Pregenerated sensors for NEK7 (Homo sapiens)
Ensembl gene IDs: ENSG00000151414Ensembl transcript IDs: ENST00000367383.5, ENST00000367385.9, ENST00000391974.3, ENST00000417895.1, ENST00000442588.5, ENST00000493790.1, ENST00000538004.5, ENST00000544035.5
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTGACTTCCTCTTGGCCTTCAGGCTTCACAATTCTGTGAGAAACTaGTCGCCACTAATACGAAAGCATTCAGGGAAAACACATCTGCAC | + |
|
Preference number: 1 (lower is better) Translates to: SDFLLAFRLHNSVRN*SPLIRKHSGKTHLH Trigger: GTGCAGATGTGTTTTCCCTGAATGCTTTCGTATTAGTGGCGACCAGTTTCTCACAGAATTGTGAAGCCTGAAGGCCAAGAGGAAGTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| 3UTR CCA 90 bp | ACATCGGCTAAAGGGAAGTGTTCTTTGAACATGAGGTTTTCACGTTaGCAGGATAATTCATCCAAGGTTGTAAGATGGCACAGAGTCCTT | + |
|
Preference number: 1 (lower is better) Translates to: TSAKGKCSLNMRFSR*QDNSSKVVRWHRVL Trigger: AAGGACTCTGTGCCATCTTACAACCTTGGATGAATTATCCTGCCAACGTGAAAACCTCATGTTCAAAGAACACTTCCCTTTAGCCGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| 3UTR TCA 90 bp | TTGCAAGGAGGTGATTTAGGTGACTGGTACAAAATGAAGCTTATATaGAAACTGGTTAAGGATTCAAAGCACACTAGCTCTGAAATATTA | + |
|
Preference number: 1 (lower is better) Translates to: LQGGDLGDWYKMKLI*KLVKDSKHTSSEIL Trigger: TAATATTTCAGAGCTAGTGTGCTTTGAATCCTTAACCAGTTTTCATATAAGCTTCATTTTGTACCAGTCACCTAAATCACCTCCTTGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGGGAAAACACATCTGCACAACAGCATTTACGAAATTCTGCCCATTTCCTTGGTATGAGTCTATTCTaGTGTGTGCCAAGCTGCACC | + |
|
Preference number: 2 (lower is better) Translates to: FRENTSAQQHLRNSAHFLGMSLF*CVPSCT Trigger: GGTGCAGCTTGGCACACATCAGAATAGACTCATACC...AAGGAAATGGGCAGAATTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCAGGGAAAACACATCTGCACAACAGCATTTACGAAATTCTGCCCATTTCCTTTATTCCAAAGTCATTTaGGGGTTGCAAGGAGGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: FRENTSAQQHLRNSAHFLYSKVI*GLQGGD Trigger: ATCACCTCCTTGCAACCCCCAAATGACTTTGGAATA...AAGGAAATGGGCAGAATTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGGGAAAACACATCTGCACAACAGCATTTACGAAATTCTGCCCATTTCCTTACTTTTTCTCAGGTATaGGTCTATTCTGATGTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: FRENTSAQQHLRNSAHFLTFSQV*VYSDVC Trigger: GCACACATCAGAATAGACTCATACCTGAGAAAAAGT...AAGGAAATGGGCAGAATTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| 3UTR CAA 90 bp | TTCTCTCCTAACATGCAATTCAGTTATTCCAAAGTCATTTGGGGGTaGCAAGGAGGTGATTTAGGTGACTGGTACAAAATGAAGCTTATA | + |
|
Preference number: 2 (lower is better) Translates to: FSPNMQFSYSKVIWG*QGGDLGDWYKMKLI Trigger: TATAAGCTTCATTTTGTACCAGTCACCTAAATCACCTCCTTGCAACCCCCAAATGACTTTGGAATAACTGAATTGCATGTTAGGAGAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| 3UTR CAA 90 bp | AGGTATGAGTCTATTCTGATGTGTGCCAAGCTGCACCTTCAATATTaGGCACTGACAGTCTATCTAAACACAATTTATCAGCAGAAAACT | + |
|
Preference number: 2 (lower is better) Translates to: RYESILMCAKLHLQY*ALTVYLNTIYQQKT Trigger: AGTTTTCTGCTGATAAATTGTGTTTAGATAGACTGTCAGTGCCAAATATTGAAGGTGCAGCTTGGCACACATCAGAATAGACTCATACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| 3UTR-3UTR CCA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTGGTGATTTAGGTGACTaGTACAAAATGAAGCTTATA | + |
|
Preference number: 2 (lower is better) Translates to: NKSHVQILFLRYESILMCGDLGD*YKMKLI Trigger: TATAAGCTTCATTTTGTACCAGTCACCTAAATCACC...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| 3UTR CCA 72 bp | AAAGGGAAGTGTTCTTTGAACATGAGGTTTTCACGTTaGCAGGATAATTCATCCAAGGTTGTAAGATGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: KGKCSLNMRFSR*QDNSSKVVRWH Trigger: GTGCCATCTTACAACCTTGGATGAATTATCCTGCCAACGTGAAAACCTCATGTTCAAAGAACACTTCCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| 3UTR TCA 72 bp | ATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTaGTGTGTGCCAAGCTGCACCTTCAATATTTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: MFRYFFSGMSLF*CVPSCTFNIWH Trigger: GTGCCAAATATTGAAGGTGCAGCTTGGCACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| 3UTR TCA 72 bp | AAACAAGTCACATGTTCAGATACTTTTTCTCAGGTATaGGTCTATTCTGATGTGTGCCAAGCTGCACCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KQVTCSDTFSQV*VYSDVCQAAPS Trigger: TGAAGGTGCAGCTTGGCACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| 3UTR-3UTR CAA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTATGGGGAGGTATGACTaGCACAAAATACTTTCAATT | + |
|
Preference number: 3 (lower is better) Translates to: NKSHVQILFLRYESILMCMGRYD*HKILSI Trigger: AATTGAAAGTATTTTGTGCAAGTCATACCTCCCCAT...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR GCA 90 bp | TTCAGGGAAAACACATCTGCACAACAGCATTTACGAAATTCTGCCCATTTCCTTGAGGCGCGTCCGGAGTaGGAGCCTAGCGGCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FRENTSAQQHLRNSAHFLEARPE*EPSGGP Trigger: TGGGCCGCCGCTAGGCTCGCACTCCGGACGCGCCTC...AAGGAAATGGGCAGAATTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR GCA 90 bp | TTCAGGGAAAACACATCTGCACAACAGCATTTACGAAATTCTGCCCATTTCCTTTCCCGATCCTCCTCCTaGTGCCGCCGCTGTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FRENTSAQQHLRNSAHFLSRSSS*CRRCQE Trigger: CTCCTGACAGCGGCGGCAGCAGGAGGAGGATCGGGA...AAGGAAATGGGCAGAATTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR GCA 90 bp | AATCTTAACACCAGACATAAATGGGGAGGTATGACTTGCACAAAATACTTTCAAACCCACCCTGCGCACTaGGAGGCGCGTCCGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NLNTRHKWGGMTCTKYFQTHPAH*EARPEC Trigger: GCACTCCGGACGCGCCTCGCAGTGCGCAGGGTGGGT...TTGAAAGTATTTTGTGCAAGTCATACCTCCCCATTTATGTCTGGTGTTAAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR GCA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTCGATCCTCCTCCTGCTaGCGCCGCTGTCAGGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NKSHVQILFLRYESILMCRSSSC*RRCQEC Trigger: ACACTCCTGACAGCGGCGGCAGCAGGAGGAGGATCG...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR TCA 90 bp | CTAACATGCAATTCAGTTATTCCAAAGTCATTTGGGGGTTGCAAGGAGGTGATTTGCAGCTGTGGTTTTTaGGCTGAAAAACCGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTCNSVIPKSFGGCKEVICSCGF*AEKPAK Trigger: CTTGGCCGGTTTTTCAGCTCAAAAACCACAGCTGCA...AATCACCTCCTTGCAACCCCCAAATGACTTTGGAATAACTGAATTGCATGTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR GCA 90 bp | TTCAGGGAAAACACATCTGCACAACAGCATTTACGAAATTCTGCCCATTTCCTTCTTGCAGTGCATGCATaGATCCTCTTTGCTACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FRENTSAQQHLRNSAHFLLAVHA*ILFATS Trigger: TGACGTAGCAAAGAGGATGCATGCATGCACTGCAAG...AAGGAAATGGGCAGAATTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR GCA 90 bp | TTCAGGGAAAACACATCTGCACAACAGCATTTACGAAATTCTGCCCATTTCCTTGCATGTTTAGCTGCTTaGAGTGCATGCATGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: FRENTSAQQHLRNSAHFLACLAA*SACMHP Trigger: AGGATGCATGCATGCACTGCAAGCAGCTAAACATGC...AAGGAAATGGGCAGAATTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR TCA 90 bp | TTCAGGGAAAACACATCTGCACAACAGCATTTACGAAATTCTGCCCATTTCCTTTGCTCATCCATTGTCTaGAGCAACAGGAACTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FRENTSAQQHLRNSAHFLCSSIV*SNRNFR Trigger: TCTAAAGTTCCTGTTGCTTCAGACAATGGATGAGCA...AAGGAAATGGGCAGAATTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR TCA 90 bp | AATCTTAACACCAGACATAAATGGGGAGGTATGACTTGCACAAAATACTTTCAACTGTGGTTTTTGAGCTaGAAAACCGGCCAAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NLNTRHKWGGMTCTKYFQLWFLS*KTGQAQ Trigger: TTGGGCTTGGCCGGTTTTTCAGCTCAAAAACCACAG...TTGAAAGTATTTTGTGCAAGTCATACCTCCCCATTTATGTCTGGTGTTAAGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR TCA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTCGTCATAAACATAGGTaGCGTCTGGTCGCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NKSHVQILFLRYESILMCRHKHR*RLVASL Trigger: CAGAGAAGCGACCAGACGTCACCTATGTTTATGACG...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR GCA 90 bp | AATCTTAACACCAGACATAAATGGGGAGGTATGACTTGCACAAAATACTTTCAAGGAACAGGTGGCCCTTaGATTCCTTGTGATTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NLNTRHKWGGMTCTKYFQGTGGP*IPCDCS Trigger: TGAGCAATCACAAGGAATGCAAGGGCCACCTGTTCC...TTGAAAGTATTTTGTGCAAGTCATACCTCCCCATTTATGTCTGGTGTTAAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR CCA 90 bp | CTAACATGCAATTCAGTTATTCCAAAGTCATTTGGGGGTTGCAAGGAGGTGATTTCGCTTCTCTGGATCTaGGTTGATGCACATATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTCNSVIPKSFGGCKEVISLLWI*VDAHIN Trigger: GTTAATATGTGCATCAACCCAGATCCAGAGAAGCGA...AATCACCTCCTTGCAACCCCCAAATGACTTTGGAATAACTGAATTGCATGTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTGTCTGGTCGCTTCTCTaGATCTGGGTTGATGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: NKSHVQILFLRYESILMCVWSLL*IWVDAH Trigger: ATGTGCATCAACCCAGATCCAGAGAAGCGACCAGAC...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR CCA 90 bp | AATCTTAACACCAGACATAAATGGGGAGGTATGACTTGCACAAAATACTTTCAAAACATAGGTGACGTCTaGTCGCTTCTCTGGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLNTRHKWGGMTCTKYFQNIGDV*SLLWIW Trigger: CCAGATCCAGAGAAGCGACCAGACGTCACCTATGTT...TTGAAAGTATTTTGTGCAAGTCATACCTCCCCATTTATGTCTGGTGTTAAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGGGAAAACACATCTGCACAACAGCATTTACGAAATTCTGCCCATTTCCTTAACACCAGACATAAATaGGGAGGTATGACTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: FRENTSAQQHLRNSAHFLNTRHK*GGMTCT Trigger: TGTGCAAGTCATACCTCCCCATTTATGTCTGGTGTT...AAGGAAATGGGCAGAATTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGGGAAAACACATCTGCACAACAGCATTTACGAAATTCTGCCCATTTCCTTCTCCATATTTTCACCTaGGTAACTGGTACCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: FRENTSAQQHLRNSAHFLLHIFT*VTGTNV Trigger: GACATTGGTACCAGTTACCCAGGTGAAAATATGGAG...AAGGAAATGGGCAGAATTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR GCA 90 bp | CTAACATGCAATTCAGTTATTCCAAAGTCATTTGGGGGTTGCAAGGAGGTGATTACAAGACCAAACATATaGATACAGAGTGGCCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LTCNSVIPKSFGGCKEVITRPNI*IQSGPN Trigger: ATTTGGGCCACTCTGTATGCATATGTTTGGTCTTGT...AATCACCTCCTTGCAACCCCCAAATGACTTTGGAATAACTGAATTGCATGTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR GCA 90 bp | TTCAGGGAAAACACATCTGCACAACAGCATTTACGAAATTCTGCCCATTTCCTTCAGGGAAAACACATCTaGACAACAGCATTTACGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FRENTSAQQHLRNSAHFLQGKHI*TTAFTK Trigger: TTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTG...AAGGAAATGGGCAGAATTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGGGAAAACACATCTGCACAACAGCATTTACGAAATTCTGCCCATTTCCTTATGAGGTTTTCACGTTaGCAGGATAATTCATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FRENTSAQQHLRNSAHFLMRFSR*QDNSSK Trigger: CTTGGATGAATTATCCTGCCAACGTGAAAACCTCAT...AAGGAAATGGGCAGAATTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR TCA 90 bp | TTCAGGGAAAACACATCTGCACAACAGCATTTACGAAATTCTGCCCATTTCCTTAATGCACTGCAAAGCTaGACAAAATACTTCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: FRENTSAQQHLRNSAHFLNALQS*TKYFQT Trigger: TGTTTGGAAGTATTTTGTTCAGCTTTGCAGTGCATT...AAGGAAATGGGCAGAATTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR TCA 90 bp | TTCAGGGAAAACACATCTGCACAACAGCATTTACGAAATTCTGCCCATTTCCTTGTTAACAGCAACACCTaGAGTATATGGATACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FRENTSAQQHLRNSAHFLVNSNT*SIWIQE Trigger: TTCTTGTATCCATATACTTCAGGTGTTGCTGTTAAC...AAGGAAATGGGCAGAATTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR GCA 90 bp | TTCAGGGAAAACACATCTGCACAACAGCATTTACGAAATTCTGCCCATTTCCTTATCCAAGAGACAGGCTaGTCTATAAACTTCACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FRENTSAQQHLRNSAHFLIQETG*SINFTK Trigger: TTTAGTGAAGTTTATAGAGCAGCCTGTCTCTTGGAT...AAGGAAATGGGCAGAATTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR GCA 90 bp | AATCTTAACACCAGACATAAATGGGGAGGTATGACTTGCACAAAATACTTTCAATTTAGCTGCTTGCAGTaGATGCATGCATCCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLNTRHKWGGMTCTKYFQFSCLQ*MHASSL Trigger: CAAAGAGGATGCATGCATGCACTGCAAGCAGCTAAA...TTGAAAGTATTTTGTGCAAGTCATACCTCCCCATTTATGTCTGGTGTTAAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR CCA 90 bp | CTAACATGCAATTCAGTTATTCCAAAGTCATTTGGGGGTTGCAAGGAGGTGATTTTCATGTATTCTCTCTaGAGACATGTAATAAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LTCNSVIPKSFGGCKEVIFMYSL*RHVIRR Trigger: ACGCCTTATTACATGTCTCCAGAGAGAATACATGAA...AATCACCTCCTTGCAACCCCCAAATGACTTTGGAATAACTGAATTGCATGTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTACAGTGACTTCCTCTTaGCCTTCAGGCTTCACAATT | + |
|
Preference number: 4 (lower is better) Translates to: NKSHVQILFLRYESILMCTVTSS*PSGFTI Trigger: AATTGTGAAGCCTGAAGGCCAAGAGGAAGTCACTGT...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| 3UTR CAA 72 bp | TCTATTCTGATGTGTGCCAAGCTGCACCTTCAATATTaGGCACTGACAGTCTATCTAAACACAATTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SILMCAKLHLQY*ALTVYLNTIYQ Trigger: CTGATAAATTGTGTTTAGATAGACTGTCAGTGCCAAATATTGAAGGTGCAGCTTGGCACACATCAGAATAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR TCA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTAAACTCTTCAGTGTCTaGCTCACATTTTGTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NKSHVQILFLRYESILMCKLFSV*LTFCPQ Trigger: TTGGGGACAAAATGTGAGTCAGACACTGAAGAGTTT...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR GCA 90 bp | AATCTTAACACCAGACATAAATGGGGAGGTATGACTTGCACAAAATACTTTCAAATGACTCTTCGAGAATaGATGTGTTCCAATGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: NLNTRHKWGGMTCTKYFQMTLRE*MCSNAL Trigger: CAGTGCATTGGAACACATGCATTCTCGAAGAGTCAT...TTGAAAGTATTTTGTGCAAGTCATACCTCCCCATTTATGTCTGGTGTTAAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR GCA 90 bp | AATCTTAACACCAGACATAAATGGGGAGGTATGACTTGCACAAAATACTTTCAAGTCTATTCTGATGTGTaGCAAGCTGCACCTTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: NLNTRHKWGGMTCTKYFQVYSDV*QAAPSI Trigger: TATTGAAGGTGCAGCTTGGCACACATCAGAATAGAC...TTGAAAGTATTTTGTGCAAGTCATACCTCCCCATTTATGTCTGGTGTTAAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR TCA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTGAAGATCTATTTCTTTaGTGCAATCAGCACGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NKSHVQILFLRYESILMCEDLFL*CNQHVL Trigger: AAGCACGTGCTGATTGCATCAAAGAAATAGATCTTC...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR TCA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTACTTTTTCTCAGGTATaGGTCTATTCTGATGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NKSHVQILFLRYESILMCTFSQV*VYSDVC Trigger: GCACACATCAGAATAGACTCATACCTGAGAAAAAGT...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR GCA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTATGCATGTGTTCCAATaGACTGCAAAGCTGAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: NKSHVQILFLRYESILMCMHVFQ*TAKLNK Trigger: TTTGTTCAGCTTTGCAGTGCATTGGAACACATGCAT...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR GCA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTTGCATGCATCCTCTTTaGTACGTCATAAACATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NKSHVQILFLRYESILMCCMHPL*YVINIG Trigger: ACCTATGTTTATGACGTAGCAAAGAGGATGCATGCA...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTAATTCTGTGAGAAACTaGTCGCCACTAATACGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NKSHVQILFLRYESILMCNSVRN*SPLIRK Trigger: CTTTCGTATTAGTGGCGACCAGTTTCTCACAGAATT...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR TCA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTTTATATCTCTATGCATaGCTCTTCGAGAATGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: NKSHVQILFLRYESILMCLYLYA*LFENAC Trigger: ACATGCATTCTCGAAGAGTCATGCATAGAGATATAA...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR TCA 90 bp | AATCTTAACACCAGACATAAATGGGGAGGTATGACTTGCACAAAATACTTTCAAATAAATGGGGAGGTATaGCTTGCACAAAATACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NLNTRHKWGGMTCTKYFQINGEV*LAQNTF Trigger: GAAAGTATTTTGTGCAAGTCATACCTCCCCATTTAT...TTGAAAGTATTTTGTGCAAGTCATACCTCCCCATTTATGTCTGGTGTTAAGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR GCA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTGGTTTTATATCTCTATaGATGACTCTTCGAGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: NKSHVQILFLRYESILMCGFISL*MTLREC Trigger: GCATTCTCGAAGAGTCATGCATAGAGATATAAAACC...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR GCA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTTGGGGAGGTATGACTTaGACAAAATACTTTCAATTA | + |
|
Preference number: 4 (lower is better) Translates to: NKSHVQILFLRYESILMCWGGMT*TKYFQL Trigger: TAATTGAAAGTATTTTGTGCAAGTCATACCTCCCCA...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTAATCAGCACGTGCTTTaGCATCCATTAAATCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: NKSHVQILFLRYESILMCNQHVL*HPLNQI Trigger: TATTTGATTTAATGGATGCCAAAGCACGTGCTGATT...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS GCA 90 bp | CAGGCGCGGGGCACCCACCCTGCGCACTGCGAGGCGCGTCCGGAGTaGGAGCCTAGCGGCGGCCCATCCTCCCGCGACTCCCGATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QARGTHPAHCEARPE*EPSGGPSSRDSRSS Trigger: GGAGGATCGGGAGTCGCGGGAGGATGGGCCGCCGCTAGGCTCGCACTCCGGACGCGCCTCGCAGTGCGCAGGGTGGGTGCCCCGCGCCTG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367385.9 ENST00000442588.5 |
||
| CDS CCA 90 bp | CTCAGGAAGTTGGGAGTTTTCCGTTCTCCCGCCCGCGAGAGACCTTaGGCGGGCGGGTGGCTCGGCGCGGCGCCGCCGTCGGAAAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LRKLGVFRSPARERP*AGGWLGAAPPSESA Trigger: CGCGCTTTCCGACGGCGGCGCCGCGCCGAGCCACCCGCCCGCCCAAGGTCTCTCGCGGGCGGGAGAACGGAAAACTCCCAACTTCCTGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367383.5 ENST00000367385.9 |
||
| CDS CCA 90 bp | TCCAGGAAGTTGGGAGTTTTCCGTTCTCCCGCCCGCGAGAGACCTTaGGCGGGCGGGTGGCTCGGCGCGGCGCCGCCGTCGGAAAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: SRKLGVFRSPARERP*AGGWLGAAPPSESA Trigger: CGCGCTTTCCGACGGCGGCGCCGCGCCGAGCCACCCGCCCGCCCAAGGTCTCTCGCGGGCGGGAGAACGGAAAACTCCCAACTTCCTGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442588.5 |
||
| CDS GCA 90 bp | AACAGGAACTTTAGAACTCCTGCGCACTGCGAGGCGCGTCCGGAGTaGGAGCCTAGCGGCGGCCCATCCTCCCGCGACTCCCGATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NRNFRTPAHCEARPE*EPSGGPSSRDSRSS Trigger: GGAGGATCGGGAGTCGCGGGAGGATGGGCCGCCGCTAGGCTCGCACTCCGGACGCGCCTCGCAGTGCGCAGGAGTTCTAAAGTTCCTGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538004.5 |
||
| CDS TCA 90 bp | GGAACAGGTGGCCCTTGCATTCCTTGTGATTGCTCATCCATTGTCTaGAGCAACAGGAACTTTAGAACTCCTGCGCACTGCGAGGCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GTGGPCIPCDCSSIV*SNRNFRTPAHCEAR Trigger: ACGCGCCTCGCAGTGCGCAGGAGTTCTAAAGTTCCTGTTGCTTCAGACAATGGATGAGCAATCACAAGGAATGCAAGGGCCACCTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538004.5 |
||
| CDS TCA 90 bp | GGAACAGGTGGCCCTTGCATTCCTTGTGATTGCTCATCCATTGTCTaGAGCAACAGGAACTTTAGAACTCAGGAAGTTGGGAGTTTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GTGGPCIPCDCSSIV*SNRNFRTQEVGSFP Trigger: CGGAAAACTCCCAACTTCCTGAGTTCTAAAGTTCCTGTTGCTTCAGACAATGGATGAGCAATCACAAGGAATGCAAGGGCCACCTGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367383.5 ENST00000367385.9 |
||
| CDS TCA 90 bp | GGAACAGGTGGCCCTTGCATTCCTTGTGATTGCTCATCCATTGTCTaGAGCAACAGGAACTTTAGAACTCTTCTTTGTGGTCTCGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: GTGGPCIPCDCSSIV*SNRNFRTLLCGLGD Trigger: ATCGCCGAGACCACAAAGAAGAGTTCTAAAGTTCCTGTTGCTTCAGACAATGGATGAGCAATCACAAGGAATGCAAGGGCCACCTGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544035.5 |
||
| CDS GCA 90 bp | GATCTTGCATGTTTAGCTGCTTGCAGTGCATGCATGCATCCTCTTTaGTACGTCATAAACATAGGTGACGTCTGGTCGCTTCTCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: DLACLAACSACMHPL*YVINIGDVWSLLWI Trigger: GATCCAGAGAAGCGACCAGACGTCACCTATGTTTATGACGTAGCAAAGAGGATGCATGCATGCACTGCAAGCAGCTAAACATGCAAGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367385.9 ENST00000493790.1 |
||
| CDS GCA 90 bp | GGTTACACTCTTCATGATCTTGCATGTTTAGCTGCTTGCAGTGCATaGATGCATCCTCTTTGCTACGTCATAAACATAGGTGACGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GYTLHDLACLAACSA*MHPLCYVINIGDVW Trigger: CCAGACGTCACCTATGTTTATGACGTAGCAAAGAGGATGCATGCATGCACTGCAAGCAGCTAAACATGCAAGATCATGAAGAGTGTAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367385.9 ENST00000493790.1 |
||
| CDS TCA 90 bp | GGAACAGGTGGCCCTTGCATTCCTTGTGATTGCTCATCCATTGTCTaGAGCAACAGGAACTTTAGAACTCAATTTGAAGAGAGATTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GTGGPCIPCDCSSIV*SNRNFRTQFEERFQ Trigger: TTGAAATCTCTCTTCAAATTGAGTTCTAAAGTTCCTGTTGCTTCAGACAATGGATGAGCAATCACAAGGAATGCAAGGGCCACCTGTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000391974.3 ENST00000417895.1 ENST00000442588.5 |
||
| CDS-3UTR CAA 90 bp | TTCAGGGAAAACACATCTGCACAACAGCATTTACGAAATTCTGCCCATTTCCTTGTGATTGCTCATCCATaGTCTGAAGCAACAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: FRENTSAQQHLRNSAHFLVIAHP*SEATGT Trigger: AGTTCCTGTTGCTTCAGACAATGGATGAGCAATCAC...AAGGAAATGGGCAGAATTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS GCA 90 bp | AATTACTTTGGTTACACTCTTCATGATCTTGCATGTTTAGCTGCTTaGAGTGCATGCATGCATCCTCTTTGCTACGTCATAAACATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NYFGYTLHDLACLAA*SACMHPLCYVINIG Trigger: ACCTATGTTTATGACGTAGCAAAGAGGATGCATGCATGCACTGCAAGCAGCTAAACATGCAAGATCATGAAGAGTGTAACCAAAGTAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367385.9 ENST00000493790.1 |
||
| CDS-3UTR CAA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTTTAGAACTCAGGAAGTaGGGAGTTTTCCGTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NKSHVQILFLRYESILMCLELRK*GVFRSP Trigger: GGGAGAACGGAAAACTCCCAACTTCCTGAGTTCTAA...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR CAA 90 bp | TTCAGGGAAAACACATCTGCACAACAGCATTTACGAAATTCTGCCCATTTCCTTCAATCAGCACGTGCTTaGGCATCCATTAAATCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FRENTSAQQHLRNSAHFLQSARA*ASIKSN Trigger: ATTTGATTTAATGGATGCCAAAGCACGTGCTGATTG...AAGGAAATGGGCAGAATTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR CAA 90 bp | CTAACATGCAATTCAGTTATTCCAAAGTCATTTGGGGGTTGCAAGGAGGTGATTAGAAGATCTATTTCTTaGATGCAATCAGCACGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LTCNSVIPKSFGGCKEVIRRSIS*MQSARA Trigger: AGCACGTGCTGATTGCATCAAAGAAATAGATCTTCT...AATCACCTCCTTGCAACCCCCAAATGACTTTGGAATAACTGAATTGCATGTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR CAA 90 bp | TTCAGGGAAAACACATCTGCACAACAGCATTTACGAAATTCTGCCCATTTCCTTTTCTCTGGATCTGGGTaGATGCACATATTAACTAAC | + |
|
Preference number: 5 (lower is better) Translates to: FRENTSAQQHLRNSAHFLFSGSG*MHILTN Trigger: GTTAGTTAATATGTGCATCAACCCAGATCCAGAGAA...AAGGAAATGGGCAGAATTTCGTAAATGCTGTTGTGCAGATGTGTTTTCCCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS TCA 90 bp | ATGACTTGCACAAAATACTTTCAATTACTTTGGTTACACTCTTCATaGTCTTGCATGTTTAGCTGCTTGCAGTGCATGCATGCATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MTCTKYFQLLWLHSS*SCMFSCLQCMHASS Trigger: AGAGGATGCATGCATGCACTGCAAGCAGCTAAACATGCAAGATCATGAAGAGTGTAACCAAAGTAATTGAAAGTATTTTGTGCAAGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367385.9 ENST00000493790.1 |
||
| CDS-3UTR CAA 90 bp | CTAACATGCAATTCAGTTATTCCAAAGTCATTTGGGGGTTGCAAGGAGGTGATTATGGGGAGGTATGACTaGCACAAAATACTTTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: LTCNSVIPKSFGGCKEVIMGRYD*HKILSI Trigger: AATTGAAAGTATTTTGTGCAAGTCATACCTCCCCAT...AATCACCTCCTTGCAACCCCCAAATGACTTTGGAATAACTGAATTGCATGTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR CAA 90 bp | AATCTTAACACCAGACATAAATGGGGAGGTATGACTTGCACAAAATACTTTCAAAAAGTCATTTGGGGGTaGCAAGGAGGTGATTTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NLNTRHKWGGMTCTKYFQKVIWG*QGGDLG Trigger: ACCTAAATCACCTCCTTGCAACCCCCAAATGACTTT...TTGAAAGTATTTTGTGCAAGTCATACCTCCCCATTTATGTCTGGTGTTAAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS TCA 90 bp | TTGGGTCCTGGATCACACAGGCTTTTAATTACTCGTTTATACAATTaGCTCTTGAACAACACAAGTTTGAACTGTGCAGATCCACTTATA | + |
|
Preference number: 5 (lower is better) Translates to: LGPGSHRLLITRLYN*LLNNTSLNCADPLI Trigger: TATAAGTGGATCTGCACAGTTCAAACTTGTGTTGTTCAAGAGTCAATTGTATAAACGAGTAATTAAAAGCCTGTGTGATCCAGGACCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417895.1 |
||
| CDS-3UTR CAA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTATGCATGCATCCTCTTaGCTACGTCATAAACATAGG | + |
|
Preference number: 5 (lower is better) Translates to: NKSHVQILFLRYESILMCMHASS*LRHKHR Trigger: CCTATGTTTATGACGTAGCAAAGAGGATGCATGCAT...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR CAA 90 bp | AATCTTAACACCAGACATAAATGGGGAGGTATGACTTGCACAAAATACTTTCAAAAAGGGAAGTGTTCTTaGAACATGAGGTTTTCACGT | + |
|
Preference number: 5 (lower is better) Translates to: NLNTRHKWGGMTCTKYFQKGKCS*NMRFSR Trigger: ACGTGAAAACCTCATGTTCAAAGAACACTTCCCTTT...TTGAAAGTATTTTGTGCAAGTCATACCTCCCCATTTATGTCTGGTGTTAAGATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS-3UTR CAA 90 bp | AACAAGTCACATGTTCAGATACTTTTTCTCAGGTATGAGTCTATTCTGATGTGTCACAAAAGTTCACAATaGTGTTCATCTCAATGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NKSHVQILFLRYESILMCHKSSQ*CSSQCP Trigger: TGGACATTGAGATGAACACAATTGTGAACTTTTGTG...ACACATCAGAATAGACTCATACCTGAGAAAAAGTATCTGAACATGTGACTTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367385.9 |
||
| CDS GCA 72 bp | GGCACCCACCCTGCGCACTGCGAGGCGCGTCCGGAGTaGGAGCCTAGCGGCGGCCCATCCTCCCGCGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: GTHPAHCEARPE*EPSGGPSSRDS Trigger: GGAGTCGCGGGAGGATGGGCCGCCGCTAGGCTCGCACTCCGGACGCGCCTCGCAGTGCGCAGGGTGGGTGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367385.9 ENST00000442588.5 |
||
| CDS CCA 72 bp | TTGGGAGTTTTCCGTTCTCCCGCCCGCGAGAGACCTTaGGCGGGCGGGTGGCTCGGCGCGGCGCCGCCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LGVFRSPARERP*AGGWLGAAPPS Trigger: CGACGGCGGCGCCGCGCCGAGCCACCCGCCCGCCCAAGGTCTCTCGCGGGCGGGAGAACGGAAAACTCCCAA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367383.5 ENST00000367385.9 ENST00000442588.5 |
||
| CDS CAA 90 bp | ACTCAGGAAGTTGGGAGTTTTCCGTTCTCCCGCCCGCGAGAGACCTaGGGCGGGCGGGTGGCTCGGCGCGGCGCCGCCGTCGGAAAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: TQEVGSFPFSRPRET*GGRVARRGAAVGKR Trigger: GCGCTTTCCGACGGCGGCGCCGCGCCGAGCCACCCGCCCGCCCAAGGTCTCTCGCGGGCGGGAGAACGGAAAACTCCCAACTTCCTGAGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367383.5 ENST00000367385.9 |
||
| CDS CAA 90 bp | TTCCAGGAAGTTGGGAGTTTTCCGTTCTCCCGCCCGCGAGAGACCTaGGGCGGGCGGGTGGCTCGGCGCGGCGCCGCCGTCGGAAAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: FQEVGSFPFSRPRET*GGRVARRGAAVGKR Trigger: GCGCTTTCCGACGGCGGCGCCGCGCCGAGCCACCCGCCCGCCCAAGGTCTCTCGCGGGCGGGAGAACGGAAAACTCCCAACTTCCTGGAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442588.5 |
||
| CDS GCA 72 bp | TTTAGAACTCCTGCGCACTGCGAGGCGCGTCCGGAGTaGGAGCCTAGCGGCGGCCCATCCTCCCGCGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: FRTPAHCEARPE*EPSGGPSSRDS Trigger: GGAGTCGCGGGAGGATGGGCCGCCGCTAGGCTCGCACTCCGGACGCGCCTCGCAGTGCGCAGGAGTTCTAAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538004.5 |
||
| CDS CAA 90 bp | ACTGAGGAACAGGTGGCCCTTGCATTCCTTGTGATTGCTCATCCATaGTCTGAAGCAACAGGAACTTTAGAACTCCTGCGCACTGCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TEEQVALAFLVIAHP*SEATGTLELLRTAR Trigger: CCTCGCAGTGCGCAGGAGTTCTAAAGTTCCTGTTGCTTCAGACAATGGATGAGCAATCACAAGGAATGCAAGGGCCACCTGTTCCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538004.5 |
||
| CDS CAA 90 bp | ACTGAGGAACAGGTGGCCCTTGCATTCCTTGTGATTGCTCATCCATaGTCTGAAGCAACAGGAACTTTAGAACTCAGGAAGTTGGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: TEEQVALAFLVIAHP*SEATGTLELRKLGV Trigger: AACTCCCAACTTCCTGAGTTCTAAAGTTCCTGTTGCTTCAGACAATGGATGAGCAATCACAAGGAATGCAAGGGCCACCTGTTCCTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367383.5 ENST00000367385.9 |
||
| CDS GCA 72 bp | TGTTTAGCTGCTTGCAGTGCATGCATGCATCCTCTTTaGTACGTCATAAACATAGGTGACGTCTGGTCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CLAACSACMHPL*YVINIGDVWSL Trigger: AAGCGACCAGACGTCACCTATGTTTATGACGTAGCAAAGAGGATGCATGCATGCACTGCAAGCAGCTAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367385.9 ENST00000493790.1 |
||
| CDS CCA 72 bp | CATCCTCTTTGCTACGTCATAAACATAGGTGACGTCTaGTCGCTTCTCTGGATCTGGGTTGATGCACATATT | + |
|
Preference number: 6 (lower is better) Translates to: HPLCYVINIGDV*SLLWIWVDAHI Trigger: AATATGTGCATCAACCCAGATCCAGAGAAGCGACCAGACGTCACCTATGTTTATGACGTAGCAAAGAGGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367385.9 ENST00000493790.1 ENST00000538004.5 |
||
| CDS GCA 72 bp | GGTTACACTCTTCATGATCTTGCATGTTTAGCTGCTTaGAGTGCATGCATGCATCCTCTTTGCTACGTCATA | + |
|
Preference number: 6 (lower is better) Translates to: GYTLHDLACLAA*SACMHPLCYVI Trigger: TATGACGTAGCAAAGAGGATGCATGCATGCACTGCAAGCAGCTAAACATGCAAGATCATGAAGAGTGTAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367385.9 ENST00000493790.1 |
||
| CDS CAA 90 bp | ACTGAGGAACAGGTGGCCCTTGCATTCCTTGTGATTGCTCATCCATaGTCTGAAGCAACAGGAACTTTAGAACTCAATTTGAAGAGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: TEEQVALAFLVIAHP*SEATGTLELNLKRD Trigger: ATCTCTCTTCAAATTGAGTTCTAAAGTTCCTGTTGCTTCAGACAATGGATGAGCAATCACAAGGAATGCAAGGGCCACCTGTTCCTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000391974.3 ENST00000417895.1 ENST00000442588.5 |
||
| CDS GCA 72 bp | CTTCATGATCTTGCATGTTTAGCTGCTTGCAGTGCATaGATGCATCCTCTTTGCTACGTCATAAACATAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LHDLACLAACSA*MHPLCYVINIG Trigger: ACCTATGTTTATGACGTAGCAAAGAGGATGCATGCATGCACTGCAAGCAGCTAAACATGCAAGATCATGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367385.9 ENST00000493790.1 |
||
| CDS CAA 72 bp | TTTGGATGGTTGAGTTGCTTAAGAAGATCTATTTCTTaGATGCAATCAGCACGTGCTTTGGCATCCATTAAA | + |
|
Preference number: 6 (lower is better) Translates to: FGWLSCLRRSIS*MQSARALASIK Trigger: TTTAATGGATGCCAAAGCACGTGCTGATTGCATCAAAGAAATAGATCTTCTTAAGCAACTCAACCATCCAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367385.9 ENST00000538004.5 |
||
| CDS CAA 72 bp | TGGATCACACAGGCTTTTAATTACTCGTTTATACAATaGACTCTTGAACAACACAAGTTTGAACTGTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: WITQAFNYSFIQ*TLEQHKFELCR Trigger: TCTGCACAGTTCAAACTTGTGTTGTTCAAGAGTCAATTGTATAAACGAGTAATTAAAAGCCTGTGTGATCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417895.1 |
||