RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NELL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000165973

Ensembl transcript IDs: ENST00000298925.9, ENST00000325319.9, ENST00000357134.10, ENST00000524738.1, ENST00000527873.5, ENST00000528046.5, ENST00000528495.1, ENST00000529218.5, ENST00000529595.1, ENST00000530672.1, ENST00000532434.5, ENST00000534263.1

Found 438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTaGATGAGTAGGCATTTAAGAAGGTTCAGCACTATGAAATGTATG +
Preference number: 1 (lower is better)
Translates to: WPFPSLSYLASACLS*MSRHLRRFSTMKCM
Trigger: CATACATTTCATAGTGCTGAACCTTCTTAAATGCCTACTCATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
3UTR-3UTR CCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTCTTAATCACGTTGGATaGTCATTTCGTCCATTCTTC +
Preference number: 2 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFLNHVG*SFRPFF
Trigger: GAAGAATGGACGAAATGACCATCCAACGTGATTAAG...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
3UTR-3UTR CCA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGCTTAATCACGTTGGATaGTCATTTCGTCCATTCTTC +
Preference number: 2 (lower is better)
Translates to: MFLALPLFVILGFSLFKLLNHVG*SFRPFF
Trigger: GAAGAATGGACGAAATGACCATCCAACGTGATTAAG...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
3UTR-3UTR CCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCAACACCGTCCTCAGGTaGAAACTTTGGCAATTATCT +
Preference number: 2 (lower is better)
Translates to: LCFWPFPSLSYLASACLSNTVLR*KLWQLS
Trigger: AGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTT...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
3UTR-3UTR CCA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGCTCAGGTGGAAACTTTaGCAATTATCTGTGGTTAAA +
Preference number: 2 (lower is better)
Translates to: MFLALPLFVILGFSLFKLLRWKL*QLSVVK
Trigger: TTTAACCACAGATAATTGCCAAAGTTTCCACCTGAG...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
3UTR-3UTR CCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTAACACCGTCCTCAGGTaGAAACTTTGGCAATTATCT +
Preference number: 2 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGNTVLR*KLWQLS
Trigger: AGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTT...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
3UTR-3UTR GCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTTTTCGTCCATTCTTCTaGGTTGAGTCCACTGTAAAT +
Preference number: 2 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGFRPFF*VESTVN
Trigger: ATTTACAGTGGACTCAACGCAGAAGAATGGACGAAA...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
3UTR-3UTR CCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCCTCAGGTGGAAACTTTaGCAATTATCTGTGGTTAAA +
Preference number: 2 (lower is better)
Translates to: LCFWPFPSLSYLASACLSLRWKL*QLSVVK
Trigger: TTTAACCACAGATAATTGCCAAAGTTTCCACCTGAG...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
3UTR-3UTR CCA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTCTCAGGTGGAAACTTTaGCAATTATCTGTGGTTAAA +
Preference number: 2 (lower is better)
Translates to: RFSTMKCMYNATGLYIHILRWKL*QLSVVK
Trigger: TTTAACCACAGATAATTGCCAAAGTTTCCACCTGAG...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
3UTR CCA 72 bp ACCAAACTACCGATTCCTATCCTTAATCACGTTGGATaGTCATTTCGTCCATTCTTCTGCGTTGAGTCCACT +
Preference number: 3 (lower is better)
Translates to: TKLPIPILNHVG*SFRPFFCVEST
Trigger: AGTGGACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAGTTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
3UTR-3UTR CAA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATCTATCCTTAATCACGTaGGATGGTCATTTCGTCCAT +
Preference number: 3 (lower is better)
Translates to: FLALPLFVILGFSLFKLNLSLIT*DGHFVH
Trigger: ATGGACGAAATGACCATCCAACGTGATTAAGGATAG...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
3UTR TCA 72 bp CCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTaGATGAGTAGGCATTTAAGAAGGTTCAGCACTATG +
Preference number: 3 (lower is better)
Translates to: PSLSYLASACLS*MSRHLRRFSTM
Trigger: CATAGTGCTGAACCTTCTTAAATGCCTACTCATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
3UTR-3UTR CAA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTCTATCCTTAATCACGTaGGATGGTCATTTCGTCCAT +
Preference number: 3 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGLSLIT*DGHFVH
Trigger: ATGGACGAAATGACCATCCAACGTGATTAAGGATAG...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
3UTR-3UTR CAA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTCTATCCTTAATCACGTaGGATGGTCATTTCGTCCAT +
Preference number: 3 (lower is better)
Translates to: RFSTMKCMYNATGLYIHILSLIT*DGHFVH
Trigger: ATGGACGAAATGACCATCCAACGTGATTAAGGATAG...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCCTCGGCAGCGCCGGGTaGTGCGCTCGCATATGCGCC +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSLGSAG*CARICA
Trigger: GGCGCATATGCGAGCGCAGCACCCGGCGCTGCCGAG...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325319.9
CDS-3UTR TCA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATGAGCCTGGATCCTaGGGCGCGCCTGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: MFLALPLFVILGFSLFKLNEPGS*GAPGLE
Trigger: CTCCAAGCCAGGCGCGCCTCAGGATCCAGGCTCATT...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTCACTGGCCAGCAATGTaGACTGGGAGGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGHWPAM*TGRESG
Trigger: CCCAGACTCCCTCCCAGTGCACATTGCTGGCCAGTG...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGCCACGTAGCCCGGTTTaGAGGTGCAGCTGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWPRSPV*RCSCVP
Trigger: AGGGACACAGCTGCACCTGCAAACCGGGCTACGTGG...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTATCCTGAGGCGCGCCTaGCTTGGAGCCGCCAAACTT +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGILRRA*LGAAKL
Trigger: AAGTTTGGCGGCTCCAAGCCAGGCGCGCCTCAGGAT...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGCACTGGGAGGGAGTCTaGGGAGCAATTGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWHWEGV*GAIERG
Trigger: CCCCCTCTCAATTGCTCCCCAGACTCCCTCCCAGTG...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCAATGAGCCTGGATCCTaGGGCGCGCCTGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCNEPGS*GAPGLE
Trigger: CTCCAAGCCAGGCGCGCCTCAGGATCCAGGCTCATT...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGCTAGGTGGAAGCAAATaGGCCTGGATCCTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWLGGSK*AWILRR
Trigger: GCGCCTCAGGATCCAGGCTCATTTGCTTCCACCTAG...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGGGACTCCCCGGACAGTaGATAGGTCCCATCGTCATG +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWGLPGQ*IGPIVM
Trigger: CATGACGATGGGACCTATTCACTGTCCGGGGAGTCC...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGCTAGGCAGGGGTCACTaGCACAGCGGGGACAACATT +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWLGRGH*HSGDNI
Trigger: AATGTTGTCCCCGCTGTGTCAGTGACCCCTGCCTAG...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTCTAGGCAGGGGTCACTaGCACAGCGGGGACAACATT +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGLGRGH*HSGDNI
Trigger: AATGTTGTCCCCGCTGTGTCAGTGACCCCTGCCTAG...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGATCCTGAGGCGCGCCTaGCTTGGAGCCGCCAAACTT +
Preference number: 4 (lower is better)
Translates to: MFLALPLFVILGFSLFKLILRRA*LGAAKL
Trigger: AAGTTTGGCGGCTCCAAGCCAGGCGCGCCTCAGGAT...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTAATGAGCCTGGATCCTaGGGCGCGCCTGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSNEPGS*GAPGLE
Trigger: CTCCAAGCCAGGCGCGCCTCAGGATCCAGGCTCATT...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGCTAGGTGGAAGCAAATaGGCCTGGATCCTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: MFLALPLFVILGFSLFKLLGGSK*AWILRR
Trigger: GCGCCTCAGGATCCAGGCTCATTTGCTTCCACCTAG...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTTGCATTCCAGACACCTaGGCAACTCCAAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGCIPDT*ATPRVV
Trigger: CACCACCCTTGGAGTTGCTCAGGTGTCTGGAATGCA...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGCGCAGTGGCTTCCTGTaGATCCAGATGGACAGACAC +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWRSGFL*IQMDRH
Trigger: GTGTCTGTCCATCTGGATTCACAGGAAGCCACTGCG...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCAGCCCCCTGCCAGGTTaGTGCAGGCAGAATCGTTCC +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCSPLPG*CRQNRS
Trigger: GGAACGATTCTGCCTGCATCAACCTGGCAGGGGGCT...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTCATGCGGTAAGGAAGTaGCTCTGTCCTTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFHAVRK*LCPWLP
Trigger: GGGAAGCCAAGGACAGAGGCACTTCCTTACCGCATG...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGCATGCGGTAAGGAAGTaGCTCTGTCCTTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWHAVRK*LCPWLP
Trigger: GGGAAGCCAAGGACAGAGGCACTTCCTTACCGCATG...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATCACTGGCCAGCAATGTaGACTGGGAGGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNHWPAM*TGRESG
Trigger: CCCAGACTCCCTCCCAGTGCACATTGCTGGCCAGTG...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATCCACGTAGCCCGGTTTaGAGGTGCAGCTGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNPRSPV*RCSCVP
Trigger: AGGGACACAGCTGCACCTGCAAACCGGGCTACGTGG...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCATCCTGAGGCGCGCCTaGCTTGGAGCCGCCAAACTT +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCILRRA*LGAAKL
Trigger: AAGTTTGGCGGCTCCAAGCCAGGCGCGCCTCAGGAT...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGCACTGGGAGGGAGTCTaGGGAGCAATTGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAHWEGV*GAIERG
Trigger: CCCCCTCTCAATTGCTCCCCAGACTCCCTCCCAGTG...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGCCAGCAATGTGCACTaGGAGGGAGTCTGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCASNVH*EGVWGA
Trigger: TGCTCCCCAGACTCCCTCCCAGTGCACATTGCTGGC...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATGCCAGCAATGTGCACTaGGAGGGAGTCTGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNASNVH*EGVWGA
Trigger: TGCTCCCCAGACTCCCTCCCAGTGCACATTGCTGGC...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCGCCAGCAATGTGCACTaGGAGGGAGTCTGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSASNVH*EGVWGA
Trigger: TGCTCCCCAGACTCCCTCCCAGTGCACATTGCTGGC...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTGTTGGGGCAAGTGAGTaGCCAGCAATCTACCTCTCC +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGVGASE*PAIYLS
Trigger: GGAGAGGTAGATTGCTGGCCACTCACTTGCCCCAAC...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGGTGACGATATCCATCTaGAGGTCAGGGTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWVTISI*RSGSIP
Trigger: TGGGATGGACCCTGACCTTCAGATGGATATCGTCAC...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTGGACAGTATCACTCCTaGAGTGGATGGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGGQYHS*SGWLLL
Trigger: CAGCAGAAGCCATCCACTTCAGGAGTGATACTGTCC...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTGGCCAAGCCATAAATTaGTTCCTGGGGGAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGGQAIN*FLGEGW
Trigger: CCAACCTTCCCCCAGGAATCAATTTATGGCTTGGCC...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGGGCCAAGCCATAAATTaGTTCCTGGGGGAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWGQAIN*FLGEGW
Trigger: CCAACCTTCCCCCAGGAATCAATTTATGGCTTGGCC...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGGGACTCCCCGGACAGTaGATAGGTCCCATCGTCATG +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAGLPGQ*IGPIVM
Trigger: CATGACGATGGGACCTATTCACTGTCCGGGGAGTCC...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATGGACTCCCCGGACAGTaGATAGGTCCCATCGTCATG +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNGLPGQ*IGPIVM
Trigger: CATGACGATGGGACCTATTCACTGTCCGGGGAGTCC...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTAGACACCGACACTGCTaGCAGCTATGGGTCCAATTG +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGRHRHC*QLWVQL
Trigger: CAATTGGACCCATAGCTGTCAGCAGTGTCGGTGTCT...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTCAAGTTGGGGCAAGTaGGTGGCCAGCAATCTACCT +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWSSWGK*VASNLP
Trigger: AGGTAGATTGCTGGCCACTCACTTGCCCCAACTTGA...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCCTAGGCAGGGGTCACTaGCACAGCGGGGACAACATT +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSLGRGH*HSGDNI
Trigger: AATGTTGTCCCCGCTGTGTCAGTGACCCCTGCCTAG...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTGTGCCATTGTCCATCTaGCATGCGGTAAGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGVPLSI*HAVRKC
Trigger: GCACTTCCTTACCGCATGGCAGATGGACAATGGCAC...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGAGTTGTGCTGGCCGCTaGCACATTCATCGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWSCAGR*HIHRVL
Trigger: CAGAACACGATGAATGTGGCAGCGGCCAGCACAACT...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTCCACGTAGCCCGGTTTaGAGGTGCAGCTGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGPRSPV*RCSCVP
Trigger: AGGGACACAGCTGCACCTGCAAACCGGGCTACGTGG...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGCTTCACAGAAAGCTCTaGAGATGGTCCCGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWLHRKL*RWSRSP
Trigger: TGGGGAACGGGACCATCTGCAGAGCTTTCTGTGAAG...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTCATGGAAACCGCTTCTaGACTCACAGTGGTACCACC +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGHGNRF*THSGTT
Trigger: GGTGGTACCACTGTGAGTGCAGAAGCGGTTTCCATG...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTCCACTGTCCTGGCAGTaGACACACAGAACCACACAA +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGPLSWQ*THRTTQ
Trigger: TTGTGTGGTTCTGTGTGTGCACTGCCAGGACAGTGG...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCACCGAAGCTAGGTaGAAGCAAATGAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFGTEAR*KQMSLD
Trigger: ATCCAGGCTCATTTGCTTCCACCTAGCTTCGGTGCC...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTGGGAAGGTTGGTATCTaGAGGGTCTATCACACGCTC +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGGKVGI*RVYHTL
Trigger: GAGCGTGTGATAGACCCTCCAGATACCAACCTTCCC...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGGAAGGTTGGTATCTaGAGGGTCTATCACACGCTC +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFGKVGI*RVYHTL
Trigger: GAGCGTGTGATAGACCCTCCAGATACCAACCTTCCC...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGGGGAAGGTTGGTATCTaGAGGGTCTATCACACGCTC +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWGKVGI*RVYHTL
Trigger: GAGCGTGTGATAGACCCTCCAGATACCAACCTTCCC...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATAGCCCACCACTGTCCTaGCAGTGCACACACAGAACC +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNSPPLS*QCTHRT
Trigger: GGTTCTGTGTGTGCACTGCCAGGACAGTGGTGGGCT...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATTGCATTCCAGACACCTaGGCAACTCCAAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNCIPDT*ATPRVV
Trigger: CACCACCCTTGGAGTTGCTCAGGTGTCTGGAATGCA...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTGCATTCCAGACACCTaGGCAACTCCAAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSACIPDT*ATPRVV
Trigger: CACCACCCTTGGAGTTGCTCAGGTGTCTGGAATGCA...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGGGACAGTATCACTCCTaGAGTGGATGGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: MFLALPLFVILGFSLFKLGQYHS*SGWLLL
Trigger: CAGCAGAAGCCATCCACTTCAGGAGTGATACTGTCC...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGACATGGAGCAGGAGATaGGAGGCGCTAACTGACAGT +
Preference number: 4 (lower is better)
Translates to: MFLALPLFVILGFSLFKLTWSRR*EALTDS
Trigger: ACTGTCAGTTAGCGCCTCTCATCTCCTGCTCCATGT...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGCATCCCTCAGGCCACTaGTCTCCAGTTCAAAATAGC +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWHPSGH*SPVQNS
Trigger: GCTATTTTGAACTGGAGAGCAGTGGCCTGAGGGATG...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTGACAGTGCAACCTTGTaGCATTGTCCATCTGCCATG +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGDSATL*HCPSAM
Trigger: CATGGCAGATGGACAATGGCACAAGGTTGCACTGTC...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGACAGTGCAACCTTGTaGCATTGTCCATCTGCCATG +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFDSATL*HCPSAM
Trigger: CATGGCAGATGGACAATGGCACAAGGTTGCACTGTC...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTGCAAGTGCAGTTCCTaGAATGGTCACCATCTACCC +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWCKCSS*NGHHLP
Trigger: GGGTAGATGGTGACCATTGCAGGAACTGCACTTGCA...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTTTCTCATCACAGTTGTaGTGGCCGCTGCCACATTCA +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFFSSQL*WPLPHS
Trigger: TGAATGTGGCAGCGGCCAGCACAACTGTGATGAGAA...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTTCTCATCACAGTTGTaGTGGCCGCTGCCACATTCA +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWFSSQL*WPLPHS
Trigger: TGAATGTGGCAGCGGCCAGCACAACTGTGATGAGAA...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTACGTTCCACCGTATCTaGAGCCCTCTTCACAGAAAG +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGTFHRI*SPLHRK
Trigger: CTTTCTGTGAAGAGGGCTGCAGATACGGTGGAACGT...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTACGTTCCACCGTATCTaGAGCCCTCTTCACAGAAAG +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFTFHRI*SPLHRK
Trigger: CTTTCTGTGAAGAGGGCTGCAGATACGGTGGAACGT...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTGTCGGCAGAATATCTTaGCATCCTTGCAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGVGRIS*HPCRSR
Trigger: TCTGCTCCTGCAAGGATGGCAAGATATTCTGCCGAC...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTTGCATTTACAGGTTGTaGAGGGAGATCCAGCCATCG +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGCIYRL*REIQPS
Trigger: CGATGGCTGGATCTCCCTGCACAACCTGTAAATGCA...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTGAGCAACTCCAAGGGTaGTGTTCACAAGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGEQLQG*CSQGQA
Trigger: AGCTTGACCTTGTGAACACCACCCTTGGAGTTGCTC...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGTCATCACAGTTGTGCTaGCCGCTGCCACATTCATCG +
Preference number: 4 (lower is better)
Translates to: MFLALPLFVILGFSLFKLSSQLC*PLPHSS
Trigger: CGATGAATGTGGCAGCGGCCAGCACAACTGTGATGA...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGTCCCTGGACAGTGTTaGTGCAGATGGCATTCTCAT +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFVPGQC*CRWHSH
Trigger: ATGAGAATGCCATCTGCACCAACACTGTCCAGGGAC...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGGTGCAGCTGTGTCCCTaGACAGTGTTGGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAVQLCP*TVLVQM
Trigger: CATCTGCACCAACACTGTCCAGGGACACAGCTGCAC...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCAGAAAGCTCTGCAGATaGTCCCGTTCCCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSRKLCR*SRSPRS
Trigger: GCTACGTGGGGAACGGGACCATCTGCAGAGCTTTCT...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGACAGACACATTTGTTaGGAGCCACACACGTTCCAC +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFDRHIC*EPHTFH
Trigger: GTGGAACGTGTGTGGCTCCCAACAAATGTGTCTGTC...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTGACAGACACATTTGTTaGGAGCCACACACGTTCCAC +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGDRHIC*EPHTFH
Trigger: GTGGAACGTGTGTGGCTCCCAACAAATGTGTCTGTC...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTCAGCGGGAATGGTTGTaGCACTCAATGATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFQREWL*HSMIPS
Trigger: AGAGGGAATCATTGAGTGCCACAACCATTCCCGCTG...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTCAGCGGGAATGGTTGTaGCACTCAATGATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGQREWL*HSMIPS
Trigger: AGAGGGAATCATTGAGTGCCACAACCATTCCCGCTG...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGCAGCGGGAATGGTTGTaGCACTCAATGATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWQREWL*HSMIPS
Trigger: AGAGGGAATCATTGAGTGCCACAACCATTCCCGCTG...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTTCAAGGTCCACACCTaGCCATTGTGCTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSFKVHT*PLCFSP
Trigger: GGGGCTGAAGCACAATGGCCAGGTGTGGACCTTGAA...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGGTTGGGGCAAGTGAGTaGCCAGCAATCTACCTCTCC +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAVGASE*PAIYLS
Trigger: GGAGAGGTAGATTGCTGGCCACTCACTTGCCCCAAC...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTAGCCCACCACTGTCCTaGCAGTGCACACACAGAACC +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSSPPLS*QCTHRT
Trigger: GGTTCTGTGTGTGCACTGCCAGGACAGTGGTGGGCT...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGCAAGGTCAAGCTCGGTaGCGATATCCATCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: MFLALPLFVILGFSLFKLQGQAR*RYPSEG
Trigger: ACCTTCAGATGGATATCGTCACCGAGCTTGACCTTG...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGCAGTGGCCAAAATGGTaGATTCACTCTTGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWQWPKW*IHSCSG
Trigger: TCCGGAACAAGAGTGAATTCACCATTTTGGCCACTG...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGGGACAGTATCACTCCTaGAGTGGATGGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAGQYHS*SGWLLL
Trigger: CAGCAGAAGCCATCCACTTCAGGAGTGATACTGTCC...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCATGAGAGGCGCTAACTaGCAGTGCAACCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSMRGAN*QCNLVP
Trigger: TGGCACAAGGTTGCACTGTCAGTTAGCGCCTCTCAT...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR TCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTCGCAGTGGCTTCCTGTaGATCCAGATGGACAGACAC +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGRSGFL*IQMDRH
Trigger: GTGTCTGTCCATCTGGATTCACAGGAAGCCACTGCG...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGAGACACCGACACTGCTaGCAGCTATGGGTCCAATTG +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSARHRHC*QLWVQL
Trigger: CAATTGGACCCATAGCTGTCAGCAGTGTCGGTGTCT...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCAGACACCGACACTGCTaGCAGCTATGGGTCCAATTG +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSRHRHC*QLWVQL
Trigger: CAATTGGACCCATAGCTGTCAGCAGTGTCGGTGTCT...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTCAAGTTGGGGCAAGTaGGTGGCCAGCAATCTACCT +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSASSWGK*VASNLP
Trigger: AGGTAGATTGCTGGCCACTCACTTGCCCCAACTTGA...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATTCAAGTTGGGGCAAGTaGGTGGCCAGCAATCTACCT +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNSSWGK*VASNLP
Trigger: AGGTAGATTGCTGGCCACTCACTTGCCCCAACTTGA...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTGAAGTGGATGGCTTCTaGTGTACAGTGGCCAAAATG +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGEVDGF*CTVAKM
Trigger: CATTTTGGCCACTGTACAGCAGAAGCCATCCACTTC...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTCCTTTGAATAAGCCATaGTTTTGGTTGCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFPLNKP*FWLRWP
Trigger: TGGCCAGCGCAACCAAAAGCATGGCTTATTCAAAGG...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATAGTTGTGCTGGCCGCTaGCACATTCATCGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNSCAGR*HIHRVL
Trigger: CAGAACACGATGAATGTGGCAGCGGCCAGCACAACT...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCAGTTGTGCTGGCCGCTaGCACATTCATCGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSSCAGR*HIHRVL
Trigger: CAGAACACGATGAATGTGGCAGCGGCCAGCACAACT...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCCTTCACAGAAAGCTCTaGAGATGGTCCCGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCLHRKL*RWSRSP
Trigger: TGGGGAACGGGACCATCTGCAGAGCTTTCTGTGAAG...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGCATGGAAACCGCTTCTaGACTCACAGTGGTACCACC +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAHGNRF*THSGTT
Trigger: GGTGGTACCACTGTGAGTGCAGAAGCGGTTTCCATG...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTATATCTTGCCATCCTTaGAGGAGCAGACAGAACACC +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFISCHP*RSRQNT
Trigger: GGTGTTCTGTCTGCTCCTGCAAGGATGGCAAGATAT...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATCCACTGTCCTGGCAGTaGACACACAGAACCACACAA +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNPLSWQ*THRTTQ
Trigger: TTGTGTGGTTCTGTGTGTGCACTGCCAGGACAGTGG...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGGGCACCGAAGCTAGGTaGAAGCAAATGAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAGTEAR*KQMSLD
Trigger: ATCCAGGCTCATTTGCTTCCACCTAGCTTCGGTGCC...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTGCTCCAGTTCTCGAATaGACAGTATCACTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGAPVLE*TVSLLK
Trigger: CTTCAGGAGTGATACTGTCCATTCGAGAACTGGAGC...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTAATAAGCCATGCTTTTaGTTGCGCTGGCCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGNKPCF*LRWPSH
Trigger: ATGGCTTGGCCAGCGCAACCAAAAGCATGGCTTATT...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGGTGCAGTTCCTGCAATaGTCACCATCTACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: MFLALPLFVILGFSLFKLVQFLQ*SPSTQE
Trigger: CTCTTGGGTAGATGGTGACCATTGCAGGAACTGCAC...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTATTCCCGACAGCTCTTaGTTAAAATCCGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGIPDSS*LKSAGL
Trigger: AAGGCCAGCGGATTTTAACCAAGAGCTGTCGGGAAT...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGCACACGAATGTATCCTaGGACACAGTCACAGCGATA +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWHTNVS*DTVTAI
Trigger: TATCGCTGTGACTGTGTCCCAGGATACATTCGTGTG...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTGTGCAGCTGTGTCCCTaGACAGTGTTGGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSVQLCP*TVLVQM
Trigger: CATCTGCACCAACACTGTCCAGGGACACAGCTGCAC...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTAGAAAGCTCTGCAGATaGTCCCGTTCCCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSRKLCR*SRSPRS
Trigger: GCTACGTGGGGAACGGGACCATCTGCAGAGCTTTCT...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTAGAAAGCTCTGCAGATaGTCCCGTTCCCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGRKLCR*SRSPRS
Trigger: GCTACGTGGGGAACGGGACCATCTGCAGAGCTTTCT...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTTTCAAGGTCCACACCTaGCCATTGTGCTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSFKVHT*PLCFSP
Trigger: GGGGCTGAAGCACAATGGCCAGGTGTGGACCTTGAA...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTTCAGCACTTGGATTCTaGCAATCACAAGCTGTCCGT +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFSALGF*QSQAVR
Trigger: ACGGACAGCTTGTGATTGCCAGAATCCAAGTGCTGA...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTGTGACGATATCCATCTaGAGGTCAGGGTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSVTISI*RSGSIP
Trigger: TGGGATGGACCCTGACCTTCAGATGGATATCGTCAC...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTGTGACGATATCCATCTaGAGGTCAGGGTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGVTISI*RSGSIP
Trigger: TGGGATGGACCCTGACCTTCAGATGGATATCGTCAC...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCCAAGGTCAAGCTCGGTaGCGATATCCATCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCQGQAR*RYPSEG
Trigger: ACCTTCAGATGGATATCGTCACCGAGCTTGACCTTG...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCCAAGGTCAAGCTCGGTaGCGATATCCATCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSQGQAR*RYPSEG
Trigger: ACCTTCAGATGGATATCGTCACCGAGCTTGACCTTG...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGAATTTCTCACTCACATaGGGAGCTGCATGGATCTCT +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWNFSLT*GAAWIS
Trigger: AGAGATCCATGCAGCTCCTCATGTGAGTGAGAAATT...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTACATGGAGCAGGAGATaGGAGGCGCTAACTGACAGT +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSTWSRR*EALTDS
Trigger: ACTGTCAGTTAGCGCCTCTCATCTCCTGCTCCATGT...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR TCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTGGCCAAGCCATAAATTaGTTCCTGGGGGAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGGQAIN*FLGEGW
Trigger: CCAACCTTCCCCCAGGAATCAATTTATGGCTTGGCC...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTCAGGTTGGGCAAGTGTaGTTTAGATTTGGACACTGT +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFQVGQV*FRFGHC
Trigger: ACAGTGTCCAAATCTAAATCACACTTGCCCAACCTG...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTCTGCTGTCCTGGCAGTaGACACACAGAACCACACAA +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSLLSWQ*THRTTQ
Trigger: TTGTGTGGTTCTGTGTGTGCACTGCCAGGACAGCAG...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298925.9
CDS-3UTR GCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATTGGCTTCATATCTTCTaGTGTCCTGGCAGTGCACAC +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNWLHIF*CPGSAH
Trigger: GTGTGCACTGCCAGGACAGCAGAAGATATGAAGCCA...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298925.9
CDS-3UTR GCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTGTGCCATTGTCCATCTaGCATGCGGTAAGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSVPLSI*HAVRKC
Trigger: GCACTTCCTTACCGCATGGCAGATGGACAATGGCAC...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGGGCTTAAGAAATCACTaGAGGTTGGGCAAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWGLRNH*RLGKCD
Trigger: ATCACACTTGCCCAACCTGCAGTGATTTCTTAAGCC...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTGGCTTAAGAAATCACTaGAGGTTGGGCAAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGGLRNH*RLGKCD
Trigger: ATCACACTTGCCCAACCTGCAGTGATTTCTTAAGCC...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTGCAAGTGCAGTTCCTaGAATGGTCACCATCTACCC +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSACKCSS*NGHHLP
Trigger: GGGTAGATGGTGACCATTGCAGGAACTGCACTTGCA...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTAATCCGCTGGCCTTCTaGAAGAACTTTTCCTCCATA +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFNPLAF*KNFSSI
Trigger: TATGGAGGAAAAGTTCTTGCAGAAGGCCAGCGGATT...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCCCTGGACAGTGTTGGTaGAGATGGCATTCTCATCAC +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSPGQCW*RWHSHH
Trigger: GTGATGAGAATGCCATCTGCACCAACACTGTCCAGG...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTCATGGAAACCGCTTCTaGACTCACAGTGGTACCACC +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGHGNRF*THSGTT
Trigger: GGTGGTACCACTGTGAGTGCAGAAGCGGTTTCCATG...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGGTCGGCAGAATATCTTaGCATCCTTGCAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAVGRIS*HPCRSR
Trigger: TCTGCTCCTGCAAGGATGGCAAGATATTCTGCCGAC...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTATCTTCTGCTGTCCTaGCAGTGCACACACAGAACC +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAYLLLS*QCTHRT
Trigger: GGTTCTGTGTGTGCACTGCCAGGACAGCAGAAGATA...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298925.9
CDS-3UTR CCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATGAGCAACTCCAAGGGTaGTGTTCACAAGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNEQLQG*CSQGQA
Trigger: AGCTTGACCTTGTGAACACCACCCTTGGAGTTGCTC...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTCCTGGGGGAAGGTTaGTATCTGGAGGGTCTATCA +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAFLGEG*YLEGLS
Trigger: TGATAGACCCTCCAGATACCAACCTTCCCCCAGGAA...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCTTCCTGGGGGAAGGTTaGTATCTGGAGGGTCTATCA +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCFLGEG*YLEGLS
Trigger: TGATAGACCCTCCAGATACCAACCTTCCCCCAGGAA...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATTTCCTGGGGGAAGGTTaGTATCTGGAGGGTCTATCA +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNFLGEG*YLEGLS
Trigger: TGATAGACCCTCCAGATACCAACCTTCCCCCAGGAA...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCGTGCAGTTCCTGCAATaGTCACCATCTACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSVQFLQ*SPSTQE
Trigger: CTCTTGGGTAGATGGTGACCATTGCAGGAACTGCAC...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTGCAGTTCCTGCAATaGTCACCATCTACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCVQFLQ*SPSTQE
Trigger: CTCTTGGGTAGATGGTGACCATTGCAGGAACTGCAC...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTTCATCACAGTTGTGCTaGCCGCTGCCACATTCATCG +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSSSQLC*PLPHSS
Trigger: CGATGAATGTGGCAGCGGCCAGCACAACTGTGATGA...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGGTCCCTGGACAGTGTTaGTGCAGATGGCATTCTCAT +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAVPGQC*CRWHSH
Trigger: ATGAGAATGCCATCTGCACCAACACTGTCCAGGGAC...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGACAGACACATTTGTTaGGAGCCACACACGTTCCAC +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCDRHIC*EPHTFH
Trigger: GTGGAACGTGTGTGGCTCCCAACAAATGTGTCTGTC...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCTCTGCACAAAAGTTATaGCCTCTACAGACACGGCAG +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCSAQKL*PLQTRQ
Trigger: CTGCCGTGTCTGTAGAGGTCATAACTTTTGTGCAGA...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTCTGCACAAAAGTTATaGCCTCTACAGACACGGCAG +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSASAQKL*PLQTRQ
Trigger: CTGCCGTGTCTGTAGAGGTCATAACTTTTGTGCAGA...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTCTGCACAAAAGTTATaGCCTCTACAGACACGGCAG +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSSAQKL*PLQTRQ
Trigger: CTGCCGTGTCTGTAGAGGTCATAACTTTTGTGCAGA...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGATAACCCAGGAAGGTTaGCACACACAGTATTGGCAT +
Preference number: 4 (lower is better)
Translates to: MFLALPLFVILGFSLFKLITQEG*HTQYWH
Trigger: ATGCCAATACTGTGTGTGTCAACCTTCCTGGGTTAT...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGGGTTGTGGCACTCAATaGTTCCCTCTGAACATTCAT +
Preference number: 4 (lower is better)
Translates to: MFLALPLFVILGFSLFKLGCGTQ*FPLNIH
Trigger: ATGAATGTTCAGAGGGAATCATTGAGTGCCACAACC...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTCTAAACATTGACTTGTaGCTCTGGTGTCACATTCTG +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGLNIDL*LWCHIL
Trigger: CAGAATGTGACACCAGAGTCACAAGTCAATGTTTAG...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTACTCACATGAGGAGCTaGATGGATCTCTCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFTHMRS*MDLSFY
Trigger: ATAGAAAGAGAGATCCATGCAGCTCCTCATGTGAGT...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTCATCCCTCAGGCCACTaGTCTCCAGTTCAAAATAGC +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSHPSGH*SPVQNS
Trigger: GCTATTTTGAACTGGAGAGCAGTGGCCTGAGGGATG...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR GCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCCACCACTTTTGCAAGTaGAGTTCCTGCAATGGTCAC +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCHHFCK*SSCNGH
Trigger: GTGACCATTGCAGGAACTGCACTTGCAAAAGTGGTG...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATCCGCTGGCCTTCTaGAAGAACTTTTCCTCCATA +
Preference number: 4 (lower is better)
Translates to: MFLALPLFVILGFSLFKLNPLAF*KNFSSI
Trigger: TATGGAGGAAAAGTTCTTGCAGAAGGCCAGCGGATT...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTTTCTCATCACAGTTGTaGTGGCCGCTGCCACATTCA +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSFSSQL*WPLPHS
Trigger: TGAATGTGGCAGCGGCCAGCACAACTGTGATGAGAA...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTCCTGGACAGTGTTGGTaGAGATGGCATTCTCATCAC +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGPGQCW*RWHSHH
Trigger: GTGATGAGAATGCCATCTGCACCAACACTGTCCAGG...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTCCTGGACAGTGTTGGTaGAGATGGCATTCTCATCAC +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSPGQCW*RWHSHH
Trigger: GTGATGAGAATGCCATCTGCACCAACACTGTCCAGG...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTACGTTCCACCGTATCTaGAGCCCTCTTCACAGAAAG +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSTFHRI*SPLHRK
Trigger: CTTTCTGTGAAGAGGGCTGCAGATACGGTGGAACGT...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCATATCTTGCCATCCTTaGAGGAGCAGACAGAACACC +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSISCHP*RSRQNT
Trigger: GGTGTTCTGTCTGCTCCTGCAAGGATGGCAAGATAT...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTGTCGGCAGAATATCTTaGCATCCTTGCAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGVGRIS*HPCRSR
Trigger: TCTGCTCCTGCAAGGATGGCAAGATATTCTGCCGAC...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTTGCATTTACAGGTTGTaGAGGGAGATCCAGCCATCG +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSCIYRL*REIQPS
Trigger: CGATGGCTGGATCTCCCTGCACAACCTGTAAATGCA...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTGAGCAACTCCAAGGGTaGTGTTCACAAGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSEQLQG*CSQGQA
Trigger: AGCTTGACCTTGTGAACACCACCCTTGGAGTTGCTC...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGGTATCACTCCTGAAGTaGATGGCTTCTGCTGTACAG +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAVSLLK*MASAVQ
Trigger: CTGTACAGCAGAAGCCATCCACTTCAGGAGTGATAC...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCGTATCACTCCTGAAGTaGATGGCTTCTGCTGTACAG +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSVSLLK*MASAVQ
Trigger: CTGTACAGCAGAAGCCATCCACTTCAGGAGTGATAC...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGGCTCCAGTTCTCGAATaGACAGTATCACTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAAPVLE*TVSLLK
Trigger: CTTCAGGAGTGATACTGTCCATTCGAGAACTGGAGC...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTTGCTTTTGGTTGCGCTaGCCAAGCCATAAATTGATT +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFCFWLR*PSHKLI
Trigger: AATCAATTTATGGCTTGGCCAGCGCAACCAAAAGCA...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCAATAAGCCATGCTTTTaGTTGCGCTGGCCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCNKPCF*LRWPSH
Trigger: ATGGCTTGGCCAGCGCAACCAAAAGCATGGCTTATT...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCATTCCCGACAGCTCTTaGTTAAAATCCGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSIPDSS*LKSAGL
Trigger: AAGGCCAGCGGATTTTAACCAAGAGCTGTCGGGAAT...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGATTCCCGACAGCTCTTaGTTAAAATCCGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAIPDSS*LKSAGL
Trigger: AAGGCCAGCGGATTTTAACCAAGAGCTGTCGGGAAT...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGATATCTTTCTCGCAGTaGCTTCCTGTGAATCCAGAT +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWISFSQ*LPVNPD
Trigger: ATCTGGATTCACAGGAAGCCACTGCGAGAAAGATAT...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTAACACCGTCCTCAGGTaGAAACTTTGGCAATTATCT +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGNTVLR*KLWQLS
Trigger: AGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTT...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATAATTTCTCACTCACATaGGGAGCTGCATGGATCTCT +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNNFSLT*GAAWIS
Trigger: AGAGATCCATGCAGCTCCTCATGTGAGTGAGAAATT...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTTGTTCCGGAACAGCTaGATTAATTTCTCACTCACA +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWLFRNS*INFSLT
Trigger: TGTGAGTGAGAAATTAATTCAGCTGTTCCGGAACAA...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTCAGTGGCCAAAATGGTaGATTCACTCTTGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSQWPKW*IHSCSG
Trigger: TCCGGAACAAGAGTGAATTCACCATTTTGGCCACTG...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCCAGGTTGGGCAAGTGTaGTTTAGATTTGGACACTGT +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCQVGQV*FRFGHC
Trigger: ACAGTGTCCAAATCTAAATCACACTTGCCCAACCTG...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATCAGGTTGGGCAAGTGTaGTTTAGATTTGGACACTGT +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNQVGQV*FRFGHC
Trigger: ACAGTGTCCAAATCTAAATCACACTTGCCCAACCTG...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATATAACCCAGGAAGGTTaGCACACACAGTATTGGCAT +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNITQEG*HTQYWH
Trigger: ATGCCAATACTGTGTGTGTCAACCTTCCTGGGTTAT...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGGGTTGTGGCACTCAATaGTTCCCTCTGAACATTCAT +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAGCGTQ*FPLNIH
Trigger: ATGAATGTTCAGAGGGAATCATTGAGTGCCACAACC...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATTCGTTCCAACAGGTGTaGGTTCTTAAGGCACATTCA +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNSFQQV*VLKAHS
Trigger: TGAATGTGCCTTAAGAACTCACACCTGTTGGAACGA...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTTTTGGTCTAAACATTaGCTTGTGACTCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWFWSKH*LVTLVS
Trigger: TGACACCAGAGTCACAAGTCAATGTTTAGACCAAAA...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGTCCATTCTTCTGCGTTaGGTCCACTGTAAATACTTC +
Preference number: 4 (lower is better)
Translates to: MFLALPLFVILGFSLFKLSILLR*VHCKYF
Trigger: GAAGTATTTACAGTGGACTCAACGCAGAAGAATGGA...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTGAAGTGGATGGCTTCTaGTGTACAGTGGCCAAAATG +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGEVDGF*CTVAKM
Trigger: CATTTTGGCCACTGTACAGCAGAAGCCATCCACTTC...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTCCTTTGAATAAGCCATaGTTTTGGTTGCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSPLNKP*FWLRWP
Trigger: TGGCCAGCGCAACCAAAAGCATGGCTTATTCAAAGG...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATGGCTTAAGAAATCACTaGAGGTTGGGCAAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNGLRNH*RLGKCD
Trigger: ATCACACTTGCCCAACCTGCAGTGATTTCTTAAGCC...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTCACCACTTTTGCAAGTaGAGTTCCTGCAATGGTCAC +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGHHFCK*SSCNGH
Trigger: GTGACCATTGCAGGAACTGCACTTGCAAAAGTGGTG...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTATATCTTGCCATCCTTaGAGGAGCAGACAGAACACC +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGISCHP*RSRQNT
Trigger: GGTGTTCTGTCTGCTCCTGCAAGGATGGCAAGATAT...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTGTATCACTCCTGAAGTaGATGGCTTCTGCTGTACAG +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGVSLLK*MASAVQ
Trigger: CTGTACAGCAGAAGCCATCCACTTCAGGAGTGATAC...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTGCTCCAGTTCTCGAATaGACAGTATCACTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGAPVLE*TVSLLK
Trigger: CTTCAGGAGTGATACTGTCCATTCGAGAACTGGAGC...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATAAGTGCCTCTGTCCTTaGCTTCCCATTGTGTATGTA +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNKCLCP*LPIVYV
Trigger: TACATACACAATGGGAAGCCAAGGACAGAGGCACTT...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR CCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCAAGTGCCTCTGTCCTTaGCTTCCCATTGTGTATGTA +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCKCLCP*LPIVYV
Trigger: TACATACACAATGGGAAGCCAAGGACAGAGGCACTT...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTTTGGTTAAAATCCGCTaGCCTTCTGCAAGAACTTTT +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFLVKIR*PSARTF
Trigger: AAAAGTTCTTGCAGAAGGCCAGCGGATTTTAACCAA...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTTTGGTTAAAATCCGCTaGCCTTCTGCAAGAACTTTT +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGLVKIR*PSARTF
Trigger: AAAAGTTCTTGCAGAAGGCCAGCGGATTTTAACCAA...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTCACACGAATGTATCCTaGGACACAGTCACAGCGATA +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSHTNVS*DTVTAI
Trigger: TATCGCTGTGACTGTGTCCCAGGATACATTCGTGTG...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATTCCTGTGAATCCAGATaGACAGACACATTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNSCESR*TDTFVG
Trigger: CCCAACAAATGTGTCTGTCCATCTGGATTCACAGGA...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATTTAACGCAGCGGGAATaGTTGTGGCACTCAATGATT +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNLTQRE*LWHSMI
Trigger: AATCATTGAGTGCCACAACCATTCCCGCTGCGTTAA...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTTCAGCACTTGGATTCTaGCAATCACAAGCTGTCCGT +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGSALGF*QSQAVR
Trigger: ACGGACAGCTTGTGATTGCCAGAATCCAAGTGCTGA...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTTCAGCACTTGGATTCTaGCAATCACAAGCTGTCCGT +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSSALGF*QSQAVR
Trigger: ACGGACAGCTTGTGATTGCCAGAATCCAAGTGCTGA...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTCTTAATCACGTTGGATaGTCATTTCGTCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGLNHVG*SFRPFF
Trigger: GAAGAATGGACGAAATGACCATCCAACGTGATTAAG...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTCGCAGTGGCTTCCTGTaGATCCAGATGGACAGACAC +
Preference number: 4 (lower is better)
Translates to: RFSTMKCMYNATGLYIHIRSGFL*IQMDRH
Trigger: GTGTCTGTCCATCTGGATTCACAGGAAGCCACTGCG...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTGGTTGTGGCACTCAATaGTTCCCTCTGAACATTCAT +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSGCGTQ*FPLNIH
Trigger: ATGAATGTTCAGAGGGAATCATTGAGTGCCACAACC...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTTCGTTCCAACAGGTGTaGGTTCTTAAGGCACATTCA +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGSFQQV*VLKAHS
Trigger: TGAATGTGCCTTAAGAACTCACACCTGTTGGAACGA...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCCTAAACATTGACTTGTaGCTCTGGTGTCACATTCTG +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSLNIDL*LWCHIL
Trigger: CAGAATGTGACACCAGAGTCACAAGTCAATGTTTAG...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCTCCATTCTTCTGCGTTaGGTCCACTGTAAATACTTC +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCSILLR*VHCKYF
Trigger: GAAGTATTTACAGTGGACTCAACGCAGAAGAATGGA...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGGAAGGTTCAGCACTATaGAATGTATGTATAATGCGA +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWEGSAL*NVCIMR
Trigger: TCGCATTATACATACATTTCATAGTGCTGAACCTTC...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTGAAGGTTCAGCACTATaGAATGTATGTATAATGCGA +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGEGSAL*NVCIMR
Trigger: TCGCATTATACATACATTTCATAGTGCTGAACCTTC...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCACTCACATGAGGAGCTaGATGGATCTCTCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSTHMRS*MDLSFY
Trigger: ATAGAAAGAGAGATCCATGCAGCTCCTCATGTGAGT...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCACTCACATGAGGAGCTaGATGGATCTCTCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCTHMRS*MDLSFY
Trigger: ATAGAAAGAGAGATCCATGCAGCTCCTCATGTGAGT...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTAATCCGCTGGCCTTCTaGAAGAACTTTTCCTCCATA +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGNPLAF*KNFSSI
Trigger: TATGGAGGAAAAGTTCTTGCAGAAGGCCAGCGGATT...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTTGTATTCCAGTTTTTaGACTCTGAGTTTTCACCAC +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWLYSSF*TLSFHH
Trigger: GTGGTGAAAACTCAGAGTGCAAAAACTGGAATACAA...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCTGCTTTTGGTTGCGCTaGCCAAGCCATAAATTGATT +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCCFWLR*PSHKLI
Trigger: AATCAATTTATGGCTTGGCCAGCGCAACCAAAAGCA...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTATGATCTTCCCATCTTaGATGATCCCTTTGAATAAG +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFMIFPS*MIPLNK
Trigger: CTTATTCAAAGGGATCATCCAAGATGGGAAGATCAT...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTGTTTTGCAGTCATCTTaGCCAAAAGCTCTTGTAAAT +
Preference number: 4 (lower is better)
Translates to: KATSKHRPQVETLAIICGVLQSS*PKALVN
Trigger: ATTTACAAGAGCTTTTGGCCAAGATGACTGCAAAAC...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCTCCATAGATACATTTTaGTCGGCAGACCTTACAGCA +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCSIDTF*SADLTA
Trigger: TGCTGTAAGGTCTGCCGACCAAAATGTATCTATGGA...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTCCATAGATACATTTTaGTCGGCAGACCTTACAGCA +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSSIDTF*SADLTA
Trigger: TGCTGTAAGGTCTGCCGACCAAAATGTATCTATGGA...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTGTGCAGCTGTGTCCCTaGACAGTGTTGGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: RFSTMKCMYNATGLYIHIVQLCP*TVLVQM
Trigger: CATCTGCACCAACACTGTCCAGGGACACAGCTGCAC...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTTCCTGTGAATCCAGATaGACAGACACATTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGSCESR*TDTFVG
Trigger: CCCAACAAATGTGTCTGTCCATCTGGATTCACAGGA...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGATATCTTTCTCGCAGTaGCTTCCTGTGAATCCAGAT +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAISFSQ*LPVNPD
Trigger: ATCTGGATTCACAGGAAGCCACTGCGAGAAAGATAT...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATATATCTTTCTCGCAGTaGCTTCCTGTGAATCCAGAT +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNISFSQ*LPVNPD
Trigger: ATCTGGATTCACAGGAAGCCACTGCGAGAAAGATAT...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTTTAACGCAGCGGGAATaGTTGTGGCACTCAATGATT +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSLTQRE*LWHSMI
Trigger: AATCATTGAGTGCCACAACCATTCCCGCTGCGTTAA...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTTTCAAGGTCCACACCTaGCCATTGTGCTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RFSTMKCMYNATGLYIHIFKVHT*PLCFSP
Trigger: GGGGCTGAAGCACAATGGCCAGGTGTGGACCTTGAA...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTCTCAGGTGGAAACTTTaGCAATTATCTGTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFLRWKL*QLSVVK
Trigger: TTTAACCACAGATAATTGCCAAAGTTTCCACCTGAG...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGCTCAGGTGGAAACTTTaGCAATTATCTGTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWLRWKL*QLSVVK
Trigger: TTTAACCACAGATAATTGCCAAAGTTTCCACCTGAG...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATAACACCGTCCTCAGGTaGAAACTTTGGCAATTATCT +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNNTVLR*KLWQLS
Trigger: AGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTT...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCTTGTTCCGGAACAGCTaGATTAATTTCTCACTCACA +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCLFRNS*INFSLT
Trigger: TGTGAGTGAGAAATTAATTCAGCTGTTCCGGAACAA...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTATGAGAGGCGCTAACTaGCAGTGCAACCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: RFSTMKCMYNATGLYIHIMRGAN*QCNLVP
Trigger: TGGCACAAGGTTGCACTGTCAGTTAGCGCCTCTCAT...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTTTTGGTCTAAACATTaGCTTGTGACTCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSFWSKH*LVTLVS
Trigger: TGACACCAGAGTCACAAGTCAATGTTTAGACCAAAA...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATCTTCGATACAGCTTGTaGCCATTTTGGTCTAAACAT +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNLRYSL*PFWSKH
Trigger: ATGTTTAGACCAAAATGGTCACAAGCTGTATCGAAG...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTCTTTTAACAACCATTaGCTTAAATGCACGGCACTG +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSASFNNH*LKCTAL
Trigger: CAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAGA...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTAAATCCATTATTCCTTaGACCAGGCTTAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFKSIIP*TRLKKS
Trigger: TGATTTCTTAAGCCTGGTGCAAGGAATAATGGATTT...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGATGATCTTCCCATCTTaGATGATCCCTTTGAATAAG +
Preference number: 4 (lower is better)
Translates to: MFLALPLFVILGFSLFKLMIFPS*MIPLNK
Trigger: CTTATTCAAAGGGATCATCCAAGATGGGAAGATCAT...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTTCCATAGATACATTTTaGTCGGCAGACCTTACAGCA +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGSIDTF*SADLTA
Trigger: TGCTGTAAGGTCTGCCGACCAAAATGTATCTATGGA...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATTTGGTTAAAATCCGCTaGCCTTCTGCAAGAACTTTT +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNLVKIR*PSARTF
Trigger: AAAAGTTCTTGCAGAAGGCCAGCGGATTTTAACCAA...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCCTTAATCACGTTGGATaGTCATTTCGTCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSLNHVG*SFRPFF
Trigger: GAAGAATGGACGAAATGACCATCCAACGTGATTAAG...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATCTTAATCACGTTGGATaGTCATTTCGTCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNLNHVG*SFRPFF
Trigger: GAAGAATGGACGAAATGACCATCCAACGTGATTAAG...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTAACACCGTCCTCAGGTaGAAACTTTGGCAATTATCT +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSNTVLR*KLWQLS
Trigger: AGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTT...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTTTTTGGTCTAAACATTaGCTTGTGACTCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSFWSKH*LVTLVS
Trigger: TGACACCAGAGTCACAAGTCAATGTTTAGACCAAAA...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTCTTCGATACAGCTTGTaGCCATTTTGGTCTAAACAT +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGLRYSL*PFWSKH
Trigger: ATGTTTAGACCAAAATGGTCACAAGCTGTATCGAAG...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTTCTTTTAACAACCATTaGCTTAAATGCACGGCACTG +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGSFNNH*LKCTAL
Trigger: CAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAGA...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGGAAGGTTCAGCACTATaGAATGTATGTATAATGCGA +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAEGSAL*NVCIMR
Trigger: TCGCATTATACATACATTTCATAGTGCTGAACCTTC...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCACATTTAGGTCCTTCTaGACAAAAGTTATGACCTCT +
Preference number: 4 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCTFRSF*TKVMTS
Trigger: AGAGGTCATAACTTTTGTGCAGAAGGACCTAAATGT...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTTGCATTTACAGGTTGTaGAGGGAGATCCAGCCATCG +
Preference number: 4 (lower is better)
Translates to: RFSTMKCMYNATGLYIHICIYRL*REIQPS
Trigger: CGATGGCTGGATCTCCCTGCACAACCTGTAAATGCA...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATATAAAAATGCTTTGCTaGCATTGTGCATTCCAGACA +
Preference number: 4 (lower is better)
Translates to: FLALPLFVILGFSLFKLNIKMLC*HCAFQT
Trigger: TGTCTGGAATGCACAATGCCAGCAAAGCATTTTTAT...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCATAAAAATGCTTTGCTaGCATTGTGCATTCCAGACA +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSIKMLC*HCAFQT
Trigger: TGTCTGGAATGCACAATGCCAGCAAAGCATTTTTAT...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGGTTTTGCAGTCATCTTaGCCAAAAGCTCTTGTAAAT +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAVLQSS*PKALVN
Trigger: ATTTACAAGAGCTTTTGGCCAAGATGACTGCAAAAC...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTGAAGTGGATGGCTTCTaGTGTACAGTGGCCAAAATG +
Preference number: 4 (lower is better)
Translates to: RFSTMKCMYNATGLYIHIEVDGF*CTVAKM
Trigger: CATTTTGGCCACTGTACAGCAGAAGCCATCCACTTC...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCAAATCCATTATTCCTTaGACCAGGCTTAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: LCFWPFPSLSYLASACLSKSIIP*TRLKKS
Trigger: TGATTTCTTAAGCCTGGTGCAAGGAATAATGGATTT...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGAAATCCATTATTCCTTaGACCAGGCTTAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAKSIIP*TRLKKS
Trigger: TGATTTCTTAAGCCTGGTGCAAGGAATAATGGATTT...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTACATTTAGGTCCTTCTaGACAAAAGTTATGACCTCT +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSTFRSF*TKVMTS
Trigger: AGAGGTCATAACTTTTGTGCAGAAGGACCTAAATGT...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR GCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTTTGTATTCCAGTTTTTaGACTCTGAGTTTTCACCAC +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSLYSSF*TLSFHH
Trigger: GTGGTGAAAACTCAGAGTGCAAAAACTGGAATACAA...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTATAAAAATGCTTTGCTaGCATTGTGCATTCCAGACA +
Preference number: 4 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGIKMLC*HCAFQT
Trigger: TGTCTGGAATGCACAATGCCAGCAAAGCATTTTTAT...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTATGATCTTCCCATCTTaGATGATCCCTTTGAATAAG +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSMIFPS*MIPLNK
Trigger: CTTATTCAAAGGGATCATCCAAGATGGGAAGATCAT...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CCA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTGTTTTGCAGTCATCTTaGCCAAAAGCTCTTGTAAAT +
Preference number: 4 (lower is better)
Translates to: FLSLITLDGHFVHSSALSVLQSS*PKALVN
Trigger: ATTTACAAGAGCTTTTGGCCAAGATGACTGCAAAAC...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTAATTTCTCACTCACATaGGGAGCTGCATGGATCTCT +
Preference number: 4 (lower is better)
Translates to: RFSTMKCMYNATGLYIHINFSLT*GAAWIS
Trigger: AGAGATCCATGCAGCTCCTCATGTGAGTGAGAAATT...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTCTAAACATTGACTTGTaGCTCTGGTGTCACATTCTG +
Preference number: 4 (lower is better)
Translates to: RFSTMKCMYNATGLYIHILNIDL*LWCHIL
Trigger: CAGAATGTGACACCAGAGTCACAAGTCAATGTTTAG...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTTCCATTCTTCTGCGTTaGGTCCACTGTAAATACTTC +
Preference number: 4 (lower is better)
Translates to: RFSTMKCMYNATGLYIHISILLR*VHCKYF
Trigger: GAAGTATTTACAGTGGACTCAACGCAGAAGAATGGA...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTCTTCGATACAGCTTGTaGCCATTTTGGTCTAAACAT +
Preference number: 4 (lower is better)
Translates to: RFSTMKCMYNATGLYIHILRYSL*PFWSKH
Trigger: ATGTTTAGACCAAAATGGTCACAAGCTGTATCGAAG...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR TCA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTTCTTTTAACAACCATTaGCTTAAATGCACGGCACTG +
Preference number: 4 (lower is better)
Translates to: RFSTMKCMYNATGLYIHISFNNH*LKCTAL
Trigger: CAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAGA...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS CCA 90 bp GCCTGGCTTGGAGCCGCCAAACTTGCTAGCGGGCGGCGGGGGAGGTaGCTCGGCAGCGCCGGGTGCTGCGCTCGCATATGCGCCCGGGAA +
Preference number: 5 (lower is better)
Translates to: AWLGAAKLASGRRGR*LGSAGCCARICARE
Trigger: TTCCCGGGCGCATATGCGAGCGCAGCACCCGGCGCTGCCGAGCCACCTCCCCCGCCGCCCGCTAGCAAGTTTGGCGGCTCCAAGCCAGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325319.9
CDS CCA 90 bp ATCGCTCTCGAGGGTCCCCGCCTAGCAGGGGGCACCGAAGCTAGGTaGAAGCAAATGAGCCTGGATCCTGAGGCGCGCCTGGCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: IALEGPRLAGGTEAR*KQMSLDPEARLAWS
Trigger: GCTCCAAGCCAGGCGCGCCTCAGGATCCAGGCTCATTTGCTTCCACCTAGCTTCGGTGCCCCCTGCTAGGCGGGGACCCTCGAGAGCGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS GCA 90 bp CACAGAAAGCTCTGCAGATGGTCCCGTTCCCCACGTAGCCCGGTTTaGAGGTGCAGCTGTGTCCCTGGACAGTGTTGGTGCAGATGGCAT +
Preference number: 5 (lower is better)
Translates to: HRKLCRWSRSPRSPV*RCSCVPGQCWCRWH
Trigger: ATGCCATCTGCACCAACACTGTCCAGGGACACAGCTGCACCTGCAAACCGGGCTACGTGGGGAACGGGACCATCTGCAGAGCTTTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000532434.5
CDS TCA 90 bp AGGAGGGCCCAGAGGGGCAGAGACAGTCAAAGCCCCCTGCCAGGTTaGTGCAGGCAGAATCGTTCCAACAGGTGTGAGTTCTTAAGGCAC +
Preference number: 5 (lower is better)
Translates to: RRAQRGRDSQSPLPG*CRQNRSNRCEFLRH
Trigger: GTGCCTTAAGAACTCACACCTGTTGGAACGATTCTGCCTGCATCAACCTGGCAGGGGGCTTTGACTGTCTCTGCCCCTCTGGGCCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000532434.5
CDS TCA 90 bp CCAAGGGTGGTGTTCACAAGGTCAAGCTCGGTGACGATATCCATCTaGAGGTCAGGGTCCATCCCAAAGCCCACCACTGTCCTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: PRVVFTRSSSVTISI*RSGSIPKPTTVLAV
Trigger: CACTGCCAGGACAGTGGTGGGCTTTGGGATGGACCCTGACCTTCAGATGGATATCGTCACCGAGCTTGACCTTGTGAACACCACCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325319.9
ENST00000357134.10
ENST00000532434.5
CDS-3UTR CAA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGTTGGAGCCGCCAAACTaGCTAGCGGGCGGCGGGGGA +
Preference number: 5 (lower is better)
Translates to: MFLALPLFVILGFSLFKLLEPPN*LAGGGG
Trigger: TCCCCCGCCGCCCGCTAGCAAGTTTGGCGGCTCCAA...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS TCA 90 bp ACACCTGAGCAACTCCAAGGGTGGTGTTCACAAGGTCAAGCTCGGTaGCGATATCCATCTGAAGGTCAGGGTCCATCCCAAAGCCCACCA +
Preference number: 5 (lower is better)
Translates to: TPEQLQGWCSQGQAR*RYPSEGQGPSQSPP
Trigger: TGGTGGGCTTTGGGATGGACCCTGACCTTCAGATGGATATCGTCACCGAGCTTGACCTTGTGAACACCACCCTTGGAGTTGCTCAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000532434.5
CDS GCA 90 bp ATGGACAGACACATTTGTTGGGAGCCACACACGTTCCACCGTATCTaGAGCCCTCTTCACAGAAAGCTCTGCAGATGGTCCCGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: MDRHICWEPHTFHRI*SPLHRKLCRWSRSP
Trigger: TGGGGAACGGGACCATCTGCAGAGCTTTCTGTGAAGAGGGCTGCAGATACGGTGGAACGTGTGTGGCTCCCAACAAATGTGTCTGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000532434.5
CDS-3UTR CAA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCTTGGAGCCGCCAAACTaGCTAGCGGGCGGCGGGGGA +
Preference number: 5 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCLEPPN*LAGGGG
Trigger: TCCCCCGCCGCCCGCTAGCAAGTTTGGCGGCTCCAA...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTTTGGAGCCGCCAAACTaGCTAGCGGGCGGCGGGGGA +
Preference number: 5 (lower is better)
Translates to: FLSLITLDGHFVHSSALSLEPPN*LAGGGG
Trigger: TCCCCCGCCGCCCGCTAGCAAGTTTGGCGGCTCCAA...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS GCA 90 bp CTGTTGTCCTCCTACCTCCGGGGCTGTCTAGAGGCTCCTTTATTGTaGACTCCTCTGCCTTCTGTCTTACTTGTCAGAGTGCCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: LLSSYLRGCLEAPLL*TPLPSVLLVRVPQR
Trigger: TCTTTGAGGCACTCTGACAAGTAAGACAGAAGGCAGAGGAGTGCACAATAAAGGAGCCTCTAGACAGCCCCGGAGGTAGGAGGACAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528046.5
CDS-3UTR CAA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTAAGCCCCCTGCCAGGTaGATGCAGGCAGAATCGTTC +
Preference number: 5 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFKPPAR*MQAESF
Trigger: GAACGATTCTGCCTGCATCAACCTGGCAGGGGGCTT...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS CCA 90 bp GTGCCATTGTCCATCTGCCATGCGGTAAGGAAGTGCCTCTGTCCTTaGCTTCCCATTGTGTATGTAGTGATACCGAATCTCATCCCTCAG +
Preference number: 5 (lower is better)
Translates to: VPLSICHAVRKCLCP*LPIVYVVIPNLIPQ
Trigger: CTGAGGGATGAGATTCGGTATCACTACATACACAATGGGAAGCCAAGGACAGAGGCACTTCCTTACCGCATGGCAGATGGACAATGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000357134.10
ENST00000527873.5
ENST00000529595.1
ENST00000532434.5
CDS CCA 90 bp CAGCATTCTCACCACTTTCTCGCAGTGGCTTCCTGTGAATCCAGATaGACAGACACATTTGTTGGGAGCCACACACGTTCCACCGTATCT +
Preference number: 5 (lower is better)
Translates to: QHSHHFLAVASCESR*TDTFVGSHTRSTVS
Trigger: AGATACGGTGGAACGTGTGTGGCTCCCAACAAATGTGTCTGTCCATCTGGATTCACAGGAAGCCACTGCGAGAAAGTGGTGAGAATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534263.1
CDS-3UTR CAA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTACGCAGCGGGAATGGTaGTGGCACTCAATGATTCCC +
Preference number: 5 (lower is better)
Translates to: KATSKHRPQVETLAIICGTQREW*WHSMIP
Trigger: GGGAATCATTGAGTGCCACAACCATTCCCGCTGCGT...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS TCA 90 bp GTCACTGTGTGCTGCCCACCACACTTCGCTGATGGAGGAATTGTGTaGGAAAAAGAGAAGCTTCTCAGGGGGATCTCACAGCCAAGTAAA +
Preference number: 5 (lower is better)
Translates to: VTVCCPPHFADGGIV*EKEKLLRGISQPSK
Trigger: TTTACTTGGCTGTGAGATCCCCCTGAGAAGCTTCTCTTTTTCTCACACAATTCCTCCATCAGCGAAGTGTGGTGGGCAGCACACAGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000529218.5
ENST00000534263.1
CDS GCA 90 bp CAGTGCAACCTTGTGCCATTGTCCATCTGCCATGCGGTAAGGAAGTaGCTCTGTCCTTGGCTTCCCATTGTGTATGTAGTGATACCGAAT +
Preference number: 5 (lower is better)
Translates to: QCNLVPLSICHAVRK*LCPWLPIVYVVIPN
Trigger: ATTCGGTATCACTACATACACAATGGGAAGCCAAGGACAGAGGCACTTCCTTACCGCATGGCAGATGGACAATGGCACAAGGTTGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000357134.10
ENST00000527873.5
ENST00000529595.1
ENST00000532434.5
CDS GCA 90 bp GGTAACTTCCCAAACAGTCGTGCTCTGCCTCCTTTTGAAACATTCTaGCCTTTTGACACTGCATTCTTCCTGTTGTCCTCCTACCTCCGG +
Preference number: 5 (lower is better)
Translates to: GNFPNSRALPPFETF*PFDTAFFLLSSYLR
Trigger: CCGGAGGTAGGAGGACAACAGGAAGAATGCAGTGTCAAAAGGGCAGAATGTTTCAAAAGGAGGCAGAGCACGACTGTTTGGGAAGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528046.5
CDS GCA 90 bp ATGGACAGACACATTTGTTGGGAGCCACACACGTTCCACCGTATCTaGAGCCCTCTTCACAGAAAGTGCATTGTGGCATTCTCCACAATC +
Preference number: 5 (lower is better)
Translates to: MDRHICWEPHTFHRI*SPLHRKCIVAFSTI
Trigger: GATTGTGGAGAATGCCACAATGCACTTTCTGTGAAGAGGGCTGCAGATACGGTGGAACGTGTGTGGCTCCCAACAAATGTGTCTGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529218.5
ENST00000534263.1
CDS CCA 90 bp CTGGTGTCACATTCTGGGCAACAGAATAGGTCAGCACTTGGATTCTaGCAATCACAAGCTGTCCGTCGGCAGAATATCTTGCCATCCTTG +
Preference number: 5 (lower is better)
Translates to: LVSHSGQQNRSALGF*QSQAVRRQNILPSL
Trigger: CAAGGATGGCAAGATATTCTGCCGACGGACAGCTTGTGATTGCCAGAATCCAAGTGCTGACCTATTCTGTTGCCCAGAATGTGACACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000532434.5
CDS-3UTR CAA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTACTGACAGTGCAACCTaGTGCCATTGTCCATCTGCC +
Preference number: 5 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFTDSAT*CHCPSA
Trigger: GGCAGATGGACAATGGCACAAGGTTGCACTGTCAGT...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGATTCCTGGGGGAAGGTaGGTATCTGGAGGGTCTATC +
Preference number: 5 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWIPGGR*VSGGSI
Trigger: GATAGACCCTCCAGATACCAACCTTCCCCCAGGAAT...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGCATTCCCGACAGCTCTaGGTTAAAATCCGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWHSRQL*VKIRWP
Trigger: AGGCCAGCGGATTTTAACCAAGAGCTGTCGGGAATG...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATAAGCCCCCTGCCAGGTaGATGCAGGCAGAATCGTTC +
Preference number: 5 (lower is better)
Translates to: FLALPLFVILGFSLFKLNKPPAR*MQAESF
Trigger: GAACGATTCTGCCTGCATCAACCTGGCAGGGGGCTT...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGTACTCACAGCTCAAGTaGGGGCAAGTGAGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: MFLALPLFVILGFSLFKLYSQLK*GQVSGQ
Trigger: CTGGCCACTCACTTGCCCCAACTTGAGCTGTGAGTA...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGTGGCCCTTCCCCTCTTaGTCATACTTGGCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: MFLALPLFVILGFSLFKLWPFPS*SYLASA
Trigger: GGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCA...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS CCA 90 bp CTGGTGTCACATTCTGGGCAACAGAATAGGTCAGCACTTGGATTCTaGCAATCACAAGCTGTCCGTCGGCAGAATATCTTGCCATCCAAT +
Preference number: 5 (lower is better)
Translates to: LVSHSGQQNRSALGF*QSQAVRRQNILPSN
Trigger: ATTGGATGGCAAGATATTCTGCCGACGGACAGCTTGTGATTGCCAGAATCCAAGTGCTGACCTATTCTGTTGCCCAGAATGTGACACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529218.5
CDS-3UTR CAA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTTGGCCAAGCCATAAATaGATTCCTGGGGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFWPSHK*IPGGRL
Trigger: CAACCTTCCCCCAGGAATCAATTTATGGCTTGGCCA...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGTCCACGGCACCACTTTaGCAAGTGCAGTTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: MFLALPLFVILGFSLFKLSTAPL*QVQFLQ
Trigger: TTGCAGGAACTGCACTTGCAAAAGTGGTGCCGTGGA...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGCATTCCCGACAGCTCTaGGTTAAAATCCGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: MFLALPLFVILGFSLFKLHSRQL*VKIRWP
Trigger: AGGCCAGCGGATTTTAACCAAGAGCTGTCGGGAATG...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCACGCAGCGGGAATGGTaGTGGCACTCAATGATTCCC +
Preference number: 5 (lower is better)
Translates to: LCFWPFPSLSYLASACLSTQREW*WHSMIP
Trigger: GGGAATCATTGAGTGCCACAACCATTCCCGCTGCGT...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTAAGCCCCCTGCCAGGTaGATGCAGGCAGAATCGTTC +
Preference number: 5 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGKPPAR*MQAESF
Trigger: GAACGATTCTGCCTGCATCAACCTGGCAGGGGGCTT...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCCGTCGGCAGAATATCTaGCCATCCTTGCAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCRRQNI*PSLQEQ
Trigger: CTGCTCCTGCAAGGATGGCAAGATATTCTGCCGACG...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGCGTCGGCAGAATATCTaGCCATCCTTGCAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: YRFLSLITLDGHFVHSSARRQNI*PSLQEQ
Trigger: CTGCTCCTGCAAGGATGGCAAGATATTCTGCCGACG...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTCAGCTATGGGTCCAATaGTCTCCACTTCGATACAGC +
Preference number: 5 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFQLWVQ*SPLRYS
Trigger: GCTGTATCGAAGTGGAGACAATTGGACCCATAGCTG...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS TCA 90 bp TCTTATTCTCTACATTGTGCCAAAGTTAATGGCCAGACGGTGGCCTaGCCACTAAGTGAACCCTTGGTAACTTCCCAAACAGTCGTGCTC +
Preference number: 5 (lower is better)
Translates to: SYSLHCAKVNGQTVA*PLSEPLVTSQTVVL
Trigger: GAGCACGACTGTTTGGGAAGTTACCAAGGGTTCACTTAGTGGTCAGGCCACCGTCTGGCCATTAACTTTGGCACAATGTAGAGAATAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528046.5
CDS GCA 90 bp TCCAGTTCTCGAATGGACAGTATCACTCCTGAAGTGGATGGCTTCTaGTGTACAGTGGCCAAAATGGTGAATTCACTCTTGTTCCGGAAC +
Preference number: 5 (lower is better)
Translates to: SSSRMDSITPEVDGF*CTVAKMVNSLLFRN
Trigger: GTTCCGGAACAAGAGTGAATTCACCATTTTGGCCACTGTACAGCAGAAGCCATCCACTTCAGGAGTGATACTGTCCATTCGAGAACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000524738.1
ENST00000527873.5
ENST00000528046.5
ENST00000529595.1
ENST00000532434.5
CDS CCA 90 bp CCATCTTGGATGATCCCTTTGAATAAGCCATGCTTTTGGTTGCGCTaGCCAAGCCATAAATTGATTCCTGGGGGAAGGTTGGTATCTGGA +
Preference number: 5 (lower is better)
Translates to: PSWMIPLNKPCFWLR*PSHKLIPGGRLVSG
Trigger: TCCAGATACCAACCTTCCCCCAGGAATCAATTTATGGCTTGGCCAGCGCAACCAAAAGCATGGCTTATTCAAAGGGATCATCCAAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000527873.5
ENST00000529595.1
ENST00000532434.5
CDS CCA 90 bp ACATTCATCAATGTCTTTCTCGCAGTGGCTTCCTGTGAATCCAGATaGACAGACACATTTGTTGGGAGCCACACACGTTCCACCGTATCT +
Preference number: 5 (lower is better)
Translates to: TFINVFLAVASCESR*TDTFVGSHTRSTVS
Trigger: AGATACGGTGGAACGTGTGTGGCTCCCAACAAATGTGTCTGTCCATCTGGATTCACAGGAAGCCACTGCGAGAAAGACATTGATGAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532434.5
CDS-3UTR CAA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGCACTCCCTGAAGGGATaGCTGAAGCAGAGACTTCAG +
Preference number: 5 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAHSLKG*LKQRLQ
Trigger: CTGAAGTCTCTGCTTCAGCAATCCCTTCAGGGAGTG...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298925.9
CDS-3UTR CAA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTGCAACCTTGTGCCATaGTCCATCTGCCATGCGGTA +
Preference number: 5 (lower is better)
Translates to: YRFLSLITLDGHFVHSSACNLVP*SICHAV
Trigger: TACCGCATGGCAGATGGACAATGGCACAAGGTTGCA...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR CAA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCATTCCTGGGGGAAGGTaGGTATCTGGAGGGTCTATC +
Preference number: 5 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCIPGGR*VSGGSI
Trigger: GATAGACCCTCCAGATACCAACCTTCCCCCAGGAAT...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCATTCCTGGGGGAAGGTaGGTATCTGGAGGGTCTATC +
Preference number: 5 (lower is better)
Translates to: LCFWPFPSLSYLASACLSIPGGR*VSGGSI
Trigger: GATAGACCCTCCAGATACCAACCTTCCCCCAGGAAT...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCCATTCCCGACAGCTCTaGGTTAAAATCCGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCHSRQL*VKIRWP
Trigger: AGGCCAGCGGATTTTAACCAAGAGCTGTCGGGAATG...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTCGTCGGCAGAATATCTaGCCATCCTTGCAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: FLSLITLDGHFVHSSALSRRQNI*PSLQEQ
Trigger: CTGCTCCTGCAAGGATGGCAAGATATTCTGCCGACG...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGCAGCTATGGGTCCAATaGTCTCCACTTCGATACAGC +
Preference number: 5 (lower is better)
Translates to: MFLALPLFVILGFSLFKLQLWVQ*SPLRYS
Trigger: GCTGTATCGAAGTGGAGACAATTGGACCCATAGCTG...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTTACTCACAGCTCAAGTaGGGGCAAGTGAGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGYSQLK*GQVSGQ
Trigger: CTGGCCACTCACTTGCCCCAACTTGAGCTGTGAGTA...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTTACTCACAGCTCAAGTaGGGGCAAGTGAGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: FLSLITLDGHFVHSSALSYSQLK*GQVSGQ
Trigger: CTGGCCACTCACTTGCCCCAACTTGAGCTGTGAGTA...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGCCCTCTTTGTCATACTaGGCTTCAGCCTGTTTAAGC +
Preference number: 5 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWPSLSY*ASACLS
Trigger: GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGG...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS TCA 90 bp CTCATAAATCCTGTGCTCCAGTTCTCGAATGGACAGTATCACTCCTaGAGTGGATGGCTTCTGCTGTACAGTGGCCAAAATGGTGAATTC +
Preference number: 5 (lower is better)
Translates to: LINPVLQFSNGQYHS*SGWLLLYSGQNGEF
Trigger: GAATTCACCATTTTGGCCACTGTACAGCAGAAGCCATCCACTTCAGGAGTGATACTGTCCATTCGAGAACTGGAGCACAGGATTTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325319.9
ENST00000524738.1
CDS CCA 90 bp ACATTCATCAATATCTTTCTCGCAGTGGCTTCCTGTGAATCCAGATaGACAGACACATTTGTTGGGAGCCACACACGTTCCACCGTATCT +
Preference number: 5 (lower is better)
Translates to: TFINIFLAVASCESR*TDTFVGSHTRSTVS
Trigger: AGATACGGTGGAACGTGTGTGGCTCCCAACAAATGTGTCTGTCCATCTGGATTCACAGGAAGCCACTGCGAGAAAGATATTGATGAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000529218.5
CDS-3UTR CAA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATGAAGTGCCTCTGTCCTaGGCTTCCCATTGTGTATGT +
Preference number: 5 (lower is better)
Translates to: FLALPLFVILGFSLFKLNEVPLS*ASHCVC
Trigger: ACATACACAATGGGAAGCCAAGGACAGAGGCACTTC...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTTGCAACCTTGTGCCATaGTCCATCTGCCATGCGGTA +
Preference number: 5 (lower is better)
Translates to: FLSLITLDGHFVHSSALSCNLVP*SICHAV
Trigger: TACCGCATGGCAGATGGACAATGGCACAAGGTTGCA...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTGGCCAAGCCATAAATaGATTCCTGGGGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAWPSHK*IPGGRL
Trigger: CAACCTTCCCCCAGGAATCAATTTATGGCTTGGCCA...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCTGGCCAAGCCATAAATaGATTCCTGGGGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCWPSHK*IPGGRL
Trigger: CAACCTTCCCCCAGGAATCAATTTATGGCTTGGCCA...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCAAGCCATGCTTTTGGTaGCGCTGGCCAAGCCATAAA +
Preference number: 5 (lower is better)
Translates to: LCFWPFPSLSYLASACLSKPCFW*RWPSHK
Trigger: TTTATGGCTTGGCCAGCGCAACCAAAAGCATGGCTT...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGAAGCCATGCTTTTGGTaGCGCTGGCCAAGCCATAAA +
Preference number: 5 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAKPCFW*RWPSHK
Trigger: TTTATGGCTTGGCCAGCGCAACCAAAAGCATGGCTT...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTTCCACGGCACCACTTTaGCAAGTGCAGTTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGSTAPL*QVQFLQ
Trigger: TTGCAGGAACTGCACTTGCAAAAGTGGTGCCGTGGA...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTTATAACCCAGGAAGGTaGACACACACAGTATTGGCA +
Preference number: 5 (lower is better)
Translates to: KATSKHRPQVETLAIICGYNPGR*THTVLA
Trigger: TGCCAATACTGTGTGTGTCAACCTTCCTGGGTTATA...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTTATAACCCAGGAAGGTaGACACACACAGTATTGGCA +
Preference number: 5 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFYNPGR*THTVLA
Trigger: TGCCAATACTGTGTGTGTCAACCTTCCTGGGTTATA...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTGGACAGACACATTTGTaGGGAGCCACACACGTTCCA +
Preference number: 5 (lower is better)
Translates to: FLSLITLDGHFVHSSALSGQTHL*GATHVP
Trigger: TGGAACGTGTGTGGCTCCCAACAAATGTGTCTGTCC...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTAGAATAGGTCAGCACTaGGATTCTGGCAATCACAAG +
Preference number: 5 (lower is better)
Translates to: KATSKHRPQVETLAIICGRIGQH*DSGNHK
Trigger: CTTGTGATTGCCAGAATCCAAGTGCTGACCTATTCT...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGAGAATAGGTCAGCACTaGGATTCTGGCAATCACAAG +
Preference number: 5 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWRIGQH*DSGNHK
Trigger: CTTGTGATTGCCAGAATCCAAGTGCTGACCTATTCT...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCCAGCTATGGGTCCAATaGTCTCCACTTCGATACAGC +
Preference number: 5 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCQLWVQ*SPLRYS
Trigger: GCTGTATCGAAGTGGAGACAATTGGACCCATAGCTG...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCTCTTGCATTTACAGGTaGTGCAGGGAGATCCAGCCA +
Preference number: 5 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCSCIYR*CREIQP
Trigger: TGGCTGGATCTCCCTGCACAACCTGTAAATGCAAGA...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTCTTGCATTTACAGGTaGTGCAGGGAGATCCAGCCA +
Preference number: 5 (lower is better)
Translates to: LCFWPFPSLSYLASACLSSCIYR*CREIQP
Trigger: TGGCTGGATCTCCCTGCACAACCTGTAAATGCAAGA...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTCAGACTCTTCCATTCTaGCATTTACAGGTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: KATSKHRPQVETLAIICGQTLPF*HLQVVQ
Trigger: CTGCACAACCTGTAAATGCAAGAATGGAAGAGTCTG...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGCCCTCTTTGTCATACTaGGCTTCAGCCTGTTTAAGC +
Preference number: 5 (lower is better)
Translates to: MFLALPLFVILGFSLFKLPSLSY*ASACLS
Trigger: GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGG...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS TCA 90 bp TTCAAAATAGCTGTGCTCCAGTTCTCGAATGGACAGTATCACTCCTaGAGTGGATGGCTTCTGCTGTACAGTGGCCAAAATGGTGAATTC +
Preference number: 5 (lower is better)
Translates to: FKIAVLQFSNGQYHS*SGWLLLYSGQNGEF
Trigger: GAATTCACCATTTTGGCCACTGTACAGCAGAAGCCATCCACTTCAGGAGTGATACTGTCCATTCGAGAACTGGAGCACAGCTATTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298925.9
ENST00000357134.10
ENST00000527873.5
ENST00000528046.5
ENST00000529595.1
ENST00000532434.5
CDS-3UTR CAA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATGAGCAGTCCACTCACTaGACAAGTCTTCTCACAATG +
Preference number: 5 (lower is better)
Translates to: FLALPLFVILGFSLFKLNEQSTH*TSLLTM
Trigger: CATTGTGAGAAGACTTGTCAAGTGAGTGGACTGCTC...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGGAGCAGTCCACTCACTaGACAAGTCTTCTCACAATG +
Preference number: 5 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAEQSTH*TSLLTM
Trigger: CATTGTGAGAAGACTTGTCAAGTGAGTGGACTGCTC...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCATCTACCCAAGAGTCTaGATCTCGATAGAGCAGTCC +
Preference number: 5 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCIYPRV*ISIEQS
Trigger: GGACTGCTCTATCGAGATCAAGACTCTTGGGTAGAT...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGATCTACCCAAGAGTCTaGATCTCGATAGAGCAGTCC +
Preference number: 5 (lower is better)
Translates to: YRFLSLITLDGHFVHSSAIYPRV*ISIEQS
Trigger: GGACTGCTCTATCGAGATCAAGACTCTTGGGTAGAT...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGCTCCATAGATACATTTaGGTCGGCAGACCTTACAGC +
Preference number: 5 (lower is better)
Translates to: YRFLSLITLDGHFVHSSALHRYI*VGRPYS
Trigger: GCTGTAAGGTCTGCCGACCAAAATGTATCTATGGAG...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATCTCCATAGATACATTTaGGTCGGCAGACCTTACAGC +
Preference number: 5 (lower is better)
Translates to: FLALPLFVILGFSLFKLNLHRYI*VGRPYS
Trigger: GCTGTAAGGTCTGCCGACCAAAATGTATCTATGGAG...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGAATATCTTGCCATCCTaGCAGGAGCAGACAGAACAC +
Preference number: 5 (lower is better)
Translates to: YRFLSLITLDGHFVHSSANILPS*QEQTEH
Trigger: GTGTTCTGTCTGCTCCTGCAAGGATGGCAAGATATT...CGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTTCTTGCATTTACAGGTaGTGCAGGGAGATCCAGCCA +
Preference number: 5 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGSCIYR*CREIQP
Trigger: TGGCTGGATCTCCCTGCACAACCTGTAAATGCAAGA...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGTCTATCCTTAATCACGTaGGATGGTCATTTCGTCCAT +
Preference number: 5 (lower is better)
Translates to: KATSKHRPQVETLAIICGLSLIT*DGHFVH
Trigger: ATGGACGAAATGACCATCCAACGTGATTAAGGATAG...ACCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTCTATCCTTAATCACGTaGGATGGTCATTTCGTCCAT +
Preference number: 5 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFLSLIT*DGHFVH
Trigger: ATGGACGAAATGACCATCCAACGTGATTAAGGATAG...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCCCCTCTTTGTCATACTaGGCTTCAGCCTGTTTAAGC +
Preference number: 5 (lower is better)
Translates to: LCFWPFPSLSYLASACLSPSLSY*ASACLS
Trigger: GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGG...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS TCA 90 bp CACTTCGATACAGCTTGTGACCATTTTGGTCTAAACATTGACTTGTaGCTCTGGTGTCACATTCTGGGCAACAGAATAGGTCAGCACTTG +
Preference number: 5 (lower is better)
Translates to: HFDTACDHFGLNIDL*LWCHILGNRIGQHL
Trigger: CAAGTGCTGACCTATTCTGTTGCCCAGAATGTGACACCAGAGTCACAAGTCAATGTTTAGACCAAAATGGTCACAAGCTGTATCGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000529218.5
ENST00000532434.5
CDS-3UTR CAA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAGAAATCACTGCAGGTaGGGCAAGTGTGATTTAGAT +
Preference number: 5 (lower is better)
Translates to: MFLALPLFVILGFSLFKLRNHCR*GKCDLD
Trigger: ATCTAAATCACACTTGCCCAACCTGCAGTGATTTCT...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTGGCAATTATCTGTGGAGTTTTGCAGTCATCTaGGCCAAAAGCTCTTGTAAA +
Preference number: 5 (lower is better)
Translates to: KGNLQTPSSGGNFGNYLWSFAVI*AKSSCK
Trigger: TTTACAAGAGCTTTTGGCCAAGATGACTGCAAAACT...CCACAGATAATTGCCAAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AAAGTGGTAGGTCCAAAAGGCAACCTCCAAACACCGTCCTCAGGTGGAAACTTTAGTTTTGCAGTCATCTaGGCCAAAAGCTCTTGTAAA +
Preference number: 5 (lower is better)
Translates to: KVVGPKGNLQTPSSGGNFSFAVI*AKSSCK
Trigger: TTTACAAGAGCTTTTGGCCAAGATGACTGCAAAACT...AAAGTTTCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTGAGCAGTCCACTCACTaGACAAGTCTTCTCACAATG +
Preference number: 5 (lower is better)
Translates to: FLSLITLDGHFVHSSALSEQSTH*TSLLTM
Trigger: CATTGTGAGAAGACTTGTCAAGTGAGTGGACTGCTC...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTATCTACCCAAGAGTCTaGATCTCGATAGAGCAGTCC +
Preference number: 5 (lower is better)
Translates to: FLSLITLDGHFVHSSALSIYPRV*ISIEQS
Trigger: GGACTGCTCTATCGAGATCAAGACTCTTGGGTAGAT...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTCTCCATAGATACATTTaGGTCGGCAGACCTTACAGC +
Preference number: 5 (lower is better)
Translates to: FLSLITLDGHFVHSSALSLHRYI*VGRPYS
Trigger: GCTGTAAGGTCTGCCGACCAAAATGTATCTATGGAG...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTAATATCTTGCCATCCTaGCAGGAGCAGACAGAACAC +
Preference number: 5 (lower is better)
Translates to: FLSLITLDGHFVHSSALSNILPS*QEQTEH
Trigger: GTGTTCTGTCTGCTCCTGCAAGGATGGCAAGATATT...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTAATATCTTGCCATCCTaGCAGGAGCAGACAGAACAC +
Preference number: 5 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGNILPS*QEQTEH
Trigger: GTGTTCTGTCTGCTCCTGCAAGGATGGCAAGATATT...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAATAGAATAGGTCAGCACTaGGATTCTGGCAATCACAAG +
Preference number: 5 (lower is better)
Translates to: FLALPLFVILGFSLFKLNRIGQH*DSGNHK
Trigger: CTTGTGATTGCCAGAATCCAAGTGCTGACCTATTCT...ATTCAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS TCA 90 bp ATGTATTTGTGGAGTATGTTCTCTGTGCCAGGCTCTGTACTGTGGTaGTTAAGATGGACTCAGTCTGGAGAGAAATATCTGGCCAGTATT +
Preference number: 5 (lower is better)
Translates to: MYLWSMFSVPGSVLW*LRWTQSGEKYLASI
Trigger: AATACTGGCCAGATATTTCTCTCCAGACTGAGTCCATCTTAATCACCACAGTACAGAGCCTGGCACAGAGAACATACTCCACAAATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528046.5
CDS-3UTR CAA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCTCTTGGATGATCCCTTaGAATAAGCCATGCTTTTGG +
Preference number: 5 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCSWMIP*NKPCFW
Trigger: CCAAAAGCATGGCTTATTCAAAGGGATCATCCAAGA...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp ATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCTGAGTTTTGCAGTCATCTaGGCCAAAAGCTCTTGTAAA +
Preference number: 5 (lower is better)
Translates to: MFLALPLFVILGFSLFKLSFAVI*AKSSCK
Trigger: TTTACAAGAGCTTTTGGCCAAGATGACTGCAAAACT...CAGCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTCAGACTCTTCCATTCTaGCATTTACAGGTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGQTLPF*HLQVVQ
Trigger: CTGCACAACCTGTAAATGCAAGAATGGAAGAGTCTG...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCGTTGAGTCAGACTCTTCCATTCTaGCATTTACAGGTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: FLSLITLDGHFVHSSALSQTLPF*HLQVVQ
Trigger: CTGCACAACCTGTAAATGCAAGAATGGAAGAGTCTG...ACTCAACGCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTTGGCCCTTCCCCTCTTaGTCATACTTGGCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: RFSTMKCMYNATGLYIHIWPFPS*SYLASA
Trigger: GGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCA...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTACTGACAGTGCAACCTaGTGCCATTGTCCATCTGCC +
Preference number: 5 (lower is better)
Translates to: RFSTMKCMYNATGLYIHITDSAT*CHCPSA
Trigger: GGCAGATGGACAATGGCACAAGGTTGCACTGTCAGT...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298925.9
ENST00000357134.10
CDS-3UTR CAA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTTCTTGGATGATCCCTTaGAATAAGCCATGCTTTTGG +
Preference number: 5 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGSWMIP*NKPCFW
Trigger: CCAAAAGCATGGCTTATTCAAAGGGATCATCCAAGA...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp TTATGTTTTTGGCCCTTCCCCTCTTTGTCATACTTGGCTTCAGCCTGTTTAAGCATGACAGTTTTCCAATaGACTAAGTCTTGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LCFWPFPSLSYLASACLSMTVFQ*TKSCLC
Trigger: GCAGAGACAAGACTTAGTCAATTGGAAAACTGTCAT...GCTTAAACAGGCTGAAGCCAAGTATGACAAAGAGGGGAAGGGCCAAAAACATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp CTACCGATTCCTATCCTTAATCACGTTGGATGGTCATTTCGTCCATTCTTCTGCATGACAGTTTTCCAATaGACTAAGTCTTGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LPIPILNHVGWSFRPFFCMTVFQ*TKSCLC
Trigger: GCAGAGACAAGACTTAGTCAATTGGAAAACTGTCAT...GCAGAAGAATGGACGAAATGACCATCCAACGTGATTAAGGATAGGAATCGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTGGACAGACACATTTGTaGGGAGCCACACACGTTCCA +
Preference number: 5 (lower is better)
Translates to: RFSTMKCMYNATGLYIHIGQTHL*GATHVP
Trigger: TGGAACGTGTGTGGCTCCCAACAAATGTGTCTGTCC...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS GCA 90 bp AGATGGACTCAGTCTGGAGAGAAATATCTGGCCAGTATTTTTAGCTaGACTGACCAATACCACCCACTCTTACAAATCTTATTCTCTACA +
Preference number: 5 (lower is better)
Translates to: RWTQSGEKYLASIFS*TDQYHPLLQILFST
Trigger: TGTAGAGAATAAGATTTGTAAGAGTGGGTGGTATTGGTCAGTGCAGCTAAAAATACTGGCCAGATATTTCTCTCCAGACTGAGTCCATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528046.5
CDS-3UTR CAA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTAAGCCATGCTTTTGGTaGCGCTGGCCAAGCCATAAA +
Preference number: 5 (lower is better)
Translates to: RFSTMKCMYNATGLYIHIKPCFW*RWPSHK
Trigger: TTTATGGCTTGGCCAGCGCAACCAAAAGCATGGCTT...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS GCA 90 bp ACCAAAATCATGAAGTTGAGATCTATTCAATTGTGTGAAAAGCTGTaGTCTTTCTCTGGCTTTGAACTAGCTTCCTTGGGTGGAATTCTG +
Preference number: 5 (lower is better)
Translates to: TKIMKLRSIQLCEKL*SFSGFELASLGGIL
Trigger: CAGAATTCCACCCAAGGAAGCTAGTTCAAAGCCAGAGAAAGAGCACAGCTTTTCACACAATTGAATAGATCTCAACTTCATGATTTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529218.5
CDS-3UTR CAA 90 bp CTTTTAACAACCATTGACTTAAATGCACGGCACTGTAGGTCACCTAGACTAGGTCTGCATAATTTAGTTTaGCAGTCATCTTGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: LLTTIDLNARHCRSPRLGLHNLV*QSSWPK
Trigger: TTTTGGCCAAGATGACTGCAAAACTAAATTATGCAG...ACCTAGTCTAGGTGACCTACAGTGCCGTGCATTTAAGTCAATGGTTGTTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTTCTTGGATGATCCCTTaGAATAAGCCATGCTTTTGG +
Preference number: 5 (lower is better)
Translates to: RFSTMKCMYNATGLYIHISWMIP*NKPCFW
Trigger: CCAAAAGCATGGCTTATTCAAAGGGATCATCCAAGA...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTAGAAATCACTGCAGGTaGGGCAAGTGTGATTTAGAT +
Preference number: 5 (lower is better)
Translates to: RFSTMKCMYNATGLYIHIRNHCR*GKCDLD
Trigger: ATCTAAATCACACTTGCCCAACCTGCAGTGATTTCT...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS-3UTR CAA 90 bp AGGTTCAGCACTATGAAATGTATGTATAATGCGACTGGACTCTACATACATATTATGACAGTTTTCCAATaGACTAAGTCTTGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: RFSTMKCMYNATGLYIHIMTVFQ*TKSCLC
Trigger: GCAGAGACAAGACTTAGTCAATTGGAAAACTGTCAT...AATATGTATGTAGAGTCCAGTCGCATTATACATACATTTCATAGTGCTGAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
CDS GCA 72 bp AGCGGGCGGCGGGGGAGGTGGCTCGGCAGCGCCGGGTaGTGCGCTCGCATATGCGCCCGGGAAGGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: SGRRGRWLGSAG*CARICAREGSP
Trigger: GGGGCTGCCTTCCCGGGCGCATATGCGAGCGCAGCACCCGGCGCTGCCGAGCCACCTCCCCCGCCGCCCGCT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325319.9
CDS GCA 72 bp CTCTGCAGATGGTCCCGTTCCCCACGTAGCCCGGTTTaGAGGTGCAGCTGTGTCCCTGGACAGTGTTGGTGC +
Preference number: 6 (lower is better)
Translates to: LCRWSRSPRSPV*RCSCVPGQCWC
Trigger: GCACCAACACTGTCCAGGGACACAGCTGCACCTGCAAACCGGGCTACGTGGGGAACGGGACCATCTGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000532434.5
CDS GCA 72 bp GGAGGGCCCAGAGGGGCAGAGACAGTCAAAGCCCCCTaGCAGGTTGATGCAGGCAGAATCGTTCCAACAGGT +
Preference number: 6 (lower is better)
Translates to: GGPRGAETVKAP*QVDAGRIVPTG
Trigger: ACCTGTTGGAACGATTCTGCCTGCATCAACCTGGCAGGGGGCTTTGACTGTCTCTGCCCCTCTGGGCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000532434.5
CDS GCA 72 bp TTTGGTCGGCAGACCTTACAGCACTGGCCAGCAATGTaGACTGGGAGGGAGTCTGGGGAGCAATTGAGAGGG +
Preference number: 6 (lower is better)
Translates to: FGRQTLQHWPAM*TGRESGEQLRG
Trigger: CCCTCTCAATTGCTCCCCAGACTCCCTCCCAGTGCACATTGCTGGCCAGTGCTGTAAGGTCTGCCGACCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000532434.5
CDS TCA 72 bp CAGAGGGGCAGAGACAGTCAAAGCCCCCTGCCAGGTTaGTGCAGGCAGAATCGTTCCAACAGGTGTGAGTTC +
Preference number: 6 (lower is better)
Translates to: QRGRDSQSPLPG*CRQNRSNRCEF
Trigger: GAACTCACACCTGTTGGAACGATTCTGCCTGCATCAACCTGGCAGGGGGCTTTGACTGTCTCTGCCCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000532434.5
CDS TCA 72 bp GTGTTCACAAGGTCAAGCTCGGTGACGATATCCATCTaGAGGTCAGGGTCCATCCCAAAGCCCACCACTCCC +
Preference number: 6 (lower is better)
Translates to: VFTRSSSVTISI*RSGSIPKPTTP
Trigger: GGGAGTGGTGGGCTTTGGGATGGACCCTGACCTTCAGATGGATATCGTCACCGAGCTTGACCTTGTGAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298925.9
CDS TCA 72 bp GTGTTCACAAGGTCAAGCTCGGTGACGATATCCATCTaGAGGTCAGGGTCCATCCCAAAGCCCACCACTGTC +
Preference number: 6 (lower is better)
Translates to: VFTRSSSVTISI*RSGSIPKPTTV
Trigger: GACAGTGGTGGGCTTTGGGATGGACCCTGACCTTCAGATGGATATCGTCACCGAGCTTGACCTTGTGAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325319.9
ENST00000357134.10
ENST00000532434.5
CDS GCA 72 bp CACATTTGTTGGGAGCCACACACGTTCCACCGTATCTaGAGCCCTCTTCACAGAAAGCTCTGCAGATGGTCC +
Preference number: 6 (lower is better)
Translates to: HICWEPHTFHRI*SPLHRKLCRWS
Trigger: GGACCATCTGCAGAGCTTTCTGTGAAGAGGGCTGCAGATACGGTGGAACGTGTGTGGCTCCCAACAAATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000532434.5
CDS GCA 72 bp GTCCCAGTGCCATCTCCAGGAATCATAGTCACTGTGTaGTGCCCACCACACTTCGCTGATGGAGGAATTGTG +
Preference number: 6 (lower is better)
Translates to: VPVPSPGIIVTV*CPPHFADGGIV
Trigger: CACAATTCCTCCATCAGCGAAGTGTGGTGGGCAGCACACAGTGACTATGATTCCTGGAGATGGCACTGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529218.5
ENST00000534263.1
CDS CAA 72 bp TGGCTTCCTGTGAATCCAGATGGACAGACACATTTGTaGGGAGCCACACACGTTCCACCGTATCTGCAGCCC +
Preference number: 6 (lower is better)
Translates to: WLPVNPDGQTHL*GATHVPPYLQP
Trigger: GGGCTGCAGATACGGTGGAACGTGTGTGGCTCCCAACAAATGTGTCTGTCCATCTGGATTCACAGGAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000529218.5
ENST00000532434.5
ENST00000534263.1
CDS CAA 90 bp TTCTCGCAGTGGCTTCCTGTGAATCCAGATGGACAGACACATTTGTaGGGAGCCACACACGTTCCACCGTATCTGCAGCCCTCTTCACAG +
Preference number: 6 (lower is better)
Translates to: FSQWLPVNPDGQTHL*GATHVPPYLQPSSQ
Trigger: CTGTGAAGAGGGCTGCAGATACGGTGGAACGTGTGTGGCTCCCAACAAATGTGTCTGTCCATCTGGATTCACAGGAAGCCACTGCGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000529218.5
ENST00000532434.5
ENST00000534263.1
CDS TCA 72 bp CAACTCCAAGGGTGGTGTTCACAAGGTCAAGCTCGGTaGCGATATCCATCTGAAGGTCAGGGTCCATCCCAA +
Preference number: 6 (lower is better)
Translates to: QLQGWCSQGQAR*RYPSEGQGPSQ
Trigger: TTGGGATGGACCCTGACCTTCAGATGGATATCGTCACCGAGCTTGACCTTGTGAACACCACCCTTGGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000532434.5
CDS GCA 72 bp TCCTACCTCCGGGGCTGTCTAGAGGCTCCTTTATTGTaGACTCCTCTGCCTTCTGTCTTACTTGTCAGAGTG +
Preference number: 6 (lower is better)
Translates to: SYLRGCLEAPLL*TPLPSVLLVRV
Trigger: CACTCTGACAAGTAAGACAGAAGGCAGAGGAGTGCACAATAAAGGAGCCTCTAGACAGCCCCGGAGGTAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528046.5
CDS CCA 72 bp AGCTGTATACTCACAGCTCAAGTTGGGGCAAGTGAGTaGCCAGCAATCTACCTCTCCTTCCAGACACCGACA +
Preference number: 6 (lower is better)
Translates to: SCILTAQVGASE*PAIYLSFQTPT
Trigger: TGTCGGTGTCTGGAAGGAGAGGTAGATTGCTGGCCACTCACTTGCCCCAACTTGAGCTGTGAGTATACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000529218.5
ENST00000532434.5
CDS CCA 72 bp CACCACTTTCTCGCAGTGGCTTCCTGTGAATCCAGATaGACAGACACATTTGTTGGGAGCCACACACGTTCC +
Preference number: 6 (lower is better)
Translates to: HHFLAVASCESR*TDTFVGSHTRS
Trigger: GGAACGTGTGTGGCTCCCAACAAATGTGTCTGTCCATCTGGATTCACAGGAAGCCACTGCGAGAAAGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534263.1
CDS CCA 72 bp TTAGACACTTATGTGCCAGTCTGTTGCAGTAAGCCCTaGAGAGCAAACAAGGTCCCTGCTCTCGCAGACCTC +
Preference number: 6 (lower is better)
Translates to: LDTYVPVCCSKP*RANKVPALADL
Trigger: GAGGTCTGCGAGAGCAGGGACCTTGTTTGCTCTCCAGGGCTTACTGCAACAGACTGGCACATAAGTGTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534263.1
CDS CAA 72 bp GAAACATTCTGCCCTTTTGACACTGCATTCTTCCTGTaGTCCTCCTACCTCCGGGGCTGTCTAGAGGCTCCT +
Preference number: 6 (lower is better)
Translates to: ETFCPFDTAFFL*SSYLRGCLEAP
Trigger: AGGAGCCTCTAGACAGCCCCGGAGGTAGGAGGACAACAGGAAGAATGCAGTGTCAAAAGGGCAGAATGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528046.5
CDS CAA 90 bp TTCCTGTTGTCCTCCTACCTCCGGGGCTGTCTAGAGGCTCCTTTATaGTGCACTCCTCTGCCTTCTGTCTTACTTGTCAGAGTGCCTCAA +
Preference number: 6 (lower is better)
Translates to: FLLSSYLRGCLEAPL*CTPLPSVLLVRVPQ
Trigger: TTGAGGCACTCTGACAAGTAAGACAGAAGGCAGAGGAGTGCACAATAAAGGAGCCTCTAGACAGCCCCGGAGGTAGGAGGACAACAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528046.5
CDS TCA 72 bp AGCCATGCTTTTGGTTGCGCTGGCCAAGCCATAAATTaGTTCCTGGGGGAAGGTTGGTATCTGGAGGGTCTA +
Preference number: 6 (lower is better)
Translates to: SHAFGCAGQAIN*FLGEGWYLEGL
Trigger: TAGACCCTCCAGATACCAACCTTCCCCCAGGAATCAATTTATGGCTTGGCCAGCGCAACCAAAAGCATGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000524738.1
ENST00000527873.5
ENST00000529595.1
ENST00000532434.5
CDS TCA 72 bp CAGCAATCTACCTCTCCTTCCAGACACCGACACTGCTaGCAGCTATGGGTCCAATTGTCTCCACTTCGATAC +
Preference number: 6 (lower is better)
Translates to: QQSTSPSRHRHC*QLWVQLSPLRY
Trigger: GTATCGAAGTGGAGACAATTGGACCCATAGCTGTCAGCAGTGTCGGTGTCTGGAAGGAGAGGTAGATTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000529218.5
ENST00000532434.5
CDS TCA 72 bp CCAGCATTCTCACCACTTTCTCGCAGTGGCTTCCTGTaGATCCAGATGGACAGACACATTTGTTGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: PAFSPLSRSGFL*IQMDRHICWEP
Trigger: TGGCTCCCAACAAATGTGTCTGTCCATCTGGATTCACAGGAAGCCACTGCGAGAAAGTGGTGAGAATGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534263.1
CDS GCA 72 bp CTTGTGCCATTGTCCATCTGCCATGCGGTAAGGAAGTaGCTCTGTCCTTGGCTTCCCATTGTGTATGTAGTG +
Preference number: 6 (lower is better)
Translates to: LVPLSICHAVRK*LCPWLPIVYVV
Trigger: CACTACATACACAATGGGAAGCCAAGGACAGAGGCACTTCCTTACCGCATGGCAGATGGACAATGGCACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000357134.10
ENST00000527873.5
ENST00000529595.1
ENST00000532434.5
CDS GCA 72 bp GGCATTCCACGGCACCACTTTTGCAAGTGCAGTTCCTaGAATGGTCACCATCTACCCAAGAGTCTTGATCTC +
Preference number: 6 (lower is better)
Translates to: GIPRHHFCKCSS*NGHHLPKSLDL
Trigger: GAGATCAAGACTCTTGGGTAGATGGTGACCATTGCAGGAACTGCACTTGCAAAAGTGGTGCCGTGGAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000528495.1
ENST00000532434.5
CDS GCA 72 bp CACATTTGTTGGGAGCCACACACGTTCCACCGTATCTaGAGCCCTCTTCACAGAAAGTGCATTGTGGCATTC +
Preference number: 6 (lower is better)
Translates to: HICWEPHTFHRI*SPLHRKCIVAF
Trigger: GAATGCCACAATGCACTTTCTGTGAAGAGGGCTGCAGATACGGTGGAACGTGTGTGGCTCCCAACAAATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529218.5
ENST00000534263.1
CDS CAA 72 bp AAGCCATGCTTTTGGTTGCGCTGGCCAAGCCATAAATaGATTCCTGGGGGAAGGTTGGTATCTGGAGGGTCT +
Preference number: 6 (lower is better)
Translates to: KPCFWLRWPSHK*IPGGRLVSGGS
Trigger: AGACCCTCCAGATACCAACCTTCCCCCAGGAATCAATTTATGGCTTGGCCAGCGCAACCAAAAGCATGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000524738.1
ENST00000527873.5
ENST00000529595.1
ENST00000532434.5
CDS CAA 72 bp TGGTGTCACATTCTGGGCAACAGAATAGGTCAGCACTaGGATTCTGGCAATCACAAGCTGTCCGTCGGCAGA +
Preference number: 6 (lower is better)
Translates to: WCHILGNRIGQH*DSGNHKLSVGR
Trigger: TCTGCCGACGGACAGCTTGTGATTGCCAGAATCCAAGTGCTGACCTATTCTGTTGCCCAGAATGTGACACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000529218.5
ENST00000532434.5
CDS CAA 90 bp TGTGCCATTGTCCATCTGCCATGCGGTAAGGAAGTGCCTCTGTCCTaGGCTTCCCATTGTGTATGTAGTGATACCGAATCTCATCCCTCA +
Preference number: 6 (lower is better)
Translates to: CAIVHLPCGKEVPLS*ASHCVCSDTESHPS
Trigger: TGAGGGATGAGATTCGGTATCACTACATACACAATGGGAAGCCAAGGACAGAGGCACTTCCTTACCGCATGGCAGATGGACAATGGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000357134.10
ENST00000527873.5
ENST00000529595.1
ENST00000532434.5
CDS CAA 90 bp CCTTTGAATAAGCCATGCTTTTGGTTGCGCTGGCCAAGCCATAAATaGATTCCTGGGGGAAGGTTGGTATCTGGAGGGTCTATCACACGC +
Preference number: 6 (lower is better)
Translates to: PLNKPCFWLRWPSHK*IPGGRLVSGGSITR
Trigger: GCGTGTGATAGACCCTCCAGATACCAACCTTCCCCCAGGAATCAATTTATGGCTTGGCCAGCGCAACCAAAAGCATGGCTTATTCAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000527873.5
ENST00000529595.1
ENST00000532434.5
CDS CAA 90 bp GGACAACATTCCCCTTCTAAGATAGCTGTATACTCACAGCTCAAGTaGGGGCAAGTGAGTGGCCAGCAATCTACCTCTCCTTCCAGACAC +
Preference number: 6 (lower is better)
Translates to: GQHSPSKIAVYSQLK*GQVSGQQSTSPSRH
Trigger: GTGTCTGGAAGGAGAGGTAGATTGCTGGCCACTCACTTGCCCCAACTTGAGCTGTGAGTATACAGCTATCTTAGAAGGGGAATGTTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000529218.5
ENST00000532434.5
CDS CCA 72 bp TCCATCTGCCATGCGGTAAGGAAGTGCCTCTGTCCTTaGCTTCCCATTGTGTATGTAGTGATACCGAATCTC +
Preference number: 6 (lower is better)
Translates to: SICHAVRKCLCP*LPIVYVVIPNL
Trigger: GAGATTCGGTATCACTACATACACAATGGGAAGCCAAGGACAGAGGCACTTCCTTACCGCATGGCAGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000357134.10
ENST00000527873.5
ENST00000529595.1
ENST00000532434.5
CDS CCA 72 bp AATGTCTTTCTCGCAGTGGCTTCCTGTGAATCCAGATaGACAGACACATTTGTTGGGAGCCACACACGTTCC +
Preference number: 6 (lower is better)
Translates to: NVFLAVASCESR*TDTFVGSHTRS
Trigger: GGAACGTGTGTGGCTCCCAACAAATGTGTCTGTCCATCTGGATTCACAGGAAGCCACTGCGAGAAAGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532434.5
CDS CAA 72 bp GTCCATCTGCCATGCGGTAAGGAAGTGCCTCTGTCCTaGGCTTCCCATTGTGTATGTAGTGATACCGAATCT +
Preference number: 6 (lower is better)
Translates to: VHLPCGKEVPLS*ASHCVCSDTES
Trigger: AGATTCGGTATCACTACATACACAATGGGAAGCCAAGGACAGAGGCACTTCCTTACCGCATGGCAGATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000357134.10
ENST00000527873.5
ENST00000529595.1
ENST00000532434.5
CDS CAA 72 bp CAGAACAACAGACTCTTCCATTCTTGCATTTACAGGTaGTGCAGGGAGATCCAGCCATCGTCCACACTGAGC +
Preference number: 6 (lower is better)
Translates to: QNNRLFHSCIYR*CREIQPSSTLS
Trigger: GCTCAGTGTGGACGATGGCTGGATCTCCCTGCACAACCTGTAAATGCAAGAATGGAAGAGTCTGTTGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000529218.5
ENST00000532434.5
CDS CAA 90 bp AAATCCGCTGGCCTTCTGCAAGAACTTTTCCTCCATAGATACATTTaGCCTCTGCCCCCAGACACTGTCTTTGTTCAGGCTGTCGTCATC +
Preference number: 6 (lower is better)
Translates to: KSAGLLQELFLHRYI*PLPPDTVFVQAVVI
Trigger: GATGACGACAGCCTGAACAAAGACAGTGTCTGGGGGCAGAGGCAAAATGTATCTATGGAGGAAAAGTTCTTGCAGAAGGCCAGCGGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530672.1
CDS TCA 72 bp AAAAATGCTTTGCTGGCATTGTGCATTCCAGACACCTaGGCAACTCCAAGGGTGGTGTTCACAAGGTCAAGC +
Preference number: 6 (lower is better)
Translates to: KNALLALCIPDT*ATPRVVFTRSS
Trigger: GCTTGACCTTGTGAACACCACCCTTGGAGTTGCTCAGGTGTCTGGAATGCACAATGCCAGCAAAGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000532434.5
CDS TCA 72 bp GCAGCGGGAATGGTTGTGGCACTCAATGATTCCCTCTaGACATTCATCAATATCTTTCTCGCAGTGGCTTCC +
Preference number: 6 (lower is better)
Translates to: AAGMVVALNDSL*TFINIFLAVAS
Trigger: GGAAGCCACTGCGAGAAAGATATTGATGAATGTTCAGAGGGAATCATTGAGTGCCACAACCATTCCCGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000529218.5
CDS TCA 72 bp CTACATTGTGCCAAAGTTAATGGCCAGACGGTGGCCTaGCCACTAAGTGAACCCTTGGTAACTTCCCAAACA +
Preference number: 6 (lower is better)
Translates to: LHCAKVNGQTVA*PLSEPLVTSQT
Trigger: TGTTTGGGAAGTTACCAAGGGTTCACTTAGTGGTCAGGCCACCGTCTGGCCATTAACTTTGGCACAATGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528046.5
CDS GCA 72 bp GTATGTAGTGATACCGAATCTCATCCCTCAGGCCACTaGTCTCCAGTTCAAAATAGCTGTGCTCCAGTTCTC +
Preference number: 6 (lower is better)
Translates to: VCSDTESHPSGH*SPVQNSCAPVL
Trigger: GAGAACTGGAGCACAGCTATTTTGAACTGGAGAGCAGTGGCCTGAGGGATGAGATTCGGTATCACTACATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298925.9
ENST00000357134.10
ENST00000527873.5
ENST00000528046.5
ENST00000529595.1
ENST00000532434.5
CDS GCA 72 bp ATCCCAGGAGTAGCCAAGAATGGTAGGTTGGAAAATTaGCTTCACAGAGCCACTGGCTACTGTCAGCATCTT +
Preference number: 6 (lower is better)
Translates to: IPGVAKNGRLEN*LHRATGYCQHL
Trigger: AAGATGCTGACAGTAGCCAGTGGCTCTGTGAAGGCAATTTTCCAACCTACCATTCTTGGCTACTCCTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529218.5
ENST00000534263.1
CDS CCA 72 bp AATATCTTTCTCGCAGTGGCTTCCTGTGAATCCAGATaGACAGACACATTTGTTGGGAGCCACACACGTTCC +
Preference number: 6 (lower is better)
Translates to: NIFLAVASCESR*TDTFVGSHTRS
Trigger: GGAACGTGTGTGGCTCCCAACAAATGTGTCTGTCCATCTGGATTCACAGGAAGCCACTGCGAGAAAGATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000529218.5
CDS CCA 72 bp TACCACCCTGGCAGGTTAACGCAGCGGGAATGGTTGTaGCACTCAATGATTCCCTCTGAACATTCATCAATA +
Preference number: 6 (lower is better)
Translates to: YHPGRLTQREWL*HSMIPSEHSSI
Trigger: TATTGATGAATGTTCAGAGGGAATCATTGAGTGCCACAACCATTCCCGCTGCGTTAACCTGCCAGGGTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000529218.5
CDS CCA 72 bp CATTCTGGGCAACAGAATAGGTCAGCACTTGGATTCTaGCAATCACAAGCTGTCCGTCGGCAGAATATCTTG +
Preference number: 6 (lower is better)
Translates to: HSGQQNRSALGF*QSQAVRRQNIL
Trigger: CAAGATATTCTGCCGACGGACAGCTTGTGATTGCCAGAATCCAAGTGCTGACCTATTCTGTTGCCCAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000529218.5
ENST00000532434.5
CDS CCA 72 bp TCACACGCTCATAAATCCTGTGCTCCAGTTCTCGAATaGACAGTATCACTCCTGAAGTGGATGGCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: SHAHKSCAPVLE*TVSLLKWMASA
Trigger: AGCAGAAGCCATCCACTTCAGGAGTGATACTGTCCATTCGAGAACTGGAGCACAGGATTTATGAGCGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325319.9
ENST00000524738.1
CDS CAA 90 bp TTTGCAAGTGCAGTTCCTGCAATGGTCACCATCTACCCAAGAGTCTaGATCTCGATAGAGCAGTCCACTCACTTGACAAGTCTTCTCACA +
Preference number: 6 (lower is better)
Translates to: FASAVPAMVTIYPRV*ISIEQSTHLTSLLT
Trigger: TGTGAGAAGACTTGTCAAGTGAGTGGACTGCTCTATCGAGATCAAGACTCTTGGGTAGATGGTGACCATTGCAGGAACTGCACTTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000528495.1
ENST00000532434.5
CDS CAA 90 bp AGTGAACCCTTGGTAACTTCCCAAACAGTCGTGCTCTGCCTCCTTTaGAAACATTCTGCCCTTTTGACACTGCATTCTTCCTGTTGTCCT +
Preference number: 6 (lower is better)
Translates to: SEPLVTSQTVVLCLL*KHSALLTLHSSCCP
Trigger: AGGACAACAGGAAGAATGCAGTGTCAAAAGGGCAGAATGTTTCAAAAGGAGGCAGAGCACGACTGTTTGGGAAGTTACCAAGGGTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528046.5
CDS CAA 90 bp ATCTTCTGGGCCAGCTGGAAGGCATATTCAGCAATGCACAAAGACTaGGCCTTAGTCATGATCTTTAGGCTCTCTGTCACTCCTTTCACA +
Preference number: 6 (lower is better)
Translates to: IFWASWKAYSAMHKD*ALVMIFRLSVTPFT
Trigger: TGTGAAAGGAGTGACAGAGAGCCTAAAGATCATGACTAAGGCCAAGTCTTTGTGCATTGCTGAATATGCCTTCCAGCTGGCCCAGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529218.5
ENST00000534263.1
CDS TCA 72 bp CTGGGACACAGTCACAGCGATATAACCCAGGAAGGTTaGCACACACAGTATTGGCATGACAGTAATGCATCT +
Preference number: 6 (lower is better)
Translates to: LGHSHSDITQEG*HTQYWHDSNAS
Trigger: AGATGCATTACTGTCATGCCAATACTGTGTGTGTCAACCTTCCTGGGTTATATCGCTGTGACTGTGTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000530672.1
ENST00000532434.5
CDS TCA 72 bp TGGCATAGAGATCTAGGGTGGTATGCAACATGTTGTTaGAGGATTTGTATGATGGTGGCAGGGTGTCGTCAG +
Preference number: 6 (lower is better)
Translates to: WHRDLGWYATCC*RICMMVAGCRQ
Trigger: CTGACGACACCCTGCCACCATCATACAAATCCTTCAACAACATGTTGCATACCACCCTAGATCTCTATGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529218.5
ENST00000534263.1
CDS TCA 72 bp CACATTCATCAATGTCTTTCTCGCAGTGGCTTCCTGTaGATCCAGATGGACAGACACATTTGTTGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: HIHQCLSRSGFL*IQMDRHICWEP
Trigger: TGGCTCCCAACAAATGTGTCTGTCCATCTGGATTCACAGGAAGCCACTGCGAGAAAGACATTGATGAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532434.5
CDS TCA 72 bp GCCAGGTTGATGCAGGCAGAATCGTTCCAACAGGTGTaGGTTCTTAAGGCACATTCATCAATGTCTTTCTCG +
Preference number: 6 (lower is better)
Translates to: ARLMQAESFQQV*VLKAHSSMSFS
Trigger: CGAGAAAGACATTGATGAATGTGCCTTAAGAACTCACACCTGTTGGAACGATTCTGCCTGCATCAACCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532434.5
CDS GCA 72 bp CGAATGGACAGTATCACTCCTGAAGTGGATGGCTTCTaGTGTACAGTGGCCAAAATGGTGAATTCACTCTTG +
Preference number: 6 (lower is better)
Translates to: RMDSITPEVDGF*CTVAKMVNSLL
Trigger: CAAGAGTGAATTCACCATTTTGGCCACTGTACAGCAGAAGCCATCCACTTCAGGAGTGATACTGTCCATTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000524738.1
ENST00000527873.5
ENST00000528046.5
ENST00000529595.1
ENST00000532434.5
CDS GCA 72 bp AGTGAACCCTTGGTAACTTCCCAAACAGTCGTGCTCTaGCTCCTTTTGAAACATTCTGCCCTTTTGACACTG +
Preference number: 6 (lower is better)
Translates to: SEPLVTSQTVVL*LLLKHSALLTL
Trigger: CAGTGTCAAAAGGGCAGAATGTTTCAAAAGGAGGCAGAGCACGACTGTTTGGGAAGTTACCAAGGGTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528046.5
CDS CCA 72 bp TCTCCAGTTCAAAATAGCTGTGCTCCAGTTCTCGAATaGACAGTATCACTCCTGAAGTGGATGGCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: SPVQNSCAPVLE*TVSLLKWMASA
Trigger: AGCAGAAGCCATCCACTTCAGGAGTGATACTGTCCATTCGAGAACTGGAGCACAGCTATTTTGAACTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298925.9
ENST00000357134.10
ENST00000527873.5
ENST00000528046.5
ENST00000529595.1
ENST00000532434.5
CDS CCA 72 bp ATGATCCCTTTGAATAAGCCATGCTTTTGGTTGCGCTaGCCAAGCCATAAATTGATTCCTGGGGGAAGGTTG +
Preference number: 6 (lower is better)
Translates to: MIPLNKPCFWLR*PSHKLIPGGRL
Trigger: CAACCTTCCCCCAGGAATCAATTTATGGCTTGGCCAGCGCAACCAAAAGCATGGCTTATTCAAAGGGATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000527873.5
ENST00000529595.1
ENST00000532434.5
CDS CCA 72 bp CCATCTTGGATGATCCCTTTGAATAAGCCATGCTTTTaGTTGCGCTGGCCAAGCCATAAATTGATTCCTGGG +
Preference number: 6 (lower is better)
Translates to: PSWMIPLNKPCF*LRWPSHKLIPG
Trigger: CCCAGGAATCAATTTATGGCTTGGCCAGCGCAACCAAAAGCATGGCTTATTCAAAGGGATCATCCAAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000527873.5
ENST00000529595.1
ENST00000532434.5
CDS CAA 72 bp TCTTGGATGATCCCTTTGAATAAGCCATGCTTTTGGTaGCGCTGGCCAAGCCATAAATTGATTCCTGGGGGA +
Preference number: 6 (lower is better)
Translates to: SWMIPLNKPCFW*RWPSHKLIPGG
Trigger: TCCCCCAGGAATCAATTTATGGCTTGGCCAGCGCAACCAAAAGCATGGCTTATTCAAAGGGATCATCCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000527873.5
ENST00000529595.1
ENST00000532434.5
CDS CAA 72 bp GCCAGCTGGAAGGCATATTCAGCAATGCACAAAGACTaGGCCTTAGTCATGATCTTTAGGCTCTCTGTCACT +
Preference number: 6 (lower is better)
Translates to: ASWKAYSAMHKD*ALVMIFRLSVT
Trigger: AGTGACAGAGAGCCTAAAGATCATGACTAAGGCCAAGTCTTTGTGCATTGCTGAATATGCCTTCCAGCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529218.5
ENST00000534263.1
CDS GCA 72 bp TCGGAATATTTATTAGACACTTATGTGCCAGTCTGTTaGAGTAAGCCCTGGAGAGCAAACAAGGTCCCTGCT +
Preference number: 6 (lower is better)
Translates to: SEYLLDTYVPVC*SKPWRANKVPA
Trigger: AGCAGGGACCTTGTTTGCTCTCCAGGGCTTACTGCAACAGACTGGCACATAAGTGTCTAATAAATATTCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534263.1
CDS CAA 72 bp TTTACTAAAACTCCACCTCGGCATTCCCGACAGCTCTaGGTTAAAATCCGCTGGCCTTCTGCAAGAACTTTT +
Preference number: 6 (lower is better)
Translates to: FTKTPPRHSRQL*VKIRWPSARTF
Trigger: AAAAGTTCTTGCAGAAGGCCAGCGGATTTTAACCAAGAGCTGTCGGGAATGCCGAGGTGGAGTTTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000530672.1
ENST00000532434.5
CDS CAA 72 bp TTGGTAACTTCCCAAACAGTCGTGCTCTGCCTCCTTTaGAAACATTCTGCCCTTTTGACACTGCATTCTTCC +
Preference number: 6 (lower is better)
Translates to: LVTSQTVVLCLL*KHSALLTLHSS
Trigger: GGAAGAATGCAGTGTCAAAAGGGCAGAATGTTTCAAAAGGAGGCAGAGCACGACTGTTTGGGAAGTTACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528046.5
CDS TCA 72 bp AACATTCATCAATATCTTTCTCGCAGTGGCTTCCTGTaGATCCAGATGGACAGACACATTTGTTGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: NIHQYLSRSGFL*IQMDRHICWEP
Trigger: TGGCTCCCAACAAATGTGTCTGTCCATCTGGATTCACAGGAAGCCACTGCGAGAAAGATATTGATGAATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000529218.5
CDS CAA 72 bp AGATCTAGGGTGGTATGCAACATGTTGTTGAAGGATTaGTATGATGGTGGCAGGGTGTCGTCAGTTTTAACG +
Preference number: 6 (lower is better)
Translates to: RSRVVCNMLLKD*YDGGRVSSVLT
Trigger: CGTTAAAACTGACGACACCCTGCCACCATCATACAAATCCTTCAACAACATGTTGCATACCACCCTAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529218.5
ENST00000534263.1
CDS TCA 72 bp TACTCTTCAAAGCCACACGGTTTCAATGAACTGCCATaGTGGCATTATGAATTTCCTCTTCATGTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: YSSKPHGFNELP*WHYEFPLHVRQ
Trigger: CTGCCTCACATGAAGAGGAAATTCATAATGCCATCATGGCAGTTCATTGAAACCGTGTGGCTTTGAAGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529218.5
ENST00000534263.1
CDS GCA 72 bp ATCTTGGCCAAAAGCTCTTGTAAATCCATTATTCCTTaGACCAGGCTTAAGAAATCACTGCAGGTTGGGCAA +
Preference number: 6 (lower is better)
Translates to: ILAKSSCKSIIP*TRLKKSLQVGQ
Trigger: TTGCCCAACCTGCAGTGATTTCTTAAGCCTGGTGCAAGGAATAATGGATTTACAAGAGCTTTTGGCCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000532434.5
CDS GCA 72 bp ACACACAGTATTGGCATGACAGTAATGCATCTTAGCTaGACACTCATCAATATCTTCACAGTAGGCAGAGTC +
Preference number: 6 (lower is better)
Translates to: THSIGMTVMHLS*TLINIFTVGRV
Trigger: GACTCTGCCTACTGTGAAGATATTGATGAGTGTGCAGCTAAGATGCATTACTGTCATGCCAATACTGTGTGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000530672.1
ENST00000532434.5
CDS CAA 72 bp CCAAGAGTCTTGATCTCGATAGAGCAGTCCACTCACTaGACAAGTCTTCTCACAATGACAGTTTTCCAATTG +
Preference number: 6 (lower is better)
Translates to: PRVLISIEQSTH*TSLLTMTVFQL
Trigger: CAATTGGAAAACTGTCATTGTGAGAAGACTTGTCAAGTGAGTGGACTGCTCTATCGAGATCAAGACTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000528495.1
ENST00000532434.5
CDS CAA 90 bp ACCATCTACCCAAGAGTCTTGATCTCGATAGAGCAGTCCACTCACTaGACAAGTCTTCTCACAATGACAGTTTTCCAATTGACTAAGTCT +
Preference number: 6 (lower is better)
Translates to: TIYPRVLISIEQSTH*TSLLTMTVFQLTKS
Trigger: AGACTTAGTCAATTGGAAAACTGTCATTGTGAGAAGACTTGTCAAGTGAGTGGACTGCTCTATCGAGATCAAGACTCTTGGGTAGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000528495.1
ENST00000532434.5
CDS CAA 90 bp GAGCCACTGGCTACTGTCAGCATCTTCAATACCAAAATCATGAAGTaGAGATCTATTCAATTGTGTGAAAAGCTGTGCTCTTTCTCTGGC +
Preference number: 6 (lower is better)
Translates to: EPLATVSIFNTKIMK*RSIQLCEKLCSFSG
Trigger: GCCAGAGAAAGAGCACAGCTTTTCACACAATTGAATAGATCTCAACTTCATGATTTTGGTATTGAAGATGCTGACAGTAGCCAGTGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529218.5
CDS GCA 72 bp AATCCATTATTCCTTGCACCAGGCTTAAGAAATCACTaGAGGTTGGGCAAGTGTGATTTAGATTTGGACACT +
Preference number: 6 (lower is better)
Translates to: NPLFLAPGLRNH*RLGKCDLDLDT
Trigger: AGTGTCCAAATCTAAATCACACTTGCCCAACCTGCAGTGATTTCTTAAGCCTGGTGCAAGGAATAATGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000527873.5
ENST00000532434.5
CDS GCA 72 bp CAGTCTGGAGAGAAATATCTGGCCAGTATTTTTAGCTaGACTGACCAATACCACCCACTCTTACAAATCTTA +
Preference number: 6 (lower is better)
Translates to: QSGEKYLASIFS*TDQYHPLLQIL
Trigger: TAAGATTTGTAAGAGTGGGTGGTATTGGTCAGTGCAGCTAAAAATACTGGCCAGATATTTCTCTCCAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528046.5
CDS GCA 72 bp ATGAAGTTGAGATCTATTCAATTGTGTGAAAAGCTGTaGTCTTTCTCTGGCTTTGAACTAGCTTCCTTGGGT +
Preference number: 6 (lower is better)
Translates to: MKLRSIQLCEKL*SFSGFELASLG
Trigger: ACCCAAGGAAGCTAGTTCAAAGCCAGAGAAAGAGCACAGCTTTTCACACAATTGAATAGATCTCAACTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529218.5
CDS CCA 72 bp GTCTTGTCTCTGCATAATTTAGTTTTGCAGTCATCTTaGCCAAAAGCTCTTGTAAATCCATTATTCCTTGCA +
Preference number: 6 (lower is better)
Translates to: VLSLHNLVLQSS*PKALVNPLFLA
Trigger: TGCAAGGAATAATGGATTTACAAGAGCTTTTGGCCAAGATGACTGCAAAACTAAATTATGCAGAGACAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298925.9
ENST00000325319.9
ENST00000357134.10
ENST00000532434.5
CDS CAA 72 bp GCTACTGTCAGCATCTTCAATACCAAAATCATGAAGTaGAGATCTATTCAATTGTGTGAAAAGCTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: ATVSIFNTKIMK*RSIQLCEKLCS
Trigger: AGAGCACAGCTTTTCACACAATTGAATAGATCTCAACTTCATGATTTTGGTATTGAAGATGCTGACAGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529218.5