RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NEK8 (Homo sapiens)

Ensembl gene IDs: ENSG00000160602

Ensembl transcript IDs: ENST00000268766.11, ENST00000543014.1, ENST00000579060.5, ENST00000579671.5, ENST00000581000.1, ENST00000584342.5, ENST00000592510.1, ENST00000593261.1

Found 326 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTGGTCTCCCAACTCCTGGCCACAAGGGATCAAGGGATCCTCCTaGCCAAAGCACTGCCTATGCAGGTGTGAGCCACCGCCGCCGGCC +
Preference number: 1 (lower is better)
Translates to: GWSPNSWPQGIKGSS*PKHCLCRCEPPPPA
Trigger: GGCCGGCGGCGGTGGCTCACACCTGCATAGGCAGTGCTTTGGCCAGGAGGATCCCTTGATCCCTTGTGGCCAGGAGTTGGGAGACCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
3UTR TCA 90 bp AGGGATCAAGGGATCCTCCTGGCCAAAGCACTGCCTATGCAGGTGTaGGCCACCGCCGCCGGCCCAGACTTATTTTCTAACTGGGCTAGG +
Preference number: 1 (lower is better)
Translates to: RDQGILLAKALPMQV*ATAAGPDLFSNWAR
Trigger: CCTAGCCCAGTTAGAAAATAAGTCTGGGCCGGCGGCGGTGGCTCACACCTGCATAGGCAGTGCTTTGGCCAGGAGGATCCCTTGATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
3UTR CCA 90 bp GAGCCACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTaGAGGCCACCCTGCTTCCAAAGGCTAGGTCTGCCTTCTAACTCT +
Preference number: 1 (lower is better)
Translates to: EPLRPAAFSLFMARL*RPPCFQRLGLPSNS
Trigger: AGAGTTAGAAGGCAGACCTAGCCTTTGGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
3UTR GCA 90 bp CCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTaGTTCCAAAGGCTAGGTCTGCCTTCTAACTCTAGCCAGGCTGGA +
Preference number: 1 (lower is better)
Translates to: PAAFSLFMARLWRPP*FQRLGLPSNSSQAG
Trigger: TCCAGCCTGGCTAGAGTTAGAAGGCAGACCTAGCCTTTGGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
3UTR GCA 90 bp CAGAAGCTAGGCAGGCCTAATGGCCAGTCCAGGCAGGCCCTGGCTTaGCCTGCTCCAAAGTATGGAGATAGAGTCCCGGTAAGCACCAAA +
Preference number: 1 (lower is better)
Translates to: QKLGRPNGQSRQALA*PAPKYGDRVPVSTK
Trigger: TTTGGTGCTTACCGGGACTCTATCTCCATACTTTGGAGCAGGGCAAGCCAGGGCCTGCCTGGACTGGCCATTAGGCCTGCCTAGCTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
3UTR CCA 90 bp CAGCTGATATTTTTATTGGCCTTCCTGTCCTCTGGGAAACCGGTCTaGTCCCACCAGCTACCCATTCTCTCAACTGTTTCTGGGGAAAGG +
Preference number: 1 (lower is better)
Translates to: QLIFLLAFLSSGKPV*SHQLPILSTVSGER
Trigger: CCTTTCCCCAGAAACAGTTGAGAGAATGGGTAGCTGGTGGGACCAGACCGGTTTCCCAGAGGACAGGAAGGCCAATAAAAATATCAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268766.11
3UTR CCA 90 bp TACCCCATGATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTaGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCA +
Preference number: 1 (lower is better)
Translates to: YPMMTQSRRQLQVMP*APALFRAFRGEAIS
Trigger: TGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATCATGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
3UTR-3UTR GCA 90 bp GCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCACAGGCGTGAGCCACTaGGCCCGGCTGCCTTCAGCC +
Preference number: 2 (lower is better)
Translates to: ARLPSAFLWQGSGGHPASTGVSH*ARLPSA
Trigger: GGCTGAAGGCAGCCGGGCGCAGTGGCTCACGCCTGT...GGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
3UTR-3UTR CCA 90 bp CTCCCGGGGACCGCCCAGCCCCGGGCTATGCAGAAGCTAGGCAGGCCTAATGGCGGGGTTTCACCATGTTaGCCAGGCTGGCCTCAGTCT +
Preference number: 2 (lower is better)
Translates to: LPGTAQPRAMQKLGRPNGGVSPC*PGWPQS
Trigger: AGACTGAGGCCAGCCTGGCCAACATGGTGAAACCCC...GCCATTAGGCCTGCCTAGCTTCTGCATAGCCCGGGGCTGGGCGGTCCCCGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268766.11
3UTR-3UTR TCA 90 bp GAGACAGCGGTCTCGCTATGGTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAACCTGGGGACACTGACTaGAGGGAGGAAGGGGTAGGA +
Preference number: 2 (lower is better)
Translates to: ETAVSLWSPGWSPNSWPQPGDTD*REEGVG
Trigger: TCCTACCCCTTCCTCCCTTCAGTCAGTGTCCCCAGG...TTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGACCATAGCGAGACCGCTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268766.11
3UTR-3UTR GCA 90 bp CTCCCGGGGACCGCCCAGCCCCGGGCTATGCAGAAGCTAGGCAGGCCTAATGGCCATGCCTTGGGCACCTaGACTTTTCAGAGCATTCAG +
Preference number: 2 (lower is better)
Translates to: LPGTAQPRAMQKLGRPNGHALGT*TFQSIQ
Trigger: CTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATG...GCCATTAGGCCTGCCTAGCTTCTGCATAGCCCGGGGCTGGGCGGTCCCCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268766.11
3UTR-3UTR CCA 90 bp TCCTGTCCTCTGGGAAACCGGTCTGGTCCCACCAGCTACCCATTCTCTCAACTGACAGCGGTCTCGCTATaGTCCCCAGGCTGGTCTCCC +
Preference number: 2 (lower is better)
Translates to: SCPLGNRSGPTSYPFSQLTAVSL*SPGWSP
Trigger: GGGAGACCAGCCTGGGGACCATAGCGAGACCGCTGT...CAGTTGAGAGAATGGGTAGCTGGTGGGACCAGACCGGTTTCCCAGAGGACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
3UTR-3UTR TCA 90 bp CAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCAGGACCCTGGGGACACTaGCTGAAGGGAGGAAGGGGT +
Preference number: 2 (lower is better)
Translates to: QSRRQLQVMPWAPALFRAGPWGH*LKGGRG
Trigger: ACCCCTTCCTCCCTTCAGTCAGTGTCCCCAGGGTCC...TGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
3UTR-3UTR GCA 90 bp CTGCACCATTTCATAGCCCAGCAAAGCCTCCACAATGGTGGGCTGGCTGATGTCGGCCTAGGCACCCATTaGTGCCGCTGCCGAATGTCA +
Preference number: 2 (lower is better)
Translates to: LHHFIAQQSLHNGGLADVGLGTH*CRCRMS
Trigger: TGACATTCGGCAGCGGCAGCAATGGGTGCCTAGGCC...GACATCAGCCAGCCCACCATTGTGGAGGCTTTGCTGGGCTATGAAATGGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
3UTR-3UTR TCA 90 bp ACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCCCTGGGGACACTGACTaGAGGGAGGAAGGGGTAGGA +
Preference number: 2 (lower is better)
Translates to: TIQETAASHALGTCTFQSPGDTD*REEGVG
Trigger: TCCTACCCCTTCCTCCCTTCAGTCAGTGTCCCCAGG...GCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
3UTR-3UTR GCA 90 bp TGGCCTTCCTGTCCTCTGGGAAACCGGTCTGGTCCCACCAGCTACCCATTCTCTAATCCAGGAGACAGCTaGAAGTCATGCCTTGGGCAC +
Preference number: 2 (lower is better)
Translates to: WPSCPLGNRSGPTSYPFSNPGDS*KSCLGH
Trigger: GTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATT...AGAGAATGGGTAGCTGGTGGGACCAGACCGGTTTCCCAGAGGACAGGAAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
3UTR-3UTR CCA 90 bp ACCGGCTCATCTGTGACCGATCGAACAGCCAGGAGGGTGTTTCCATGGCAACAGGAAGCAATATCAGGGTaGTCCAGAGGTGAATCCGGG +
Preference number: 2 (lower is better)
Translates to: TGSSVTDRTARRVFPWQQEAISG*SRGESG
Trigger: CCCGGATTCACCTCTGGACCACCCTGATATTGCTTC...CTGTTGCCATGGAAACACCCTCCTGGCTGTTCGATCGGTCACAGATGAGCCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
3UTR-3UTR TCA 90 bp CAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATAGGACCCTGGGGACACTaGCTGAAGGGAGGAAGGGGT +
Preference number: 2 (lower is better)
Translates to: QVMPWAPALFRAFRGEAIGPWGH*LKGGRG
Trigger: ACCCCTTCCTCCCTTCAGTCAGTGTCCCCAGGGTCC...TATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
3UTR-3UTR GCA 90 bp TCAGAGGAGAAGCAATATCAGGGTGGTCCAGAGGTGAATCCGGGTGCCTCAGGGCATGCCTTGGGCACCTaGACTTTTCAGAGCATTCAG +
Preference number: 2 (lower is better)
Translates to: SEEKQYQGGPEVNPGASGHALGT*TFQSIQ
Trigger: CTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATG...CCCTGAGGCACCCGGATTCACCTCTGGACCACCCTGATATTGCTTCTCCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543014.1
3UTR-3UTR CCA 90 bp CAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCAGAAGCAATATCAGGGTaGTCCAGAGGTGAATCCGGG +
Preference number: 2 (lower is better)
Translates to: QSRRQLQVMPWAPALFRAEAISG*SRGESG
Trigger: CCCGGATTCACCTCTGGACCACCCTGATATTGCTTC...TGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
3UTR-3UTR CCA 90 bp GATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTTCCACAATGGTGGGCTaGCTGATGTCAGTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: DDTIQETAASHALGTCTFSTMVG*LMSVRL
Trigger: CAGCCTCACTGACATCAGCCAGCCCACCATTGTGGA...AAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543014.1
3UTR-3UTR GCA 90 bp GCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGACAGCTGCAAGTCATaGCTTGGGCACCTGCACTTT +
Preference number: 2 (lower is better)
Translates to: ALGTCTFQSIQRRSNIRVDSCKS*LGHLHF
Trigger: AAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTC...CACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
3UTR-3UTR TCA 90 bp GCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATGGGTTTTGCCAGCCCTaGTACCCCATGATGACACAA +
Preference number: 2 (lower is better)
Translates to: ASHALGTCTFQSIQRRSNGFCQP*YPMMTQ
Trigger: TTGTGTCATCATGGGGTATCAGGGCTGGCAAAACCC...ATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
3UTR-3UTR GCA 90 bp GACTTATTTTCTAACTGGGCTAGGGGAAAGGGTAGGGTCTGTGTGGAGCTACAGGACAGCTGCAAGTCATaGCTTGGGCACCTGCACTTT +
Preference number: 2 (lower is better)
Translates to: DLFSNWARGKGRVCVELQDSCKS*LGHLHF
Trigger: AAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTC...CTGTAGCTCCACACAGACCCTACCCTTTCCCCTAGCCCAGTTAGAAAATAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
3UTR CAA 90 bp ATACCCCATGATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTaGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATC +
Preference number: 2 (lower is better)
Translates to: IPHDDTIQETAASHA*GTCTFQSIQRRSNI
Trigger: GATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATCATGGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
3UTR-3UTR CCA 90 bp CTGATACCCCATGATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCGGTAGGAGAACAAAGTaGTTGAGGTTTCCATATCCA +
Preference number: 2 (lower is better)
Translates to: LIPHDDTIQETAASHALGGRRTK*LRFPYP
Trigger: TGGATATGGAAACCTCAACCACTTTGTTCTCCTACC...GCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATCATGGGGTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
3UTR-3UTR CCA 90 bp CAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCAGGTAGGAGAACAAAGTaGTTGAGGTTTCCATATCCA +
Preference number: 2 (lower is better)
Translates to: QSRRQLQVMPWAPALFRAGRRTK*LRFPYP
Trigger: TGGATATGGAAACCTCAACCACTTTGTTCTCCTACC...TGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
3UTR TCA 72 bp GAGGCAAGCCGACGTCTAGCAAATCCTGCCTCAGGATaGAAGTGTAGGGGAGGTGGCAGCACTCCCGGGGAC +
Preference number: 3 (lower is better)
Translates to: EASRRLANPASG*KCRGGGSTPGD
Trigger: GTCCCCGGGAGTGCTGCCACCTCCCCTACACTTTCATCCTGAGGCAGGATTTGCTAGACGTCGGCTTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
3UTR GCA 72 bp CCAGCGCGGATCTTTTCTGCAGCACTTAGTGACTCCTaGCCTCCTGCTGGGGAAGAGAGGCAAGCCGACGTC +
Preference number: 3 (lower is better)
Translates to: PARIFSAALSDS*PPAGEERQADV
Trigger: GACGTCGGCTTGCCTCTCTTCCCCAGCAGGAGGGCAGGAGTCACTAAGTGCTGCAGAAAAGATCCGCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
3UTR CCA 72 bp CCCAACTCCTGGCCACAAGGGATCAAGGGATCCTCCTaGCCAAAGCACTGCCTATGCAGGTGTGAGCCACCG +
Preference number: 3 (lower is better)
Translates to: PNSWPQGIKGSS*PKHCLCRCEPP
Trigger: CGGTGGCTCACACCTGCATAGGCAGTGCTTTGGCCAGGAGGATCCCTTGATCCCTTGTGGCCAGGAGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
3UTR CCA 72 bp GTCTCGCTATGGTCCCCAGGCTGGTCTCCCAACTCCTaGCCACAAGGGATCAAGGGATCCTCCTGGCCAAAG +
Preference number: 3 (lower is better)
Translates to: VSLWSPGWSPNS*PQGIKGSSWPK
Trigger: CTTTGGCCAGGAGGATCCCTTGATCCCTTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGACCATAGCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
3UTR CCA 72 bp TTGGTGGAGACAGCGGTCTCGCTATGGTCCCCAGGCTaGTCTCCCAACTCCTGGCCACAAGGGATCAAGGGA +
Preference number: 3 (lower is better)
Translates to: LVETAVSLWSPG*SPNSWPQGIKG
Trigger: TCCCTTGATCCCTTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGACCATAGCGAGACCGCTGTCTCCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
3UTR-3UTR CAA 90 bp CACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTGCAAGTCATGCCTaGGGCACCTGCACTTTTCAG +
Preference number: 3 (lower is better)
Translates to: HCARLPSAFLWQGSGGHPAASHA*GTCTFQ
Trigger: CTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGC...AGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
3UTR-3UTR CAA 90 bp GGGGACCGGCTCATCTGTGACCGATCGAACAGCCAGGAGGGTGTTTCCATGGCAAGCAGAGCAGGGGTTTaGCCAGCCCTGATACCCCAT +
Preference number: 3 (lower is better)
Translates to: GDRLICDRSNSQEGVSMASRAGV*PALIPH
Trigger: ATGGGGTATCAGGGCTGGCAAAACCCCTGCTCTGCT...TGCCATGGAAACACCCTCCTGGCTGTTCGATCGGTCACAGATGAGCCGGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543014.1
3UTR-3UTR CAA 90 bp CCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCAAAGCAGAGCAGGGGTTTaGCCAGCCCTGATACCCCAT +
Preference number: 3 (lower is better)
Translates to: PAAFSLFMARLWRPPCFQSRAGV*PALIPH
Trigger: ATGGGGTATCAGGGCTGGCAAAACCCCTGCTCTGCT...TTGGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
3UTR-3UTR CAA 90 bp CTGCACCATTTCATAGCCCAGCAAAGCCTCCACAATGGTGGGCTGGCTGATGTCTGGCCTAGGCACCCATaGCTGCCGCTGCCGAATGTC +
Preference number: 3 (lower is better)
Translates to: LHHFIAQQSLHNGGLADVWPRHP*LPLPNV
Trigger: GACATTCGGCAGCGGCAGCAATGGGTGCCTAGGCCA...GACATCAGCCAGCCCACCATTGTGGAGGCTTTGCTGGGCTATGAAATGGTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
3UTR-3UTR CAA 90 bp GCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGCTGCAAGTCATGCCTaGGGCACCTGCACTTTTCAG +
Preference number: 3 (lower is better)
Translates to: ALGTCTFQSIQRRSNIRVAASHA*GTCTFQ
Trigger: CTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGC...CACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
3UTR CCA 72 bp ATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTaGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAA +
Preference number: 3 (lower is better)
Translates to: MTQSRRQLQVMP*APALFRAFRGE
Trigger: TTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
3UTR CCA 72 bp TTTTTATTGGCCTTCCTGTCCTCTGGGAAACCGGTCTaGTCCCACCAGCTACCCATTCTCTCAACTGTTTCT +
Preference number: 3 (lower is better)
Translates to: FLLAFLSSGKPV*SHQLPILSTVS
Trigger: AGAAACAGTTGAGAGAATGGGTAGCTGGTGGGACCAGACCGGTTTCCCAGAGGACAGGAAGGCCAATAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268766.11
3UTR-3UTR CAA 90 bp CAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATAAGGAGAACAAAGTGGTaGAGGTTTCCATATCCAAGG +
Preference number: 3 (lower is better)
Translates to: QVMPWAPALFRAFRGEAIRRTKW*RFPYPR
Trigger: CCTTGGATATGGAAACCTCAACCACTTTGTTCTCCT...TATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp CTCCCGGGGACCGCCCAGCCCCGGGCTATGCAGAAGCTAGGCAGGCCTAATGGCCCCCAGGAAGGAGACTaGCTCCGCCTGCACCTAGGG +
Preference number: 4 (lower is better)
Translates to: LPGTAQPRAMQKLGRPNGPQEGD*LRLHLG
Trigger: CCCTAGGTGCAGGCGGAGGCAGTCTCCTTCCTGGGG...GCCATTAGGCCTGCCTAGCTTCTGCATAGCCCGGGGCTGGGCGGTCCCCGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp CTCCCGGGGACCGCCCAGCCCCGGGCTATGCAGAAGCTAGGCAGGCCTAATGGCCTGCCCACGTCGGTGTaGAGGTTGAGGAGGGCACGG +
Preference number: 4 (lower is better)
Translates to: LPGTAQPRAMQKLGRPNGLPTSV*RLRRAR
Trigger: CCGTGCCCTCCTCAACCTCCACACCGACGTGGGCAG...GCCATTAGGCCTGCCTAGCTTCTGCATAGCCCGGGGCTGGGCGGTCCCCGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp CTCCCGGGGACCGCCCAGCCCCGGGCTATGCAGAAGCTAGGCAGGCCTAATGGCTCCCCACAGGCCACGTaGTTGATGGTCACACCCGAC +
Preference number: 4 (lower is better)
Translates to: LPGTAQPRAMQKLGRPNGSPQAT*LMVTPD
Trigger: GTCGGGTGTGACCATCAAGCACGTGGCCTGTGGGGA...GCCATTAGGCCTGCCTAGCTTCTGCATAGCCCGGGGCTGGGCGGTCCCCGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp GTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAAGGGATCAAGGGATCCTCCTGTGGTGGTGGGATGGCTaGCCTCACAGGTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: VPRLVSQLLATRDQGILLWWWDG*PHRSPG
Trigger: CCCCGGGGACCTGTGAGGCCAGCCATCCCACCACCA...CAGGAGGATCCCTTGATCCCTTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp GAGACAGCGGTCTCGCTATGGTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAACTGCGTGCGCCCAGCTaGCACCTGGACCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: ETAVSLWSPGWSPNSWPQLRAPS*HLDHLC
Trigger: ACAGAGGTGGTCCAGGTGGCAGCTGGGCGCACGCAG...TTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGACCATAGCGAGACCGCTGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR TCA 90 bp GCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCGGGCAGGCTCCAGGCTaGGTAGACTCAGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: ARLPSAFLWQGSGGHPASGQAPG*VDSGPA
Trigger: AGCTGGTCCTGAGTCTACTCAGCCTGGAGCCTGCCC...GGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp CACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGGGCAGGCTCCAGGCTaGGTAGACTCAGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: HCARLPSAFLWQGSGGHPGQAPG*VDSGPA
Trigger: AGCTGGTCCTGAGTCTACTCAGCCTGGAGCCTGCCC...AGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp GAGCCACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACGTCGGTGTGGAGGTTaGGGAGGGCACGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: EPLRPAAFSLFMARLWRPRRCGG*GGHGCR
Trigger: TCTGCATCCGTGCCCTCCTCAACCTCCACACCGACG...TGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp TTTCACCATGTTGGCCAGGCTGGCCTCAGTCTACTGACCTCAAGTGATCCGCCCGACGCCCAGAGCGCGTaGCGCCGGCTTTCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: FHHVGQAGLSLLTSSDPPDAQSA*RRLSAC
Trigger: GCACGCAGAAAGCCGGCGTCACGCGCTCTGGGCGTC...GGGCGGATCACTTGAGGTCAGTAGACTGAGGCCAGCCTGGCCAACATGGTGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR TCA 90 bp GCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCCACAGGCCACGTGCTTaGTGGTCACACCCGACTGGC +
Preference number: 4 (lower is better)
Translates to: ARLPSAFLWQGSGGHPASHRPRA*WSHPTG
Trigger: GCCAGTCGGGTGTGACCATCAAGCACGTGGCCTGTG...GGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp CTCCCGGGGACCGCCCAGCCCCGGGCTATGCAGAAGCTAGGCAGGCCTAATGGCCCCACAGGCTACCATTaGCATCTTGATGCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: LPGTAQPRAMQKLGRPNGPTGYH*HLDALK
Trigger: CTTGAGGGCATCAAGATGGCAATGGTAGCCTGTGGG...GCCATTAGGCCTGCCTAGCTTCTGCATAGCCCGGGGCTGGGCGGTCCCCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp ATAGCCCAGCAAAGCCTCCACAATGGTGGGCTGGCTGATGTCAGTGAGGCTGCCTGTGCTCCCACTGGGTaGCCACACCCTGCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: IAQQSLHNGGLADVSEAACAPTG*PHPAAQ
Trigger: CTGGGCGGCAGGGTGTGGGCACCCAGTGGGAGCACA...GGCAGCCTCACTGACATCAGCCAGCCCACCATTGTGGAGGCTTTGCTGGGCTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR CCA 90 bp CACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTCGCCCAGCTGCCACCTaGACCACCTCTGTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: HCARLPSAFLWQGSGGHPRPAAT*TTSVLS
Trigger: GCTCAACACAGAGGTGGTCCAGGTGGCAGCTGGGCG...AGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp GTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAAGGGATCAAGGGATCCTCCTGTCCCCCAGGGAGAGGTaGTCCAGGCCCAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: VPRLVSQLLATRDQGILLSPRER*SRPSLL
Trigger: CAACAAGCTGGGCCTGGACCACCTCTCCCTGGGGGA...CAGGAGGATCCCTTGATCCCTTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp CCCTGCTTCCAAAGGCTAGGTCTGCCTTCTAACTCTAGCCAGGCTGGACCCTGGCTCCTGTGCTCCCACTaGGTGCCCACACCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PCFQRLGLPSNSSQAGPWLLCSH*VPTPCR
Trigger: GCGGCAGGGTGTGGGCACCCAGTGGGAGCACAGGAG...CCAGGGTCCAGCCTGGCTAGAGTTAGAAGGCAGACCTAGCCTTTGGAAGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR TCA 90 bp CCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCAAAGGGTGGTCCAGAGGTaGATCCGGGTGCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: PAAFSLFMARLWRPPCFQRVVQR*IRVPQG
Trigger: CCCCTGAGGCACCCGGATTCACCTCTGGACCACCCT...TTGGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp GTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAAGGGATCAAGGGATCCTCCTGCTGGCCTCAGTCTACTaGCCTCAAGTGATCCGCCCG +
Preference number: 4 (lower is better)
Translates to: VPRLVSQLLATRDQGILLLASVY*PQVIRP
Trigger: CGGGCGGATCACTTGAGGTCAGTAGACTGAGGCCAG...CAGGAGGATCCCTTGATCCCTTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp CCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCAATCTCTGCCCTCCGCATaGGGACACTGCCCACGTCGG +
Preference number: 4 (lower is better)
Translates to: PAAFSLFMARLWRPPCFQSLPSA*GHCPRR
Trigger: CCGACGTGGGCAGTGTCCGCATGCGGAGGGCAGAGA...TTGGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp GAGACAGCGGTCTCGCTATGGTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAATCCTGCTCCCTGTGTTaGTGGGGGCCACGGACTTCT +
Preference number: 4 (lower is better)
Translates to: ETAVSLWSPGWSPNSWPQSCSLC*WGPRTS
Trigger: AGAAGTCCGTGGCCCCCAGCAACACAGGGAGCAGGA...TTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGACCATAGCGAGACCGCTGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp ATGGTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAAGGGATCAAGGGATCCTCGGACACTGGTGGTCCTaGTCCCTGTGTTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: MVPRLVSQLLATRDQGILGHWWS*SLCCWG
Trigger: CCCCCAGCAACACAGGGAGCAGGACCACCAGTGTCC...GAGGATCCCTTGATCCCTTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGACCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp CCCTGCTTCCAAAGGCTAGGTCTGCCTTCTAACTCTAGCCAGGCTGGACCCTGGCTGAGTGGTGGCCGCTaGGCAGGCTCCAGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: PCFQRLGLPSNSSQAGPWLSGGR*AGSRLS
Trigger: ACTCAGCCTGGAGCCTGCCCAGCGGCCACCACTCAG...CCAGGGTCCAGCCTGGCTAGAGTTAGAAGGCAGACCTAGCCTTTGGAAGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp ATGGTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAAGGGATCAAGGGATCCTCGGCTGTGCCATGATGTaGCTGAGTGGTGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: MVPRLVSQLLATRDQGILGCAMM*LSGGRW
Trigger: CCAGCGGCCACCACTCAGCCACATCATGGCACAGCC...GAGGATCCCTTGATCCCTTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp GAGACAGCGGTCTCGCTATGGTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAATGCTCCCTGTGTTGCTaGGGGCCACGGACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ETAVSLWSPGWSPNSWPQCSLCC*GPRTSL
Trigger: CAGAGAAGTCCGTGGCCCCCAGCAACACAGGGAGCA...TTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGACCATAGCGAGACCGCTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp CACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTATGGTCACACCCGACTaGCCCTCCAGGAAACGCGAG +
Preference number: 4 (lower is better)
Translates to: HCARLPSAFLWQGSGGHPMVTPD*PSRKRE
Trigger: CTCGCGTTTCCTGGAGGGCCAGTCGGGTGTGACCAT...AGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp CCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCAAGGACCACCTCTGTGTTaGGCATTGGCAGCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: PAAFSLFMARLWRPPCFQGPPLC*ALAAAG
Trigger: CCCTGCGGCTGCCAATGCTCAACACAGAGGTGGTCC...TTGGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp CTGATACCCCATGATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCGACGCCCAGAGCGCGTaGCGCCGGCTTTCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: LIPHDDTIQETAASHALGDAQSA*RRLSAC
Trigger: GCACGCAGAAAGCCGGCGTCACGCGCTCTGGGCGTC...GCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATCATGGGGTATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp CCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCAAGGCAGTCACAGCAGCTaGGTGAGCAGTGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PAAFSLFMARLWRPPCFQGSHSS*VSSAQV
Trigger: GACCTGGGCACTGCTCACTCAGCTGCTGTGACTGCC...TTGGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR TCA 90 bp ATGGTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAAGGGATCAAGGGATCCTCGGACCGGCTCATCTGTaGCCGATCGAACAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: MVPRLVSQLLATRDQGILGPAHL*PIEQPG
Trigger: TCCTGGCTGTTCGATCGGTCACAGATGAGCCGGTCC...GAGGATCCCTTGATCCCTTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp CACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTTCTGGTTGTAGGGCTTaGCCTCACACAGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: HCARLPSAFLWQGSGGHPSGCRA*PHTAQG
Trigger: CCCCTGAGCTGTGTGAGGGCAAGCCCTACAACCAGA...AGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp CCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCAAGGACACTGGTGGTCCTaGTCCCTGTGTTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PAAFSLFMARLWRPPCFQGHWWS*SLCCWG
Trigger: CCCCCAGCAACACAGGGAGCAGGACCACCAGTGTCC...TTGGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp ACCGGCTCATCTGTGACCGATCGAACAGCCAGGAGGGTGTTTCCATGGCAACAGCCCCAGGAAGGAGACTaGCTCCGCCTGCACCTAGGG +
Preference number: 4 (lower is better)
Translates to: TGSSVTDRTARRVFPWQQPQEGD*LRLHLG
Trigger: CCCTAGGTGCAGGCGGAGGCAGTCTCCTTCCTGGGG...CTGTTGCCATGGAAACACCCTCCTGGCTGTTCGATCGGTCACAGATGAGCCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR CCA 90 bp GCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCCGAAGAAGTGCAGGATaGTCTCCTCCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ARLPSAFLWQGSGGHPASRRSAG*SPPPAG
Trigger: CCCTGCTGGAGGAGGAGACCATCCTGCACTTCTTCG...GGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp CTCTGGAGGCCACCCTGCTTCCAAAGGCTAGGTCTGCCTTCTAACTCTAGCCAGTGCTGGGGGCAGCTGTaGGACTCCCTGGTGCCTAGC +
Preference number: 4 (lower is better)
Translates to: LWRPPCFQRLGLPSNSSQCWGQL*DSLVPS
Trigger: GCTAGGCACCAGGGAGTCCCACAGCTGCCCCCAGCA...CTGGCTAGAGTTAGAAGGCAGACCTAGCCTTTGGAAGCAGGGTGGCCTCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp CACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTCCATGTTGGCCAGGCTaGCCTCAGTCTACTGACCTC +
Preference number: 4 (lower is better)
Translates to: HCARLPSAFLWQGSGGHPPCWPG*PQSTDL
Trigger: GAGGTCAGTAGACTGAGGCCAGCCTGGCCAACATGG...AGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp GCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCGCCCTGCAGGACAGATaGGGGCCTAAGGACAAAGAC +
Preference number: 4 (lower is better)
Translates to: ARLPSAFLWQGSGGHPASALQDR*GPKDKD
Trigger: GTCTTTGTCCTTAGGCCCCCATCTGTCCTGCAGGGC...GGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR TCA 90 bp GAGCCACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCATACAGCGCTTTTGGATaGACTCAGCCAGAGTGCCGC +
Preference number: 4 (lower is better)
Translates to: EPLRPAAFSLFMARLWRPYSAFG*TQPECR
Trigger: GCGGCACTCTGGCTGAGTTCATCCAAAAGCGCTGTA...TGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp GAGCCACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACTTGGCCAGGCACAGTaGGGATCATGGAGGAATCGA +
Preference number: 4 (lower is better)
Translates to: EPLRPAAFSLFMARLWRPLGQAQ*GSWRNR
Trigger: TCGATTCCTCCATGATCCTCACTGTGCCTGGCCAAG...TGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR TCA 90 bp CACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTAATCCTGCCTCAGGATaGAAGTGTAGGGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: HCARLPSAFLWQGSGGHPNPASG*KCRGGG
Trigger: GCCACCTCCCCTACACTTTCATCCTGAGGCAGGATT...AGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp ATGGTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAAGGGATCAAGGGATCCTCTCTGGTTGTAGGGCTTaGCCTCACACAGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: MVPRLVSQLLATRDQGILSGCRA*PHTAQG
Trigger: CCCCTGAGCTGTGTGAGGGCAAGCCCTACAACCAGA...GAGGATCCCTTGATCCCTTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp TTTCACCATGTTGGCCAGGCTGGCCTCAGTCTACTGACCTCAAGTGATCCGCCCAACTGGGGCTGTGGCTaGTCCACTGCCCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: FHHVGQAGLSLLTSSDPPNWGCG*STAPGR
Trigger: CCTTCCTGGGGCAGTGGAGCAGCCACAGCCCCAGTT...GGGCGGATCACTTGAGGTCAGTAGACTGAGGCCAGCCTGGCCAACATGGTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp TGGCCTTCCTGTCCTCTGGGAAACCGGTCTGGTCCCACCAGCTACCCATTCTCTGACCTCGCGCCCCTTTaGCCCAAGAGTACACTTCGC +
Preference number: 4 (lower is better)
Translates to: WPSCPLGNRSGPTSYPFSDLAPL*PKSTLR
Trigger: GCGAAGTGTACTCTTGGGGCAAAGGGGCGCGAGGTC...AGAGAATGGGTAGCTGGTGGGACCAGACCGGTTTCCCAGAGGACAGGAAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp CACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTTCCTGGCCAAAGCACTaGCTATGCAGGTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: HCARLPSAFLWQGSGGHPSWPKH*LCRCEP
Trigger: TGGCTCACACCTGCATAGGCAGTGCTTTGGCCAGGA...AGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp CAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCAGCACAGGCCTCCGCATaGGGACACTGCCCACGTCGG +
Preference number: 4 (lower is better)
Translates to: QSRRQLQVMPWAPALFRAAQASA*GHCPRR
Trigger: CCGACGTGGGCAGTGTCCGCATGCGGAGGCCTGTGC...TGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR CCA 90 bp GAGACAGCGGTCTCGCTATGGTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAAAGCCAGAGTGCCGCCTaGTGCATATTCCATGGCGAT +
Preference number: 4 (lower is better)
Translates to: ETAVSLWSPGWSPNSWPQSQSAA*CIFHGD
Trigger: ATCGCCATGGAATATGCACCAGGCGGCACTCTGGCT...TTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGACCATAGCGAGACCGCTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp GAGACAGCGGTCTCGCTATGGTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAACTTCAGCACCAGTGCTaGCAAGTTCGCAGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: ETAVSLWSPGWSPNSWPQLQHQC*QVRSLE
Trigger: TTCGAGGCTGCGAACTTGCCAGCACTGGTGCTGAAG...TTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGACCATAGCGAGACCGCTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp CTCTGGAGGCCACCCTGCTTCCAAAGGCTAGGTCTGCCTTCTAACTCTAGCCAGGGCTGTGCCATGATGTaGCTGAGTGGTGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LWRPPCFQRLGLPSNSSQGCAMM*LSGGRW
Trigger: CCAGCGGCCACCACTCAGCCACATCATGGCACAGCC...CTGGCTAGAGTTAGAAGGCAGACCTAGCCTTTGGAAGCAGGGTGGCCTCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp CCCTGCTTCCAAAGGCTAGGTCTGCCTTCTAACTCTAGCCAGGCTGGACCCTGGCTATGGTCCCCAGGCTaGTCTCCCAACTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PCFQRLGLPSNSSQAGPWLWSPG*SPNSWP
Trigger: TGGCCAGGAGTTGGGAGACCAGCCTGGGGACCATAG...CCAGGGTCCAGCCTGGCTAGAGTTAGAAGGCAGACCTAGCCTTTGGAAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp ATGGTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAAGGGATCAAGGGATCCTCAGCCTCCAGAGTAGCTaGGATTACAGGCGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: MVPRLVSQLLATRDQGILSLQSS*DYRRPS
Trigger: TGACGGGCGCCTGTAATCCCAGCTACTCTGGAGGCT...GAGGATCCCTTGATCCCTTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR TCA 90 bp ACCGGCTCATCTGTGACCGATCGAACAGCCAGGAGGGTGTTTCCATGGCAACAGCAGTCAGGCAGGCAGTaGAGAAGTCCCCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: TGSSVTDRTARRVFPWQQQSGRQ*RSPHRP
Trigger: TGGCCTGTGGGGACTTCTTCACTGCCTGCCTGACTG...CTGTTGCCATGGAAACACCCTCCTGGCTGTTCGATCGGTCACAGATGAGCCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR TCA 90 bp GAGCCACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACTACCATTGCCATCTTaGTGCCCTCAAGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: EPLRPAAFSLFMARLWRPLPLPS*CPQGLG
Trigger: TCCAAGGCCTTGAGGGCATCAAGATGGCAATGGTAG...TGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp TGGCCTTCCTGTCCTCTGGGAAACCGGTCTGGTCCCACCAGCTACCCATTCTCTGCACTCATTCTGGGCTaGCTGCCGCTCTTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: WPSCPLGNRSGPTSYPFSALILG*LPLFLG
Trigger: ACCAAGGAAGAGCGGCAGGCAGCCCAGAATGAGTGC...AGAGAATGGGTAGCTGGTGGGACCAGACCGGTTTCCCAGAGGACAGGAAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp GTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAAGGGATCAAGGGATCCTCCTGATCTGCACGAAGAAGTaGAGGATGGTCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VPRLVSQLLATRDQGILLICTKK*RMVSSS
Trigger: GGAGGAGGAGACCATCCTGCACTTCTTCGTGCAGAT...CAGGAGGATCCCTTGATCCCTTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp GAGCCACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCAATCTGCACGAAGAAGTaGAGGATGGTCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EPLRPAAFSLFMARLWRPICTKK*RMVSSS
Trigger: GGAGGAGGAGACCATCCTGCACTTCTTCGTGCAGAT...TGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp CTGATACCCCATGATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCCCCGGGGGATACCTCTaGAGCGGACACTGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LIPHDDTIQETAASHALGPGGYL*SGHWWS
Trigger: GGACCACCAGTGTCCGCTGCAGAGGTATCCCCCGGG...GCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATCATGGGGTATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp ACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCCCCGGGGGATACCTCTaGAGCGGACACTGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: TIQETAASHALGTCTFQSPGGYL*SGHWWS
Trigger: GGACCACCAGTGTCCGCTGCAGAGGTATCCCCCGGG...GCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp ATGGTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAAGGGATCAAGGGATCCTCCTCGGCGAGTATTGGTaGCCAACTGTCCGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: MVPRLVSQLLATRDQGILLGEYW*PTVRAD
Trigger: ATCAGCACGGACAGTTGGGCACCAATACTCGCCGAG...GAGGATCCCTTGATCCCTTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp GAGCCACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCAGACAGCTGCAAGTCATaGCTTGGGCACCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: EPLRPAAFSLFMARLWRPDSCKS*LGHLHF
Trigger: AAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTC...TGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp CCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCAACTCTGGAGGCCACCCTaGTTCCAAAGGCTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PAAFSLFMARLWRPPCFQLWRPP*FQRLGL
Trigger: CAGACCTAGCCTTTGGAAGCAGGGTGGCCTCCAGAG...TTGGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp GATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTACAGGCGTGAGCCACTaGGCCCGGCTGCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: DDTIQETAASHALGTCTFTGVSH*ARLPSA
Trigger: GGCTGAAGGCAGCCGGGCGCAGTGGCTCACGCCTGT...AAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp ACAGGACACGGAAGTCACCGTGTAAGGGTGTGTCTCATCCAACTGCACCATTTCACCGCTCGCTGTCCCTaGACAGGCCTCCGCATGCGG +
Preference number: 4 (lower is better)
Translates to: TGHGSHRVRVCLIQLHHFTARCP*TGLRMR
Trigger: CCGCATGCGGAGGCCTGTGCAGGGACAGCGAGCGGT...GAAATGGTGCAGTTGGATGAGACACACCCTTACACGGTGACTTCCGTGTCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR GCA 90 bp CCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCCAGAGGTTGGGTGCCCACACCCTaGCGCCCAGGACCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: PALFRAFRGEAISGWSRGWVPTP*RPGPLA
Trigger: AGCGAGCGGTCCTGGGCGGCAGGGTGTGGGCACCCA...ACCTCTGGACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR GCA 90 bp GCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCCCTGACATTCCTACATaGAGGAAGGGAGGACTTGCC +
Preference number: 4 (lower is better)
Translates to: ARLPSAFLWQGSGGHPASPDIPT*RKGGLA
Trigger: GGCAAGTCCTCCCTTCCTGCATGTAGGAATGTCAGG...GGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR CCA 90 bp CCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCAAAGCAGCTTGAGGACCTaGCACTCATTCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PAAFSLFMARLWRPPCFQSSLRT*HSFWAA
Trigger: GGCAGCCCAGAATGAGTGCCAGGTCCTCAAGCTGCT...TTGGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp ACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCCTGAGTGGTGGCCGCTaGGCAGGCTCCAGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: TIQETAASHALGTCTFQSLSGGR*AGSRLS
Trigger: ACTCAGCCTGGAGCCTGCCCAGCGGCCACCACTCAG...GCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp TCTGGTCCCACCAGCTACCCATTCTCTCAACTGTTTCTGGGGAAAGGCATGGGGCATGATGTGGCTGAGTaGTGGCCGCTGGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SGPTSYPFSQLFLGKGMGHDVAE*WPLGRL
Trigger: GAGCCTGCCCAGCGGCCACCACTCAGCCACATCATG...CCCCATGCCTTTCCCCAGAAACAGTTGAGAGAATGGGTAGCTGGTGGGACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp CTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCATGGTGGTGGGATGGCTaGCCTCACAGGTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LQVMPWAPALFRAFRGEAWWWDG*PHRSPG
Trigger: CCCCGGGGACCTGTGAGGCCAGCCATCCCACCACCA...TGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp ATGGTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAAGGGATCAAGGGATCCTCTCCACAATGGTGGGCTaGCTGATGTCAGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: MVPRLVSQLLATRDQGILSTMVG*LMSVRL
Trigger: CAGCCTCACTGACATCAGCCAGCCCACCATTGTGGA...GAGGATCCCTTGATCCCTTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp GCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCGAAGCAATATCAGGGTaGTCCAGAGGTGAATCCGGG +
Preference number: 4 (lower is better)
Translates to: ARLPSAFLWQGSGGHPASEAISG*SRGESG
Trigger: CCCGGATTCACCTCTGGACCACCCTGATATTGCTTC...GGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp GAGCCACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCAGAAGCAATATCAGGGTaGTCCAGAGGTGAATCCGGG +
Preference number: 4 (lower is better)
Translates to: EPLRPAAFSLFMARLWRPEAISG*SRGESG
Trigger: CCCGGATTCACCTCTGGACCACCCTGATATTGCTTC...TGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp TGGCCTTCCTGTCCTCTGGGAAACCGGTCTGGTCCCACCAGCTACCCATTCTCTGGGGTTTCACCATGTTaGCCAGGCTGGCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: WPSCPLGNRSGPTSYPFSGVSPC*PGWPQS
Trigger: AGACTGAGGCCAGCCTGGCCAACATGGTGAAACCCC...AGAGAATGGGTAGCTGGTGGGACCAGACCGGTTTCCCAGAGGACAGGAAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR TCA 90 bp TCTGGTCCCACCAGCTACCCATTCTCTCAACTGTTTCTGGGGAAAGGCATGGGGCCTCGAAAGCCCTCTTaGGGCTGGCCAGCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: SGPTSYPFSQLFLGKGMGPRKPS*GWPARR
Trigger: TCTACGAGCTGGCCAGCCTCAAGAGGGCTTTCGAGG...CCCCATGCCTTTCCCCAGAAACAGTTGAGAGAATGGGTAGCTGGTGGGACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR TCA 90 bp CTGATACCCCATGATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCCGTCGGTGTGGAGGTTaGGGAGGGCACGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: LIPHDDTIQETAASHALGRRCGG*GGHGCR
Trigger: TCTGCATCCGTGCCCTCCTCAACCTCCACACCGACG...GCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATCATGGGGTATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp CTGATACCCCATGATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCGGACCACCTCTGTGTTaGGCATTGGCAGCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: LIPHDDTIQETAASHALGGPPLC*ALAAAG
Trigger: CCCTGCGGCTGCCAATGCTCAACACAGAGGTGGTCC...GCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATCATGGGGTATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp TCTGGTCCCACCAGCTACCCATTCTCTCAACTGTTTCTGGGGAAAGGCATGGGGCCACATACAACTCGCTaGGCTTCCTGTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SGPTSYPFSQLFLGKGMGPHTTR*ASCPGG
Trigger: GCCCCCAGGACAGGAAGCTCAGCGAGTTGTATGTGG...CCCCATGCCTTTCCCCAGAAACAGTTGAGAGAATGGGTAGCTGGTGGGACCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp GCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCAGTGCAAGCAGGATCTaGACGAAGAAGTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: ARLPSAFLWQGSGGHPASSASRI*TKKCRM
Trigger: CATCCTGCACTTCTTCGTGCAGATCCTGCTTGCACT...GGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp CACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTAGTGCAAGCAGGATCTaGACGAAGAAGTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: HCARLPSAFLWQGSGGHPSASRI*TKKCRM
Trigger: CATCCTGCACTTCTTCGTGCAGATCCTGCTTGCACT...AGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp GCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCCCGGTCAGAGATAGGTaGAAAGGTGCCACTCATGAT +
Preference number: 4 (lower is better)
Translates to: ARLPSAFLWQGSGGHPASPVRDR*KGATHD
Trigger: ATCATGAGTGGCACCTTTGCACCTATCTCTGACCGG...GGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp CTGATACCCCATGATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCTCCGCATGCGGACACTaGCCACGTCGGTGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LIPHDDTIQETAASHALGSACGH*PRRCGG
Trigger: ACCTCCACACCGACGTGGGCAGTGTCCGCATGCGGA...GCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATCATGGGGTATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp GCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGTGTGGGACTCCCTGGTaGCTAGCCCCAGTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ALGTCTFQSIQRRSNIRVCGTPW*LAPVCR
Trigger: GCGGCAGACTGGGGCTAGGCACCAGGGAGTCCCACA...CACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp CTCTGGAGGCCACCCTGCTTCCAAAGGCTAGGTCTGCCTTCTAACTCTAGCCAGCTCTGGAGGCCACCCTaGTTCCAAAGGCTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LWRPPCFQRLGLPSNSSQLWRPP*FQRLGL
Trigger: CAGACCTAGCCTTTGGAAGCAGGGTGGCCTCCAGAG...CTGGCTAGAGTTAGAAGGCAGACCTAGCCTTTGGAAGCAGGGTGGCCTCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp TTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCACAGGCGTGAGCCACTaGGCCCGGCTGCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LGTCTFQSIQRRSNIRVVTGVSH*ARLPSA
Trigger: GGCTGAAGGCAGCCGGGCGCAGTGGCTCACGCCTGT...GACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp GACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGGCCTCAGACCTCCTGTaGTCCCACTGGGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: DTIQETAASHALGTCTFQASDLL*SHWVPT
Trigger: TGTGGGCACCCAGTGGGAGCACAGGAGGTCTGAGGC...CTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR CCA 90 bp CAGTGGTGCGATCTCGGCTCACTGCAAACTTCACCTCCCGGGTTCAAGGGATTCAGCAGCTTGAGGACCTaGCACTCATTCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QWCDLGSLQTSPPGFKGFSSLRT*HSFWAA
Trigger: GGCAGCCCAGAATGAGTGCCAGGTCCTCAAGCTGCT...GAATCCCTTGAACCCGGGAGGTGAAGTTTGCAGTGAGCCGAGATCGCACCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp GATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCTGCCCACGTCGGTGTaGAGGTTGAGGAGGGCACGG +
Preference number: 4 (lower is better)
Translates to: DDTIQETAASHALGTCTFLPTSV*RLRRAR
Trigger: CCGTGCCCTCCTCAACCTCCACACCGACGTGGGCAG...AAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp TTTCACCATGTTGGCCAGGCTGGCCTCAGTCTACTGACCTCAAGTGATCCGCCCTGCCTCGGCGAGTATTaGTGCCCAACTGTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: FHHVGQAGLSLLTSSDPPCLGEY*CPTVRA
Trigger: AGCACGGACAGTTGGGCACCAATACTCGCCGAGGCA...GGGCGGATCACTTGAGGTCAGTAGACTGAGGCCAGCCTGGCCAACATGGTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
3UTR CAA 72 bp CTGATGTCAGTGAGGCTGCCATGGCCTAGGCACCCATaGCTGCCGCTGCCGAATGTCATGATGATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LMSVRLPWPRHP*LPLPNVMMMPL
Trigger: CAGAGGCATCATCATGACATTCGGCAGCGGCAGCAATGGGTGCCTAGGCCATGGCAGCCTCACTGACATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR TCA 90 bp ACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCCAGTCAGGCAGGCAGTaGAGAAGTCCCCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: TIQETAASHALGTCTFQSQSGRQ*RSPHRP
Trigger: TGGCCTGTGGGGACTTCTTCACTGCCTGCCTGACTG...GCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp CATTTCATAGCCCAGCAAAGCCTCCACAATGGTGGGCTGGCTGATGTCAGTGAGGGACCGGCTCATCTGTaGCCGATCGAACAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: HFIAQQSLHNGGLADVSEGPAHL*PIEQPG
Trigger: TCCTGGCTGTTCGATCGGTCACAGATGAGCCGGTCC...CTCACTGACATCAGCCAGCCCACCATTGTGGAGGCTTTGCTGGGCTATGAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR TCA 90 bp TTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCAGGGTGGTCCAGAGGTaGATCCGGGTGCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LGTCTFQSIQRRSNIRVVRVVQR*IRVPQG
Trigger: CCCCTGAGGCACCCGGATTCACCTCTGGACCACCCT...GACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp CCCTGCTTCCAAAGGCTAGGTCTGCCTTCTAACTCTAGCCAGGCTGGACCCTGGGGGTTTTGCCAGCCCTaGTACCCCATGATGACACAA +
Preference number: 4 (lower is better)
Translates to: PCFQRLGLPSNSSQAGPWGFCQP*YPMMTQ
Trigger: TTGTGTCATCATGGGGTATCAGGGCTGGCAAAACCC...CCAGGGTCCAGCCTGGCTAGAGTTAGAAGGCAGACCTAGCCTTTGGAAGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp GATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTGGACCCTGGGGACACTaGCTGAAGGGAGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: DDTIQETAASHALGTCTFGPWGH*LKGGRG
Trigger: ACCCCTTCCTCCCTTCAGTCAGTGTCCCCAGGGTCC...AAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp CATTTCATAGCCCAGCAAAGCCTCCACAATGGTGGGCTGGCTGATGTCAGTGAGTCCTGCTCCCTGTGTTaGTGGGGGCCACGGACTTCT +
Preference number: 4 (lower is better)
Translates to: HFIAQQSLHNGGLADVSESCSLC*WGPRTS
Trigger: AGAAGTCCGTGGCCCCCAGCAACACAGGGAGCAGGA...CTCACTGACATCAGCCAGCCCACCATTGTGGAGGCTTTGCTGGGCTATGAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR GCA 90 bp GCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGAACTGGGGCTGTGGCTaGTCCACTGCCCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ALGTCTFQSIQRRSNIRVNWGCG*STAPGR
Trigger: CCTTCCTGGGGCAGTGGAGCAGCCACAGCCCCAGTT...CACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp CTGATACCCCATGATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCTTGGACCTTACAGGGTaGCCGACTGCCTCGGCGAGT +
Preference number: 4 (lower is better)
Translates to: LIPHDDTIQETAASHALGLDLTG*PTASAS
Trigger: ACTCGCCGAGGCAGTCGGGCACCCTGTAAGGTCCAA...GCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATCATGGGGTATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp CTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAGGCCACGGACTTCTCTaGCCTGCAGGACAGATGGGG +
Preference number: 4 (lower is better)
Translates to: LQVMPWAPALFRAFRGEAGHGLL*PAGQMG
Trigger: CCCCATCTGTCCTGCAGGGCAGAGAAGTCCGTGGCC...TGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR CCA 90 bp TTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCGATGTGGCTGAGTGGTaGCCGCTGGGCAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LGTCTFQSIQRRSNIRVVDVAEW*PLGRLQ
Trigger: CTGGAGCCTGCCCAGCGGCCACCACTCAGCCACATC...GACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp CTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTGATGTGGCTGAGTGGTaGCCGCTGGGCAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LGHLHFSEHSEEKQYQGGDVAEW*PLGRLQ
Trigger: CTGGAGCCTGCCCAGCGGCCACCACTCAGCCACATC...ACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp CTGATACCCCATGATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCCTCTGCAGCGGACACTaGTGGTCCTGCTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LIPHDDTIQETAASHALGLCSGH*WSCSLC
Trigger: ACACAGGGAGCAGGACCACCAGTGTCCGCTGCAGAG...GCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATCATGGGGTATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp GATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTACAGCGGTCTCGCTATaGTCCCCAGGCTGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: DDTIQETAASHALGTCTFTAVSL*SPGWSP
Trigger: GGGAGACCAGCCTGGGGACCATAGCGAGACCGCTGT...AAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp CAGTGGTGCGATCTCGGCTCACTGCAAACTTCACCTCCCGGGTTCAAGGGATTCTCTGGGAAACCGGTCTaGTCCCACCAGCTACCCATT +
Preference number: 4 (lower is better)
Translates to: QWCDLGSLQTSPPGFKGFSGKPV*SHQLPI
Trigger: AATGGGTAGCTGGTGGGACCAGACCGGTTTCCCAGA...GAATCCCTTGAACCCGGGAGGTGAAGTTTGCAGTGAGCCGAGATCGCACCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR TCA 90 bp GACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGGGTCTCGGTGCAGGATaGGGTGGGTGTGCACATGAT +
Preference number: 4 (lower is better)
Translates to: DTIQETAASHALGTCTFQGLGAG*GGCAHD
Trigger: ATCATGTGCACACCCACCTCATCCTGCACCGAGACC...CTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp CTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCACCTCGAAAGCCCTCTTaGGGCTGGCCAGCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: LQVMPWAPALFRAFRGEAPRKPS*GWPARR
Trigger: TCTACGAGCTGGCCAGCCTCAAGAGGGCTTTCGAGG...TGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp CAGTGGTGCGATCTCGGCTCACTGCAAACTTCACCTCCCGGGTTCAAGGGATTCCAAAGGTGCCACTCATaGTCTTCAGCACCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: QWCDLGSLQTSPPGFKGFQRCHS*SSAPVL
Trigger: CAGCACTGGTGCTGAAGATCATGAGTGGCACCTTTG...GAATCCCTTGAACCCGGGAGGTGAAGTTTGCAGTGAGCCGAGATCGCACCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR TCA 90 bp CTCTGGAGGCCACCCTGCTTCCAAAGGCTAGGTCTGCCTTCTAACTCTAGCCAGCAAAGGTGCCACTCATaGTCTTCAGCACCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LWRPPCFQRLGLPSNSSQQRCHS*SSAPVL
Trigger: CAGCACTGGTGCTGAAGATCATGAGTGGCACCTTTG...CTGGCTAGAGTTAGAAGGCAGACCTAGCCTTTGGAAGCAGGGTGGCCTCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp GACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGACCCCAGGCATACACTaGCGACAGTGGTGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: DTIQETAASHALGTCTFQTPGIH*RQWWWD
Trigger: ATCCCACCACCACTGTCGTCAGTGTATGCCTGGGGT...CTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp CCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCCAGAGGTCACAGGCCACGTGCTTaGTGGTCACACCCGACTGGC +
Preference number: 4 (lower is better)
Translates to: PALFRAFRGEAISGWSRGHRPRA*WSHPTG
Trigger: GCCAGTCGGGTGTGACCATCAAGCACGTGGCCTGTG...ACCTCTGGACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp GATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCCTGGGGACACTGACTaGAGGGAGGAAGGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: DDTIQETAASHALGTCTFPGDTD*REEGVG
Trigger: TCCTACCCCTTCCTCCCTTCAGTCAGTGTCCCCAGG...AAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp TTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCGGACCCTGGGGACACTaGCTGAAGGGAGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LGTCTFQSIQRRSNIRVVGPWGH*LKGGRG
Trigger: ACCCCTTCCTCCCTTCAGTCAGTGTCCCCAGGGTCC...GACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp CCCTGCTTCCAAAGGCTAGGTCTGCCTTCTAACTCTAGCCAGGCTGGACCCTGGGGACAAAGACCCTCCTaGCATTCCTACATGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PCFQRLGLPSNSSQAGPWGQRPS*HSYMQE
Trigger: TTCCTGCATGTAGGAATGTCAGGAGGGTCTTTGTCC...CCAGGGTCCAGCCTGGCTAGAGTTAGAAGGCAGACCTAGCCTTTGGAAGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR GCA 90 bp CTGCACCATTTCATAGCCCAGCAAAGCCTCCACAATGGTGGGCTGGCTGATGTCTTTCGCAGGCACAGGTaGACAATCCCGAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: LHHFIAQQSLHNGGLADVFRRHR*TIPKAP
Trigger: AGGTGCCTTCGGGATTGTGCACCTGTGCCTGCGAAA...GACATCAGCCAGCCCACCATTGTGGAGGCTTTGCTGGGCTATGAAATGGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR GCA 90 bp ATAGCCCAGCAAAGCCTCCACAATGGTGGGCTGGCTGATGTCAGTGAGGCTGCCGTGCACATGATGCAGTaGAAGCAGGATCTGCACGAA +
Preference number: 4 (lower is better)
Translates to: IAQQSLHNGGLADVSEAAVHMMQ*KQDLHE
Trigger: TTCGTGCAGATCCTGCTTGCACTGCATCATGTGCAC...GGCAGCCTCACTGACATCAGCCAGCCCACCATTGTGGAGGCTTTGCTGGGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR GCA 90 bp CTGCACCATTTCATAGCCCAGCAAAGCCTCCACAATGGTGGGCTGGCTGATGTCGATCTTCAGCACCAGTaGTGGCAAGTTCGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LHHFIAQQSLHNGGLADVDLQHQ*WQVRSL
Trigger: GAGGCTGCGAACTTGCCAGCACTGGTGCTGAAGATC...GACATCAGCCAGCCCACCATTGTGGAGGCTTTGCTGGGCTATGAAATGGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR GCA 90 bp CTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTTCCGCATGCGGACACTaGCCACGTCGGTGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LGHLHFSEHSEEKQYQGGSACGH*PRRCGG
Trigger: ACCTCCACACCGACGTGGGCAGTGTCCGCATGCGGA...ACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp CTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTGGCCACGGACTTCTCTaGCCTCCGCATGCGGACACT +
Preference number: 4 (lower is better)
Translates to: LGHLHFSEHSEEKQYQGGGHGLL*PPHADT
Trigger: AGTGTCCGCATGCGGAGGGCAGAGAAGTCCGTGGCC...ACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp CAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATACTGCGTGCGCCCAGCTaGCACCTGGACCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: QVMPWAPALFRAFRGEAILRAPS*HLDHLC
Trigger: ACAGAGGTGGTCCAGGTGGCAGCTGGGCGCACGCAG...TATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp CTCTGGAGGCCACCCTGCTTCCAAAGGCTAGGTCTGCCTTCTAACTCTAGCCAGCAGCTGAGTGAGCAGTaGCCAGGTCTATACTCAGCA +
Preference number: 4 (lower is better)
Translates to: LWRPPCFQRLGLPSNSSQQLSEQ*PGLYSA
Trigger: TGCTGAGTATAGACCTGGGCACTGCTCACTCAGCTG...CTGGCTAGAGTTAGAAGGCAGACCTAGCCTTTGGAAGCAGGGTGGCCTCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp GCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGTACAGGGTGCCCGACTaGCTCGGCGAGTATTGGTGC +
Preference number: 4 (lower is better)
Translates to: ALGTCTFQSIQRRSNIRVYRVPD*LGEYWC
Trigger: GCACCAATACTCGCCGAGGCAGTCGGGCACCCTGTA...CACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp CAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCAGCACTTAGTGACTCCTaGCCTCCTGCTGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: QSRRQLQVMPWAPALFRAALSDS*PPAGEE
Trigger: CTCTTCCCCAGCAGGAGGGCAGGAGTCACTAAGTGC...TGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp GATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCCCCAGGTTTCCCTCTaGCTCAGACCTCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: DDTIQETAASHALGTCTFPQVSL*LRPPVL
Trigger: GAGCACAGGAGGTCTGAGGCAGAGGGAAACCTGGGG...AAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR GCA 90 bp CTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCACGGACTTCTCTGCCCTaGAGGACAGATGGGGGCCTA +
Preference number: 4 (lower is better)
Translates to: LQVMPWAPALFRAFRGEARTSLP*RTDGGL
Trigger: TAGGCCCCCATCTGTCCTGCAGGGCAGAGAAGTCCG...TGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR CCA 90 bp TTTCACCATGTTGGCCAGGCTGGCCTCAGTCTACTGACCTCAAGTGATCCGCCCATGATCACCAGCTTCTaGTCAGCCTTTCGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: FHHVGQAGLSLLTSSDPPMITSF*SAFRRH
Trigger: GTGCCTGCGAAAGGCTGACCAGAAGCTGGTGATCAT...GGGCGGATCACTTGAGGTCAGTAGACTGAGGCCAGCCTGGCCAACATGGTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp GCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATCATGATGTGGCTGAGTaGTGGCCGCTGGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ASHALGTCTFQSIQRRSNHDVAE*WPLGRL
Trigger: GAGCCTGCCCAGCGGCCACCACTCAGCCACATCATG...ATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp GCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGTGCTCCCTGTGTTGCTaGGGGCCACGGACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ALGTCTFQSIQRRSNIRVCSLCC*GPRTSL
Trigger: CAGAGAAGTCCGTGGCCCCCAGCAACACAGGGAGCA...CACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp GCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGCTCTGCAGCGGACACTaGTGGTCCTGCTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: ALGTCTFQSIQRRSNIRVLCSGH*WSCSLC
Trigger: ACACAGGGAGCAGGACCACCAGTGTCCGCTGCAGAG...CACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp GCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATCGCCCAGCTGCCACCTaGACCACCTCTGTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: ASHALGTCTFQSIQRRSNRPAAT*TTSVLS
Trigger: GCTCAACACAGAGGTGGTCCAGGTGGCAGCTGGGCG...ATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp GACTTATTTTCTAACTGGGCTAGGGGAAAGGGTAGGGTCTGTGTGGAGCTACAGCTGAGCTTCCTGTCCTaGGGGCATGGGCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: DLFSNWARGKGRVCVELQLSFLS*GHGHLL
Trigger: CAGCAGGTGCCCATGCCCCCAGGACAGGAAGCTCAG...CTGTAGCTCCACACAGACCCTACCCTTTCCCCTAGCCCAGTTAGAAAATAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp GACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGATGCCCTCAAGGCCTTaGACCTTACAGGGTGCCCGA +
Preference number: 4 (lower is better)
Translates to: DTIQETAASHALGTCTFQMPSRP*TLQGAR
Trigger: TCGGGCACCCTGTAAGGTCCAAGGCCTTGAGGGCAT...CTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp GCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGCTCATCCAACTGCACTaGCCGAGGGAGTCCGGCATC +
Preference number: 4 (lower is better)
Translates to: ALGTCTFQSIQRRSNIRVLIQLH*PRESGI
Trigger: GATGCCGGACTCCCTCGGCCAGTGCAGTTGGATGAG...CACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp TCTGGTCCCACCAGCTACCCATTCTCTCAACTGTTTCTGGGGAAAGGCATGGGGTTCTGTCGCCCAGGCTaGAGGGGTTTACGCCATTCT +
Preference number: 4 (lower is better)
Translates to: SGPTSYPFSQLFLGKGMGFCRPG*RGLRHS
Trigger: AGAATGGCGTAAACCCCTCCAGCCTGGGCGACAGAA...CCCCATGCCTTTCCCCAGAAACAGTTGAGAGAATGGGTAGCTGGTGGGACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR TCA 90 bp CATTTCATAGCCCAGCAAAGCCTCCACAATGGTGGGCTGGCTGATGTCAGTGAGAGGTGGGTGTGCACATaGTGCAGTGCAAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: HFIAQQSLHNGGLADVSERWVCT*CSASRI
Trigger: GATCCTGCTTGCACTGCATCATGTGCACACCCACCT...CTCACTGACATCAGCCAGCCCACCATTGTGGAGGCTTTGCTGGGCTATGAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR TCA 90 bp GCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATCCTGGGGACACTGACTaGAGGGAGGAAGGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: ASHALGTCTFQSIQRRSNPGDTD*REEGVG
Trigger: TCCTACCCCTTCCTCCCTTCAGTCAGTGTCCCCAGG...ATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp CTGATACCCCATGATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCTTTCGCAGGCACAGGTaGACAATCCCGAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: LIPHDDTIQETAASHALGFRRHR*TIPKAP
Trigger: AGGTGCCTTCGGGATTGTGCACCTGTGCCTGCGAAA...GCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATCATGGGGTATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp ACAGGACACGGAAGTCACCGTGTAAGGGTGTGTCTCATCCAACTGCACCATTTCGCACTCATTCTGGGCTaGCTGCCGCTCTTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: TGHGSHRVRVCLIQLHHFALILG*LPLFLG
Trigger: ACCAAGGAAGAGCGGCAGGCAGCCCAGAATGAGTGC...GAAATGGTGCAGTTGGATGAGACACACCCTTACACGGTGACTTCCGTGTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR GCA 90 bp TCTGGTCCCACCAGCTACCCATTCTCTCAACTGTTTCTGGGGAAAGGCATGGGGCAGAGTGCCGCCTGGTaGATATTCCATGGCGATCAT +
Preference number: 4 (lower is better)
Translates to: SGPTSYPFSQLFLGKGMGQSAAW*IFHGDH
Trigger: ATGATCGCCATGGAATATGCACCAGGCGGCACTCTG...CCCCATGCCTTTCCCCAGAAACAGTTGAGAGAATGGGTAGCTGGTGGGACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp TCCTGTCCTCTGGGAAACCGGTCTGGTCCCACCAGCTACCCATTCTCTCAACTGGTGCACATGATGCAGTaGAAGCAGGATCTGCACGAA +
Preference number: 4 (lower is better)
Translates to: SCPLGNRSGPTSYPFSQLVHMMQ*KQDLHE
Trigger: TTCGTGCAGATCCTGCTTGCACTGCATCATGTGCAC...CAGTTGAGAGAATGGGTAGCTGGTGGGACCAGACCGGTTTCCCAGAGGACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp GCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATTCCCCACAGGCCACGTaGTTGATGGTCACACCCGAC +
Preference number: 4 (lower is better)
Translates to: ASHALGTCTFQSIQRRSNSPQAT*LMVTPD
Trigger: GTCGGGTGTGACCATCAAGCACGTGGCCTGTGGGGA...ATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp CCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCCAGAGGTGGCCTAGGCACCCATTaGTGCCGCTGCCGAATGTCA +
Preference number: 4 (lower is better)
Translates to: PALFRAFRGEAISGWSRGGLGTH*CRCRMS
Trigger: TGACATTCGGCAGCGGCAGCAATGGGTGCCTAGGCC...ACCTCTGGACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp CTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTGGCCTAGGCACCCATTaGTGCCGCTGCCGAATGTCA +
Preference number: 4 (lower is better)
Translates to: LGHLHFSEHSEEKQYQGGGLGTH*CRCRMS
Trigger: TGACATTCGGCAGCGGCAGCAATGGGTGCCTAGGCC...ACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp TCTGGTCCCACCAGCTACCCATTCTCTCAACTGTTTCTGGGGAAAGGCATGGGGGACAGCTGCAAGTCATaGCTTGGGCACCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: SGPTSYPFSQLFLGKGMGDSCKS*LGHLHF
Trigger: AAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTC...CCCCATGCCTTTCCCCAGAAACAGTTGAGAGAATGGGTAGCTGGTGGGACCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp TCCTGTCCTCTGGGAAACCGGTCTGGTCCCACCAGCTACCCATTCTCTCAACTGTTTGAGAGGGAGACTTaGTCTGTCATCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SCPLGNRSGPTSYPFSQLFERET*SVIQAG
Trigger: TCCAGCCTGGATGACAGAGCAAGTCTCCCTCTCAAA...CAGTTGAGAGAATGGGTAGCTGGTGGGACCAGACCGGTTTCCCAGAGGACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp ACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATAGTTCTCGCTCAGTaGACAGGGCCAGCACGTGAG +
Preference number: 4 (lower is better)
Translates to: TIQETAASHALGTCTFQSIVLAQ*TGPARE
Trigger: CTCACGTGCTGGCCCTGTCCACTGAGCGAGAACTAT...GCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp CCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCCAGAGGTGGCCTTCCTGTCCTCTaGGAAACCGGTCTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PALFRAFRGEAISGWSRGGLPVL*ETGLVP
Trigger: TGGGACCAGACCGGTTTCCCAGAGGACAGGAAGGCC...ACCTCTGGACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR TCA 90 bp GCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATACCCCAGGCATACACTaGCGACAGTGGTGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: ASHALGTCTFQSIQRRSNTPGIH*RQWWWD
Trigger: ATCCCACCACCACTGTCGTCAGTGTATGCCTGGGGT...ATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp ACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCGGGTTTTGCCAGCCCTaGTACCCCATGATGACACAA +
Preference number: 4 (lower is better)
Translates to: TIQETAASHALGTCTFQSGFCQP*YPMMTQ
Trigger: TTGTGTCATCATGGGGTATCAGGGCTGGCAAAACCC...GCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp GACTTATTTTCTAACTGGGCTAGGGGAAAGGGTAGGGTCTGTGTGGAGCTACAGTGTGTCTCATCCAACTaGACTGGCCGAGGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: DLFSNWARGKGRVCVELQCVSSN*TGRGSP
Trigger: CGGACTCCCTCGGCCAGTGCAGTTGGATGAGACACA...CTGTAGCTCCACACAGACCCTACCCTTTCCCCTAGCCCAGTTAGAAAATAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp TTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCAGGCAGGCCCTGGCTTaGCCTGCTCCAAAGTATGGA +
Preference number: 4 (lower is better)
Translates to: LGTCTFQSIQRRSNIRVVRQALA*PAPKYG
Trigger: TCCATACTTTGGAGCAGGGCAAGCCAGGGCCTGCCT...GACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp CATTTCATAGCCCAGCAAAGCCTCCACAATGGTGGGCTGGCTGATGTCAGTGAGATGATCACCAGCTTCTaGTCAGCCTTTCGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: HFIAQQSLHNGGLADVSEMITSF*SAFRRH
Trigger: GTGCCTGCGAAAGGCTGACCAGAAGCTGGTGATCAT...CTCACTGACATCAGCCAGCCCACCATTGTGGAGGCTTTGCTGGGCTATGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR CCA 90 bp GATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTAGCCAGAGTGCCGCCTaGTGCATATTCCATGGCGAT +
Preference number: 4 (lower is better)
Translates to: DDTIQETAASHALGTCTFSQSAA*CIFHGD
Trigger: ATCGCCATGGAATATGCACCAGGCGGCACTCTGGCT...AAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp CCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCCAGAGGTCGAAGAAGTGCAGGATaGTCTCCTCCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PALFRAFRGEAISGWSRGRRSAG*SPPPAG
Trigger: CCCTGCTGGAGGAGGAGACCATCCTGCACTTCTTCG...ACCTCTGGACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp GCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGCTTCAGCACCAGTGCTaGCAAGTTCGCAGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: ALGTCTFQSIQRRSNIRVLQHQC*QVRSLE
Trigger: TTCGAGGCTGCGAACTTGCCAGCACTGGTGCTGAAG...CACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp GATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTAAACGCGAGATGAACTaGGGCTGTGGCTGCTCCACT +
Preference number: 4 (lower is better)
Translates to: DDTIQETAASHALGTCTFKREMN*GCGCST
Trigger: AGTGGAGCAGCCACAGCCCCAGTTCATCTCGCGTTT...AAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp CAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATAATGGTCACACCCGACTaGCCCTCCAGGAAACGCGAG +
Preference number: 4 (lower is better)
Translates to: QVMPWAPALFRAFRGEAIMVTPD*PSRKRE
Trigger: CTCGCGTTTCCTGGAGGGCCAGTCGGGTGTGACCAT...TATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp GATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTAGGGTAGGGTCTGTGTaGAGCTACAGCTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: DDTIQETAASHALGTCTFRVGSV*SYSCLQ
Trigger: CTGAAGGCAGCTGTAGCTCCACACAGACCCTACCCT...AAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR TCA 90 bp GCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATTACAGCGCTTTTGGATaGACTCAGCCAGAGTGCCGC +
Preference number: 4 (lower is better)
Translates to: ASHALGTCTFQSIQRRSNYSAFG*TQPECR
Trigger: GCGGCACTCTGGCTGAGTTCATCCAAAAGCGCTGTA...ATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp GACTTATTTTCTAACTGGGCTAGGGGAAAGGGTAGGGTCTGTGTGGAGCTACAGAGGTGGGTGTGCACATaGTGCAGTGCAAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: DLFSNWARGKGRVCVELQRWVCT*CSASRI
Trigger: GATCCTGCTTGCACTGCATCATGTGCACACCCACCT...CTGTAGCTCCACACAGACCCTACCCTTTCCCCTAGCCCAGTTAGAAAATAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR TCA 90 bp CATTTCATAGCCCAGCAAAGCCTCCACAATGGTGGGCTGGCTGATGTCAGTGAGCGAAATCACCGATCTTaGCGACCATGCGGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: HFIAQQSLHNGGLADVSERNHRS*RPCGVC
Trigger: ACAAACACCGCATGGTCGTCAAGATCGGTGATTTCG...CTCACTGACATCAGCCAGCCCACCATTGTGGAGGCTTTGCTGGGCTATGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR TCA 90 bp GCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATGTCACAGCAGCTGAGTaGGCAGTGCCCAGGTCTATA +
Preference number: 4 (lower is better)
Translates to: ASHALGTCTFQSIQRRSNVTAAE*AVPRSI
Trigger: TATAGACCTGGGCACTGCTCACTCAGCTGCTGTGAC...ATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp TTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCGATCTTCAGCACCAGTaGTGGCAAGTTCGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LGTCTFQSIQRRSNIRVVDLQHQ*WQVRSL
Trigger: GAGGCTGCGAACTTGCCAGCACTGGTGCTGAAGATC...GACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp TCAGAGGAGAAGCAATATCAGGGTGGTCCAGAGGTGAATCCGGGTGCCTCAGGGGAATTACAGCGCTTTTaGATGAACTCAGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SEEKQYQGGPEVNPGASGELQRF*MNSARV
Trigger: CACTCTGGCTGAGTTCATCCAAAAGCGCTGTAATTC...CCCTGAGGCACCCGGATTCACCTCTGGACCACCCTGATATTGCTTCTCCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR CCA 90 bp CTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTAAACGCGAGATGAACTaGGGCTGTGGCTGCTCCACT +
Preference number: 4 (lower is better)
Translates to: LGHLHFSEHSEEKQYQGGKREMN*GCGCST
Trigger: AGTGGAGCAGCCACAGCCCCAGTTCATCTCGCGTTT...ACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp TTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCTCCACAATGGTGGGCTaGCTGATGTCAGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGTCTFQSIQRRSNIRVVSTMVG*LMSVRL
Trigger: CAGCCTCACTGACATCAGCCAGCCCACCATTGTGGA...GACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp GACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGGTCCGTGCTGATTGCTaGCAAAAGTGTAGCAATCAC +
Preference number: 4 (lower is better)
Translates to: DTIQETAASHALGTCTFQVRADC*QKCSNH
Trigger: GTGATTGCTACACTTTTGGCAGCAATCAGCACGGAC...CTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR GCA 90 bp ACAGGACACGGAAGTCACCGTGTAAGGGTGTGTCTCATCCAACTGCACCATTTCCATGCCTTGGGCACCTaGACTTTTCAGAGCATTCAG +
Preference number: 4 (lower is better)
Translates to: TGHGSHRVRVCLIQLHHFHALGT*TFQSIQ
Trigger: CTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATG...GAAATGGTGCAGTTGGATGAGACACACCCTTACACGGTGACTTCCGTGTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR GCA 90 bp CTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTAATCCAGGAGACAGCTaGAAGTCATGCCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LGHLHFSEHSEEKQYQGGNPGDS*KSCLGH
Trigger: GTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATT...ACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
3UTR CAA 72 bp GATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTaGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: DDTIQETAASHA*GTCTFQSIQRR
Trigger: TCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR TCA 90 bp TTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCCGAAATCACCGATCTTaGCGACCATGCGGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: LGTCTFQSIQRRSNIRVVRNHRS*RPCGVC
Trigger: ACAAACACCGCATGGTCGTCAAGATCGGTGATTTCG...GACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp CTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCCGGTCAGAGATAGGTaGAAAGGTGCCACTCATGAT +
Preference number: 4 (lower is better)
Translates to: LGHLHFSEHSEEKQYQGGPVRDR*KGATHD
Trigger: ATCATGAGTGGCACCTTTGCACCTATCTCTGACCGG...ACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp GCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATCATGCCTTGGGCACCTaGACTTTTCAGAGCATTCAG +
Preference number: 4 (lower is better)
Translates to: ASHALGTCTFQSIQRRSNHALGT*TFQSIQ
Trigger: CTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATG...ATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp TTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCTCAATGACATTGGGGTaGTTGAGCAGCTTGAGGACC +
Preference number: 4 (lower is better)
Translates to: LGTCTFQSIQRRSNIRVVSMTLG*LSSLRT
Trigger: GGTCCTCAAGCTGCTCAACCACCCCAATGTCATTGA...GACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR GCA 90 bp CTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAACTGTCCGTGCTGATTaGTGCCAAAAGTGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: LQVMPWAPALFRAFRGEATVRAD*CQKCSN
Trigger: ATTGCTACACTTTTGGCAGCAATCAGCACGGACAGT...TGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CCA 90 bp GCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATGAATTACAGCGCTTTTaGATGAACTCAGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: ASHALGTCTFQSIQRRSNELQRF*MNSARV
Trigger: CACTCTGGCTGAGTTCATCCAAAAGCGCTGTAATTC...ATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CCA 90 bp CAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATAGACTTATTTTCTAACTaGGCTAGGGGAAAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: QVMPWAPALFRAFRGEAIDLFSN*ARGKGR
Trigger: CCTACCCTTTCCCCTAGCCCAGTTAGAAAATAAGTC...TATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS GCA 90 bp CCACTGGGTGCCCACACCCTGCCGCCCAGGACCGCTCGCTGTCCCTaGACAGGCCTCCGCATGCGGACACTGCCCACGTCGGTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: PLGAHTLPPRTARCP*TGLRMRTLPTSVWR
Trigger: CCTCCACACCGACGTGGGCAGTGTCCGCATGCGGAGGCCTGTGCAGGGACAGCGAGCGGTCCTGGGCGGCAGGGTGTGGGCACCCAGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543014.1
ENST00000592510.1
CDS GCA 90 bp GAGACGCCCAGAGCGCGTGACGCCGGCTTTCTGCGTGCGCCCAGCTaGCACCTGGACCACCTCTGTGTTGAGCATTGGCAGCCGCAGGGG +
Preference number: 5 (lower is better)
Translates to: ETPRARDAGFLRAPS*HLDHLCVEHWQPQG
Trigger: CCCCTGCGGCTGCCAATGCTCAACACAGAGGTGGTCCAGGTGGCAGCTGGGCGCACGCAGAAAGCCGGCGTCACGCGCTCTGGGCGTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000592510.1
CDS GCA 90 bp GAAGGGAGGACTTGCCCCAGGTTTCCCTCTGCCTCAGACCTCCTGTaGTCCCACTGGGTGCCCACACCCTGCCGCCCAGGACCGCTCGCT +
Preference number: 5 (lower is better)
Translates to: EGRTCPRFPSASDLL*SHWVPTPCRPGPLA
Trigger: AGCGAGCGGTCCTGGGCGGCAGGGTGTGGGCACCCAGTGGGAGCACAGGAGGTCTGAGGCAGAGGGAAACCTGGGGCAAGTCCTCCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS CCA 90 bp CACAATCCCGTGCACGTGCGCGCCGACCCCCTGCGCACCTGGCGCTaGCACAACCTGCTCGTCTCCTTCGCTCACTCCATTGTGTCGGGG +
Preference number: 5 (lower is better)
Translates to: HNPVHVRADPLRTWR*HNLLVSFAHSIVSG
Trigger: CCCCGACACAATGGAGTGAGCGAAGGAGACGAGCAGGTTGTGCCAGCGCCAGGTGCGCAGGGGGTCGGCGCGCACGTGCACGGGATTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584342.5
CDS GCA 90 bp GGGGGATACCTCTGCAGCGGACACTGGTGGTCCTGCTCCCTGTGTTaGTGGGGGCCACGGACTTCTCTGCCCTCCGCATGCGGACACTGC +
Preference number: 5 (lower is better)
Translates to: GGYLCSGHWWSCSLC*WGPRTSLPSACGHC
Trigger: GCAGTGTCCGCATGCGGAGGGCAGAGAAGTCCGTGGCCCCCAGCAACACAGGGAGCAGGACCACCAGTGTCCGCTGCAGAGGTATCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS GCA 90 bp CCCGACTGGCCCTCCAGGAAACGCGAGATGAACTGGGGCTGTGGCTaGTCCACTGCCCCAGGAAGGAGACTGCCTCCGCCTGCACCTAGG +
Preference number: 5 (lower is better)
Translates to: PDWPSRKREMNWGCG*STAPGRRLPPPAPR
Trigger: CCTAGGTGCAGGCGGAGGCAGTCTCCTTCCTGGGGCAGTGGAGCAGCCACAGCCCCAGTTCATCTCGCGTTTCCTGGAGGGCCAGTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000592510.1
CDS GCA 90 bp ACTGGTGGTCCTGCTCCCTGTGTTGCTGGGGGCCACGGACTTCTCTaGCCTGCAGGACAGATGGGGGCCTCCTGTGCTCCCACTGGGTGC +
Preference number: 5 (lower is better)
Translates to: TGGPAPCVAGGHGLL*PAGQMGASCAPTGC
Trigger: GCACCCAGTGGGAGCACAGGAGGCCCCCATCTGTCCTGCAGGGCAGAGAAGTCCGTGGCCCCCAGCAACACAGGGAGCAGGACCACCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592510.1
CDS CCA 90 bp CAGGTGCACAATCCCGTGCACGTGCGCGCCGACCCCCTGCGCACCTaGCGCTGGCACAACCTGCTCGTCTCCTTCGCTCACTCCATTGTG +
Preference number: 5 (lower is better)
Translates to: QVHNPVHVRADPLRT*RWHNLLVSFAHSIV
Trigger: CACAATGGAGTGAGCGAAGGAGACGAGCAGGTTGTGCCAGCGCCAGGTGCGCAGGGGGTCGGCGCGCACGTGCACGGGATTGTGCACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584342.5
CDS CCA 90 bp CGGATGCAGAGGGGCTGTGCCATGATGTGGCTGAGTGGTGGCCGCTaGGCAGGCTCCAGGCTGAGTAGACTCAGGACCAGCTGGCGAAGC +
Preference number: 5 (lower is better)
Translates to: RMQRGCAMMWLSGGR*AGSRLSRLRTSWRS
Trigger: GCTTCGCCAGCTGGTCCTGAGTCTACTCAGCCTGGAGCCTGCCCAGCGGCCACCACTCAGCCACATCATGGCACAGCCCCTCTGCATCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000592510.1
CDS CCA 90 bp GTCTGCCGCTGTCTCCACGGCCCCAGGCAAATAGTTCTCGCTCAGTaGACAGGGCCAGCACGTGAGAGGCCCCACAGGCCACCTGCACCA +
Preference number: 5 (lower is better)
Translates to: VCRCLHGPRQIVLAQ*TGPARERPHRPPAP
Trigger: TGGTGCAGGTGGCCTGTGGGGCCTCTCACGTGCTGGCCCTGTCCACTGAGCGAGAACTATTTGCCTGGGGCCGTGGAGACAGCGGCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS CCA 90 bp TCCTCCACTTGCTGGTGGGGGACAGGCTCCTCCCCCAGGGAGAGGTaGTCCAGGCCCAGCTTGTTGAACCTGTTGCTCCCACAGGCTAGG +
Preference number: 5 (lower is better)
Translates to: SSTCWWGTGSSPRER*SRPSLLNLLLPQAR
Trigger: CCTAGCCTGTGGGAGCAACAGGTTCAACAAGCTGGGCCTGGACCACCTCTCCCTGGGGGAGGAGCCTGTCCCCCACCAGCAAGTGGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS CCA 90 bp GTGAAGAAGTCCCCACAGGCCACGTGCTTGATGGTCACACCCGACTaGCCCTCCAGGAAACGCGAGATGAACTGGGGCTGTGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: VKKSPQATCLMVTPD*PSRKREMNWGCGCS
Trigger: GGAGCAGCCACAGCCCCAGTTCATCTCGCGTTTCCTGGAGGGCCAGTCGGGTGTGACCATCAAGCACGTGGCCTGTGGGGACTTCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000592510.1
CDS GCA 90 bp CCTCTGTCAGTCAGGCAGGCAGTGAAGAAGTCCCCACAGGCCACGTaGTTGATGGTCACACCCGACTGGCCCTCCAGGAAACGCGAGATG +
Preference number: 5 (lower is better)
Translates to: PLSVRQAVKKSPQAT*LMVTPDWPSRKREM
Trigger: CATCTCGCGTTTCCTGGAGGGCCAGTCGGGTGTGACCATCAAGCACGTGGCCTGTGGGGACTTCTTCACTGCCTGCCTGACTGACAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS CCA 90 bp GCATCCCCACAGGCTACCATTGCCATCTTGATGCCCTCAAGGCCTTaGACCTTACAGGGTGCCCGACTGCCTCGGCGAGTATTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: ASPQATIAILMPSRP*TLQGARLPRRVLVP
Trigger: GGGCACCAATACTCGCCGAGGCAGTCGGGCACCCTGTAAGGTCCAAGGCCTTGAGGGCATCAAGATGGCAATGGTAGCCTGTGGGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CAA 90 bp GAGCCACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCAGGGTGGTTGAGCAGCTaGAGGACCTGGCACTCATTC +
Preference number: 5 (lower is better)
Translates to: EPLRPAAFSLFMARLWRPGWLSS*RTWHSF
Trigger: GAATGAGTGCCAGGTCCTCAAGCTGCTCAACCACCC...TGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS CCA 90 bp GGACACGGAAGTCACCGTGTAAGGGTGTGTCTCATCCAACTGCACTaGCCGAGGGAGTCCGGCATCCTCATCCCTCCTTCCCAATCGACC +
Preference number: 5 (lower is better)
Translates to: GHGSHRVRVCLIQLH*PRESGILIPPSQST
Trigger: GGTCGATTGGGAAGGAGGGATGAGGATGCCGGACTCCCTCGGCCAGTGCAGTTGGATGAGACACACCCTTACACGGTGACTTCCGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CAA 90 bp TGGCCTTCCTGTCCTCTGGGAAACCGGTCTGGTCCCACCAGCTACCCATTCTCTTGGACCACCTCTGTGTaGAGCATTGGCAGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: WPSCPLGNRSGPTSYPFSWTTSV*SIGSRR
Trigger: CCTGCGGCTGCCAATGCTCAACACAGAGGTGGTCCA...AGAGAATGGGTAGCTGGTGGGACCAGACCGGTTTCCCAGAGGACAGGAAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CAA 90 bp CTCTGGAGGCCACCCTGCTTCCAAAGGCTAGGTCTGCCTTCTAACTCTAGCCAGCCACAGGCCACGTGCTaGATGGTCACACCCGACTGG +
Preference number: 5 (lower is better)
Translates to: LWRPPCFQRLGLPSNSSQPQATC*MVTPDW
Trigger: CCAGTCGGGTGTGACCATCAAGCACGTGGCCTGTGG...CTGGCTAGAGTTAGAAGGCAGACCTAGCCTTTGGAAGCAGGGTGGCCTCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CAA 90 bp ACCGGCTCATCTGTGACCGATCGAACAGCCAGGAGGGTGTTTCCATGGCAACAGTGGCCTAGGCACCCATaGCTGCCGCTGCCGAATGTC +
Preference number: 5 (lower is better)
Translates to: TGSSVTDRTARRVFPWQQWPRHP*LPLPNV
Trigger: GACATTCGGCAGCGGCAGCAATGGGTGCCTAGGCCA...CTGTTGCCATGGAAACACCCTCCTGGCTGTTCGATCGGTCACAGATGAGCCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR CAA 90 bp GAGACAGCGGTCTCGCTATGGTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAAAGCTTGTTGAACCTGTaGCTCCCACAGGCTAGGGCT +
Preference number: 5 (lower is better)
Translates to: ETAVSLWSPGWSPNSWPQSLLNL*LPQARA
Trigger: AGCCCTAGCCTGTGGGAGCAACAGGTTCAACAAGCT...TTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGACCATAGCGAGACCGCTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CAA 90 bp ATGGTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAAGGGATCAAGGGATCCTCTGGTCCAGGCCCAGCTaGTTGAACCTGTTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: MVPRLVSQLLATRDQGILWSRPS*LNLLLP
Trigger: TGGGAGCAACAGGTTCAACAAGCTGGGCCTGGACCA...GAGGATCCCTTGATCCCTTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CAA 90 bp GCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCGCTACCATTGCCATCTaGATGCCCTCAAGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: ARLPSAFLWQGSGGHPASATIAI*MPSRPW
Trigger: CCAAGGCCTTGAGGGCATCAAGATGGCAATGGTAGC...GGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS GCA 90 bp AAGTGTAGCAATCACCCGAGGCAGTCACAGCAGCTGAGTGAGCAGTaGCCAGGTCTATACTCAGCAGAGGCTCCTGGTCCAGGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: KCSNHPRQSQQLSEQ*PGLYSAEAPGPGVQ
Trigger: CTGCACCCCTGGACCAGGAGCCTCTGCTGAGTATAGACCTGGGCACTGCTCACTCAGCTGCTGTGACTGCCTCGGGTGATTGCTACACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS GCA 90 bp CCCGACTGCCTCGGCGAGTATTGGTGCCCAACTGTCCGTGCTGATTaGTGCCAAAAGTGTAGCAATCACCCGAGGCAGTCACAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: PDCLGEYWCPTVRAD*CQKCSNHPRQSQQL
Trigger: CAGCTGCTGTGACTGCCTCGGGTGATTGCTACACTTTTGGCAGCAATCAGCACGGACAGTTGGGCACCAATACTCGCCGAGGCAGTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS GCA 90 bp TACCATTGCCATCTTGATGCCCTCAAGGCCTTGGACCTTACAGGGTaGCCGACTGCCTCGGCGAGTATTGGTGCCCAACTGTCCGTGCTG +
Preference number: 5 (lower is better)
Translates to: YHCHLDALKALDLTG*PTASASIGAQLSVL
Trigger: CAGCACGGACAGTTGGGCACCAATACTCGCCGAGGCAGTCGGGCACCCTGTAAGGTCCAAGGCCTTGAGGGCATCAAGATGGCAATGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CAA 90 bp TCTGGTCCCACCAGCTACCCATTCTCTCAACTGTTTCTGGGGAAAGGCATGGGGGATGCCCTCAAGGCCTaGGACCTTACAGGGTGCCCG +
Preference number: 5 (lower is better)
Translates to: SGPTSYPFSQLFLGKGMGDALKA*DLTGCP
Trigger: CGGGCACCCTGTAAGGTCCAAGGCCTTGAGGGCATC...CCCCATGCCTTTCCCCAGAAACAGTTGAGAGAATGGGTAGCTGGTGGGACCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CAA 90 bp TCTGGTCCCACCAGCTACCCATTCTCTCAACTGTTTCTGGGGAAAGGCATGGGGCGACCTCGCGCCCCTTaGCCCCAAGAGTACACTTCG +
Preference number: 5 (lower is better)
Translates to: SGPTSYPFSQLFLGKGMGRPRAP*PQEYTS
Trigger: CGAAGTGTACTCTTGGGGCAAAGGGGCGCGAGGTCG...CCCCATGCCTTTCCCCAGAAACAGTTGAGAGAATGGGTAGCTGGTGGGACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS GCA 90 bp GGCCTTGGACCTTACAGGGTGCCCGACTGCCTCGGCGAGTATTGGTaGCCAACTGTCCGTGCTGATTGCTGCCAAAAGTGTAGCAATCAC +
Preference number: 5 (lower is better)
Translates to: GLGPYRVPDCLGEYW*PTVRADCCQKCSNH
Trigger: GTGATTGCTACACTTTTGGCAGCAATCAGCACGGACAGTTGGGCACCAATACTCGCCGAGGCAGTCGGGCACCCTGTAAGGTCCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS GCA 90 bp CTCTGCCCCAATAGCTACAGTGAAGGCATCCCCACAGGCTACCATTaGCATCTTGATGCCCTCAAGGCCTTGGACCTTACAGGGTGCCCG +
Preference number: 5 (lower is better)
Translates to: LCPNSYSEGIPTGYH*HLDALKALDLTGCP
Trigger: CGGGCACCCTGTAAGGTCCAAGGCCTTGAGGGCATCAAGATGGCAATGGTAGCCTGTGGGGATGCCTTCACTGTAGCTATTGGGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS GCA 90 bp GACAGATGGGGGCCTAAGGACAAAGACCCTCCTGACATTCCTACATaGAGGAAGGGAGGACTTGCCCCAGGTTTCCCTCTGCCTCAGACC +
Preference number: 5 (lower is better)
Translates to: DRWGPKDKDPPDIPT*RKGGLAPGFPLPQT
Trigger: GGTCTGAGGCAGAGGGAAACCTGGGGCAAGTCCTCCCTTCCTGCATGTAGGAATGTCAGGAGGGTCTTTGTCCTTAGGCCCCCATCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR CAA 90 bp GTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAAGGGATCAAGGGATCCTCCTGGCGATCATAAGGGCTTaGTCTTCCAGGAAGTTCTCG +
Preference number: 5 (lower is better)
Translates to: VPRLVSQLLATRDQGILLAIIRA*SSRKFS
Trigger: CGAGAACTTCCTGGAAGACAAAGCCCTTATGATCGC...CAGGAGGATCCCTTGATCCCTTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CAA 90 bp ACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCCCACAGGCCACGTGCTaGATGGTCACACCCGACTGG +
Preference number: 5 (lower is better)
Translates to: TIQETAASHALGTCTFQSPQATC*MVTPDW
Trigger: CCAGTCGGGTGTGACCATCAAGCACGTGGCCTGTGG...GCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CAA 90 bp ATAGCCCAGCAAAGCCTCCACAATGGTGGGCTGGCTGATGTCAGTGAGGCTGCCGCTGCAAGTCATGCCTaGGGCACCTGCACTTTTCAG +
Preference number: 5 (lower is better)
Translates to: IAQQSLHNGGLADVSEAAAASHA*GTCTFQ
Trigger: CTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGC...GGCAGCCTCACTGACATCAGCCAGCCCACCATTGTGGAGGCTTTGCTGGGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR CAA 90 bp ACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCGCAGGAAGGGAGGACTaGCCCCAGGTTTCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: TIQETAASHALGTCTFQSAGRED*PQVSLC
Trigger: GCAGAGGGAAACCTGGGGCAAGTCCTCCCTTCCTGC...GCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS GCA 90 bp TGGGCTGCCTGCCGCTCTTCCTTGGTCATCTGTTCCACTGGAATCTaGTTGATGATCACCAGCTTCTGGTCAGCCTTTCGCAGGCACAGG +
Preference number: 5 (lower is better)
Translates to: WAACRSSLVICSTGI*LMITSFWSAFRRHR
Trigger: CCTGTGCCTGCGAAAGGCTGACCAGAAGCTGGTGATCATCAAGCAGATTCCAGTGGAACAGATGACCAAGGAAGAGCGGCAGGCAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000581000.1
ENST00000584342.5
ENST00000593261.1
CDS GCA 90 bp GGGTGGTTGAGCAGCTTGAGGACCTGGCACTCATTCTGGGCTGCCTaGCGCTCTTCCTTGGTCATCTGTTCCACTGGAATCTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: GWLSSLRTWHSFWAA*RSSLVICSTGICLM
Trigger: CATCAAGCAGATTCCAGTGGAACAGATGACCAAGGAAGAGCGGCAGGCAGCCCAGAATGAGTGCCAGGTCCTCAAGCTGCTCAACCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000581000.1
ENST00000584342.5
ENST00000593261.1
CDS GCA 90 bp CTTGAGGTCTCGGTGCAGGATGAGGTGGGTGTGCACATGATGCAGTaGAAGCAGGATCTGCACGAAGAAGTGCAGGATGGTCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LEVSVQDEVGVHMMQ*KQDLHEEVQDGLLL
Trigger: GAGGAGGAGACCATCCTGCACTTCTTCGTGCAGATCCTGCTTGCACTGCATCATGTGCACACCCACCTCATCCTGCACCGAGACCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000584342.5
ENST00000593261.1
CDS GCA 90 bp CAGGACCAGCTGGCGAAGCTCAGGGCTGTACCGGTCAGAGATAGGTaGAAAGGTGCCACTCATGATCTTCAGCACCAGTGCTGGCAAGTT +
Preference number: 5 (lower is better)
Translates to: QDQLAKLRAVPVRDR*KGATHDLQHQCWQV
Trigger: AACTTGCCAGCACTGGTGCTGAAGATCATGAGTGGCACCTTTGCACCTATCTCTGACCGGTACAGCCCTGAGCTTCGCCAGCTGGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000592510.1
CDS GCA 90 bp GACTGCCTCGGCGAGTATTGGTGCCCAACTGTCCGTGCTGATTGCTaGCAAAAGTGTAGCAATCACCCGAGGCAGTCACAGCAGCTGAGT +
Preference number: 5 (lower is better)
Translates to: DCLGEYWCPTVRADC*QKCSNHPRQSQQLS
Trigger: ACTCAGCTGCTGTGACTGCCTCGGGTGATTGCTACACTTTTGGCAGCAATCAGCACGGACAGTTGGGCACCAATACTCGCCGAGGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS CCA 90 bp CAAGGCCTTGGACCTTACAGGGTGCCCGACTGCCTCGGCGAGTATTaGTGCCCAACTGTCCGTGCTGATTGCTGCCAAAAGTGTAGCAAT +
Preference number: 5 (lower is better)
Translates to: QGLGPYRVPDCLGEY*CPTVRADCCQKCSN
Trigger: ATTGCTACACTTTTGGCAGCAATCAGCACGGACAGTTGGGCACCAATACTCGCCGAGGCAGTCGGGCACCCTGTAAGGTCCAAGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CAA 90 bp GGGGACCGGCTCATCTGTGACCGATCGAACAGCCAGGAGGGTGTTTCCATGGCATCCACTGGAATCTGCTaGATGATCACCAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GDRLICDRSNSQEGVSMASTGIC*MITSFW
Trigger: CCAGAAGCTGGTGATCATCAAGCAGATTCCAGTGGA...TGCCATGGAAACACCCTCCTGGCTGTTCGATCGGTCACAGATGAGCCGGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR CAA 90 bp GAGACAGCGGTCTCGCTATGGTCCCCAGGCTGGTCTCCCAACTCCTGGCCACAAGGAATTACAGCGCTTTaGGATGAACTCAGCCAGAGT +
Preference number: 5 (lower is better)
Translates to: ETAVSLWSPGWSPNSWPQGITAL*DELSQS
Trigger: ACTCTGGCTGAGTTCATCCAAAAGCGCTGTAATTCC...TTGTGGCCAGGAGTTGGGAGACCAGCCTGGGGACCATAGCGAGACCGCTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CAA 90 bp CCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTGCTTCCAACCGAAATCACCGATCTaGACGACCATGCGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: PAAFSLFMARLWRPPCFQPKSPI*TTMRCL
Trigger: CAAACACCGCATGGTCGTCAAGATCGGTGATTTCGG...TTGGAAGCAGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CAA 90 bp CTGATACCCCATGATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCTGGACCACCTCTGTGTaGAGCATTGGCAGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: LIPHDDTIQETAASHALGWTTSV*SIGSRR
Trigger: CCTGCGGCTGCCAATGCTCAACACAGAGGTGGTCCA...GCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATCATGGGGTATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CAA 90 bp GATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCTGCCTCGGCGAGTATaGGTGCCCAACTGTCCGTGC +
Preference number: 5 (lower is better)
Translates to: DDTIQETAASHALGTCTFLPRRV*VPNCPC
Trigger: GCACGGACAGTTGGGCACCAATACTCGCCGAGGCAG...AAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS GCA 90 bp ATTGGGGTGGTTGAGCAGCTTGAGGACCTGGCACTCATTCTGGGCTaGCTGCCGCTCTTCCTTGGTCATCTGTTCCACTGGAATCTGCTT +
Preference number: 5 (lower is better)
Translates to: IGVVEQLEDLALILG*LPLFLGHLFHWNLL
Trigger: AAGCAGATTCCAGTGGAACAGATGACCAAGGAAGAGCGGCAGGCAGCCCAGAATGAGTGCCAGGTCCTCAAGCTGCTCAACCACCCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000581000.1
ENST00000584342.5
ENST00000593261.1
CDS CCA 90 bp AAGTGCAGGATGGTCTCCTCCTCCAGCAGGGAATTACAGCGCTTTTaGATGAACTCAGCCAGAGTGCCGCCTGGTGCATATTCCATGGCG +
Preference number: 5 (lower is better)
Translates to: KCRMVSSSSRELQRF*MNSARVPPGAYSMA
Trigger: CGCCATGGAATATGCACCAGGCGGCACTCTGGCTGAGTTCATCCAAAAGCGCTGTAATTCCCTGCTGGAGGAGGAGACCATCCTGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000584342.5
ENST00000593261.1
CDS CCA 90 bp TCCAGGCCCAGCTTGTTGAACCTGTTGCTCCCACAGGCTAGGGCTTaGCCAGGCACAGTGAGGATCATGGAGGAATCGATACCACATACA +
Preference number: 5 (lower is better)
Translates to: SRPSLLNLLLPQARA*PGTVRIMEESIPHT
Trigger: TGTATGTGGTATCGATTCCTCCATGATCCTCACTGTGCCTGGCCAAGCCCTAGCCTGTGGGAGCAACAGGTTCAACAAGCTGGGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CAA 90 bp CACTGCGCCCGGCTGCCTTCAGCCTTTTTATGGCAAGGCTCTGGAGGCCACCCTAGGAGAACAAAGTGGTaGAGGTTTCCATATCCAAGG +
Preference number: 5 (lower is better)
Translates to: HCARLPSAFLWQGSGGHPRRTKW*RFPYPR
Trigger: CCTTGGATATGGAAACCTCAACCACTTTGTTCTCCT...AGGGTGGCCTCCAGAGCCTTGCCATAAAAAGGCTGAAGGCAGCCGGGCGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CAA 90 bp CTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCGGGGTTTCACCATGTaGGCCAGGCTGGCCTCAGTC +
Preference number: 5 (lower is better)
Translates to: LGHLHFSEHSEEKQYQGGRGFTM*ARLASV
Trigger: GACTGAGGCCAGCCTGGCCAACATGGTGAAACCCCG...ACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS CCA 90 bp CTCATTCTGGGCTGCCTGCCGCTCTTCCTTGGTCATCTGTTCCACTaGAATCTGCTTGATGATCACCAGCTTCTGGTCAGCCTTTCGCAG +
Preference number: 5 (lower is better)
Translates to: LILGCLPLFLGHLFH*NLLDDHQLLVSLSQ
Trigger: CTGCGAAAGGCTGACCAGAAGCTGGTGATCATCAAGCAGATTCCAGTGGAACAGATGACCAAGGAAGAGCGGCAGGCAGCCCAGAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000581000.1
ENST00000584342.5
ENST00000593261.1
CDS-3UTR CAA 90 bp ACAGGACACGGAAGTCACCGTGTAAGGGTGTGTCTCATCCAACTGCACCATTTCGGGTGGTTGAGCAGCTaGAGGACCTGGCACTCATTC +
Preference number: 5 (lower is better)
Translates to: TGHGSHRVRVCLIQLHHFGWLSS*RTWHSF
Trigger: GAATGAGTGCCAGGTCCTCAAGCTGCTCAACCACCC...GAAATGGTGCAGTTGGATGAGACACACCCTTACACGGTGACTTCCGTGTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR CAA 90 bp ATAGCCCAGCAAAGCCTCCACAATGGTGGGCTGGCTGATGTCAGTGAGGCTGCCGGAATTACAGCGCTTTaGGATGAACTCAGCCAGAGT +
Preference number: 5 (lower is better)
Translates to: IAQQSLHNGGLADVSEAAGITAL*DELSQS
Trigger: ACTCTGGCTGAGTTCATCCAAAAGCGCTGTAATTCC...GGCAGCCTCACTGACATCAGCCAGCCCACCATTGTGGAGGCTTTGCTGGGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR CAA 90 bp CAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATGGCCTAGGCACCCATaGCTGCCGCTGCCGAATGTC +
Preference number: 5 (lower is better)
Translates to: QVMPWAPALFRAFRGEAIWPRHP*LPLPNV
Trigger: GACATTCGGCAGCGGCAGCAATGGGTGCCTAGGCCA...TATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CAA 90 bp ACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCGCTGCAAGTCATGCCTaGGGCACCTGCACTTTTCAG +
Preference number: 5 (lower is better)
Translates to: TIQETAASHALGTCTFQSAASHA*GTCTFQ
Trigger: CTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGC...GCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CAA 90 bp ACAGGACACGGAAGTCACCGTGTAAGGGTGTGTCTCATCCAACTGCACCATTTCAGCAGAGCAGGGGTTTaGCCAGCCCTGATACCCCAT +
Preference number: 5 (lower is better)
Translates to: TGHGSHRVRVCLIQLHHFSRAGV*PALIPH
Trigger: ATGGGGTATCAGGGCTGGCAAAACCCCTGCTCTGCT...GAAATGGTGCAGTTGGATGAGACACACCCTTACACGGTGACTTCCGTGTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR CAA 90 bp GCAAGTCATGCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATTCCAGGCCCAGCTTGTaGAACCTGTTGCTCCCACAG +
Preference number: 5 (lower is better)
Translates to: ASHALGTCTFQSIQRRSNSRPSL*NLLLPQ
Trigger: CTGTGGGAGCAACAGGTTCAACAAGCTGGGCCTGGA...ATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGCATGACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS-3UTR CAA 90 bp TTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCAGCAGAGCAGGGGTTTaGCCAGCCCTGATACCCCAT +
Preference number: 5 (lower is better)
Translates to: LGTCTFQSIQRRSNIRVVSRAGV*PALIPH
Trigger: ATGGGGTATCAGGGCTGGCAAAACCCCTGCTCTGCT...GACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CAA 90 bp ACAGGACACGGAAGTCACCGTGTAAGGGTGTGTCTCATCCAACTGCACCATTTCACGACCATGCGGTGTTaGTCAAGCAGGATGTTCTGG +
Preference number: 5 (lower is better)
Translates to: TGHGSHRVRVCLIQLHHFTTMRC*SSRMFW
Trigger: CCAGAACATCCTGCTTGACAAACACCGCATGGTCGT...GAAATGGTGCAGTTGGATGAGACACACCCTTACACGGTGACTTCCGTGTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS-3UTR CAA 90 bp CTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTACGACCATGCGGTGTTaGTCAAGCAGGATGTTCTGG +
Preference number: 5 (lower is better)
Translates to: LGHLHFSEHSEEKQYQGGTTMRC*SSRMFW
Trigger: CCAGAACATCCTGCTTGACAAACACCGCATGGTCGT...ACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CAA 90 bp TTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCCCGAAATCACCGATCTaGACGACCATGCGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: LGTCTFQSIQRRSNIRVVPKSPI*TTMRCL
Trigger: CAAACACCGCATGGTCGTCAAGATCGGTGATTTCGG...GACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CAA 90 bp GATGACACAATCCAGGAGACAGCTGCAAGTCATGCCTTGGGCACCTGCACTTTTTTGCTGCTAAGGATCTaGGAGATGCCGAAATCACCG +
Preference number: 5 (lower is better)
Translates to: DDTIQETAASHALGTCTFLLLRI*EMPKSP
Trigger: CGGTGATTTCGGCATCTCCAAGATCCTTAGCAGCAA...AAAAGTGCAGGTGCCCAAGGCATGACTTGCAGCTGTCTCCTGGATTGTGTCATC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CAA 90 bp CTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTTCCACTGGAATCTGCTaGATGATCACCAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LGHLHFSEHSEEKQYQGGSTGIC*MITSFW
Trigger: CCAGAAGCTGGTGATCATCAAGCAGATTCCAGTGGA...ACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CAA 90 bp TTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGGTCTTGCTGCTAAGGATCTaGGAGATGCCGAAATCACCG +
Preference number: 5 (lower is better)
Translates to: LGTCTFQSIQRRSNIRVVLLLRI*EMPKSP
Trigger: CGGTGATTTCGGCATCTCCAAGATCCTTAGCAGCAA...GACCACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS-3UTR CAA 90 bp GCCTTGGGCACCTGCACTTTTCAGAGCATTCAGAGGAGAAGCAATATCAGGGTGAGGAGAACAAAGTGGTaGAGGTTTCCATATCCAAGG +
Preference number: 5 (lower is better)
Translates to: ALGTCTFQSIQRRSNIRVRRTKW*RFPYPR
Trigger: CCTTGGATATGGAAACCTCAACCACTTTGTTCTCCT...CACCCTGATATTGCTTCTCCTCTGAATGCTCTGAAAAGTGCAGGTGCCCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS GCA 72 bp GCCCACACCCTGCCGCCCAGGACCGCTCGCTGTCCCTaGACAGGCCTCCGCATGCGGACACTGCCCACGTCG +
Preference number: 6 (lower is better)
Translates to: AHTLPPRTARCP*TGLRMRTLPTS
Trigger: CGACGTGGGCAGTGTCCGCATGCGGAGGCCTGTGCAGGGACAGCGAGCGGTCCTGGGCGGCAGGGTGTGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543014.1
ENST00000592510.1
CDS GCA 72 bp TCAGACCTCCTGTGCTCCCACTGGGTGCCCACACCCTaGCGCCCAGGACCGCTCGCTGTCCCTGCACAGGCC +
Preference number: 6 (lower is better)
Translates to: SDLLCSHWVPTP*RPGPLAVPAQA
Trigger: GGCCTGTGCAGGGACAGCGAGCGGTCCTGGGCGGCAGGGTGTGGGCACCCAGTGGGAGCACAGGAGGTCTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS CCA 72 bp AATCCCGTGCACGTGCGCGCCGACCCCCTGCGCACCTaGCGCTGGCACAACCTGCTCGTCTCCTTCGCTCAC +
Preference number: 6 (lower is better)
Translates to: NPVHVRADPLRT*RWHNLLVSFAH
Trigger: GTGAGCGAAGGAGACGAGCAGGTTGTGCCAGCGCCAGGTGCGCAGGGGGTCGGCGCGCACGTGCACGGGATT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579060.5
ENST00000584342.5
CDS GCA 72 bp GCGCCGACCCCCTGCGCACCTGGCGCTGGCACAACCTaGTCGTCTCCTTCGCTCACTCCATTGTGTCGGGGA +
Preference number: 6 (lower is better)
Translates to: APTPCAPGAGTT*SSPSLTPLCRG
Trigger: TCCCCGACACAATGGAGTGAGCGAAGGAGACGAGCAGGTTGTGCCAGCGCCAGGTGCGCAGGGGGTCGGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584342.5
CDS CCA 72 bp GTGCACGTGCGCGCCGACCCCCTGCGCACCTGGCGCTaGCACAACCTGCTCGTCTCCTTCGCTCACTCCATT +
Preference number: 6 (lower is better)
Translates to: VHVRADPLRTWR*HNLLVSFAHSI
Trigger: AATGGAGTGAGCGAAGGAGACGAGCAGGTTGTGCCAGCGCCAGGTGCGCAGGGGGTCGGCGCGCACGTGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579060.5
ENST00000584342.5
CDS GCA 72 bp CCCGGGGGATACCTCTGCAGCGGACACTGGTGGTCCTaGTCCCTGTGTTGCTGGGGGCCACGGACTTCTCTG +
Preference number: 6 (lower is better)
Translates to: PGGYLCSGHWWS*SLCCWGPRTSL
Trigger: CAGAGAAGTCCGTGGCCCCCAGCAACACAGGGAGCAGGACCACCAGTGTCCGCTGCAGAGGTATCCCCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000592510.1
CDS CCA 72 bp GTGACGCCGGCTTTCTGCGTGCGCCCAGCTGCCACCTaGACCACCTCTGTGTTGAGCATTGGCAGCCGCAGG +
Preference number: 6 (lower is better)
Translates to: VTPAFCVRPAAT*TTSVLSIGSRR
Trigger: CCTGCGGCTGCCAATGCTCAACACAGAGGTGGTCCAGGTGGCAGCTGGGCGCACGCAGAAAGCCGGCGTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000592510.1
CDS CCA 72 bp TGCTGGTGGGGGACAGGCTCCTCCCCCAGGGAGAGGTaGTCCAGGCCCAGCTTGTTGAACCTGTTGCTCCCA +
Preference number: 6 (lower is better)
Translates to: CWWGTGSSPRER*SRPSLLNLLLP
Trigger: TGGGAGCAACAGGTTCAACAAGCTGGGCCTGGACCACCTCTCCCTGGGGGAGGAGCCTGTCCCCCACCAGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS TCA 72 bp CCAGTGCTGGCAAGTTCGCAGCCTCGAAAGCCCTCTTaGGGCTGGCCAGCTCGTAGAGGACACAGCCCAGGG +
Preference number: 6 (lower is better)
Translates to: PVLASSQPRKPS*GWPARRGHSPG
Trigger: CCCTGGGCTGTGTCCTCTACGAGCTGGCCAGCCTCAAGAGGGCTTTCGAGGCTGCGAACTTGCCAGCACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000592510.1
CDS CCA 72 bp TGTCTCCACGGCCCCAGGCAAATAGTTCTCGCTCAGTaGACAGGGCCAGCACGTGAGAGGCCCCACAGGCCA +
Preference number: 6 (lower is better)
Translates to: CLHGPRQIVLAQ*TGPARERPHRP
Trigger: TGGCCTGTGGGGCCTCTCACGTGCTGGCCCTGTCCACTGAGCGAGAACTATTTGCCTGGGGCCGTGGAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS GCA 72 bp TGCCCTCAAGGCCTTGGACCTTACAGGGTGCCCGACTaGCTCGGCGAGTATTGGTGCCCAACTGTCCGTGCT +
Preference number: 6 (lower is better)
Translates to: CPQGLGPYRVPD*LGEYWCPTVRA
Trigger: AGCACGGACAGTTGGGCACCAATACTCGCCGAGGCAGTCGGGCACCCTGTAAGGTCCAAGGCCTTGAGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS CCA 72 bp TCCCCACAGGCCACGTGCTTGATGGTCACACCCGACTaGCCCTCCAGGAAACGCGAGATGAACTGGGGCTGT +
Preference number: 6 (lower is better)
Translates to: SPQATCLMVTPD*PSRKREMNWGC
Trigger: ACAGCCCCAGTTCATCTCGCGTTTCCTGGAGGGCCAGTCGGGTGTGACCATCAAGCACGTGGCCTGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000592510.1
CDS CAA 72 bp AGGCAGGCAGTGAAGAAGTCCCCACAGGCCACGTGCTaGATGGTCACACCCGACTGGCCCTCCAGGAAACGC +
Preference number: 6 (lower is better)
Translates to: RQAVKKSPQATC*MVTPDWPSRKR
Trigger: GCGTTTCCTGGAGGGCCAGTCGGGTGTGACCATCAAGCACGTGGCCTGTGGGGACTTCTTCACTGCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000592510.1
CDS CAA 90 bp GGCATCCCCACAGGCTACCATTGCCATCTTGATGCCCTCAAGGCCTaGGACCTTACAGGGTGCCCGACTGCCTCGGCGAGTATTGGTGCC +
Preference number: 6 (lower is better)
Translates to: GIPTGYHCHLDALKA*DLTGCPTASASIGA
Trigger: GGCACCAATACTCGCCGAGGCAGTCGGGCACCCTGTAAGGTCCAAGGCCTTGAGGGCATCAAGATGGCAATGGTAGCCTGTGGGGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS TCA 72 bp GGTTTCCCCGTGTTAAACAGGATGGTCTCGATCTCCTaGCCTCATGATCCGCCCGCCTCGGCGTTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: GFPVLNRMVSIS*PHDPPASALAS
Trigger: GGAGGCCAACGCCGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGTTTAACACGGGGAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581000.1
CDS GCA 72 bp GTCAGGCAGGCAGTGAAGAAGTCCCCACAGGCCACGTaGTTGATGGTCACACCCGACTGGCCCTCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: VRQAVKKSPQAT*LMVTPDWPSRK
Trigger: TTTCCTGGAGGGCCAGTCGGGTGTGACCATCAAGCACGTGGCCTGTGGGGACTTCTTCACTGCCTGCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000592510.1
CDS GCA 72 bp CAGGCACAGGTGCACAATCCTGGCGCTGGCACAACCTaGTCGTCTCCTTCGCTCACTCCATTGTGTCGGGGA +
Preference number: 6 (lower is better)
Translates to: QAQVHNPGAGTT*SSPSLTPLCRG
Trigger: TCCCCGACACAATGGAGTGAGCGAAGGAGACGAGCAGGTTGTGCCAGCGCCAGGATTGTGCACCTGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579671.5
CDS CCA 72 bp CTGGGGGCCACGGACTTCTCTGCCCTGCAGGACAGATaGGGGCCTAAGGACAAAGACCCTCCTGACATTCCT +
Preference number: 6 (lower is better)
Translates to: LGATDFSALQDR*GPKDKDPPDIP
Trigger: AGGAATGTCAGGAGGGTCTTTGTCCTTAGGCCCCCATCTGTCCTGCAGGGCAGAGAAGTCCGTGGCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543014.1
CDS CCA 72 bp ATAGCATGGGGTACCCACCACCTGCAGGATAGAAGCTaGGATCACAGCCCTGCAGGGAGGGAAGACCAGGGG +
Preference number: 6 (lower is better)
Translates to: IAWGTHHLQDRS*DHSPAGREDQG
Trigger: CCCCTGGTCTTCCCTCCCTGCAGGGCTGTGATCCCAGCTTCTATCCTGCAGGTGGTGGGTACCCCATGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584342.5
CDS CAA 90 bp CTGTCAGTCAGGCAGGCAGTGAAGAAGTCCCCACAGGCCACGTGCTaGATGGTCACACCCGACTGGCCCTCCAGGAAACGCGAGATGAAC +
Preference number: 6 (lower is better)
Translates to: LSVRQAVKKSPQATC*MVTPDWPSRKREMN
Trigger: GTTCATCTCGCGTTTCCTGGAGGGCCAGTCGGGTGTGACCATCAAGCACGTGGCCTGTGGGGACTTCTTCACTGCCTGCCTGACTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268766.11
ENST00000543014.1
CDS GCA 72 bp CATCTTGATGCCCTCAAGGCCTTGGACCTTACAGGGTaGCCGACTGCCTCGGCGAGTATTGGTGCCCAACTG +
Preference number: 6 (lower is better)
Translates to: HLDALKALDLTG*PTASASIGAQL
Trigger: CAGTTGGGCACCAATACTCGCCGAGGCAGTCGGGCACCCTGTAAGGTCCAAGGCCTTGAGGGCATCAAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS CCA 72 bp GGACCTTACAGGGTGCCCGACTGCCTCGGCGAGTATTaGTGCCCAACTGTCCGTGCTGATTGCTGCCAAAAG +
Preference number: 6 (lower is better)
Translates to: GPYRVPDCLGEY*CPTVRADCCQK
Trigger: CTTTTGGCAGCAATCAGCACGGACAGTTGGGCACCAATACTCGCCGAGGCAGTCGGGCACCCTGTAAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS CCA 72 bp AGTCACCGTGTAAGGGTGTGTCTCATCCAACTGCACTaGCCGAGGGAGTCCGGCATCCTCATCCCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: SHRVRVCLIQLH*PRESGILIPPS
Trigger: GGAAGGAGGGATGAGGATGCCGGACTCCCTCGGCCAGTGCAGTTGGATGAGACACACCCTTACACGGTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS GCA 72 bp CCAGGGCCCAGATGTCACTCTTCTGGTTGTAGGGCTTaGCCTCACACAGCTCAGGGGAGATATAGCATGGGG +
Preference number: 6 (lower is better)
Translates to: PGPRCHSSGCRA*PHTAQGRYSMG
Trigger: CCCCATGCTATATCTCCCCTGAGCTGTGTGAGGGCAAGCCCTACAACCAGAAGAGTGACATCTGGGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000593261.1
CDS GCA 72 bp AATCACCCGAGGCAGTCACAGCAGCTGAGTGAGCAGTaGCCAGGTCTATACTCAGCAGAGGCTCCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: NHPRQSQQLSEQ*PGLYSAEAPGP
Trigger: TGGACCAGGAGCCTCTGCTGAGTATAGACCTGGGCACTGCTCACTCAGCTGCTGTGACTGCCTCGGGTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS GCA 72 bp CCTTACAGGGTGCCCGACTGCCTCGGCGAGTATTGGTaGCCAACTGTCCGTGCTGATTGCTGCCAAAAGTGT +
Preference number: 6 (lower is better)
Translates to: PYRVPDCLGEYW*PTVRADCCQKC
Trigger: ACACTTTTGGCAGCAATCAGCACGGACAGTTGGGCACCAATACTCGCCGAGGCAGTCGGGCACCCTGTAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS GCA 72 bp CAGCTTCTTCTCAAAGCAAGCCAAGGGGCTTCCTCCTaGAGAACCACCCAAACAGGGGCCAAAGGGCCAAGG +
Preference number: 6 (lower is better)
Translates to: QLLLKASQGASS*RTTQTGAKGPR
Trigger: CCTTGGCCCTTTGGCCCCTGTTTGGGTGGTTCTGCAGGAGGAAGCCCCTTGGCTTGCTTTGAGAAGAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584342.5
CDS CAA 90 bp CCAATAGCTACAGTGAAGGCATCCCCACAGGCTACCATTGCCATCTaGATGCCCTCAAGGCCTTGGACCTTACAGGGTGCCCGACTGCCT +
Preference number: 6 (lower is better)
Translates to: PIATVKASPQATIAI*MPSRPWTLQGARLP
Trigger: AGGCAGTCGGGCACCCTGTAAGGTCCAAGGCCTTGAGGGCATCAAGATGGCAATGGTAGCCTGTGGGGATGCCTTCACTGTAGCTATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS TCA 72 bp AGGATCATGGAGGAATCGATACCACATACAACTCGCTaGGCTTCCTGTCCTGGGGGCATGGGCACCTGCTGG +
Preference number: 6 (lower is better)
Translates to: RIMEESIPHTTR*ASCPGGMGTCW
Trigger: CCAGCAGGTGCCCATGCCCCCAGGACAGGAAGCTCAGCGAGTTGTATGTGGTATCGATTCCTCCATGATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS GCA 72 bp CTGGCGAAGCTCAGGGCTGTACCGGTCAGAGATAGGTaGAAAGGTGCCACTCATGATCTTCAGCACCAGTGC +
Preference number: 6 (lower is better)
Translates to: LAKLRAVPVRDR*KGATHDLQHQC
Trigger: GCACTGGTGCTGAAGATCATGAGTGGCACCTTTGCACCTATCTCTGACCGGTACAGCCCTGAGCTTCGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000592510.1
CDS CCA 72 bp TCAATGACATTGGGGTGGTTGAGCAGCTTGAGGACCTaGCACTCATTCTGGGCTGCCTGCCGCTCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: SMTLGWLSSLRT*HSFWAACRSSL
Trigger: CAAGGAAGAGCGGCAGGCAGCCCAGAATGAGTGCCAGGTCCTCAAGCTGCTCAACCACCCCAATGTCATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000581000.1
ENST00000584342.5
ENST00000593261.1
CDS CCA 72 bp GGAGGGAAGACCAGGGGCTCTGTGCATAAGCCCATTTaGGGACAGCTTCTTCTCAAAGCAAGCCAAGGGGCT +
Preference number: 6 (lower is better)
Translates to: GGKTRGSVHKPI*GQLLLKASQGA
Trigger: AGCCCCTTGGCTTGCTTTGAGAAGAAGCTGTCCCCAAATGGGCTTATGCACAGAGCCCCTGGTCTTCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584342.5
CDS TCA 72 bp TTGAGGTCTCGGTGCAGGATGAGGTGGGTGTGCACATaGTGCAGTGCAAGCAGGATCTGCACGAAGAAGTGC +
Preference number: 6 (lower is better)
Translates to: LRSRCRMRWVCT*CSASRICTKKC
Trigger: GCACTTCTTCGTGCAGATCCTGCTTGCACTGCATCATGTGCACACCCACCTCATCCTGCACCGAGACCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000584342.5
ENST00000593261.1
CDS GCA 72 bp TCGGTGCAGGATGAGGTGGGTGTGCACATGATGCAGTaGAAGCAGGATCTGCACGAAGAAGTGCAGGATGGT +
Preference number: 6 (lower is better)
Translates to: SVQDEVGVHMMQ*KQDLHEEVQDG
Trigger: ACCATCCTGCACTTCTTCGTGCAGATCCTGCTTGCACTGCATCATGTGCACACCCACCTCATCCTGCACCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000584342.5
ENST00000593261.1
CDS GCA 72 bp GGCGAGTATTGGTGCCCAACTGTCCGTGCTGATTGCTaGCAAAAGTGTAGCAATCACCCGAGGCAGTCACAG +
Preference number: 6 (lower is better)
Translates to: GEYWCPTVRADC*QKCSNHPRQSQ
Trigger: CTGTGACTGCCTCGGGTGATTGCTACACTTTTGGCAGCAATCAGCACGGACAGTTGGGCACCAATACTCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS GCA 72 bp CTCGGCGAGTATTGGTGCCCAACTGTCCGTGCTGATTaGTGCCAAAAGTGTAGCAATCACCCGAGGCAGTCA +
Preference number: 6 (lower is better)
Translates to: LGEYWCPTVRAD*CQKCSNHPRQS
Trigger: TGACTGCCTCGGGTGATTGCTACACTTTTGGCAGCAATCAGCACGGACAGTTGGGCACCAATACTCGCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS CCA 72 bp GGCTGCCTGCCGCTCTTCCTTGGTCATCTGTTCCACTaGAATCTGCTTGATGATCACCAGCTTCTGGTCAGC +
Preference number: 6 (lower is better)
Translates to: GCLPLFLGHLFH*NLLDDHQLLVS
Trigger: GCTGACCAGAAGCTGGTGATCATCAAGCAGATTCCAGTGGAACAGATGACCAAGGAAGAGCGGCAGGCAGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000581000.1
ENST00000584342.5
ENST00000593261.1
CDS CAA 90 bp AGCTTGAGGACCTGGCACTCATTCTGGGCTGCCTGCCGCTCTTCCTaGGTCATCTGTTCCACTGGAATCTGCTTGATGATCACCAGCTTC +
Preference number: 6 (lower is better)
Translates to: SLRTWHSFWAACRSS*VICSTGICLMITSF
Trigger: GAAGCTGGTGATCATCAAGCAGATTCCAGTGGAACAGATGACCAAGGAAGAGCGGCAGGCAGCCCAGAATGAGTGCCAGGTCCTCAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000581000.1
ENST00000584342.5
ENST00000593261.1
CDS TCA 72 bp TCTCCTCCTCCAGCAGGGAATTACAGCGCTTTTGGATaGACTCAGCCAGAGTGCCGCCTGGTGCATATTCCA +
Preference number: 6 (lower is better)
Translates to: SPPPAGNYSAFG*TQPECRLVHIP
Trigger: TGGAATATGCACCAGGCGGCACTCTGGCTGAGTTCATCCAAAAGCGCTGTAATTCCCTGCTGGAGGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000584342.5
ENST00000593261.1
CDS TCA 72 bp TGTTGCTCCCACAGGCTAGGGCTTGGCCAGGCACAGTaGGGATCATGGAGGAATCGATACCACATACAACTC +
Preference number: 6 (lower is better)
Translates to: CCSHRLGLGQAQ*GSWRNRYHIQL
Trigger: GAGTTGTATGTGGTATCGATTCCTCCATGATCCTCACTGTGCCTGGCCAAGCCCTAGCCTGTGGGAGCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS TCA 72 bp AAAAGTGTAGCAATCACCCGAGGCAGTCACAGCAGCTaGGTGAGCAGTGCCCAGGTCTATACTCAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: KSVAITRGSHSS*VSSAQVYTQQR
Trigger: CCTCTGCTGAGTATAGACCTGGGCACTGCTCACTCAGCTGCTGTGACTGCCTCGGGTGATTGCTACACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS CCA 72 bp ATGGTCTCCTCCTCCAGCAGGGAATTACAGCGCTTTTaGATGAACTCAGCCAGAGTGCCGCCTGGTGCATAT +
Preference number: 6 (lower is better)
Translates to: MVSSSSRELQRF*MNSARVPPGAY
Trigger: ATATGCACCAGGCGGCACTCTGGCTGAGTTCATCCAAAAGCGCTGTAATTCCCTGCTGGAGGAGGAGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000584342.5
ENST00000593261.1
CDS CCA 72 bp GCAGTGCAAGCAGGATCTGCACGAAGAAGTGCAGGATaGTCTCCTCCTCCAGCAGGGAATTACAGCGCTTTT +
Preference number: 6 (lower is better)
Translates to: AVQAGSARRSAG*SPPPAGNYSAF
Trigger: AAAAGCGCTGTAATTCCCTGCTGGAGGAGGAGACCATCCTGCACTTCTTCGTGCAGATCCTGCTTGCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000584342.5
ENST00000593261.1
CDS CAA 72 bp ACCTGGCACTCATTCTGGGCTGCCTGCCGCTCTTCCTaGGTCATCTGTTCCACTGGAATCTGCTTGATGATC +
Preference number: 6 (lower is better)
Translates to: TWHSFWAACRSS*VICSTGICLMI
Trigger: GATCATCAAGCAGATTCCAGTGGAACAGATGACCAAGGAAGAGCGGCAGGCAGCCCAGAATGAGTGCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000581000.1
ENST00000584342.5
ENST00000593261.1
CDS GCA 72 bp TGCCGCTCTTCCTTGGTCATCTGTTCCACTGGAATCTaGTTGATGATCACCAGCTTCTGGTCAGCCTTTCGC +
Preference number: 6 (lower is better)
Translates to: CRSSLVICSTGI*LMITSFWSAFR
Trigger: GCGAAAGGCTGACCAGAAGCTGGTGATCATCAAGCAGATTCCAGTGGAACAGATGACCAAGGAAGAGCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000581000.1
ENST00000584342.5
ENST00000593261.1
CDS GCA 72 bp AATAGCTACAGTGAAGGCATCCCCACAGGCTACCATTaGCATCTTGATGCCCTCAAGGCCTTGGACCTTACA +
Preference number: 6 (lower is better)
Translates to: NSYSEGIPTGYH*HLDALKALDLT
Trigger: TGTAAGGTCCAAGGCCTTGAGGGCATCAAGATGGCAATGGTAGCCTGTGGGGATGCCTTCACTGTAGCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268766.11
CDS GCA 72 bp TCAGATAATTGGGACCAGAACTCTAACCCTTGGCCATaGCCATTCCAAGGAGGGAAGCCAGGAGATCTGTGT +
Preference number: 6 (lower is better)
Translates to: SDNWDQNSNPWP*PFQGGKPGDLC
Trigger: ACACAGATCTCCTGGCTTCCCTCCTTGGAATGGGCATGGCCAAGGGTTAGAGTTCTGGTCCCAATTATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581000.1
CDS CAA 90 bp TTGCTCTTGCTGCTAAGGATCTTGGAGATGCCGAAATCACCGATCTaGACGACCATGCGGTGTTTGTCAAGCAGGATGTTCTGGGTCTTG +
Preference number: 6 (lower is better)
Translates to: LLLLLRILEMPKSPI*TTMRCLSSRMFWVL
Trigger: CAAGACCCAGAACATCCTGCTTGACAAACACCGCATGGTCGTCAAGATCGGTGATTTCGGCATCTCCAAGATCCTTAGCAGCAAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000584342.5
CDS CAA 72 bp CTGCTAAGGATCTTGGAGATGCCGAAATCACCGATCTaGACGACCATGCGGTGTTTGTCAAGCAGGATGTTC +
Preference number: 6 (lower is better)
Translates to: LLRILEMPKSPI*TTMRCLSSRMF
Trigger: GAACATCCTGCTTGACAAACACCGCATGGTCGTCAAGATCGGTGATTTCGGCATCTCCAAGATCCTTAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268766.11
ENST00000543014.1
ENST00000579060.5
ENST00000579671.5
ENST00000584342.5