RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NEK9 (Homo sapiens)

Ensembl gene IDs: ENSG00000119638

Ensembl transcript IDs: ENST00000238616.10, ENST00000553823.6, ENST00000553945.1, ENST00000554258.1, ENST00000555405.5, ENST00000555537.1, ENST00000555763.1, ENST00000555961.1, ENST00000556170.5, ENST00000557026.5, ENST00000557673.6, ENST00000676711.1, ENST00000677411.1, ENST00000677700.1, ENST00000678037.1, ENST00000678531.1, ENST00000678749.1

Found 1518 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AACCTCCACCTGCAGAGAGCTGCACGCACACGCAGGAGGAGTCAGTaGTGTTCCCTTCCCAGCACAGGTTACTGCAGGATTCAGCCGAGG +
Preference number: 1 (lower is better)
Translates to: NLHLQRAARTRRRSQ*CSLPSTGYCRIQPR
Trigger: CCTCGGCTGAATCCTGCAGTAACCTGTGCTGGGAAGGGAACACCACTGACTCCTCCTGCGTGTGCGTGCAGCTCTCTGCAGGTGGAGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR CCA 90 bp GCCGAGGCCATGAGGTACAGATATCAGAGCCATGTGGTCTCTCTGTaGGGGTCATTGCCAGGCGGCCATTACCACCATTGCCCCAGGCAA +
Preference number: 1 (lower is better)
Translates to: AEAMRYRYQSHVVSL*GSLPGGHYHHCPRQ
Trigger: TTGCCTGGGGCAATGGTGGTAATGGCCGCCTGGCAATGACCCCCACAGAGAGACCACATGGCTCTGATATCTGTACCTCATGGCCTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR CCA 90 bp GGTCCCAGTCTCCTGGGGGCTCTACAGGCTCAGGAGACTAGAGGCTaGGTCTACAGGAGTCTGTTCCCAGGAGGCACCAGGAATCTGAAT +
Preference number: 1 (lower is better)
Translates to: GPSLLGALQAQETRG*VYRSLFPGGTRNLN
Trigger: ATTCAGATTCCTGGTGCCTCCTGGGAACAGACTCCTGTAGACCCAGCCTCTAGTCTCCTGAGCCTGTAGAGCCCCCAGGAGACTGGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR TCA 90 bp CAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTaGTTCCAGCCCACTCCAACTTTACACTTCTCCCTCTCCCACCCA +
Preference number: 1 (lower is better)
Translates to: QTTSPLCRGHWAGHT*FQPTPTLHFSLSHP
Trigger: TGGGTGGGAGAGGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR GCA 90 bp TTAACACCAGACCCTGCAATCTCTCAACCTCCACCTGCAGAGAGCTaGACGCACACGCAGGAGGAGTCAGTGGTGTTCCCTTCCCAGCAC +
Preference number: 1 (lower is better)
Translates to: LTPDPAISQPPPAES*THTQEESVVFPSQH
Trigger: GTGCTGGGAAGGGAACACCACTGACTCCTCCTGCGTGTGCGTGCAGCTCTCTGCAGGTGGAGGTTGAGAGATTGCAGGGTCTGGTGTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR GCA 90 bp GCCAGACACTTTAACACCAGACCCTGCAATCTCTCAACCTCCACCTaGAGAGAGCTGCACGCACACGCAGGAGGAGTCAGTGGTGTTCCC +
Preference number: 1 (lower is better)
Translates to: ARHFNTRPCNLSTST*RELHAHAGGVSGVP
Trigger: GGGAACACCACTGACTCCTCCTGCGTGTGCGTGCAGCTCTCTGCAGGTGGAGGTTGAGAGATTGCAGGGTCTGGTGTTAAAGTGTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR TCA 90 bp TGCCTCCTTGCATGTTCACCCAAGTGTACAGTTCCTTCTCCACTGTaGCCACAGCAAAGTGGGTATTCCCTGCACAGACCTGCCGGGCAC +
Preference number: 1 (lower is better)
Translates to: CLLACSPKCTVPSPL*PQQSGYSLHRPAGH
Trigger: GTGCCCGGCAGGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAACTGTACACTTGGGTGAACATGCAAGGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR TCA 90 bp AGGAGCTGCTGGCCCCATTACTGTTCCCCATGGCCTCTGTGGGACTaGTTAAACCTTCCATTCCTCGGTCTGCTTCCATTGTTCCTCGGA +
Preference number: 1 (lower is better)
Translates to: RSCWPHYCSPWPLWD*LNLPFLGLLPLFLG
Trigger: TCCGAGGAACAATGGAAGCAGACCGAGGAATGGAAGGTTTAATCAGTCCCACAGAGGCCATGGGGAACAGTAATGGGGCCAGCAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR GCA 90 bp TTCTCCACTGTGACCACAGCAAAGTGGGTATTCCCTGCACAGACCTaGCGGGCACTACAGCCACTCTTGATAACATCCAGTTTCTGGGGG +
Preference number: 1 (lower is better)
Translates to: FSTVTTAKWVFPAQT*RALQPLLITSSFWG
Trigger: CCCCCAGAAACTGGATGTTATCAAGAGTGGCTGTAGTGCCCGGCAGGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCACAGTGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR TCA 90 bp CAGGTCCGGGACATGATGCAGAGATCCAAAAATAGGCCGAGGCCATaGGGTACAGATATCAGAGCCATGTGGTCTCTCTGTGGGGGTCAT +
Preference number: 1 (lower is better)
Translates to: QVRDMMQRSKNRPRP*GTDIRAMWSLCGGH
Trigger: ATGACCCCCACAGAGAGACCACATGGCTCTGATATCTGTACCTCATGGCCTCGGCCTATTTTTGGATCTCTGCATCATGTCCCGGACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR GCA 90 bp GTACAGTTCCTTCTCCACTGTGACCACAGCAAAGTGGGTATTCCCTaGACAGACCTGCCGGGCACTACAGCCACTCTTGATAACATCCAG +
Preference number: 1 (lower is better)
Translates to: VQFLLHCDHSKVGIP*TDLPGTTATLDNIQ
Trigger: CTGGATGTTATCAAGAGTGGCTGTAGTGCCCGGCAGGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAACTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR TCA 90 bp GAGTCCTTGCAGCTCTTCATAGGGCAGGGTATCTTTCTCAGATTCTaGAAACGCTGCACTGAGAGGAGATGGGCTGTCAGGCATGGGGAT +
Preference number: 1 (lower is better)
Translates to: ESLQLFIGQGIFLRF*KRCTERRWAVRHGD
Trigger: ATCCCCATGCCTGACAGCCCATCTCCTCTCAGTGCAGCGTTTTCAGAATCTGAGAAAGATACCCTGCCCTATGAAGAGCTGCAAGGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR GCA 90 bp GCATGGGTTCTAGCACTTCAGGGCCAGCAACTTTGTCCACCCCCATaGAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACCCTCAT +
Preference number: 1 (lower is better)
Translates to: AWVLALQGQQLCPPP*SHNNLIRRHRADPH
Trigger: ATGAGGGTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAGTTGCTGGCCCTGAAGTGCTAGAACCCATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
3UTR CCA 90 bp CAGCAGCCGGCCTCGCTCATCAATAGCAGCTGTGTGAGTCTTGCCTaGGGCAATGGTACGGATCTTATAAAAGGACAACTGTTTGGCCAA +
Preference number: 1 (lower is better)
Translates to: QQPASLINSSCVSLA*GNGTDLIKGQLFGQ
Trigger: TTGGCCAAACAGTTGTCCTTTTATAAGATCCGTACCATTGCCCCAGGCAAGACTCACACAGCTGCTATTGATGAGCGAGGCCGGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR TCA 90 bp TTCAGGGCCAGCAACTTTGTCCACCCCCATGCAGCCATAATAATCTaGTCCGAAGGCATAGAGCTGACCCTCATCAGTCACACAGACAGT +
Preference number: 1 (lower is better)
Translates to: FRASNFVHPHAAIII*SEGIELTLISHTDS
Trigger: ACTGTCTGTGTGACTGATGAGGGTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAGTTGCTGGCCCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
3UTR TCA 90 bp ACGATGAGAATGGTATGCCATCCACGGCAAGACAGGTCCGGGACATaGTGCAGAGATCCAAAAATAGGCCGAGGCCATGAGGTACAGATA +
Preference number: 1 (lower is better)
Translates to: TMRMVCHPRQDRSGT*CRDPKIGRGHEVQI
Trigger: TATCTGTACCTCATGGCCTCGGCCTATTTTTGGATCTCTGCATCATGTCCCGGACCTGTCTTGCCGTGGATGGCATACCATTCTCATCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR GCA 90 bp GCCACTCTCCAAATGTACAAGGAAAGTGCTTCAGAGCCTCTGCCTTaGGCTCCTTTTCTGCAAGTGAACAAAGCCAGGAAAGCTGCTCTC +
Preference number: 1 (lower is better)
Translates to: ATLQMYKESASEPLP*APFLQVNKARKAAL
Trigger: GAGAGCAGCTTTCCTGGCTTTGTTCACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGAAGCACTTTCCTTGTACATTTGGAGAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CCA 90 bp AAACCAAAGAAGATCCCATTGAACAGAGTTGCCTGTCCCGAGCAATaGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAG +
Preference number: 1 (lower is better)
Translates to: KPKKIPLNRVACPEQ*GSPQASAFMPPVLE
Trigger: CTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGGATCTTCTTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CCA 90 bp TTTTTCGAAACAAGCCCTAGATTGACTCCATCAGACATATTTTCCTaGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGC +
Preference number: 1 (lower is better)
Translates to: FFETSPRLTPSDIFS*TQGSQEGQTTSPLC
Trigger: GCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAATATGTCTGATGGAGTCAATCTAGGGCTTGTTTCGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CCA 90 bp ACTGCAGTCTCACTTGGCCTGCTTCACTTCTTTACCTTATCTGCCTaGTACCACAGGCACTTGGATTTGGGATCGCTGGATGTTAGTAAG +
Preference number: 1 (lower is better)
Translates to: TAVSLGLLHFFTLSA*YHRHLDLGSLDVSK
Trigger: CTTACTAACATCCAGCGATCCCAAATCCAAGTGCCTGTGGTACCAGGCAGATAAGGTAAAGAAGTGAAGCAGGCCAAGTGAGACTGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR TCA 90 bp CCCTCATCAGTCACACAGACAGTGAAATCATCACCACATGACACCTaGCGGATAGCTTTGCCTTGCAACTTTTCCACATGCTTTGGCTGT +
Preference number: 1 (lower is better)
Translates to: PSSVTQTVKSSPHDT*RIALPCNFSTCFGC
Trigger: ACAGCCAAAGCATGTGGAAAAGTTGCAAGGCAAAGCTATCCGTCAGGTGTCATGTGGTGATGATTTCACTGTCTGTGTGACTGATGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
3UTR TCA 90 bp GAGCTGACCCTCATCAGTCACACAGACAGTGAAATCATCACCACATaGCACCTGACGGATAGCTTTGCCTTGCAACTTTTCCACATGCTT +
Preference number: 1 (lower is better)
Translates to: ELTLISHTDSEIITT*HLTDSFALQLFHML
Trigger: AAGCATGTGGAAAAGTTGCAAGGCAAAGCTATCCGTCAGGTGTCATGTGGTGATGATTTCACTGTCTGTGTGACTGATGAGGGTCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
3UTR TCA 90 bp CTTCTACTTGGGGTTTGTGTTCCAAAGGAGCTTCAGAGGCCACTTTaGGTCCTTGCAGCTCTTCATAGGGCAGGGTATCTTTCTCAGATT +
Preference number: 1 (lower is better)
Translates to: LLLGVCVPKELQRPL*VLAALHRAGYLSQI
Trigger: AATCTGAGAAAGATACCCTGCCCTATGAAGAGCTGCAAGGACTCAAAGTGGCCTCTGAAGCTCCTTTGGAACACAAACCCCAAGTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR CCA 90 bp TGGGATATGGAACATCTCTTGAAAAACTGGAAGTTCTGGAAACACTaGGCCAGCAACCCGCATGGCACAAATTGGGTGGGGTTTAGAATC +
Preference number: 1 (lower is better)
Translates to: WDMEHLLKNWKFWKH*ASNPHGTNWVGFRI
Trigger: GATTCTAAACCCCACCCAATTTGTGCCATGCGGGTTGCTGGCCCAGTGTTTCCAGAACTTCCAGTTTTTCAAGAGATGTTCCATATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR GCA 90 bp AAACAATGGGAACATCAAACCAAAGAAGATCCCATTGAACAGAGTTaGCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTAT +
Preference number: 1 (lower is better)
Translates to: KQWEHQTKEDPIEQS*LSRAMGFSPSISLY
Trigger: ATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGGATCTTCTTTGGTTTGATGTTCCCATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CCA 90 bp TTTAAAAACTGGGATATGGAACATCTCTTGAAAAACTGGAAGTTCTaGAAACACTGGGCCAGCAACCCGCATGGCACAAATTGGGTGGGG +
Preference number: 1 (lower is better)
Translates to: FKNWDMEHLLKNWKF*KHWASNPHGTNWVG
Trigger: CCCCACCCAATTTGTGCCATGCGGGTTGCTGGCCCAGTGTTTCCAGAACTTCCAGTTTTTCAAGAGATGTTCCATATCCCAGTTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR TCA 90 bp ACTTTGCCTGACTGGGTCAACAGAAATGTCCCATCACAGCCACATTaGACTGCAACAATAATCAAGGCCTTGGGAACATCCACCTTTTGT +
Preference number: 1 (lower is better)
Translates to: TLPDWVNRNVPSQPH*TATIIKALGTSTFC
Trigger: ACAAAAGGTGGATGTTCCCAAGGCCTTGATTATTGTTGCAGTTCAATGTGGCTGTGATGGGACATTTCTGTTGACCCAGTCAGGCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR TCA 90 bp GGAACTTCATGGTATGCTTCATGGTTGATAATTCCCGACATGCACTaGTTCAGACCCAGCTTATTGAATTCATTGAGTCCACAGGCCAGC +
Preference number: 1 (lower is better)
Translates to: GTSWYASWLIIPDMH*FRPSLLNSLSPQAS
Trigger: GCTGGCCTGTGGACTCAATGAATTCAATAAGCTGGGTCTGAATCAGTGCATGTCGGGAATTATCAACCATGAAGCATACCATGAAGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR GCA 90 bp ATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACAAGGAAAGTaGTTCAGAGCCTCTGCCTTGCGCTCCTTTTCTGCAAGTGAACAA +
Preference number: 1 (lower is better)
Translates to: ILSKRQCHSPNVQGK*FRASALRSFSASEQ
Trigger: TTGTTCACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGAAGCACTTTCCTTGTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CCA 90 bp GGGAATGTAAACCAGTACATTGCAATAGATGGCAAGAGTAAGCTGTaGCCAAGGTCACAAAATGGCAACATGTGGATTGCTTTGCTCCAC +
Preference number: 1 (lower is better)
Translates to: GNVNQYIAIDGKSKL*PRSQNGNMWIALLH
Trigger: GTGGAGCAAAGCAATCCACATGTTGCCATTTTGTGACCTTGGCCACAGCTTACTCTTGCCATCTATTGCAATGTACTGGTTTACATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR CCA 90 bp CCAGATATCAGACTTGAAATTGTACTTTACTCCTTGACAGAGCTCTaGAGACATGTAATATGGGGTTCCCACAAGCGTCTCAGCCATGGA +
Preference number: 1 (lower is better)
Translates to: PDIRLEIVLYSLTEL*RHVIWGSHKRLSHG
Trigger: TCCATGGCTGAGACGCTTGTGGGAACCCCATATTACATGTCTCCAGAGCTCTGTCAAGGAGTAAAGTACAATTTCAAGTCTGATATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554258.1
3UTR GCA 90 bp TTCTTGTTCAACTTCTGCAGTTGGGTAAAAATCTGGAGGTTTTCTTaGTGTAGCTTCTGTTGTTCAGCCAGACACTTTAACACCAGACCC +
Preference number: 1 (lower is better)
Translates to: FLFNFCSWVKIWRFS*CSFCCSARHFNTRP
Trigger: GGGTCTGGTGTTAAAGTGTCTGGCTGAACAACAGAAGCTACAGCAAGAAAACCTCCAGATTTTTACCCAACTGCAGAAGTTGAACAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR CCA 90 bp GATCTGACATTTAAAAACTGGGATATGGAACATCTCTTGAAAAACTaGAAGTTCTGGAAACACTGGGCCAGCAACCCGCATGGCACAAAT +
Preference number: 1 (lower is better)
Translates to: DLTFKNWDMEHLLKN*KFWKHWASNPHGTN
Trigger: ATTTGTGCCATGCGGGTTGCTGGCCCAGTGTTTCCAGAACTTCCAGTTTTTCAAGAGATGTTCCATATCCCAGTTTTTAAATGTCAGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR GCA 90 bp AACAGCAATGTATGTAATGCAGCACAGCACCTTCTGGCCAATGTTTaGTTTCATTATCAATTTATCACTCTCCACAGCTACACAGGTGGT +
Preference number: 1 (lower is better)
Translates to: NSNVCNAAQHLLANV*FHYQFITLHSYTGG
Trigger: ACCACCTGTGTAGCTGTGGAGAGTGATAAATTGATAATGAAAGCAAACATTGGCCAGAAGGTGCTGTGCTGCATTACATACATTGCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR TCA 90 bp ATCAATTTATCACTCTCCACAGCTACACAGGTGGTAACAGAGATGTaGCATAGTGGAGTTTTTCTCCCTAATGTTCATCATTCTGTGAGG +
Preference number: 1 (lower is better)
Translates to: INLSLSTATQVVTEM*HSGVFLPNVHHSVR
Trigger: CCTCACAGAATGATGAACATTAGGGAGAAAAACTCCACTATGTCACATCTCTGTTACCACCTGTGTAGCTGTGGAGAGTGATAAATTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR CCA 90 bp TATATAAAGACTCACAGAATCAAAGATTCACGGAGGCTTAGAATCTaGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACT +
Preference number: 1 (lower is better)
Translates to: YIKTHRIKDSRRLRI*MFYPQRLRSMHRLT
Trigger: AGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCAGATTCTAAGCCTCCGTGAATCTTTGATTCTGTGAGTCTTTATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR GCA 90 bp ATACAGGGACATGACAGGTCAATCGGTCCTCAAGAAAATCAAAGTTaGATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACA +
Preference number: 1 (lower is better)
Translates to: IQGHDRSIGPQENQS*IYMLNQNPLLQFMT
Trigger: TGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACTTTGATTTTCTTGAGGACCGATTGACCTGTCATGTCCCTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CCA 90 bp GGATGTGTGACACAAAATACCACAGGAACATTTTACAAGGCTAGGTaGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAATACTTG +
Preference number: 1 (lower is better)
Translates to: GCVTQNTTGTFYKAR*KYKAHILKETIKYL
Trigger: CAAGTATTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAATGTTCCTGTGGTATTTTGTGTCACACATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CCA 90 bp TTCTTAAATTTTACACAGATAGAGCTATATAGCATGTACTCTTTGTaGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACT +
Preference number: 1 (lower is better)
Translates to: FLNFTQIELYSMYSL*LASFSAHNAYETIT
Trigger: AGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTATATAGCTCTATCTGTGTAAAATTTAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553823.6
3UTR-3UTR TCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGTGGGCGGGCCACACCTaGTTCCAGCCCACTCCAACT +
Preference number: 2 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMWAGHT*FQPTPT
Trigger: AGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCA...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGCTCTGTGGGGGTCATTaGCAGGCGGCCATTACCACC +
Preference number: 2 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMLCGGH*QAAITT
Trigger: GGTGGTAATGGCCGCCTGGCAATGACCCCCACAGAG...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCACAAAGCCAGGGCCATaGGGGCCCTTCCATTCTCCA +
Preference number: 2 (lower is better)
Translates to: GTHPPPALTFTPPSQQPATKPGP*GPFHSP
Trigger: TGGAGAATGGAAGGGCCCCCATGGCCCTGGCTTTGT...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGACTACTTCACCACTCTaGAGAGGACACTGGGCGGGC +
Preference number: 2 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMTTSPL*RGHWAG
Trigger: GCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGT...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGACTCCCAGGGTTTGGTaGTGGCTTTGGGCCACTCAG +
Preference number: 2 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMTPRVW*WLWATQ
Trigger: CTGAGTGGCCCAAAGCCAGCACCAAACCCTGGGAGT...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGGAGACCCTGATCACTTaGTTCCCACCAAGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMETLIT*FPPRGP
Trigger: GGGACCCCTTGGTGGGAAGCAAGTGATCAGGGTCTC...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR TCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGGGTGGGATCAACAGATaGGGTACAGAGCTGCTGTTG +
Preference number: 2 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGGGINR*GTELLL
Trigger: CAACAGCAGCTCTGTACCTCATCTGTTGATCCCACC...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCAGATGAACACCCAAACTaGCCCAGCCTCTCAGGCCTG +
Preference number: 2 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPDEHPN*PSLSGL
Trigger: CAGGCCTGAGAGGCTGGGTCAGTTTGGGTGTTCATC...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCAACTCCCAGGGTTTGGTaGTGGCTTTGGGCCACTCAG +
Preference number: 2 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPTPRVW*WLWATQ
Trigger: CTGAGTGGCCCAAAGCCAGCACCAAACCCTGGGAGT...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCGTCAGAACCACCACATaGTTATCTCCACAGGAGACC +
Preference number: 2 (lower is better)
Translates to: GTHPPPALTFTPPSQQPAVRTTT*LSPQET
Trigger: GGTCTCCTGTGGAGATAATCATGTGGTGGTTCTGAC...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR GCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGGATGAGGTACAGAGCTaGTGTTGCTATGGCAGTCAC +
Preference number: 2 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGDEVQS*CCYGSH
Trigger: GTGACTGCCATAGCAACAGCAGCTCTGTACCTCATC...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCGTTTGGTGCTGGCTTTaGGCCACTCAGGTAGGAAAA +
Preference number: 2 (lower is better)
Translates to: GTHPPPALTFTPPSQQPAVWCWL*ATQVGK
Trigger: TTTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAAC...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGTCGGTAAGTGTGCTGTaGAGTTCTTTGGGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMSVSVL*SSLGPS
Trigger: ACTGGGACCCAAAGAACTTCACAGCACACTTACCGA...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGAGTGGTTGGGGCTGCTaGTATCAAGATCAGAACCCT +
Preference number: 2 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMSGWGC*YQDQNP
Trigger: AGGGTTCTGATCTTGATATCAGCAGCCCCAACCACT...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCTGGGCGGGCCACACCTaGTTCCAGCCCACTCCAACT +
Preference number: 2 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTWAGHT*FQPTPT
Trigger: AGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCA...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACATGGGCGGGCCACACCTaGTTCCAGCCCACTCCAACT +
Preference number: 2 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETWAGHT*FQPTPT
Trigger: AGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCA...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCGCTGCACAGAGTAACTaGACTTTTTCGAAACAAGCC +
Preference number: 2 (lower is better)
Translates to: GTHPPPALTFTPPSQQPAAAQSN*TFSKQA
Trigger: GGCTTGTTTCGAAAAAGTTCAGTTACTCTGTGCAGC...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGCTCTTAAGGCTATTCTaGCTGCCCCATGGACTCAAT +
Preference number: 2 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMLLRLF*LPHGLN
Trigger: ATTGAGTCCATGGGGCAGTCAGAATAGCCTTAAGAG...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTCTCCATGGCCCAGCTaGCCATGGAGTTTAGTGCCT +
Preference number: 2 (lower is better)
Translates to: CLSRAMGFSPSISLYATSSPWPS*PWSLVP
Trigger: AGGCACTAAACTCCATGGTCAGCTGGGCCATGGAGA...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGAGAGAAGTTGTAACTTaGCTGTGCTATGCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMREVVT*LCYARE
Trigger: CTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCT...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR CCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGGGCTTCCCAAAGTGCTaGGATTGTAGACATGAACCA +
Preference number: 2 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMGFPKC*DCRHEP
Trigger: TGGTTCATGTCTACAATCCCAGCACTTTGGGAAGCC...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR TCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCTCGGTAAGTGTGCTGTaGAGTTCTTTGGGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPSVSVL*SSLGPS
Trigger: ACTGGGACCCAAAGAACTTCACAGCACACTTACCGA...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGTACTCCATCCCCCTTTaGACTGGTTTCTGTTTGCAT +
Preference number: 2 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMYSIPL*TGFCLH
Trigger: ATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTA...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTCACCACATGACACCTaGCGGATAGCTTTGCCTTGC +
Preference number: 2 (lower is better)
Translates to: CLSRAMGFSPSISLYATSSPHDT*RIALPC
Trigger: GCAAGGCAAAGCTATCCGTCAGGTGTCATGTGGTGA...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR GCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGATGAGGTACAGAGCTaGTGTTGCTATGGCAGTCAC +
Preference number: 2 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTDEVQS*CCYGSH
Trigger: GTGACTGCCATAGCAACAGCAGCTCTGTACCTCATC...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp CTGGGGGCTCTACAGGCTCAGGAGACTAGAGGCTGGGTCTACAGGAGTCTGTTCGTTTGGTGCTGGCTTTaGGCCACTCAGGTAGGAAAA +
Preference number: 2 (lower is better)
Translates to: LGALQAQETRGWVYRSLFVWCWL*ATQVGK
Trigger: TTTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAAC...GAACAGACTCCTGTAGACCCAGCCTCTAGTCTCCTGAGCCTGTAGAGCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATCCCAGGGTTTGGTGCTaGCTTTGGGCCACTCAGGTA +
Preference number: 2 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHPRVWC*LWATQV
Trigger: TACCTGAGTGGCCCAAAGCCAGCACCAAACCCTGGG...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTGGGACTCCCAGGGTTTaGTGCTGGCTTTGGGCCACT +
Preference number: 2 (lower is better)
Translates to: SSMAEAILMMNTQTDPASGTPRV*CWLWAT
Trigger: AGTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCC...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGTCTTGCCTGGGGCAATaGTACGGATCTTATAAAAGG +
Preference number: 2 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMSCLGQ*YGSYKR
Trigger: CCTTTTATAAGATCCGTACCATTGCCCCAGGCAAGA...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR CAA 90 bp GCTCCTCCAGATGGGAATGGTAGCACCAGACCACTGCAGTCTCACTaGGCCTGCTTCACTTCTTTACCTTATCTGCCTGGTACCACAGGC +
Preference number: 2 (lower is better)
Translates to: APPDGNGSTRPLQSH*ACFTSLPYLPGTTG
Trigger: GCCTGTGGTACCAGGCAGATAAGGTAAAGAAGTGAAGCAGGCCAAGTGAGACTGCAGTGGTCTGGTGCTACCATTCCCATCTGGAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR-3UTR TCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTCGGTAAGTGTGCTGTaGAGTTCTTTGGGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: CLSRAMGFSPSISLYATSSVSVL*SSLGPS
Trigger: ACTGGGACCCAAAGAACTTCACAGCACACTTACCGA...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAATGGGCGGGCCACACCTaGTTCCAGCCCACTCCAACT +
Preference number: 2 (lower is better)
Translates to: GFSPSISLYATSFGEMAKWAGHT*FQPTPT
Trigger: AGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCA...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACATGGACTCAATTCTCTaGGACACCTCATCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHMDSIL*DTSSLR
Trigger: TCTGAGGGATGAGGTGTCTCAGAGAATTGAGTCCAT...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATTCATGGGCAGAAGACTaGGAGCCCTCTAAGCCCTCT +
Preference number: 2 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHSWAED*EPSKPS
Trigger: AGAGGGCTTAGAGGGCTCTCAGTCTTCTGCCCATGA...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGGTTGCATTTACATGCTaGACCAAAACCCACTGTTAC +
Preference number: 2 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMVAFTC*TKTHCY
Trigger: GTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAAC...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCAGAAATCATCACCACATaGCACCTGACGGATAGCTTT +
Preference number: 2 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPEIITT*HLTDSF
Trigger: AAAGCTATCCGTCAGGTGTCATGTGGTGATGATTTC...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR TCA 90 bp TTCTGCATTTTCCAGCTCCTTTCGAAGCCAGCCAGGACAGGAGCTGCTGGCCCCCCCCAGGCAAAAATGTaGTTATCATCAGTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: FCIFQLLSKPARTGAAGPPQAKM*LSSVAA
Trigger: TGCTGCCACTGATGATAATCACATTTTTGCCTGGGG...GGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAA
54% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR GCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACCAAAGCCAGGAAAGCTaGTCTCTGCATTCGGTAAGT +
Preference number: 2 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHQSQES*SLHSVS
Trigger: ACTTACCGAATGCAGAGAGCAGCTTTCCTGGCTTTG...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCGATGAGGTACAGAGCTaGTGTTGCTATGGCAGTCAC +
Preference number: 2 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISDEVQS*CCYGSH
Trigger: GTGACTGCCATAGCAACAGCAGCTCTGTACCTCATC...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATTCTCCACAGGAGACCTaGTCCACTGGATTGCTGAGG +
Preference number: 2 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHSPQET*STGLLR
Trigger: CCTCAGCAATCCAGTGGAGCAGGTCTCCTGTGGAGA...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR GCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCGCTGCCCACACTTGTTaGAGCCAAAGGTCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTAAHTC*SQRSAA
Trigger: GGCTGCTGACCTTTGGCTGCAACAAGTGTGGGCAGC...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGTGCTGTGAAGTTCTTTaGGTCCCAGTCTCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALCCEVL*VPVSWG
Trigger: CCCCCAGGAGACTGGGACCCAAAGAACTTCACAGCA...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCAACAAAGCCAGGGCCATaGGGGCCCTTCCATTCTCCA +
Preference number: 2 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPTKPGP*GPFHSP
Trigger: TGGAGAATGGAAGGGCCCCCATGGCCCTGGCTTTGT...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACTCAGACATATTTTCCTaGACTCAGGGCTCCCAAGAG +
Preference number: 2 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHSDIFS*TQGSQE
Trigger: CTCTTGGGAGCCCTGAGTCCAGGAAAATATGTCTGA...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTAATCCCACCCTGCATTaGTCACAGCCTGAAACACCA +
Preference number: 2 (lower is better)
Translates to: CLSRAMGFSPSISLYATSNPTLH*SQPETP
Trigger: TGGTGTTTCAGGCTGTGACCAATGCAGGGTGGGATT...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp TACAGGAGTCTGTTCCCAGGAGGCACCAGGAATCTGAATCTAAGTCAGGCTTTGGGGACTCCCAGGGTTTaGTGCTGGCTTTGGGCCACT +
Preference number: 2 (lower is better)
Translates to: YRSLFPGGTRNLNLSQALGTPRV*CWLWAT
Trigger: AGTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCC...CAAAGCCTGACTTAGATTCAGATTCCTGGTGCCTCCTGGGAACAGACTCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCGCCTGTCCCGAGCAATaGGGTTCTCCCCAAGCATCA +
Preference number: 2 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTACPEQ*GSPQAS
Trigger: TGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGC...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTCTCTTAAGGCTATTCTaGCTGCCCCATGGACTCAAT +
Preference number: 2 (lower is better)
Translates to: CLSRAMGFSPSISLYATSLLRLF*LPHGLN
Trigger: ATTGAGTCCATGGGGCAGTCAGAATAGCCTTAAGAG...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCTCATGGGCAGAAGACTaGGAGCCCTCTAAGCCCTCT +
Preference number: 2 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTSWAED*EPSKPS
Trigger: AGAGGGCTTAGAGGGCTCTCAGTCTTCTGCCCATGA...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGAGTGGTTGGGGCTGCTaGTATCAAGATCAGAACCCT +
Preference number: 2 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGSGWGC*YQDQNP
Trigger: AGGGTTCTGATCTTGATATCAGCAGCCCCAACCACT...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGTGCTTTAAACTTCAGTaGAATGCTCAGCCAAGAGAA +
Preference number: 2 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMCFKLQ*NAQPRE
Trigger: TTCTCTTGGCTGAGCATTTCACTGAAGTTTAAAGCA...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR TCA 90 bp CACATGCTTTGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACCATGGTTCCTTCTCCACTGTaGCCACAGCAAAGTGGGTAT +
Preference number: 2 (lower is better)
Translates to: HMLWLSIGGFVSMAQLTMVPSPL*PQQSGY
Trigger: ATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAAC...CATGGTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCAAAGCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR-3UTR TCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATAGGTGGTGGTTGCAATaGGCCCAGATCATGCCATTG +
Preference number: 2 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHRWWLQ*AQIMPL
Trigger: CAATGGCATGATCTGGGCTCATTGCAACCACCACCT...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR TCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACACTGAAAACGCTGCACTaGGAGGAGATGGGCTGTCAG +
Preference number: 2 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETLKTLH*EEMGCQ
Trigger: CTGACAGCCCATCTCCTCTCAGTGCAGCGTTTTCAG...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR GCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTCAAAGCCAGGAAAGCTaGTCTCTGCATTCGGTAAGT +
Preference number: 2 (lower is better)
Translates to: CLSRAMGFSPSISLYATSQSQES*SLHSVS
Trigger: ACTTACCGAATGCAGAGAGCAGCTTTCCTGGCTTTG...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACAATGTACAAGGAAAGTaGTTCAGAGCCTCTGCCTTG +
Preference number: 2 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHNVQGK*FRASAL
Trigger: CAAGGCAGAGGCTCTGAAGCACTTTCCTTGTACATT...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCAAGTCCCCAGAACTTaGAACTTTAATCAAAGTTTG +
Preference number: 2 (lower is better)
Translates to: GTHPPPALTFTPPSQQPAQVPRT*NFNQSL
Trigger: CAAACTTTGATTAAAGTTGCAAGTTCTGGGGACTTG...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCATGTGCAGATGTCCCTTaGATTGTTTCTGTTCCAAGA +
Preference number: 2 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPCADVP*IVSVPR
Trigger: TCTTGGAACAGAAACAATGCAAGGGACATCTGCACA...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR GCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGAATGAGCCCAGATCATaGCATTGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALNEPRS*HCTPAW
Trigger: CCAGGCTGGAGTGCAATGGCATGATCTGGGCTCATT...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR GCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCATTCCATCTCTTCCTTTaGTGTCTGAGTTCCTTTGGA +
Preference number: 2 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPFHLFL*CLSSFG
Trigger: TCCAAAGGAACTCAGACAGCAAAGGAAGAGATGGAA...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACATGCTGTGAAGTTCTTTaGGTCCCAGTCTCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETCCEVL*VPVSWG
Trigger: CCCCCAGGAGACTGGGACCCAAAGAACTTCACAGCA...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACTCTCCTCTTCAAAGGTaGGATCAACAGATGAGGTAC +
Preference number: 2 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHSPLQR*DQQMRY
Trigger: GTACCTCATCTGTTGATCCCACCTTTGAAGAGGAGA...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCGCATTGGTCACAGCCTaGAACACCAGCTGTGTGATG +
Preference number: 2 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTALVTA*NTSCVM
Trigger: CATCACACAGCTGGTGTTTCAGGCTGTGACCAATGC...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTGCATTGGTCACAGCCTaGAACACCAGCTGTGTGATG +
Preference number: 2 (lower is better)
Translates to: SSMAEAILMMNTQTDPASALVTA*NTSCVM
Trigger: CATCACACAGCTGGTGTTTCAGGCTGTGACCAATGC...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTCACTGTTACAGTTTATaGCAACCCCCGCAAGTCCCC +
Preference number: 2 (lower is better)
Translates to: SSMAEAILMMNTQTDPASHCYSL*QPPQVP
Trigger: GGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTG...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACAGAGGATACAGGGACATaGCAGGTCAATCGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETEDTGT*QVNRSS
Trigger: TGAGGACCGATTGACCTGTCATGTCCCTGTATCCTC...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGCTTTTAAATTTATCTTaGTCTGGTCTCTGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMLLNLS*SGLWEE
Trigger: CTCTTCCCAGAGACCAGATCAAGATAAATTTAAAAG...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR-3UTR TCA 90 bp CCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACCCTCATTCACCACATGACACCTaGCGGATAGCTTTGCCTTGC +
Preference number: 2 (lower is better)
Translates to: PPPCSHNNLIRRHRADPHSPHDT*RIALPC
Trigger: GCAAGGCAAAGCTATCCGTCAGGTGTCATGTGGTGA...ATGAGGGTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
3UTR-3UTR TCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTGGCCAGCACTTTGCCTaGCTGGGTCAACAGAAATGT +
Preference number: 2 (lower is better)
Translates to: SSMAEAILMMNTQTDPASGQHFA*LGQQKC
Trigger: ACATTTCTGTTGACCCAGTCAGGCAAAGTGCTGGCC...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR GCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACATCAGAGCCTCTGCCTTaGGCTCCTTTTCTGCAAGTG +
Preference number: 2 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETSEPLP*APFLQV
Trigger: CACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGA...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACCTATCTAAAAGGCAATaGCACTCTCCAAATGTACAA +
Preference number: 2 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHLSKRQ*HSPNVQ
Trigger: TTGTACATTTGGAGAGTGGCATTGCCTTTTAGATAG...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp TTTCCACATGCTTTGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACATGGCCCGAATTCCTTaGACGATCTTCACACACAGG +
Preference number: 2 (lower is better)
Translates to: FPHALAVDRRLCLHGPADMARIP*TIFTHR
Trigger: CCTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCAT...GTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCAAAGCATGTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR-3UTR GCA 90 bp CACCCAAGTGTACAGTTCCTTCTCCACTGTGACCACAGCAAAGTGGGTATTCCCTCTGCAGTAGGTCTCTaGTCAGGATCCTGGTCAAGG +
Preference number: 2 (lower is better)
Translates to: HPSVQFLLHCDHSKVGIPSAVGL*SGSWSR
Trigger: CCTTGACCAGGATCCTGAGCAGAGACCTACTGCAGA...GGGAATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAACTGTACACTTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR-3UTR GCA 90 bp GCCCCAAGAATAGACTTCCTTGTTTCGTGTCAGAACCACCACATGATTATCTCCTTCCCTGCACAGACCTaGCGGGCACTACAGCCACTC +
Preference number: 2 (lower is better)
Translates to: APRIDFLVSCQNHHMIISFPAQT*RALQPL
Trigger: GAGTGGCTGTAGTGCCCGGCAGGTCTGTGCAGGGAA...GGAGATAATCATGTGGTGGTTCTGACACGAAACAAGGAAGTCTATTCTTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR-3UTR GCA 90 bp TACAGGAGTCTGTTCCCAGGAGGCACCAGGAATCTGAATCTAAGTCAGGCTTTGTCGGGAGGTGGTGGTTaGAATGAGCCCAGATCATGC +
Preference number: 2 (lower is better)
Translates to: YRSLFPGGTRNLNLSQALSGGGG*NEPRSC
Trigger: GCATGATCTGGGCTCATTGCAACCACCACCTCCCGA...CAAAGCCTGACTTAGATTCAGATTCCTGGTGCCTCCTGGGAACAGACTCCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAACAAAGCCAGGGCCATaGGGGCCCTTCCATTCTCCA +
Preference number: 2 (lower is better)
Translates to: PTVTVYDNPRKSPELATLTKPGP*GPFHSP
Trigger: TGGAGAATGGAAGGGCCCCCATGGCCCTGGCTTTGT...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGGAGCTGCTGTTGCTATaGCAGTCACTGATGACAAAG +
Preference number: 2 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQELLLL*QSLMTK
Trigger: CTTTGTCATCAGTGACTGCCATAGCAACAGCAGCTC...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGTCAGACATATTTTCCTaGACTCAGGGCTCCCAAGAG +
Preference number: 2 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGSDIFS*TQGSQE
Trigger: CTCTTGGGAGCCCTGAGTCCAGGAAAATATGTCTGA...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp TTCTGCATTTTCCAGCTCCTTTCGAAGCCAGCCAGGACAGGAGCTGCTGGCCCCCATTCAGAAAGAAAGTaGTTGGGGCTGCTGATATCA +
Preference number: 2 (lower is better)
Translates to: FCIFQLLSKPARTGAAGPHSERK*LGLLIS
Trigger: TGATATCAGCAGCCCCAACCACTTTCTTTCTGAATG...GGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCTCATTCGTTACCACATaGCTTCATAAAACACCAAAA +
Preference number: 2 (lower is better)
Translates to: GTHPPPALTFTPPSQQPASFVTT*LHKTPK
Trigger: TTTTGGTGTTTTATGAAGCCATGTGGTAACGAATGA...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGCCCAGGGTTTGGTGCTaGCTTTGGGCCACTCAGGTA +
Preference number: 2 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQPRVWC*LWATQV
Trigger: TACCTGAGTGGCCCAAAGCCAGCACCAAACCCTGGG...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTACCCAGGGTTTGGTGCTaGCTTTGGGCCACTCAGGTA +
Preference number: 2 (lower is better)
Translates to: PTVTVYDNPRKSPELATLPRVWC*LWATQV
Trigger: TACCTGAGTGGCCCAAAGCCAGCACCAAACCCTGGG...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGGTCCCAGGCACAATATaGGAAAGTGCAAACTGTCTC +
Preference number: 2 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGVPGTI*ESANCL
Trigger: GAGACAGTTTGCACTTTCCCATATTGTGCCTGGGAC...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp TCAGCTGCATGGGTTCTAGCACTTCAGGGCCAGCAACTTTGTCCACCCCCATGCATAACATCCAGTTTCTaGGGGGTGGATTTTCCACCA +
Preference number: 2 (lower is better)
Translates to: SAAWVLALQGQQLCPPPCITSSF*GVDFPP
Trigger: TGGTGGAAAATCCACCCCCCAGAAACTGGATGTTAT...GCATGGGGGTGGACAAAGTTGCTGGCCCTGAAGTGCTAGAACCCATGCAGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR CAA 90 bp GGCCTGCTTCACTTCTTTACCTTATCTGCCTGGTACCACAGGCACTaGGATTTGGGATCGCTGGATGTTAGTAAGGTCATAGATCCGGGC +
Preference number: 2 (lower is better)
Translates to: GLLHFFTLSAWYHRH*DLGSLDVSKVIDPG
Trigger: GCCCGGATCTATGACCTTACTAACATCCAGCGATCCCAAATCCAAGTGCCTGTGGTACCAGGCAGATAAGGTAAAGAAGTGAAGCAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR-3UTR TCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTATCATGGGCAGAAGACTaGGAGCCCTCTAAGCCCTCT +
Preference number: 2 (lower is better)
Translates to: PTVTVYDNPRKSPELATLSWAED*EPSKPS
Trigger: AGAGGGCTTAGAGGGCTCTCAGTCTTCTGCCCATGA...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTAGTGGTTGGGGCTGCTaGTATCAAGATCAGAACCCT +
Preference number: 2 (lower is better)
Translates to: SSMAEAILMMNTQTDPASSGWGC*YQDQNP
Trigger: AGGGTTCTGATCTTGATATCAGCAGCCCCAACCACT...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CGCATGGCACAAATTGGGTGGGGTTTAGAATCAGATGCTCCTCCAGATGGGAATCACTGTTACAGTTTATaGCAACCCCCGCAAGTCCCC +
Preference number: 2 (lower is better)
Translates to: RMAQIGWGLESDAPPDGNHCYSL*QPPQVP
Trigger: GGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTG...ATTCCCATCTGGAGGAGCATCTGATTCTAAACCCCACCCAATTTGTGCCATGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR-3UTR TCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCAGATGAACACCCAAACTaGCCCAGCCTCTCAGGCCTG +
Preference number: 2 (lower is better)
Translates to: PREVVTWLCYARETKFSSDEHPN*PSLSGL
Trigger: CAGGCCTGAGAGGCTGGGTCAGTTTGGGTGTTCATC...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR GCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGAATGTACAAGGAAAGTaGTTCAGAGCCTCTGCCTTG +
Preference number: 2 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGNVQGK*FRASAL
Trigger: CAAGGCAGAGGCTCTGAAGCACTTTCCTTGTACATT...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCTTCTCATTTAGGGGCTaGATGATGGGTTTAGATGCA +
Preference number: 2 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISFSFRG*MMGLDA
Trigger: TGCATCTAAACCCATCATGCAGCCCCTAAATGAGAA...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATGAGCTGCTGTTGCTATaGCAGTCACTGATGACAAAG +
Preference number: 2 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHELLLL*QSLMTK
Trigger: CTTTGTCATCAGTGACTGCCATAGCAACAGCAGCTC...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CAA 90 bp TGCCACTCTCCAAATGTACAAGGAAAGTGCTTCAGAGCCTCTGCCTaGCGCTCCTTTTCTGCAAGTGAACAAAGCCAGGAAAGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: CHSPNVQGKCFRASA*RSFSASEQSQESCS
Trigger: AGAGCAGCTTTCCTGGCTTTGTTCACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGAAGCACTTTCCTTGTACATTTGGAGAGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CAA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTaGGGCCACTCAGGTAGGAAAAATGATACAGATTCATTCGTTACC +
Preference number: 2 (lower is better)
Translates to: PVLLGFRDSQGLVLA*GHSGRKNDTDSFVT
Trigger: GGTAACGAATGAATCTGTATCATTTTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CAA 90 bp CTTCACTTCTTTACCTTATCTGCCTGGTACCACAGGCACTTGGATTaGGGATCGCTGGATGTTAGTAAGGTCATAGATCCGGGCCCTCCA +
Preference number: 2 (lower is better)
Translates to: LHFFTLSAWYHRHLD*GSLDVSKVIDPGPP
Trigger: TGGAGGGCCCGGATCTATGACCTTACTAACATCCAGCGATCCCAAATCCAAGTGCCTGTGGTACCAGGCAGATAAGGTAAAGAAGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR-3UTR TCA 90 bp TCGCTGGATGTTAGTAAGGTCATAGATCCGGGCCCTCCAGAGAGAACAAATTGTGGTGGGATCAACAGATaGGGTACAGAGCTGCTGTTG +
Preference number: 2 (lower is better)
Translates to: SLDVSKVIDPGPPERTNCGGINR*GTELLL
Trigger: CAACAGCAGCTCTGTACCTCATCTGTTGATCCCACC...ACAATTTGTTCTCTCTGGAGGGCCCGGATCTATGACCTTACTAACATCCAGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR-3UTR TCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAGGTGGGATCAACAGATaGGGTACAGAGCTGCTGTTG +
Preference number: 2 (lower is better)
Translates to: GFSPSISLYATSFGEMAKGGINR*GTELLL
Trigger: CAACAGCAGCTCTGTACCTCATCTGTTGATCCCACC...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGGGTGGGATCAACAGATaGGGTACAGAGCTGCTGTTG +
Preference number: 2 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQGGINR*GTELLL
Trigger: CAACAGCAGCTCTGTACCTCATCTGTTGATCCCACC...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATGCTGCACAGAGTAACTaGACTTTTTCGAAACAAGCC +
Preference number: 2 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHAAQSN*TFSKQA
Trigger: GGCTTGTTTCGAAAAAGTTCAGTTACTCTGTGCAGC...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp TCGCTGGATGTTAGTAAGGTCATAGATCCGGGCCCTCCAGAGAGAACAAATTGTGAGGATACAGGGACATaGCAGGTCAATCGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: SLDVSKVIDPGPPERTNCEDTGT*QVNRSS
Trigger: TGAGGACCGATTGACCTGTCATGTCCCTGTATCCTC...ACAATTTGTTCTCTCTGGAGGGCCCGGATCTATGACCTTACTAACATCCAGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR-3UTR TCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCAGGAAAGGCTCCCCTATaGACAAGACCAGGGCACTCA +
Preference number: 2 (lower is better)
Translates to: PREVVTWLCYARETKFSSGKAPL*TRPGHS
Trigger: TGAGTGCCCTGGTCTTGTTCATAGGGGAGCCTTTCC...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR TCA 90 bp TTCGTGATGTTACTACAGCAATGGGTGCTTCAGTCACAGTGCTTGACCTTGGTCCTCTCCTGCGTTTCCTaGGAAGAGGGCGATCTAGAA +
Preference number: 2 (lower is better)
Translates to: FVMLLQQWVLQSQCLTLVLSCVS*EEGDLE
Trigger: TTCTAGATCGCCCTCTTCTCAGGAAACGCAGGAGAG...GACCAAGGTCAAGCACTGTGACTGAAGCACCCATTGCTGTAGTAACATCACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR-3UTR TCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGGCCTGGCCAGTGTGGTaGAACCCCATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQAWPVW*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCACACTGGCCAGGC...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR TCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTGTTTCAGATTCCTGCTaGCTGTCCTCTTCTTCACCA +
Preference number: 2 (lower is better)
Translates to: SSMAEAILMMNTQTDPASVSDSC*LSSSSP
Trigger: TGGTGAAGAAGAGGACAGTCAGCAGGAATCTGAAAC...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR GCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTCTATCTAAAAGGCAATaGCACTCTCCAAATGTACAA +
Preference number: 2 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTLSKRQ*HSPNVQ
Trigger: TTGTACATTTGGAGAGTGGCATTGCCTTTTAGATAG...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCGAGCTGCTGTTGCTATaGCAGTCACTGATGACAAAG +
Preference number: 2 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTELLLL*QSLMTK
Trigger: CTTTGTCATCAGTGACTGCCATAGCAACAGCAGCTC...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCTCAGACATATTTTCCTaGACTCAGGGCTCCCAAGAG +
Preference number: 2 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTSDIFS*TQGSQE
Trigger: CTCTTGGGAGCCCTGAGTCCAGGAAAATATGTCTGA...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACAGTCCCAGGCACAATATaGGAAAGTGCAAACTGTCTC +
Preference number: 2 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETVPGTI*ESANCL
Trigger: GAGACAGTTTGCACTTTCCCATATTGTGCCTGGGAC...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCTCATGGTATGCTTCATaGTTGATAATTCCCGACATG +
Preference number: 2 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISSWYAS*LIIPDM
Trigger: CATGTCGGGAATTATCAACCATGAAGCATACCATGA...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CCA 90 bp AGAATTCAATACTTTCTCAACGATGAGAATGGTATGCCATCCACGGCAAGACAGCATGTGGTCTCTCTGTaGGGGTCATTGCCAGGCGGC +
Preference number: 2 (lower is better)
Translates to: RIQYFLNDENGMPSTARQHVVSL*GSLPGG
Trigger: GCCGCCTGGCAATGACCCCCACAGAGAGACCACATG...CTGTCTTGCCGTGGATGGCATACCATTCTCATCGTTGAGAAAGTATTGAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR TCA 90 bp CGCATGGCACAAATTGGGTGGGGTTTAGAATCAGATGCTCCTCCAGATGGGAATATGGACTCAATTCTCTaGGACACCTCATCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: RMAQIGWGLESDAPPDGNMDSIL*DTSSLR
Trigger: TCTGAGGGATGAGGTGTCTCAGAGAATTGAGTCCAT...ATTCCCATCTGGAGGAGCATCTGATTCTAAACCCCACCCAATTTGTGCCATGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR-3UTR TCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAAGTGGTTGGGGCTGCTaGTATCAAGATCAGAACCCT +
Preference number: 2 (lower is better)
Translates to: GFSPSISLYATSFGEMAKSGWGC*YQDQNP
Trigger: AGGGTTCTGATCTTGATATCAGCAGCCCCAACCACT...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATGTTGCATTTACATGCTaGACCAAAACCCACTGTTAC +
Preference number: 2 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHVAFTC*TKTHCY
Trigger: GTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAAC...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTTACTCCATCCCCCTTTaGACTGGTTTCTGTTTGCAT +
Preference number: 2 (lower is better)
Translates to: SSMAEAILMMNTQTDPASYSIPL*TGFCLH
Trigger: ATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTA...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CTTTGTCCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACGACTTCACTGGTTCGTaGTGTTACTACAGCAATGGG +
Preference number: 2 (lower is better)
Translates to: LCPPPCSHNNLIRRHRADDFTGS*CYYSNG
Trigger: CCCATTGCTGTAGTAACATCACGAACCAGTGAAGTC...GTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR-3UTR GCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTATCTAAAAGGCAATaGCACTCTCCAAATGTACAA +
Preference number: 2 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISLSKRQ*HSPNVQ
Trigger: TTGTACATTTGGAGAGTGGCATTGCCTTTTAGATAG...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp TCAGCTGCATGGGTTCTAGCACTTCAGGGCCAGCAACTTTGTCCACCCCCATGCCTATCTAAAAGGCAATaGCACTCTCCAAATGTACAA +
Preference number: 2 (lower is better)
Translates to: SAAWVLALQGQQLCPPPCLSKRQ*HSPNVQ
Trigger: TTGTACATTTGGAGAGTGGCATTGCCTTTTAGATAG...GCATGGGGGTGGACAAAGTTGCTGGCCCTGAAGTGCTAGAACCCATGCAGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR GCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAGATGAGGTACAGAGCTaGTGTTGCTATGGCAGTCAC +
Preference number: 2 (lower is better)
Translates to: GFSPSISLYATSFGEMAKDEVQS*CCYGSH
Trigger: GTGACTGCCATAGCAACAGCAGCTCTGTACCTCATC...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAGATGAGGTACAGAGCTaGTGTTGCTATGGCAGTCAC +
Preference number: 2 (lower is better)
Translates to: PTVTVYDNPRKSPELATLDEVQS*CCYGSH
Trigger: GTGACTGCCATAGCAACAGCAGCTCTGTACCTCATC...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCAACCTTCTCAGCAACCTaGCCATGTCCATCAGCTCCA +
Preference number: 2 (lower is better)
Translates to: PREVVTWLCYARETKFSSTFSAT*PCPSAP
Trigger: TGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGGT...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR GCA 90 bp GTCTCCATGGCCCAGCTGACCATGGAGTTTAGTGCCTCCTTGCATGTTCACCCATGGTCTCTTTGTAGGTaGATTAAGCAGAGTGACTTT +
Preference number: 2 (lower is better)
Translates to: VSMAQLTMEFSASLHVHPWSLCR*IKQSDF
Trigger: AAAGTCACTCTGCTTAATGCACCTACAAAGAGACCA...TGGGTGAACATGCAAGGAGGCACTAAACTCCATGGTCAGCTGGGCCATGGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR-3UTR GCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGACGATGAGAATGGTATaGCATCCACGGCAAGACAGG +
Preference number: 2 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQTMRMV*HPRQDR
Trigger: CCTGTCTTGCCGTGGATGGCATACCATTCTCATCGT...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR GCA 90 bp TACAGGAGTCTGTTCCCAGGAGGCACCAGGAATCTGAATCTAAGTCAGGCTTTGTTCCATTCCTCGGTCTaGTTCCATTGTTCCTCGGAA +
Preference number: 2 (lower is better)
Translates to: YRSLFPGGTRNLNLSQALFHSSV*FHCSSE
Trigger: TTCCGAGGAACAATGGAAGCAGACCGAGGAATGGAA...CAAAGCCTGACTTAGATTCAGATTCCTGGTGCCTCCTGGGAACAGACTCCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACTCATTCGTTACCACATaGCTTCATAAAACACCAAAA +
Preference number: 2 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHSFVTT*LHKTPK
Trigger: TTTTGGTGTTTTATGAAGCCATGTGGTAACGAATGA...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGGTTTGGTGCTGGCTTTaGGCCACTCAGGTAGGAAAA +
Preference number: 2 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQVWCWL*ATQVGK
Trigger: TTTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAAC...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp TGGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTGAAGCACAGGTTTGGTGCTGGCTTTaGGCCACTCAGGTAGGAAAA +
Preference number: 2 (lower is better)
Translates to: WMFYPQRLRSMHRLTEAQVWCWL*ATQVGK
Trigger: TTTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAAC...CTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR CCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTGGGACTCCCAGGGTTTaGTGCTGGCTTTGGGCCACT +
Preference number: 2 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGGTPRV*CWLWAT
Trigger: AGTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCC...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCTTTTACAAGGCTAGGTaGAAATACAAAGCTCACATC +
Preference number: 2 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISFYKAR*KYKAHI
Trigger: GATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCCAGTTTTGGAGAAATaGCAAAATTTCCATTGCACA +
Preference number: 2 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISPVLEK*QNFHCT
Trigger: TGTGCAATGGAAATTTTGCCATTTCTCCAAAACTGG...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAGCCTGTCCCGAGCAATaGGGTTCTCCCCAAGCATCA +
Preference number: 2 (lower is better)
Translates to: PALSLFLTEEISINPQRKACPEQ*GSPQAS
Trigger: TGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGC...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp TGCACAGACCTGCCGGGCACTACAGCCACTCTTGATAACATCCAGTTTCTGGGGAATTCCAAAGAGTACTaGCTAGAGTCAACTTCCATG +
Preference number: 2 (lower is better)
Translates to: CTDLPGTTATLDNIQFLGNSKEY*LESTSM
Trigger: CATGGAAGTTGACTCTAGCCAGTACTCTTTGGAATT...CCCCAGAAACTGGATGTTATCAAGAGTGGCTGTAGTGCCCGGCAGGTCTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR CAA 90 bp AGTAGGTCTCTGCTCAGGATCCTGGTCAAGGCACGAATGAACCATTaGGATCAATTCCAAAGAGTACTGGCTAGAGTCAACTTCCATGGC +
Preference number: 2 (lower is better)
Translates to: SRSLLRILVKARMNH*DQFQRVLARVNFHG
Trigger: GCCATGGAAGTTGACTCTAGCCAGTACTCTTTGGAATTGATCCAAATGGTTCATTCGTGCCTTGACCAGGATCCTGAGCAGAGACCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR-3UTR TCA 90 bp ATTCCTTTTGCAAGTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTTCGGTAAGTGTGCTGTaGAGTTCTTTGGGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: IPFASSTCSVRLQGLPGFSVSVL*SSLGPS
Trigger: ACTGGGACCCAAAGAACTTCACAGCACACTTACCGA...AAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAATGGGCGGGCCACACCTaGTTCCAGCCCACTCCAACT +
Preference number: 2 (lower is better)
Translates to: FYKARWKYKAHILKETIKWAGHT*FQPTPT
Trigger: AGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCA...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp ATTCCTTTTGCAAGTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTAGTGGTTGGGGCTGCTaGTATCAAGATCAGAACCCT +
Preference number: 2 (lower is better)
Translates to: IPFASSTCSVRLQGLPGFSGWGC*YQDQNP
Trigger: AGGGTTCTGATCTTGATATCAGCAGCCCCAACCACT...AAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACAGTTGCATTTACATGCTaGACCAAAACCCACTGTTAC +
Preference number: 2 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETVAFTC*TKTHCY
Trigger: GTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAAC...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTGTGGTAACAGAGATGTaGCATAGTGGAGTTTTTCTC +
Preference number: 2 (lower is better)
Translates to: SSMAEAILMMNTQTDPASVVTEM*HSGVFL
Trigger: GAGAAAAACTCCACTATGTCACATCTCTGTTACCAC...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR-3UTR GCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTTGTGCAGATGTCCCTTaGATTGTTTCTGTTCCAAGA +
Preference number: 2 (lower is better)
Translates to: SSMAEAILMMNTQTDPASCADVP*IVSVPR
Trigger: TCTTGGAACAGAAACAATGCAAGGGACATCTGCACA...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR CCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAATGCTGTGAAGTTCTTTaGGTCCCAGTCTCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: PALSLFLTEEISINPQRKCCEVL*VPVSWG
Trigger: CCCCCAGGAGACTGGGACCCAAAGAACTTCACAGCA...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGTGAAAATGATACATaGGATATAAGCTGCTACCAG +
Preference number: 2 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALGENDT*DISCYQ
Trigger: CTGGTAGCAGCTTATATCCCATGTATCATTTTCACC...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCCATTCAGAAAGAAAGTaGTTGGGGCTGCTGATATCA +
Preference number: 2 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTHSERK*LGLLIS
Trigger: TGATATCAGCAGCCCCAACCACTTTCTTTCTGAATG...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGAGGGACTCCCAGGGTTTaGTGCTGGCTTTGGGCCACT +
Preference number: 2 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRGTPRV*CWLWAT
Trigger: AGTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCC...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR CCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTGCCTGTCCCGAGCAATaGGGTTCTCCCCAAGCATCA +
Preference number: 2 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGACPEQ*GSPQAS
Trigger: TGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGC...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCCCAGCGCAATTAAGGTaGGCACTGTGTCTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPPAQLR*ALCLLF
Trigger: GAAGAGGAGACACAGTGCTCACCTTAATTGCGCTGG...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAACCAGCGCAATTAAGGTaGGCACTGTGTCTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: PALSLFLTEEISINPQRKPAQLR*ALCLLF
Trigger: GAAGAGGAGACACAGTGCTCACCTTAATTGCGCTGG...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATAAACAAGCCCTAGATTaGCTCCATCAGACATATTTT +
Preference number: 2 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHKQALD*LHQTYF
Trigger: AAAATATGTCTGATGGAGTCAATCTAGGGCTTGTTT...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp TGGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTGAAGCACAGGCTGCACAGAGTAACTaGACTTTTTCGAAACAAGCC +
Preference number: 2 (lower is better)
Translates to: WMFYPQRLRSMHRLTEAQAAQSN*TFSKQA
Trigger: GGCTTGTTTCGAAAAAGTTCAGTTACTCTGTGCAGC...CTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR TCA 90 bp ATTCCTTTTGCAAGTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTATGGACTCAATTCTCTaGGACACCTCATCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: IPFASSTCSVRLQGLPGFMDSIL*DTSSLR
Trigger: TCTGAGGGATGAGGTGTCTCAGAGAATTGAGTCCAT...AAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAACACTGTTACAGTTTATaGCAACCCCCGCAAGTCCCC +
Preference number: 2 (lower is better)
Translates to: PALSLFLTEEISINPQRKHCYSL*QPPQVP
Trigger: GGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTG...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAGAGGATACAGGGACATaGCAGGTCAATCGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: PALSLFLTEEISINPQRKEDTGT*QVNRSS
Trigger: TGAGGACCGATTGACCTGTCATGTCCCTGTATCCTC...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTTGCTTTAAACTTCAGTaGAATGCTCAGCCAAGAGAA +
Preference number: 2 (lower is better)
Translates to: SSMAEAILMMNTQTDPASCFKLQ*NAQPRE
Trigger: TTCTCTTGGCTGAGCATTTCACTGAAGTTTAAAGCA...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR TCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAAAGGATTCAGCCGAGGTaGCGAGGCTTCTACTTGGGG +
Preference number: 2 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQRIQPR*RGFYLG
Trigger: CCCCAAGTAGAAGCCTCGTCACCTCGGCTGAATCCT...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR GCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAAATGTACAAGGAAAGTaGTTCAGAGCCTCTGCCTTG +
Preference number: 2 (lower is better)
Translates to: GFSPSISLYATSFGEMAKNVQGK*FRASAL
Trigger: CAAGGCAGAGGCTCTGAAGCACTTTCCTTGTACATT...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAAACTACTTCACCACTCTaGAGAGGACACTGGGCGGGC +
Preference number: 2 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQTTSPL*RGHWAG
Trigger: GCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGT...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGAACTCCCAGGGTTTGGTaGTGGCTTTGGGCCACTCAG +
Preference number: 2 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRTPRVW*WLWATQ
Trigger: CTGAGTGGCCCAAAGCCAGCACCAAACCCTGGGAGT...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR GCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAAACTCCCAGGGTTTGGTaGTGGCTTTGGGCCACTCAG +
Preference number: 2 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQTPRVW*WLWATQ
Trigger: CTGAGTGGCCCAAAGCCAGCACCAAACCCTGGGAGT...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp TACAGGAGTCTGTTCCCAGGAGGCACCAGGAATCTGAATCTAAGTCAGGCTTTGTGGCAAAATTTCCATTaGACAAGACCTCCCACAATG +
Preference number: 2 (lower is better)
Translates to: YRSLFPGGTRNLNLSQALWQNFH*TRPPTM
Trigger: CATTGTGGGAGGTCTTGTGCAATGGAAATTTTGCCA...CAAAGCCTGACTTAGATTCAGATTCCTGGTGCCTCCTGGGAACAGACTCCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR GCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAACCTTCTCAGCAACCTaGCCATGTCCATCAGCTCCA +
Preference number: 2 (lower is better)
Translates to: PALSLFLTEEISINPQRKTFSAT*PCPSAP
Trigger: TGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGGT...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTTGCTGTGAAGTTCTTTaGGTCCCAGTCTCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGCCEVL*VPVSWG
Trigger: CCCCCAGGAGACTGGGACCCAAAGAACTTCACAGCA...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAATCTCCTCTTCAAAGGTaGGATCAACAGATGAGGTAC +
Preference number: 2 (lower is better)
Translates to: GFSPSISLYATSFGEMAKSPLQR*DQQMRY
Trigger: GTACCTCATCTGTTGATCCCACCTTTGAAGAGGAGA...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGAGCCTGTCCCGAGCAATaGGGTTCTCCCCAAGCATCA +
Preference number: 2 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRACPEQ*GSPQAS
Trigger: TGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGC...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR TCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAATCGGTAAGTGTGCTGTaGAGTTCTTTGGGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: PALSLFLTEEISINPQRKSVSVL*SSLGPS
Trigger: ACTGGGACCCAAAGAACTTCACAGCACACTTACCGA...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTAAACAAGCCCTAGATTaGCTCCATCAGACATATTTT +
Preference number: 2 (lower is better)
Translates to: SSMAEAILMMNTQTDPASKQALD*LHQTYF
Trigger: AAAATATGTCTGATGGAGTCAATCTAGGGCTTGTTT...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCCAAAGAAGATCCCATTaGACAGAGTTGCCTGTCCCG +
Preference number: 2 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPQRRSH*TELPVP
Trigger: CGGGACAGGCAACTCTGTTCAATGGGATCTTCTTTG...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTCACTGTTACAGTTTATaGCAACCCCCGCAAGTCCCC +
Preference number: 2 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGHCYSL*QPPQVP
Trigger: GGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTG...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp GCCCCAAGAATAGACTTCCTTGTTTCGTGTCAGAACCACCACATGATTATCTCCTGGTCAAGGCACGAATaGACCATTTGGATCAATTCC +
Preference number: 2 (lower is better)
Translates to: APRIDFLVSCQNHHMIISWSRHE*TIWINS
Trigger: GGAATTGATCCAAATGGTTCATTCGTGCCTTGACCA...GGAGATAATCATGTGGTGGTTCTGACACGAAACAAGGAAGTCTATTCTTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR-3UTR GCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTCTATCTAAAAGGCAATaGCACTCTCCAAATGTACAA +
Preference number: 2 (lower is better)
Translates to: SSMAEAILMMNTQTDPASLSKRQ*HSPNVQ
Trigger: TTGTACATTTGGAGAGTGGCATTGCCTTTTAGATAG...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAACTACTTCACCACTCTaGAGAGGACACTGGGCGGGC +
Preference number: 2 (lower is better)
Translates to: FYKARWKYKAHILKETIKTTSPL*RGHWAG
Trigger: GCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGT...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCCAAGTCCCCAGAACTTaGAACTTTAATCAAAGTTTG +
Preference number: 2 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTQVPRT*NFNQSL
Trigger: CAAACTTTGATTAAAGTTGCAAGTTCTGGGGACTTG...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp GCCCCAAGAATAGACTTCCTTGTTTCGTGTCAGAACCACCACATGATTATCTCCAGTTTAGTGCCTCCTTaGATGTTCACCCAAGTGTAC +
Preference number: 2 (lower is better)
Translates to: APRIDFLVSCQNHHMIISSLVPP*MFTQVY
Trigger: GTACACTTGGGTGAACATGCAAGGAGGCACTAAACT...GGAGATAATCATGTGGTGGTTCTGACACGAAACAAGGAAGTCTATTCTTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR-3UTR GCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAACGGATAGCTTTGCCTTaGAACTTTTCCACATGCTTT +
Preference number: 2 (lower is better)
Translates to: GFSPSISLYATSFGEMAKRIALP*NFSTCF
Trigger: AAAGCATGTGGAAAAGTTGCAAGGCAAAGCTATCCG...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR GCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGCATGGGGATAAATTCTaGATTTTCCAGCTCCTTTCG +
Preference number: 2 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQHGDKF*IFQLLS
Trigger: CGAAAGGAGCTGGAAAATGCAGAATTTATCCCCATG...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR GCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTTTCTTGTTCAACTTCTaGAGTTGGGTAAAAATCTGG +
Preference number: 2 (lower is better)
Translates to: SSMAEAILMMNTQTDPASFLFNF*SWVKIW
Trigger: CCAGATTTTTACCCAACTGCAGAAGTTGAACAAGAA...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACACAAAGCCAGGGCCATaGGGGCCCTTCCATTCTCCA +
Preference number: 2 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHTKPGP*GPFHSP
Trigger: TGGAGAATGGAAGGGCCCCCATGGCCCTGGCTTTGT...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp TGCAGTTGGGTAAAAATCTGGAGGTTTTCTTGCTGTAGCTTCTGTTGTTCAGCCGAGCTGCTGTTGCTATaGCAGTCACTGATGACAAAG +
Preference number: 2 (lower is better)
Translates to: CSWVKIWRFSCCSFCCSAELLLL*QSLMTK
Trigger: CTTTGTCATCAGTGACTGCCATAGCAACAGCAGCTC...GGCTGAACAACAGAAGCTACAGCAAGAAAACCTCCAGATTTTTACCCAACTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCAATCCCACCCTGCATTaGTCACAGCCTGAAACACCA +
Preference number: 2 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPNPTLH*SQPETP
Trigger: TGGTGTTTCAGGCTGTGACCAATGCAGGGTGGGATT...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTACATTCAGAAAGAAAGTaGTTGGGGCTGCTGATATCA +
Preference number: 2 (lower is better)
Translates to: PTVTVYDNPRKSPELATLHSERK*LGLLIS
Trigger: TGATATCAGCAGCCCCAACCACTTTCTTTCTGAATG...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGGAAACACAGTTCCAATaGATAAGCCACTGCTATTGG +
Preference number: 2 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQETQFQ*ISHCYW
Trigger: CCAATAGCAGTGGCTTATCCATTGGAACTGTGTTTC...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR TCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTCAAAGAAGATCCCATTaGACAGAGTTGCCTGTCCCG +
Preference number: 2 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGQRRSH*TELPVP
Trigger: CGGGACAGGCAACTCTGTTCAATGGGATCTTCTTTG...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCCAAAGCCAGGAAAGCTaGTCTCTGCATTCGGTAAGT +
Preference number: 2 (lower is better)
Translates to: FPRQLPINGENDTWDISCQSQES*SLHSVS
Trigger: ACTTACCGAATGCAGAGAGCAGCTTTCCTGGCTTTG...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp TCGCTGGATGTTAGTAAGGTCATAGATCCGGGCCCTCCAGAGAGAACAAATTGTAAGCATCAGCCTTTATaGCACCAGTTTTGGAGAAAT +
Preference number: 2 (lower is better)
Translates to: SLDVSKVIDPGPPERTNCKHQPL*HQFWRN
Trigger: ATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTT...ACAATTTGTTCTCTCTGGAGGGCCCGGATCTATGACCTTACTAACATCCAGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR-3UTR GCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAAAGCATCAGCCTTTATaGCACCAGTTTTGGAGAAAT +
Preference number: 2 (lower is better)
Translates to: PTVTVYDNPRKSPELATLKHQPL*HQFWRN
Trigger: ATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTT...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp CGCATGGCACAAATTGGGTGGGGTTTAGAATCAGATGCTCCTCCAGATGGGAATCAAAGAATATTTCTGTaGAGATGTCCCTTGCATTGT +
Preference number: 2 (lower is better)
Translates to: RMAQIGWGLESDAPPDGNQRIFL*RCPLHC
Trigger: ACAATGCAAGGGACATCTGCACAGAAATATTCTTTG...ATTCCCATCTGGAGGAGCATCTGATTCTAAACCCCACCCAATTTGTGCCATGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR-3UTR GCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCGTTGTAACTTGGCTGTaGTATGCCAGGGAGACCAAA +
Preference number: 2 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPVVTWL*YARETK
Trigger: TTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAAC...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR GCA 90 bp GCATACAACTTTGAAGTCAGGTTGTATACCTGTGAAGAAGTGGACAGAGACAAGGTGCTTCAGTCACAGTaGTTGACCTTGGTCTCTTTG +
Preference number: 2 (lower is better)
Translates to: AYNFEVRLYTCEEVDRDKVLQSQ*LTLVSL
Trigger: CAAAGAGACCAAGGTCAAGCACTGTGACTGAAGCAC...CTTGTCTCTGTCCACTTCTTCACAGGTATACAACCTGACTTCAAAGTTGTATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR-3UTR CCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAATGCTGTGAAGTTCTTTaGGTCCCAGTCTCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: FYKARWKYKAHILKETIKCCEVL*VPVSWG
Trigger: CCCCCAGGAGACTGGGACCCAAAGAACTTCACAGCA...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCGAGCTGCTGTTGCTATaGCAGTCACTGATGACAAAG +
Preference number: 2 (lower is better)
Translates to: FPRQLPINGENDTWDISCELLLL*QSLMTK
Trigger: CTTTGTCATCAGTGACTGCCATAGCAACAGCAGCTC...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp CAGCAACTTTGTCCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGGTGAAAATGATACATaGGATATAAGCTGCTACCAG +
Preference number: 2 (lower is better)
Translates to: QQLCPPPCSHNNLIRRHRGENDT*DISCYQ
Trigger: CTGGTAGCAGCTTATATCCCATGTATCATTTTCACC...TCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAGTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CCA 90 bp TGGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTGAAGCACAGGGTGAAAATGATACATaGGATATAAGCTGCTACCAG +
Preference number: 2 (lower is better)
Translates to: WMFYPQRLRSMHRLTEAQGENDT*DISCYQ
Trigger: CTGGTAGCAGCTTATATCCCATGTATCATTTTCACC...CTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR CCA 90 bp AGAATTCAATACTTTCTCAACGATGAGAATGGTATGCCATCCACGGCAAGACAGTCAGACATATTTTCCTaGACTCAGGGCTCCCAAGAG +
Preference number: 2 (lower is better)
Translates to: RIQYFLNDENGMPSTARQSDIFS*TQGSQE
Trigger: CTCTTGGGAGCCCTGAGTCCAGGAAAATATGTCTGA...CTGTCTTGCCGTGGATGGCATACCATTCTCATCGTTGAGAAAGTATTGAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CCA 90 bp ATTCCTTTTGCAAGTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTCATTCAGAAAGAAAGTaGTTGGGGCTGCTGATATCA +
Preference number: 2 (lower is better)
Translates to: IPFASSTCSVRLQGLPGFHSERK*LGLLIS
Trigger: TGATATCAGCAGCCCCAACCACTTTCTTTCTGAATG...AAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp TACAGGAGTCTGTTCCCAGGAGGCACCAGGAATCTGAATCTAAGTCAGGCTTTGTTATGCCACCAGTTTTaGAGAAATGGCAAAATTTCC +
Preference number: 2 (lower is better)
Translates to: YRSLFPGGTRNLNLSQALLCHQF*RNGKIS
Trigger: GGAAATTTTGCCATTTCTCCAAAACTGGTGGCATAA...CAAAGCCTGACTTAGATTCAGATTCCTGGTGCCTCCTGGGAACAGACTCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CCA 90 bp CAGCTGACCATGGAGTTTAGTGCCTCCTTGCATGTTCACCCAAGTGTACAGTTCAAACATAGACTTCACTaGTTCGTGATGTTACTACAG +
Preference number: 2 (lower is better)
Translates to: QLTMEFSASLHVHPSVQFKHRLH*FVMLLQ
Trigger: CTGTAGTAACATCACGAACCAGTGAAGTCTATGTTT...GAACTGTACACTTGGGTGAACATGCAAGGAGGCACTAAACTCCATGGTCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR-3UTR TCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACGGTGGGATCAACAGATaGGGTACAGAGCTGCTGTTG +
Preference number: 2 (lower is better)
Translates to: NKITPRSYLKGNATLQMYGGINR*GTELLL
Trigger: CAACAGCAGCTCTGTACCTCATCTGTTGATCCCACC...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAACCAGCGCAATTAAGGTaGGCACTGTGTCTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: FYKARWKYKAHILKETIKPAQLR*ALCLLF
Trigger: GAAGAGGAGACACAGTGCTCACCTTAATTGCGCTGG...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACCCAGCGCAATTAAGGTaGGCACTGTGTCTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHPAQLR*ALCLLF
Trigger: GAAGAGGAGACACAGTGCTCACCTTAATTGCGCTGG...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAAAACAAGCCCTAGATTaGCTCCATCAGACATATTTT +
Preference number: 2 (lower is better)
Translates to: PTVTVYDNPRKSPELATLKQALD*LHQTYF
Trigger: AAAATATGTCTGATGGAGTCAATCTAGGGCTTGTTT...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTATGGACTCAATTCTCTaGGACACCTCATCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGMDSIL*DTSSLR
Trigger: TCTGAGGGATGAGGTGTCTCAGAGAATTGAGTCCAT...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGACCTCTTCTCCTTCATaGTTTTCTCTTAAGGCTATT +
Preference number: 2 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQTSSPS*FSLKAI
Trigger: AATAGCCTTAAGAGAAAATCATGAAGGAGAAGAGGT...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAACCTCTTCTCCTTCATaGTTTTCTCTTAAGGCTATT +
Preference number: 2 (lower is better)
Translates to: GFSPSISLYATSFGEMAKTSSPS*FSLKAI
Trigger: AATAGCCTTAAGAGAAAATCATGAAGGAGAAGAGGT...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAATACTCCATCCCCCTTTaGACTGGTTTCTGTTTGCAT +
Preference number: 2 (lower is better)
Translates to: PALSLFLTEEISINPQRKYSIPL*TGFCLH
Trigger: ATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTA...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp AGAATTCAATACTTTCTCAACGATGAGAATGGTATGCCATCCACGGCAAGACAGCAGTCACACAGACAGTaGAATCATCACCACATGACA +
Preference number: 2 (lower is better)
Translates to: RIQYFLNDENGMPSTARQQSHRQ*NHHHMT
Trigger: TGTCATGTGGTGATGATTTCACTGTCTGTGTGACTG...CTGTCTTGCCGTGGATGGCATACCATTCTCATCGTTGAGAAAGTATTGAATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR GCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCAATGTACAAGGAAAGTaGTTCAGAGCCTCTGCCTTG +
Preference number: 2 (lower is better)
Translates to: FPRQLPINGENDTWDISCNVQGK*FRASAL
Trigger: CAAGGCAGAGGCTCTGAAGCACTTTCCTTGTACATT...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTTGTAAGATTCTCTTTTaGCAGGTGCGGTGGCTCACA +
Preference number: 2 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGCKILF*QVRWLT
Trigger: TGTGAGCCACCGCACCTGGCAAAAGAGAATCTTACA...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGAAATCCCACCCTGCATTaGTCACAGCCTGAAACACCA +
Preference number: 2 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRNPTLH*SQPETP
Trigger: TGGTGTTTCAGGCTGTGACCAATGCAGGGTGGGATT...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR CCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAAAATCCCACCCTGCATTaGTCACAGCCTGAAACACCA +
Preference number: 2 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQNPTLH*SQPETP
Trigger: TGGTGTTTCAGGCTGTGACCAATGCAGGGTGGGATT...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAAGTTTGGTGCTGGCTTTaGGCCACTCAGGTAGGAAAA +
Preference number: 2 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQVWCWL*ATQVGK
Trigger: TTTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAAC...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAACGGAGGCTTAGAATCTaGATGTTTTATCCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: PALSLFLTEEISINPQRKRRLRI*MFYPQR
Trigger: TCTCTGGGGATAAAACATCCAGATTCTAAGCCTCCG...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR TCA 90 bp TGCAGTTGGGTAAAAATCTGGAGGTTTTCTTGCTGTAGCTTCTGTTGTTCAGCCAGATGCATACAACTTTaGAGTCAGGTTGTATACCTG +
Preference number: 2 (lower is better)
Translates to: CSWVKIWRFSCCSFCCSARCIQL*SQVVYL
Trigger: CAGGTATACAACCTGACTTCAAAGTTGTATGCATCT...GGCTGAACAACAGAAGCTACAGCAAGAAAACCTCCAGATTTTTACCCAACTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR GCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTAATGTACAAGGAAAGTaGTTCAGAGCCTCTGCCTTG +
Preference number: 2 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGNVQGK*FRASAL
Trigger: CAAGGCAGAGGCTCTGAAGCACTTTCCTTGTACATT...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGCAAAATTTCCATTaGACAAGACCTCCCACAATG +
Preference number: 2 (lower is better)
Translates to: ASSFTPSPFELVSVCILVWQNFH*TRPPTM
Trigger: CATTGTGGGAGGTCTTGTGCAATGGAAATTTTGCCA...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGTCATTCGTTACCACATaGCTTCATAAAACACCAAAA +
Preference number: 2 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQSFVTT*LHKTPK
Trigger: TTTTGGTGTTTTATGAAGCCATGTGGTAACGAATGA...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAAGCTGCACAGAGTAACTaGACTTTTTCGAAACAAGCC +
Preference number: 2 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQAAQSN*TFSKQA
Trigger: GGCTTGTTTCGAAAAAGTTCAGTTACTCTGTGCAGC...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGACATGCACAGGCTTACTaGAGCACAGTACTGATTAAG +
Preference number: 2 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRHAQAY*STVLIK
Trigger: CTTAATCAGTACTGTGCTTCAGTAAGCCTGTGCATG...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR GCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACCAAAGCCAGGAAAGCTaGTCTCTGCATTCGGTAAGT +
Preference number: 2 (lower is better)
Translates to: NKITPRSYLKGNATLQMYQSQES*SLHSVS
Trigger: ACTTACCGAATGCAGAGAGCAGCTTTCCTGGCTTTG...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCGAACTGGTTTCTGTTTaGATACTTGTTTGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPELVSV*ILVWWE
Trigger: TTCCCACCAAACAAGTATGCAAACAGAAACCAGTTC...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp AGAGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAATCTCCTCTTCAAAGGTaGGATCAACAGATGAGGTAC +
Preference number: 2 (lower is better)
Translates to: REAKNISVQMSLALFLFQSPLQR*DQQMRY
Trigger: GTACCTCATCTGTTGATCCCACCTTTGAAGAGGAGA...TTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR CCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACTCAGACATATTTTCCTaGACTCAGGGCTCCCAAGAG +
Preference number: 2 (lower is better)
Translates to: NKITPRSYLKGNATLQMYSDIFS*TQGSQE
Trigger: CTCTTGGGAGCCCTGAGTCCAGGAAAATATGTCTGA...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTAAGCATCAGCCTTTATaGCACCAGTTTTGGAGAAAT +
Preference number: 2 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGKHQPL*HQFWRN
Trigger: ATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTT...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTGGGAACTTCATGGTATaGTTCATGGTTGATAATTCC +
Preference number: 2 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGGNFMV*FMVDNS
Trigger: GGAATTATCAACCATGAAGCATACCATGAAGTTCCC...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACTCTCCTCTTCAAAGGTaGGATCAACAGATGAGGTAC +
Preference number: 2 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHSPLQR*DQQMRY
Trigger: GTACCTCATCTGTTGATCCCACCTTTGAAGAGGAGA...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAACATTCAGAAAGAAAGTaGTTGGGGCTGCTGATATCA +
Preference number: 2 (lower is better)
Translates to: FYKARWKYKAHILKETIKHSERK*LGLLIS
Trigger: TGATATCAGCAGCCCCAACCACTTTCTTTCTGAATG...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTTTATGCCACCAGTTTTaGAGAAATGGCAAAATTTCC +
Preference number: 2 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGLCHQF*RNGKIS
Trigger: GGAAATTTTGCCATTTCTCCAAAACTGGTGGCATAA...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CAA 90 bp CTGTTCTTAAATTTTACACAGATAGAGCTATATAGCATGTACTCTTaGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATA +
Preference number: 2 (lower is better)
Translates to: LFLNFTQIELYSMYS*WLASFSAHNAYETI
Trigger: TATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTATATAGCTCTATCTGTGTAAAATTTAAGAACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553823.6
3UTR-3UTR TCA 90 bp AGACTTGAAATTGTACTTTACTCCTTGACAGAGCTCTGGAGACATGTAATATGGGTCTTTATATCTCTATaGAGGATTCCAGCTTTATGG +
Preference number: 2 (lower is better)
Translates to: RLEIVLYSLTELWRHVIWVFISL*RIPALW
Trigger: CCATAAAGCTGGAATCCTTCATAGAGATATAAAGAC...CCATATTACATGTCTCCAGAGCTCTGTCAAGGAGTAAAGTACAATTTCAAGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554258.1
3UTR-3UTR GCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACGAACTGGTTTCTGTTTaGATACTTGTTTGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: NKITPRSYLKGNATLQMYELVSV*ILVWWE
Trigger: TTCCCACCAAACAAGTATGCAAACAGAAACCAGTTC...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACGGTGAAAATGATACATaGGATATAAGCTGCTACCAG +
Preference number: 2 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHGENDT*DISCYQ
Trigger: CTGGTAGCAGCTTATATCCCATGTATCATTTTCACC...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGACCAGTTTTGGAGAAATaGCAAAATTTCCATTGCACA +
Preference number: 2 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRPVLEK*QNFHCT
Trigger: TGTGCAATGGAAATTTTGCCATTTCTCCAAAACTGG...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR CAA 90 bp ATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAATTTCCATaGCACAAGACCTCCCACAATGTTGATAAGATTATCAAACATTTT +
Preference number: 2 (lower is better)
Translates to: ISLYATSFGEMAKFP*HKTSHNVDKIIKHF
Trigger: AAAATGTTTGATAATCTTATCAACATTGTGGGAGGTCTTGTGCAATGGAAATTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR TCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACACCTCTTCTCCTTCATaGTTTTCTCTTAAGGCTATT +
Preference number: 2 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHTSSPS*FSLKAI
Trigger: AATAGCCTTAAGAGAAAATCATGAAGGAGAAGAGGT...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR GCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACCAAGTCCCCAGAACTTaGAACTTTAATCAAAGTTTG +
Preference number: 2 (lower is better)
Translates to: NKITPRSYLKGNATLQMYQVPRT*NFNQSL
Trigger: CAAACTTTGATTAAAGTTGCAAGTTCTGGGGACTTG...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAATCATTCGTTACCACATaGCTTCATAAAACACCAAAA +
Preference number: 2 (lower is better)
Translates to: FYKARWKYKAHILKETIKSFVTT*LHKTPK
Trigger: TTTTGGTGTTTTATGAAGCCATGTGGTAACGAATGA...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCTCTCTGTGGGGGTCATaGCCAGGCGGCCATTACCAC +
Preference number: 3 (lower is better)
Translates to: GTHPPPALTFTPPSQQPASLWGS*PGGHYH
Trigger: GTGGTAATGGCCGCCTGGCAATGACCCCCACAGAGA...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR CCA 72 bp CCAGCTCCTTTCGAAGCCAGCCAGGACAGGAGCTGCTaGCCCCATTACTGTTCCCCATGGCCTCTGTGGGAC +
Preference number: 3 (lower is better)
Translates to: PAPFEASQDRSC*PHYCSPWPLWD
Trigger: GTCCCACAGAGGCCATGGGGAACAGTAATGGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR CCA 72 bp CTCCTGGGGGCTCTACAGGCTCAGGAGACTAGAGGCTaGGTCTACAGGAGTCTGTTCCCAGGAGGCACCAGG +
Preference number: 3 (lower is better)
Translates to: LLGALQAQETRG*VYRSLFPGGTR
Trigger: CCTGGTGCCTCCTGGGAACAGACTCCTGTAGACCCAGCCTCTAGTCTCCTGAGCCTGTAGAGCCCCCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CAA 90 bp TTCTGCATTTTCCAGCTCCTTTCGAAGCCAGCCAGGACAGGAGCTGCTGGCCCCAGGGACTCCCAGGGTTaGGTGCTGGCTTTGGGCCAC +
Preference number: 3 (lower is better)
Translates to: FCIFQLLSKPARTGAAGPRDSQG*VLALGH
Trigger: GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCT...GGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CAA 90 bp CTGGGGGCTCTACAGGCTCAGGAGACTAGAGGCTGGGTCTACAGGAGTCTGTTCTCAGGGCCAGCAACTTaGTCCACCCCCATGCAGCCA +
Preference number: 3 (lower is better)
Translates to: LGALQAQETRGWVYRSLFSGPAT*STPMQP
Trigger: TGGCTGCATGGGGGTGGACAAAGTTGCTGGCCCTGA...GAACAGACTCCTGTAGACCCAGCCTCTAGTCTCCTGAGCCTGTAGAGCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CAA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCACTCGGTCTGCTTCCATaGTTCCTCGGAAGCCTCCAC +
Preference number: 3 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPLGLLP*FLGSLH
Trigger: GTGGAGGCTTCCGAGGAACAATGGAAGCAGACCGAG...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR GCA 72 bp TTTCCAGCTCCTTTCGAAGCCAGCCAGGACAGGAGCTaGTGGCCCCATTACTGTTCCCCATGGCCTCTGTGG +
Preference number: 3 (lower is better)
Translates to: FPAPFEASQDRS*WPHYCSPWPLW
Trigger: CCACAGAGGCCATGGGGAACAGTAATGGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CAA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGGGTACAGAGCTGCTGTaGCTATGGCAGTCACTGATG +
Preference number: 3 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMGTELL*LWQSLM
Trigger: CATCAGTGACTGCCATAGCAACAGCAGCTCTGTACC...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCAGGTTTGGTGCTGGCTTaGGGCCACTCAGGTAGGAAA +
Preference number: 3 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPGLVLA*GHSGRK
Trigger: TTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAACC...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR GCA 72 bp TCTTGTAGTTCCCAACGCCCAGCTGCCCACACTTGTTaGAGCCAAAGGTCAGCAGCCGGCCTCGCTCATCAA +
Preference number: 3 (lower is better)
Translates to: SCSSQRPAAHTC*SQRSAAGLAHQ
Trigger: TTGATGAGCGAGGCCGGCTGCTGACCTTTGGCTGCAACAAGTGTGGGCAGCTGGGCGTTGGGAACTACAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR CCA 72 bp CTGCAGAGAGCTGCACGCACACGCAGGAGGAGTCAGTaGTGTTCCCTTCCCAGCACAGGTTACTGCAGGATT +
Preference number: 3 (lower is better)
Translates to: LQRAARTRRRSQ*CSLPSTGYCRI
Trigger: AATCCTGCAGTAACCTGTGCTGGGAAGGGAACACCACTGACTCCTCCTGCGTGTGCGTGCAGCTCTCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CAA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTTTCAGAGCCTCTGCCTaGCGCTCCTTTTCTGCAAGT +
Preference number: 3 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTFRASA*RSFSAS
Trigger: ACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGAA...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCTTCAGAGCCTCTGCCTaGCGCTCCTTTTCTGCAAGT +
Preference number: 3 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPFRASA*RSFSAS
Trigger: ACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGAA...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTGGTTTGGTGCTGGCTTaGGGCCACTCAGGTAGGAAA +
Preference number: 3 (lower is better)
Translates to: CLSRAMGFSPSISLYATSGLVLA*GHSGRK
Trigger: TTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAACC...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCAAACTGGCATTATCACTaGGAAAGGCCCCCACTGAGA +
Preference number: 3 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPNWHYH*ERPPLR
Trigger: TCTCAGTGGGGGCCTTTCCAAGTGATAATGCCAGTT...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR CAA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGGCTTCTACTTGGGGTTaGTGTTCCAAAGGAGCTTCA +
Preference number: 3 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMASTWG*CSKGAS
Trigger: TGAAGCTCCTTTGGAACACAAACCCCAAGTAGAAGC...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CAA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGGGTTTGGTGCTGGCTTaGGGCCACTCAGGTAGGAAA +
Preference number: 3 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGGLVLA*GHSGRK
Trigger: TTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAACC...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR GCA 72 bp CTTCTCCACTGTGACCACAGCAAAGTGGGTATTCCCTaGACAGACCTGCCGGGCACTACAGCCACTCTTGAT +
Preference number: 3 (lower is better)
Translates to: LLHCDHSKVGIP*TDLPGTTATLD
Trigger: ATCAAGAGTGGCTGTAGTGCCCGGCAGGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCACAGTGGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR-3UTR CAA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGGGTACAGAGCTGCTGTaGCTATGGCAGTCACTGATG +
Preference number: 3 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQGTELL*LWQSLM
Trigger: CATCAGTGACTGCCATAGCAACAGCAGCTCTGTACC...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCGAAACAAGCCCTAGATaGACTCCATCAGACATATTT +
Preference number: 3 (lower is better)
Translates to: GTHPPPALTFTPPSQQPAETSPR*TPSDIF
Trigger: AAATATGTCTGATGGAGTCAATCTAGGGCTTGTTTC...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp TACAGGAGTCTGTTCCCAGGAGGCACCAGGAATCTGAATCTAAGTCAGGCTTTGGGAGACCCTGATCACTaGCTTCCCACCAAGGGGTCC +
Preference number: 3 (lower is better)
Translates to: YRSLFPGGTRNLNLSQALGDPDH*LPTKGS
Trigger: GGACCCCTTGGTGGGAAGCAAGTGATCAGGGTCTCC...CAAAGCCTGACTTAGATTCAGATTCCTGGTGCCTCCTGGGAACAGACTCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR TCA 72 bp ATGGTATGCCATCCACGGCAAGACAGGTCCGGGACATaGTGCAGAGATCCAAAAATAGGCCGAGGCCATGAG +
Preference number: 3 (lower is better)
Translates to: MVCHPRQDRSGT*CRDPKIGRGHE
Trigger: CTCATGGCCTCGGCCTATTTTTGGATCTCTGCATCATGTCCCGGACCTGTCTTGCCGTGGATGGCATACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR GCA 72 bp GTGACCACAGCAAAGTGGGTATTCCCTGCACAGACCTaGCGGGCACTACAGCCACTCTTGATAACATCCAGT +
Preference number: 3 (lower is better)
Translates to: VTTAKWVFPAQT*RALQPLLITSS
Trigger: ACTGGATGTTATCAAGAGTGGCTGTAGTGCCCGGCAGGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR GCA 72 bp CTGTGGGGGTCATTGCCAGGCGGCCATTACCACCATTaGCCCAGGCAAAAATGTGATTATCATCAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: LWGSLPGGHYHH*PRQKCDYHQWQ
Trigger: CTGCCACTGATGATAATCACATTTTTGCCTGGGGCAATGGTGGTAATGGCCGCCTGGCAATGACCCCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR CCA 72 bp TGGAAACACTGGGCCAGCAACCCGCATGGCACAAATTaGGTGGGGTTTAGAATCAGATGCTCCTCCAGATGG +
Preference number: 3 (lower is better)
Translates to: WKHWASNPHGTN*VGFRIRCSSRW
Trigger: CCATCTGGAGGAGCATCTGATTCTAAACCCCACCCAATTTGTGCCATGCGGGTTGCTGGCCCAGTGTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR CCA 72 bp ATGAGGTACAGATATCAGAGCCATGTGGTCTCTCTGTaGGGGTCATTGCCAGGCGGCCATTACCACCATTGC +
Preference number: 3 (lower is better)
Translates to: MRYRYQSHVVSL*GSLPGGHYHHC
Trigger: GCAATGGTGGTAATGGCCGCCTGGCAATGACCCCCACAGAGAGACCACATGGCTCTGATATCTGTACCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CAA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGTACAGAGCTGCTGTaGCTATGGCAGTCACTGATG +
Preference number: 3 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALGTELL*LWQSLM
Trigger: CATCAGTGACTGCCATAGCAACAGCAGCTCTGTACC...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCAAAGAAGATCCCATaGAACAGAGTTGCCTGTCCC +
Preference number: 3 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGPKKIP*NRVACP
Trigger: GGGACAGGCAACTCTGTTCAATGGGATCTTCTTTGG...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp TACAGGAGTCTGTTCCCAGGAGGCACCAGGAATCTGAATCTAAGTCAGGCTTTGCCACAGGCCAGCACTTaGCCTGACTGGGTCAACAGA +
Preference number: 3 (lower is better)
Translates to: YRSLFPGGTRNLNLSQALPQAST*PDWVNR
Trigger: TCTGTTGACCCAGTCAGGCAAAGTGCTGGCCTGTGG...CAAAGCCTGACTTAGATTCAGATTCCTGGTGCCTCCTGGGAACAGACTCCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR TCA 72 bp TGGCCCCATTACTGTTCCCCATGGCCTCTGTGGGACTaGTTAAACCTTCCATTCCTCGGTCTGCTTCCATTG +
Preference number: 3 (lower is better)
Translates to: WPHYCSPWPLWD*LNLPFLGLLPL
Trigger: CAATGGAAGCAGACCGAGGAATGGAAGGTTTAATCAGTCCCACAGAGGCCATGGGGAACAGTAATGGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR GCA 72 bp GAGAGGAGATGGGCTGTCAGGCATGGGGATAAATTCTaGATTTTCCAGCTCCTTTCGAAGCCAGCCAGGACA +
Preference number: 3 (lower is better)
Translates to: ERRWAVRHGDKF*IFQLLSKPART
Trigger: TGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAATTTATCCCCATGCCTGACAGCCCATCTCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR CCA 72 bp AAGATCCCATTGAACAGAGTTGCCTGTCCCGAGCAATaGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCA +
Preference number: 3 (lower is better)
Translates to: KIPLNRVACPEQ*GSPQASAFMPP
Trigger: TGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CCA 72 bp AACACTGGGCCAGCAACCCGCATGGCACAAATTGGGTaGGGTTTAGAATCAGATGCTCCTCCAGATGGGAAT +
Preference number: 3 (lower is better)
Translates to: NTGPATRMAQIG*GLESDAPPDGN
Trigger: ATTCCCATCTGGAGGAGCATCTGATTCTAAACCCCACCCAATTTGTGCCATGCGGGTTGCTGGCCCAGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR-3UTR CAA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACATTCAGAGCCTCTGCCTaGCGCTCCTTTTCTGCAAGT +
Preference number: 3 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETFRASA*RSFSAS
Trigger: ACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGAA...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCACCTGCTCCACTGGATaGCTGAGGAAGAAGTTCAGC +
Preference number: 3 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTTCSTG*LRKKFS
Trigger: GCTGAACTTCTTCCTCAGCAATCCAGTGGAGCAGGT...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CAA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGTTACTCCATCCCCCTTaGAACTGGTTTCTGTTTGCA +
Preference number: 3 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGLLHPP*NWFLFA
Trigger: TGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAA...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCACAATAATCAAGGCCTaGGGAACATCCACCTTTTGT +
Preference number: 3 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISTIIKA*GTSTFC
Trigger: ACAAAAGGTGGATGTTCCCAAGGCCTTGATTATTGT...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR TCA 72 bp GCATGTTCACCCAAGTGTACAGTTCCTTCTCCACTGTaGCCACAGCAAAGTGGGTATTCCCTGCACAGACCT +
Preference number: 3 (lower is better)
Translates to: ACSPKCTVPSPL*PQQSGYSLHRP
Trigger: AGGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAACTGTACACTTGGGTGAACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR TCA 72 bp GGGGTTTGTGTTCCAAAGGAGCTTCAGAGGCCACTTTaGGTCCTTGCAGCTCTTCATAGGGCAGGGTATCTT +
Preference number: 3 (lower is better)
Translates to: GVCVPKELQRPL*VLAALHRAGYL
Trigger: AAGATACCCTGCCCTATGAAGAGCTGCAAGGACTCAAAGTGGCCTCTGAAGCTCCTTTGGAACACAAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR GCA 72 bp CTAGCACTTCAGGGCCAGCAACTTTGTCCACCCCCATaGAGCCATAATAATCTGATCCGAAGGCATAGAGCT +
Preference number: 3 (lower is better)
Translates to: LALQGQQLCPPP*SHNNLIRRHRA
Trigger: AGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAGTTGCTGGCCCTGAAGTGCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
3UTR CCA 72 bp ACGGATAGCTTTGCCTTGCAACTTTTCCACATGCTTTaGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAG +
Preference number: 3 (lower is better)
Translates to: TDSFALQLFHML*LSIGGFVSMAQ
Trigger: CTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCAAAGCATGTGGAAAAGTTGCAAGGCAAAGCTATCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
3UTR CCA 72 bp CACCACATGATTATCTCCACAGGAGACCTGCTCCACTaGATTGCTGAGGAAGAAGTTCAGCTGCATGGGTTC +
Preference number: 3 (lower is better)
Translates to: HHMIISTGDLLH*IAEEEVQLHGF
Trigger: GAACCCATGCAGCTGAACTTCTTCCTCAGCAATCCAGTGGAGCAGGTCTCCTGTGGAGATAATCATGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
3UTR-3UTR CAA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAGGTACAGAGCTGCTGTaGCTATGGCAGTCACTGATG +
Preference number: 3 (lower is better)
Translates to: PTVTVYDNPRKSPELATLGTELL*LWQSLM
Trigger: CATCAGTGACTGCCATAGCAACAGCAGCTCTGTACC...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp TTCTGCATTTTCCAGCTCCTTTCGAAGCCAGCCAGGACAGGAGCTGCTGGCCCCTTTATGCCACCAGTTTaGGAGAAATGGCAAAATTTC +
Preference number: 3 (lower is better)
Translates to: FCIFQLLSKPARTGAAGPFMPPV*EKWQNF
Trigger: GAAATTTTGCCATTTCTCCAAAACTGGTGGCATAAA...GGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CAA 90 bp TTCGTGATGTTACTACAGCAATGGGTGCTTCAGTCACAGTGCTTGACCTTGGTCCATGGCCCGAATTCCTaGCACGATCTTCACACACAG +
Preference number: 3 (lower is better)
Translates to: FVMLLQQWVLQSQCLTLVHGPNS*HDLHTQ
Trigger: CTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCATG...GACCAAGGTCAAGCACTGTGACTGAAGCACCCATTGCTGTAGTAACATCACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR-3UTR CAA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCACTTTTCCACATGCTTaGGCTGTCGATAGGAGGCTT +
Preference number: 3 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTTFPHA*AVDRRL
Trigger: AAGCCTCCTATCGACAGCCAAAGCATGTGGAAAAGT...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CAA 90 bp TGCAGTTGGGTAAAAATCTGGAGGTTTTCTTGCTGTAGCTTCTGTTGTTCAGCCAGCTGCCCACACTTGTaGCAGCCAAAGGTCAGCAGC +
Preference number: 3 (lower is better)
Translates to: CSWVKIWRFSCCSFCCSASCPHL*QPKVSS
Trigger: GCTGCTGACCTTTGGCTGCAACAAGTGTGGGCAGCT...GGCTGAACAACAGAAGCTACAGCAAGAAAACCTCCAGATTTTTACCCAACTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CAA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTCCCAGCTGCCCACACTaGTTGCAGCCAAAGGTCAGC +
Preference number: 3 (lower is better)
Translates to: ASSFTPSPFELVSVCILVPSCPH*LQPKVS
Trigger: GCTGACCTTTGGCTGCAACAAGTGTGGGCAGCTGGG...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR TCA 72 bp AGCAACTTTGTCCACCCCCATGCAGCCATAATAATCTaGTCCGAAGGCATAGAGCTGACCCTCATCAGTCAC +
Preference number: 3 (lower is better)
Translates to: SNFVHPHAAIII*SEGIELTLISH
Trigger: GTGACTGATGAGGGTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAGTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
3UTR CCA 72 bp ACAAGCCCTAGATTGACTCCATCAGACATATTTTCCTaGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCA +
Preference number: 3 (lower is better)
Translates to: TSPRLTPSDIFS*TQGSQEGQTTS
Trigger: TGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAATATGTCTGATGGAGTCAATCTAGGGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CCA 72 bp TCACTTGGCCTGCTTCACTTCTTTACCTTATCTGCCTaGTACCACAGGCACTTGGATTTGGGATCGCTGGAT +
Preference number: 3 (lower is better)
Translates to: SLGLLHFFTLSA*YHRHLDLGSLD
Trigger: ATCCAGCGATCCCAAATCCAAGTGCCTGTGGTACCAGGCAGATAAGGTAAAGAAGTGAAGCAGGCCAAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR CCA 72 bp ATGGGAATGGTAGCACCAGACCACTGCAGTCTCACTTaGCCTGCTTCACTTCTTTACCTTATCTGCCTGGTA +
Preference number: 3 (lower is better)
Translates to: MGMVAPDHCSLT*PASLLYLICLV
Trigger: TACCAGGCAGATAAGGTAAAGAAGTGAAGCAGGCCAAGTGAGACTGCAGTGGTCTGGTGCTACCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR CCA 72 bp GCCTCGCTCATCAATAGCAGCTGTGTGAGTCTTGCCTaGGGCAATGGTACGGATCTTATAAAAGGACAACTG +
Preference number: 3 (lower is better)
Translates to: ASLINSSCVSLA*GNGTDLIKGQL
Trigger: CAGTTGTCCTTTTATAAGATCCGTACCATTGCCCCAGGCAAGACTCACACAGCTGCTATTGATGAGCGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CAA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCTCAGAAAGAAAGTGGTaGGGGCTGCTGATATCAAGA +
Preference number: 3 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTSERKW*GLLISR
Trigger: TCTTGATATCAGCAGCCCCAACCACTTTCTTTCTGA...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTACCAAAGAAGATCCCATaGAACAGAGTTGCCTGTCCC +
Preference number: 3 (lower is better)
Translates to: PTVTVYDNPRKSPELATLPKKIP*NRVACP
Trigger: GGGACAGGCAACTCTGTTCAATGGGATCTTCTTTGG...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp TGCACAGACCTGCCGGGCACTACAGCCACTCTTGATAACATCCAGTTTCTGGGGGCACGAATGAACCATTaGGATCAATTCCAAAGAGTA +
Preference number: 3 (lower is better)
Translates to: CTDLPGTTATLDNIQFLGARMNH*DQFQRV
Trigger: TACTCTTTGGAATTGATCCAAATGGTTCATTCGTGC...CCCCAGAAACTGGATGTTATCAAGAGTGGCTGTAGTGCCCGGCAGGTCTGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR-3UTR CAA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTAGCTTATTGAATTCATaGAGTCCACAGGCCAGCACT +
Preference number: 3 (lower is better)
Translates to: SSMAEAILMMNTQTDPASSLLNS*SPQAST
Trigger: AGTGCTGGCCTGTGGACTCAATGAATTCAATAAGCT...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR TCA 72 bp GACATGATGCAGAGATCCAAAAATAGGCCGAGGCCATaGGGTACAGATATCAGAGCCATGTGGTCTCTCTGT +
Preference number: 3 (lower is better)
Translates to: DMMQRSKNRPRP*GTDIRAMWSLC
Trigger: ACAGAGAGACCACATGGCTCTGATATCTGTACCTCATGGCCTCGGCCTATTTTTGGATCTCTGCATCATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR CCA 72 bp GCAATTAAGGTGAGCACTGTGTCTCCTCTTCAAAGGTaGGATCAACAGATGAGGTACAGAGCTGCTGTTGCT +
Preference number: 3 (lower is better)
Translates to: AIKVSTVSPLQR*DQQMRYRAAVA
Trigger: AGCAACAGCAGCTCTGTACCTCATCTGTTGATCCCACCTTTGAAGAGGAGACACAGTGCTCACCTTAATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CCA 72 bp GGGTGGATTTTCCACCACCCCAAACATAGACTTCACTaGTTCGTGATGTTACTACAGCAATGGGTGCTTCAG +
Preference number: 3 (lower is better)
Translates to: GWIFHHPKHRLH*FVMLLQQWVLQ
Trigger: CTGAAGCACCCATTGCTGTAGTAACATCACGAACCAGTGAAGTCTATGTTTGGGGTGGTGGAAAATCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR CCA 72 bp CTTTACTCCTTGACAGAGCTCTGGAGACATGTAATATaGGGTTCCCACAAGCGTCTCAGCCATGGAATACTC +
Preference number: 3 (lower is better)
Translates to: LYSLTELWRHVI*GSHKRLSHGIL
Trigger: GAGTATTCCATGGCTGAGACGCTTGTGGGAACCCCATATTACATGTCTCCAGAGCTCTGTCAAGGAGTAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554258.1
3UTR CCA 72 bp CCATTTCCATCTCTTCCTTTGCTGTCTGAGTTCCTTTaGAATGCATCCCCACCTGTAATCCCAGCACTTTGG +
Preference number: 3 (lower is better)
Translates to: PFPSLPLLSEFL*NASPPVIPALW
Trigger: CCAAAGTGCTGGGATTACAGGTGGGGATGCATTCCAAAGGAACTCAGACAGCAAAGGAAGAGATGGAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CAA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACAATGGCAAAATTTCCATaGCACAAGACCTCCCACAAT +
Preference number: 3 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETMAKFP*HKTSHN
Trigger: ATTGTGGGAGGTCTTGTGCAATGGAAATTTTGCCAT...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCGAAACAAGCCCTAGATaGACTCCATCAGACATATTT +
Preference number: 3 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTETSPR*TPSDIF
Trigger: AAATATGTCTGATGGAGTCAATCTAGGGCTTGTTTC...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGTCAGAAAGAAAGTGGTaGGGGCTGCTGATATCAAGA +
Preference number: 3 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQSERKW*GLLISR
Trigger: TCTTGATATCAGCAGCCCCAACCACTTTCTTTCTGA...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp CCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACCCTCATGATTTTGAAACAAGCTaGGGTAACATAGTGAGAACC +
Preference number: 3 (lower is better)
Translates to: PPPCSHNNLIRRHRADPHDFETS*GNIVRT
Trigger: GGTTCTCACTATGTTACCCAAGCTTGTTTCAAAATC...ATGAGGGTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR-3UTR CAA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAGCCCAGATCATGCCATaGCACTCCAGCCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: FYKARWKYKAHILKETIKAQIMP*HSSLGD
Trigger: GTCACCCAGGCTGGAGTGCAATGGCATGATCTGGGC...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR TCA 72 bp TACATGGGATATAAGCTGCTACCAGCGCAATTAAGGTaGGCACTGTGTCTCCTCTTCAAAGGTGGGATCAAC +
Preference number: 3 (lower is better)
Translates to: YMGYKLLPAQLR*ALCLLFKGGIN
Trigger: GTTGATCCCACCTTTGAAGAGGAGACACAGTGCTCACCTTAATTGCGCTGGTAGCAGCTTATATCCCATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR TCA 72 bp CAGAGGCTCAAAGAAGTCTTTTCATGGGCAGAAGACTaGGAGCCCTCTAAGCCCTCTCTAAGATACCAAGTA +
Preference number: 3 (lower is better)
Translates to: QRLKEVFSWAED*EPSKPSLRYQV
Trigger: TACTTGGTATCTTAGAGAGGGCTTAGAGGGCTCTCAGTCTTCTGCCCATGAAAAGACTTCTTTGAGCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR TCA 72 bp GTAGGTCTCTGCTCAGGATCCTGGTCAAGGCACGAATaGACCATTTGGATCAATTCCAAAGAGTACTGGCTA +
Preference number: 3 (lower is better)
Translates to: VGLCSGSWSRHE*TIWINSKEYWL
Trigger: TAGCCAGTACTCTTTGGAATTGATCCAAATGGTTCATTCGTGCCTTGACCAGGATCCTGAGCAGAGACCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR TCA 72 bp GTCACACAGACAGTGAAATCATCACCACATGACACCTaGCGGATAGCTTTGCCTTGCAACTTTTCCACATGC +
Preference number: 3 (lower is better)
Translates to: VTQTVKSSPHDT*RIALPCNFSTC
Trigger: GCATGTGGAAAAGTTGCAAGGCAAAGCTATCCGTCAGGTGTCATGTGGTGATGATTTCACTGTCTGTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
3UTR GCA 72 bp CAAATGTACAAGGAAAGTGCTTCAGAGCCTCTGCCTTaGGCTCCTTTTCTGCAAGTGAACAAAGCCAGGAAA +
Preference number: 3 (lower is better)
Translates to: QMYKESASEPLP*APFLQVNKARK
Trigger: TTTCCTGGCTTTGTTCACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGAAGCACTTTCCTTGTACATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTTTTATGCCACCAGTTTaGGAGAAATGGCAAAATTTC +
Preference number: 3 (lower is better)
Translates to: SSMAEAILMMNTQTDPASFMPPV*EKWQNF
Trigger: GAAATTTTGCCATTTCTCCAAAACTGGTGGCATAAA...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTCCAAAGAAGATCCCATaGAACAGAGTTGCCTGTCCC +
Preference number: 3 (lower is better)
Translates to: ASSFTPSPFELVSVCILVPKKIP*NRVACP
Trigger: GGGACAGGCAACTCTGTTCAATGGGATCTTCTTTGG...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAAACTGGCATTATCACTaGGAAAGGCCCCCACTGAGA +
Preference number: 3 (lower is better)
Translates to: PALSLFLTEEISINPQRKNWHYH*ERPPLR
Trigger: TCTCAGTGGGGGCCTTTCCAAGTGATAATGCCAGTT...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR TCA 72 bp TTTTCCACCACCCCAAACATAGACTTCACTGGTTCGTaGTGTTACTACAGCAATGGGTGCTTCAGTCACAGT +
Preference number: 3 (lower is better)
Translates to: FSTTPNIDFTGS*CYYSNGCFSHS
Trigger: ACTGTGACTGAAGCACCCATTGCTGTAGTAACATCACGAACCAGTGAAGTCTATGTTTGGGGTGGTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR TCA 72 bp CTCATCAGTCACACAGACAGTGAAATCATCACCACATaGCACCTGACGGATAGCTTTGCCTTGCAACTTTTC +
Preference number: 3 (lower is better)
Translates to: LISHTDSEIITT*HLTDSFALQLF
Trigger: GAAAAGTTGCAAGGCAAAGCTATCCGTCAGGTGTCATGTGGTGATGATTTCACTGTCTGTGTGACTGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
3UTR GCA 72 bp GGCCAAGGTCACAAAATGGCAACATGTGGATTGCTTTaGTCCACAGATGTTTTATTTCGCTGGCCTAGCATT +
Preference number: 3 (lower is better)
Translates to: GQGHKMATCGLL*STDVLFRWPSI
Trigger: AATGCTAGGCCAGCGAAATAAAACATCTGTGGAGCAAAGCAATCCACATGTTGCCATTTTGTGACCTTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR-3UTR CAA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGAGGTACAGAGCTGCTGTaGCTATGGCAGTCACTGATG +
Preference number: 3 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRGTELL*LWQSLM
Trigger: CATCAGTGACTGCCATAGCAACAGCAGCTCTGTACC...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR CAA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGGAAACAAGCCCTAGATaGACTCCATCAGACATATTT +
Preference number: 3 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQETSPR*TPSDIF
Trigger: AAATATGTCTGATGGAGTCAATCTAGGGCTTGTTTC...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAGAAACAAGCCCTAGATaGACTCCATCAGACATATTT +
Preference number: 3 (lower is better)
Translates to: GFSPSISLYATSFGEMAKETSPR*TPSDIF
Trigger: AAATATGTCTGATGGAGTCAATCTAGGGCTTGTTTC...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CCA 72 bp AGACTTGAAATTGTACTTTACTCCTTGACAGAGCTCTaGAGACATGTAATATGGGGTTCCCACAAGCGTCTC +
Preference number: 3 (lower is better)
Translates to: RLEIVLYSLTEL*RHVIWGSHKRL
Trigger: GAGACGCTTGTGGGAACCCCATATTACATGTCTCCAGAGCTCTGTCAAGGAGTAAAGTACAATTTCAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554258.1
3UTR-3UTR CAA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACTTCAGAGCCTCTGCCTaGCGCTCCTTTTCTGCAAGT +
Preference number: 3 (lower is better)
Translates to: NKITPRSYLKGNATLQMYFRASA*RSFSAS
Trigger: ACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGAA...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACTTCAGAGCCTCTGCCTaGCGCTCCTTTTCTGCAAGT +
Preference number: 3 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHFRASA*RSFSAS
Trigger: ACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGAA...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTATTTATGCCACCAGTTTaGGAGAAATGGCAAAATTTC +
Preference number: 3 (lower is better)
Translates to: PTVTVYDNPRKSPELATLFMPPV*EKWQNF
Trigger: GAAATTTTGCCATTTCTCCAAAACTGGTGGCATAAA...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR TCA 72 bp TCACTCTCCACAGCTACACAGGTGGTAACAGAGATGTaGCATAGTGGAGTTTTTCTCCCTAATGTTCATCAT +
Preference number: 3 (lower is better)
Translates to: SLSTATQVVTEM*HSGVFLPNVHH
Trigger: ATGATGAACATTAGGGAGAAAAACTCCACTATGTCACATCTCTGTTACCACCTGTGTAGCTGTGGAGAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR-3UTR CAA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCCAGATGTCCCTTGCATaGTTTCTGTTCCAAGAACAT +
Preference number: 3 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPQMSLA*FLFQEH
Trigger: ATGTTCTTGGAACAGAAACAATGCAAGGGACATCTG...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR TCA 72 bp TGGTATGCTTCATGGTTGATAATTCCCGACATGCACTaGTTCAGACCCAGCTTATTGAATTCATTGAGTCCA +
Preference number: 3 (lower is better)
Translates to: WYASWLIIPDMH*FRPSLLNSLSP
Trigger: TGGACTCAATGAATTCAATAAGCTGGGTCTGAATCAGTGCATGTCGGGAATTATCAACCATGAAGCATACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR GCA 72 bp CATGACAGGTCAATCGGTCCTCAAGAAAATCAAAGTTaGATTTACATGCTGAACCAAAACCCACTGTTACAG +
Preference number: 3 (lower is better)
Translates to: HDRSIGPQENQS*IYMLNQNPLLQ
Trigger: CTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACTTTGATTTTCTTGAGGACCGATTGACCTGTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR GCA 72 bp GTATGTAATGCAGCACAGCACCTTCTGGCCAATGTTTaGTTTCATTATCAATTTATCACTCTCCACAGCTAC +
Preference number: 3 (lower is better)
Translates to: VCNAAQHLLANV*FHYQFITLHSY
Trigger: GTAGCTGTGGAGAGTGATAAATTGATAATGAAAGCAAACATTGGCCAGAAGGTGCTGTGCTGCATTACATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR GCA 72 bp AACTTCTGCAGTTGGGTAAAAATCTGGAGGTTTTCTTaGTGTAGCTTCTGTTGTTCAGCCAGACACTTTAAC +
Preference number: 3 (lower is better)
Translates to: NFCSWVKIWRFS*CSFCCSARHFN
Trigger: GTTAAAGTGTCTGGCTGAACAACAGAAGCTACAGCAAGAAAACCTCCAGATTTTTACCCAACTGCAGAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CAA 90 bp AGAATTCAATACTTTCTCAACGATGAGAATGGTATGCCATCCACGGCAAGACAGGAAACAAGCCCTAGATaGACTCCATCAGACATATTT +
Preference number: 3 (lower is better)
Translates to: RIQYFLNDENGMPSTARQETSPR*TPSDIF
Trigger: AAATATGTCTGATGGAGTCAATCTAGGGCTTGTTTC...CTGTCTTGCCGTGGATGGCATACCATTCTCATCGTTGAGAAAGTATTGAATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
3UTR-3UTR CAA 90 bp AGAGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAATCAGAAAGAAAGTGGTaGGGGCTGCTGATATCAAGA +
Preference number: 3 (lower is better)
Translates to: REAKNISVQMSLALFLFQSERKW*GLLISR
Trigger: TCTTGATATCAGCAGCCCCAACCACTTTCTTTCTGA...TTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR CAA 90 bp AGAGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAATTACTCCATCCCCCTTaGAACTGGTTTCTGTTTGCA +
Preference number: 3 (lower is better)
Translates to: REAKNISVQMSLALFLFQLLHPP*NWFLFA
Trigger: TGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAA...TTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR-3UTR CAA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACTCAGAAAGAAAGTGGTaGGGGCTGCTGATATCAAGA +
Preference number: 3 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHSERKW*GLLISR
Trigger: TCTTGATATCAGCAGCCCCAACCACTTTCTTTCTGA...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACTCAGAAAGAAAGTGGTaGGGGCTGCTGATATCAAGA +
Preference number: 3 (lower is better)
Translates to: NKITPRSYLKGNATLQMYSERKW*GLLISR
Trigger: TCTTGATATCAGCAGCCCCAACCACTTTCTTTCTGA...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR TCA 72 bp TTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTaGAGCACAGTACTGATTAAGAGCTTAAATGTTTAT +
Preference number: 3 (lower is better)
Translates to: LSPETKVHAQAY*STVLIKSLNVY
Trigger: ATAAACATTTAAGCTCTTAATCAGTACTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR CCA 72 bp TTTACACAGATAGAGCTATATAGCATGTACTCTTTGTaGCTGGCTTCTTTTTCTGCACACAATGCCTATGAG +
Preference number: 3 (lower is better)
Translates to: FTQIELYSMYSL*LASFSAHNAYE
Trigger: CTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTATATAGCTCTATCTGTGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
3UTR-3UTR CAA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACCAGATGTCCCTTGCATaGTTTCTGTTCCAAGAACAT +
Preference number: 3 (lower is better)
Translates to: NKITPRSYLKGNATLQMYQMSLA*FLFQEH
Trigger: ATGTTCTTGGAACAGAAACAATGCAAGGGACATCTG...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR GCA 72 bp ATGCCACCAGTTTTGGAGAAATGGCAAAATTTCCATTaGACAAGACCTCCCACAATGTTGATAAGATTATCA +
Preference number: 3 (lower is better)
Translates to: MPPVLEKWQNFH*TRPPTMLIRLS
Trigger: TGATAATCTTATCAACATTGTGGGAGGTCTTGTGCAATGGAAATTTTGCCATTTCTCCAAAACTGGTGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CCA 72 bp ACACAAAATACCACAGGAACATTTTACAAGGCTAGGTaGAAATACAAAGCTCACATCCTTAAGGAAACCATC +
Preference number: 3 (lower is better)
Translates to: TQNTTGTFYKAR*KYKAHILKETI
Trigger: GATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAATGTTCCTGTGGTATTTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR-3UTR CAA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAATTTATGCCACCAGTTTaGGAGAAATGGCAAAATTTC +
Preference number: 3 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQFMPPV*EKWQNF
Trigger: GAAATTTTGCCATTTCTCCAAAACTGGTGGCATAAA...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCAGGCCCTGGCCGCGCTaGGTCCCGCTCGCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPARPWPR*VPLASD
Trigger: ATCTGAAGCGAGCGGGACGCAGCGCGGCCAGGGCCT...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678531.1
CDS-3UTR CCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGGGGTTGGCGGGCGCGTaGTGGGAACCGCGTGGAACC +
Preference number: 4 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMGLAGA*WEPRGT
Trigger: GGTTCCACGCGGTTCCCACCACGCGCCCGCCAACCC...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS-3UTR GCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGACCAGCCTGCGTATaGCCGGAGGCCCTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTGPACV*PEALAA
Trigger: CGCGGCCAGGGCCTCCGGGCATACGCAGGCTGGTCC...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678531.1
CDS-3UTR GCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACCCTTGGGGACCAGCCTaGGTATGCCCGGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHPWGPA*VCPEAL
Trigger: CAGGGCCTCCGGGCATACGCAGGCTGGTCCCCAAGG...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678531.1
CDS-3UTR CCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCTATGCCCGGAGGCCCTaGCCGCGCTGCGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPYARRP*PRCVPL
Trigger: GAGCGGGACGCAGCGCGGCCAGGGCCTCCGGGCATA...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678531.1
CDS-3UTR TCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGTGGGCGGGCCACACCTaGTTCCAGCCCACTCCAACT +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGWAGHT*FQPTPT
Trigger: AGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCA...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTTGCGGCGGTACAGCGTaGCTTCCCCGAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTCGGTA*LPRRRR
Trigger: GCGGCGCCTTCGGGGAAGCCACGCTGTACCGCCGCA...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678037.1
CDS-3UTR TCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCTTCCACACAACCAGTaGGTCATCCTCGGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGLPHNQ*VILGAA
Trigger: CGCCGCACCGAGGATGACTCACTGGTTGTGTGGAAG...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678037.1
CDS-3UTR GCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACCCCGCTCGCTTCAGATaGCGGCCCGCGGATCCGTCA +
Preference number: 4 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHPARFR*RPADPS
Trigger: TGACGGATCCGCGGGCCGGCATCTGAAGCGAGCGGG...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678531.1
CDS-3UTR CCA 90 bp CACATGCTTTGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACCATGTATGCCCGGAGGCCCTaGCCGCGCTGCGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: HMLWLSIGGFVSMAQLTMYARRP*PRCVPL
Trigger: GAGCGGGACGCAGCGCGGCCAGGGCCTCCGGGCATA...CATGGTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCAAAGCATGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR TCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCACCGCAGGAGACCCTaGTCACTTGCTTCCCACCAA +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGHRRRP*SLASHQ
Trigger: TTGGTGGGAAGCAAGTGATCAGGGTCTCCTGCGGTG...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCTTCCACACAACCAGTaGGTCATCTCGCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPALPHNQ*VISPST
Trigger: GGTGCTGGGCGAGATGACTCACTGGTTGTGTGGAAG...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678531.1
CDS-3UTR GCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGACTACTTCACCACTCTaGAGAGGACACTGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGTTSPL*RGHWAG
Trigger: GCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGT...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCACTCCCAGGGTTTGGTaGTGGCTTTGGGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPATPRVW*WLWATQ
Trigger: CTGAGTGGCCCAAAGCCAGCACCAAACCCTGGGAGT...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCGCAGGAGGAGTCAGTaGTGTTCCCTTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPARRRSQ*CSLPST
Trigger: TGTGCTGGGAAGGGAACACCACTGACTCCTCCTGCG...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGTCTCCATGGCCCAGCTaGCCATGGAGTTTAGTGCCT +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGSPWPS*PWSLVP
Trigger: AGGCACTAAACTCCATGGTCAGCTGGGCCATGGAGA...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCGGAAAGGCTCCCCTATaGACAAGACCAGGGCACTCA +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPAGKAPL*TRPGHS
Trigger: TGAGTGCCCTGGTCTTGTTCATAGGGGAGCCTTTCC...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCGGACCAGCCTGCGTATaGCCGGAGGCCCTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTGPACV*PEALAA
Trigger: CGCGGCCAGGGCCTCCGGGCATACGCAGGCTGGTCC...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678531.1
CDS-3UTR GCA 90 bp CCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACCCTCATGGACCAGCCTGCGTATaGCCGGAGGCCCTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: PPPCSHNNLIRRHRADPHGPACV*PEALAA
Trigger: CGCGGCCAGGGCCTCCGGGCATACGCAGGCTGGTCC...ATGAGGGTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR GCA 90 bp GTCTCCATGGCCCAGCTGACCATGGAGTTTAGTGCCTCCTTGCATGTTCACCCACCTTGGGGACCAGCCTaGGTATGCCCGGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: VSMAQLTMEFSASLHVHPPWGPA*VCPEAL
Trigger: CAGGGCCTCCGGGCATACGCAGGCTGGTCCCCAAGG...TGGGTGAACATGCAAGGAGGCACTAAACTCCATGGTCAGCTGGGCCATGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR GCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCTCTCCACAGGAGACCTaGTCCACTGGATTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPASPQET*STGLLR
Trigger: CCTCAGCAATCCAGTGGAGCAGGTCTCCTGTGGAGA...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCACTTTCGGGGAAGGCCTaGAAAGTGAGGCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPLSGKA*KVRPRA
Trigger: AGCCCGAGGCCTCACTTTGCAGGCCTTCCCCGAAAG...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS-3UTR CCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTTATGCCCGGAGGCCCTaGCCGCGCTGCGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASYARRP*PRCVPL
Trigger: GAGCGGGACGCAGCGCGGCCAGGGCCTCCGGGCATA...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678531.1
CDS-3UTR CCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGCAGGACAGGAGCTGCTaGCCCCATTACTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMQDRSC*PHYCSP
Trigger: TGGGGAACAGTAATGGGGCCAGCAGCTCCTGTCCTG...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTCTTCCACACAACCAGTaGGTCATCCTCGGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTLPHNQ*VILGAA
Trigger: CGCCGCACCGAGGATGACTCACTGGTTGTGTGGAAG...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678037.1
CDS-3UTR TCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCTCACCACATGACACCTaGCGGATAGCTTTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPASPHDT*RIALPC
Trigger: GCAAGGCAAAGCTATCCGTCAGGTGTCATGTGGTGA...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGTCAATAGCAGCTGTGTaGGTCTTGCCTGGGGCAATG +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGSIAAV*VLPGAM
Trigger: CATTGCCCCAGGCAAGACTCACACAGCTGCTATTGA...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACTCATGGGCAGAAGACTaGGAGCCCTCTAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHSWAED*EPSKPS
Trigger: AGAGGGCTTAGAGGGCTCTCAGTCTTCTGCCCATGA...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCACTGTTACAGTTTATaGCAACCCCCGCAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGHCYSL*QPPQVP
Trigger: GGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTG...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCACTGTTACAGTTTATaGCAACCCCCGCAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPAHCYSL*QPPQVP
Trigger: GGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTG...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACATGGTCTTGAACTCCTaGCCTGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHMVLNS*PAHLGL
Trigger: GAGGCCGAGGTGGGCAGGTCAGGAGTTCAAGACCAT...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR TCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACGAACAAGGGCATCACTaGCGGTACGGCCTCTCGGGT +
Preference number: 4 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHEQGHH*RYGLSG
Trigger: ACCCGAGAGGCCGTACCGTCAGTGATGCCCTTGTTC...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS-3UTR GCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATCCTTGGGGACCAGCCTaGGTATGCCCGGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHPWGPA*VCPEAL
Trigger: CAGGGCCTCCGGGCATACGCAGGCTGGTCCCCAAGG...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678531.1
CDS-3UTR GCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACTCTCCACAGGAGACCTaGTCCACTGGATTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHSPQET*STGLLR
Trigger: CCTCAGCAATCCAGTGGAGCAGGTCTCCTGTGGAGA...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCATTCCCAACGCCCAGCTaGCCACACTTGTTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPFPTPS*PHLLQP
Trigger: TGGCTGCAACAAGTGTGGGCAGCTGGGCGTTGGGAA...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCAGAGACCCTGATCACTTaGTTCCCACCAAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPETLIT*FPPRGP
Trigger: GGGACCCCTTGGTGGGAAGCAAGTGATCAGGGTCTC...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCAAGCCAGGACAGGAGCTaGTGGCCCCATTACTGTTCC +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPSQDRS*WPHYCS
Trigger: GGAACAGTAATGGGGCCAGCAGCTCCTGTCCTGGCT...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCACCTTCTCAGCAACCTaGCCATGTCCATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPATFSAT*PCPSAP
Trigger: TGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGGT...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCGGCCCAGGACGCGGATaGGGATGTAGTGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPGPGRG*GCSAVP
Trigger: AGGAACTGCACTACATCCCCATCCGCGTCCTGGGCC...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678037.1
CDS-3UTR CCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGGTGACCACAGCAAAGTaGGTATTCCCTGCACAGACC +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGVTTAK*VFPAQT
Trigger: GGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCAC...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGGTGGTGGGAACCGCGTaGAACCGAAGGGCTCCCACG +
Preference number: 4 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQVVGTA*NRRAPT
Trigger: CGTGGGAGCCCTTCGGTTCCACGCGGTTCCCACCAC...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS-3UTR TCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCATCTCCATGGCCCAGCTaGCCATGGAGTTTAGTGCCT +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPSPWPS*PWSLVP
Trigger: AGGCACTAAACTCCATGGTCAGCTGGGCCATGGAGA...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTCTGCATTTTCCAGCTCCTTTCGAAGCCAGCCAGGACAGGAGCTGCTGGCCCCCACCGCAGGAGACCCTaGTCACTTGCTTCCCACCAA +
Preference number: 4 (lower is better)
Translates to: FCIFQLLSKPARTGAAGPHRRRP*SLASHQ
Trigger: TTGGTGGGAAGCAAGTGATCAGGGTCTCCTGCGGTG...GGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCTTCAGAGGCCACTTTaGGTCCTTGCAGCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPALQRPL*VLAALH
Trigger: ATGAAGAGCTGCAAGGACTCAAAGTGGCCTCTGAAG...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCAGGATTCAGCCGAGGTaGCGAGGCTTCTACTTGGGG +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPRIQPR*RGFYLG
Trigger: CCCCAAGTAGAAGCCTCGTCACCTCGGCTGAATCCT...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTAGGATTCAGCCGAGGTaGCGAGGCTTCTACTTGGGG +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTRIQPR*RGFYLG
Trigger: CCCCAAGTAGAAGCCTCGTCACCTCGGCTGAATCCT...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACCCAGCGCAATTAAGGTaGGCACTGTGTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHPAQLR*ALCLLF
Trigger: GAAGAGGAGACACAGTGCTCACCTTAATTGCGCTGG...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACGCATTGGTCACAGCCTaGAACACCAGCTGTGTGATG +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHALVTA*NTSCVM
Trigger: CATCACACAGCTGGTGTTTCAGGCTGTGACCAATGC...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGGAGGATACAGGGACATaGCAGGTCAATCGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMEDTGT*QVNRSS
Trigger: TGAGGACCGATTGACCTGTCATGTCCCTGTATCCTC...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCGATGAACACCCAAACTaGCCCAGCCTCTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPDEHPN*PSLSGL
Trigger: CAGGCCTGAGAGGCTGGGTCAGTTTGGGTGTTCATC...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACGATGAACACCCAAACTaGCCCAGCCTCTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHDEHPN*PSLSGL
Trigger: CAGGCCTGAGAGGCTGGGTCAGTTTGGGTGTTCATC...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CACCCAAGTGTACAGTTCCTTCTCCACTGTGACCACAGCAAAGTGGGTATTCCCCCCGCTCGCTTCAGATaGCGGCCCGCGGATCCGTCA +
Preference number: 4 (lower is better)
Translates to: HPSVQFLLHCDHSKVGIPPARFR*RPADPS
Trigger: TGACGGATCCGCGGGCCGGCATCTGAAGCGAGCGGG...GGGAATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAACTGTACACTTGGGTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR GCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACCACAGGCCAGCACTTTaGCTGACTGGGTCAACAGAA +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHHRPAL*LTGSTE
Trigger: TTCTGTTGACCCAGTCAGGCAAAGTGCTGGCCTGTG...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCAGCCAGGACAGGAGCTaGTGGCCCCATTACTGTTCC +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPSQDRS*WPHYCS
Trigger: GGAACAGTAATGGGGCCAGCAGCTCCTGTCCTGGCT...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCGAATGCATCCCCACCTaGTGCCCTCCTTCTAATTTC +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPAECIPT*CPPSNF
Trigger: GAAATTAGAAGGAGGGCAGCAGGTGGGGATGCATTC...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TTCTGCATTTTCCAGCTCCTTTCGAAGCCAGCCAGGACAGGAGCTGCTGGCCCCACTACTTCACCACTCTaGAGAGGACACTGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: FCIFQLLSKPARTGAAGPTTSPL*RGHWAG
Trigger: GCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGT...GGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR GCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTTCTCAGCAACCTaGCCATGTCCATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHTFSAT*PCPSAP
Trigger: TGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGGT...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCGCTGGATGTTAGTAAGGTCATAGATCCGGGCCCTCCAGAGAGAACAAATTGTGGCGGCCGCGGGCCTTaGGGACCAGCCTGCGTATGC +
Preference number: 4 (lower is better)
Translates to: SLDVSKVIDPGPPERTNCGGRGP*GPACVC
Trigger: GCATACGCAGGCTGGTCCCCAAGGCCCGCGGCCGCC...ACAATTTGTTCTCTCTGGAGGGCCCGGATCTATGACCTTACTAACATCCAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR CCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCGGCCCAGGACGCGGATaGGGATGTAGTGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISGPGRG*GCSAVP
Trigger: AGGAACTGCACTACATCCCCATCCGCGTCCTGGGCC...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678037.1
CDS-3UTR CCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACCAGGACAGGAGCTGCTaGCCCCATTACTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHQDRSC*PHYCSP
Trigger: TGGGGAACAGTAATGGGGCCAGCAGCTCCTGTCCTG...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTCGCAGGAGGAGTCAGTaGTGTTCCCTTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTRRRSQ*CSLPST
Trigger: TGTGCTGGGAAGGGAACACCACTGACTCCTCCTGCG...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACGCCTGTCCCGAGCAATaGGGTTCTCCCCAAGCATCA +
Preference number: 4 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHACPEQ*GSPQAS
Trigger: TGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGC...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTTCTCCATGGCCCAGCTaGCCATGGAGTTTAGTGCCT +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTSPWPS*PWSLVP
Trigger: AGGCACTAAACTCCATGGTCAGCTGGGCCATGGAGA...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCATCACCACATGACACCTaGCGGATAGCTTTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPSPHDT*RIALPC
Trigger: GCAAGGCAAAGCTATCCGTCAGGTGTCATGTGGTGA...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACGTCAGAACCACCACATaGTTATCTCCACAGGAGACC +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHVRTTT*LSPQET
Trigger: GGTCTCCTGTGGAGATAATCATGTGGTGGTTCTGAC...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCGACAGGTCCGGGACATaGTGCAGAGATCCAAAAATA +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPADRSGT*CRDPKI
Trigger: TATTTTTGGATCTCTGCATCATGTCCCGGACCTGTC...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCAGCTGCATGGGTTCTAGCACTTCAGGGCCAGCAACTTTGTCCACCCCCATGCAGGATTCAGCCGAGGTaGCGAGGCTTCTACTTGGGG +
Preference number: 4 (lower is better)
Translates to: SAAWVLALQGQQLCPPPCRIQPR*RGFYLG
Trigger: CCCCAAGTAGAAGCCTCGTCACCTCGGCTGAATCCT...GCATGGGGGTGGACAAAGTTGCTGGCCCTGAAGTGCTAGAACCCATGCAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACTCGGTAAGTGTGCTGTaGAGTTCTTTGGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHSVSVL*SSLGPS
Trigger: ACTGGGACCCAAAGAACTTCACAGCACACTTACCGA...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCATGGACTCAATTCTCTaGGACACCTCATCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPAMDSIL*DTSSLR
Trigger: TCTGAGGGATGAGGTGTCTCAGAGAATTGAGTCCAT...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCGATGAACACCCAAACTaGCCCAGCCTCTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISDEHPN*PSLSGL
Trigger: CAGGCCTGAGAGGCTGGGTCAGTTTGGGTGTTCATC...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTCTGCATTTTCCAGCTCCTTTCGAAGCCAGCCAGGACAGGAGCTGCTGGCCCCGGAAAGGCTCCCCTATaGACAAGACCAGGGCACTCA +
Preference number: 4 (lower is better)
Translates to: FCIFQLLSKPARTGAAGPGKAPL*TRPGHS
Trigger: TGAGTGCCCTGGTCTTGTTCATAGGGGAGCCTTTCC...GGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR GCA 90 bp ATAGGTACCACACCACCATCAGTACGCAGTAATAGAACCAGGAAAGAAAGCCCAGGACCAGCCTGCGTATaGCCGGAGGCCCTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: IGTTPPSVRSNRTRKESPGPACV*PEALAA
Trigger: CGCGGCCAGGGCCTCCGGGCATACGCAGGCTGGTCC...TGGGCTTTCTTTCCTGGTTCTATTACTGCGTACTGATGGTGGTGTGGTACCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS-3UTR GCA 90 bp GGTACCACACCACCATCAGTACGCAGTAATAGAACCAGGAAAGAAAGCCCACAGCCTTGGGGACCAGCCTaGGTATGCCCGGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GTTPPSVRSNRTRKESPQPWGPA*VCPEAL
Trigger: CAGGGCCTCCGGGCATACGCAGGCTGGTCCCCAAGG...CTGTGGGCTTTCTTTCCTGGTTCTATTACTGCGTACTGATGGTGGTGTGGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS-3UTR GCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTAAAGTGGGTATTCCCTaGACAGACCTGCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTKVGIP*TDLPGT
Trigger: AGTGCCCGGCAGGTCTGTGCAGGGAATACCCACTTT...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TTCTGCATTTTCCAGCTCCTTTCGAAGCCAGCCAGGACAGGAGCTGCTGGCCCCTCTCCACAGGAGACCTaGTCCACTGGATTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: FCIFQLLSKPARTGAAGPSPQET*STGLLR
Trigger: CCTCAGCAATCCAGTGGAGCAGGTCTCCTGTGGAGA...GGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR GCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTGAGACCCTGATCACTTaGTTCCCACCAAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSETLIT*FPPRGP
Trigger: GGGACCCCTTGGTGGGAAGCAAGTGATCAGGGTCTC...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGCTCTGTGGGGGTCATTaGCAGGCGGCCATTACCACC +
Preference number: 4 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQLCGGH*QAAITT
Trigger: GGTGGTAATGGCCGCCTGGCAATGACCCCCACAGAG...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACGATGAGAATGGTATaGCATCCACGGCAAGACAGG +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHTMRMV*HPRQDR
Trigger: CCTGTCTTGCCGTGGATGGCATACCATTCTCATCGT...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACGAATGCATCCCCACCTaGTGCCCTCCTTCTAATTTC +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHECIPT*CPPSNF
Trigger: GAAATTAGAAGGAGGGCAGCAGGTGGGGATGCATTC...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCAAAGCCAGGAAAGCTaGTCTCTGCATTCGGTAAGT +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGQSQES*SLHSVS
Trigger: ACTTACCGAATGCAGAGAGCAGCTTTCCTGGCTTTG...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCACTCCCAGGGTTTGGTaGTGGCTTTGGGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISTPRVW*WLWATQ
Trigger: CTGAGTGGCCCAAAGCCAGCACCAAACCCTGGGAGT...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GTACGCAGTAATAGAACCAGGAAAGAAAGCCCACAGAGAATCATGATGTGGAGGTATGCCCGGAGGCCCTaGCCGCGCTGCGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: VRSNRTRKESPQRIMMWRYARRP*PRCVPL
Trigger: GAGCGGGACGCAGCGCGGCCAGGGCCTCCGGGCATA...CCTCCACATCATGATTCTCTGTGGGCTTTCTTTCCTGGTTCTATTACTGCGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS-3UTR CCA 90 bp GTCTCCATGGCCCAGCTGACCATGGAGTTTAGTGCCTCCTTGCATGTTCACCCAGGCCCAGGACGCGGATaGGGATGTAGTGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VSMAQLTMEFSASLHVHPGPGRG*GCSAVP
Trigger: AGGAACTGCACTACATCCCCATCCGCGTCCTGGGCC...TGGGTGAACATGCAAGGAGGCACTAAACTCCATGGTCAGCTGGGCCATGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CCA 90 bp AGTAGGTCTCTGCTCAGGATCCTGGTCAAGGCACGAATGAACCATTTGGATCAATGCGGCGGTACAGCGTaGCTTCCCCGAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: SRSLLRILVKARMNHLDQCGGTA*LPRRRR
Trigger: GCGGCGCCTTCGGGGAAGCCACGCTGTACCGCCGCA...TTGATCCAAATGGTTCATTCGTGCCTTGACCAGGATCCTGAGCAGAGACCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGTGGAGACATGTAATATaGGGTTCCCACAAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGWRHVI*GSHKRL
Trigger: GAGACGCTTGTGGGAACCCCATATTACATGTCTCCA...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCAGTGACCACAGCAAAGTaGGTATTCCCTGCACAGACC +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPVTTAK*VFPAQT
Trigger: GGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCAC...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTACAAAGCCAGGGCCATaGGGGCCCTTCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSTKPGP*GPFHSP
Trigger: TGGAGAATGGAAGGGCCCCCATGGCCCTGGCTTTGT...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCGAGCTGCTGTTGCTATaGCAGTCACTGATGACAAAG +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPAELLLL*QSLMTK
Trigger: CTTTGTCATCAGTGACTGCCATAGCAACAGCAGCTC...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGGTTTGGTGCTGGCTTTaGGCCACTCAGGTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMVWCWL*ATQVGK
Trigger: TTTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAAC...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCCCAGGGTTTGGTGCTaGCTTTGGGCCACTCAGGTA +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISPRVWC*LWATQV
Trigger: TACCTGAGTGGCCCAAAGCCAGCACCAAACCCTGGG...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTGCCTGTCCCGAGCAATaGGGTTCTCCCCAAGCATCA +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSACPEQ*GSPQAS
Trigger: TGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGC...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACGGCAAGAGTAAGCTGTaGCCAAGGTCACAAAATGGC +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHGKSKL*PRSQNG
Trigger: GCCATTTTGTGACCTTGGCCACAGCTTACTCTTGCC...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR CCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTTTGGCGGGCGCGTGGTaGGAACCGCGTGGAACCGAA +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASLAGAW*EPRGTE
Trigger: TTCGGTTCCACGCGGTTCCCACCACGCGCCCGCCAA...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS-3UTR TCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCTCCCAAAGTCCGAGTTaGTGGAATCGCAGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPSQSPS*WNRSVA
Trigger: AGCGACACTGCGATTCCATCAACTCGGACTTTGGGA...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678037.1
CDS-3UTR TCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCCTCTCCTGCGTTTCCTaGGAAGAGGGCGATCTAGAA +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPLSCVS*EEGDLE
Trigger: TTCTAGATCGCCCTCTTCTCAGGAAACGCAGGAGAG...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACGACTTCACTGGTTCGTaGTGTTACTACAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHDFTGS*CYYSNG
Trigger: CCCATTGCTGTAGTAACATCACGAACCAGTGAAGTC...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCAGCTGCATGGGTTCTAGCACTTCAGGGCCAGCAACTTTGTCCACCCCCATGCTCTCCATGGCCCAGCTaGCCATGGAGTTTAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SAAWVLALQGQQLCPPPCSPWPS*PWSLVP
Trigger: AGGCACTAAACTCCATGGTCAGCTGGGCCATGGAGA...GCATGGGGGTGGACAAAGTTGCTGGCCCTGAAGTGCTAGAACCCATGCAGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
CDS-3UTR TCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGGCAGCCATAATAATCTaGTCCGAAGGCATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMAAIII*SEGIEL
Trigger: CAGCTCTATGCCTTCGGATCAGATTATTATGGCTGC...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCGGCCAGCACTTTGCCTaGCTGGGTCAACAGAAATGT +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPGQHFA*LGQQKC
Trigger: ACATTTCTGTTGACCCAGTCAGGCAAAGTGCTGGCC...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTCTGCATTTTCCAGCTCCTTTCGAAGCCAGCCAGGACAGGAGCTGCTGGCCCCCCCGGGCTAGAGCTCTaGAACACAGTTCCAATGGAT +
Preference number: 4 (lower is better)
Translates to: FCIFQLLSKPARTGAAGPPGLEL*NTVPMD
Trigger: ATCCATTGGAACTGTGTTTCAGAGCTCTAGCCCGGG...GGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCCCCGGGCTAGAGCTCTaGAACACAGTTCCAATGGAT +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPPGLEL*NTVPMD
Trigger: ATCCATTGGAACTGTGTTTCAGAGCTCTAGCCCGGG...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCATCTTTCTCAGATTCTaGAAACGCTGCACTGAGAGG +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPAIFLRF*KRCTER
Trigger: CCTCTCAGTGCAGCGTTTTCAGAATCTGAGAAAGAT...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGTGGGATCAACAGATaGGGTACAGAGCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTGGINR*GTELLL
Trigger: CAACAGCAGCTCTGTACCTCATCTGTTGATCCCACC...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTCTGCATTTTCCAGCTCCTTTCGAAGCCAGCCAGGACAGGAGCTGCTGGCCCCGGTGGGATCAACAGATaGGGTACAGAGCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: FCIFQLLSKPARTGAAGPGGINR*GTELLL
Trigger: CAACAGCAGCTCTGTACCTCATCTGTTGATCCCACC...GGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACCCAGCGCAATTAAGGTaGGCACTGTGTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHPAQLR*ALCLLF
Trigger: GAAGAGGAGACACAGTGCTCACCTTAATTGCGCTGG...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACCTCTTAAGGCTATTCTaGCTGCCCCATGGACTCAAT +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHLLRLF*LPHGLN
Trigger: ATTGAGTCCATGGGGCAGTCAGAATAGCCTTAAGAG...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTCACTGTTACAGTTTATaGCAACCCCCGCAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTHCYSL*QPPQVP
Trigger: GGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTG...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCTACTCCATCCCCCTTTaGACTGGTTTCTGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPAYSIPL*TGFCLH
Trigger: ATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTA...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCATGCACAGGCTTACTaGAGCACAGTACTGATTAAG +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGHAQAY*STVLIK
Trigger: CTTAATCAGTACTGTGCTTCAGTAAGCCTGTGCATG...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCATGCACTCCAGCCTGGTaGCCTAGTAAGAATCCATCT +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPCTPAW*PSKNPS
Trigger: AGATGGATTCTTACTAGGTCACCAGGCTGGAGTGCA...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR TCA 90 bp CTGGGGGCTCTACAGGCTCAGGAGACTAGAGGCTGGGTCTACAGGAGTCTGTTCAGGTGGTGGTTGCAATaGGCCCAGATCATGCCATTG +
Preference number: 4 (lower is better)
Translates to: LGALQAQETRGWVYRSLFRWWLQ*AQIMPL
Trigger: CAATGGCATGATCTGGGCTCATTGCAACCACCACCT...GAACAGACTCCTGTAGACCCAGCCTCTAGTCTCCTGAGCCTGTAGAGCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR GCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGCCCGCTCGCTTCAGATaGCGGCCCGCGGATCCGTCA +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQPARFR*RPADPS
Trigger: TGACGGATCCGCGGGCCGGCATCTGAAGCGAGCGGG...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678531.1
CDS-3UTR GCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGGTCGTGCTGCAGCAGTaGCAGAATAACAATCTCATT +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGVVLQQ*QNNNLI
Trigger: AATGAGATTGTTATTCTGGCACTGCTGCAGCACGAC...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTAAAGTGGGTATTCCCTaGACAGACCTGCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSKVGIP*TDLPGT
Trigger: AGTGCCCGGCAGGTCTGTGCAGGGAATACCCACTTT...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCAGTTTAGTGCCTCCTTaGATGTTCACCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPASLVPP*MFTQVY
Trigger: GTACACTTGGGTGAACATGCAAGGAGGCACTAAACT...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CACATGCTTTGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACCATGGCTGCCCACACTTGTTaGAGCCAAAGGTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: HMLWLSIGGFVSMAQLTMAAHTC*SQRSAA
Trigger: GGCTGCTGACCTTTGGCTGCAACAAGTGTGGGCAGC...CATGGTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCAAAGCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR GCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGGCTGCCCACACTTGTTaGAGCCAAAGGTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGAAHTC*SQRSAA
Trigger: GGCTGCTGACCTTTGGCTGCAACAAGTGTGGGCAGC...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCAATGGATAAGCCACTaGTATTGGAACGGATGGTCT +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGQWISH*YWNGWS
Trigger: AGACCATCCGTTCCAATAGCAGTGGCTTATCCATTG...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGAGCCAGGACAGGAGCTaGTGGCCCCATTACTGTTCC +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGSQDRS*WPHYCS
Trigger: GGAACAGTAATGGGGCCAGCAGCTCCTGTCCTGGCT...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGTTTAACACCAGACCCTaGAATCTCTCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMFNTRP*NLSTST
Trigger: GGTGGAGGTTGAGAGATTGCAGGGTCTGGTGTTAAA...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCAATGTACAAGGAAAGTaGTTCAGAGCCTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPANVQGK*FRASAL
Trigger: CAAGGCAGAGGCTCTGAAGCACTTTCCTTGTACATT...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGACTCCCAGGGTTTGGTaGTGGCTTTGGGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGTPRVW*WLWATQ
Trigger: CTGAGTGGCCCAAAGCCAGCACCAAACCCTGGGAGT...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCACCTTCTCAGCAACCTaGCCATGTCCATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPTFSAT*PCPSAP
Trigger: TGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGGT...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGGATTATAGCCCACTCTaGCCTGACCATCATGAATAC +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGDYSPL*PDHHEY
Trigger: GTATTCATGATGGTCAGGGCAGAGTGGGCTATAATC...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp CCACCATCAGTACGCAGTAATAGAACCAGGAAAGAAAGCCCACAGAGAATCATGTGCGGCGGTACAGCGTaGCTTCCCCGAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: PPSVRSNRTRKESPQRIMCGGTA*LPRRRR
Trigger: GCGGCGCCTTCGGGGAAGCCACGCTGTACCGCCGCA...CATGATTCTCTGTGGGCTTTCTTTCCTGGTTCTATTACTGCGTACTGATGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS-3UTR CCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGTCCTTGACAGAGCTCTaGAGACATGTAATATGGGGT +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGSLTEL*RHVIWG
Trigger: ACCCCATATTACATGTCTCCAGAGCTCTGTCAAGGA...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGAGCACTTTGCCTGACTaGGTCAACAGAAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMSTLPD*VNRNVP
Trigger: TGGGACATTTCTGTTGACCCAGTCAGGCAAAGTGCT...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCCAGGAGACTAGAGGCTaGGTCTACAGGAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPQETRG*VYRSLF
Trigger: GAACAGACTCCTGTAGACCCAGCCTCTAGTCTCCTG...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGGACTCCCAGGGTTTaGTGCTGGCTTTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALGTPRV*CWLWAT
Trigger: AGTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCC...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CAA 72 bp AGATATCAGAGCCATGTGGTCTCTCTGTGGGGGTCATaGCCAGGCGGCCATTACCACCATTGCCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: RYQSHVVSLWGS*PGGHYHHCPRQ
Trigger: TTGCCTGGGGCAATGGTGGTAATGGCCGCCTGGCAATGACCCCCACAGAGAGACCACATGGCTCTGATATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACTTGTACTTTACTCCTTaGCAGAGCTCTGGAGACATG +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHLYFTP*QSSGDM
Trigger: CATGTCTCCAGAGCTCTGTCAAGGAGTAAAGTACAA...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCGTTCCTTCTCCACTGTaGCCACAGCAAAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPVPSPL*PQQSGY
Trigger: ATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAAC...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGTCTCCATGGCCCAGCTaGCCATGGAGTTTAGTGCCT +
Preference number: 4 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQSPWPS*PWSLVP
Trigger: AGGCACTAAACTCCATGGTCAGCTGGGCCATGGAGA...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCAGCTGCATGGGTTCTAGCACTTCAGGGCCAGCAACTTTGTCCACCCCCATGCTCACCACATGACACCTaGCGGATAGCTTTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: SAAWVLALQGQQLCPPPCSPHDT*RIALPC
Trigger: GCAAGGCAAAGCTATCCGTCAGGTGTCATGTGGTGA...GCATGGGGGTGGACAAAGTTGCTGGCCCTGAAGTGCTAGAACCCATGCAGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
CDS-3UTR TCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACCAGTCACACAGACAGTaGAATCATCACCACATGACA +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHQSHRQ*NHHHMT
Trigger: TGTCATGTGGTGATGATTTCACTGTCTGTGTGACTG...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGTCAGAACCACCACATaGTTATCTCCACAGGAGACC +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTVRTTT*LSPQET
Trigger: GGTCTCCTGTGGAGATAATCATGTGGTGGTTCTGAC...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCTCAATAGCAGCTGTGTaGGTCTTGCCTGGGGCAATG +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISSIAAV*VLPGAM
Trigger: CATTGCCCCAGGCAAGACTCACACAGCTGCTATTGA...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCAGCTGCATGGGTTCTAGCACTTCAGGGCCAGCAACTTTGTCCACCCCCATGCAATAGGCCGAGGCCATaGGGTACAGATATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SAAWVLALQGQQLCPPPCNRPRP*GTDIRA
Trigger: GGCTCTGATATCTGTACCTCATGGCCTCGGCCTATT...GCATGGGGGTGGACAAAGTTGCTGGCCCTGAAGTGCTAGAACCCATGCAGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCAGACAGGTCCGGGACATaGTGCAGAGATCCAAAAATA +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPDRSGT*CRDPKI
Trigger: TATTTTTGGATCTCTGCATCATGTCCCGGACCTGTC...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGATACTTTCTCAACGATaGGAATGGTATGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGILSQR*EWYAIH
Trigger: GTGGATGGCATACCATTCTCATCGTTGAGAAAGTAT...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACATCTTTCTCAGATTCTaGAAACGCTGCACTGAGAGG +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHIFLRF*KRCTER
Trigger: CCTCTCAGTGCAGCGTTTTCAGAATCTGAGAAAGAT...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGAGGATTCAGCCGAGGTaGCGAGGCTTCTACTTGGGG +
Preference number: 4 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALRIQPR*RGFYLG
Trigger: CCCCAAGTAGAAGCCTCGTCACCTCGGCTGAATCCT...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTTCGGTAAGTGTGCTGTaGAGTTCTTTGGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTSVSVL*SSLGPS
Trigger: ACTGGGACCCAAAGAACTTCACAGCACACTTACCGA...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGTCATGGGCAGAAGACTaGGAGCCCTCTAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQSWAED*EPSKPS
Trigger: AGAGGGCTTAGAGGGCTCTCAGTCTTCTGCCCATGA...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACCAAAGAAGATCCCATTaGACAGAGTTGCCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHQRRSH*TELPVP
Trigger: CGGGACAGGCAACTCTGTTCAATGGGATCTTCTTTG...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCACCATCAGTACGCAGTAATAGAACCAGGAAAGAAAGCCCACAGAGAATCATGCCCGCTCGCTTCAGATaGCGGCCCGCGGATCCGTCA +
Preference number: 4 (lower is better)
Translates to: PPSVRSNRTRKESPQRIMPARFR*RPADPS
Trigger: TGACGGATCCGCGGGCCGGCATCTGAAGCGAGCGGG...CATGATTCTCTGTGGGCTTTCTTTCCTGGTTCTATTACTGCGTACTGATGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS-3UTR GCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTGTGAGTCATCCTCGGTaGGGCGGTACAGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASVSHPR*GGTAWL
Trigger: AAGCCACGCTGTACCGCCGCACCGAGGATGACTCAC...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678037.1
CDS-3UTR GCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCTCTGCAGTAGGTCTCTaGTCAGGATCCTGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISSAVGL*SGSWSR
Trigger: CCTTGACCAGGATCCTGAGCAGAGACCTACTGCAGA...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTTTCCCTGCACAGACCTaGCGGGCACTACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASFPAQT*RALQPL
Trigger: GAGTGGCTGTAGTGCCCGGCAGGTCTGTGCAGGGAA...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCGGATAGCTTTGCCTTaGAACTTTTCCACATGCTTT +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPARIALP*NFSTCF
Trigger: AAAGCATGTGGAAAAGTTGCAAGGCAAAGCTATCCG...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATGCTGCCCACACTTGTTaGAGCCAAAGGTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHAAHTC*SQRSAA
Trigger: GGCTGCTGACCTTTGGCTGCAACAAGTGTGGGCAGC...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACCATGGAGTTTAGTGAGACCCTGATCACTTaGTTCCCACCAAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: WLSIGGFVSMAQLTMEFSETLIT*FPPRGP
Trigger: GGGACCCCTTGGTGGGAAGCAAGTGATCAGGGTCTC...ACTAAACTCCATGGTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR GCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCCTCTGTGGGGGTCATTaGCAGGCGGCCATTACCACC +
Preference number: 4 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTLCGGH*QAAITT
Trigger: GGTGGTAATGGCCGCCTGGCAATGACCCCCACAGAG...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCATGGGGATAAATTCTaGATTTTCCAGCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGHGDKF*IFQLLS
Trigger: CGAAAGGAGCTGGAAAATGCAGAATTTATCCCCATG...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCGAATGCATCCCCACCTaGTGCCCTCCTTCTAATTTC +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPECIPT*CPPSNF
Trigger: GAAATTAGAAGGAGGGCAGCAGGTGGGGATGCATTC...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGTGGCAAAATTTCCATTaGACAAGACCTCCCACAATG +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGWQNFH*TRPPTM
Trigger: CATTGTGGGAGGTCTTGTGCAATGGAAATTTTGCCA...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACCTTTTCCACATGCTTTaGCTGTCGATAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHLFHML*LSIGGF
Trigger: AAAGCCTCCTATCGACAGCCAAAGCATGTGGAAAAG...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACTCTTGCCTGGGGCAATaGTACGGATCTTATAAAAGG +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHSCLGQ*YGSYKR
Trigger: CCTTTTATAAGATCCGTACCATTGCCCCAGGCAAGA...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTTGTGTGAGTCTTGCCTaGGGCAATGGTACGGATCTT +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTCVSLA*GNGTDL
Trigger: AAGATCCGTACCATTGCCCCAGGCAAGACTCACACA...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCTGTGTGAGTCTTGCCTaGGGCAATGGTACGGATCTT +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPCVSLA*GNGTDL
Trigger: AAGATCCGTACCATTGCCCCAGGCAAGACTCACACA...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCCATGTGGTCTCTCTGTaGGGGTCATTGCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTHVVSL*GSLPGG
Trigger: GCCGCCTGGCAATGACCCCCACAGAGAGACCACATG...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AAACTCATCACCGCAGGAGACCCTGATCACTTGCTTCCCACCAAGGGGTCCCCCGATATCAGAGCCATGTaGTCTCTCTGTGGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: KLITAGDPDHLLPTKGSPDIRAM*SLCGGH
Trigger: ATGACCCCCACAGAGAGACCACATGGCTCTGATATC...GGGGGACCCCTTGGTGGGAAGCAAGTGATCAGGGTCTCCTGCGGTGATGAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACTCGGAAGCCTCCACTTaGGTCAGGAGTTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHSEAST*VRSFRF
Trigger: GAATCTGAAACTCCTGACCCAAGTGGAGGCTTCCGA...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATCGCAGGAGGAGTCAGTaGTGTTCCCTTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHRRRSQ*CSLPST
Trigger: TGTGCTGGGAAGGGAACACCACTGACTCCTCCTGCG...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGTGCTGTGAAGTTCTTTaGGTCCCAGTCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGCCEVL*VPVSWG
Trigger: CCCCCAGGAGACTGGGACCCAAAGAACTTCACAGCA...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGTCTCCTCTTCAAAGGTaGGATCAACAGATGAGGTAC +
Preference number: 4 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMSPLQR*DQQMRY
Trigger: GTACCTCATCTGTTGATCCCACCTTTGAAGAGGAGA...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACAATCCCACCCTGCATTaGTCACAGCCTGAAACACCA +
Preference number: 4 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHNPTLH*SQPETP
Trigger: TGGTGTTTCAGGCTGTGACCAATGCAGGGTGGGATT...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCATTCAGAAAGAAAGTaGTTGGGGCTGCTGATATCA +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGHSERK*LGLLIS
Trigger: TGATATCAGCAGCCCCAACCACTTTCTTTCTGAATG...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGCCCAGGGTTTGGTGCTaGCTTTGGGCCACTCAGGTA +
Preference number: 4 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALPRVWC*LWATQV
Trigger: TACCTGAGTGGCCCAAAGCCAGCACCAAACCCTGGG...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACAGGGACTCCCAGGGTTTaGTGCTGGCTTTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETGTPRV*CWLWAT
Trigger: AGTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCC...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACCGGAGGCTTAGAATCTaGATGTTTTATCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHRRLRI*MFYPQR
Trigger: TCTCTGGGGATAAAACATCCAGATTCTAAGCCTCCG...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTCTCTGTCGCCCAGGCTaGAGTACCGTGGCGCAATCT +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASLCRPG*STVAQS
Trigger: AGATTGCGCCACGGTACTCCAGCCTGGGCGACAGAG...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR TCA 90 bp GTCAACTTCCATGGCCCGAATTCCTTGCACGATCTTCACACACAGGTTAAGTGGCTTCCACACAACCAGTaGGTCATCCTCGGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: VNFHGPNSLHDLHTQVKWLPHNQ*VILGAA
Trigger: CGCCGCACCGAGGATGACTCACTGGTTGTGTGGAAG...CCACTTAACCTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCATGGAAGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR TCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCGACTTCACTGGTTCGTaGTGTTACTACAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPDFTGS*CYYSNG
Trigger: CCCATTGCTGTAGTAACATCACGAACCAGTGAAGTC...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTCTGCATTTTCCAGCTCCTTTCGAAGCCAGCCAGGACAGGAGCTGCTGGCCCCGACTTCACTGGTTCGTaGTGTTACTACAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: FCIFQLLSKPARTGAAGPDFTGS*CYYSNG
Trigger: CCCATTGCTGTAGTAACATCACGAACCAGTGAAGTC...GGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp CACATGCTTTGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACCATGTCACCACATGACACCTaGCGGATAGCTTTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: HMLWLSIGGFVSMAQLTMSPHDT*RIALPC
Trigger: GCAAGGCAAAGCTATCCGTCAGGTGTCATGTGGTGA...CATGGTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCAAAGCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
CDS-3UTR TCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCGCAGCCATAATAATCTaGTCCGAAGGCATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPAAIII*SEGIEL
Trigger: CAGCTCTATGCCTTCGGATCAGATTATTATGGCTGC...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGGCTCCACTGGATTGCTaGGGAAGAAGTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGAPLDC*GRSSAA
Trigger: TGCAGCTGAACTTCTTCCTCAGCAATCCAGTGGAGC...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTGTCAGAACCACCACATaGTTATCTCCACAGGAGACC +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSVRTTT*LSPQET
Trigger: GGTCTCCTGTGGAGATAATCATGTGGTGGTTCTGAC...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGCCATCACAGCCACATTaGACTGCAACAATAATCAAG +
Preference number: 4 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMPSQPH*TATIIK
Trigger: CTTGATTATTGTTGCAGTTCAATGTGGCTGTGATGG...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGGGCCAGCACTTTGCCTaGCTGGGTCAACAGAAATGT +
Preference number: 4 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQGQHFA*LGQQKC
Trigger: ACATTTCTGTTGACCCAGTCAGGCAAAGTGCTGGCC...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCCACCGCAGGAGACCCTaGTCACTTGCTTCCCACCAA +
Preference number: 4 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTHRRRP*SLASHQ
Trigger: TTGGTGGGAAGCAAGTGATCAGGGTCTCCTGCGGTG...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTCCCCAGGCAAAAATGTaGTTATCATCAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTPQAKM*LSSVAA
Trigger: TGCTGCCACTGATGATAATCACATTTTTGCCTGGGG...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAATAGGCCGAGGCCATaGGGTACAGATATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQNRPRP*GTDIRA
Trigger: GGCTCTGATATCTGTACCTCATGGCCTCGGCCTATT...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACATACTTTCTCAACGATaGGAATGGTATGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHILSQR*EWYAIH
Trigger: GTGGATGGCATACCATTCTCATCGTTGAGAAAGTAT...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCCGGGCTAGAGCTCTaGAACACAGTTCCAATGGAT +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGPGLEL*NTVPMD
Trigger: ATCCATTGGAACTGTGTTTCAGAGCTCTAGCCCGGG...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp AAACTCATCACCGCAGGAGACCCTGATCACTTGCTTCCCACCAAGGGGTCCCCCGTTTCAGATTCCTGCTaGCTGTCCTCTTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: KLITAGDPDHLLPTKGSPVSDSC*LSSSSP
Trigger: TGGTGAAGAAGAGGACAGTCAGCAGGAATCTGAAAC...GGGGGACCCCTTGGTGGGAAGCAAGTGATCAGGGTCTCCTGCGGTGATGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTCAGAGGCCACTTTaGGTCCTTGCAGCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISLQRPL*VLAALH
Trigger: ATGAAGAGCTGCAAGGACTCAAAGTGGCCTCTGAAG...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTATGGGCGGGCCACACCTaGTTCCAGCCCACTCCAACT +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLWAGHT*FQPTPT
Trigger: AGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCA...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTTCCACATGCTTTGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACTCATGGGCAGAAGACTaGGAGCCCTCTAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: FPHALAVDRRLCLHGPADSWAED*EPSKPS
Trigger: AGAGGGCTTAGAGGGCTCTCAGTCTTCTGCCCATGA...GTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCAAAGCATGTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGTCATGGGCAGAAGACTaGGAGCCCTCTAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALSWAED*EPSKPS
Trigger: AGAGGGCTTAGAGGGCTCTCAGTCTTCTGCCCATGA...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTCAAAGAAGATCCCATTaGACAGAGTTGCCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSQRRSH*TELPVP
Trigger: CGGGACAGGCAACTCTGTTCAATGGGATCTTCTTTG...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACGTTGCATTTACATGCTaGACCAAAACCCACTGTTAC +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHVAFTC*TKTHCY
Trigger: GTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAAC...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCACATGCACAGGCTTACTaGAGCACAGTACTGATTAAG +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPHAQAY*STVLIK
Trigger: CTTAATCAGTACTGTGCTTCAGTAAGCCTGTGCATG...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp CAGCTGACCATGGAGTTTAGTGCCTCCTTGCATGTTCACCCAAGTGTACAGTTCGTGAGTCATCCTCGGTaGGGCGGTACAGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: QLTMEFSASLHVHPSVQFVSHPR*GGTAWL
Trigger: AAGCCACGCTGTACCGCCGCACCGAGGATGACTCAC...GAACTGTACACTTGGGTGAACATGCAAGGAGGCACTAAACTCCATGGTCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR GCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTATGGCCCGAATTCCTTaGACGATCTTCACACACAGG +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSMARIP*TIFTHR
Trigger: CCTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCAT...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACGTGCTTCAGTCACAGTaGTTGACCTTGGTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHVLQSQ*LTLVSL
Trigger: CAAAGAGACCAAGGTCAAGCACTGTGACTGAAGCAC...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCAAGTTTAGTGCCTCCTTaGATGTTCACCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPSLVPP*MFTQVY
Trigger: GTACACTTGGGTGAACATGCAAGGAGGCACTAAACT...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGCGGATAGCTTTGCCTTaGAACTTTTCCACATGCTTT +
Preference number: 4 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMRIALP*NFSTCF
Trigger: AAAGCATGTGGAAAAGTTGCAAGGCAAAGCTATCCG...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCACAGGCCAGCACTTTaGCTGACTGGGTCAACAGAA +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGHRPAL*LTGSTE
Trigger: TTCTGTTGACCCAGTCAGGCAAAGTGCTGGCCTGTG...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCATTCCCAACGCCCAGCTaGCCACACTTGTTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPFPTPS*PHLLQP
Trigger: TGGCTGCAACAAGTGTGGGCAGCTGGGCGTTGGGAA...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACAGAGACCCTGATCACTTaGTTCCCACCAAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETETLIT*FPPRGP
Trigger: GGGACCCCTTGGTGGGAAGCAAGTGATCAGGGTCTC...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTTTCCATTCCTCGGTCTaGTTCCATTGTTCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTFHSSV*FHCSSE
Trigger: TTCCGAGGAACAATGGAAGCAGACCGAGGAATGGAA...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACTTCCATTCCTCGGTCTaGTTCCATTGTTCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHFHSSV*FHCSSE
Trigger: TTCCGAGGAACAATGGAAGCAGACCGAGGAATGGAA...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCTTTAACACCAGACCCTaGAATCTCTCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPFNTRP*NLSTST
Trigger: GGTGGAGGTTGAGAGATTGCAGGGTCTGGTGTTAAA...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACTTCTCATTTAGGGGCTaGATGATGGGTTTAGATGCA +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHFSFRG*MMGLDA
Trigger: TGCATCTAAACCCATCATGCAGCCCCTAAATGAGAA...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CCA 90 bp ATAGCATGTACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGATGCGGCGGTACAGCGTaGCTTCCCCGAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: IACTLCGWLLFLHTMPMRCGGTA*LPRRRR
Trigger: GCGGCGCCTTCGGGGAAGCCACGCTGTACCGCCGCA...TCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCTGGAGACATGTAATATaGGGTTCCCACAAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPWRHVI*GSHKRL
Trigger: GAGACGCTTGTGGGAACCCCATATTACATGTCTCCA...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGCACACACAGGTTAAGTaGGTTTGTAGCATCAAACGT +
Preference number: 4 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMHTQVK*VCSIKR
Trigger: ACGTTTGATGCTACAAACCCACTTAACCTGTGTGTG...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TGCACAGACCTGCCGGGCACTACAGCCACTCTTGATAACATCCAGTTTCTGGGGGTGACCACAGCAAAGTaGGTATTCCCTGCACAGACC +
Preference number: 4 (lower is better)
Translates to: CTDLPGTTATLDNIQFLGVTTAK*VFPAQT
Trigger: GGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCAC...CCCCAGAAACTGGATGTTATCAAGAGTGGCTGTAGTGCCCGGCAGGTCTGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCAGAAGTTCAGCTGCATaGGTTCTAGCACTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISRSSAA*VLALQG
Trigger: GCCCTGAAGTGCTAGAACCCATGCAGCTGAACTTCT...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTAGCACTTTGCCTGACTaGGTCAACAGAAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTSTLPD*VNRNVP
Trigger: TGGGACATTTCTGTTGACCCAGTCAGGCAAAGTGCT...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCTCATGGTATGCTTCATaGTTGATAATTCCCGACATG +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPASWYAS*LIIPDM
Trigger: CATGTCGGGAATTATCAACCATGAAGCATACCATGA...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CGCATGGCACAAATTGGGTGGGGTTTAGAATCAGATGCTCCTCCAGATGGGAATCATGTGGTCTCTCTGTaGGGGTCATTGCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RMAQIGWGLESDAPPDGNHVVSL*GSLPGG
Trigger: GCCGCCTGGCAATGACCCCCACAGAGAGACCACATG...ATTCCCATCTGGAGGAGCATCTGATTCTAAACCCCACCCAATTTGTGCCATGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR CCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCCGCAGGAGGAGTCAGTaGTGTTCCCTTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTRRRSQ*CSLPST
Trigger: TGTGCTGGGAAGGGAACACCACTGACTCCTCCTGCG...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTGTCTGAGTTCCTTTaGAATGCATCCCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISLSEFL*NASPPA
Trigger: AGCAGGTGGGGATGCATTCCAAAGGAACTCAGACAG...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGCAGGAGACTAGAGGCTaGGTCTACAGGAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQQETRG*VYRSLF
Trigger: GAACAGACTCCTGTAGACCCAGCCTCTAGTCTCCTG...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCAGGAGACTAGAGGCTaGGTCTACAGGAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGQETRG*VYRSLF
Trigger: GAACAGACTCCTGTAGACCCAGCCTCTAGTCTCCTG...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACAACAAAGCCAGGGCCATaGGGGCCCTTCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETTKPGP*GPFHSP
Trigger: TGGAGAATGGAAGGGCCCCCATGGCCCTGGCTTTGT...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCGAGCTGCTGTTGCTATaGCAGTCACTGATGACAAAG +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPELLLL*QSLMTK
Trigger: CTTTGTCATCAGTGACTGCCATAGCAACAGCAGCTC...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACGAGCTGCTGTTGCTATaGCAGTCACTGATGACAAAG +
Preference number: 4 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHELLLL*QSLMTK
Trigger: CTTTGTCATCAGTGACTGCCATAGCAACAGCAGCTC...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCATCTCCTCTTCAAAGGTaGGATCAACAGATGAGGTAC +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPSPLQR*DQQMRY
Trigger: GTACCTCATCTGTTGATCCCACCTTTGAAGAGGAGA...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCGGTGAAAATGATACATaGGATATAAGCTGCTACCAG +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPAGENDT*DISCYQ
Trigger: CTGGTAGCAGCTTATATCCCATGTATCATTTTCACC...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGTCCCAGGCACAATATaGGAAAGTGCAAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTVPGTI*ESANCL
Trigger: GAGACAGTTTGCACTTTCCCATATTGTGCCTGGGAC...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TTCTGCATTTTCCAGCTCCTTTCGAAGCCAGCCAGGACAGGAGCTGCTGGCCCCCTGTCTGAGTTCCTTTaGAATGCATCCCCACCTGTA +
Preference number: 4 (lower is better)
Translates to: FCIFQLLSKPARTGAAGPLSEFL*NASPPV
Trigger: TACAGGTGGGGATGCATTCCAAAGGAACTCAGACAG...GGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCCAGTCACACAGACAGTaGAATCATCACCACATGACA +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPQSHRQ*NHHHMT
Trigger: TGTCATGTGGTGATGATTTCACTGTCTGTGTGACTG...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACCAGTCACACAGACAGTaGAATCATCACCACATGACA +
Preference number: 4 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHQSHRQ*NHHHMT
Trigger: TGTCATGTGGTGATGATTTCACTGTCTGTGTGACTG...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACCATGGAGTTTAGTGCTCCACTGGATTGCTaGGGAAGAAGTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: WLSIGGFVSMAQLTMEFSAPLDC*GRSSAA
Trigger: TGCAGCTGAACTTCTTCCTCAGCAATCCAGTGGAGC...ACTAAACTCCATGGTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
CDS-3UTR TCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGGTCAGAACCACCACATaGTTATCTCCACAGGAGACC +
Preference number: 4 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQVRTTT*LSPQET
Trigger: GGTCTCCTGTGGAGATAATCATGTGGTGGTTCTGAC...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GTCTCCATGGCCCAGCTGACCATGGAGTTTAGTGCCTCCTTGCATGTTCACCCAGTCAGAACCACCACATaGTTATCTCCACAGGAGACC +
Preference number: 4 (lower is better)
Translates to: VSMAQLTMEFSASLHVHPVRTTT*LSPQET
Trigger: GGTCTCCTGTGGAGATAATCATGTGGTGGTTCTGAC...TGGGTGAACATGCAAGGAGGCACTAAACTCCATGGTCAGCTGGGCCATGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR TCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATAATAGGCCGAGGCCATaGGGTACAGATATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHNRPRP*GTDIRA
Trigger: GGCTCTGATATCTGTACCTCATGGCCTCGGCCTATT...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGAATAGGCCGAGGCCATaGGGTACAGATATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALNRPRP*GTDIRA
Trigger: GGCTCTGATATCTGTACCTCATGGCCTCGGCCTATT...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCAGTGGCAGCAATGGTAAACTCATCACCGCAGGAGACCCTGATCACTTGCTTCCTGAAAACGCTGCACTaGGAGGAGATGGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SVAAMVNSSPQETLITCFLKTLH*EEMGCQ
Trigger: CTGACAGCCCATCTCCTCTCAGTGCAGCGTTTTCAG...GAAGCAAGTGATCAGGGTCTCCTGCGGTGATGAGTTTACCATTGCTGCCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTTCTTCCTTTGCTGTCTaGGTTCCTTTGGAATGCATC +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTSSFAV*VPLECI
Trigger: GATGCATTCCAAAGGAACTCAGACAGCAAAGGAAGA...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGAAACAAGCCCTAGATTaGCTCCATCAGACATATTTT +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGKQALD*LHQTYF
Trigger: AAAATATGTCTGATGGAGTCAATCTAGGGCTTGTTT...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTCTTAAGGCTATTCTaGCTGCCCCATGGACTCAAT +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISLLRLF*LPHGLN
Trigger: ATTGAGTCCATGGGGCAGTCAGAATAGCCTTAAGAG...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CACATGCTTTGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACCATGAGTGGTTGGGGCTGCTaGTATCAAGATCAGAACCCT +
Preference number: 4 (lower is better)
Translates to: HMLWLSIGGFVSMAQLTMSGWGC*YQDQNP
Trigger: AGGGTTCTGATCTTGATATCAGCAGCCCCAACCACT...CATGGTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCAAAGCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGCAAAGAAGATCCCATTaGACAGAGTTGCCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQQRRSH*TELPVP
Trigger: CGGGACAGGCAACTCTGTTCAATGGGATCTTCTTTG...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCAGGAAAGGCTCCCCTATaGACAAGACCAGGGCACTCA +
Preference number: 4 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPGKAPL*TRPGHS
Trigger: TGAGTGCCCTGGTCTTGTTCATAGGGGAGCCTTTCC...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGATGGCCCGAATTCCTTaGACGATCTTCACACACAGG +
Preference number: 4 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQMARIP*TIFTHR
Trigger: CCTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCAT...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTGTGCTTCAGTCACAGTaGTTGACCTTGGTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSVLQSQ*LTLVSL
Trigger: CAAAGAGACCAAGGTCAAGCACTGTGACTGAAGCAC...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp AGTAGGTCTCTGCTCAGGATCCTGGTCAAGGCACGAATGAACCATTTGGATCAATTCCCTGCACAGACCTaGCGGGCACTACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: SRSLLRILVKARMNHLDQFPAQT*RALQPL
Trigger: GAGTGGCTGTAGTGCCCGGCAGGTCTGTGCAGGGAA...TTGATCCAAATGGTTCATTCGTGCCTTGACCAGGATCCTGAGCAGAGACCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR GCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGCACAGGCCAGCACTTTaGCTGACTGGGTCAACAGAA +
Preference number: 4 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALHRPAL*LTGSTE
Trigger: TTCTGTTGACCCAGTCAGGCAAAGTGCTGGCCTGTG...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGCTCTGTGGGGGTCATTaGCAGGCGGCCATTACCACC +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQLCGGH*QAAITT
Trigger: GGTGGTAATGGCCGCCTGGCAATGACCCCCACAGAG...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCTTCTTGTTCAACTTCTaGAGTTGGGTAAAAATCTGG +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPAFLFNF*SWVKIW
Trigger: CCAGATTTTTACCCAACTGCAGAAGTTGAACAAGAA...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATTCAGAGCCTCTGCCTTaGGCTCCTTTTCTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHSEPLP*APFLQV
Trigger: CACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGA...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACAAGCATCAGCCTTTATaGCACCAGTTTTGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHKHQPL*HQFWRN
Trigger: ATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTT...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATACCTTCTCAGCAACCTaGCCATGTCCATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHTFSAT*PCPSAP
Trigger: TGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGGT...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTAACTTGGCTGTGCTATaGCAGGGAGACCAAATTCAG +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSNLAVL*QGDQIQ
Trigger: CTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTT...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp TGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACCATGGAGTTTAGTAATGAGCCCAGATCATaGCATTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: WLSIGGFVSMAQLTMEFSNEPRS*HCTPAW
Trigger: CCAGGCTGGAGTGCAATGGCATGATCTGGGCTCATT...ACTAAACTCCATGGTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CCA 90 bp GTTTCTTTGCTAGGCCATAATCTCCAAGTTTTATCAGGTTTGCCTTGGTCAGAATGCGGCGGTACAGCGTaGCTTCCCCGAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: VSLLGHNLQVLSGLPWSECGGTA*LPRRRR
Trigger: GCGGCGCCTTCGGGGAAGCCACGCTGTACCGCCGCA...TTCTGACCAAGGCAAACCTGATAAAACTTGGAGATTATGGCCTAGCAAAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554258.1
CDS-3UTR CCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCAAACATAGACTTCACTaGTTCGTGATGTTACTACAG +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPAKHRLH*FVMLLQ
Trigger: CTGTAGTAACATCACGAACCAGTGAAGTCTATGTTT...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTATAACATCCAGTTTCTaGGGGGTGGATTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTITSSF*GVDFPP
Trigger: TGGTGGAAAATCCACCCCCCAGAAACTGGATGTTAT...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATGTGACCACAGCAAAGTaGGTATTCCCTGCACAGACC +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHVTTAK*VFPAQT
Trigger: GGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCAC...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCCTTTTCCACATGCTTTaGCTGTCGATAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPLFHML*LSIGGF
Trigger: AAAGCCTCCTATCGACAGCCAAAGCATGTGGAAAAG...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGAGAAGTTCAGCTGCATaGGTTCTAGCACTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGRSSAA*VLALQG
Trigger: GCCCTGAAGTGCTAGAACCCATGCAGCTGAACTTCT...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTTCTTGCCTGGGGCAATaGTACGGATCTTATAAAAGG +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTSCLGQ*YGSYKR
Trigger: CCTTTTATAAGATCCGTACCATTGCCCCAGGCAAGA...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGTGTGTGAGTCTTGCCTaGGGCAATGGTACGGATCTT +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGCVSLA*GNGTDL
Trigger: AAGATCCGTACCATTGCCCCAGGCAAGACTCACACA...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGTCGGAAGCCTCCACTTaGGTCAGGAGTTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGSEAST*VRSFRF
Trigger: GAATCTGAAACTCCTGACCCAAGTGGAGGCTTCCGA...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGTTCAACTTCTGCAGTTaGGTAAAAATCTGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGFNFCS*VKIWRF
Trigger: AAACCTCCAGATTTTTACCCAACTGCAGAAGTTGAA...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTTGCTGTGAAGTTCTTTaGGTCCCAGTCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASCCEVL*VPVSWG
Trigger: CCCCCAGGAGACTGGGACCCAAAGAACTTCACAGCA...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCATGCTGTGAAGTTCTTTaGGTCCCAGTCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPCCEVL*VPVSWG
Trigger: CCCCCAGGAGACTGGGACCCAAAGAACTTCACAGCA...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACGGTGAAAATGATACATaGGATATAAGCTGCTACCAG +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHGENDT*DISCYQ
Trigger: CTGGTAGCAGCTTATATCCCATGTATCATTTTCACC...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TACAGGAGTCTGTTCCCAGGAGGCACCAGGAATCTGAATCTAAGTCAGGCTTTGCCCAGGGTTTGGTGCTaGCTTTGGGCCACTCAGGTA +
Preference number: 4 (lower is better)
Translates to: YRSLFPGGTRNLNLSQALPRVWC*LWATQV
Trigger: TACCTGAGTGGCCCAAAGCCAGCACCAAACCCTGGG...CAAAGCCTGACTTAGATTCAGATTCCTGGTGCCTCCTGGGAACAGACTCCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCTTATGCCACCAGTTTTaGAGAAATGGCAAAATTTCC +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPALCHQF*RNGKIS
Trigger: GGAAATTTTGCCATTTCTCCAAAACTGGTGGCATAA...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCACATCCCCCTTTGAACTaGTTTCTGTTTGCATACTTG +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPHPPLN*FLFAYL
Trigger: CAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATG...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CAA 72 bp CTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTaGGTGCTGGCTTTGGGCCACTCAGGTAGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: LPVLLGFRDSQG*VLALGHSGRKN
Trigger: ATTTTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CAA 72 bp GGATTCAGCCGAGGTGACGAGGCTTCTACTTGGGGTTaGTGTTCCAAAGGAGCTTCAGAGGCCACTTTGAGT +
Preference number: 4 (lower is better)
Translates to: GFSRGDEASTWG*CSKGASEATLS
Trigger: ACTCAAAGTGGCCTCTGAAGCTCCTTTGGAACACAAACCCCAAGTAGAAGCCTCGTCACCTCGGCTGAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp ATAGGTACCACACCACCATCAGTACGCAGTAATAGAACCAGGAAAGAAAGCCCACTTCCACACAACCAGTaGGTCATCCTCGGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: IGTTPPSVRSNRTRKESPLPHNQ*VILGAA
Trigger: CGCCGCACCGAGGATGACTCACTGGTTGTGTGGAAG...TGGGCTTTCTTTCCTGGTTCTATTACTGCGTACTGATGGTGGTGTGGTACCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS-3UTR TCA 90 bp TCAGTGGCAGCAATGGTAAACTCATCACCGCAGGAGACCCTGATCACTTGCTTCCTCTCCTGCGTTTCCTaGGAAGAGGGCGATCTAGAA +
Preference number: 4 (lower is better)
Translates to: SVAAMVNSSPQETLITCFLSCVS*EEGDLE
Trigger: TTCTAGATCGCCCTCTTCTCAGGAAACGCAGGAGAG...GAAGCAAGTGATCAGGGTCTCCTGCGGTGATGAGTTTACCATTGCTGCCACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCACTCTCCTGCGTTTCCTaGGAAGAGGGCGATCTAGAA +
Preference number: 4 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPLSCVS*EEGDLE
Trigger: TTCTAGATCGCCCTCTTCTCAGGAAACGCAGGAGAG...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTTCACCACATGACACCTaGCGGATAGCTTTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASSPHDT*RIALPC
Trigger: GCAAGGCAAAGCTATCCGTCAGGTGTCATGTGGTGA...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCATCACCACATGACACCTaGCGGATAGCTTTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPSPHDT*RIALPC
Trigger: GCAAGGCAAAGCTATCCGTCAGGTGTCATGTGGTGA...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTGAAATCATCACCACATaGCACCTGACGGATAGCTTT +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSEIITT*HLTDSF
Trigger: AAAGCTATCCGTCAGGTGTCATGTGGTGATGATTTC...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTCTGCATTTTCCAGCTCCTTTCGAAGCCAGCCAGGACAGGAGCTGCTGGCCCCCCATCACAGCCACATTaGACTGCAACAATAATCAAG +
Preference number: 4 (lower is better)
Translates to: FCIFQLLSKPARTGAAGPPSQPH*TATIIK
Trigger: CTTGATTATTGTTGCAGTTCAATGTGGCTGTGATGG...GGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACATCAATAGCAGCTGTGTaGGTCTTGCCTGGGGCAATG +
Preference number: 4 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETSIAAV*VLPGAM
Trigger: CATTGCCCCAGGCAAGACTCACACAGCTGCTATTGA...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAACACCGCAGGAGACCCTaGTCACTTGCTTCCCACCAA +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKHRRRP*SLASHQ
Trigger: TTGGTGGGAAGCAAGTGATCAGGGTCTCCTGCGGTG...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTTCCACATGCTTTGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACTCGGTAAGTGTGCTGTaGAGTTCTTTGGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: FPHALAVDRRLCLHGPADSVSVL*SSLGPS
Trigger: ACTGGGACCCAAAGAACTTCACAGCACACTTACCGA...GTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCAAAGCATGTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCAGGTGGGATCAACAGATaGGGTACAGAGCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPGGINR*GTELLL
Trigger: CAACAGCAGCTCTGTACCTCATCTGTTGATCCCACC...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCCCAGCGCAATTAAGGTaGGCACTGTGTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTPAQLR*ALCLLF
Trigger: GAAGAGGAGACACAGTGCTCACCTTAATTGCGCTGG...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTGCTGCACAGAGTAACTaGACTTTTTCGAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSAAQSN*TFSKQA
Trigger: GGCTTGTTTCGAAAAAGTTCAGTTACTCTGTGCAGC...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CACATGCTTTGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACCATGATGGACTCAATTCTCTaGGACACCTCATCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: HMLWLSIGGFVSMAQLTMMDSIL*DTSSLR
Trigger: TCTGAGGGATGAGGTGTCTCAGAGAATTGAGTCCAT...CATGGTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCAAAGCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGCTCTTAAGGCTATTCTaGCTGCCCCATGGACTCAAT +
Preference number: 4 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQLLRLF*LPHGLN
Trigger: ATTGAGTCCATGGGGCAGTCAGAATAGCCTTAAGAG...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTCTTCTCCTTCATaGTTTTCTCTTAAGGCTATT +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHTSSPS*FSLKAI
Trigger: AATAGCCTTAAGAGAAAATCATGAAGGAGAAGAGGT...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATAGTGGTTGGGGCTGCTaGTATCAAGATCAGAACCCT +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHSGWGC*YQDQNP
Trigger: AGGGTTCTGATCTTGATATCAGCAGCCCCAACCACT...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCATGCTTTAAACTTCAGTaGAATGCTCAGCCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPCFKLQ*NAQPRE
Trigger: TTCTCTTGGCTGAGCATTTCACTGAAGTTTAAAGCA...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp ATAGGTACCACACCACCATCAGTACGCAGTAATAGAACCAGGAAAGAAAGCCCAGTGAGTCATCCTCGGTaGGGCGGTACAGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: IGTTPPSVRSNRTRKESPVSHPR*GGTAWL
Trigger: AAGCCACGCTGTACCGCCGCACCGAGGATGACTCAC...TGGGCTTTCTTTCCTGGTTCTATTACTGCGTACTGATGGTGGTGTGGTACCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS-3UTR GCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCATAATGTTGTCGTGCTaGAGCAGTGCCAGAATAACA +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPIMLSC*SSARIT
Trigger: TGTTATTCTGGCACTGCTGCAGCACGACAACATTAT...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TCAGCTGCATGGGTTCTAGCACTTCAGGGCCAGCAACTTTGTCCACCCCCATGCGCAATAATGTTGTCGTaGTGCAGCAGTGCCAGAATA +
Preference number: 4 (lower is better)
Translates to: SAAWVLALQGQQLCPPPCAIMLS*CSSARI
Trigger: TATTCTGGCACTGCTGCAGCACGACAACATTATTGC...GCATGGGGGTGGACAAAGTTGCTGGCCCTGAAGTGCTAGAACCCATGCAGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR GCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTAATGACGCAGCCAACTaGCCAGATATCAGACTTGAA +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSNDAAN*PDIRLE
Trigger: TTCAAGTCTGATATCTGGGCAGTTGGCTGCGTCATT...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp AAGTTCATCTGCAGTAGGTCTCTGCTCAGGATCCTGGTCAAGGCACGAATGAACAAAGTGGGTATTCCCTaGACAGACCTGCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: KFICSRSLLRILVKARMNKVGIP*TDLPGT
Trigger: AGTGCCCGGCAGGTCTGTGCAGGGAATACCCACTTT...GTTCATTCGTGCCTTGACCAGGATCCTGAGCAGAGACCTACTGCAGATGAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR GCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTAGTTTAGTGCCTCCTTaGATGTTCACCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSSLVPP*MFTQVY
Trigger: GTACACTTGGGTGAACATGCAAGGAGGCACTAAACT...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CTTTGTCCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACTCTCCACAGGAGACCTaGTCCACTGGATTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LCPPPCSHNNLIRRHRADSPQET*STGLLR
Trigger: CCTCAGCAATCCAGTGGAGCAGGTCTCCTGTGGAGA...GTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
CDS-3UTR GCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGGGCCATTACCACCATTaGCCCAGGCAAAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQGHYHH*PRQKCD
Trigger: ATCACATTTTTGCCTGGGGCAATGGTGGTAATGGCC...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCACTCTGTGGGGGTCATTaGCAGGCGGCCATTACCACC +
Preference number: 4 (lower is better)
Translates to: PREVVTWLCYARETKFSSLCGGH*QAAITT
Trigger: GGTGGTAATGGCCGCCTGGCAATGACCCCCACAGAG...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGTTCCATTCCTCGGTCTaGTTCCATTGTTCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQFHSSV*FHCSSE
Trigger: TTCCGAGGAACAATGGAAGCAGACCGAGGAATGGAA...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACTTCTTGTTCAACTTCTaGAGTTGGGTAAAAATCTGG +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHFLFNF*SWVKIW
Trigger: CCAGATTTTTACCCAACTGCAGAAGTTGAACAAGAA...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCTTCCATCTCTTCCTTTaGTGTCTGAGTTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPFHLFL*CLSSFG
Trigger: TCCAAAGGAACTCAGACAGCAAAGGAAGAGATGGAA...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTTCAGAGCCTCTGCCTTaGGCTCCTTTTCTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASSEPLP*APFLQV
Trigger: CACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGA...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCTGGCAAAATTTCCATTaGACAAGACCTCCCACAATG +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPWQNFH*TRPPTM
Trigger: CATTGTGGGAGGTCTTGTGCAATGGAAATTTTGCCA...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCAAAGCATCAGCCTTTATaGCACCAGTTTTGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPKHQPL*HQFWRN
Trigger: ATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTT...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACCAAGTCCCCAGAACTTaGAACTTTAATCAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHQVPRT*NFNQSL
Trigger: CAAACTTTGATTAAAGTTGCAAGTTCTGGGGACTTG...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTATTCACGCCATTCTTCTaGCCCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLFTPFF*PSLPSS
Trigger: GCTACTCGGGAGGCTGGGGCAGAAGAATGGCGTGAA...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR GCA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGAAATGTATGCAGATGTaGCGAGACAGTATTTCTTTT +
Preference number: 4 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGKCMQM*RDSISF
Trigger: AAAAGAAATACTGTCTCGGCACATCTGCATACATTT...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR GCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAACTATTGACCCTTCTCTaGCTCCCCGGTCCGGACTCA +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKLLTLL*LPGPDS
Trigger: TGAGTCCGGACCGGGGAGGCAGAGAAGGGTCAATAG...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS-3UTR CCA 90 bp CCCACAAGCGTCTCAGCCATGGAATACTCAGAATTAAGTTTCTTTGCTAGGCCAGGCCCAGGACGCGGATaGGGATGTAGTGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: PTSVSAMEYSELSFFARPGPGRG*GCSAVP
Trigger: AGGAACTGCACTACATCCCCATCCGCGTCCTGGGCC...TGGCCTAGCAAAGAAACTTAATTCTGAGTATTCCATGGCTGAGACGCTTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554258.1
CDS-3UTR CCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTGTGACCACAGCAAAGTaGGTATTCCCTGCACAGACC +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASVTTAK*VFPAQT
Trigger: GGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCAC...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCATCATGGTATGCTTCATaGTTGATAATTCCCGACATG +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPSWYAS*LIIPDM
Trigger: CATGTCGGGAATTATCAACCATGAAGCATACCATGA...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATTCGGAAGCCTCCACTTaGGTCAGGAGTTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHSEAST*VRSFRF
Trigger: GAATCTGAAACTCCTGACCCAAGTGGAGGCTTCCGA...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TGGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTGAAGCACAGCAGGACAGGAGCTGCTaGCCCCATTACTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: WMFYPQRLRSMHRLTEAQQDRSC*PHYCSP
Trigger: TGGGGAACAGTAATGGGGCCAGCAGCTCCTGTCCTG...CTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGACAAAGCCAGGGCCATaGGGGCCCTTCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQTKPGP*GPFHSP
Trigger: TGGAGAATGGAAGGGCCCCCATGGCCCTGGCTTTGT...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGTTTTACAAGGCTAGGTaGAAATACAAAGCTCACATC +
Preference number: 4 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMFYKAR*KYKAHI
Trigger: GATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACCATCCCCCTTTGAACTaGTTTCTGTTTGCATACTTG +
Preference number: 4 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHHPPLN*FLFAYL
Trigger: CAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATG...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGAGAAGTTGTAACTTaGCTGTGCTATGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQREVVT*LCYARE
Trigger: CTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCT...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp TGGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTGAAGCACAGGCAAACTCCGCCTCCTaGGTTCACGCCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: WMFYPQRLRSMHRLTEAQANSAS*VHAILL
Trigger: CAGGAGAATGGCGTGAACCCAGGAGGCGGAGTTTGC...CTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR CCA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCAAATTTATCTTGATCTaGTCTCTGGGAAGAGATAAG +
Preference number: 4 (lower is better)
Translates to: GTHPPPALTFTPPSQQPAKFILI*SLGRDK
Trigger: CTTATCTCTTCCCAGAGACCAGATCAAGATAAATTT...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR TCA 90 bp TCAACTTCCATGGCCCGAATTCCTTGCACGATCTTCACACACAGGTTAAGTGGGTCCCAAAGTCCGAGTTaGTGGAATCGCAGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: STSMARIPCTIFTHRLSGSQSPS*WNRSVA
Trigger: AGCGACACTGCGATTCCATCAACTCGGACTTTGGGA...CCCACTTAACCTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCATGGAAGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR TCA 90 bp AAGTTCATCTGCAGTAGGTCTCTGCTCAGGATCCTGGTCAAGGCACGAATGAACCTCTCCTGCGTTTCCTaGGAAGAGGGCGATCTAGAA +
Preference number: 4 (lower is better)
Translates to: KFICSRSLLRILVKARMNLSCVS*EEGDLE
Trigger: TTCTAGATCGCCCTCTTCTCAGGAAACGCAGGAGAG...GTTCATTCGTGCCTTGACCAGGATCCTGAGCAGAGACCTACTGCAGATGAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR TCA 90 bp TTTCCACATGCTTTGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACGACTTCACTGGTTCGTaGTGTTACTACAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: FPHALAVDRRLCLHGPADDFTGS*CYYSNG
Trigger: CCCATTGCTGTAGTAACATCACGAACCAGTGAAGTC...GTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCAAAGCATGTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
CDS-3UTR TCA 90 bp TTTCCACATGCTTTGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACGACAGGTCCGGGACATaGTGCAGAGATCCAAAAATA +
Preference number: 4 (lower is better)
Translates to: FPHALAVDRRLCLHGPADDRSGT*CRDPKI
Trigger: TATTTTTGGATCTCTGCATCATGTCCCGGACCTGTC...GTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCAAAGCATGTGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGACAGGTCCGGGACATaGTGCAGAGATCCAAAAATA +
Preference number: 4 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALDRSGT*CRDPKI
Trigger: TATTTTTGGATCTCTGCATCATGTCCCGGACCTGTC...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGTTTCAGATTCCTGCTaGCTGTCCTCTTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALVSDSC*LSSSSP
Trigger: TGGTGAAGAAGAGGACAGTCAGCAGGAATCTGAAAC...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGCTGAAAACGCTGCACTaGGAGGAGATGGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQLKTLH*EEMGCQ
Trigger: CTGACAGCCCATCTCCTCTCAGTGCAGCGTTTTCAG...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCATCGGTAAGTGTGCTGTaGAGTTCTTTGGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPSVSVL*SSLGPS
Trigger: ACTGGGACCCAAAGAACTTCACAGCACACTTACCGA...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCTGGGCGGGCCACACCTaGTTCCAGCCCACTCCAACT +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCWAGHT*FQPTPT
Trigger: AGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCA...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCAAGTGGTTGGGGCTGCTaGTATCAAGATCAGAACCCT +
Preference number: 4 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPSGWGC*YQDQNP
Trigger: AGGGTTCTGATCTTGATATCAGCAGCCCCAACCACT...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTGTTGCATTTACATGCTaGACCAAAACCCACTGTTAC +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSVAFTC*TKTHCY
Trigger: GTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAAC...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGGGAAAGGCTCCCCTATaGACAAGACCAGGGCACTCA +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQGKAPL*TRPGHS
Trigger: TGAGTGCCCTGGTCTTGTTCATAGGGGAGCCTTTCC...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGTACTCCATCCCCCTTTaGACTGGTTTCTGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGYSIPL*TGFCLH
Trigger: ATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTA...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCGTGGTAACAGAGATGTaGCATAGTGGAGTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISVVTEM*HSGVFL
Trigger: GAGAAAAACTCCACTATGTCACATCTCTGTTACCAC...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR TCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCAATATGGAACATCTCTTaGAAAACTGGAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPIWNIS*KTGSSG
Trigger: TCCAGAACTTCCAGTTTTTCAAGAGATGTTCCATAT...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR TCA 90 bp TTCTGCATTTTCCAGCTCCTTTCGAAGCCAGCCAGGACAGGAGCTGCTGGCCCCAGATGCATACAACTTTaGAGTCAGGTTGTATACCTG +
Preference number: 4 (lower is better)
Translates to: FCIFQLLSKPARTGAAGPRCIQL*SQVVYL
Trigger: CAGGTATACAACCTGACTTCAAAGTTGTATGCATCT...GGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAGGAAGGCCTGCAAAGTaGGGCCTCGGGCTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKGRPAK*GLGLGL
Trigger: CAACCCTAGCCCGAGGCCTCACTTTGCAGGCCTTCC...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS-3UTR GCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGGTCGTGCTGCAGCAGTaGCAGAATAACAATCTCATT +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGVVLQQ*QNNNLI
Trigger: AATGAGATTGTTATTCTGGCACTGCTGCAGCACGAC...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCATAATGTTGTCGTGCTaGAGCAGTGCCAGAATAACA +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISIMLSC*SSARIT
Trigger: TGTTATTCTGGCACTGCTGCAGCACGACAACATTAT...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CACCCAAGTGTACAGTTCCTTCTCCACTGTGACCACAGCAAAGTGGGTATTCCCATGGCCCGAATTCCTTaGACGATCTTCACACACAGG +
Preference number: 4 (lower is better)
Translates to: HPSVQFLLHCDHSKVGIPMARIP*TIFTHR
Trigger: CCTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCAT...GGGAATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAACTGTACACTTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR GCA 90 bp CGCATGGCACAAATTGGGTGGGGTTTAGAATCAGATGCTCCTCCAGATGGGAATTCTGCAGTAGGTCTCTaGTCAGGATCCTGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: RMAQIGWGLESDAPPDGNSAVGL*SGSWSR
Trigger: CCTTGACCAGGATCCTGAGCAGAGACCTACTGCAGA...ATTCCCATCTGGAGGAGCATCTGATTCTAAACCCCACCCAATTTGTGCCATGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR GCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACTGGTCTCTTTGTAGGTaGATTAAGCAGAGTGACTTT +
Preference number: 4 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHWSLCR*IKQSDF
Trigger: AAAGTCACTCTGCTTAATGCACCTACAAAGAGACCA...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAATCTCCACAGGAGACCTaGTCCACTGGATTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKSPQET*STGLLR
Trigger: CCTCAGCAATCCAGTGGAGCAGGTCTCCTGTGGAGA...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCATTACCACCATTaGCCCAGGCAAAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALGHYHH*PRQKCD
Trigger: ATCACATTTTTGCCTGGGGCAATGGTGGTAATGGCC...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTCATGGGGATAAATTCTaGATTTTCCAGCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSHGDKF*IFQLLS
Trigger: CGAAAGGAGCTGGAAAATGCAGAATTTATCCCCATG...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATTTTAACACCAGACCCTaGAATCTCTCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHFNTRP*NLSTST
Trigger: GGTGGAGGTTGAGAGATTGCAGGGTCTGGTGTTAAA...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTTGCATCCCCACCTGCTaGCCTCCTTCTAATTTCTTG +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASCIPTC*PPSNFL
Trigger: CAAGAAATTAGAAGGAGGGCAGCAGGTGGGGATGCA...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCGAATGCATCCCCACCTaGTGCCCTCCTTCTAATTTC +
Preference number: 4 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTECIPT*CPPSNF
Trigger: GAAATTAGAAGGAGGGCAGCAGGTGGGGATGCATTC...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCTTCCATCTCTTCCTTTaGTGTCTGAGTTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISFHLFL*CLSSFG
Trigger: TCCAAAGGAACTCAGACAGCAAAGGAAGAGATGGAA...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCACTATCTAAAAGGCAATaGCACTCTCCAAATGTACAA +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPLSKRQ*HSPNVQ
Trigger: TTGTACATTTGGAGAGTGGCATTGCCTTTTAGATAG...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCTGGCAAAATTTCCATTaGACAAGACCTCCCACAATG +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISWQNFH*TRPPTM
Trigger: CATTGTGGGAGGTCTTGTGCAATGGAAATTTTGCCA...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CGCATGGCACAAATTGGGTGGGGTTTAGAATCAGATGCTCCTCCAGATGGGAATACCTTCTCAGCAACCTaGCCATGTCCATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RMAQIGWGLESDAPPDGNTFSAT*PCPSAP
Trigger: TGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGGT...ATTCCCATCTGGAGGAGCATCTGATTCTAAACCCCACCCAATTTGTGCCATGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR GCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATAACTTGGCTGTGCTATaGCAGGGAGACCAAATTCAG +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHNLAVL*QGDQIQ
Trigger: CTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTT...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGTTGTAACTTGGCTGTaGTATGCCAGGGAGACCAAA +
Preference number: 4 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALVVTWL*YARETK
Trigger: TTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAAC...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGGATTATAGCCCACTCTaGCCTGACCATCATGAATAC +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGDYSPL*PDHHEY
Trigger: GTATTCATGATGGTCAGGGCAGAGTGGGCTATAATC...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp TGCCCAGATATCAGACTTGAAATTGTACTTTACTCCTTGACAGAGCTCTGGAGAAGGTTCCCTCCTCGGTaGGGCGGTACAGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: CPDIRLEIVLYSLTELWRRFPPR*GGTAWL
Trigger: AAGCCACGCTGTACCGCCGCACCGAGGAGGGAACCT...TCTCCAGAGCTCTGTCAAGGAGTAAAGTACAATTTCAAGTCTGATATCTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554258.1
CDS-3UTR GCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGCTGAGGCAGGAGAATTaGTTGAATCCGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQLRQEN*LNPGGG
Trigger: TCCGCCTCCCGGATTCAAGCAATTCTCCTGCCTCAG...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CCA 90 bp GGATTCCAGCTTTATGGATGCAGCTCACTGCTGAAACAATCTGAAATAGGTACCGGCCCAGGACGCGGATaGGGATGTAGTGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: GFQLYGCSSLLKQSEIGTGPGRG*GCSAVP
Trigger: AGGAACTGCACTACATCCCCATCCGCGTCCTGGGCC...GGTACCTATTTCAGATTGTTTCAGCAGTGAGCTGCATCCATAAAGCTGGAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS-3UTR CCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACTGCGGCGGTACAGCGTaGCTTCCCCGAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: NKITPRSYLKGNATLQMYCGGTA*LPRRRR
Trigger: GCGGCGCCTTCGGGGAAGCCACGCTGTACCGCCGCA...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678037.1
CDS-3UTR CCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTCACACACAGGTTAAGTaGGTTTGTAGCATCAAACGT +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSHTQVK*VCSIKR
Trigger: ACGTTTGATGCTACAAACCCACTTAACCTGTGTGTG...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGTCTTGCCTGGGGCAATaGTACGGATCTTATAAAAGG +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGSCLGQ*YGSYKR
Trigger: CCTTTTATAAGATCCGTACCATTGCCCCAGGCAAGA...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGTCTTGCCTGGGGCAATaGTACGGATCTTATAAAAGG +
Preference number: 4 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQSCLGQ*YGSYKR
Trigger: CCTTTTATAAGATCCGTACCATTGCCCCAGGCAAGA...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTTGTGTGAGTCTTGCCTaGGGCAATGGTACGGATCTT +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASCVSLA*GNGTDL
Trigger: AAGATCCGTACCATTGCCCCAGGCAAGACTCACACA...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACAGATATCAGAGCCATGTaGTCTCTCTGTGGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETDIRAM*SLCGGH
Trigger: ATGACCCCCACAGAGAGACCACATGGCTCTGATATC...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCAGATATCAGAGCCATGTaGTCTCTCTGTGGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPDIRAM*SLCGGH
Trigger: ATGACCCCCACAGAGAGACCACATGGCTCTGATATC...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACCCTCATTCGGAAGCCTCCACTTaGGTCAGGAGTTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: PPPCSHNNLIRRHRADPHSEAST*VRSFRF
Trigger: GAATCTGAAACTCCTGACCCAAGTGGAGGCTTCCGA...ATGAGGGTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTAGTTGGGTAAAAATCTaGAGGTTTTCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTSWVKI*RFSCCS
Trigger: GCTACAGCAAGAAAACCTCCAGATTTTTACCCAACT...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACAGTTGGGTAAAAATCTaGAGGTTTTCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHSWVKI*RFSCCS
Trigger: GCTACAGCAAGAAAACCTCCAGATTTTTACCCAACT...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAATGCTGTGAAGTTCTTTaGGTCCCAGTCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKCCEVL*VPVSWG
Trigger: CCCCCAGGAGACTGGGACCCAAAGAACTTCACAGCA...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AAACTCATCACCGCAGGAGACCCTGATCACTTGCTTCCCACCAAGGGGTCCCCCGGTGAAAATGATACATaGGATATAAGCTGCTACCAG +
Preference number: 4 (lower is better)
Translates to: KLITAGDPDHLLPTKGSPGENDT*DISCYQ
Trigger: CTGGTAGCAGCTTATATCCCATGTATCATTTTCACC...GGGGGACCCCTTGGTGGGAAGCAAGTGATCAGGGTCTCCTGCGGTGATGAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CCA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGTGAAAATGATACATaGGATATAAGCTGCTACCAG +
Preference number: 4 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTGENDT*DISCYQ
Trigger: CTGGTAGCAGCTTATATCCCATGTATCATTTTCACC...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATTCAGACATATTTTCCTaGACTCAGGGCTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHSDIFS*TQGSQE
Trigger: CTCTTGGGAGCCCTGAGTCCAGGAAAATATGTCTGA...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCAAATCCCACCCTGCATTaGTCACAGCCTGAAACACCA +
Preference number: 4 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPNPTLH*SQPETP
Trigger: TGGTGTTTCAGGCTGTGACCAATGCAGGGTGGGATT...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCATTCAGAAAGAAAGTaGTTGGGGCTGCTGATATCA +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISHSERK*LGLLIS
Trigger: TGATATCAGCAGCCCCAACCACTTTCTTTCTGAATG...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACAGTTTGGTGCTGGCTTTaGGCCACTCAGGTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETVWCWL*ATQVGK
Trigger: TTTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAAC...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCACCAGTTTTGGAGAAATaGCAAAATTTCCATTGCACA +
Preference number: 4 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPPVLEK*QNFHCT
Trigger: TGTGCAATGGAAATTTTGCCATTTCTCCAAAACTGG...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCAGCCTGTCCCGAGCAATaGGGTTCTCCCCAAGCATCA +
Preference number: 4 (lower is better)
Translates to: PREVVTWLCYARETKFSSACPEQ*GSPQAS
Trigger: TGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGC...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGCGGAGGCTTAGAATCTaGATGTTTTATCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQRRLRI*MFYPQR
Trigger: TCTCTGGGGATAAAACATCCAGATTCTAAGCCTCCG...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATGGCTTCCCAAAGTGCTaGGATTGTAGACATGAACCA +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHGFPKC*DCRHEP
Trigger: TGGTTCATGTCTACAATCCCAGCACTTTGGGAAGCC...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp ATAGCATGTACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACTTCCACACAACCAGTaGGTCATCCTCGGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: IACTLCGWLLFLHTMPMRLPHNQ*VILGAA
Trigger: CGCCGCACCGAGGATGACTCACTGGTTGTGTGGAAG...TCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCGTCTTTATATCTCTATaGAGGATTCCAGCTTTATGG +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPVFISL*RIPALW
Trigger: CCATAAAGCTGGAATCCTTCATAGAGATATAAAGAC...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGTGGTCAAGGCACGAATaGACCATTTGGATCAATTCC +
Preference number: 4 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALWSRHE*TIWINS
Trigger: GGAATTGATCCAAATGGTTCATTCGTGCCTTGACCA...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAACTCTCCTGCGTTTCCTaGGAAGAGGGCGATCTAGAA +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKLSCVS*EEGDLE
Trigger: TTCTAGATCGCCCTCTTCTCAGGAAACGCAGGAGAG...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCAGACTTCACTGGTTCGTaGTGTTACTACAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPDFTGS*CYYSNG
Trigger: CCCATTGCTGTAGTAACATCACGAACCAGTGAAGTC...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CTTTGTCCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACGTTCCTTCTCCACTGTaGCCACAGCAAAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LCPPPCSHNNLIRRHRADVPSPL*PQQSGY
Trigger: ATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAAC...GTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
CDS-3UTR TCA 90 bp CAGCAACTTTGTCCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGGCCAGCACTTTGCCTaGCTGGGTCAACAGAAATGT +
Preference number: 4 (lower is better)
Translates to: QQLCPPPCSHNNLIRRHRGQHFA*LGQQKC
Trigger: ACATTTCTGTTGACCCAGTCAGGCAAAGTGCTGGCC...TCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAGTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAGGCCAGCACTTTGCCTaGCTGGGTCAACAGAAATGT +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKGQHFA*LGQQKC
Trigger: ACATTTCTGTTGACCCAGTCAGGCAAAGTGCTGGCC...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCATTCCCGACATGCACTaGTTCAGACCCAGCTTATTG +
Preference number: 4 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTIPDMH*FRPSLL
Trigger: CAATAAGCTGGGTCTGAATCAGTGCATGTCGGGAAT...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGCCCGGGCTAGAGCTCTaGAACACAGTTCCAATGGAT +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQPGLEL*NTVPMD
Trigger: ATCCATTGGAACTGTGTTTCAGAGCTCTAGCCCGGG...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGATCTTTCTCAGATTCTaGAAACGCTGCACTGAGAGG +
Preference number: 4 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALIFLRF*KRCTER
Trigger: CCTCTCAGTGCAGCGTTTTCAGAATCTGAGAAAGAT...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAGCATTGGTCACAGCCTaGAACACCAGCTGTGTGATG +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKALVTA*NTSCVM
Trigger: CATCACACAGCTGGTGTTTCAGGCTGTGACCAATGC...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAGCCTGGCCAGTGTGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLAWPVW*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCACACTGGCCAGGC...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp AGTAGGTCTCTGCTCAGGATCCTGGTCAAGGCACGAATGAACCATTTGGATCAAGACTGCAGTGAGCTATaGTCACGACACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: SRSLLRILVKARMNHLDQDCSEL*SRHCTP
Trigger: TGGAGTGCAGTGTCGTGATCATAGCTCACTGCAGTC...TTGATCCAAATGGTTCATTCGTGCCTTGACCAGGATCCTGAGCAGAGACCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR GCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAGTGAGTCATCCTCGGTaGGGCGGTACAGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKVSHPR*GGTAWL
Trigger: AAGCCACGCTGTACCGCCGCACCGAGGATGACTCAC...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678037.1
CDS-3UTR GCA 90 bp TTTCCACATGCTTTGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACGTCGTGCTGCAGCAGTaGCAGAATAACAATCTCATT +
Preference number: 4 (lower is better)
Translates to: FPHALAVDRRLCLHGPADVVLQQ*QNNNLI
Trigger: AATGAGATTGTTATTCTGGCACTGCTGCAGCACGAC...GTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCAAAGCATGTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR GCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGTTCCAGCTTTATGGATaGAGCTCACTGCTGAAACAA +
Preference number: 4 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQFQLYG*SSLLKQ
Trigger: TTGTTTCAGCAGTGAGCTGCATCCATAAAGCTGGAA...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CAGCAACTTTGTCCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGATCTGCAGTAGGTCTCTaGTCAGGATCCTGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: QQLCPPPCSHNNLIRRHRSAVGL*SGSWSR
Trigger: CCTTGACCAGGATCCTGAGCAGAGACCTACTGCAGA...TCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAGTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR GCA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCAGTGCTTCAGTCACAGTaGTTGACCTTGGTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPVLQSQ*LTLVSL
Trigger: CAAAGAGACCAAGGTCAAGCACTGTGACTGAAGCAC...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTTCCCTGCACAGACCTaGCGGGCACTACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: ASSFTPSPFELVSVCILVFPAQT*RALQPL
Trigger: GAGTGGCTGTAGTGCCCGGCAGGTCTGTGCAGGGAA...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCGGATAGCTTTGCCTTaGAACTTTTCCACATGCTTT +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGRIALP*NFSTCF
Trigger: AAAGCATGTGGAAAAGTTGCAAGGCAAAGCTATCCG...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCGGGAACTTCATGGTATaGTTCATGGTTGATAATTCC +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISGNFMV*FMVDNS
Trigger: GGAATTATCAACCATGAAGCATACCATGAAGTTCCC...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATCAATGGATAAGCCACTaGTATTGGAACGGATGGTCT +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHQWISH*YWNGWS
Trigger: AGACCATCCGTTCCAATAGCAGTGGCTTATCCATTG...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTTTTAACACCAGACCCTaGAATCTCTCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASFNTRP*NLSTST
Trigger: GGTGGAGGTTGAGAGATTGCAGGGTCTGGTGTTAAA...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCTTCTTGTTCAACTTCTaGAGTTGGGTAAAAATCTGG +
Preference number: 4 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPFLFNF*SWVKIW
Trigger: CCAGATTTTTACCCAACTGCAGAAGTTGAACAAGAA...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACACAAAGCCAGGAAAGCTaGTCTCTGCATTCGGTAAGT +
Preference number: 4 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETQSQES*SLHSVS
Trigger: ACTTACCGAATGCAGAGAGCAGCTTTCCTGGCTTTG...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATAATGTACAAGGAAAGTaGTTCAGAGCCTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHNVQGK*FRASAL
Trigger: CAAGGCAGAGGCTCTGAAGCACTTTCCTTGTACATT...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCAAGCATCAGCCTTTATaGCACCAGTTTTGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISKHQPL*HQFWRN
Trigger: ATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTT...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACCAAAGAATATTTCTGTaGAGATGTCCCTTGCATTGT +
Preference number: 4 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHQRIFL*RCPLHC
Trigger: ACAATGCAAGGGACATCTGCACAGAAATATTCTTTG...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCGTTGTAACTTGGCTGTaGTATGCCAGGGAGACCAAA +
Preference number: 4 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTVVTWL*YARETK
Trigger: TTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAAC...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAGGGACTACAGGCACCTaGCACAACACCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLGTTGT*HNTQLI
Trigger: AATTAGCTGGGTGTTGTGGCAGGTGCCTGTAGTCCC...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR GCA 90 bp GTCTCCATGGCCCAGCTGACCATGGAGTTTAGTGCCTCCTTGCATGTTCACCCATTCTCATTTAGGGGCTaGATGATGGGTTTAGATGCA +
Preference number: 4 (lower is better)
Translates to: VSMAQLTMEFSASLHVHPFSFRG*MMGLDA
Trigger: TGCATCTAAACCCATCATGCAGCCCCTAAATGAGAA...TGGGTGAACATGCAAGGAGGCACTAAACTCCATGGTCAGCTGGGCCATGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATTCCTTGACAGAGCTCTaGAGACATGTAATATGGGGT +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHSLTEL*RHVIWG
Trigger: ACCCCATATTACATGTCTCCAGAGCTCTGTCAAGGA...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCCATGTGGTCTCTCTGTaGGGGTCATTGCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCHVVSL*GSLPGG
Trigger: GCCGCCTGGCAATGACCCCCACAGAGAGACCACATG...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGCAGGAGACTAGAGGCTaGGTCTACAGGAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQQETRG*VYRSLF
Trigger: GAACAGACTCCTGTAGACCCAGCCTCTAGTCTCCTG...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTGAGCTGCTGTTGCTATaGCAGTCACTGATGACAAAG +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASELLLL*QSLMTK
Trigger: CTTTGTCATCAGTGACTGCCATAGCAACAGCAGCTC...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCAGAGAAGTTGTAACTTaGCTGTGCTATGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTREVVT*LCYARE
Trigger: CTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCT...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
3UTR CAA 72 bp GTACTGGCTAGAGTCAACTTCCATGGCCCGAATTCCTaGCACGATCTTCACACACAGGTTAAGTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: VLARVNFHGPNS*HDLHTQVKWVL
Trigger: CAGAACCCACTTAACCTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCATGGAAGTTGACTCTAGCCAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR CAA 72 bp GTGTTCCAAAGGAGCTTCAGAGGCCACTTTGAGTCCTaGCAGCTCTTCATAGGGCAGGGTATCTTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: VFQRSFRGHFES*QLFIGQGIFLR
Trigger: TCTGAGAAAGATACCCTGCCCTATGAAGAGCTGCAAGGACTCAAAGTGGCCTCTGAAGCTCCTTTGGAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp GTACGCAGTAATAGAACCAGGAAAGAAAGCCCACAGAGAATCATGATGTGGAGGTCCCAAAGTCCGAGTTaGTGGAATCGCAGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: VRSNRTRKESPQRIMMWRSQSPS*WNRSVA
Trigger: AGCGACACTGCGATTCCATCAACTCGGACTTTGGGA...CCTCCACATCATGATTCTCTGTGGGCTTTCTTTCCTGGTTCTATTACTGCGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS-3UTR TCA 90 bp CCCACAAGCGTCTCAGCCATGGAATACTCAGAATTAAGTTTCTTTGCTAGGCCATCCCAAAGTCCGAGTTaGTGGAATCGCAGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: PTSVSAMEYSELSFFARPSQSPS*WNRSVA
Trigger: AGCGACACTGCGATTCCATCAACTCGGACTTTGGGA...TGGCCTAGCAAAGAAACTTAATTCTGAGTATTCCATGGCTGAGACGCTTGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554258.1
CDS-3UTR TCA 90 bp CCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACCCTCATTGGTCAAGGCACGAATaGACCATTTGGATCAATTCC +
Preference number: 4 (lower is better)
Translates to: PPPCSHNNLIRRHRADPHWSRHE*TIWINS
Trigger: GGAATTGATCCAAATGGTTCATTCGTGCCTTGACCA...ATGAGGGTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR TCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACATGGTCAAGGCACGAATaGACCATTTGGATCAATTCC +
Preference number: 4 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETWSRHE*TIWINS
Trigger: GGAATTGATCCAAATGGTTCATTCGTGCCTTGACCA...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACCCTCATGAAATCATCACCACATaGCACCTGACGGATAGCTTT +
Preference number: 4 (lower is better)
Translates to: PPPCSHNNLIRRHRADPHEIITT*HLTDSF
Trigger: AAAGCTATCCGTCAGGTGTCATGTGGTGATGATTTC...ATGAGGGTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
CDS-3UTR TCA 90 bp CACCCAAGTGTACAGTTCCTTCTCCACTGTGACCACAGCAAAGTGGGTATTCCCCAGTCACACAGACAGTaGAATCATCACCACATGACA +
Preference number: 4 (lower is better)
Translates to: HPSVQFLLHCDHSKVGIPQSHRQ*NHHHMT
Trigger: TGTCATGTGGTGATGATTTCACTGTCTGTGTGACTG...GGGAATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAACTGTACACTTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR TCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTCAGTCACACAGACAGTaGAATCATCACCACATGACA +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASQSHRQ*NHHHMT
Trigger: TGTCATGTGGTGATGATTTCACTGTCTGTGTGACTG...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCAGCTCCACTGGATTGCTaGGGAAGAAGTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PREVVTWLCYARETKFSSAPLDC*GRSSAA
Trigger: TGCAGCTGAACTTCTTCCTCAGCAATCCAGTGGAGC...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATATAATAATCCTCTTCTaGATCCAAACCCAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHIIILF*IQTQSS
Trigger: GGACGACTGGGTTTGGATTCAGAAGAGGATTATTAT...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACAGCTGCACAGAGTAACTaGACTTTTTCGAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETAAQSN*TFSKQA
Trigger: GGCTTGTTTCGAAAAAGTTCAGTTACTCTGTGCAGC...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTACCTCTTCTCCTTCATaGTTTTCTCTTAAGGCTATT +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSTSSPS*FSLKAI
Trigger: AATAGCCTTAAGAGAAAATCATGAAGGAGAAGAGGT...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCACCTCTTCTCCTTCATaGTTTTCTCTTAAGGCTATT +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISTSSPS*FSLKAI
Trigger: AATAGCCTTAAGAGAAAATCATGAAGGAGAAGAGGT...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCGCTGGATGTTAGTAAGGTCATAGATCCGGGCCCTCCAGAGAGAACAAATTGTAGTGGTTGGGGCTGCTaGTATCAAGATCAGAACCCT +
Preference number: 4 (lower is better)
Translates to: SLDVSKVIDPGPPERTNCSGWGC*YQDQNP
Trigger: AGGGTTCTGATCTTGATATCAGCAGCCCCAACCACT...ACAATTTGTTCTCTCTGGAGGGCCCGGATCTATGACCTTACTAACATCCAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR TCA 90 bp TGGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTGAAGCACAGAGTGGTTGGGGCTGCTaGTATCAAGATCAGAACCCT +
Preference number: 4 (lower is better)
Translates to: WMFYPQRLRSMHRLTEAQSGWGC*YQDQNP
Trigger: AGGGTTCTGATCTTGATATCAGCAGCCCCAACCACT...CTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAACAAAGAAGATCCCATTaGACAGAGTTGCCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKQRRSH*TELPVP
Trigger: CGGGACAGGCAACTCTGTTCAATGGGATCTTCTTTG...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp ATTCCTTTTGCAAGTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTCACTGTTACAGTTTATaGCAACCCCCGCAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: IPFASSTCSVRLQGLPGFHCYSL*QPPQVP
Trigger: GGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTG...AAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCAGAGGATACAGGGACATaGCAGGTCAATCGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PREVVTWLCYARETKFSSEDTGT*QVNRSS
Trigger: TGAGGACCGATTGACCTGTCATGTCCCTGTATCCTC...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCGATGAACACCCAAACTaGCCCAGCCTCTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPDEHPN*PSLSGL
Trigger: CAGGCCTGAGAGGCTGGGTCAGTTTGGGTGTTCATC...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAGATGAACACCCAAACTaGCCCAGCCTCTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKDEHPN*PSLSGL
Trigger: CAGGCCTGAGAGGCTGGGTCAGTTTGGGTGTTCATC...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TTTCCACATGCTTTGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACATAATGTTGTCGTGCTaGAGCAGTGCCAGAATAACA +
Preference number: 4 (lower is better)
Translates to: FPHALAVDRRLCLHGPADIMLSC*SSARIT
Trigger: TGTTATTCTGGCACTGCTGCAGCACGACAACATTAT...GTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCAAAGCATGTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR GCA 90 bp TTTCCACATGCTTTGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACTTCCAGCTTTATGGATaGAGCTCACTGCTGAAACAA +
Preference number: 4 (lower is better)
Translates to: FPHALAVDRRLCLHGPADFQLYG*SSLLKQ
Trigger: TTGTTTCAGCAGTGAGCTGCATCCATAAAGCTGGAA...GTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCAAAGCATGTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR GCA 90 bp ATTCCTTTTGCAAGTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTTCTGCAGTAGGTCTCTaGTCAGGATCCTGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: IPFASSTCSVRLQGLPGFSAVGL*SGSWSR
Trigger: CCTTGACCAGGATCCTGAGCAGAGACCTACTGCAGA...AAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CAAGATATAGACCATTCCCATTACTCTAGGATCCCTTCCACCTCTTCTGTTAATTTCCCTGCACAGACCTaGCGGGCACTACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: QDIDHSHYSRIPSTSSVNFPAQT*RALQPL
Trigger: GAGTGGCTGTAGTGCCCGGCAGGTCTGTGCAGGGAA...ATTAACAGAAGAGGTGGAAGGGATCCTAGAGTAATGGGAATGGTCTATATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR GCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTTTCCCTGCACAGACCTaGCGGGCACTACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGFPAQT*RALQPL
Trigger: GAGTGGCTGTAGTGCCCGGCAGGTCTGTGCAGGGAA...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTTCCCAACGCCCAGCTaGCCACACTTGTTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ASSFTPSPFELVSVCILVFPTPS*PHLLQP
Trigger: TGGCTGCAACAAGTGTGGGCAGCTGGGCGTTGGGAA...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAACGATGAGAATGGTATaGCATCCACGGCAAGACAGG +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKTMRMV*HPRQDR
Trigger: CCTGTCTTGCCGTGGATGGCATACCATTCTCATCGT...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACACAATGGATAAGCCACTaGTATTGGAACGGATGGTCT +
Preference number: 4 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETQWISH*YWNGWS
Trigger: AGACCATCCGTTCCAATAGCAGTGGCTTATCCATTG...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTAGCCAGGACAGGAGCTaGTGGCCCCATTACTGTTCC +
Preference number: 4 (lower is better)
Translates to: ASSFTPSPFELVSVCILVSQDRS*WPHYCS
Trigger: GGAACAGTAATGGGGCCAGCAGCTCCTGTCCTGGCT...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGTTCCATCTCTTCCTTTaGTGTCTGAGTTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALFHLFL*CLSSFG
Trigger: TCCAAAGGAACTCAGACAGCAAAGGAAGAGATGGAA...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTCTATCTAAAAGGCAATaGCACTCTCCAAATGTACAA +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSLSKRQ*HSPNVQ
Trigger: TTGTACATTTGGAGAGTGGCATTGCCTTTTAGATAG...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TGGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTGAAGCACAGGATGAGGTACAGAGCTaGTGTTGCTATGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: WMFYPQRLRSMHRLTEAQDEVQS*CCYGSH
Trigger: GTGACTGCCATAGCAACAGCAGCTCTGTACCTCATC...CTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCACTACTTCACCACTCTaGAGAGGACACTGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPTTSPL*RGHWAG
Trigger: GCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGT...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTACTCCCAGGGTTTGGTaGTGGCTTTGGGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: ASSFTPSPFELVSVCILVTPRVW*WLWATQ
Trigger: CTGAGTGGCCCAAAGCCAGCACCAAACCCTGGGAGT...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATTGGCAAAATTTCCATTaGACAAGACCTCCCACAATG +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHWQNFH*TRPPTM
Trigger: CATTGTGGGAGGTCTTGTGCAATGGAAATTTTGCCA...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTCAAGTCCCCAGAACTTaGAACTTTAATCAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSQVPRT*NFNQSL
Trigger: CAAACTTTGATTAAAGTTGCAAGTTCTGGGGACTTG...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGGAACTGGTTTCTGTTTaGATACTTGTTTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGELVSV*ILVWWE
Trigger: TTCCCACCAAACAAGTATGCAAACAGAAACCAGTTC...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CAAGATATAGACCATTCCCATTACTCTAGGATCCCTTCCACCTCTTCTGTTAATGGCCCAGGACGCGGATaGGGATGTAGTGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: QDIDHSHYSRIPSTSSVNGPGRG*GCSAVP
Trigger: AGGAACTGCACTACATCCCCATCCGCGTCCTGGGCC...ATTAACAGAAGAGGTGGAAGGGATCCTAGAGTAATGGGAATGGTCTATATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCAAACATAGACTTCACTaGTTCGTGATGTTACTACAG +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISKHRLH*FVMLLQ
Trigger: CTGTAGTAACATCACGAACCAGTGAAGTCTATGTTT...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CACCCAAGTGTACAGTTCCTTCTCCACTGTGACCACAGCAAAGTGGGTATTCCCATAACATCCAGTTTCTaGGGGGTGGATTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: HPSVQFLLHCDHSKVGIPITSSF*GVDFPP
Trigger: TGGTGGAAAATCCACCCCCCAGAAACTGGATGTTAT...GGGAATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAACTGTACACTTGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCATAACATCCAGTTTCTaGGGGGTGGATTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTITSSF*GVDFPP
Trigger: TGGTGGAAAATCCACCCCCCAGAAACTGGATGTTAT...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGAAACACAGTTCCAATaGATAAGCCACTGCTATTGG +
Preference number: 4 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALETQFQ*ISHCYW
Trigger: CCAATAGCAGTGGCTTATCCATTGGAACTGTGTTTC...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AGAATTCAATACTTTCTCAACGATGAGAATGGTATGCCATCCACGGCAAGACAGCAGGACAGGAGCTGCTaGCCCCATTACTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: RIQYFLNDENGMPSTARQQDRSC*PHYCSP
Trigger: TGGGGAACAGTAATGGGGCCAGCAGCTCCTGTCCTG...CTGTCTTGCCGTGGATGGCATACCATTCTCATCGTTGAGAAAGTATTGAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAACAGGACAGGAGCTGCTaGCCCCATTACTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKQDRSC*PHYCSP
Trigger: TGGGGAACAGTAATGGGGCCAGCAGCTCCTGTCCTG...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GCATACAACTTTGAAGTCAGGTTGTATACCTGTGAAGAAGTGGACAGAGACAAGCGCAGGAGGAGTCAGTaGTGTTCCCTTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: AYNFEVRLYTCEEVDRDKRRRSQ*CSLPST
Trigger: TGTGCTGGGAAGGGAACACCACTGACTCCTCCTGCG...CTTGTCTCTGTCCACTTCTTCACAGGTATACAACCTGACTTCAAAGTTGTATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGCTGTCTGAGTTCCTTTaGAATGCATCCCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQLSEFL*NASPPA
Trigger: AGCAGGTGGGGATGCATTCCAAAGGAACTCAGACAG...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGAATCCCACCCTGCATTaGTCACAGCCTGAAACACCA +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQNPTLH*SQPETP
Trigger: TGGTGTTTCAGGCTGTGACCAATGCAGGGTGGGATT...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCAGCTGCATGGGTTCTAGCACTTCAGGGCCAGCAACTTTGTCCACCCCCATGCCCAGTTTTGGAGAAATaGCAAAATTTCCATTGCACA +
Preference number: 4 (lower is better)
Translates to: SAAWVLALQGQQLCPPPCPVLEK*QNFHCT
Trigger: TGTGCAATGGAAATTTTGCCATTTCTCCAAAACTGG...GCATGGGGGTGGACAAAGTTGCTGGCCCTGAAGTGCTAGAACCCATGCAGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTCAGCACAGCACCTTCTaGCCAATGTTTGCTTTCATT +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASQHSTF*PMFAFI
Trigger: AATGAAAGCAAACATTGGCCAGAAGGTGCTGTGCTG...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR CAA 72 bp CCAAATGTACAAGGAAAGTGCTTCAGAGCCTCTGCCTaGCGCTCCTTTTCTGCAAGTGAACAAAGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: PNVQGKCFRASA*RSFSASEQSQE
Trigger: TTCCTGGCTTTGTTCACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGAAGCACTTTCCTTGTACATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TGCACAGACCTGCCGGGCACTACAGCCACTCTTGATAACATCCAGTTTCTGGGGGTCTTTATATCTCTATaGAGGATTCCAGCTTTATGG +
Preference number: 4 (lower is better)
Translates to: CTDLPGTTATLDNIQFLGVFISL*RIPALW
Trigger: CCATAAAGCTGGAATCCTTCATAGAGATATAAAGAC...CCCCAGAAACTGGATGTTATCAAGAGTGGCTGTAGTGCCCGGCAGGTCTGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR TCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGGTCTTTATATCTCTATaGAGGATTCCAGCTTTATGG +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGVFISL*RIPALW
Trigger: CCATAAAGCTGGAATCCTTCATAGAGATATAAAGAC...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAGACTTCACTGGTTCGTaGTGTTACTACAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLDFTGS*CYYSNG
Trigger: CCCATTGCTGTAGTAACATCACGAACCAGTGAAGTC...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCAGTTCCTTCTCCACTGTaGCCACAGCAAAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: PREVVTWLCYARETKFSSVPSPL*PQQSGY
Trigger: ATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAAC...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp ATTCCTTTTGCAAGTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGTTCCTTCTCCACTGTaGCCACAGCAAAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: IPFASSTCSVRLQGLPGFVPSPL*PQQSGY
Trigger: ATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAAC...AAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CAGCAACTTTGTCCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCAGCCATAATAATCTaGTCCGAAGGCATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: QQLCPPPCSHNNLIRRHRAAIII*SEGIEL
Trigger: CAGCTCTATGCCTTCGGATCAGATTATTATGGCTGC...TCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAGTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
CDS-3UTR TCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCATAATAATCCTCTTCTaGATCCAAACCCAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTIIILF*IQTQSS
Trigger: GGACGACTGGGTTTGGATTCAGAAGAGGATTATTAT...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGCCCCAGGCAAAAATGTaGTTATCATCAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQPQAKM*LSSVAA
Trigger: TGCTGCCACTGATGATAATCACATTTTTGCCTGGGG...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCAATACTTTCTCAACGATaGGAATGGTATGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPILSQR*EWYAIH
Trigger: GTGGATGGCATACCATTCTCATCGTTGAGAAAGTAT...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TGGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTGAAGCACAGGTTTCAGATTCCTGCTaGCTGTCCTCTTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: WMFYPQRLRSMHRLTEAQVSDSC*LSSSSP
Trigger: TGGTGAAGAAGAGGACAGTCAGCAGGAATCTGAAAC...CTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCCTGAAAACGCTGCACTaGGAGGAGATGGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCLKTLH*EEMGCQ
Trigger: CTGACAGCCCATCTCCTCTCAGTGCAGCGTTTTCAG...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTCTGAAAACGCTGCACTaGGAGGAGATGGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: ASSFTPSPFELVSVCILVLKTLH*EEMGCQ
Trigger: CTGACAGCCCATCTCCTCTCAGTGCAGCGTTTTCAG...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCACTTCAGAGGCCACTTTaGGTCCTTGCAGCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PREVVTWLCYARETKFSSLQRPL*VLAALH
Trigger: ATGAAGAGCTGCAAGGACTCAAAGTGGCCTCTGAAG...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp TGGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTGAAGCACAGCTCTTAAGGCTATTCTaGCTGCCCCATGGACTCAAT +
Preference number: 4 (lower is better)
Translates to: WMFYPQRLRSMHRLTEAQLLRLF*LPHGLN
Trigger: ATTGAGTCCATGGGGCAGTCAGAATAGCCTTAAGAG...CTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGACCTCTTCTCCTTCATaGTTTTCTCTTAAGGCTATT +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGTSSPS*FSLKAI
Trigger: AATAGCCTTAAGAGAAAATCATGAAGGAGAAGAGGT...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAATCATGGGCAGAAGACTaGGAGCCCTCTAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKSWAED*EPSKPS
Trigger: AGAGGGCTTAGAGGGCTCTCAGTCTTCTGCCCATGA...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTGTTGCATTTACATGCTaGACCAAAACCCACTGTTAC +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASVAFTC*TKTHCY
Trigger: GTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAAC...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATTGCTTTAAACTTCAGTaGAATGCTCAGCCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHCFKLQ*NAQPRE
Trigger: TTCTCTTGGCTGAGCATTTCACTGAAGTTTAAAGCA...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTTGGAGTGCAGTGGAGTaGTCTTGGCCCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGWSAVE*SWPTAS
Trigger: GCTTGCAGTGGGCCAAGATCACTCCACTGCACTCCA...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR GCA 90 bp GGTACCACACCACCATCAGTACGCAGTAATAGAACCAGGAAAGAAAGCCCACAGGCAATAATGTTGTCGTaGTGCAGCAGTGCCAGAATA +
Preference number: 4 (lower is better)
Translates to: GTTPPSVRSNRTRKESPQAIMLS*CSSARI
Trigger: TATTCTGGCACTGCTGCAGCACGACAACATTATTGC...CTGTGGGCTTTCTTTCCTGGTTCTATTACTGCGTACTGATGGTGGTGTGGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS-3UTR GCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATTGGTCTCTTTGTAGGTaGATTAAGCAGAGTGACTTT +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHWSLCR*IKQSDF
Trigger: AAAGTCACTCTGCTTAATGCACCTACAAAGAGACCA...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAGTGCTTCAGTCACAGTaGTTGACCTTGGTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLVLQSQ*LTLVSL
Trigger: CAAAGAGACCAAGGTCAAGCACTGTGACTGAAGCAC...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAATTCCCTGCACAGACCTaGCGGGCACTACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQFPAQT*RALQPL
Trigger: GAGTGGCTGTAGTGCCCGGCAGGTCTGTGCAGGGAA...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTAAAGTGGGTATTCCCTaGACAGACCTGCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: ASSFTPSPFELVSVCILVKVGIP*TDLPGT
Trigger: AGTGCCCGGCAGGTCTGTGCAGGGAATACCCACTTT...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TCAACTTCCATGGCCCGAATTCCTTGCACGATCTTCACACACAGGTTAAGTGGGAGTTTAGTGCCTCCTTaGATGTTCACCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: STSMARIPCTIFTHRLSGSLVPP*MFTQVY
Trigger: GTACACTTGGGTGAACATGCAAGGAGGCACTAAACT...CCCACTTAACCTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCATGGAAGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR GCA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCACGGATAGCTTTGCCTTaGAACTTTTCCACATGCTTT +
Preference number: 4 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPRIALP*NFSTCF
Trigger: AAAGCATGTGGAAAAGTTGCAAGGCAAAGCTATCCG...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTTCTCCACAGGAGACCTaGTCCACTGGATTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: YSLWLASFSAHNAYETITSPQET*STGLLR
Trigger: CCTCAGCAATCCAGTGGAGCAGGTCTCCTGTGGAGA...AGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR GCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATGGGAACTTCATGGTATaGTTCATGGTTGATAATTCC +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHGNFMV*FMVDNS
Trigger: GGAATTATCAACCATGAAGCATACCATGAAGTTCCC...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGCAAAGCCAGGAAAGCTaGTCTCTGCATTCGGTAAGT +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQQSQES*SLHSVS
Trigger: ACTTACCGAATGCAGAGAGCAGCTTTCCTGGCTTTG...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTACAAAGCCAGGAAAGCTaGTCTCTGCATTCGGTAAGT +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLQSQES*SLHSVS
Trigger: ACTTACCGAATGCAGAGAGCAGCTTTCCTGGCTTTG...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTACTCCCAGGGTTTGGTaGTGGCTTTGGGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGTPRVW*WLWATQ
Trigger: CTGAGTGGCCCAAAGCCAGCACCAAACCCTGGGAGT...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCAAGGAAGCAGTTGTTTaGTCTCATTTTGCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISKEAVV*SHFAKE
Trigger: TTCTTTAGCAAAATGAGAGCAAACAACTGCTTCCTT...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR GCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTACATGTGGATTGCTTTaGTCCACAGATGTTTTATTT +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSTCGLL*STDVLF
Trigger: AAATAAAACATCTGTGGAGCAAAGCAATCCACATGT...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR GCA 90 bp GCATACAACTTTGAAGTCAGGTTGTATACCTGTGAAGAAGTGGACAGAGACAAGTCGGGAGGTGGTGGTTaGAATGAGCCCAGATCATGC +
Preference number: 4 (lower is better)
Translates to: AYNFEVRLYTCEEVDRDKSGGGG*NEPRSC
Trigger: GCATGATCTGGGCTCATTGCAACCACCACCTCCCGA...CTTGTCTCTGTCCACTTCTTCACAGGTATACAACCTGACTTCAAAGTTGTATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTATGGAGACATGTAATATaGGGTTCCCACAAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLWRHVI*GSHKRL
Trigger: GAGACGCTTGTGGGAACCCCATATTACATGTCTCCA...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CTTTGTCCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACTCCTTGACAGAGCTCTaGAGACATGTAATATGGGGT +
Preference number: 4 (lower is better)
Translates to: LCPPPCSHNNLIRRHRADSLTEL*RHVIWG
Trigger: ACCCCATATTACATGTCTCCAGAGCTCTGTCAAGGA...GTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATAATTCCAAAGAGTACTaGCTAGAGTCAACTTCCATG +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHNSKEY*LESTSM
Trigger: CATGGAAGTTGACTCTAGCCAGTACTCTTTGGAATT...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AAGTTCATCTGCAGTAGGTCTCTGCTCAGGATCCTGGTCAAGGCACGAATGAACCTTTTCCACATGCTTTaGCTGTCGATAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: KFICSRSLLRILVKARMNLFHML*LSIGGF
Trigger: AAAGCCTCCTATCGACAGCCAAAGCATGTGGAAAAG...GTTCATTCGTGCCTTGACCAGGATCCTGAGCAGAGACCTACTGCAGATGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CCA 90 bp GCCCCAAGAATAGACTTCCTTGTTTCGTGTCAGAACCACCACATGATTATCTCCAGAAGTTCAGCTGCATaGGTTCTAGCACTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: APRIDFLVSCQNHHMIISRSSAA*VLALQG
Trigger: GCCCTGAAGTGCTAGAACCCATGCAGCTGAACTTCT...GGAGATAATCATGTGGTGGTTCTGACACGAAACAAGGAAGTCTATTCTTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
CDS-3UTR CCA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTAACATCCACCTTTTGTaGTGTATAATAATCCTCTTC +
Preference number: 4 (lower is better)
Translates to: CLSRAMGFSPSISLYATSNIHLL*CIIILF
Trigger: GAAGAGGATTATTATACACCACAAAAGGTGGATGTT...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACAGAAACACAGTTCCAATaGATAAGCCACTGCTATTGG +
Preference number: 4 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETETQFQ*ISHCYW
Trigger: CCAATAGCAGTGGCTTATCCATTGGAACTGTGTTTC...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCTGCTGTGAAGTTCTTTaGGTCCCAGTCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPCCEVL*VPVSWG
Trigger: CCCCCAGGAGACTGGGACCCAAAGAACTTCACAGCA...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp ATTCCTTTTGCAAGTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGTTTGGTGCTGGCTTTaGGCCACTCAGGTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: IPFASSTCSVRLQGLPGFVWCWL*ATQVGK
Trigger: TTTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAAC...AAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCAGTTTGGTGCTGGCTTTaGGCCACTCAGGTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PREVVTWLCYARETKFSSVWCWL*ATQVGK
Trigger: TTTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAAC...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAAGGGACTCCCAGGGTTTaGTGCTGGCTTTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQGTPRV*CWLWAT
Trigger: AGTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCC...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGTTATGCCACCAGTTTTaGAGAAATGGCAAAATTTCC +
Preference number: 4 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGLCHQF*RNGKIS
Trigger: GGAAATTTTGCCATTTCTCCAAAACTGGTGGCATAA...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAGTCCCAGGCACAATATaGGAAAGTGCAAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKVPGTI*ESANCL
Trigger: GAGACAGTTTGCACTTTCCCATATTGTGCCTGGGAC...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCCATCCCCCTTTGAACTaGTTTCTGTTTGCATACTTG +
Preference number: 4 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTHPPLN*FLFAYL
Trigger: CAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATG...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCGCTGGATGTTAGTAAGGTCATAGATCCGGGCCCTCCAGAGAGAACAAATTGTAGAGAAGTTGTAACTTaGCTGTGCTATGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SLDVSKVIDPGPPERTNCREVVT*LCYARE
Trigger: CTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCT...ACAATTTGTTCTCTCTGGAGGGCCCGGATCTATGACCTTACTAACATCCAGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR CCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTCAGGCTGGAGTGCAGTaGAGTGATCTTGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGQAGVQ*SDLGPL
Trigger: CAGTGGGCCAAGATCACTCCACTGCACTCCAGCCTG...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR CCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTGCCAAGGTCACAAAATaGCAACATGTGGATTGCTTT +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASAKVTK*QHVDCF
Trigger: AAAGCAATCCACATGTTGCCATTTTGTGACCTTGGC...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR TCA 90 bp TACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTTCCCAAAGTCCGAGTTaGTGGAATCGCAGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: YSLWLASFSAHNAYETITSQSPS*WNRSVA
Trigger: AGCGACACTGCGATTCCATCAACTCGGACTTTGGGA...AGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTAACAACTTGTCCTTCTaGCGAAGGATTTTGTCATAC +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASNNLSF*RRILSY
Trigger: GTATGACAAAATCCTTCGTCAGAAGGACAAGTTGTT...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGCCCAGATATCAGACTTaGAATTGTACTTTACTCCTT +
Preference number: 4 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALPRYQT*NCTLLL
Trigger: AAGGAGTAAAGTACAATTTCAAGTCTGATATCTGGG...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATCCCAGATATCAGACTTaGAATTGTACTTTACTCCTT +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHPRYQT*NCTLLL
Trigger: AAGGAGTAAAGTACAATTTCAAGTCTGATATCTGGG...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCGCTGGATGTTAGTAAGGTCATAGATCCGGGCCCTCCAGAGAGAACAAATTGTTGGTCAAGGCACGAATaGACCATTTGGATCAATTCC +
Preference number: 4 (lower is better)
Translates to: SLDVSKVIDPGPPERTNCWSRHE*TIWINS
Trigger: GGAATTGATCCAAATGGTTCATTCGTGCCTTGACCA...ACAATTTGTTCTCTCTGGAGGGCCCGGATCTATGACCTTACTAACATCCAGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR TCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCCTCTCCTGCGTTTCCTaGGAAGAGGGCGATCTAGAA +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCLSCVS*EEGDLE
Trigger: TTCTAGATCGCCCTCTTCTCAGGAAACGCAGGAGAG...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTAAAGTCTCACCACATGACACCTaGCGGATAGCTTTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: LWLASFSAHNAYETITKVSPHDT*RIALPC
Trigger: GCAAGGCAAAGCTATCCGTCAGGTGTCATGTGGTGA...GACTTTAGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAGAAATCATCACCACATaGCACCTGACGGATAGCTTT +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLEIITT*HLTDSF
Trigger: AAAGCTATCCGTCAGGTGTCATGTGGTGATGATTTC...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAGAAATCATCACCACATaGCACCTGACGGATAGCTTT +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKEIITT*HLTDSF
Trigger: AAAGCTATCCGTCAGGTGTCATGTGGTGATGATTTC...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTACAGTCACACAGACAGTaGAATCATCACCACATGACA +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLQSHRQ*NHHHMT
Trigger: TGTCATGTGGTGATGATTTCACTGTCTGTGTGACTG...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTAAAGTCGCTCCACTGGATTGCTaGGGAAGAAGTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LWLASFSAHNAYETITKVAPLDC*GRSSAA
Trigger: TGCAGCTGAACTTCTTCCTCAGCAATCCAGTGGAGC...GACTTTAGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAGGCCAGCACTTTGCCTaGCTGGGTCAACAGAAATGT +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKGQHFA*LGQQKC
Trigger: ACATTTCTGTTGACCCAGTCAGGCAAAGTGCTGGCC...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp ATAGCATGTACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGAGGCCAGCACTTTGCCTaGCTGGGTCAACAGAAATGT +
Preference number: 4 (lower is better)
Translates to: IACTLCGWLLFLHTMPMRGQHFA*LGQQKC
Trigger: ACATTTCTGTTGACCCAGTCAGGCAAAGTGCTGGCC...TCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCTCAATAGCAGCTGTGTaGGTCTTGCCTGGGGCAATG +
Preference number: 4 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPSIAAV*VLPGAM
Trigger: CATTGCCCCAGGCAAGACTCACACAGCTGCTATTGA...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GCCCCAAGAATAGACTTCCTTGTTTCGTGTCAGAACCACCACATGATTATCTCCCCCCAGGCAAAAATGTaGTTATCATCAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: APRIDFLVSCQNHHMIISPQAKM*LSSVAA
Trigger: TGCTGCCACTGATGATAATCACATTTTTGCCTGGGG...GGAGATAATCATGTGGTGGTTCTGACACGAAACAAGGAAGTCTATTCTTGGGGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp ATTCCTTTTGCAAGTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTCCCCAGGCAAAAATGTaGTTATCATCAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: IPFASSTCSVRLQGLPGFPQAKM*LSSVAA
Trigger: TGCTGCCACTGATGATAATCACATTTTTGCCTGGGG...AAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCAGACAGGTCCGGGACATaGTGCAGAGATCCAAAAATA +
Preference number: 4 (lower is better)
Translates to: PREVVTWLCYARETKFSSDRSGT*CRDPKI
Trigger: TATTTTTGGATCTCTGCATCATGTCCCGGACCTGTC...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAATCTTTCTCAGATTCTaGAAACGCTGCACTGAGAGG +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKIFLRF*KRCTER
Trigger: CCTCTCAGTGCAGCGTTTTCAGAATCTGAGAAAGAT...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TGGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTGAAGCACAGTCTTCCTTTGCTGTCTaGGTTCCTTTGGAATGCATC +
Preference number: 4 (lower is better)
Translates to: WMFYPQRLRSMHRLTEAQSSFAV*VPLECI
Trigger: GATGCATTCCAAAGGAACTCAGACAGCAAAGGAAGA...CTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGTCTTCCTTTGCTGTCTaGGTTCCTTTGGAATGCATC +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQSSFAV*VPLECI
Trigger: GATGCATTCCAAAGGAACTCAGACAGCAAAGGAAGA...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAATCTTCCTTTGCTGTCTaGGTTCCTTTGGAATGCATC +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKSSFAV*VPLECI
Trigger: GATGCATTCCAAAGGAACTCAGACAGCAAAGGAAGA...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAGGTGGGATCAACAGATaGGGTACAGAGCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKGGINR*GTELLL
Trigger: CAACAGCAGCTCTGTACCTCATCTGTTGATCCCACC...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GCATACAACTTTGAAGTCAGGTTGTATACCTGTGAAGAAGTGGACAGAGACAAGCCAGCGCAATTAAGGTaGGCACTGTGTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: AYNFEVRLYTCEEVDRDKPAQLR*ALCLLF
Trigger: GAAGAGGAGACACAGTGCTCACCTTAATTGCGCTGG...CTTGTCTCTGTCCACTTCTTCACAGGTATACAACCTGACTTCAAAGTTGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGAAACAAGCCCTAGATTaGCTCCATCAGACATATTTT +
Preference number: 4 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALKQALD*LHQTYF
Trigger: AAAATATGTCTGATGGAGTCAATCTAGGGCTTGTTT...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAGCTGCACAGAGTAACTaGACTTTTTCGAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLAAQSN*TFSKQA
Trigger: GGCTTGTTTCGAAAAAGTTCAGTTACTCTGTGCAGC...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCGCATTGGTCACAGCCTaGAACACCAGCTGTGTGATG +
Preference number: 4 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPALVTA*NTSCVM
Trigger: CATCACACAGCTGGTGTTTCAGGCTGTGACCAATGC...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCGCATTGGTCACAGCCTaGAACACCAGCTGTGTGATG +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCALVTA*NTSCVM
Trigger: CATCACACAGCTGGTGTTTCAGGCTGTGACCAATGC...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCAATGGACTCAATTCTCTaGGACACCTCATCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: PREVVTWLCYARETKFSSMDSIL*DTSSLR
Trigger: TCTGAGGGATGAGGTGTCTCAGAGAATTGAGTCCAT...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp CCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACCCTCATAGATGCATACAACTTTaGAGTCAGGTTGTATACCTG +
Preference number: 4 (lower is better)
Translates to: PPPCSHNNLIRRHRADPHRCIQL*SQVVYL
Trigger: CAGGTATACAACCTGACTTCAAAGTTGTATGCATCT...ATGAGGGTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
CDS-3UTR GCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGGCAATAATGTTGTCGTaGTGCAGCAGTGCCAGAATA +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQAIMLS*CSSARI
Trigger: TATTCTGGCACTGCTGCAGCACGACAACATTATTGC...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CAGCAACTTTGTCCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAAATGACGCAGCCAACTaGCCAGATATCAGACTTGAA +
Preference number: 4 (lower is better)
Translates to: QQLCPPPCSHNNLIRRHRNDAAN*PDIRLE
Trigger: TTCAAGTCTGATATCTGGGCAGTTGGCTGCGTCATT...TCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAGTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR GCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAAATGACGCAGCCAACTaGCCAGATATCAGACTTGAA +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKNDAAN*PDIRLE
Trigger: TTCAAGTCTGATATCTGGGCAGTTGGCTGCGTCATT...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp ATAGCATGTACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGATCTGCAGTAGGTCTCTaGTCAGGATCCTGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: IACTLCGWLLFLHTMPMRSAVGL*SGSWSR
Trigger: CCTTGACCAGGATCCTGAGCAGAGACCTACTGCAGA...TCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR GCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCTCTGCAGTAGGTCTCTaGTCAGGATCCTGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPSAVGL*SGSWSR
Trigger: CCTTGACCAGGATCCTGAGCAGAGACCTACTGCAGA...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACATGGTCTCTTTGTAGGTaGATTAAGCAGAGTGACTTT +
Preference number: 4 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETWSLCR*IKQSDF
Trigger: AAAGTCACTCTGCTTAATGCACCTACAAAGAGACCA...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GCCCCAAGAATAGACTTCCTTGTTTCGTGTCAGAACCACCACATGATTATCTCCGTGCTTCAGTCACAGTaGTTGACCTTGGTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: APRIDFLVSCQNHHMIISVLQSQ*LTLVSL
Trigger: CAAAGAGACCAAGGTCAAGCACTGTGACTGAAGCAC...GGAGATAATCATGTGGTGGTTCTGACACGAAACAAGGAAGTCTATTCTTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
CDS-3UTR GCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTTCTCCACAGGAGACCTaGTCCACTGGATTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGSPQET*STGLLR
Trigger: CCTCAGCAATCCAGTGGAGCAGGTCTCCTGTGGAGA...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTGGGAACTTCATGGTATaGTTCATGGTTGATAATTCC +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASGNFMV*FMVDNS
Trigger: GGAATTATCAACCATGAAGCATACCATGAAGTTCCC...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAATTCCCAACGCCCAGCTaGCCACACTTGTTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQFPTPS*PHLLQP
Trigger: TGGCTGCAACAAGTGTGGGCAGCTGGGCGTTGGGAA...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TGCAGTTGGGTAAAAATCTGGAGGTTTTCTTGCTGTAGCTTCTGTTGTTCAGCCACGATGAGAATGGTATaGCATCCACGGCAAGACAGG +
Preference number: 4 (lower is better)
Translates to: CSWVKIWRFSCCSFCCSATMRMV*HPRQDR
Trigger: CCTGTCTTGCCGTGGATGGCATACCATTCTCATCGT...GGCTGAACAACAGAAGCTACAGCAAGAAAACCTCCAGATTTTTACCCAACTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR GCA 90 bp AGAATTCAATACTTTCTCAACGATGAGAATGGTATGCCATCCACGGCAAGACAGTCAGAGCCTCTGCCTTaGGCTCCTTTTCTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: RIQYFLNDENGMPSTARQSEPLP*APFLQV
Trigger: CACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGA...CTGTCTTGCCGTGGATGGCATACCATTCTCATCGTTGAGAAAGTATTGAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR GCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGAACTACTTCACCACTCTaGAGAGGACACTGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRTTSPL*RGHWAG
Trigger: GCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGT...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACAAAGCATCAGCCTTTATaGCACCAGTTTTGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETKHQPL*HQFWRN
Trigger: ATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTT...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTAAGCATCAGCCTTTATaGCACCAGTTTTGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: SSMAEAILMMNTQTDPASKHQPL*HQFWRN
Trigger: ATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTT...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp ATTCCTTTTGCAAGTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTTGTAAGATTCTCTTTTaGCAGGTGCGGTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: IPFASSTCSVRLQGLPGFCKILF*QVRWLT
Trigger: TGTGAGCCACCGCACCTGGCAAAAGAGAATCTTACA...AAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAATAACATCCAGTTTCTaGGGGGTGGATTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKITSSF*GVDFPP
Trigger: TGGTGGAAAATCCACCCCCCAGAAACTGGATGTTAT...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp ATAGCATGTACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGAGTGACCACAGCAAAGTaGGTATTCCCTGCACAGACC +
Preference number: 4 (lower is better)
Translates to: IACTLCGWLLFLHTMPMRVTTAK*VFPAQT
Trigger: GGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCAC...TCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAACTTTTCCACATGCTTTaGCTGTCGATAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKLFHML*LSIGGF
Trigger: AAAGCCTCCTATCGACAGCCAAAGCATGTGGAAAAG...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGCTTTTCCACATGCTTTaGCTGTCGATAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQLFHML*LSIGGF
Trigger: AAAGCCTCCTATCGACAGCCAAAGCATGTGGAAAAG...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GCCCCAAGAATAGACTTCCTTGTTTCGTGTCAGAACCACCACATGATTATCTCCAGCACTTTGCCTGACTaGGTCAACAGAAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: APRIDFLVSCQNHHMIISSTLPD*VNRNVP
Trigger: TGGGACATTTCTGTTGACCCAGTCAGGCAAAGTGCT...GGAGATAATCATGTGGTGGTTCTGACACGAAACAAGGAAGTCTATTCTTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCTCATGGTATGCTTCATaGTTGATAATTCCCGACATG +
Preference number: 4 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTSWYAS*LIIPDM
Trigger: CATGTCGGGAATTATCAACCATGAAGCATACCATGA...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAACATGTGGTCTCTCTGTaGGGGTCATTGCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKHVVSL*GSLPGG
Trigger: GCCGCCTGGCAATGACCCCCACAGAGAGACCACATG...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATTTCAACTTCTGCAGTTaGGTAAAAATCTGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHFNFCS*VKIWRF
Trigger: AAACCTCCAGATTTTTACCCAACTGCAGAAGTTGAA...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp ATTCCTTTTGCAAGTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTTCAGACATATTTTCCTaGACTCAGGGCTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: IPFASSTCSVRLQGLPGFSDIFS*TQGSQE
Trigger: CTCTTGGGAGCCCTGAGTCCAGGAAAATATGTCTGA...AAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAACCCAGGGTTTGGTGCTaGCTTTGGGCCACTCAGGTA +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQPRVWC*LWATQV
Trigger: TACCTGAGTGGCCCAAAGCCAGCACCAAACCCTGGG...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACGGGACTCCCAGGGTTTaGTGCTGGCTTTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHGTPRV*CWLWAT
Trigger: AGTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCC...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGTTTTACAAGGCTAGGTaGAAATACAAAGCTCACATC +
Preference number: 4 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALFYKAR*KYKAHI
Trigger: GATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCGCTGGATGTTAGTAAGGTCATAGATCCGGGCCCTCCAGAGAGAACAAATTGTCGGAGGCTTAGAATCTaGATGTTTTATCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SLDVSKVIDPGPPERTNCRRLRI*MFYPQR
Trigger: TCTCTGGGGATAAAACATCCAGATTCTAAGCCTCCG...ACAATTTGTTCTCTCTGGAGGGCCCGGATCTATGACCTTACTAACATCCAGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR CCA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGCTGACATTTAAAAACTaGGATATGGAACATCTCTTG +
Preference number: 4 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQLTFKN*DMEHLL
Trigger: CAAGAGATGTTCCATATCCCAGTTTTTAAATGTCAG...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR CCA 90 bp GGTACCACACCACCATCAGTACGCAGTAATAGAACCAGGAAAGAAAGCCCACAGATGAATATCAGAGCCTaGAAGGAGTCTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GTTPPSVRSNRTRKESPQMNIRA*KESLPQ
Trigger: TTGAGGAAGAGACTCCTTCCAGGCTCTGATATTCAT...CTGTGGGCTTTCTTTCCTGGTTCTATTACTGCGTACTGATGGTGGTGTGGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553945.1
3UTR CAA 72 bp TTTACCTTATCTGCCTGGTACCACAGGCACTTGGATTaGGGATCGCTGGATGTTAGTAAGGTCATAGATCCG +
Preference number: 4 (lower is better)
Translates to: FTLSAWYHRHLD*GSLDVSKVIDP
Trigger: CGGATCTATGACCTTACTAACATCCAGCGATCCCAAATCCAAGTGCCTGTGGTACCAGGCAGATAAGGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
3UTR CAA 72 bp CTGCTCAGGATCCTGGTCAAGGCACGAATGAACCATTaGGATCAATTCCAAAGAGTACTGGCTAGAGTCAAC +
Preference number: 4 (lower is better)
Translates to: LLRILVKARMNH*DQFQRVLARVN
Trigger: GTTGACTCTAGCCAGTACTCTTTGGAATTGATCCAAATGGTTCATTCGTGCCTTGACCAGGATCCTGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
3UTR CAA 72 bp AGCTTATTGAATTCATTGAGTCCACAGGCCAGCACTTaGCCTGACTGGGTCAACAGAAATGTCCCATCACAG +
Preference number: 4 (lower is better)
Translates to: SLLNSLSPQAST*PDWVNRNVPSQ
Trigger: CTGTGATGGGACATTTCTGTTGACCCAGTCAGGCAAAGTGCTGGCCTGTGGACTCAATGAATTCAATAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp CCCACAAGCGTCTCAGCCATGGAATACTCAGAATTAAGTTTCTTTGCTAGGCCATTGTACTTTACTCCTTaGCAGAGCTCTGGAGACATG +
Preference number: 4 (lower is better)
Translates to: PTSVSAMEYSELSFFARPLYFTP*QSSGDM
Trigger: CATGTCTCCAGAGCTCTGTCAAGGAGTAAAGTACAA...TGGCCTAGCAAAGAAACTTAATTCTGAGTATTCCATGGCTGAGACGCTTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554258.1
CDS-3UTR TCA 90 bp GCCCCAAGAATAGACTTCCTTGTTTCGTGTCAGAACCACCACATGATTATCTCCTTGTACTTTACTCCTTaGCAGAGCTCTGGAGACATG +
Preference number: 4 (lower is better)
Translates to: APRIDFLVSCQNHHMIISLYFTP*QSSGDM
Trigger: CATGTCTCCAGAGCTCTGTCAAGGAGTAAAGTACAA...GGAGATAATCATGTGGTGGTTCTGACACGAAACAAGGAAGTCTATTCTTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR TCA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTGTTCCTTCTCCACTGTaGCCACAGCAAAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: ASSFTPSPFELVSVCILVVPSPL*PQQSGY
Trigger: ATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAAC...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCGTTCCTTCTCCACTGTaGCCACAGCAAAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCVPSPL*PQQSGY
Trigger: ATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAAC...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp AGAGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAATCTCCATGGCCCAGCTaGCCATGGAGTTTAGTGCCT +
Preference number: 4 (lower is better)
Translates to: REAKNISVQMSLALFLFQSPWPS*PWSLVP
Trigger: AGGCACTAAACTCCATGGTCAGCTGGGCCATGGAGA...TTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp ATAGCATGTACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGAGTCAGAACCACCACATaGTTATCTCCACAGGAGACC +
Preference number: 4 (lower is better)
Translates to: IACTLCGWLLFLHTMPMRVRTTT*LSPQET
Trigger: GGTCTCCTGTGGAGATAATCATGTGGTGGTTCTGAC...TCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGATAATAATCCTCTTCTaGATCCAAACCCAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQIIILF*IQTQSS
Trigger: GGACGACTGGGTTTGGATTCAGAAGAGGATTATTAT...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAATAATAATCCTCTTCTaGATCCAAACCCAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLIIILF*IQTQSS
Trigger: GGACGACTGGGTTTGGATTCAGAAGAGGATTATTAT...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAAGGATTCAGCCGAGGTaGCGAGGCTTCTACTTGGGG +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKRIQPR*RGFYLG
Trigger: CCCCAAGTAGAAGCCTCGTCACCTCGGCTGAATCCT...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCAAAACAAGCCCTAGATTaGCTCCATCAGACATATTTT +
Preference number: 4 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPKQALD*LHQTYF
Trigger: AAAATATGTCTGATGGAGTCAATCTAGGGCTTGTTT...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp GCATACAACTTTGAAGTCAGGTTGTATACCTGTGAAGAAGTGGACAGAGACAAGCAAAGAAGATCCCATTaGACAGAGTTGCCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: AYNFEVRLYTCEEVDRDKQRRSH*TELPVP
Trigger: CGGGACAGGCAACTCTGTTCAATGGGATCTTCTTTG...CTTGTCTCTGTCCACTTCTTCACAGGTATACAACCTGACTTCAAAGTTGTATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR TCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAGTTGCATTTACATGCTaGACCAAAACCCACTGTTAC +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLVAFTC*TKTHCY
Trigger: GTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAAC...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCACATGCACAGGCTTACTaGAGCACAGTACTGATTAAG +
Preference number: 4 (lower is better)
Translates to: PREVVTWLCYARETKFSSHAQAY*STVLIK
Trigger: CTTAATCAGTACTGTGCTTCAGTAAGCCTGTGCATG...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp CCACCATCAGTACGCAGTAATAGAACCAGGAAAGAAAGCCCACAGAGAATCATGGCCCACAGAGAATCATaGTGTGGAGGTAAAACGTTT +
Preference number: 4 (lower is better)
Translates to: PPSVRSNRTRKESPQRIMAHRES*CGGKTF
Trigger: AAACGTTTTACCTCCACATCATGATTCTCTGTGGGC...CATGATTCTCTGTGGGCTTTCTTTCCTGGTTCTATTACTGCGTACTGATGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS-3UTR TCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCAACCCAGTCGTCCTGTaGAGAAGTGGACAGAGACAA +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCNPVVL*RSGQRQ
Trigger: TTGTCTCTGTCCACTTCTTCACAGGACGACTGGGTT...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678037.1
CDS-3UTR GCA 90 bp TTAAATTTTACACAGATAGAGCTATATAGCATGTACTCTTTGTGGCTGGCTTCTGTGAGTCATCCTCGGTaGGGCGGTACAGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LNFTQIELYSMYSLWLASVSHPR*GGTAWL
Trigger: AAGCCACGCTGTACCGCCGCACCGAGGATGACTCAC...AGAAGCCAGCCACAAAGAGTACATGCTATATAGCTCTATCTGTGTAAAATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR GCA 90 bp ACACCACCATCAGTACGCAGTAATAGAACCAGGAAAGAAAGCCCACAGAGAATCGTCGTGCTGCAGCAGTaGCAGAATAACAATCTCATT +
Preference number: 4 (lower is better)
Translates to: TPPSVRSNRTRKESPQRIVVLQQ*QNNNLI
Trigger: AATGAGATTGTTATTCTGGCACTGCTGCAGCACGAC...GATTCTCTGTGGGCTTTCTTTCCTGGTTCTATTACTGCGTACTGATGGTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS-3UTR GCA 90 bp ATTCCTTTTGCAAGTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGTCGTGCTGCAGCAGTaGCAGAATAACAATCTCATT +
Preference number: 4 (lower is better)
Translates to: IPFASSTCSVRLQGLPGFVVLQQ*QNNNLI
Trigger: AATGAGATTGTTATTCTGGCACTGCTGCAGCACGAC...AAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCAGCAATAATGTTGTCGTaGTGCAGCAGTGCCAGAATA +
Preference number: 4 (lower is better)
Translates to: PREVVTWLCYARETKFSSAIMLS*CSSARI
Trigger: TATTCTGGCACTGCTGCAGCACGACAACATTATTGC...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp TCGCTGGATGTTAGTAAGGTCATAGATCCGGGCCCTCCAGAGAGAACAAATTGTTTCCAGCTTTATGGATaGAGCTCACTGCTGAAACAA +
Preference number: 4 (lower is better)
Translates to: SLDVSKVIDPGPPERTNCFQLYG*SSLLKQ
Trigger: TTGTTTCAGCAGTGAGCTGCATCCATAAAGCTGGAA...ACAATTTGTTCTCTCTGGAGGGCCCGGATCTATGACCTTACTAACATCCAGCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR GCA 90 bp TACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTATGGCCCGAATTCCTTaGACGATCTTCACACACAGG +
Preference number: 4 (lower is better)
Translates to: YSLWLASFSAHNAYETITMARIP*TIFTHR
Trigger: CCTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCAT...AGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR GCA 90 bp CAGCTGACCATGGAGTTTAGTGCCTCCTTGCATGTTCACCCAAGTGTACAGTTCTGGTCTCTTTGTAGGTaGATTAAGCAGAGTGACTTT +
Preference number: 4 (lower is better)
Translates to: QLTMEFSASLHVHPSVQFWSLCR*IKQSDF
Trigger: AAAGTCACTCTGCTTAATGCACCTACAAAGAGACCA...GAACTGTACACTTGGGTGAACATGCAAGGAGGCACTAAACTCCATGGTCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR GCA 90 bp TCGCTGGATGTTAGTAAGGTCATAGATCCGGGCCCTCCAGAGAGAACAAATTGTCGGATAGCTTTGCCTTaGAACTTTTCCACATGCTTT +
Preference number: 4 (lower is better)
Translates to: SLDVSKVIDPGPPERTNCRIALP*NFSTCF
Trigger: AAAGCATGTGGAAAAGTTGCAAGGCAAAGCTATCCG...ACAATTTGTTCTCTCTGGAGGGCCCGGATCTATGACCTTACTAACATCCAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR GCA 90 bp CAAGATATAGACCATTCCCATTACTCTAGGATCCCTTCCACCTCTTCTGTTAATCACAGGCCAGCACTTTaGCTGACTGGGTCAACAGAA +
Preference number: 4 (lower is better)
Translates to: QDIDHSHYSRIPSTSSVNHRPAL*LTGSTE
Trigger: TTCTGTTGACCCAGTCAGGCAAAGTGCTGGCCTGTG...ATTAACAGAAGAGGTGGAAGGGATCCTAGAGTAATGGGAATGGTCTATATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR GCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTCACAGGCCAGCACTTTaGCTGACTGGGTCAACAGAA +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGHRPAL*LTGSTE
Trigger: TTCTGTTGACCCAGTCAGGCAAAGTGCTGGCCTGTG...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAGCTGCCCACACTTGTTaGAGCCAAAGGTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKAAHTC*SQRSAA
Trigger: GGCTGCTGACCTTTGGCTGCAACAAGTGTGGGCAGC...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAATTCCCAACGCCCAGCTaGCCACACTTGTTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKFPTPS*PHLLQP
Trigger: TGGCTGCAACAAGTGTGGGCAGCTGGGCGTTGGGAA...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp ATTCCTTTTGCAAGTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTCAATGGATAAGCCACTaGTATTGGAACGGATGGTCT +
Preference number: 4 (lower is better)
Translates to: IPFASSTCSVRLQGLPGFQWISH*YWNGWS
Trigger: AGACCATCCGTTCCAATAGCAGTGGCTTATCCATTG...AAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACAGCCAGGACAGGAGCTaGTGGCCCCATTACTGTTCC +
Preference number: 4 (lower is better)
Translates to: NKITPRSYLKGNATLQMYSQDRS*WPHYCS
Trigger: GGAACAGTAATGGGGCCAGCAGCTCCTGTCCTGGCT...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGCATCCCCACCTGCTaGCCTCCTTCTAATTTCTTG +
Preference number: 4 (lower is better)
Translates to: ASSFTPSPFELVSVCILVCIPTC*PPSNFL
Trigger: CAAGAAATTAGAAGGAGGGCAGCAGGTGGGGATGCA...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCAAATGTACAAGGAAAGTaGTTCAGAGCCTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PREVVTWLCYARETKFSSNVQGK*FRASAL
Trigger: CAAGGCAGAGGCTCTGAAGCACTTTCCTTGTACATT...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAGATGAGGTACAGAGCTaGTGTTGCTATGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKDEVQS*CCYGSH
Trigger: GTGACTGCCATAGCAACAGCAGCTCTGTACCTCATC...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACACTACTTCACCACTCTaGAGAGGACACTGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHTTSPL*RGHWAG
Trigger: GCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGT...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TACAGGAGTCTGTTCCCAGGAGGCACCAGGAATCTGAATCTAAGTCAGGCTTTGGAACTGGTTTCTGTTTaGATACTTGTTTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: YRSLFPGGTRNLNLSQALELVSV*ILVWWE
Trigger: TTCCCACCAAACAAGTATGCAAACAGAAACCAGTTC...CAAAGCCTGACTTAGATTCAGATTCCTGGTGCCTCCTGGGAACAGACTCCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR GCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGTGTGCAGATGTCCCTTaGATTGTTTCTGTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQCADVP*IVSVPR
Trigger: TCTTGGAACAGAAACAATGCAAGGGACATCTGCACA...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGCACACACAGGTTAAGTaGGTTTGTAGCATCAAACGT +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQHTQVK*VCSIKR
Trigger: ACGTTTGATGCTACAAACCCACTTAACCTGTGTGTG...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAACACACACAGGTTAAGTaGGTTTGTAGCATCAAACGT +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKHTQVK*VCSIKR
Trigger: ACGTTTGATGCTACAAACCCACTTAACCTGTGTGTG...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GTCAACTTCCATGGCCCGAATTCCTTGCACGATCTTCACACACAGGTTAAGTGGAATTCCAAAGAGTACTaGCTAGAGTCAACTTCCATG +
Preference number: 4 (lower is better)
Translates to: VNFHGPNSLHDLHTQVKWNSKEY*LESTSM
Trigger: CATGGAAGTTGACTCTAGCCAGTACTCTTTGGAATT...CCACTTAACCTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCATGGAAGTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACAAAACATAGACTTCACTaGTTCGTGATGTTACTACAG +
Preference number: 4 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETKHRLH*FVMLLQ
Trigger: CTGTAGTAACATCACGAACCAGTGAAGTCTATGTTT...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTGTGACCACAGCAAAGTaGGTATTCCCTGCACAGACC +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGVTTAK*VFPAQT
Trigger: GGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCAC...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTAAAGTCAGAAGTTCAGCTGCATaGGTTCTAGCACTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LWLASFSAHNAYETITKVRSSAA*VLALQG
Trigger: GCCCTGAAGTGCTAGAACCCATGCAGCTGAACTTCT...GACTTTAGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CCA 90 bp GCATACAACTTTGAAGTCAGGTTGTATACCTGTGAAGAAGTGGACAGAGACAAGAGAAGTTCAGCTGCATaGGTTCTAGCACTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: AYNFEVRLYTCEEVDRDKRSSAA*VLALQG
Trigger: GCCCTGAAGTGCTAGAACCCATGCAGCTGAACTTCT...CTTGTCTCTGTCCACTTCTTCACAGGTATACAACCTGACTTCAAAGTTGTATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
CDS-3UTR CCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCAGAAGTTCAGCTGCATaGGTTCTAGCACTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPRSSAA*VLALQG
Trigger: GCCCTGAAGTGCTAGAACCCATGCAGCTGAACTTCT...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGAACATCCACCTTTTGTaGTGTATAATAATCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALNIHLL*CIIILF
Trigger: GAAGAGGATTATTATACACCACAAAAGGTGGATGTT...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp ATTCCTTTTGCAAGTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTTCTTGCCTGGGGCAATaGTACGGATCTTATAAAAGG +
Preference number: 4 (lower is better)
Translates to: IPFASSTCSVRLQGLPGFSCLGQ*YGSYKR
Trigger: CCTTTTATAAGATCCGTACCATTGCCCCAGGCAAGA...AAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCTGTGTGAGTCTTGCCTaGGGCAATGGTACGGATCTT +
Preference number: 4 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPCVSLA*GNGTDL
Trigger: AAGATCCGTACCATTGCCCCAGGCAAGACTCACACA...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCGATATCAGAGCCATGTaGTCTCTCTGTGGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPDIRAM*SLCGGH
Trigger: ATGACCCCCACAGAGAGACCACATGGCTCTGATATC...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCCTGTCTGAGTTCCTTTaGAATGCATCCCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPLSEFL*NASPPA
Trigger: AGCAGGTGGGGATGCATTCCAAAGGAACTCAGACAG...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAACTGTCTGAGTTCCTTTaGAATGCATCCCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKLSEFL*NASPPA
Trigger: AGCAGGTGGGGATGCATTCCAAAGGAACTCAGACAG...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCATTATGCCACCAGTTTTaGAGAAATGGCAAAATTTCC +
Preference number: 4 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPLCHQF*RNGKIS
Trigger: GGAAATTTTGCCATTTCTCCAAAACTGGTGGCATAA...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TCAGTGGCAGCAATGGTAAACTCATCACCGCAGGAGACCCTGATCACTTGCTTCTTATGCCACCAGTTTTaGAGAAATGGCAAAATTTCC +
Preference number: 4 (lower is better)
Translates to: SVAAMVNSSPQETLITCFLCHQF*RNGKIS
Trigger: GGAAATTTTGCCATTTCTCCAAAACTGGTGGCATAA...GAAGCAAGTGATCAGGGTCTCCTGCGGTGATGAGTTTACCATTGCTGCCACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACGCCTGTCCCGAGCAATaGGGTTCTCCCCAAGCATCA +
Preference number: 4 (lower is better)
Translates to: NKITPRSYLKGNATLQMYACPEQ*GSPQAS
Trigger: TGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGC...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TGGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTGAAGCACAGCAAAATGGCAACATGTaGATTGCTTTGCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: WMFYPQRLRSMHRLTEAQQNGNM*IALLHR
Trigger: TCTGTGGAGCAAAGCAATCCACATGTTGCCATTTTG...CTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR CCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAACGGACTCATACAACTTaGAGGCCCAGAGGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQRTHTT*RPRGRP
Trigger: TGGACGACCTCTGGGCCTCCAAGTTGTATGAGTCCG...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678749.1
3UTR CAA 72 bp ACTTCAGTGAAATGCTCAGCCAAGAGAAGTTGTAACTaGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTC +
Preference number: 4 (lower is better)
Translates to: TSVKCSAKRSCN*AVLCQGDQIQF
Trigger: GAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGGCTGAGCATTTCACTGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAAACAACTTGTCCTTCTaGCGAAGGATTTTGTCATAC +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLNNLSF*RRILSY
Trigger: GTATGACAAAATCCTTCGTCAGAAGGACAAGTTGTT...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CAGCAACTTTGTCCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAAACAACTTGTCCTTCTaGCGAAGGATTTTGTCATAC +
Preference number: 4 (lower is better)
Translates to: QQLCPPPCSHNNLIRRHRNNLSF*RRILSY
Trigger: GTATGACAAAATCCTTCGTCAGAAGGACAAGTTGTT...TCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAGTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR TCA 90 bp CAGCTGACCATGGAGTTTAGTGCCTCCTTGCATGTTCACCCAAGTGTACAGTTCCCCAGATATCAGACTTaGAATTGTACTTTACTCCTT +
Preference number: 4 (lower is better)
Translates to: QLTMEFSASLHVHPSVQFPRYQT*NCTLLL
Trigger: AAGGAGTAAAGTACAATTTCAAGTCTGATATCTGGG...GAACTGTACACTTGGGTGAACATGCAAGGAGGCACTAAACTCCATGGTCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR TCA 90 bp TACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTGACTTCACTGGTTCGTaGTGTTACTACAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: YSLWLASFSAHNAYETITDFTGS*CYYSNG
Trigger: CCCATTGCTGTAGTAACATCACGAACCAGTGAAGTC...AGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp CAAGATATAGACCATTCCCATTACTCTAGGATCCCTTCCACCTCTTCTGTTAATGTTCCTTCTCCACTGTaGCCACAGCAAAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: QDIDHSHYSRIPSTSSVNVPSPL*PQQSGY
Trigger: ATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAAC...ATTAACAGAAGAGGTGGAAGGGATCCTAGAGTAATGGGAATGGTCTATATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp ATAGCATGTACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGAGCAGCCATAATAATCTaGTCCGAAGGCATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: IACTLCGWLLFLHTMPMRAAIII*SEGIEL
Trigger: CAGCTCTATGCCTTCGGATCAGATTATTATGGCTGC...TCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCGCAGCCATAATAATCTaGTCCGAAGGCATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPAAIII*SEGIEL
Trigger: CAGCTCTATGCCTTCGGATCAGATTATTATGGCTGC...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCGCAGCCATAATAATCTaGTCCGAAGGCATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCAAIII*SEGIEL
Trigger: CAGCTCTATGCCTTCGGATCAGATTATTATGGCTGC...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCATTCCCGACATGCACTaGTTCAGACCCAGCTTATTG +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCIPDMH*FRPSLL
Trigger: CAATAAGCTGGGTCTGAATCAGTGCATGTCGGGAAT...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAATTCCCGACATGCACTaGTTCAGACCCAGCTTATTG +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKIPDMH*FRPSLL
Trigger: CAATAAGCTGGGTCTGAATCAGTGCATGTCGGGAAT...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAATCAATAGCAGCTGTGTaGGTCTTGCCTGGGGCAATG +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQSIAAV*VLPGAM
Trigger: CATTGCCCCAGGCAAGACTCACACAGCTGCTATTGA...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCGTTTCAGATTCCTGCTaGCTGTCCTCTTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCVSDSC*LSSSSP
Trigger: TGGTGAAGAAGAGGACAGTCAGCAGGAATCTGAAAC...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGAGGTGGGATCAACAGATaGGGTACAGAGCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRGGINR*GTELLL
Trigger: CAACAGCAGCTCTGTACCTCATCTGTTGATCCCACC...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp AGAGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAACCAGCGCAATTAAGGTaGGCACTGTGTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: REAKNISVQMSLALFLFQPAQLR*ALCLLF
Trigger: GAAGAGGAGACACAGTGCTCACCTTAATTGCGCTGG...TTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp CGCATGGCACAAATTGGGTGGGGTTTAGAATCAGATGCTCCTCCAGATGGGAATAAACAAGCCCTAGATTaGCTCCATCAGACATATTTT +
Preference number: 4 (lower is better)
Translates to: RMAQIGWGLESDAPPDGNKQALD*LHQTYF
Trigger: AAAATATGTCTGATGGAGTCAATCTAGGGCTTGTTT...ATTCCCATCTGGAGGAGCATCTGATTCTAAACCCCACCCAATTTGTGCCATGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR TCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCCTCTTAAGGCTATTCTaGCTGCCCCATGGACTCAAT +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCLLRLF*LPHGLN
Trigger: ATTGAGTCCATGGGGCAGTCAGAATAGCCTTAAGAG...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp AGAGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGAGGATACAGGGACATaGCAGGTCAATCGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: REAKNISVQMSLALFLFQEDTGT*QVNRSS
Trigger: TGAGGACCGATTGACCTGTCATGTCCCTGTATCCTC...TTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAGGAAAGGCTCCCCTATaGACAAGACCAGGGCACTCA +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKGKAPL*TRPGHS
Trigger: TGAGTGCCCTGGTCTTGTTCATAGGGGAGCCTTTCC...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TGGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTGAAGCACAGCCTAGGCAAGTTCAATaGAATGTACACTTTAAGTGG +
Preference number: 4 (lower is better)
Translates to: WMFYPQRLRSMHRLTEAQPRQVQ*NVHFKW
Trigger: CCACTTAAAGTGTACATTTCATTGAACTTGCCTAGG...CTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR GCA 90 bp ACACCACCATCAGTACGCAGTAATAGAACCAGGAAAGAAAGCCCACAGAGAATCATAATGTTGTCGTGCTaGAGCAGTGCCAGAATAACA +
Preference number: 4 (lower is better)
Translates to: TPPSVRSNRTRKESPQRIIMLSC*SSARIT
Trigger: TGTTATTCTGGCACTGCTGCAGCACGACAACATTAT...GATTCTCTGTGGGCTTTCTTTCCTGGTTCTATTACTGCGTACTGATGGTGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS-3UTR GCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCAATAATGTTGTCGTGCTaGAGCAGTGCCAGAATAACA +
Preference number: 4 (lower is better)
Translates to: PREVVTWLCYARETKFSSIMLSC*SSARIT
Trigger: TGTTATTCTGGCACTGCTGCAGCACGACAACATTAT...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp ACACCACCATCAGTACGCAGTAATAGAACCAGGAAAGAAAGCCCACAGAGAATCTTCCAGCTTTATGGATaGAGCTCACTGCTGAAACAA +
Preference number: 4 (lower is better)
Translates to: TPPSVRSNRTRKESPQRIFQLYG*SSLLKQ
Trigger: TTGTTTCAGCAGTGAGCTGCATCCATAAAGCTGGAA...GATTCTCTGTGGGCTTTCTTTCCTGGTTCTATTACTGCGTACTGATGGTGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS-3UTR GCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCGTGCTTCAGTCACAGTaGTTGACCTTGGTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCVLQSQ*LTLVSL
Trigger: CAAAGAGACCAAGGTCAAGCACTGTGACTGAAGCAC...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAAAAGTGGGTATTCCCTaGACAGACCTGCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKKVGIP*TDLPGT
Trigger: AGTGCCCGGCAGGTCTGTGCAGGGAATACCCACTTT...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGACACAGGCCAGCACTTTaGCTGACTGGGTCAACAGAA +
Preference number: 4 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRHRPAL*LTGSTE
Trigger: TTCTGTTGACCCAGTCAGGCAAAGTGCTGGCCTGTG...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAGGGAACTTCATGGTATaGTTCATGGTTGATAATTCC +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKGNFMV*FMVDNS
Trigger: GGAATTATCAACCATGAAGCATACCATGAAGTTCCC...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCTTTAACACCAGACCCTaGAATCTCTCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPFNTRP*NLSTST
Trigger: GGTGGAGGTTGAGAGATTGCAGGGTCTGGTGTTAAA...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTCAAAGCCAGGAAAGCTaGTCTCTGCATTCGGTAAGT +
Preference number: 4 (lower is better)
Translates to: ASSFTPSPFELVSVCILVQSQES*SLHSVS
Trigger: ACTTACCGAATGCAGAGAGCAGCTTTCCTGGCTTTG...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGATCAGAGCCTCTGCCTTaGGCTCCTTTTCTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRSEPLP*APFLQV
Trigger: CACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGA...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp TGGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTGAAGCACAGGAACTGGTTTCTGTTTaGATACTTGTTTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: WMFYPQRLRSMHRLTEAQELVSV*ILVWWE
Trigger: TTCCCACCAAACAAGTATGCAAACAGAAACCAGTTC...CTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAGCAATCTCAGCTCACTaGAAACTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKAISAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGTTTGCAGTGAGCTGAGATTGC...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR GCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAGACGATGACAGTAAATaGATGCTGCTTCTTAATGTC +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKDDDSK*MLLLNV
Trigger: GACATTAAGAAGCAGCATGCATTTACTGTCATCGTC...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR GCA 90 bp GCCCCAAGAATAGACTTCCTTGTTTCGTGTCAGAACCACCACATGATTATCTCCAAAGTAAGGACCTGCTaGCCTCCTTCTAATTTCTTG +
Preference number: 4 (lower is better)
Translates to: APRIDFLVSCQNHHMIISKVRTC*PPSNFL
Trigger: CAAGAAATTAGAAGGAGGGCAGCAGGTCCTTACTTT...GGAGATAATCATGTGGTGGTTCTGACACGAAACAAGGAAGTCTATTCTTGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CCA 90 bp TACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTTGGAGACATGTAATATaGGGTTCCCACAAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: YSLWLASFSAHNAYETITWRHVI*GSHKRL
Trigger: GAGACGCTTGTGGGAACCCCATATTACATGTCTCCA...AGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CCA 90 bp TGCCCAGATATCAGACTTGAAATTGTACTTTACTCCTTGACAGAGCTCTGGAGATGGAGACATGTAATATaGGGTTCCCACAAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: CPDIRLEIVLYSLTELWRWRHVI*GSHKRL
Trigger: GAGACGCTTGTGGGAACCCCATATTACATGTCTCCA...TCTCCAGAGCTCTGTCAAGGAGTAAAGTACAATTTCAAGTCTGATATCTGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554258.1
CDS-3UTR CCA 90 bp GCATACAACTTTGAAGTCAGGTTGTATACCTGTGAAGAAGTGGACAGAGACAAGTGGAGACATGTAATATaGGGTTCCCACAAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: AYNFEVRLYTCEEVDRDKWRHVI*GSHKRL
Trigger: GAGACGCTTGTGGGAACCCCATATTACATGTCTCCA...CTTGTCTCTGTCCACTTCTTCACAGGTATACAACCTGACTTCAAAGTTGTATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAAATTCCAAAGAGTACTaGCTAGAGTCAACTTCCATG +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLNSKEY*LESTSM
Trigger: CATGGAAGTTGACTCTAGCCAGTACTCTTTGGAATT...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CTTTGTCCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACAAACATAGACTTCACTaGTTCGTGATGTTACTACAG +
Preference number: 4 (lower is better)
Translates to: LCPPPCSHNNLIRRHRADKHRLH*FVMLLQ
Trigger: CTGTAGTAACATCACGAACCAGTGAAGTCTATGTTT...GTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
CDS-3UTR CCA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACAAACATCCACCTTTTGTaGTGTATAATAATCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETNIHLL*CIIILF
Trigger: GAAGAGGATTATTATACACCACAAAAGGTGGATGTT...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTAAAGTCAGCACTTTGCCTGACTaGGTCAACAGAAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: LWLASFSAHNAYETITKVSTLPD*VNRNVP
Trigger: TGGGACATTTCTGTTGACCCAGTCAGGCAAAGTGCT...GACTTTAGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGTCATGGTATGCTTCATaGTTGATAATTCCCGACATG +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQSWYAS*LIIPDM
Trigger: CATGTCGGGAATTATCAACCATGAAGCATACCATGA...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGAGTTGGGTAAAAATCTaGAGGTTTTCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQSWVKI*RFSCCS
Trigger: GCTACAGCAAGAAAACCTCCAGATTTTTACCCAACT...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAACAGGAGACTAGAGGCTaGGTCTACAGGAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQQETRG*VYRSLF
Trigger: GAACAGACTCCTGTAGACCCAGCCTCTAGTCTCCTG...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GCCCCAAGAATAGACTTCCTTGTTTCGTGTCAGAACCACCACATGATTATCTCCCATTCAGAAAGAAAGTaGTTGGGGCTGCTGATATCA +
Preference number: 4 (lower is better)
Translates to: APRIDFLVSCQNHHMIISHSERK*LGLLIS
Trigger: TGATATCAGCAGCCCCAACCACTTTCTTTCTGAATG...GGAGATAATCATGTGGTGGTTCTGACACGAAACAAGGAAGTCTATTCTTGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CCA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCTCATTCGTTACCACATaGCTTCATAAAACACCAAAA +
Preference number: 4 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTSFVTT*LHKTPK
Trigger: TTTTGGTGTTTTATGAAGCCATGTGGTAACGAATGA...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CTTTGTCCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACTTTTACAAGGCTAGGTaGAAATACAAAGCTCACATC +
Preference number: 4 (lower is better)
Translates to: LCPPPCSHNNLIRRHRADFYKAR*KYKAHI
Trigger: GATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA...GTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCGTCCCAGGCACAATATaGGAAAGTGCAAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPVPGTI*ESANCL
Trigger: GAGACAGTTTGCACTTTCCCATATTGTGCCTGGGAC...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCACATCCCCCTTTGAACTaGTTTCTGTTTGCATACTTG +
Preference number: 4 (lower is better)
Translates to: PREVVTWLCYARETKFSSHPPLN*FLFAYL
Trigger: CAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATG...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp GTACGCAGTAATAGAACCAGGAAAGAAAGCCCACAGAGAATCATGATGTGGAGGAACAACTTGTCCTTCTaGCGAAGGATTTTGTCATAC +
Preference number: 4 (lower is better)
Translates to: VRSNRTRKESPQRIMMWRNNLSF*RRILSY
Trigger: GTATGACAAAATCCTTCGTCAGAAGGACAAGTTGTT...CCTCCACATCATGATTCTCTGTGGGCTTTCTTTCCTGGTTCTATTACTGCGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS-3UTR TCA 90 bp TACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTTTGTACTTTACTCCTTaGCAGAGCTCTGGAGACATG +
Preference number: 4 (lower is better)
Translates to: YSLWLASFSAHNAYETITLYFTP*QSSGDM
Trigger: CATGTCTCCAGAGCTCTGTCAAGGAGTAAAGTACAA...AGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp TACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTTGGTCAAGGCACGAATaGACCATTTGGATCAATTCC +
Preference number: 4 (lower is better)
Translates to: YSLWLASFSAHNAYETITWSRHE*TIWINS
Trigger: GGAATTGATCCAAATGGTTCATTCGTGCCTTGACCA...AGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp TTAAATTTTACACAGATAGAGCTATATAGCATGTACTCTTTGTGGCTGGCTTCTTCTCCATGGCCCAGCTaGCCATGGAGTTTAGTGCCT +
Preference number: 4 (lower is better)
Translates to: LNFTQIELYSMYSLWLASSPWPS*PWSLVP
Trigger: AGGCACTAAACTCCATGGTCAGCTGGGCCATGGAGA...AGAAGCCAGCCACAAAGAGTACATGCTATATAGCTCTATCTGTGTAAAATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACGCTCCACTGGATTGCTaGGGAAGAAGTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: NKITPRSYLKGNATLQMYAPLDC*GRSSAA
Trigger: TGCAGCTGAACTTCTTCCTCAGCAATCCAGTGGAGC...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACGCTCCACTGGATTGCTaGGGAAGAAGTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHAPLDC*GRSSAA
Trigger: TGCAGCTGAACTTCTTCCTCAGCAATCCAGTGGAGC...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CAAGATATAGACCATTCCCATTACTCTAGGATCCCTTCCACCTCTTCTGTTAATATTCCCGACATGCACTaGTTCAGACCCAGCTTATTG +
Preference number: 4 (lower is better)
Translates to: QDIDHSHYSRIPSTSSVNIPDMH*FRPSLL
Trigger: CAATAAGCTGGGTCTGAATCAGTGCATGTCGGGAAT...ATTAACAGAAGAGGTGGAAGGGATCCTAGAGTAATGGGAATGGTCTATATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAACCCGGGCTAGAGCTCTaGAACACAGTTCCAATGGAT +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKPGLEL*NTVPMD
Trigger: ATCCATTGGAACTGTGTTTCAGAGCTCTAGCCCGGG...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGATCGGTAAGTGTGCTGTaGAGTTCTTTGGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRSVSVL*SSLGPS
Trigger: ACTGGGACCCAAAGAACTTCACAGCACACTTACCGA...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACCACTGTTACAGTTTATaGCAACCCCCGCAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHHCYSL*QPPQVP
Trigger: GGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTG...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACGAGGATACAGGGACATaGCAGGTCAATCGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: NKITPRSYLKGNATLQMYEDTGT*QVNRSS
Trigger: TGAGGACCGATTGACCTGTCATGTCCCTGTATCCTC...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TCGCTGGATGTTAGTAAGGTCATAGATCCGGGCCCTCCAGAGAGAACAAATTGTCTTTTAAATTTATCTTaGTCTGGTCTCTGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SLDVSKVIDPGPPERTNCLLNLS*SGLWEE
Trigger: CTCTTCCCAGAGACCAGATCAAGATAAATTTAAAAG...ACAATTTGTTCTCTCTGGAGGGCCCGGATCTATGACCTTACTAACATCCAGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR GCA 90 bp TACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTGTCGTGCTGCAGCAGTaGCAGAATAACAATCTCATT +
Preference number: 4 (lower is better)
Translates to: YSLWLASFSAHNAYETITVVLQQ*QNNNLI
Trigger: AATGAGATTGTTATTCTGGCACTGCTGCAGCACGAC...AGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR GCA 90 bp ATAGCATGTACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGAGCAATAATGTTGTCGTaGTGCAGCAGTGCCAGAATA +
Preference number: 4 (lower is better)
Translates to: IACTLCGWLLFLHTMPMRAIMLS*CSSARI
Trigger: TATTCTGGCACTGCTGCAGCACGACAACATTATTGC...TCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR GCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAGCAATAATGTTGTCGTaGTGCAGCAGTGCCAGAATA +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKAIMLS*CSSARI
Trigger: TATTCTGGCACTGCTGCAGCACGACAACATTATTGC...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCGCAATAATGTTGTCGTaGTGCAGCAGTGCCAGAATA +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCAIMLS*CSSARI
Trigger: TATTCTGGCACTGCTGCAGCACGACAACATTATTGC...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTAAAGTCAATGACGCAGCCAACTaGCCAGATATCAGACTTGAA +
Preference number: 4 (lower is better)
Translates to: LWLASFSAHNAYETITKVNDAAN*PDIRLE
Trigger: TTCAAGTCTGATATCTGGGCAGTTGGCTGCGTCATT...GACTTTAGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR GCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAAATGACGCAGCCAACTaGCCAGATATCAGACTTGAA +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKNDAAN*PDIRLE
Trigger: TTCAAGTCTGATATCTGGGCAGTTGGCTGCGTCATT...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CAAGATATAGACCATTCCCATTACTCTAGGATCCCTTCCACCTCTTCTGTTAATGTGCTTCAGTCACAGTaGTTGACCTTGGTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: QDIDHSHYSRIPSTSSVNVLQSQ*LTLVSL
Trigger: CAAAGAGACCAAGGTCAAGCACTGTGACTGAAGCAC...ATTAACAGAAGAGGTGGAAGGGATCCTAGAGTAATGGGAATGGTCTATATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR GCA 90 bp TTAAATTTTACACAGATAGAGCTATATAGCATGTACTCTTTGTGGCTGGCTTCTAAAGTGGGTATTCCCTaGACAGACCTGCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: LNFTQIELYSMYSLWLASKVGIP*TDLPGT
Trigger: AGTGCCCGGCAGGTCTGTGCAGGGAATACCCACTTT...AGAAGCCAGCCACAAAGAGTACATGCTATATAGCTCTATCTGTGTAAAATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR GCA 90 bp ATAGCATGTACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGAAGTTTAGTGCCTCCTTaGATGTTCACCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: IACTLCGWLLFLHTMPMRSLVPP*MFTQVY
Trigger: GTACACTTGGGTGAACATGCAAGGAGGCACTAAACT...TCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR GCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGAACGATGAGAATGGTATaGCATCCACGGCAAGACAGG +
Preference number: 4 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRTMRMV*HPRQDR
Trigger: CCTGTCTTGCCGTGGATGGCATACCATTCTCATCGT...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAACAATGGATAAGCCACTaGTATTGGAACGGATGGTCT +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKQWISH*YWNGWS
Trigger: AGACCATCCGTTCCAATAGCAGTGGCTTATCCATTG...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGATGCATCCCCACCTGCTaGCCTCCTTCTAATTTCTTG +
Preference number: 4 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRCIPTC*PPSNFL
Trigger: CAAGAAATTAGAAGGAGGGCAGCAGGTGGGGATGCA...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAATGCATCCCCACCTGCTaGCCTCCTTCTAATTTCTTG +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQCIPTC*PPSNFL
Trigger: CAAGAAATTAGAAGGAGGGCAGCAGGTGGGGATGCA...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTAATGTACAAGGAAAGTaGTTCAGAGCCTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: ASSFTPSPFELVSVCILVNVQGK*FRASAL
Trigger: CAAGGCAGAGGCTCTGAAGCACTTTCCTTGTACATT...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTACTATCTAAAAGGCAATaGCACTCTCCAAATGTACAA +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLLSKRQ*HSPNVQ
Trigger: TTGTACATTTGGAGAGTGGCATTGCCTTTTAGATAG...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TGGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTGAAGCACAGCAAGTCCCCAGAACTTaGAACTTTAATCAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: WMFYPQRLRSMHRLTEAQQVPRT*NFNQSL
Trigger: CAAACTTTGATTAAAGTTGCAAGTTCTGGGGACTTG...CTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp CAGCAACTTTGTCCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGACAAGTCCCCAGAACTTaGAACTTTAATCAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: QQLCPPPCSHNNLIRRHRQVPRT*NFNQSL
Trigger: CAAACTTTGATTAAAGTTGCAAGTTCTGGGGACTTG...TCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAGTTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR GCA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGCAAGTCCCCAGAACTTaGAACTTTAATCAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQQVPRT*NFNQSL
Trigger: CAAACTTTGATTAAAGTTGCAAGTTCTGGGGACTTG...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTACAAAGAATATTTCTGTaGAGATGTCCCTTGCATTGT +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLQRIFL*RCPLHC
Trigger: ACAATGCAAGGGACATCTGCACAGAAATATTCTTTG...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTGTTGTAACTTGGCTGTaGTATGCCAGGGAGACCAAA +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGVVTWL*YARETK
Trigger: TTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAAC...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTTGGAGACATGTAATATaGGGTTCCCACAAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGWRHVI*GSHKRL
Trigger: GAGACGCTTGTGGGAACCCCATATTACATGTCTCCA...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTTCCTTGACAGAGCTCTaGAGACATGTAATATGGGGT +
Preference number: 4 (lower is better)
Translates to: YSLWLASFSAHNAYETITSLTEL*RHVIWG
Trigger: ACCCCATATTACATGTCTCCAGAGCTCTGTCAAGGA...AGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCTCCTTGACAGAGCTCTaGAGACATGTAATATGGGGT +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCSLTEL*RHVIWG
Trigger: ACCCCATATTACATGTCTCCAGAGCTCTGTCAAGGA...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCAAATTCCAAAGAGTACTaGCTAGAGTCAACTTCCATG +
Preference number: 4 (lower is better)
Translates to: PREVVTWLCYARETKFSSNSKEY*LESTSM
Trigger: CATGGAAGTTGACTCTAGCCAGTACTCTTTGGAATT...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp TACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTATAACATCCAGTTTCTaGGGGGTGGATTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: YSLWLASFSAHNAYETITITSSF*GVDFPP
Trigger: TGGTGGAAAATCCACCCCCCAGAAACTGGATGTTAT...AGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAATAACATCCAGTTTCTaGGGGGTGGATTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKITSSF*GVDFPP
Trigger: TGGTGGAAAATCCACCCCCCAGAAACTGGATGTTAT...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AGAGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGATATCAGAGCCATGTaGTCTCTCTGTGGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: REAKNISVQMSLALFLFQDIRAM*SLCGGH
Trigger: ATGACCCCCACAGAGAGACCACATGGCTCTGATATC...TTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTATTTTACAAGGCTAGGTaGAAATACAAAGCTCACATC +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLFYKAR*KYKAHI
Trigger: GATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAACCAGTTTTGGAGAAATaGCAAAATTTCCATTGCACA +
Preference number: 4 (lower is better)
Translates to: GFSPSISLYATSFGEMAKPVLEK*QNFHCT
Trigger: TGTGCAATGGAAATTTTGCCATTTCTCCAAAACTGG...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CCCACAAGCGTCTCAGCCATGGAATACTCAGAATTAAGTTTCTTTGCTAGGCCAGTCTTTATATCTCTATaGAGGATTCCAGCTTTATGG +
Preference number: 4 (lower is better)
Translates to: PTSVSAMEYSELSFFARPVFISL*RIPALW
Trigger: CCATAAAGCTGGAATCCTTCATAGAGATATAAAGAC...TGGCCTAGCAAAGAAACTTAATTCTGAGTATTCCATGGCTGAGACGCTTGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554258.1
CDS-3UTR TCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTTGGTCAAGGCACGAATaGACCATTTGGATCAATTCC +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGWSRHE*TIWINS
Trigger: GGAATTGATCCAAATGGTTCATTCGTGCCTTGACCA...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTAAATTTTACACAGATAGAGCTATATAGCATGTACTCTTTGTGGCTGGCTTCTCTCTCCTGCGTTTCCTaGGAAGAGGGCGATCTAGAA +
Preference number: 4 (lower is better)
Translates to: LNFTQIELYSMYSLWLASLSCVS*EEGDLE
Trigger: TTCTAGATCGCCCTCTTCTCAGGAAACGCAGGAGAG...AGAAGCCAGCCACAAAGAGTACATGCTATATAGCTCTATCTGTGTAAAATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp CAAGATATAGACCATTCCCATTACTCTAGGATCCCTTCCACCTCTTCTGTTAATCAGTCACACAGACAGTaGAATCATCACCACATGACA +
Preference number: 4 (lower is better)
Translates to: QDIDHSHYSRIPSTSSVNQSHRQ*NHHHMT
Trigger: TGTCATGTGGTGATGATTTCACTGTCTGTGTGACTG...ATTAACAGAAGAGGTGGAAGGGATCCTAGAGTAATGGGAATGGTCTATATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp ATAGCATGTACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGAATAATAATCCTCTTCTaGATCCAAACCCAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: IACTLCGWLLFLHTMPMRIIILF*IQTQSS
Trigger: GGACGACTGGGTTTGGATTCAGAAGAGGATTATTAT...TCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAATAATAATCCTCTTCTaGATCCAAACCCAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKIIILF*IQTQSS
Trigger: GGACGACTGGGTTTGGATTCAGAAGAGGATTATTAT...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTAAAGTCCCATCACAGCCACATTaGACTGCAACAATAATCAAG +
Preference number: 4 (lower is better)
Translates to: LWLASFSAHNAYETITKVPSQPH*TATIIK
Trigger: CTTGATTATTGTTGCAGTTCAATGTGGCTGTGATGG...GACTTTAGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTCCATCACAGCCACATTaGACTGCAACAATAATCAAG +
Preference number: 4 (lower is better)
Translates to: ASSFTPSPFELVSVCILVPSQPH*TATIIK
Trigger: CTTGATTATTGTTGCAGTTCAATGTGGCTGTGATGG...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCCCATCACAGCCACATTaGACTGCAACAATAATCAAG +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCPSQPH*TATIIK
Trigger: CTTGATTATTGTTGCAGTTCAATGTGGCTGTGATGG...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGAATTCCCGACATGCACTaGTTCAGACCCAGCTTATTG +
Preference number: 4 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRIPDMH*FRPSLL
Trigger: CAATAAGCTGGGTCTGAATCAGTGCATGTCGGGAAT...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp AGAGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAACCCCAGGCAAAAATGTaGTTATCATCAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: REAKNISVQMSLALFLFQPQAKM*LSSVAA
Trigger: TGCTGCCACTGATGATAATCACATTTTTGCCTGGGG...TTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCATACTTTCTCAACGATaGGAATGGTATGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPILSQR*EWYAIH
Trigger: GTGGATGGCATACCATTCTCATCGTTGAGAAAGTAT...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAGATCATGAAGTCAAGTaGTCGAGACCATCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKDHEVK*SRPSWP
Trigger: TGGCCAGGATGGTCTCGATCACTTGACTTCATGATC...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR GCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCATAATGTTGTCGTGCTaGAGCAGTGCCAGAATAACA +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCIMLSC*SSARIT
Trigger: TGTTATTCTGGCACTGCTGCAGCACGACAACATTAT...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TGCCCAGATATCAGACTTGAAATTGTACTTTACTCCTTGACAGAGCTCTGGAGATTCCAGCTTTATGGATaGAGCTCACTGCTGAAACAA +
Preference number: 4 (lower is better)
Translates to: CPDIRLEIVLYSLTELWRFQLYG*SSLLKQ
Trigger: TTGTTTCAGCAGTGAGCTGCATCCATAAAGCTGGAA...TCTCCAGAGCTCTGTCAAGGAGTAAAGTACAATTTCAAGTCTGATATCTGGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554258.1
CDS-3UTR GCA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTTCCAGCTTTATGGATaGAGCTCACTGCTGAAACAA +
Preference number: 4 (lower is better)
Translates to: ASSFTPSPFELVSVCILVFQLYG*SSLLKQ
Trigger: TTGTTTCAGCAGTGAGCTGCATCCATAAAGCTGGAA...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCTTCCAGCTTTATGGATaGAGCTCACTGCTGAAACAA +
Preference number: 4 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPFQLYG*SSLLKQ
Trigger: TTGTTTCAGCAGTGAGCTGCATCCATAAAGCTGGAA...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACATGGCCCGAATTCCTTaGACGATCTTCACACACAGG +
Preference number: 4 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHMARIP*TIFTHR
Trigger: CCTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCAT...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp GCATACAACTTTGAAGTCAGGTTGTATACCTGTGAAGAAGTGGACAGAGACAAGCGGATAGCTTTGCCTTaGAACTTTTCCACATGCTTT +
Preference number: 4 (lower is better)
Translates to: AYNFEVRLYTCEEVDRDKRIALP*NFSTCF
Trigger: AAAGCATGTGGAAAAGTTGCAAGGCAAAGCTATCCG...CTTGTCTCTGTCCACTTCTTCACAGGTATACAACCTGACTTCAAAGTTGTATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
CDS-3UTR GCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAAGGCCATTACCACCATTaGCCCAGGCAAAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQGHYHH*PRQKCD
Trigger: ATCACATTTTTGCCTGGGGCAATGGTGGTAATGGCC...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACACGATGAGAATGGTATaGCATCCACGGCAAGACAGG +
Preference number: 4 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHTMRMV*HPRQDR
Trigger: CCTGTCTTGCCGTGGATGGCATACCATTCTCATCGT...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAATTCCATTCCTCGGTCTaGTTCCATTGTTCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQFHSSV*FHCSSE
Trigger: TTCCGAGGAACAATGGAAGCAGACCGAGGAATGGAA...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAACATGGGGATAAATTCTaGATTTTCCAGCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKHGDKF*IFQLLS
Trigger: CGAAAGGAGCTGGAAAATGCAGAATTTATCCCCATG...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAATTCCATCTCTTCCTTTaGTGTCTGAGTTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKFHLFL*CLSSFG
Trigger: TCCAAAGGAACTCAGACAGCAAAGGAAGAGATGGAA...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAGATGAGGTACAGAGCTaGTGTTGCTATGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKDEVQS*CCYGSH
Trigger: GTGACTGCCATAGCAACAGCAGCTCTGTACCTCATC...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTGATTATAGCCCACTCTaGCCTGACCATCATGAATAC +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGDYSPL*PDHHEY
Trigger: GTATTCATGATGGTCAGGGCAGAGTGGGCTATAATC...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTATAACATCCAGTTTCTaGGGGGTGGATTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGITSSF*GVDFPP
Trigger: TGGTGGAAAATCCACCCCCCAGAAACTGGATGTTAT...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CAAGATATAGACCATTCCCATTACTCTAGGATCCCTTCCACCTCTTCTGTTAATCTTTTCCACATGCTTTaGCTGTCGATAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: QDIDHSHYSRIPSTSSVNLFHML*LSIGGF
Trigger: AAAGCCTCCTATCGACAGCCAAAGCATGTGGAAAAG...ATTAACAGAAGAGGTGGAAGGGATCCTAGAGTAATGGGAATGGTCTATATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACAGAAGTTCAGCTGCATaGGTTCTAGCACTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: NKITPRSYLKGNATLQMYRSSAA*VLALQG
Trigger: GCCCTGAAGTGCTAGAACCCATGCAGCTGAACTTCT...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAAACATCCACCTTTTGTaGTGTATAATAATCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PTVTVYDNPRKSPELATLNIHLL*CIIILF
Trigger: GAAGAGGATTATTATACACCACAAAAGGTGGATGTT...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGAAGCACTTTGCCTGACTaGGTCAACAGAAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRSTLPD*VNRNVP
Trigger: TGGGACATTTCTGTTGACCCAGTCAGGCAAAGTGCT...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAAAGCACTTTGCCTGACTaGGTCAACAGAAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQSTLPD*VNRNVP
Trigger: TGGGACATTTCTGTTGACCCAGTCAGGCAAAGTGCT...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCGAAACACAGTTCCAATaGATAAGCCACTGCTATTGG +
Preference number: 4 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPETQFQ*ISHCYW
Trigger: CCAATAGCAGTGGCTTATCCATTGGAACTGTGTTTC...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAATCGGAAGCCTCCACTTaGGTCAGGAGTTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKSEAST*VRSFRF
Trigger: GAATCTGAAACTCCTGACCCAAGTGGAGGCTTCCGA...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAATCAGACATATTTTCCTaGACTCAGGGCTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQSDIFS*TQGSQE
Trigger: CTCTTGGGAGCCCTGAGTCCAGGAAAATATGTCTGA...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACAATCCCACCCTGCATTaGTCACAGCCTGAAACACCA +
Preference number: 4 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHNPTLH*SQPETP
Trigger: TGGTGTTTCAGGCTGTGACCAATGCAGGGTGGGATT...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AGAGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGTCCCAGGCACAATATaGGAAAGTGCAAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: REAKNISVQMSLALFLFQVPGTI*ESANCL
Trigger: GAGACAGTTTGCACTTTCCCATATTGTGCCTGGGAC...TTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTAAAAACTGGAAGTTCTaGAAACACTGGGCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGKNWKF*KHWASN
Trigger: GTTGCTGGCCCAGTGTTTCCAGAACTTCCAGTTTTT...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR CCA 90 bp TTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTAAAGTCAGGACACTCACTTCATaGTTGATAATTCCCGACATG +
Preference number: 4 (lower is better)
Translates to: LWLASFSAHNAYETITKVRTLTS*LIIPDM
Trigger: CATGTCGGGAATTATCAACCATGAAGTGAGTGTCCT...GACTTTAGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CCA 90 bp TTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTAAAGTCTGTACTCTTTGTGGCTaGCTTCTTTTTCTGCACACA +
Preference number: 4 (lower is better)
Translates to: LWLASFSAHNAYETITKVCTLCG*LLFLHT
Trigger: TGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACA...GACTTTAGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553823.6
3UTR CAA 72 bp ATGATGGGTTTAGATGCATACAACTTTGAAGTCAGGTaGTATACCTGTGAAGAAGTGGACAGAGACAAGGCT +
Preference number: 4 (lower is better)
Translates to: MMGLDAYNFEVR*YTCEEVDRDKA
Trigger: AGCCTTGTCTCTGTCCACTTCTTCACAGGTATACAACCTGACTTCAAAGTTGTATGCATCTAAACCCATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
CDS-3UTR TCA 90 bp TACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTAACAACTTGTCCTTCTaGCGAAGGATTTTGTCATAC +
Preference number: 4 (lower is better)
Translates to: YSLWLASFSAHNAYETITNNLSF*RRILSY
Trigger: GTATGACAAAATCCTTCGTCAGAAGGACAAGTTGTT...AGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp TTTCATTATCAATTTATCACTCTCCACAGCTACACAGGTGGTAACAGAGATGTGTTGTACTTTACTCCTTaGCAGAGCTCTGGAGACATG +
Preference number: 4 (lower is better)
Translates to: FHYQFITLHSYTGGNRDVLYFTP*QSSGDM
Trigger: CATGTCTCCAGAGCTCTGTCAAGGAGTAAAGTACAA...CACATCTCTGTTACCACCTGTGTAGCTGTGGAGAGTGATAAATTGATAATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR TCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGATTGTACTTTACTCCTTaGCAGAGCTCTGGAGACATG +
Preference number: 4 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRLYFTP*QSSGDM
Trigger: CATGTCTCCAGAGCTCTGTCAAGGAGTAAAGTACAA...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACATTCCCGACATGCACTaGTTCAGACCCAGCTTATTG +
Preference number: 4 (lower is better)
Translates to: NKITPRSYLKGNATLQMYIPDMH*FRPSLL
Trigger: CAATAAGCTGGGTCTGAATCAGTGCATGTCGGGAAT...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAGTTTCAGATTCCTGCTaGCTGTCCTCTTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKVSDSC*LSSSSP
Trigger: TGGTGAAGAAGAGGACAGTCAGCAGGAATCTGAAAC...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp AGAGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAATCTTCCTTTGCTGTCTaGGTTCCTTTGGAATGCATC +
Preference number: 4 (lower is better)
Translates to: REAKNISVQMSLALFLFQSSFAV*VPLECI
Trigger: GATGCATTCCAAAGGAACTCAGACAGCAAAGGAAGA...TTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGAGCTGCACAGAGTAACTaGACTTTTTCGAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRAAQSN*TFSKQA
Trigger: GGCTTGTTTCGAAAAAGTTCAGTTACTCTGTGCAGC...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCTGCTTTAAACTTCAGTaGAATGCTCAGCCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPCFKLQ*NAQPRE
Trigger: TTCTCTTGGCTGAGCATTTCACTGAAGTTTAAAGCA...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp CAAGATATAGACCATTCCCATTACTCTAGGATCCCTTCCACCTCTTCTGTTAATATAATGTTGTCGTGCTaGAGCAGTGCCAGAATAACA +
Preference number: 4 (lower is better)
Translates to: QDIDHSHYSRIPSTSSVNIMLSC*SSARIT
Trigger: TGTTATTCTGGCACTGCTGCAGCACGACAACATTAT...ATTAACAGAAGAGGTGGAAGGGATCCTAGAGTAATGGGAATGGTCTATATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR GCA 90 bp CAAGATATAGACCATTCCCATTACTCTAGGATCCCTTCCACCTCTTCTGTTAATTTCCAGCTTTATGGATaGAGCTCACTGCTGAAACAA +
Preference number: 4 (lower is better)
Translates to: QDIDHSHYSRIPSTSSVNFQLYG*SSLLKQ
Trigger: TTGTTTCAGCAGTGAGCTGCATCCATAAAGCTGGAA...ATTAACAGAAGAGGTGGAAGGGATCCTAGAGTAATGGGAATGGTCTATATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR GCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAAAATGACGCAGCCAACTaGCCAGATATCAGACTTGAA +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQNDAAN*PDIRLE
Trigger: TTCAAGTCTGATATCTGGGCAGTTGGCTGCGTCATT...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp AGACTTGAAATTGTACTTTACTCCTTGACAGAGCTCTGGAGACATGTAATATGGAATGACGCAGCCAACTaGCCAGATATCAGACTTGAA +
Preference number: 4 (lower is better)
Translates to: RLEIVLYSLTELWRHVIWNDAAN*PDIRLE
Trigger: TTCAAGTCTGATATCTGGGCAGTTGGCTGCGTCATT...CCATATTACATGTCTCCAGAGCTCTGTCAAGGAGTAAAGTACAATTTCAAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554258.1
CDS-3UTR GCA 90 bp TTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTAAAGTCTGGTCTCTTTGTAGGTaGATTAAGCAGAGTGACTTT +
Preference number: 4 (lower is better)
Translates to: LWLASFSAHNAYETITKVWSLCR*IKQSDF
Trigger: AAAGTCACTCTGCTTAATGCACCTACAAAGAGACCA...GACTTTAGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR GCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACGGCCATTACCACCATTaGCCCAGGCAAAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: NKITPRSYLKGNATLQMYGHYHH*PRQKCD
Trigger: ATCACATTTTTGCCTGGGGCAATGGTGGTAATGGCC...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACGGCCATTACCACCATTaGCCCAGGCAAAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHGHYHH*PRQKCD
Trigger: ATCACATTTTTGCCTGGGGCAATGGTGGTAATGGCC...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACTTCCATTCCTCGGTCTaGTTCCATTGTTCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHFHSSV*FHCSSE
Trigger: TTCCGAGGAACAATGGAAGCAGACCGAGGAATGGAA...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTCATGGGGATAAATTCTaGATTTTCCAGCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGHGDKF*IFQLLS
Trigger: CGAAAGGAGCTGGAAAATGCAGAATTTATCCCCATG...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAGAACTGGTTTCTGTTTaGATACTTGTTTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKELVSV*ILVWWE
Trigger: TTCCCACCAAACAAGTATGCAAACAGAAACCAGTTC...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAAACTTGGCTGTGCTATaGCAGGGAGACCAAATTCAG +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKNLAVL*QGDQIQ
Trigger: CTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTT...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp AGACTTGAAATTGTACTTTACTCCTTGACAGAGCTCTGGAGACATGTAATATGGTCCTTGACAGAGCTCTaGAGACATGTAATATGGGGT +
Preference number: 4 (lower is better)
Translates to: RLEIVLYSLTELWRHVIWSLTEL*RHVIWG
Trigger: ACCCCATATTACATGTCTCCAGAGCTCTGTCAAGGA...CCATATTACATGTCTCCAGAGCTCTGTCAAGGAGTAAAGTACAATTTCAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554258.1
CDS-3UTR CCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAAATTCCAAAGAGTACTaGCTAGAGTCAACTTCCATG +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKNSKEY*LESTSM
Trigger: CATGGAAGTTGACTCTAGCCAGTACTCTTTGGAATT...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTGAAACACAGTTCCAATaGATAAGCCACTGCTATTGG +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGETQFQ*ISHCYW
Trigger: CCAATAGCAGTGGCTTATCCATTGGAACTGTGTTTC...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCAGTTGGGTAAAAATCTaGAGGTTTTCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCSWVKI*RFSCCS
Trigger: GCTACAGCAAGAAAACCTCCAGATTTTTACCCAACT...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAAGTTGGGTAAAAATCTaGAGGTTTTCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKSWVKI*RFSCCS
Trigger: GCTACAGCAAGAAAACCTCCAGATTTTTACCCAACT...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCGGTGAAAATGATACATaGGATATAAGCTGCTACCAG +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCGENDT*DISCYQ
Trigger: CTGGTAGCAGCTTATATCCCATGTATCATTTTCACC...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTCATTCAGAAAGAAAGTaGTTGGGGCTGCTGATATCA +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGHSERK*LGLLIS
Trigger: TGATATCAGCAGCCCCAACCACTTTCTTTCTGAATG...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACGTCCCAGGCACAATATaGGAAAGTGCAAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHVPGTI*ESANCL
Trigger: GAGACAGTTTGCACTTTCCCATATTGTGCCTGGGAC...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCATTACAAACCATAAACTaGCATTATCACTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PREVVTWLCYARETKFSSLQTIN*HYHLER
Trigger: CCTTTCCAAGTGATAATGCCAGTTTATGGTTTGTAA...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp ATAGCATGTACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCCAGATATCAGACTTaGAATTGTACTTTACTCCTT +
Preference number: 4 (lower is better)
Translates to: IACTLCGWLLFLHTMPMRPRYQT*NCTLLL
Trigger: AAGGAGTAAAGTACAATTTCAAGTCTGATATCTGGG...TCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTCCCAGATATCAGACTTaGAATTGTACTTTACTCCTT +
Preference number: 4 (lower is better)
Translates to: ASSFTPSPFELVSVCILVPRYQT*NCTLLL
Trigger: AAGGAGTAAAGTACAATTTCAAGTCTGATATCTGGG...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACGCTGCACAGAGTAACTaGACTTTTTCGAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHAAQSN*TFSKQA
Trigger: GGCTTGTTTCGAAAAAGTTCAGTTACTCTGTGCAGC...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAAGTTGCATTTACATGCTaGACCAAAACCCACTGTTAC +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQVAFTC*TKTHCY
Trigger: GTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAAC...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACTACTCCATCCCCCTTTaGACTGGTTTCTGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: NKITPRSYLKGNATLQMYYSIPL*TGFCLH
Trigger: ATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTA...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACTACTCCATCCCCCTTTaGACTGGTTTCTGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHYSIPL*TGFCLH
Trigger: ATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTA...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAGTCGTGCTGCAGCAGTaGCAGAATAACAATCTCATT +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKVVLQQ*QNNNLI
Trigger: AATGAGATTGTTATTCTGGCACTGCTGCAGCACGAC...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGATGGCAAAATTTCCATTaGACAAGACCTCCCACAATG +
Preference number: 4 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRWQNFH*TRPPTM
Trigger: CATTGTGGGAGGTCTTGTGCAATGGAAATTTTGCCA...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp AGAGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAATGTGCAGATGTCCCTTaGATTGTTTCTGTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: REAKNISVQMSLALFLFQCADVP*IVSVPR
Trigger: TCTTGGAACAGAAACAATGCAAGGGACATCTGCACA...TTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAATGTGCAGATGTCCCTTaGATTGTTTCTGTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQCADVP*IVSVPR
Trigger: TCTTGGAACAGAAACAATGCAAGGGACATCTGCACA...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAATCCTTGACAGAGCTCTaGAGACATGTAATATGGGGT +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKSLTEL*RHVIWG
Trigger: ACCCCATATTACATGTCTCCAGAGCTCTGTCAAGGA...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CAAGATATAGACCATTCCCATTACTCTAGGATCCCTTCCACCTCTTCTGTTAATAATTCCAAAGAGTACTaGCTAGAGTCAACTTCCATG +
Preference number: 4 (lower is better)
Translates to: QDIDHSHYSRIPSTSSVNNSKEY*LESTSM
Trigger: CATGGAAGTTGACTCTAGCCAGTACTCTTTGGAATT...ATTAACAGAAGAGGTGGAAGGGATCCTAGAGTAATGGGAATGGTCTATATCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CCA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCAAACATAGACTTCACTaGTTCGTGATGTTACTACAG +
Preference number: 4 (lower is better)
Translates to: FPRQLPINGENDTWDISCKHRLH*FVMLLQ
Trigger: CTGTAGTAACATCACGAACCAGTGAAGTCTATGTTT...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAACTTTTCCACATGCTTTaGCTGTCGATAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKLFHML*LSIGGF
Trigger: AAAGCCTCCTATCGACAGCCAAAGCATGTGGAAAAG...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGAGAAACACAGTTCCAATaGATAAGCCACTGCTATTGG +
Preference number: 4 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRETQFQ*ISHCYW
Trigger: CCAATAGCAGTGGCTTATCCATTGGAACTGTGTTTC...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp AGAATTCAATACTTTCTCAACGATGAGAATGGTATGCCATCCACGGCAAGACAGTTCAACTTCTGCAGTTaGGTAAAAATCTGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: RIQYFLNDENGMPSTARQFNFCS*VKIWRF
Trigger: AAACCTCCAGATTTTTACCCAACTGCAGAAGTTGAA...CTGTCTTGCCGTGGATGGCATACCATTCTCATCGTTGAGAAAGTATTGAATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAATTCAACTTCTGCAGTTaGGTAAAAATCTGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKFNFCS*VKIWRF
Trigger: AAACCTCCAGATTTTTACCCAACTGCAGAAGTTGAA...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACTCTCCTCTTCAAAGGTaGGATCAACAGATGAGGTAC +
Preference number: 4 (lower is better)
Translates to: NKITPRSYLKGNATLQMYSPLQR*DQQMRY
Trigger: GTACCTCATCTGTTGATCCCACCTTTGAAGAGGAGA...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAATTTTACAAGGCTAGGTaGAAATACAAAGCTCACATC +
Preference number: 4 (lower is better)
Translates to: PALSLFLTEEISINPQRKFYKAR*KYKAHI
Trigger: GATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp AGACTTGAAATTGTACTTTACTCCTTGACAGAGCTCTGGAGACATGTAATATGGAACAACTTGTCCTTCTaGCGAAGGATTTTGTCATAC +
Preference number: 4 (lower is better)
Translates to: RLEIVLYSLTELWRHVIWNNLSF*RRILSY
Trigger: GTATGACAAAATCCTTCGTCAGAAGGACAAGTTGTT...CCATATTACATGTCTCCAGAGCTCTGTCAAGGAGTAAAGTACAATTTCAAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554258.1
CDS-3UTR TCA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGAAACAACTTGTCCTTCTaGCGAAGGATTTTGTCATAC +
Preference number: 4 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRNNLSF*RRILSY
Trigger: GTATGACAAAATCCTTCGTCAGAAGGACAAGTTGTT...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp GTTTCTTTGCTAGGCCATAATCTCCAAGTTTTATCAGGTTTGCCTTGGTCAGAACCCAGATATCAGACTTaGAATTGTACTTTACTCCTT +
Preference number: 4 (lower is better)
Translates to: VSLLGHNLQVLSGLPWSEPRYQT*NCTLLL
Trigger: AAGGAGTAAAGTACAATTTCAAGTCTGATATCTGGG...TTCTGACCAAGGCAAACCTGATAAAACTTGGAGATTATGGCCTAGCAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554258.1
CDS-3UTR TCA 90 bp TTAAATTTTACACAGATAGAGCTATATAGCATGTACTCTTTGTGGCTGGCTTCTGAAATCATCACCACATaGCACCTGACGGATAGCTTT +
Preference number: 4 (lower is better)
Translates to: LNFTQIELYSMYSLWLASEIITT*HLTDSF
Trigger: AAAGCTATCCGTCAGGTGTCATGTGGTGATGATTTC...AGAAGCCAGCCACAAAGAGTACATGCTATATAGCTCTATCTGTGTAAAATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAACCATCACAGCCACATTaGACTGCAACAATAATCAAG +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKPSQPH*TATIIK
Trigger: CTTGATTATTGTTGCAGTTCAATGTGGCTGTGATGG...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAATACTTTCTCAACGATaGGAATGGTATGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKILSQR*EWYAIH
Trigger: GTGGATGGCATACCATTCTCATCGTTGAGAAAGTAT...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTAAACAAGCCCTAGATTaGCTCCATCAGACATATTTT +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGKQALD*LHQTYF
Trigger: AAAATATGTCTGATGGAGTCAATCTAGGGCTTGTTT...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTACCTCTTCTCCTTCATaGTTTTCTCTTAAGGCTATT +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGTSSPS*FSLKAI
Trigger: AATAGCCTTAAGAGAAAATCATGAAGGAGAAGAGGT...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAACAAACCCAGTCGTCCTaGAACACACATAAGAATGAA +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKQTQSS*NTHKNE
Trigger: TTCATTCTTATGTGTGTTTCAGGACGACTGGGTTTG...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR GCA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTTTCTTGTTCAACTTCTaGAGTTGGGTAAAAATCTGG +
Preference number: 4 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGFLFNF*SWVKIW
Trigger: CCAGATTTTTACCCAACTGCAGAAGTTGAACAAGAA...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAAGAACTGGTTTCTGTTTaGATACTTGTTTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQELVSV*ILVWWE
Trigger: TTCCCACCAAACAAGTATGCAAACAGAAACCAGTTC...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCTTCATTAAAAATGTATaGAGATGTGCCGAGACAGTA +
Preference number: 4 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPFIKNV*RCAETV
Trigger: TACTGTCTCGGCACATCTGCATACATTTTTAATGAA...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR CCA 90 bp CAAGATATAGACCATTCCCATTACTCTAGGATCCCTTCCACCTCTTCTGTTAATAAACATAGACTTCACTaGTTCGTGATGTTACTACAG +
Preference number: 4 (lower is better)
Translates to: QDIDHSHYSRIPSTSSVNKHRLH*FVMLLQ
Trigger: CTGTAGTAACATCACGAACCAGTGAAGTCTATGTTT...ATTAACAGAAGAGGTGGAAGGGATCCTAGAGTAATGGGAATGGTCTATATCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CCA 90 bp ATAGCATGTACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGAAACATCCACCTTTTGTaGTGTATAATAATCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IACTLCGWLLFLHTMPMRNIHLL*CIIILF
Trigger: GAAGAGGATTATTATACACCACAAAAGGTGGATGTT...TCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACCATCCCCCTTTGAACTaGTTTCTGTTTGCATACTTG +
Preference number: 4 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHHPPLN*FLFAYL
Trigger: CAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATG...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
3UTR CAA 72 bp TATGCCACCAGTTTTGGAGAAATGGCAAAATTTCCATaGCACAAGACCTCCCACAATGTTGATAAGATTATC +
Preference number: 4 (lower is better)
Translates to: YATSFGEMAKFP*HKTSHNVDKII
Trigger: GATAATCTTATCAACATTGTGGGAGGTCTTGTGCAATGGAAATTTTGCCATTTCTCCAAAACTGGTGGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAAACAACTTGTCCTTCTaGCGAAGGATTTTGTCATAC +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKNNLSF*RRILSY
Trigger: GTATGACAAAATCCTTCGTCAGAAGGACAAGTTGTT...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp AGAGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGTCTTTATATCTCTATaGAGGATTCCAGCTTTATGG +
Preference number: 4 (lower is better)
Translates to: REAKNISVQMSLALFLFQVFISL*RIPALW
Trigger: CCATAAAGCTGGAATCCTTCATAGAGATATAAAGAC...TTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAATGGTCTCTTTGTAGGTaGATTAAGCAGAGTGACTTT +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKWSLCR*IKQSDF
Trigger: AAAGTCACTCTGCTTAATGCACCTACAAAGAGACCA...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TTAAATTTTACACAGATAGAGCTATATAGCATGTACTCTTTGTGGCTGGCTTCTCGGATAGCTTTGCCTTaGAACTTTTCCACATGCTTT +
Preference number: 4 (lower is better)
Translates to: LNFTQIELYSMYSLWLASRIALP*NFSTCF
Trigger: AAAGCATGTGGAAAAGTTGCAAGGCAAAGCTATCCG...AGAAGCCAGCCACAAAGAGTACATGCTATATAGCTCTATCTGTGTAAAATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR GCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACGGGAACTTCATGGTATaGTTCATGGTTGATAATTCC +
Preference number: 4 (lower is better)
Translates to: NKITPRSYLKGNATLQMYGNFMV*FMVDNS
Trigger: GGAATTATCAACCATGAAGCATACCATGAAGTTCCC...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp AGAGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAACTATCTAAAAGGCAATaGCACTCTCCAAATGTACAA +
Preference number: 4 (lower is better)
Translates to: REAKNISVQMSLALFLFQLSKRQ*HSPNVQ
Trigger: TTGTACATTTGGAGAGTGGCATTGCCTTTTAGATAG...TTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR GCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAACTATCTAAAAGGCAATaGCACTCTCCAAATGTACAA +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQLSKRQ*HSPNVQ
Trigger: TTGTACATTTGGAGAGTGGCATTGCCTTTTAGATAG...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp TTTCATTATCAATTTATCACTCTCCACAGCTACACAGGTGGTAACAGAGATGTGCAAAGAATATTTCTGTaGAGATGTCCCTTGCATTGT +
Preference number: 4 (lower is better)
Translates to: FHYQFITLHSYTGGNRDVQRIFL*RCPLHC
Trigger: ACAATGCAAGGGACATCTGCACAGAAATATTCTTTG...CACATCTCTGTTACCACCTGTGTAGCTGTGGAGAGTGATAAATTGATAATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR CCA 90 bp TTAAATTTTACACAGATAGAGCTATATAGCATGTACTCTTTGTGGCTGGCTTCTCACACACAGGTTAAGTaGGTTTGTAGCATCAAACGT +
Preference number: 4 (lower is better)
Translates to: LNFTQIELYSMYSLWLASHTQVK*VCSIKR
Trigger: ACGTTTGATGCTACAAACCCACTTAACCTGTGTGTG...AGAAGCCAGCCACAAAGAGTACATGCTATATAGCTCTATCTGTGTAAAATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAATTCAACTTCTGCAGTTaGGTAAAAATCTGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQFNFCS*VKIWRF
Trigger: AAACCTCCAGATTTTTACCCAACTGCAGAAGTTGAA...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp TTAAATTTTACACAGATAGAGCTATATAGCATGTACTCTTTGTGGCTGGCTTCTAGCATGTACTCTTTGTaGCTGGCTTCTTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LNFTQIELYSMYSLWLASSMYSL*LASFSA
Trigger: TGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCT...AGAAGCCAGCCACAAAGAGTACATGCTATATAGCTCTATCTGTGTAAAATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553823.6
3UTR CAA 72 bp AATTTTACACAGATAGAGCTATATAGCATGTACTCTTaGTGGCTGGCTTCTTTTTCTGCACACAATGCCTAT +
Preference number: 4 (lower is better)
Translates to: NFTQIELYSMYS*WLASFSAHNAY
Trigger: ATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTATATAGCTCTATCTGTGTAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR TCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACGTCTTTATATCTCTATaGAGGATTCCAGCTTTATGG +
Preference number: 4 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHVFISL*RIPALW
Trigger: CCATAAAGCTGGAATCCTTCATAGAGATATAAAGAC...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR TCA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAACCCAGATATCAGACTTaGAATTGTACTTTACTCCTT +
Preference number: 4 (lower is better)
Translates to: FYKARWKYKAHILKETIKPRYQT*NCTLLL
Trigger: AAGGAGTAAAGTACAATTTCAAGTCTGATATCTGGG...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR GCA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACTTCTTGTTCAACTTCTaGAGTTGGGTAAAAATCTGG +
Preference number: 4 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHFLFNF*SWVKIW
Trigger: CCAGATTTTTACCCAACTGCAGAAGTTGAACAAGAA...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAATCATTCGTTACCACATaGCTTCATAAAACACCAAAA +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQSFVTT*LHKTPK
Trigger: TTTTGGTGTTTTATGAAGCCATGTGGTAACGAATGA...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AGAGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAATCATTCGTTACCACATaGCTTCATAAAACACCAAAA +
Preference number: 4 (lower is better)
Translates to: REAKNISVQMSLALFLFQSFVTT*LHKTPK
Trigger: TTTTGGTGTTTTATGAAGCCATGTGGTAACGAATGA...TTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACCCAGTTTTGGAGAAATaGCAAAATTTCCATTGCACA +
Preference number: 4 (lower is better)
Translates to: NKITPRSYLKGNATLQMYPVLEK*QNFHCT
Trigger: TGTGCAATGGAAATTTTGCCATTTCTCCAAAACTGG...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CCA 90 bp AGAGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAATTACAAACCATAAACTaGCATTATCACTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: REAKNISVQMSLALFLFQLQTIN*HYHLER
Trigger: CCTTTCCAAGTGATAATGCCAGTTTATGGTTTGTAA...TTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CCA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAATTACAAACCATAAACTaGCATTATCACTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQLQTIN*HYHLER
Trigger: CCTTTCCAAGTGATAATGCCAGTTTATGGTTTGTAA...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR TCA 90 bp TTAAATTTTACACAGATAGAGCTATATAGCATGTACTCTTTGTGGCTGGCTTCTGTCTTTATATCTCTATaGAGGATTCCAGCTTTATGG +
Preference number: 4 (lower is better)
Translates to: LNFTQIELYSMYSLWLASVFISL*RIPALW
Trigger: CCATAAAGCTGGAATCCTTCATAGAGATATAAAGAC...AGAAGCCAGCCACAAAGAGTACATGCTATATAGCTCTATCTGTGTAAAATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR GCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACATGACAGTAAATGCATaGTGCTTCTTAATGTCTGTA +
Preference number: 4 (lower is better)
Translates to: NKITPRSYLKGNATLQMYMTVNA*CFLMSV
Trigger: TACAGACATTAAGAAGCAGCATGCATTTACTGTCAT...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR CCA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACAACATCCACCTTTTGTaGTGTATAATAATCCTCTTC +
Preference number: 4 (lower is better)
Translates to: NKITPRSYLKGNATLQMYNIHLL*CIIILF
Trigger: GAAGAGGATTATTATACACCACAAAAGGTGGATGTT...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS CCA 90 bp GCGGCCGCGGGCCTTGGGGACCAGCCTGCGTATGCCCGGAGGCCCTaGCCGCGCTGCGTCCCGCTCGCTTCAGATGCCGGCCCGCGGATC +
Preference number: 5 (lower is better)
Translates to: AAAGLGDQPAYARRP*PRCVPLASDAGPRI
Trigger: GATCCGCGGGCCGGCATCTGAAGCGAGCGGGACGCAGCGCGGCCAGGGCCTCCGGGCATACGCAGGCTGGTCCCCAAGGCCCGCGGCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000238616.10
ENST00000553945.1
ENST00000556170.5
ENST00000557673.6
ENST00000677411.1
ENST00000678531.1
CDS GCA 90 bp GGCCTTGGGGACCAGCCTGCGTATGCCCGGAGGCCCTGGCCGCGCTaGGTCCCGCTCGCTTCAGATGCCGGCCCGCGGATCCGTCAGCCC +
Preference number: 5 (lower is better)
Translates to: GLGDQPAYARRPWPR*VPLASDAGPRIRQP
Trigger: GGGCTGACGGATCCGCGGGCCGGCATCTGAAGCGAGCGGGACGCAGCGCGGCCAGGGCCTCCGGGCATACGCAGGCTGGTCCCCAAGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000238616.10
ENST00000553945.1
ENST00000556170.5
ENST00000557673.6
ENST00000677411.1
ENST00000678531.1
CDS GCA 90 bp CACCGACATGGCGGCGGCCGCGGGCCTTGGGGACCAGCCTGCGTATaGCCGGAGGCCCTGGCCGCGCTGCGTCCCGCTCGCTTCAGATGC +
Preference number: 5 (lower is better)
Translates to: HRHGGGRGPWGPACV*PEALAALRPARFRC
Trigger: GCATCTGAAGCGAGCGGGACGCAGCGCGGCCAGGGCCTCCGGGCATACGCAGGCTGGTCCCCAAGGCCCGCGGCCGCCGCCATGTCGGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000238616.10
ENST00000553945.1
ENST00000556170.5
ENST00000557673.6
ENST00000677411.1
ENST00000678531.1
CDS CCA 90 bp TCGCTCGTACTCGCCCAGCACCGACATGGCGGCGGCCGCGGGCCTTaGGGACCAGCCTGCGTATGCCCGGAGGCCCTGGCCGCGCTGCGT +
Preference number: 5 (lower is better)
Translates to: SLVLAQHRHGGGRGP*GPACVCPEALAALR
Trigger: ACGCAGCGCGGCCAGGGCCTCCGGGCATACGCAGGCTGGTCCCCAAGGCCCGCGGCCGCCGCCATGTCGGTGCTGGGCGAGTACGAGCGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000553945.1
ENST00000556170.5
ENST00000557673.6
ENST00000677411.1
CDS CCA 90 bp GTGAGTCATCTCGCCCAGCACCGACATGGCGGCGGCCGCGGGCCTTaGGGACCAGCCTGCGTATGCCCGGAGGCCCTGGCCGCGCTGCGT +
Preference number: 5 (lower is better)
Translates to: VSHLAQHRHGGGRGP*GPACVCPEALAALR
Trigger: ACGCAGCGCGGCCAGGGCCTCCGGGCATACGCAGGCTGGTCCCCAAGGCCCGCGGCCGCCGCCATGTCGGTGCTGGGCGAGATGACTCAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678531.1
CDS GCA 90 bp GTATGCCCGGAGGCCCTGGCCGCGCTGCGTCCCGCTCGCTTCAGATaGCGGCCCGCGGATCCGTCAGCCCAGCAACCCCGCGAAGCTCGA +
Preference number: 5 (lower is better)
Translates to: VCPEALAALRPARFR*RPADPSAQQPREAR
Trigger: TCGAGCTTCGCGGGGTTGCTGGGCTGACGGATCCGCGGGCCGGCATCTGAAGCGAGCGGGACGCAGCGCGGCCAGGGCCTCCGGGCATAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000553945.1
ENST00000556170.5
ENST00000677411.1
CDS-3UTR CAA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGCGGCGGCCGCGGGCCTaGGGGACCAGCCTGCGTATG +
Preference number: 5 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMRRPRA*GTSLRM
Trigger: CATACGCAGGCTGGTCCCCAAGGCCCGCGGCCGCCG...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS TCA 90 bp AGTCTAGCGGCCAAGGCTTCCCGCTTTCGGGGAAGGCCTGCAAAGTaGGGCCTCGGGCTAGGGTTGGCGGGCGCGTGGTGGGAACCGCGT +
Preference number: 5 (lower is better)
Translates to: SLAAKASRFRGRPAK*GLGLGLAGAWWEPR
Trigger: ACGCGGTTCCCACCACGCGCCCGCCAACCCTAGCCCGAGGCCTCACTTTGCAGGCCTTCCCCGAAAGCGGGAAGCCTTGGCCGCTAGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS CCA 90 bp GTGAGGCCTCGGGCTAGGGTTGGCGGGCGCGTGGTGGGAACCGCGTaGAACCGAAGGGCTCCCACGGGAACAAGGGCATCACTGACGGTA +
Preference number: 5 (lower is better)
Translates to: VRPRARVGGRVVGTA*NRRAPTGTRASLTV
Trigger: TACCGTCAGTGATGCCCTTGTTCCCGTGGGAGCCCTTCGGTTCCACGCGGTTCCCACCACGCGCCCGCCAACCCTAGCCCGAGGCCTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS TCA 90 bp GACTCGAGTCCCCGCAACCCCCGGACTCGCTCCCAAAGTCCGAGTTaGTGGAATCGCAGTGTCGCTCGTACTCGCCCAGCACCGACATGG +
Preference number: 5 (lower is better)
Translates to: DSSPRNPRTRSQSPS*WNRSVARTRPAPTW
Trigger: CCATGTCGGTGCTGGGCGAGTACGAGCGACACTGCGATTCCATCAACTCGGACTTTGGGAGCGAGTCCGGGGGTTGCGGGGACTCGAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000238616.10
ENST00000553823.6
ENST00000553945.1
ENST00000554258.1
ENST00000556170.5
ENST00000557673.6
ENST00000677411.1
ENST00000678037.1
CDS TCA 90 bp GAACCGCGTGGAACCGAAGGGCTCCCACGGGAACAAGGGCATCACTaGCGGTACGGCCTCTCGGGTCTATTGACCCTTCTCTGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: EPRGTEGLPREQGHH*RYGLSGLLTLLCLP
Trigger: GGGGAGGCAGAGAAGGGTCAATAGACCCGAGAGGCCGTACCGTCAGTGATGCCCTTGTTCCCGTGGGAGCCCTTCGGTTCCACGCGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS-3UTR CAA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGGGAGACCCTGATCACTaGCTTCCCACCAAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGGDPDH*LPTKGS
Trigger: GGACCCCTTGGTGGGAAGCAAGTGATCAGGGTCTCC...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CAGCTGACCATGGAGTTTAGTGCCTCCTTGCATGTTCACCCAAGTGTACAGTTCCGGCGGCCGCGGGCCTaGGGGACCAGCCTGCGTATG +
Preference number: 5 (lower is better)
Translates to: QLTMEFSASLHVHPSVQFRRPRA*GTSLRM
Trigger: CATACGCAGGCTGGTCCCCAAGGCCCGCGGCCGCCG...GAACTGTACACTTGGGTGAACATGCAAGGAGGCACTAAACTCCATGGTCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CAA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGCCACAGGCCAGCACTTaGCCTGACTGGGTCAACAGA +
Preference number: 5 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMPQAST*PDWVNR
Trigger: TCTGTTGACCCAGTCAGGCAAAGTGCTGGCCTGTGG...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGGGTTTGGTGCTGGCTTaGGGCCACTCAGGTAGGAAA +
Preference number: 5 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGGLVLA*GHSGRK
Trigger: TTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAACC...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCAGGCCTCGGGCTAGGGTaGGCGGGCGCGTGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPGLGLG*AGAWWE
Trigger: TTCCCACCACGCGCCCGCCAACCCTAGCCCGAGGCC...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS TCA 90 bp CACGGGAACAAGGGCATCACTGACGGTACGGCCTCTCGGGTCTATTaGCCCTTCTCTGCCTCCCCGGTCCGGACTCATACAACTTGGAGG +
Preference number: 5 (lower is better)
Translates to: HGNKGITDGTASRVY*PFSASPVRTHTTWR
Trigger: CCTCCAAGTTGTATGAGTCCGGACCGGGGAGGCAGAGAAGGGTCAATAGACCCGAGAGGCCGTACCGTCAGTGATGCCCTTGTTCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS-3UTR CAA 90 bp AAACTCATCACCGCAGGAGACCCTGATCACTTGCTTCCCACCAAGGGGTCCCCCTCAGGGCCAGCAACTTaGTCCACCCCCATGCAGCCA +
Preference number: 5 (lower is better)
Translates to: KLITAGDPDHLLPTKGSPSGPAT*STPMQP
Trigger: TGGCTGCATGGGGGTGGACAAAGTTGCTGGCCCTGA...GGGGGACCCCTTGGTGGGAAGCAAGTGATCAGGGTCTCCTGCGGTGATGAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CAA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTTCAGGGCCAGCAACTTaGTCCACCCCCATGCAGCCA +
Preference number: 5 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTSGPAT*STPMQP
Trigger: TGGCTGCATGGGGGTGGACAAAGTTGCTGGCCCTGA...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACTCAGGGCCAGCAACTTaGTCCACCCCCATGCAGCCA +
Preference number: 5 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHSGPAT*STPMQP
Trigger: TGGCTGCATGGGGGTGGACAAAGTTGCTGGCCCTGA...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CTGGGGGCTCTACAGGCTCAGGAGACTAGAGGCTGGGTCTACAGGAGTCTGTTCGGAGACCCTGATCACTaGCTTCCCACCAAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: LGALQAQETRGWVYRSLFGDPDH*LPTKGS
Trigger: GGACCCCTTGGTGGGAAGCAAGTGATCAGGGTCTCC...GAACAGACTCCTGTAGACCCAGCCTCTAGTCTCCTGAGCCTGTAGAGCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CAA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCTCGGAAGCCTCCACTaGGGTCAGGAGTTTCAGATT +
Preference number: 5 (lower is better)
Translates to: GTHPPPALTFTPPSQQPALGSLH*GQEFQI
Trigger: AATCTGAAACTCCTGACCCAAGTGGAGGCTTCCGAG...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGTTCAGAGCCTCTGCCTaGCGCTCCTTTTCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGFRASA*RSFSAS
Trigger: ACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGAA...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GTACGCAGTAATAGAACCAGGAAAGAAAGCCCACAGAGAATCATGATGTGGAGGCGGCGGCCGCGGGCCTaGGGGACCAGCCTGCGTATG +
Preference number: 5 (lower is better)
Translates to: VRSNRTRKESPQRIMMWRRRPRA*GTSLRM
Trigger: CATACGCAGGCTGGTCCCCAAGGCCCGCGGCCGCCG...CCTCCACATCATGATTCTCTGTGGGCTTTCTTTCCTGGTTCTATTACTGCGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS-3UTR CAA 90 bp CACATGCTTTGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACCATGAGGGACTCCCAGGGTTaGGTGCTGGCTTTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: HMLWLSIGGFVSMAQLTMRDSQG*VLALGH
Trigger: GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCT...CATGGTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCAAAGCATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CAA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCCTCCCAAAGTCCGAGTaGATGGAATCGCAGTGTCGC +
Preference number: 5 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPLPKSE*MESQCR
Trigger: GCGACACTGCGATTCCATCAACTCGGACTTTGGGAG...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678037.1
CDS-3UTR CAA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGACTTTTCCACATGCTTaGGCTGTCGATAGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGTFPHA*AVDRRL
Trigger: AAGCCTCCTATCGACAGCCAAAGCATGTGGAAAAGT...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCCACAGGCCAGCACTTaGCCTGACTGGGTCAACAGA +
Preference number: 5 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISPQAST*PDWVNR
Trigger: TCTGTTGACCCAGTCAGGCAAAGTGCTGGCCTGTGG...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGCCCAGCTGCCCACACTaGTTGCAGCCAAAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQPSCPH*LQPKVS
Trigger: GCTGACCTTTGGCTGCAACAAGTGTGGGCAGCTGGG...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTCGGTCTGCTTCCATaGTTCCTCGGAAGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISLGLLP*FLGSLH
Trigger: GTGGAGGCTTCCGAGGAACAATGGAAGCAGACCGAG...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGGCTTCTACTTGGGGTTaGTGTTCCAAAGGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGASTWG*CSKGAS
Trigger: TGAAGCTCCTTTGGAACACAAACCCCAAGTAGAAGC...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGTTTGGTGCTGGCTTaGGGCCACTCAGGTAGGAAA +
Preference number: 5 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTGLVLA*GHSGRK
Trigger: TTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAACC...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGCCAAAGAAGATCCCATaGAACAGAGTTGCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMPKKIP*NRVACP
Trigger: GGGACAGGCAACTCTGTTCAATGGGATCTTCTTTGG...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCTGTGCAGATGTCCCTaGCATTGTTTCTGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: GTHPPPALTFTPPSQQPALCRCP*HCFCSK
Trigger: CTTGGAACAGAAACAATGCAAGGGACATCTGCACAG...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CAA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCTCTCGGGTCTATaGACCCTTCTCTGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALGLSGL*TLLCLP
Trigger: GGGGAGGCAGAGAAGGGTCAATAGACCCGAGAGGCC...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS-3UTR CAA 90 bp TACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTCGGCGGCCGCGGGCCTaGGGGACCAGCCTGCGTATG +
Preference number: 5 (lower is better)
Translates to: YSLWLASFSAHNAYETITRRPRA*GTSLRM
Trigger: CATACGCAGGCTGGTCCCCAAGGCCCGCGGCCGCCG...AGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CAA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTCATGGCCCGAATTCCTaGCACGATCTTCACACACAG +
Preference number: 5 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTHGPNS*HDLHTQ
Trigger: CTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCATG...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACGCACTACAGCCACTCTaGATAACATCCAGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHALQPL*ITSSFW
Trigger: CCAGAAACTGGATGTTATCAAGAGTGGCTGTAGTGC...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACTTTTCCACATGCTTaGGCTGTCGATAGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHTFPHA*AVDRRL
Trigger: AAGCCTCCTATCGACAGCCAAAGCATGTGGAAAAGT...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp AAACTCATCACCGCAGGAGACCCTGATCACTTGCTTCCCACCAAGGGGTCCCCCACCTGCTCCACTGGATaGCTGAGGAAGAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: KLITAGDPDHLLPTKGSPTCSTG*LRKKFS
Trigger: GCTGAACTTCTTCCTCAGCAATCCAGTGGAGCAGGT...GGGGGACCCCTTGGTGGGAAGCAAGTGATCAGGGTCTCCTGCGGTGATGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CAA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACACCTGCTCCACTGGATaGCTGAGGAAGAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHTCSTG*LRKKFS
Trigger: GCTGAACTTCTTCCTCAGCAATCCAGTGGAGCAGGT...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CACATGCTTTGGCTGTCGATAGGAGGCTTTGTCTCCATGGCCCAGCTGACCATGCCACAGGCCAGCACTTaGCCTGACTGGGTCAACAGA +
Preference number: 5 (lower is better)
Translates to: HMLWLSIGGFVSMAQLTMPQAST*PDWVNR
Trigger: TCTGTTGACCCAGTCAGGCAAAGTGCTGGCCTGTGG...CATGGTCAGCTGGGCCATGGAGACAAAGCCTCCTATCGACAGCCAAAGCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CAA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCAGCTTATTGAATTCATaGAGTCCACAGGCCAGCACT +
Preference number: 5 (lower is better)
Translates to: GTHPPPALTFTPPSQQPASLLNS*SPQAST
Trigger: AGTGCTGGCCTGTGGACTCAATGAATTCAATAAGCT...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGAGCTGCCCACACTTGTaGCAGCCAAAGGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGSCPHL*QPKVSS
Trigger: GCTGCTGACCTTTGGCTGCAACAAGTGTGGGCAGCT...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGTCTCTGTGGGGGTCATaGCCAGGCGGCCATTACCAC +
Preference number: 5 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALSLWGS*PGGHYH
Trigger: GTGGTAATGGCCGCCTGGCAATGACCCCCACAGAGA...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACGGTACAGAGCTGCTGTaGCTATGGCAGTCACTGATG +
Preference number: 5 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHGTELL*LWQSLM
Trigger: CATCAGTGACTGCCATAGCAACAGCAGCTCTGTACC...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCAGGGACTCCCAGGGTTaGGTGCTGGCTTTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTRDSQG*VLALGH
Trigger: GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCT...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCTTACTCCATCCCCCTTaGAACTGGTTTCTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: GTHPPPALTFTPPSQQPALLHPP*NWFLFA
Trigger: TGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAA...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCATGGCAACATGTGGATaGCTTTGCTCCACAGATGTT +
Preference number: 5 (lower is better)
Translates to: GTHPPPALTFTPPSQQPAMATCG*LCSTDV
Trigger: AACATCTGTGGAGCAAAGCAATCCACATGTTGCCAT...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR CAA 90 bp GTCTCCATGGCCCAGCTGACCATGGAGTTTAGTGCCTCCTTGCATGTTCACCCACTCCCAAAGTCCGAGTaGATGGAATCGCAGTGTCGC +
Preference number: 5 (lower is better)
Translates to: VSMAQLTMEFSASLHVHPLPKSE*MESQCR
Trigger: GCGACACTGCGATTCCATCAACTCGGACTTTGGGAG...TGGGTGAACATGCAAGGAGGCACTAAACTCCATGGTCAGCTGGGCCATGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CAA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACACCCAGCTGCCCACACTaGTTGCAGCCAAAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETPSCPH*LQPKVS
Trigger: GCTGACCTTTGGCTGCAACAAGTGTGGGCAGCTGGG...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCATCTCTGTGGGGGTCATaGCCAGGCGGCCATTACCAC +
Preference number: 5 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPSLWGS*PGGHYH
Trigger: GTGGTAATGGCCGCCTGGCAATGACCCCCACAGAGA...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTCGGAAGCCTCCACTaGGGTCAGGAGTTTCAGATT +
Preference number: 5 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISLGSLH*GQEFQI
Trigger: AATCTGAAACTCCTGACCCAAGTGGAGGCTTCCGAG...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATCTCGGTCTGCTTCCATaGTTCCTCGGAAGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHLGLLP*FLGSLH
Trigger: GTGGAGGCTTCCGAGGAACAATGGAAGCAGACCGAG...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGCTCGGTCTGCTTCCATaGTTCCTCGGAAGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALLGLLP*FLGSLH
Trigger: GTGGAGGCTTCCGAGGAACAATGGAAGCAGACCGAG...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGGGCCACTTTGAGTCCTaGCAGCTCTTCATAGGGCAG +
Preference number: 5 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGGHFES*QLFIGQ
Trigger: CTGCCCTATGAAGAGCTGCAAGGACTCAAAGTGGCC...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGATGGCAAAATTTCCATaGCACAAGACCTCCCACAAT +
Preference number: 5 (lower is better)
Translates to: GLPRGPDYFTTLQRTLGGMAKFP*HKTSHN
Trigger: ATTGTGGGAGGTCTTGTGCAATGGAAATTTTGCCAT...CCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCAGATGTCCCTTGCATaGTTTCTGTTCCAAGAACAT +
Preference number: 5 (lower is better)
Translates to: GTHPPPALTFTPPSQQPAQMSLA*FLFQEH
Trigger: ATGTTCTTGGAACAGAAACAATGCAAGGGACATCTG...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS TCA 90 bp CTTAGCGTTCACTTACCACCCAAGTGTACAGTTCCTTCTCCACTGTaGCCACAGCAAAGTGGGTATTCCCTGCACAGACCTGCCGGGCAC +
Preference number: 5 (lower is better)
Translates to: LSVHLPPKCTVPSPL*PQQSGYSLHRPAGH
Trigger: GTGCCCGGCAGGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAACTGTACACTTGGGTGGTAAGTGAACGCTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677411.1
CDS-3UTR CAA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAACGGCGGCCGCGGGCCTaGGGGACCAGCCTGCGTATG +
Preference number: 5 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQRRPRA*GTSLRM
Trigger: CATACGCAGGCTGGTCCCCAAGGCCCGCGGCCGCCG...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CAA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGCACTACAGCCACTCTaGATAACATCCAGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTALQPL*ITSSFW
Trigger: CCAGAAACTGGATGTTATCAAGAGTGGCTGTAGTGC...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CTTTGTCCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACTCAGGGCCAGCAACTTaGTCCACCCCCATGCAGCCA +
Preference number: 5 (lower is better)
Translates to: LCPPPCSHNNLIRRHRADSGPAT*STPMQP
Trigger: TGGCTGCATGGGGGTGGACAAAGTTGCTGGCCCTGA...GTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
CDS-3UTR CAA 90 bp TGCACAGACCTGCCGGGCACTACAGCCACTCTTGATAACATCCAGTTTCTGGGGACCTGCTCCACTGGATaGCTGAGGAAGAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: CTDLPGTTATLDNIQFLGTCSTG*LRKKFS
Trigger: GCTGAACTTCTTCCTCAGCAATCCAGTGGAGCAGGT...CCCCAGAAACTGGATGTTATCAAGAGTGGCTGTAGTGCCCGGCAGGTCTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CAA 90 bp CTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCCATGACAATAATCAAGGCCTaGGGAACATCCACCTTTTGT +
Preference number: 5 (lower is better)
Translates to: LTHPRHSLSPHLLSNLPMTIIKA*GTSTFC
Trigger: ACAAAAGGTGGATGTTCCCAAGGCCTTGATTATTGT...CATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCCCACAGGCCAGCACTTaGCCTGACTGGGTCAACAGA +
Preference number: 5 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTPQAST*PDWVNR
Trigger: TCTGTTGACCCAGTCAGGCAAAGTGCTGGCCTGTGG...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCAAGCTTATTGAATTCATaGAGTCCACAGGCCAGCACT +
Preference number: 5 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPSLLNS*SPQAST
Trigger: AGTGCTGGCCTGTGGACTCAATGAATTCAATAAGCT...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCATGGTATGCTTCATGGTaGATAATTCCCGACATGCAC +
Preference number: 5 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPWYASW*IIPDMH
Trigger: GTGCATGTCGGGAATTATCAACCATGAAGCATACCA...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCAGCTGCCCACACTTGTaGCAGCCAAAGGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTSCPHL*QPKVSS
Trigger: GCTGCTGACCTTTGGCTGCAACAAGTGTGGGCAGCT...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGGCTTCAGAGGCCACTTaGAGTCCTTGCAGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQASEAT*SPCSSS
Trigger: TGAAGAGCTGCAAGGACTCAAAGTGGCCTCTGAAGC...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GGCACTCACCCACCCCCGGCACTCACTTTCACCCCACCTTCTCAGCAACCTGCCAATCTAAGTCAGGCTTaGGATCCATTTCCATCTCTT +
Preference number: 5 (lower is better)
Translates to: GTHPPPALTFTPPSQQPANLSQA*DPFPSL
Trigger: AAGAGATGGAAATGGATCCAAAGCCTGACTTAGATT...GGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGTTCAGAGCCTCTGCCTaGCGCTCCTTTTCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQFRASA*RSFSAS
Trigger: ACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGAA...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTCCAAAGAAGATCCCATaGAACAGAGTTGCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: CLSRAMGFSPSISLYATSPKKIP*NRVACP
Trigger: GGGACAGGCAACTCTGTTCAATGGGATCTTCTTTGG...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCCATTGAACAGAGTTGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCAACTGGCATTATCACTaGGAAAGGCCCCCACTGAGA +
Preference number: 5 (lower is better)
Translates to: PIEQSCLSRAMGFSPSISNWHYH*ERPPLR
Trigger: TCTCAGTGGGGGCCTTTCCAAGTGATAATGCCAGTT...GCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CAA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACAAGAGAAGTTGTAACTaGGCTGTGCTATGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHKRSCN*AVLCQG
Trigger: TCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTT...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CAA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATAGTGAGTCATCCCTCTaGGCTAGTCTAGCGGCCAAG +
Preference number: 5 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHSESSL*ASLAAK
Trigger: CTTGGCCGCTAGACTAGCCAAGAGGGATGACTCACT...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS-3UTR CAA 90 bp CTGGGGGCTCTACAGGCTCAGGAGACTAGAGGCTGGGTCTACAGGAGTCTGTTCAGCTTATTGAATTCATaGAGTCCACAGGCCAGCACT +
Preference number: 5 (lower is better)
Translates to: LGALQAQETRGWVYRSLFSLLNS*SPQAST
Trigger: AGTGCTGGCCTGTGGACTCAATGAATTCAATAAGCT...GAACAGACTCCTGTAGACCCAGCCTCTAGTCTCCTGAGCCTGTAGAGCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CAA 90 bp TTCTGCATTTTCCAGCTCCTTTCGAAGCCAGCCAGGACAGGAGCTGCTGGCCCCTGGTATGCTTCATGGTaGATAATTCCCGACATGCAC +
Preference number: 5 (lower is better)
Translates to: FCIFQLLSKPARTGAAGPWYASW*IIPDMH
Trigger: GTGCATGTCGGGAATTATCAACCATGAAGCATACCA...GGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CAA 90 bp CGCATGGCACAAATTGGGTGGGGTTTAGAATCAGATGCTCCTCCAGATGGGAATAGCTGCCCACACTTGTaGCAGCCAAAGGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RMAQIGWGLESDAPPDGNSCPHL*QPKVSS
Trigger: GCTGCTGACCTTTGGCTGCAACAAGTGTGGGCAGCT...ATTCCCATCTGGAGGAGCATCTGATTCTAAACCCCACCCAATTTGTGCCATGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR CAA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAACCCAGCTGCCCACACTaGTTGCAGCCAAAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: GFSPSISLYATSFGEMAKPSCPH*LQPKVS
Trigger: GCTGACCTTTGGCTGCAACAAGTGTGGGCAGCTGGG...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTACCCAGCTGCCCACACTaGTTGCAGCCAAAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: PTVTVYDNPRKSPELATLPSCPH*LQPKVS
Trigger: GCTGACCTTTGGCTGCAACAAGTGTGGGCAGCTGGG...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAGGAGACCCTGATCACTaGCTTCCCACCAAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: GFSPSISLYATSFGEMAKGDPDH*LPTKGS
Trigger: GGACCCCTTGGTGGGAAGCAAGTGATCAGGGTCTCC...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTGGCCACTTTGAGTCCTaGCAGCTCTTCATAGGGCAG +
Preference number: 5 (lower is better)
Translates to: SSMAEAILMMNTQTDPASGHFES*QLFIGQ
Trigger: CTGCCCTATGAAGAGCTGCAAGGACTCAAAGTGGCC...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCAGGCCACTTTGAGTCCTaGCAGCTCTTCATAGGGCAG +
Preference number: 5 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPGHFES*QLFIGQ
Trigger: CTGCCCTATGAAGAGCTGCAAGGACTCAAAGTGGCC...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTTTACTCCATCCCCCTTaGAACTGGTTTCTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTLLHPP*NWFLFA
Trigger: TGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAA...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGGAGTTTAGTGCCTCCTaGCATGTTCACCCAAGTGTA +
Preference number: 5 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQEFSAS*HVHPSV
Trigger: TACACTTGGGTGAACATGCAAGGAGGCACTAAACTC...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GTCTCCATGGCCCAGCTGACCATGGAGTTTAGTGCCTCCTTGCATGTTCACCCAACTTTTCCACATGCTTaGGCTGTCGATAGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: VSMAQLTMEFSASLHVHPTFPHA*AVDRRL
Trigger: AAGCCTCCTATCGACAGCCAAAGCATGTGGAAAAGT...TGGGTGAACATGCAAGGAGGCACTAAACTCCATGGTCAGCTGGGCCATGGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CAA 90 bp CCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGCCACACAATAATCAAGGCCTaGGGAACATCCACCTTTTGT +
Preference number: 5 (lower is better)
Translates to: PVLLGFRDSQGLVLALGHTIIKA*GTSTFC
Trigger: ACAAAAGGTGGATGTTCCCAAGGCCTTGATTATTGT...GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCCCCATCACAGCCACATaGAACTGCAACAATAATCAA +
Preference number: 5 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPPITAT*NCNNNQ
Trigger: TTGATTATTGTTGCAGTTCAATGTGGCTGTGATGGG...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TGGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTGAAGCACAGCCACAGGCCAGCACTTaGCCTGACTGGGTCAACAGA +
Preference number: 5 (lower is better)
Translates to: WMFYPQRLRSMHRLTEAQPQAST*PDWVNR
Trigger: TCTGTTGACCCAGTCAGGCAAAGTGCTGGCCTGTGG...CTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CAA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTAGCTTATTGAATTCATaGAGTCCACAGGCCAGCACT +
Preference number: 5 (lower is better)
Translates to: CLSRAMGFSPSISLYATSSLLNS*SPQAST
Trigger: AGTGCTGGCCTGTGGACTCAATGAATTCAATAAGCT...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCTTCAGACCCAGCTTATaGAATTCATTGAGTCCACAG +
Preference number: 5 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPFRPSL*NSLSPQ
Trigger: CTGTGGACTCAATGAATTCAATAAGCTGGGTCTGAA...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTGGTATGCTTCATGGTaGATAATTCCCGACATGCAC +
Preference number: 5 (lower is better)
Translates to: CLSRAMGFSPSISLYATSWYASW*IIPDMH
Trigger: GTGCATGTCGGGAATTATCAACCATGAAGCATACCA...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAAGCTGCCCACACTTGTaGCAGCCAAAGGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GFSPSISLYATSFGEMAKSCPHL*QPKVSS
Trigger: GCTGCTGACCTTTGGCTGCAACAAGTGTGGGCAGCT...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp ATTCCTTTTGCAAGTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGAGACCCTGATCACTaGCTTCCCACCAAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: IPFASSTCSVRLQGLPGFGDPDH*LPTKGS
Trigger: GGACCCCTTGGTGGGAAGCAAGTGATCAGGGTCTCC...AAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACACTCGGAAGCCTCCACTaGGGTCAGGAGTTTCAGATT +
Preference number: 5 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETLGSLH*GQEFQI
Trigger: AATCTGAAACTCCTGACCCAAGTGGAGGCTTCCGAG...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGCTCGGTCTGCTTCCATaGTTCCTCGGAAGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQLGLLP*FLGSLH
Trigger: GTGGAGGCTTCCGAGGAACAATGGAAGCAGACCGAG...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCGCTTCAGAGGCCACTTaGAGTCCTTGCAGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTASEAT*SPCSSS
Trigger: TGAAGAGCTGCAAGGACTCAAAGTGGCCTCTGAAGC...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCGTTCAACTTCTGCAGTaGGGTAAAAATCTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPVQLLQ*GKNLEV
Trigger: AACCTCCAGATTTTTACCCAACTGCAGAAGTTGAAC...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCAAATCTAAGTCAGGCTTaGGATCCATTTCCATCTCTT +
Preference number: 5 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPNLSQA*DPFPSL
Trigger: AAGAGATGGAAATGGATCCAAAGCCTGACTTAGATT...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTTTCAGAGCCTCTGCCTaGCGCTCCTTTTCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: SSMAEAILMMNTQTDPASFRASA*RSFSAS
Trigger: ACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGAA...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACTTTATGCCACCAGTTTaGGAGAAATGGCAAAATTTC +
Preference number: 5 (lower is better)
Translates to: SQEGQTTSPLCRGHWAGHFMPPV*EKWQNF
Trigger: GAAATTTTGCCATTTCTCCAAAACTGGTGGCATAAA...GTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCAAACTTTGAAGTCAGGTaGTATACCTGTGAAGAAGTG +
Preference number: 5 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPNFEVR*YTCEEV
Trigger: CACTTCTTCACAGGTATACAACCTGACTTCAAAGTT...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CAA 90 bp GTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGCACTACAGCCACTCTaGATAACATCCAGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: VLPVLLGFRDSQGLVLALALQPL*ITSSFW
Trigger: CCAGAAACTGGATGTTATCAAGAGTGGCTGTAGTGC...CAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATACTTTTCCACATGCTTaGGCTGTCGATAGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHTFPHA*AVDRRL
Trigger: AAGCCTCCTATCGACAGCCAAAGCATGTGGAAAAGT...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TACAGGAGTCTGTTCCCAGGAGGCACCAGGAATCTGAATCTAAGTCAGGCTTTGCTCGGAAGCCTCCACTaGGGTCAGGAGTTTCAGATT +
Preference number: 5 (lower is better)
Translates to: YRSLFPGGTRNLNLSQALLGSLH*GQEFQI
Trigger: AATCTGAAACTCCTGACCCAAGTGGAGGCTTCCGAG...CAAAGCCTGACTTAGATTCAGATTCCTGGTGCCTCCTGGGAACAGACTCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CAA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAGGCCACTTTGAGTCCTaGCAGCTCTTCATAGGGCAG +
Preference number: 5 (lower is better)
Translates to: GFSPSISLYATSFGEMAKGHFES*QLFIGQ
Trigger: CTGCCCTATGAAGAGCTGCAAGGACTCAAAGTGGCC...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTGTTCAACTTCTGCAGTaGGGTAAAAATCTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: CLSRAMGFSPSISLYATSVQLLQ*GKNLEV
Trigger: AACCTCCAGATTTTTACCCAACTGCAGAAGTTGAAC...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGAGGACACTGAAACAAGCCCTAGATaGACTCCATCAGACATATTT +
Preference number: 5 (lower is better)
Translates to: GLRAPKRARLLHHSAEDTETSPR*TPSDIF
Trigger: AAATATGTCTGATGGAGTCAATCTAGGGCTTGTTTC...AGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGGGTTTGGTGCTGGCTTaGGGCCACTCAGGTAGGAAA +
Preference number: 5 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQGLVLA*GHSGRK
Trigger: TTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAACC...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAGGTTTGGTGCTGGCTTaGGGCCACTCAGGTAGGAAA +
Preference number: 5 (lower is better)
Translates to: GFSPSISLYATSFGEMAKGLVLA*GHSGRK
Trigger: TTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAACC...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCAGGGACTCCCAGGGTTaGGTGCTGGCTTTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPRDSQG*VLALGH
Trigger: GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCT...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CTACTTCACCACTCTGCAGAGGACACTGGGCGGGCCACACCTGATTCCAGCCCATTTATGCCACCAGTTTaGGAGAAATGGCAAAATTTC +
Preference number: 5 (lower is better)
Translates to: LLHHSAEDTGRATPDSSPFMPPV*EKWQNF
Trigger: GAAATTTTGCCATTTCTCCAAAACTGGTGGCATAAA...TGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCCCAAAGAAGATCCCATaGAACAGAGTTGCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTPKKIP*NRVACP
Trigger: GGGACAGGCAACTCTGTTCAATGGGATCTTCTTTGG...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS TCA 90 bp TTCCTTTGGAATGCATCCCCACCTTTATATTTACTGCAGGTAGGGTaGCCAACTATCCAGGTTTGTCCAGGACTGCGGGGTTTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: FLWNASPPLYLLQVG*PTIQVCPGLRGFLG
Trigger: TCCCAGGAAACCCCGCAGTCCTGGACAAACCTGGATAGTTGGTCACCCTACCTGCAGTAAATATAAAGGTGGGGATGCATTCCAAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555763.1
CDS-3UTR CAA 90 bp ACACCACCATCAGTACGCAGTAATAGAACCAGGAAAGAAAGCCCACAGAGAATCCTCCCAAAGTCCGAGTaGATGGAATCGCAGTGTCGC +
Preference number: 5 (lower is better)
Translates to: TPPSVRSNRTRKESPQRILPKSE*MESQCR
Trigger: GCGACACTGCGATTCCATCAACTCGGACTTTGGGAG...GATTCTCTGTGGGCTTTCTTTCCTGGTTCTATTACTGCGTACTGATGGTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS-3UTR CAA 90 bp TGCCTGTCCCGAGCAATGGGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTGCCCAGATATCAGACTaGAAATTGTACTTTACTCCT +
Preference number: 5 (lower is better)
Translates to: CLSRAMGFSPSISLYATSAQISD*KLYFTP
Trigger: AGGAGTAAAGTACAATTTCAAGTCTGATATCTGGGC...ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCAGAGTTTAGTGCCTCCTaGCATGTTCACCCAAGTGTA +
Preference number: 5 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPEFSAS*HVHPSV
Trigger: TACACTTGGGTGAACATGCAAGGAGGCACTAAACTC...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACCCTCATGAGTTTAGTGCCTCCTaGCATGTTCACCCAAGTGTA +
Preference number: 5 (lower is better)
Translates to: PPPCSHNNLIRRHRADPHEFSAS*HVHPSV
Trigger: TACACTTGGGTGAACATGCAAGGAGGCACTAAACTC...ATGAGGGTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CAA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCAACTTTTCCACATGCTTaGGCTGTCGATAGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPTFPHA*AVDRRL
Trigger: AAGCCTCCTATCGACAGCCAAAGCATGTGGAAAAGT...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTTCAGGGCCAGCAACTTaGTCCACCCCCATGCAGCCA +
Preference number: 5 (lower is better)
Translates to: YSLWLASFSAHNAYETITSGPAT*STPMQP
Trigger: TGGCTGCATGGGGGTGGACAAAGTTGCTGGCCCTGA...AGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CAA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAACCTGCTCCACTGGATaGCTGAGGAAGAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: PTVTVYDNPRKSPELATLTCSTG*LRKKFS
Trigger: GCTGAACTTCTTCCTCAGCAATCCAGTGGAGCAGGT...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTGGTGCTGGCTTTGGGGGGAACATCCACCTTTaGTGGTGTATAATAATCCTC +
Preference number: 5 (lower is better)
Translates to: STCSVRLQGLPGFGAGFGGNIHL*WCIIIL
Trigger: GAGGATTATTATACACCACAAAAGGTGGATGTTCCC...CCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTCTCTGTGGGGGTCATaGCCAGGCGGCCATTACCAC +
Preference number: 5 (lower is better)
Translates to: ASSFTPSPFELVSVCILVSLWGS*PGGHYH
Trigger: GTGGTAATGGCCGCCTGGCAATGACCCCCACAGAGA...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAACTCGGAAGCCTCCACTaGGGTCAGGAGTTTCAGATT +
Preference number: 5 (lower is better)
Translates to: GFSPSISLYATSFGEMAKLGSLH*GQEFQI
Trigger: AATCTGAAACTCCTGACCCAAGTGGAGGCTTCCGAG...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAGCTTCAGAGGCCACTTaGAGTCCTTGCAGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: PTVTVYDNPRKSPELATLASEAT*SPCSSS
Trigger: TGAAGAGCTGCAAGGACTCAAAGTGGCCTCTGAAGC...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TCAGCTGCATGGGTTCTAGCACTTCAGGGCCAGCAACTTTGTCCACCCCCATGCAATCTAAGTCAGGCTTaGGATCCATTTCCATCTCTT +
Preference number: 5 (lower is better)
Translates to: SAAWVLALQGQQLCPPPCNLSQA*DPFPSL
Trigger: AAGAGATGGAAATGGATCCAAAGCCTGACTTAGATT...GCATGGGGGTGGACAAAGTTGCTGGCCCTGAAGTGCTAGAACCCATGCAGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CAA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGGGTACAGAGCTGCTGTaGCTATGGCAGTCACTGATG +
Preference number: 5 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQGTELL*LWQSLM
Trigger: CATCAGTGACTGCCATAGCAACAGCAGCTCTGTACC...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATTCAGAAAGAAAGTGGTaGGGGCTGCTGATATCAAGA +
Preference number: 5 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHSERKW*GLLISR
Trigger: TCTTGATATCAGCAGCCCCAACCACTTTCTTTCTGA...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCAGGTTTGGTGCTGGCTTaGGGCCACTCAGGTAGGAAA +
Preference number: 5 (lower is better)
Translates to: PREVVTWLCYARETKFSSGLVLA*GHSGRK
Trigger: TTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAACC...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CAA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTAGGGACTCCCAGGGTTaGGTGCTGGCTTTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGRDSQG*VLALGH
Trigger: GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCT...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GACACTGGGCGGGCCACACCTGATTCCAGCCCACTCCAACTTTACACTTCTCCCTTTATGCCACCAGTTTaGGAGAAATGGCAAAATTTC +
Preference number: 5 (lower is better)
Translates to: DTGRATPDSSPLQLYTSPFMPPV*EKWQNF
Trigger: GAAATTTTGCCATTTCTCCAAAACTGGTGGCATAAA...GGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCCCGGACTCATACAACTaGGAGGCCCAGAGGTCGTCC +
Preference number: 5 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPPDSYN*EAQRSS
Trigger: GGACGACCTCTGGGCCTCCAAGTTGTATGAGTCCGG...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS-3UTR CAA 90 bp GCCCCAAGAATAGACTTCCTTGTTTCGTGTCAGAACCACCACATGATTATCTCCCATGGCCCGAATTCCTaGCACGATCTTCACACACAG +
Preference number: 5 (lower is better)
Translates to: APRIDFLVSCQNHHMIISHGPNS*HDLHTQ
Trigger: CTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCATG...GGAGATAATCATGTGGTGGTTCTGACACGAAACAAGGAAGTCTATTCTTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CAA 90 bp TACAGGAGTCTGTTCCCAGGAGGCACCAGGAATCTGAATCTAAGTCAGGCTTTGGCACTACAGCCACTCTaGATAACATCCAGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: YRSLFPGGTRNLNLSQALALQPL*ITSSFW
Trigger: CCAGAAACTGGATGTTATCAAGAGTGGCTGTAGTGC...CAAAGCCTGACTTAGATTCAGATTCCTGGTGCCTCCTGGGAACAGACTCCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CAA 90 bp TCAGTGGCAGCAATGGTAAACTCATCACCGCAGGAGACCCTGATCACTTGCTTCACGGATAGCTTTGCCTaGCAACTTTTCCACATGCTT +
Preference number: 5 (lower is better)
Translates to: SVAAMVNSSPQETLITCFTDSFA*QLFHML
Trigger: AAGCATGTGGAAAAGTTGCAAGGCAAAGCTATCCGT...GAAGCAAGTGATCAGGGTCTCCTGCGGTGATGAGTTTACCATTGCTGCCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CAA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTACGGATAGCTTTGCCTaGCAACTTTTCCACATGCTT +
Preference number: 5 (lower is better)
Translates to: SSMAEAILMMNTQTDPASTDSFA*QLFHML
Trigger: AAGCATGTGGAAAAGTTGCAAGGCAAAGCTATCCGT...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTTCAGGGCCAGCAACTTaGTCCACCCCCATGCAGCCA +
Preference number: 5 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGSGPAT*STPMQP
Trigger: TGGCTGCATGGGGGTGGACAAAGTTGCTGGCCCTGA...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp ATAGCATGTACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCACAGGCCAGCACTTaGCCTGACTGGGTCAACAGA +
Preference number: 5 (lower is better)
Translates to: IACTLCGWLLFLHTMPMRPQAST*PDWVNR
Trigger: TCTGTTGACCCAGTCAGGCAAAGTGCTGGCCTGTGG...TCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CAA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACAAGCTTATTGAATTCATaGAGTCCACAGGCCAGCACT +
Preference number: 5 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETSLLNS*SPQAST
Trigger: AGTGCTGGCCTGTGGACTCAATGAATTCAATAAGCT...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCAGCTGCCCACACTTGTaGCAGCCAAAGGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: FPRQLPINGENDTWDISCSCPHL*QPKVSS
Trigger: GCTGCTGACCTTTGGCTGCAACAAGTGTGGGCAGCT...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp ATTCCTTTTGCAAGTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTTTCAGAGCCTCTGCCTaGCGCTCCTTTTCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: IPFASSTCSVRLQGLPGFFRASA*RSFSAS
Trigger: ACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGAA...AAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp ATTTTCCTGGACTCAGGGCTCCCAAGAGGGCCAGACTACTTCACCACTCTGCAGGAAACAAGCCCTAGATaGACTCCATCAGACATATTT +
Preference number: 5 (lower is better)
Translates to: IFLDSGLPRGPDYFTTLQETSPR*TPSDIF
Trigger: AAATATGTCTGATGGAGTCAATCTAGGGCTTGTTTC...CTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACCCTCATTCAGAAAGAAAGTGGTaGGGGCTGCTGATATCAAGA +
Preference number: 5 (lower is better)
Translates to: PPPCSHNNLIRRHRADPHSERKW*GLLISR
Trigger: TCTTGATATCAGCAGCCCCAACCACTTTCTTTCTGA...ATGAGGGTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CAA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACATCAGAAAGAAAGTGGTaGGGGCTGCTGATATCAAGA +
Preference number: 5 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETSERKW*GLLISR
Trigger: TCTTGATATCAGCAGCCCCAACCACTTTCTTTCTGA...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCATCAGAAAGAAAGTGGTaGGGGCTGCTGATATCAAGA +
Preference number: 5 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPSERKW*GLLISR
Trigger: TCTTGATATCAGCAGCCCCAACCACTTTCTTTCTGA...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACATTACTCCATCCCCCTTaGAACTGGTTTCTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETLLHPP*NWFLFA
Trigger: TGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAA...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GAAAATGACCACAGCGTTCCACTGCTAGGGAAAGGCTCCCCTATGAACAAGACCTTACTCCATCCCCCTTaGAACTGGTTTCTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: ENDHSVPLLGKGSPMNKTLLHPP*NWFLFA
Trigger: TGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAA...GGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp ATAGCATGTACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACTCCCAAAGTCCGAGTaGATGGAATCGCAGTGTCGC +
Preference number: 5 (lower is better)
Translates to: IACTLCGWLLFLHTMPMRLPKSE*MESQCR
Trigger: GCGACACTGCGATTCCATCAACTCGGACTTTGGGAG...TCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CAA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCCTCCCAAAGTCCGAGTaGATGGAATCGCAGTGTCGC +
Preference number: 5 (lower is better)
Translates to: FPRQLPINGENDTWDISCLPKSE*MESQCR
Trigger: GCGACACTGCGATTCCATCAACTCGGACTTTGGGAG...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238616.10
ENST00000678037.1
CDS-3UTR CAA 90 bp TTCGTGATGTTACTACAGCAATGGGTGCTTCAGTCACAGTGCTTGACCTTGGTCGCACTACAGCCACTCTaGATAACATCCAGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: FVMLLQQWVLQSQCLTLVALQPL*ITSSFW
Trigger: CCAGAAACTGGATGTTATCAAGAGTGGCTGTAGTGC...GACCAAGGTCAAGCACTGTGACTGAAGCACCCATTGCTGTAGTAACATCACGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CAA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGGCACTACAGCCACTCTaGATAACATCCAGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQALQPL*ITSSFW
Trigger: CCAGAAACTGGATGTTATCAAGAGTGGCTGTAGTGC...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAATCAGGGCCAGCAACTTaGTCCACCCCCATGCAGCCA +
Preference number: 5 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQSGPAT*STPMQP
Trigger: TGGCTGCATGGGGGTGGACAAAGTTGCTGGCCCTGA...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACCCTCATGGGAACATCCACCTTTaGTGGTGTATAATAATCCTC +
Preference number: 5 (lower is better)
Translates to: PPPCSHNNLIRRHRADPHGNIHL*WCIIIL
Trigger: GAGGATTATTATACACCACAAAAGGTGGATGTTCCC...ATGAGGGTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CAA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCATTCAGACCCAGCTTATaGAATTCATTGAGTCCACAG +
Preference number: 5 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPFRPSL*NSLSPQ
Trigger: CTGTGGACTCAATGAATTCAATAAGCTGGGTCTGAA...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAGCTTCTACTTGGGGTTaGTGTTCCAAAGGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: PTVTVYDNPRKSPELATLASTWG*CSKGAS
Trigger: TGAAGCTCCTTTGGAACACAAACCCCAAGTAGAAGC...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp AGCTCCATGGCAGAAGCAATCCTCATGATGAACACCCAAACTGACCCAGCCTCTGTTCAACTTCTGCAGTaGGGTAAAAATCTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: SSMAEAILMMNTQTDPASVQLLQ*GKNLEV
Trigger: AACCTCCAGATTTTTACCCAACTGCAGAAGTTGAAC...AGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCTTCTCAGCAACCTGCCCATGTCCATCAGCTCCATGGCAGAAGCAATCCTCATAATCTAAGTCAGGCTTaGGATCCATTTCCATCTCTT +
Preference number: 5 (lower is better)
Translates to: PSQQPAHVHQLHGRSNPHNLSQA*DPFPSL
Trigger: AAGAGATGGAAATGGATCCAAAGCCTGACTTAGATT...ATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAAGGGACTCCCAGGGTTaGGTGCTGGCTTTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: FYKARWKYKAHILKETIKRDSQG*VLALGH
Trigger: GTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCT...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TTTACACTTCTCCCTCTCCCACCCAGAGGGGTAATGCCTGGTACTGAATTCCCACAGATGTCCCTTGCATaGTTTCTGTTCCAAGAACAT +
Preference number: 5 (lower is better)
Translates to: FTLLPLPPRGVMPGTEFPQMSLA*FLFQEH
Trigger: ATGTTCTTGGAACAGAAACAATGCAAGGGACATCTG...TGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CAA 90 bp TGGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTGAAGCACAGCTGTGCAGATGTCCCTaGCATTGTTTCTGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: WMFYPQRLRSMHRLTEAQLCRCP*HCFCSK
Trigger: CTTGGAACAGAAACAATGCAAGGGACATCTGCACAG...CTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CAA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAAAGAGAAGTTGTAACTaGGCTGTGCTATGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: PTVTVYDNPRKSPELATLKRSCN*AVLCQG
Trigger: TCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTT...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS TCA 90 bp CCAATCAGGACACTCACTTCATGGTTGATAATTCCCGACATGCACTaGTTCAGACCCAGCTTATTGAATTCATTGAGTCCACAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PIRTLTSWLIIPDMH*FRPSLLNSLSPQAS
Trigger: GCTGGCCTGTGGACTCAATGAATTCAATAAGCTGGGTCTGAATCAGTGCATGTCGGGAATTATCAACCATGAAGTGAGTGTCCTGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS GCA 90 bp TCCAAAGAGTACTGGCTAGAGTCAACTTCCATGGCCCGAATTCCTTaGACGATCTTCACACACAGGTTAAGTGGGTTTGTAGCATCAAAC +
Preference number: 5 (lower is better)
Translates to: SKEYWLESTSMARIP*TIFTHRLSGFVASN
Trigger: GTTTGATGCTACAAACCCACTTAACCTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCATGGAAGTTGACTCTAGCCAGTACTCTTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000238616.10
ENST00000553823.6
ENST00000556170.5
ENST00000557026.5
ENST00000677411.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GTTTCTTTGCTAGGCCATAATCTCCAAGTTTTATCAGGTTTGCCTTGGTCAGAACTCCCAAAGTCCGAGTaGATGGAATCGCAGTGTCGC +
Preference number: 5 (lower is better)
Translates to: VSLLGHNLQVLSGLPWSELPKSE*MESQCR
Trigger: GCGACACTGCGATTCCATCAACTCGGACTTTGGGAG...TTCTGACCAAGGCAAACCTGATAAAACTTGGAGATTATGGCCTAGCAAAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554258.1
CDS-3UTR CAA 90 bp CTTTGTCCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACATTGTACTTTACTCCTaGACAGAGCTCTGGAGACAT +
Preference number: 5 (lower is better)
Translates to: LCPPPCSHNNLIRRHRADIVLYS*TELWRH
Trigger: ATGTCTCCAGAGCTCTGTCAAGGAGTAAAGTACAAT...GTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CAA 90 bp TACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTCATGGCCCGAATTCCTaGCACGATCTTCACACACAG +
Preference number: 5 (lower is better)
Translates to: YSLWLASFSAHNAYETITHGPNS*HDLHTQ
Trigger: CTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCATG...AGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CAA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAACATGGCCCGAATTCCTaGCACGATCTTCACACACAG +
Preference number: 5 (lower is better)
Translates to: PALSLFLTEEISINPQRKHGPNS*HDLHTQ
Trigger: CTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCATG...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCCATGGCCCGAATTCCTaGCACGATCTTCACACACAG +
Preference number: 5 (lower is better)
Translates to: FPRQLPINGENDTWDISCHGPNS*HDLHTQ
Trigger: CTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCATG...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACAGCACGAATGAACCATTaGGATCAATTCCAAAGAGTA +
Preference number: 5 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETARMNH*DQFQRV
Trigger: TACTCTTTGGAATTGATCCAAATGGTTCATTCGTGC...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TGGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTGAAGCACAGACGGATAGCTTTGCCTaGCAACTTTTCCACATGCTT +
Preference number: 5 (lower is better)
Translates to: WMFYPQRLRSMHRLTEAQTDSFA*QLFHML
Trigger: AAGCATGTGGAAAAGTTGCAAGGCAAAGCTATCCGT...CTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CAA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAACGGATAGCTTTGCCTaGCAACTTTTCCACATGCTT +
Preference number: 5 (lower is better)
Translates to: PTVTVYDNPRKSPELATLTDSFA*QLFHML
Trigger: AAGCATGTGGAAAAGTTGCAAGGCAAAGCTATCCGT...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTACCTGCTCCACTGGATaGCTGAGGAAGAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: YSLWLASFSAHNAYETITTCSTG*LRKKFS
Trigger: GCTGAACTTCTTCCTCAGCAATCCAGTGGAGCAGGT...AGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CAA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCACCTGCTCCACTGGATaGCTGAGGAAGAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPTCSTG*LRKKFS
Trigger: GCTGAACTTCTTCCTCAGCAATCCAGTGGAGCAGGT...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAACCTGCTCCACTGGATaGCTGAGGAAGAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: PALSLFLTEEISINPQRKTCSTG*LRKKFS
Trigger: GCTGAACTTCTTCCTCAGCAATCCAGTGGAGCAGGT...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACGGAGACCCTGATCACTaGCTTCCCACCAAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHGDPDH*LPTKGS
Trigger: GGACCCCTTGGTGGGAAGCAAGTGATCAGGGTCTCC...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACTCTCTGTGGGGGTCATaGCCAGGCGGCCATTACCAC +
Preference number: 5 (lower is better)
Translates to: NKITPRSYLKGNATLQMYSLWGS*PGGHYH
Trigger: GTGGTAATGGCCGCCTGGCAATGACCCCCACAGAGA...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACTCTCTGTGGGGGTCATaGCCAGGCGGCCATTACCAC +
Preference number: 5 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHSLWGS*PGGHYH
Trigger: GTGGTAATGGCCGCCTGGCAATGACCCCCACAGAGA...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAACTCGGTCTGCTTCCATaGTTCCTCGGAAGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQLGLLP*FLGSLH
Trigger: GTGGAGGCTTCCGAGGAACAATGGAAGCAGACCGAG...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCGCTTCAGAGGCCACTTaGAGTCCTTGCAGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPASEAT*SPCSSS
Trigger: TGAAGAGCTGCAAGGACTCAAAGTGGCCTCTGAAGC...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAATTCAGAGCCTCTGCCTaGCGCTCCTTTTCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: PALSLFLTEEISINPQRKFRASA*RSFSAS
Trigger: ACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGAA...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCGGTACAGAGCTGCTGTaGCTATGGCAGTCACTGATG +
Preference number: 5 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPGTELL*LWQSLM
Trigger: CATCAGTGACTGCCATAGCAACAGCAGCTCTGTACC...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCACTGTGCAGATGTCCCTaGCATTGTTTCTGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: PREVVTWLCYARETKFSSLCRCP*HCFCSK
Trigger: CTTGGAACAGAAACAATGCAAGGGACATCTGCACAG...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CAA 90 bp TCCCCTCATCCACAGTTAGGAAATCCCACCCTGCATTGGTCACAGCCTGAAACAGATATGGAACATCTCTaGAAAAACTGGAAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: SPHPQLGNPTLHWSQPETDMEHL*KNWKFW
Trigger: CCAGAACTTCCAGTTTTTCAAGAGATGTTCCATATC...TGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR CAA 90 bp CACCCAAGTGTACAGTTCCTTCTCCACTGTGACCACAGCAAAGTGGGTATTCCCAACTTTGAAGTCAGGTaGTATACCTGTGAAGAAGTG +
Preference number: 5 (lower is better)
Translates to: HPSVQFLLHCDHSKVGIPNFEVR*YTCEEV
Trigger: CACTTCTTCACAGGTATACAACCTGACTTCAAAGTT...GGGAATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAACTGTACACTTGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CAA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACGCCCAGATCATGCCATaGCACTCCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: NKITPRSYLKGNATLQMYAQIMP*HSSLGD
Trigger: GTCACCCAGGCTGGAGTGCAATGGCATGATCTGGGC...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS CCA 90 bp CAGGACATTTCTGTTTCCAACAATGTGACTAACAGTACTCAGATGTaGGTCCATCCTCTGTCAAAGCCATCCCAACCCCAGACATATGAA +
Preference number: 5 (lower is better)
Translates to: QDISVSNNVTNSTQM*VHPLSKPSQPQTYE
Trigger: TTCATATGTCTGGGGTTGGGATGGCTTTGACAGAGGATGGACCCACATCTGAGTACTGTTAGTCACATTGTTGGAAACAGAAATGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555537.1
CDS-3UTR CAA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAATTGTACTTTACTCCTaGACAGAGCTCTGGAGACAT +
Preference number: 5 (lower is better)
Translates to: GFSPSISLYATSFGEMAKIVLYS*TELWRH
Trigger: ATGTCTCCAGAGCTCTGTCAAGGAGTAAAGTACAAT...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CAGCTGACCATGGAGTTTAGTGCCTCCTTGCATGTTCACCCAAGTGTACAGTTCGCCCAGATATCAGACTaGAAATTGTACTTTACTCCT +
Preference number: 5 (lower is better)
Translates to: QLTMEFSASLHVHPSVQFAQISD*KLYFTP
Trigger: AGGAGTAAAGTACAATTTCAAGTCTGATATCTGGGC...GAACTGTACACTTGGGTGAACATGCAAGGAGGCACTAAACTCCATGGTCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS-3UTR CAA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGACAATAATCAAGGCCTaGGGAACATCCACCTTTTGT +
Preference number: 5 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQTIIKA*GTSTFC
Trigger: ACAAAAGGTGGATGTTCCCAAGGCCTTGATTATTGT...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GGGTTCTCCCCAAGCATCAGCCTTTATGCCACCAGTTTTGGAGAAATGGCAAAAACAATAATCAAGGCCTaGGGAACATCCACCTTTTGT +
Preference number: 5 (lower is better)
Translates to: GFSPSISLYATSFGEMAKTIIKA*GTSTFC
Trigger: ACAAAAGGTGGATGTTCCCAAGGCCTTGATTATTGT...TTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TGGATGTTTTATCCCCAGAGACTAAGGTCCATGCACAGGCTTACTGAAGCACAGTTCAGACCCAGCTTATaGAATTCATTGAGTCCACAG +
Preference number: 5 (lower is better)
Translates to: WMFYPQRLRSMHRLTEAQFRPSL*NSLSPQ
Trigger: CTGTGGACTCAATGAATTCAATAAGCTGGGTCTGAA...CTGTGCTTCAGTAAGCCTGTGCATGGACCTTAGTCTCTGGGGATAAAACATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CAA 90 bp ATATGGCTGTCCCAGGCACAATATGGGAAAGTGCAAACTGTCTCTAAGGCACAGGTTCAACTTCTGCAGTaGGGTAAAAATCTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: IWLSQAQYGKVQTVSKAQVQLLQ*GKNLEV
Trigger: AACCTCCAGATTTTTACCCAACTGCAGAAGTTGAAC...CTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CTTTGTCCACCCCCATGCAGCCATAATAATCTGATCCGAAGGCATAGAGCTGACGAAACAAGCCCTAGATaGACTCCATCAGACATATTT +
Preference number: 5 (lower is better)
Translates to: LCPPPCSHNNLIRRHRADETSPR*TPSDIF
Trigger: AAATATGTCTGATGGAGTCAATCTAGGGCTTGTTTC...GTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS TCA 90 bp ATACCTAGCCATCTTCAATCACTGCTGTGGGCTTCAGGGGTTTCCTaGCATGGTATAGTCCTTCCTTTGTTTACAAAGCTATTTCACAGG +
Preference number: 5 (lower is better)
Translates to: IPSHLQSLLWASGVS*HGIVLPLFTKLFHR
Trigger: CCTGTGAAATAGCTTTGTAAACAAAGGAAGGACTATACCATGTCAGGAAACCCCTGAAGCCCACAGCAGTGATTGAAGATGGCTAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677411.1
CDS GCA 90 bp CATGAAGTGATTGTAGTAGGCAATAATGTTGTCGTGCTGCAGCAGTaGCAGAATAACAATCTCATTCAAGGCATCACGACGTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: HEVIVVGNNVVVLQQ*QNNNLIQGITTFLL
Trigger: GAGAAGGAACGTCGTGATGCCTTGAATGAGATTGTTATTCTGGCACTGCTGCAGCACGACAACATTATTGCCTACTACAATCACTTCATG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000238616.10
ENST00000553823.6
ENST00000553945.1
ENST00000556170.5
ENST00000557673.6
ENST00000677411.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS GCA 90 bp TTACCATTTGACAACCCTACTTACCCTGGAAAGGTGCCTATAAGCTaGATGAAGTGCAATGGCAACAGTGCAAGTCAAATGTTAGGGACT +
Preference number: 5 (lower is better)
Translates to: LPFDNPTYPGKVPIS*MKCNGNSASQMLGT
Trigger: AGTCCCTAACATTTGACTTGCACTGTTGCCATTGCACTTCATGCAGCTTATAGGCACCTTTCCAGGGTAAGTAGGGTTGTCAAATGGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555405.5
CDS-3UTR CAA 90 bp CCCACTGTTACAGTTTATGACAACCCCCGCAAGTCCCCAGAACTTGCAACTTTAGCCCAGATATCAGACTaGAAATTGTACTTTACTCCT +
Preference number: 5 (lower is better)
Translates to: PTVTVYDNPRKSPELATLAQISD*KLYFTP
Trigger: AGGAGTAAAGTACAATTTCAAGTCTGATATCTGGGC...TAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp ATAGCATGTACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGAGCACTACAGCCACTCTaGATAACATCCAGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: IACTLCGWLLFLHTMPMRALQPL*ITSSFW
Trigger: CCAGAAACTGGATGTTATCAAGAGTGGCTGTAGTGC...TCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CAA 90 bp TACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTGAGTTTAGTGCCTCCTaGCATGTTCACCCAAGTGTA +
Preference number: 5 (lower is better)
Translates to: YSLWLASFSAHNAYETITEFSAS*HVHPSV
Trigger: TACACTTGGGTGAACATGCAAGGAGGCACTAAACTC...AGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CAA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCGAGTTTAGTGCCTCCTaGCATGTTCACCCAAGTGTA +
Preference number: 5 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPEFSAS*HVHPSV
Trigger: TACACTTGGGTGAACATGCAAGGAGGCACTAAACTC...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAGAGTTTAGTGCCTCCTaGCATGTTCACCCAAGTGTA +
Preference number: 5 (lower is better)
Translates to: PALSLFLTEEISINPQRKEFSAS*HVHPSV
Trigger: TACACTTGGGTGAACATGCAAGGAGGCACTAAACTC...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp ATTCCTTTTGCAAGTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTCCCATCACAGCCACATaGAACTGCAACAATAATCAA +
Preference number: 5 (lower is better)
Translates to: IPFASSTCSVRLQGLPGFPITAT*NCNNNQ
Trigger: TTGATTATTGTTGCAGTTCAATGTGGCTGTGATGGG...AAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCAAGAGAAGTTGTAACTTGGCTGTGCTATGCCAGGGAGACCAAATTCAGTTCACCCATCACAGCCACATaGAACTGCAACAATAATCAA +
Preference number: 5 (lower is better)
Translates to: PREVVTWLCYARETKFSSPITAT*NCNNNQ
Trigger: TTGATTATTGTTGCAGTTCAATGTGGCTGTGATGGG...TGAACTGAATTTGGTCTCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CAA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACGGCCACTTTGAGTCCTaGCAGCTCTTCATAGGGCAG +
Preference number: 5 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHGHFES*QLFIGQ
Trigger: CTGCCCTATGAAGAGCTGCAAGGACTCAAAGTGGCC...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp ACTCTCAACCTTTCAAGCAACCTGGCTAACAATAAACTAGTTCTTCTGCAACAAGGTACAGAGCTGCTGTaGCTATGGCAGTCACTGATG +
Preference number: 5 (lower is better)
Translates to: TLNLSSNLANNKLVLLQQGTELL*LWQSLM
Trigger: CATCAGTGACTGCCATAGCAACAGCAGCTCTGTACC...TTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp ATTCCTTTTGCAAGTTCTACCTGTTCTGTTAGGCTTCAGGGACTCCCAGGGTTTATGGCAAAATTTCCATaGCACAAGACCTCCCACAAT +
Preference number: 5 (lower is better)
Translates to: IPFASSTCSVRLQGLPGFMAKFP*HKTSHN
Trigger: ATTGTGGGAGGTCTTGTGCAATGGAAATTTTGCCAT...AAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCAAGAGAAGTTGTAACTaGGCTGTGCTATGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPKRSCN*AVLCQG
Trigger: TCCCTGGCATAGCACAGCCAAGTTACAACTTCTCTT...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS TCA 90 bp TATCAGAGCCTGGAAGGAGTCTCTTCCTCAAACAACTTGTCCTTCTaGCGAAGGATTTTGTCATACAGGTTCCCTCCATTACAATATTCC +
Preference number: 5 (lower is better)
Translates to: YQSLEGVSSSNNLSF*RRILSYRFPPLQYS
Trigger: GGAATATTGTAATGGAGGGAACCTGTATGACAAAATCCTTCGTCAGAAGGACAAGTTGTTTGAGGAAGAGACTCCTTCCAGGCTCTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS GCA 90 bp GACAACCCTACTTACCCTGGAAAGGTGCCTATAAGCTGCATGAAGTaGAATGGCAACAGTGCAAGTCAAATGTTAGGGACTAAATTTTTG +
Preference number: 5 (lower is better)
Translates to: DNPTYPGKVPISCMK*NGNSASQMLGTKFL
Trigger: CAAAAATTTAGTCCCTAACATTTGACTTGCACTGTTGCCATTGCACTTCATGCAGCTTATAGGCACCTTTCCAGGGTAAGTAGGGTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555405.5
CDS-3UTR CAA 90 bp CCCACAAGCGTCTCAGCCATGGAATACTCAGAATTAAGTTTCTTTGCTAGGCCAGCCCAGATATCAGACTaGAAATTGTACTTTACTCCT +
Preference number: 5 (lower is better)
Translates to: PTSVSAMEYSELSFFARPAQISD*KLYFTP
Trigger: AGGAGTAAAGTACAATTTCAAGTCTGATATCTGGGC...TGGCCTAGCAAAGAAACTTAATTCTGAGTATTCCATGGCTGAGACGCTTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554258.1
CDS-3UTR CAA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACCATGGCCCGAATTCCTaGCACGATCTTCACACACAG +
Preference number: 5 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHHGPNS*HDLHTQ
Trigger: CTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCATG...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CAAGATATAGACCATTCCCATTACTCTAGGATCCCTTCCACCTCTTCTGTTAATACTTTTCCACATGCTTaGGCTGTCGATAGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: QDIDHSHYSRIPSTSSVNTFPHA*AVDRRL
Trigger: AAGCCTCCTATCGACAGCCAAAGCATGTGGAAAAGT...ATTAACAGAAGAGGTGGAAGGGATCCTAGAGTAATGGGAATGGTCTATATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CAA 90 bp GCATACAACTTTGAAGTCAGGTTGTATACCTGTGAAGAAGTGGACAGAGACAAGACGGATAGCTTTGCCTaGCAACTTTTCCACATGCTT +
Preference number: 5 (lower is better)
Translates to: AYNFEVRLYTCEEVDRDKTDSFA*QLFHML
Trigger: AAGCATGTGGAAAAGTTGCAAGGCAAAGCTATCCGT...CTTGTCTCTGTCCACTTCTTCACAGGTATACAACCTGACTTCAAAGTTGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557673.6
ENST00000677700.1
CDS-3UTR CAA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCTGGTATGCTTCATGGTaGATAATTCCCGACATGCAC +
Preference number: 5 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPWYASW*IIPDMH
Trigger: GTGCATGTCGGGAATTATCAACCATGAAGCATACCA...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TGCAGTTGGGTAAAAATCTGGAGGTTTTCTTGCTGTAGCTTCTGTTGTTCAGCCATGGCAAAATTTCCATaGCACAAGACCTCCCACAAT +
Preference number: 5 (lower is better)
Translates to: CSWVKIWRFSCCSFCCSAMAKFP*HKTSHN
Trigger: ATTGTGGGAGGTCTTGTGCAATGGAAATTTTGCCAT...GGCTGAACAACAGAAGCTACAGCAAGAAAACCTCCAGATTTTTACCCAACTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS-3UTR CAA 90 bp GCCCCAAGAATAGACTTCCTTGTTTCGTGTCAGAACCACCACATGATTATCTCCGATTTTGAAACAAGCTaGGGTAACATAGTGAGAACC +
Preference number: 5 (lower is better)
Translates to: APRIDFLVSCQNHHMIISDFETS*GNIVRT
Trigger: GGTTCTCACTATGTTACCCAAGCTTGTTTCAAAATC...GGAGATAATCATGTGGTGGTTCTGACACGAAACAAGGAAGTCTATTCTTGGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557673.6
CDS TCA 90 bp ACTTACAGAAATGGCTTCTTCAGGACATTTCTGTTTCCAACAATGTaGCTAACAGTACTCAGATGTGGGTCCATCCTCTGTCAAAGCCAT +
Preference number: 5 (lower is better)
Translates to: TYRNGFFRTFLFPTM*LTVLRCGSILCQSH
Trigger: ATGGCTTTGACAGAGGATGGACCCACATCTGAGTACTGTTAGTCACATTGTTGGAAACAGAAATGTCCTGAAGAAGCCATTTCTGTAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555537.1
CDS-3UTR CAA 90 bp TTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTAAAGTCATTGTACTTTACTCCTaGACAGAGCTCTGGAGACAT +
Preference number: 5 (lower is better)
Translates to: LWLASFSAHNAYETITKVIVLYS*TELWRH
Trigger: ATGTCTCCAGAGCTCTGTCAAGGAGTAAAGTACAAT...GACTTTAGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CAA 90 bp TGCCCAGATATCAGACTTGAAATTGTACTTTACTCCTTGACAGAGCTCTGGAGAATTGTACTTTACTCCTaGACAGAGCTCTGGAGACAT +
Preference number: 5 (lower is better)
Translates to: CPDIRLEIVLYSLTELWRIVLYS*TELWRH
Trigger: ATGTCTCCAGAGCTCTGTCAAGGAGTAAAGTACAAT...TCTCCAGAGCTCTGTCAAGGAGTAAAGTACAATTTCAAGTCTGATATCTGGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554258.1
CDS-3UTR CAA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTATTGTACTTTACTCCTaGACAGAGCTCTGGAGACAT +
Preference number: 5 (lower is better)
Translates to: ASSFTPSPFELVSVCILVIVLYS*TELWRH
Trigger: ATGTCTCCAGAGCTCTGTCAAGGAGTAAAGTACAAT...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCATTGTACTTTACTCCTaGACAGAGCTCTGGAGACAT +
Preference number: 5 (lower is better)
Translates to: FPRQLPINGENDTWDISCIVLYS*TELWRH
Trigger: ATGTCTCCAGAGCTCTGTCAAGGAGTAAAGTACAAT...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCGGGAACATCCACCTTTaGTGGTGTATAATAATCCTC +
Preference number: 5 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPGNIHL*WCIIIL
Trigger: GAGGATTATTATACACCACAAAAGGTGGATGTTCCC...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTAAAGTCGGGAACATCCACCTTTaGTGGTGTATAATAATCCTC +
Preference number: 5 (lower is better)
Translates to: LWLASFSAHNAYETITKVGNIHL*WCIIIL
Trigger: GAGGATTATTATACACCACAAAAGGTGGATGTTCCC...GACTTTAGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CAA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCACAATAATCAAGGCCTaGGGAACATCCACCTTTTGT +
Preference number: 5 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPTIIKA*GTSTFC
Trigger: ACAAAAGGTGGATGTTCCCAAGGCCTTGATTATTGT...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTCCCATCACAGCCACATaGAACTGCAACAATAATCAA +
Preference number: 5 (lower is better)
Translates to: ASSFTPSPFELVSVCILVPITAT*NCNNNQ
Trigger: TTGATTATTGTTGCAGTTCAATGTGGCTGTGATGGG...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CAAGATATAGACCATTCCCATTACTCTAGGATCCCTTCCACCTCTTCTGTTAATAGCTTATTGAATTCATaGAGTCCACAGGCCAGCACT +
Preference number: 5 (lower is better)
Translates to: QDIDHSHYSRIPSTSSVNSLLNS*SPQAST
Trigger: AGTGCTGGCCTGTGGACTCAATGAATTCAATAAGCT...ATTAACAGAAGAGGTGGAAGGGATCCTAGAGTAATGGGAATGGTCTATATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CAA 90 bp ATAGCATGTACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGATTCAGACCCAGCTTATaGAATTCATTGAGTCCACAG +
Preference number: 5 (lower is better)
Translates to: IACTLCGWLLFLHTMPMRFRPSL*NSLSPQ
Trigger: CTGTGGACTCAATGAATTCAATAAGCTGGGTCTGAA...TCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CAA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCGTTCAACTTCTGCAGTaGGGTAAAAATCTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: FPRQLPINGENDTWDISCVQLLQ*GKNLEV
Trigger: AACCTCCAGATTTTTACCCAACTGCAGAAGTTGAAC...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTTCAGAAAGAAAGTGGTaGGGGCTGCTGATATCAAGA +
Preference number: 5 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGSERKW*GLLISR
Trigger: TCTTGATATCAGCAGCCCCAACCACTTTCTTTCTGA...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAATGGCAAAATTTCCATaGCACAAGACCTCCCACAAT +
Preference number: 5 (lower is better)
Translates to: PALSLFLTEEISINPQRKMAKFP*HKTSHN
Trigger: ATTGTGGGAGGTCTTGTGCAATGGAAATTTTGCCAT...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TTCCCAAGGCAGCTTCCAATCAATGGTGAAAATGATACATGGGATATAAGCTGCATGGCAAAATTTCCATaGCACAAGACCTCCCACAAT +
Preference number: 5 (lower is better)
Translates to: FPRQLPINGENDTWDISCMAKFP*HKTSHN
Trigger: ATTGTGGGAGGTCTTGTGCAATGGAAATTTTGCCAT...GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTCAGATGTCCCTTGCATaGTTTCTGTTCCAAGAACAT +
Preference number: 5 (lower is better)
Translates to: ASSFTPSPFELVSVCILVQMSLA*FLFQEH
Trigger: ATGTTCTTGGAACAGAAACAATGCAAGGGACATCTG...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CAA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAAACTGGCATTATCACTaGGAAAGGCCCCCACTGAGA +
Preference number: 5 (lower is better)
Translates to: FYKARWKYKAHILKETIKNWHYH*ERPPLR
Trigger: TCTCAGTGGGGGCCTTTCCAAGTGATAATGCCAGTT...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CAA 90 bp CAAGATATAGACCATTCCCATTACTCTAGGATCCCTTCCACCTCTTCTGTTAATACACTCACTTCATGGTaGATAATTCCCGACATGCAC +
Preference number: 5 (lower is better)
Translates to: QDIDHSHYSRIPSTSSVNTLTSW*IIPDMH
Trigger: GTGCATGTCGGGAATTATCAACCATGAAGTGAGTGT...ATTAACAGAAGAGGTGGAAGGGATCCTAGAGTAATGGGAATGGTCTATATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS GCA 90 bp AGCTCTGAAACACTGACAGATATACAGCACAGAAATAGACAGCTTTaGTATGCAGCAAGACAGATTTACCATTTGACAACCCTACTTACC +
Preference number: 5 (lower is better)
Translates to: SSETLTDIQHRNRQL*YAARQIYHLTTLLT
Trigger: GGTAAGTAGGGTTGTCAAATGGTAAATCTGTCTTGCTGCATAGCAAAGCTGTCTATTTCTGTGCTGTATATCTGTCAGTGTTTCAGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555405.5
CDS-3UTR CAA 90 bp ATAGCATGTACTCTTTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGAGCCCAGATATCAGACTaGAAATTGTACTTTACTCCT +
Preference number: 5 (lower is better)
Translates to: IACTLCGWLLFLHTMPMRAQISD*KLYFTP
Trigger: AGGAGTAAAGTACAATTTCAAGTCTGATATCTGGGC...TCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAAAGAGTACATGCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CAA 90 bp TTGTGGCTGGCTTCTTTTTCTGCACACAATGCCTATGAGACCATAACTAAAGTCGCACGAATGAACCATTaGGATCAATTCCAAAGAGTA +
Preference number: 5 (lower is better)
Translates to: LWLASFSAHNAYETITKVARMNH*DQFQRV
Trigger: TACTCTTTGGAATTGATCCAAATGGTTCATTCGTGC...GACTTTAGTTATGGTCTCATAGGCATTGTGTGCAGAAAAAGAAGCCAGCCACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CAA 90 bp GCCTCATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTGCACGAATGAACCATTaGGATCAATTCCAAAGAGTA +
Preference number: 5 (lower is better)
Translates to: ASSFTPSPFELVSVCILVARMNH*DQFQRV
Trigger: TACTCTTTGGAATTGATCCAAATGGTTCATTCGTGC...AACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CCTGCCCTTTCTCTATTCCTCACTGAAGAAATTTCAATCAACCCTCAGAGGAAAGCACGAATGAACCATTaGGATCAATTCCAAAGAGTA +
Preference number: 5 (lower is better)
Translates to: PALSLFLTEEISINPQRKARMNH*DQFQRV
Trigger: TACTCTTTGGAATTGATCCAAATGGTTCATTCGTGC...TTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACACTTTTCCACATGCTTaGGCTGTCGATAGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: NKITPRSYLKGNATLQMYTFPHA*AVDRRL
Trigger: AAGCCTCCTATCGACAGCCAAAGCATGTGGAAAAGT...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp AGAGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAACGGATAGCTTTGCCTaGCAACTTTTCCACATGCTT +
Preference number: 5 (lower is better)
Translates to: REAKNISVQMSLALFLFQTDSFA*QLFHML
Trigger: AAGCATGTGGAAAAGTTGCAAGGCAAAGCTATCCGT...TTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CAA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTTTCAGACCCAGCTTATaGAATTCATTGAGTCCACAG +
Preference number: 5 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGFRPSL*NSLSPQ
Trigger: CTGTGGACTCAATGAATTCAATAAGCTGGGTCTGAA...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAGCTTCTACTTGGGGTTaGTGTTCCAAAGGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: FYKARWKYKAHILKETIKASTWG*CSKGAS
Trigger: TGAAGCTCCTTTGGAACACAAACCCCAAGTAGAAGC...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACGCTTCTACTTGGGGTTaGTGTTCCAAAGGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHASTWG*CSKGAS
Trigger: TGAAGCTCCTTTGGAACACAAACCCCAAGTAGAAGC...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp AGTTGCATTTACATGCTGAACCAAAACCCACTGTTACAGTTTATGACAACCCCCAATCTAAGTCAGGCTTaGGATCCATTTCCATCTCTT +
Preference number: 5 (lower is better)
Translates to: SCIYMLNQNPLLQFMTTPNLSQA*DPFPSL
Trigger: AAGAGATGGAAATGGATCCAAAGCCTGACTTAGATT...GGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TTTCATTATCAATTTATCACTCTCCACAGCTACACAGGTGGTAACAGAGATGTGTTACTCCATCCCCCTTaGAACTGGTTTCTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: FHYQFITLHSYTGGNRDVLLHPP*NWFLFA
Trigger: TGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAA...CACATCTCTGTTACCACCTGTGTAGCTGTGGAGAGTGATAAATTGATAATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR CAA 90 bp CATCTTTTACTCCATCCCCCTTTGAACTGGTTTCTGTTTGCATACTTGTTTGGTGAAACAAGCCCTAGATaGACTCCATCAGACATATTT +
Preference number: 5 (lower is better)
Translates to: HLLLHPPLNWFLFAYLFGETSPR*TPSDIF
Trigger: AAATATGTCTGATGGAGTCAATCTAGGGCTTGTTTC...ACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGAGCCCAGATATCAGACTaGAAATTGTACTTTACTCCT +
Preference number: 5 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRAQISD*KLYFTP
Trigger: AGGAGTAAAGTACAATTTCAAGTCTGATATCTGGGC...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CAA 90 bp TTAAATTTTACACAGATAGAGCTATATAGCATGTACTCTTTGTGGCTGGCTTCTACGGATAGCTTTGCCTaGCAACTTTTCCACATGCTT +
Preference number: 5 (lower is better)
Translates to: LNFTQIELYSMYSLWLASTDSFA*QLFHML
Trigger: AAGCATGTGGAAAAGTTGCAAGGCAAAGCTATCCGT...AGAAGCCAGCCACAAAGAGTACATGCTATATAGCTCTATCTGTGTAAAATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CAA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAGGGAACATCCACCTTTaGTGGTGTATAATAATCCTC +
Preference number: 5 (lower is better)
Translates to: FYKARWKYKAHILKETIKGNIHL*WCIIIL
Trigger: GAGGATTATTATACACCACAAAAGGTGGATGTTCCC...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACCCCATCACAGCCACATaGAACTGCAACAATAATCAA +
Preference number: 5 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHPITAT*NCNNNQ
Trigger: TTGATTATTGTTGCAGTTCAATGTGGCTGTGATGGG...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAATTCAGACCCAGCTTATaGAATTCATTGAGTCCACAG +
Preference number: 5 (lower is better)
Translates to: FYKARWKYKAHILKETIKFRPSL*NSLSPQ
Trigger: CTGTGGACTCAATGAATTCAATAAGCTGGGTCTGAA...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAGCACGAATGAACCATTaGGATCAATTCCAAAGAGTA +
Preference number: 5 (lower is better)
Translates to: FYKARWKYKAHILKETIKARMNH*DQFQRV
Trigger: TACTCTTTGGAATTGATCCAAATGGTTCATTCGTGC...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp TTAAATTTTACACAGATAGAGCTATATAGCATGTACTCTTTGTGGCTGGCTTCTACAATAATCAAGGCCTaGGGAACATCCACCTTTTGT +
Preference number: 5 (lower is better)
Translates to: LNFTQIELYSMYSLWLASTIIKA*GTSTFC
Trigger: ACAAAAGGTGGATGTTCCCAAGGCCTTGATTATTGT...AGAAGCCAGCCACAAAGAGTACATGCTATATAGCTCTATCTGTGTAAAATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CAA 90 bp TTAAATTTTACACAGATAGAGCTATATAGCATGTACTCTTTGTGGCTGGCTTCTCCCATCACAGCCACATaGAACTGCAACAATAATCAA +
Preference number: 5 (lower is better)
Translates to: LNFTQIELYSMYSLWLASPITAT*NCNNNQ
Trigger: TTGATTATTGTTGCAGTTCAATGTGGCTGTGATGGG...AGAAGCCAGCCACAAAGAGTACATGCTATATAGCTCTATCTGTGTAAAATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS-3UTR CAA 90 bp TTTTACAAGGCTAGGTGGAAATACAAAGCTCACATCCTTAAGGAAACCATCAAAGAAACAAGCCCTAGATaGACTCCATCAGACATATTT +
Preference number: 5 (lower is better)
Translates to: FYKARWKYKAHILKETIKETSPR*TPSDIF
Trigger: AAATATGTCTGATGGAGTCAATCTAGGGCTTGTTTC...TTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS-3UTR CAA 90 bp AGAAGCAAAGAATATTTCTGTGCAGATGTCCCTTGCATTGTTTCTGTTCCAAGATTTATGCCACCAGTTTaGGAGAAATGGCAAAATTTC +
Preference number: 5 (lower is better)
Translates to: RSKEYFCADVPCIVSVPRFMPPV*EKWQNF
Trigger: GAAATTTTGCCATTTCTCCAAAACTGGTGGCATAAA...TCTTGGAACAGAAACAATGCAAGGGACATCTGCACAGAAATATTCTTTGCTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238616.10
ENST00000678037.1
ENST00000678531.1
CDS-3UTR CAA 90 bp AATAAAATCACTCCTAGATCCTATCTAAAAGGCAATGCCACTCTCCAAATGTACAGAGAGAACAAATTGTaGTTATATGTGGGGAGTGCT +
Preference number: 5 (lower is better)
Translates to: NKITPRSYLKGNATLQMYRENKL*LYVGSA
Trigger: AGCACTCCCCACATATAACAACAATTTGTTCTCTCT...GTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000238616.10
CDS-3UTR CAA 90 bp CAGGTAGGAAAAATGATACAGATTCATTCGTTACCACATGGCTTCATAAAACACTTTATGCCACCAGTTTaGGAGAAATGGCAAAATTTC +
Preference number: 5 (lower is better)
Translates to: QVGKMIQIHSLPHGFIKHFMPPV*EKWQNF
Trigger: GAAATTTTGCCATTTCTCCAAAACTGGTGGCATAAA...GTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000677700.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS CCA 72 bp CTCGCCCAGCACCGACATGGCGGCGGCCGCGGGCCTTaGGGACCAGCCTGCGTATGCCCGGAGGCCCTGGCC +
Preference number: 6 (lower is better)
Translates to: LAQHRHGGGRGP*GPACVCPEALA
Trigger: GGCCAGGGCCTCCGGGCATACGCAGGCTGGTCCCCAAGGCCCGCGGCCGCCGCCATGTCGGTGCTGGGCGAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000238616.10
ENST00000553945.1
ENST00000556170.5
ENST00000557673.6
ENST00000677411.1
ENST00000678531.1
CDS CAA 90 bp GTCGCTCGTACTCGCCCAGCACCGACATGGCGGCGGCCGCGGGCCTaGGGGACCAGCCTGCGTATGCCCGGAGGCCCTGGCCGCGCTGCG +
Preference number: 6 (lower is better)
Translates to: VARTRPAPTWRRPRA*GTSLRMPGGPGRAA
Trigger: CGCAGCGCGGCCAGGGCCTCCGGGCATACGCAGGCTGGTCCCCAAGGCCCGCGGCCGCCGCCATGTCGGTGCTGGGCGAGTACGAGCGAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238616.10
ENST00000553945.1
ENST00000556170.5
ENST00000557673.6
ENST00000677411.1
CDS GCA 72 bp GACCAGCCTGCGTATGCCCGGAGGCCCTGGCCGCGCTaGGTCCCGCTCGCTTCAGATGCCGGCCCGCGGATC +
Preference number: 6 (lower is better)
Translates to: DQPAYARRPWPR*VPLASDAGPRI
Trigger: GATCCGCGGGCCGGCATCTGAAGCGAGCGGGACGCAGCGCGGCCAGGGCCTCCGGGCATACGCAGGCTGGTC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000238616.10
ENST00000553945.1
ENST00000556170.5
ENST00000557673.6
ENST00000677411.1
ENST00000678531.1
CDS CCA 72 bp GGCCTTGGGGACCAGCCTGCGTATGCCCGGAGGCCCTaGCCGCGCTGCGTCCCGCTCGCTTCAGATGCCGGC +
Preference number: 6 (lower is better)
Translates to: GLGDQPAYARRP*PRCVPLASDAG
Trigger: GCCGGCATCTGAAGCGAGCGGGACGCAGCGCGGCCAGGGCCTCCGGGCATACGCAGGCTGGTCCCCAAGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000238616.10
ENST00000553945.1
ENST00000556170.5
ENST00000557673.6
ENST00000677411.1
ENST00000678531.1
CDS CAA 90 bp AGTGAGTCATCTCGCCCAGCACCGACATGGCGGCGGCCGCGGGCCTaGGGGACCAGCCTGCGTATGCCCGGAGGCCCTGGCCGCGCTGCG +
Preference number: 6 (lower is better)
Translates to: SESSRPAPTWRRPRA*GTSLRMPGGPGRAA
Trigger: CGCAGCGCGGCCAGGGCCTCCGGGCATACGCAGGCTGGTCCCCAAGGCCCGCGGCCGCCGCCATGTCGGTGCTGGGCGAGATGACTCACT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678531.1
CDS CCA 72 bp AATCGCAGTGTCGCTCGTACTCGCCCAGCACCGACATaGCGGCGGCCGCGGGCCTTGGGGACCAGCCTGCGT +
Preference number: 6 (lower is better)
Translates to: NRSVARTRPAPT*RRPRALGTSLR
Trigger: ACGCAGGCTGGTCCCCAAGGCCCGCGGCCGCCGCCATGTCGGTGCTGGGCGAGTACGAGCGACACTGCGATT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000238616.10
ENST00000553823.6
ENST00000553945.1
ENST00000556170.5
ENST00000557673.6
ENST00000677411.1
ENST00000678037.1
CDS CCA 72 bp CAACCAGTGAGTCATCCTCGGTGCGGCGGTACAGCGTaGCTTCCCCGAAGGCGCCGCGGCCCAGGACGCGGA +
Preference number: 6 (lower is better)
Translates to: QPVSHPRCGGTA*LPRRRRGPGRG
Trigger: TCCGCGTCCTGGGCCGCGGCGCCTTCGGGGAAGCCACGCTGTACCGCCGCACCGAGGATGACTCACTGGTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000238616.10
ENST00000553823.6
ENST00000553945.1
ENST00000556170.5
ENST00000557673.6
ENST00000677411.1
ENST00000678037.1
CDS CCA 72 bp TCATACAGGTTCCCTCCTCGGTGCGGCGGTACAGCGTaGCTTCCCCGAAGGCGCCGCGGCCCAGGACGCGGA +
Preference number: 6 (lower is better)
Translates to: SYRFPPRCGGTA*LPRRRRGPGRG
Trigger: TCCGCGTCCTGGGCCGCGGCGCCTTCGGGGAAGCCACGCTGTACCGCCGCACCGAGGAGGGAACCTGTATGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554258.1
CDS TCA 72 bp GCCAAGGCTTCCCGCTTTCGGGGAAGGCCTGCAAAGTaGGGCCTCGGGCTAGGGTTGGCGGGCGCGTGGTGG +
Preference number: 6 (lower is better)
Translates to: AKASRFRGRPAK*GLGLGLAGAWW
Trigger: CCACCACGCGCCCGCCAACCCTAGCCCGAGGCCTCACTTTGCAGGCCTTCCCCGAAAGCGGGAAGCCTTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS CCA 72 bp CGGGCTAGGGTTGGCGGGCGCGTGGTGGGAACCGCGTaGAACCGAAGGGCTCCCACGGGAACAAGGGCATCA +
Preference number: 6 (lower is better)
Translates to: RARVGGRVVGTA*NRRAPTGTRAS
Trigger: TGATGCCCTTGTTCCCGTGGGAGCCCTTCGGTTCCACGCGGTTCCCACCACGCGCCCGCCAACCCTAGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS CCA 72 bp CACACAACCAGTGAGTCATCTCGCCCAGCACCGACATaGCGGCGGCCGCGGGCCTTGGGGACCAGCCTGCGT +
Preference number: 6 (lower is better)
Translates to: HTTSESSRPAPT*RRPRALGTSLR
Trigger: ACGCAGGCTGGTCCCCAAGGCCCGCGGCCGCCGCCATGTCGGTGCTGGGCGAGATGACTCACTGGTTGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678531.1
CDS GCA 72 bp TCTAGCGGCCAAGGCTTCCCGCTTTCGGGGAAGGCCTaGAAAGTGAGGCCTCGGGCTAGGGTTGGCGGGCGC +
Preference number: 6 (lower is better)
Translates to: SSGQGFPLSGKA*KVRPRARVGGR
Trigger: GCGCCCGCCAACCCTAGCCCGAGGCCTCACTTTGCAGGCCTTCCCCGAAAGCGGGAAGCCTTGGCCGCTAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS TCA 72 bp CCCCGCAACCCCCGGACTCGCTCCCAAAGTCCGAGTTaGTGGAATCGCAGTGTCGCTCGTACTCGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: PRNPRTRSQSPS*WNRSVARTRPA
Trigger: TGCTGGGCGAGTACGAGCGACACTGCGATTCCATCAACTCGGACTTTGGGAGCGAGTCCGGGGGTTGCGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000238616.10
ENST00000553823.6
ENST00000553945.1
ENST00000554258.1
ENST00000556170.5
ENST00000557673.6
ENST00000677411.1
ENST00000678037.1
CDS CAA 72 bp TCCCCGCAACCCCCGGACTCGCTCCCAAAGTCCGAGTaGATGGAATCGCAGTGTCGCTCGTACTCGCCCAGC +
Preference number: 6 (lower is better)
Translates to: SPQPPDSLPKSE*MESQCRSYSPS
Trigger: GCTGGGCGAGTACGAGCGACACTGCGATTCCATCAACTCGGACTTTGGGAGCGAGTCCGGGGGTTGCGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000238616.10
ENST00000553823.6
ENST00000553945.1
ENST00000554258.1
ENST00000556170.5
ENST00000557673.6
ENST00000677411.1
ENST00000678037.1
CDS CAA 90 bp GGACTCGAGTCCCCGCAACCCCCGGACTCGCTCCCAAAGTCCGAGTaGATGGAATCGCAGTGTCGCTCGTACTCGCCCAGCACCGACATG +
Preference number: 6 (lower is better)
Translates to: GLESPQPPDSLPKSE*MESQCRSYSPSTDM
Trigger: CATGTCGGTGCTGGGCGAGTACGAGCGACACTGCGATTCCATCAACTCGGACTTTGGGAGCGAGTCCGGGGGTTGCGGGGACTCGAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000238616.10
ENST00000553823.6
ENST00000553945.1
ENST00000554258.1
ENST00000556170.5
ENST00000557673.6
ENST00000677411.1
ENST00000678037.1
CDS TCA 72 bp GGAACCGAAGGGCTCCCACGGGAACAAGGGCATCACTaGCGGTACGGCCTCTCGGGTCTATTGACCCTTCTC +
Preference number: 6 (lower is better)
Translates to: GTEGLPREQGHH*RYGLSGLLTLL
Trigger: GAGAAGGGTCAATAGACCCGAGAGGCCGTACCGTCAGTGATGCCCTTGTTCCCGTGGGAGCCCTTCGGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678749.1
CDS TCA 72 bp CACTTACCACCCAAGTGTACAGTTCCTTCTCCACTGTaGCCACAGCAAAGTGGGTATTCCCTGCACAGACCT +
Preference number: 6 (lower is better)
Translates to: HLPPKCTVPSPL*PQQSGYSLHRP
Trigger: AGGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAACTGTACACTTGGGTGGTAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677411.1
CDS CCA 72 bp CCATTTCCATCTCTTCCTTTGCTGTCTGAGTTCCTTTaGAATGCATCCCCACCTGTAGTCCCAGCTACTCGG +
Preference number: 6 (lower is better)
Translates to: PFPSLPLLSEFL*NASPPVVPATR
Trigger: CCGAGTAGCTGGGACTACAGGTGGGGATGCATTCCAAAGGAACTCAGACAGCAAAGGAAGAGATGGAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676711.1
CDS TCA 72 bp AAAAGAGCACCCAAGTGTACAGTTCCTTCTCCACTGTaGCCACAGCAAAGTGGGTATTCCCTGCACAGACCT +
Preference number: 6 (lower is better)
Translates to: KRAPKCTVPSPL*PQQSGYSLHRP
Trigger: AGGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAACTGTACACTTGGGTGCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677700.1
CDS CCA 72 bp CCATTTCCATCTCTTCCTTTGCTGTCTGAGTTCCTTTaGAATGCATCCCCACCTGCTGCCCTCCTTCTAATT +
Preference number: 6 (lower is better)
Translates to: PFPSLPLLSEFL*NASPPAALLLI
Trigger: AATTAGAAGGAGGGCAGCAGGTGGGGATGCATTCCAAAGGAACTCAGACAGCAAAGGAAGAGATGGAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000238616.10
ENST00000555405.5
ENST00000557026.5
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS CCA 72 bp TCTGTTTCCAACAATGTGACTAACAGTACTCAGATGTaGGTCCATCCTCTGTCAAAGCCATCCCAACCCCAG +
Preference number: 6 (lower is better)
Translates to: SVSNNVTNSTQM*VHPLSKPSQPQ
Trigger: CTGGGGTTGGGATGGCTTTGACAGAGGATGGACCCACATCTGAGTACTGTTAGTCACATTGTTGGAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555537.1
CDS CAA 72 bp GTACTGGCTAGAGTCAACTTCCATGGCCCGAATTCCTaGCACGATCTTCACACACAGGTTAAGTGGGTTTGT +
Preference number: 6 (lower is better)
Translates to: VLARVNFHGPNS*HDLHTQVKWVC
Trigger: ACAAACCCACTTAACCTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCATGGAAGTTGACTCTAGCCAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000238616.10
ENST00000553823.6
ENST00000556170.5
ENST00000557026.5
ENST00000677411.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS GCA 72 bp GACAACCCTACTTACCCTGGAAAGGTGCCTATAAGCTaGATGAAGTGCAATGGCAACAGTGCAAGTCAAATG +
Preference number: 6 (lower is better)
Translates to: DNPTYPGKVPIS*MKCNGNSASQM
Trigger: CATTTGACTTGCACTGTTGCCATTGCACTTCATGCAGCTTATAGGCACCTTTCCAGGGTAAGTAGGGTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555405.5
CDS CAA 90 bp TTCCAAAGAGTACTGGCTAGAGTCAACTTCCATGGCCCGAATTCCTaGCACGATCTTCACACACAGGTTAAGTGGGTTTGTAGCATCAAA +
Preference number: 6 (lower is better)
Translates to: FQRVLARVNFHGPNS*HDLHTQVKWVCSIK
Trigger: TTTGATGCTACAAACCCACTTAACCTGTGTGTGAAGATCGTGCAAGGAATTCGGGCCATGGAAGTTGACTCTAGCCAGTACTCTTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000238616.10
ENST00000553823.6
ENST00000556170.5
ENST00000557026.5
ENST00000677411.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS CAA 72 bp TGGGAGATAAGGAAACAGACAGCAAACACAGACAATTaGTTAAGGAAGGTGAGAGGGGAGAATCTAGAGGGC +
Preference number: 6 (lower is better)
Translates to: WEIRKQTANTDN*LRKVRGENLEG
Trigger: GCCCTCTAGATTCTCCCCTCTCACCTTCCTTAACAAATTGTCTGTGTTTGCTGTCTGTTTCCTTATCTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677411.1
CDS CAA 90 bp CCAGGAAATGACAATGTTCTGTTCCCACCACTAGGCATGGCATCCTaGACCATTACAAGACTTACAGAAATGGCTTCTTCAGGACATTTC +
Preference number: 6 (lower is better)
Translates to: PGNDNVLFPPLGMAS*TITRLTEMASSGHF
Trigger: GAAATGTCCTGAAGAAGCCATTTCTGTAAGTCTTGTAATGGTCAAGGATGCCATGCCTAGTGGTGGGAACAGAACATTGTCATTTCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555537.1
CDS TCA 72 bp AACATCCACCTTTTGTGGTGTATAATAATCCTCTTCTaGATCCAAACCCAGTCGTCCATATTCGCCACAGCC +
Preference number: 6 (lower is better)
Translates to: NIHLLWCIIILF*IQTQSSIFATA
Trigger: GGCTGTGGCGAATATGGACGACTGGGTTTGGATTCAGAAGAGGATTATTATACACCACAAAAGGTGGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238616.10
ENST00000553823.6
ENST00000678531.1
ENST00000678749.1
CDS TCA 72 bp CTGGAAGGAGTCTCTTCCTCAAACAACTTGTCCTTCTaGCGAAGGATTTTGTCATACAGGTTCCCTCCATTA +
Preference number: 6 (lower is better)
Translates to: LEGVSSSNNLSF*RRILSYRFPPL
Trigger: TAATGGAGGGAACCTGTATGACAAAATCCTTCGTCAGAAGGACAAGTTGTTTGAGGAAGAGACTCCTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553945.1
CDS TCA 72 bp CATCTTCAATCACTGCTGTGGGCTTCAGGGGTTTCCTaGCATGGTATAGTCCTTCCTTTGTTTACAAAGCTA +
Preference number: 6 (lower is better)
Translates to: HLQSLLWASGVS*HGIVLPLFTKL
Trigger: TAGCTTTGTAAACAAAGGAAGGACTATACCATGTCAGGAAACCCCTGAAGCCCACAGCAGTGATTGAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677411.1
CDS GCA 72 bp ATTGTAGTAGGCAATAATGTTGTCGTGCTGCAGCAGTaGCAGAATAACAATCTCATTCAAGGCATCACGACG +
Preference number: 6 (lower is better)
Translates to: IVVGNNVVVLQQ*QNNNLIQGITT
Trigger: CGTCGTGATGCCTTGAATGAGATTGTTATTCTGGCACTGCTGCAGCACGACAACATTATTGCCTACTACAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000238616.10
ENST00000553823.6
ENST00000553945.1
ENST00000556170.5
ENST00000557673.6
ENST00000677411.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1
CDS GCA 72 bp AAGTCCTGGGCAAAACAATCTTCTCCCTGCTATAGCTaGCAATCTTACCTTGTGTGTGTGTGTGTTTTTGAG +
Preference number: 6 (lower is better)
Translates to: KSWAKQSSPCYS*QSYLVCVCVFE
Trigger: CTCAAAAACACACACACACACAAGGTAAGATTGGCAGCTATAGCAGGGAGAAGATTGTTTTGCCCAGGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555763.1
CDS CAA 72 bp GACAATGTTCTGTTCCCACCACTAGGCATGGCATCCTaGACCATTACAAGACTTACAGAAATGGCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: DNVLFPPLGMAS*TITRLTEMASS
Trigger: TGAAGAAGCCATTTCTGTAAGTCTTGTAATGGTCAAGGATGCCATGCCTAGTGGTGGGAACAGAACATTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555537.1
CDS CAA 90 bp AAGAGAGAGTGGGAGATAAGGAAACAGACAGCAAACACAGACAATTaGTTAAGGAAGGTGAGAGGGGAGAATCTAGAGGGCAACAAACAA +
Preference number: 6 (lower is better)
Translates to: KREWEIRKQTANTDN*LRKVRGENLEGNKQ
Trigger: TTGTTTGTTGCCCTCTAGATTCTCCCCTCTCACCTTCCTTAACAAATTGTCTGTGTTTGCTGTCTGTTTCCTTATCTCCCACTCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677411.1
CDS TCA 72 bp AACATCCACCTTTTGTGGTGTATAATAATCCTCTTCTaGATCCAAACCCAGTCGTCCTGTGAAGAAGTGGAC +
Preference number: 6 (lower is better)
Translates to: NIHLLWCIIILF*IQTQSSCEEVD
Trigger: GTCCACTTCTTCACAGGACGACTGGGTTTGGATTCAGAAGAGGATTATTATACACCACAAAAGGTGGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678037.1
CDS CCA 72 bp TCAATCACTGCTGTGGGCTTCAGGGGTTTCCTGACATaGTATAGTCCTTCCTTTGTTTACAAAGCTATTTCA +
Preference number: 6 (lower is better)
Translates to: SITAVGFRGFLT*YSPSFVYKAIS
Trigger: TGAAATAGCTTTGTAAACAAAGGAAGGACTATACCATGTCAGGAAACCCCTGAAGCCCACAGCAGTGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677411.1
CDS TCA 72 bp ACACTCACTTCATGGTTGATAATTCCCGACATGCACTaGTTCAGACCCAGCTTATTGAATTCATTGAGTCCA +
Preference number: 6 (lower is better)
Translates to: TLTSWLIIPDMH*FRPSLLNSLSP
Trigger: TGGACTCAATGAATTCAATAAGCTGGGTCTGAATCAGTGCATGTCGGGAATTATCAACCATGAAGTGAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553823.6
CDS GCA 72 bp TGCTCTTATAAGAGCTTCCATTCCATCACCCCATGTTaGCACTCCCTTAGTATAGGTTCAACTAATAAAATG +
Preference number: 6 (lower is better)
Translates to: CSYKSFHSITPC*HSLSIGSTNKM
Trigger: CATTTTATTAGTTGAACCTATACTAAGGGAGTGGCAACATGGGGTGATGGAATGGAAGCTCTTATAAGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677411.1
CDS GCA 72 bp TCTTTATATCTCTATGAAGGATTCCAGCTTTATGGATaGAGCTCACTGCTGAAACAATCTGAAATAGGTACC +
Preference number: 6 (lower is better)
Translates to: SLYLYEGFQLYG*SSLLKQSEIGT
Trigger: GGTACCTATTTCAGATTGTTTCAGCAGTGAGCTGCATCCATAAAGCTGGAATCCTTCATAGAGATATAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000238616.10
ENST00000553823.6
ENST00000554258.1
ENST00000555961.1
ENST00000556170.5
ENST00000557673.6
ENST00000677411.1
ENST00000678037.1
ENST00000678531.1
ENST00000678749.1