAAAGTCTaGAGACTAGGGTCAGCTGTGCCAGTGACAAGCTGT +
Preference number: 6 (lower is better)
Translates to: LMYCTKGRVLKV*RLGSAVPVTSC
Trigger: ACAGCTTGTCACTGGCACAGCTGACCCTAGTCTCCAGACTTTCAGCACACGGCCTTTTGTACAGTACATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414176.5
ENST00000421038.1
ENST00000492292.1
CDS CAA 72 bp TCTCTGAGTTTCGGTTGCTTCTGTAAAACGAGGGAATaGGGCGACTGGATCGCGCGGTTGCTTCTAATTCTA +
Preference number: 6 (lower is better)
Translates to: SLSFGCFCKTRE*GDWIARLLLIL
Trigger: TAGAATTAGAAGCAACCGCGCGATCCAGTCGCCCAATTCCCTCGTTTTACAGAAGCAACCGAAACTCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000421038.1
CDS CCA 72 bp ATGTCTTTCTGCGATATATACAATTCTGAACAGGCCTaGACTGGTAATTTTCACCTGCCGCTCACGTGGGAC +
Preference number: 6 (lower is better)
Translates to: MSFCDIYNSEQA*TGNFHLPLTWD
Trigger: GTCCCACGTGAGCGGCAGGTGAAAATTACCAGTCCAGGCCTGTTCAGAATTGTATATATCGCAGAAAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492292.1
CDS TCA 72 bp GCCATACTGCTCTTCATGCAGACTGATTTCTTCAGGTaGCAAGTGGCTTCCTCCAAGAACAAAGTCTGCAAA +
Preference number: 6 (lower is better)
Translates to: AILLFMQTDFFR*QVASSKNKVCK
Trigger: TTTGCAGACTTTGTTCTTGGAGGAAGCCACTTGTCACCTGAAGAAATCAGTCTGCATGAAGAGCAGTATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS CCA 72 bp TTCGGTTGCTTCTGTAAAACGAGGGAATTGGGCGACTaGATCGCGCGGTTGCTTCTAATTCTAAAATTACAA +
Preference number: 6 (lower is better)
Translates to: FGCFCKTRELGD*IARLLLILKLQ
Trigger: TTGTAATTTTAGAATTAGAAGCAACCGCGCGATCCAGTCGCCCAATTCCCTCGTTTTACAGAAGCAACCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414176.5
ENST00000421038.1
CDS CCA 72 bp GACAGGCTCCACAGAGAAGCACACAGTCTCCCTGTATaGATTGATGATTATGGTTATTTCGTTAGATTCCTT +
Preference number: 6 (lower is better)
Translates to: DRLHREAHSLPV*IDDYGYFVRFL
Trigger: AAGGAATCTAACGAAATAACCATAATCATCAATCCATACAGGGAGACTGTGTGCTTCTCTGTGGAGCCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409150.8
ENST00000414176.5
ENST00000492292.1
CDS TCA 72 bp CTCGTCTTCCGTAAGATATTTCACCACCAGCTCTTTTaGTGTAAACCACTGCTCCATTTTCCACCTCATATA +
Preference number: 6 (lower is better)
Translates to: LVFRKIFHHQLF*CKPLLHFPPHI
Trigger: TATATGAGGTGGAAAATGGAGCAGTGGTTTACATCAAAAGAGCTGGTGGTGAAATATCTTACGGAAGACGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409150.8
CDS CAA 90 bp TTCTTGACAGGCTCCACAGAGAAGCACACAGTCTCCCTGTATGGATaGATGATTATGGTTATTTCGTTAGATTCCTTTGGTATCCAAAAG +
Preference number: 6 (lower is better)
Translates to: FLTGSTEKHTVSLYG*MIMVISLDSFGIQK
Trigger: CTTTTGGATACCAAAGGAATCTAACGAAATAACCATAATCATCAATCCATACAGGGAGACTGTGTGCTTCTCTGTGGAGCCTGTCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409150.8
ENST00000414176.5
ENST00000492292.1