RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NEK6 (Homo sapiens)

Ensembl gene IDs: ENSG00000119408

Ensembl transcript IDs: ENST00000320246.10, ENST00000373596.5, ENST00000373600.7, ENST00000373603.5, ENST00000394199.6, ENST00000422297.5, ENST00000423785.5, ENST00000425237.5, ENST00000444973.5, ENST00000447379.1, ENST00000454453.5, ENST00000539416.5, ENST00000540326.5, ENST00000545174.5, ENST00000546191.5

Found 1033 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTaGATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCCCGATGC +
Preference number: 1 (lower is better)
Translates to: QPPGPGCFLQERPGQ*MPAGSRCQESPARC
Trigger: GCATCGGGCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR GCA 90 bp CGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATaGCTGCAGGCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGC +
Preference number: 1 (lower is better)
Translates to: RPALGVSSRKGLVSE*LQAAGVRNHLPDAS
Trigger: GCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR GCA 90 bp CGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTaGAGGCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTG +
Preference number: 1 (lower is better)
Translates to: RPWVFPPGKAWSVNA*RQQVSGITCPMPAL
Trigger: CAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR CCA 90 bp GAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCACGTGTaGAAACAGCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGG +
Preference number: 1 (lower is better)
Translates to: ETVGLTVSQQIRVHV*KQQPPGPGCFLQER
Trigger: CCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGCTGTTTCCACACGTGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR CCA 90 bp GAAACAGCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTaGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGC +
Preference number: 1 (lower is better)
Translates to: ETAAARPWVFPPGKA*SVNACRQQVSGITC
Trigger: GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGCTGTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR CCA 90 bp ACAGCAGATCCGAGTCCACGTGTGGAAACAGCAGCCGCCCGGCCCTaGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCAGG +
Preference number: 1 (lower is better)
Translates to: TADPSPRVETAAARP*VFPPGKAWSVNACR
Trigger: CCTGCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGCTGTTTCCACACGTGGACTCGGATCTGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR GCA 90 bp GCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTaGCCGATGCCAGCGCTGCTCTTGTCTGGAGGGCCAGACTGTCAT +
Preference number: 1 (lower is better)
Translates to: AWSVNACRQQVSGIT*PMPALLLSGGPDCH
Trigger: ATGACAGTCTGGCCCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR GCA 90 bp CCTGCAGGCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTaGTCTTGTCTGGAGGGCCAGACTGTCATGAAGTCAGTGACGACA +
Preference number: 1 (lower is better)
Translates to: PAGSRCQESPARCQR*SCLEGQTVMKSVTT
Trigger: TGTCGTCACTGACTTCATGACAGTCTGGCCCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGCCTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR CCA 90 bp TCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCTaGGGAGAACGATGGAATTACCTCATGAGGGCAGAAACTCGGCTG +
Preference number: 1 (lower is better)
Translates to: SALRPAPVLQLPGAG*GERWNYLMRAETRL
Trigger: CAGCCGAGTTTCTGCCCTCATGAGGTAATTCCATCGTTCTCCCCAGCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR CCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTaGGCAGATTGTTCTCACAGTGTGGAAAGCGGGTGGCATGCACAA +
Preference number: 1 (lower is better)
Translates to: RPGEWLRSCASRGSS*ADCSHSVESGWHAQ
Trigger: TTGTGCATGCCACCCGCTTTCCACACTGTGAGAACAATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR TCA 90 bp CTGGCTGCCAAGAAGATGCTCCTGCTTCCCGATGCCTTTTGCCTGTaGCACTCTGGCCAGGTGCAGGGCTCTCATCGTCACTCACCAAGT +
Preference number: 1 (lower is better)
Translates to: LAAKKMLLLPDAFCL*HSGQVQGSHRHSPS
Trigger: ACTTGGTGAGTGACGATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGAGCATCTTCTTGGCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR TCA 90 bp AGCTGTGTTCTCAAGCCCAGCTCAGTTCTGAGAACCAAGAGAAGGTaGGCAGGTGCACCGCCAGAGCTGTGTGAAGGTGGGTGGACCTCA +
Preference number: 1 (lower is better)
Translates to: SCVLKPSSVLRTKRR*AGAPPELCEGGWTS
Trigger: TGAGGTCCACCCACCTTCACACAGCTCTGGCGGTGCACCTGCTCACCTTCTCTTGGTTCTCAGAACTGAGCTGGGCTTGAGAACACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR CCA 90 bp CCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCTGGGGAGAACGATaGAATTACCTCATGAGGGCAGAAACTCGGCTGATGATGAGTTTC +
Preference number: 1 (lower is better)
Translates to: PAPVLQLPGAGWGER*NYLMRAETRLMMSF
Trigger: GAAACTCATCATCAGCCGAGTTTCTGCCCTCATGAGGTAATTCCATCGTTCTCCCCAGCCTGCCCCTGGCAGCTGTAACACAGGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR GCA 90 bp ATGATCATTTCACAAACACTCAGGCCTGGTGAGTGGCTGAGATCGTaGGCCTCCAGAGGGTCCAGTTGGGCAGATTGTTCTCACAGTGTG +
Preference number: 1 (lower is better)
Translates to: MIISQTLRPGEWLRS*ASRGSSWADCSHSV
Trigger: CACACTGTGAGAACAATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCTGAGTGTTTGTGAAATGATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR TCA 90 bp AAAAATGGCAAAGCCAAAGCTGTGTTCTCAAGCCCAGCTCAGTTCTaGGAACCAAGAGAAGGTGAGCAGGTGCACCGCCAGAGCTGTGTG +
Preference number: 1 (lower is better)
Translates to: KNGKAKAVFSSPAQF*EPREGEQVHRQSCV
Trigger: CACACAGCTCTGGCGGTGCACCTGCTCACCTTCTCTTGGTTCTCAGAACTGAGCTGGGCTTGAGAACACAGCTTTGGCTTTGCCATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR GCA 90 bp AGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTaGCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGAGA +
Preference number: 1 (lower is better)
Translates to: RNYPKDSHYNPDTGG*RGSLNHLPLLTQLR
Trigger: TCTCAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR GCA 90 bp TGGACTCCCTTGAGGCTTCAGGTGACCATCGATACCTACCCTTTTTaGTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTGGTTTGGTTT +
Preference number: 1 (lower is better)
Translates to: WTPLRLQVTIDTYPF*WLNLFGVASGLVWF
Trigger: AAACCAAACCAAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCTCAAGGGAGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR TCA 90 bp GTGTACATTAATTCTCGACTTCCGTGGTCCATGGACTTCAGTTTGTaGAGGGTGAGTGGCTACCATTTTTGGATCATCTACTTTTTGTAT +
Preference number: 1 (lower is better)
Translates to: VYINSRLPWSMDFSL*RVSGYHFWIIYFLY
Trigger: ATACAAAAAGTAGATGATCCAAAAATGGTAGCCACTCACCCTTCACAAACTGAAGTCCATGGACCACGGAAGTCGAGAATTAATGTACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR CCA 90 bp GGAGGGCCAGACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTaGAAGGTTAACTTTACGTACAAAAACAAAATTCAAATGATTTCC +
Preference number: 1 (lower is better)
Translates to: GGPDCHEVSDDSSDN*KVNFTYKNKIQMIS
Trigger: GGAAATCATTTGAATTTTGTTTTTGTACGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTCTGGCCCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCGCCCGATGCCAGCGCTaGTCTTGTCTGGAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAARCQR*SCLEGQ
Trigger: CTGGCCCTCCAGACAAGAGCAGCGCTGGCATCGGGC...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCTACAGGGGGCTGCCGTaGCTCGCTGAACCACCTGCC +
Preference number: 2 (lower is better)
Translates to: AARPWVFPPGKAWSVNACYRGLP*LAEPPA
Trigger: GGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTA...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCGTGTCAGGAATCACCTaGCCGATGCCAGCGCTGCTC +
Preference number: 2 (lower is better)
Translates to: AARPWVFPPGKAWSVNACVSGIT*PMPALL
Trigger: GAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACAC...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCACCATCAGTGACATGTaGCCAGCGCCCCTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: AARPWVFPPGKAWSVNACTISDM*PAPLPQ
Trigger: CTGAGGGAGGGGCGCTGGCCACATGTCACTGATGGT...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGTACAGGGGGCTGCCGTaGCTCGCTGAACCACCTGCC +
Preference number: 2 (lower is better)
Translates to: AAGVRNHLPDASAALVWRYRGLP*LAEPPA
Trigger: GGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTA...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCGATGCCTTTTGCCTGTaGCACTCTGGCCAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: AAARPWVFPPGKAWSVNADAFCL*HSGQVQ
Trigger: CTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATC...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCGACACTCTGGCCAGGTaGAGGGCTCTCATCGTCACT +
Preference number: 2 (lower is better)
Translates to: AARPWVFPPGKAWSVNACDTLAR*RALIVT
Trigger: AGTGACGATGAGAGCCCTGCACCTGGCCAGAGTGTC...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCGAATCACCTGCCCGATaGCAGCGCTGCTCTTGTCTG +
Preference number: 2 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAESPAR*QRCSCL
Trigger: CAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTC...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCATCCGAGTCCACGTGTaGAAACAGCAGCCGCCCGGC +
Preference number: 2 (lower is better)
Translates to: QGESALRPAPVLQLPGAGIRVHV*KQQPPG
Trigger: GCCGGGCGGCTGCTGTTTCCACACGTGGACTCGGAT...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR TCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATGAAAGGCCTGGTCAGTaGATGCCTGCAGGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: RPGEWLRSCASRGSSWADERPGQ*MPAGSR
Trigger: CCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTC...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR GCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCCCAGATACAGGGGGCTaGCGTGGCTCGCTGAACCAC +
Preference number: 2 (lower is better)
Translates to: SCFPMPFACDTLARCRALPDTGG*RGSLNH
Trigger: GTGGTTCAGCGAGCCACGGCAGCCCCCTGTATCTGG...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCGCTCCTGCTTCCCGATaGCTTTTGCCTGTGACACTC +
Preference number: 2 (lower is better)
Translates to: AARPWVFPPGKAWSVNACAPASR*LLPVTL
Trigger: GAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGAGC...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGGCTGCCAAGAAGATaGTCCTGCTTCCCGATGCCT +
Preference number: 2 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAWLPRR*SCFPMP
Trigger: AGGCATCGGGAAGCAGGAGCATCTTCTTGGCAGCCA...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCGGCCTGGTCAGTGAATaGCTGCAGGCAGCAGGTGTC +
Preference number: 2 (lower is better)
Translates to: QGESALRPAPVLQLPGAGGLVSE*LQAAGV
Trigger: GACACCTGCTGCCTGCAGGCATTCACTGACCAGGCC...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR CAA 90 bp GCCCAGCCTGGCTGCCAAGAAGATGCTCCTGCTTCCCGATGCCTTTaGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCGTCACTC +
Preference number: 2 (lower is better)
Translates to: AQPGCQEDAPASRCL*PVTLWPGAGLSSSL
Trigger: GAGTGACGATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGAGCATCTTCTTGGCAGCCAGGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGGATGCCTTTTGCCTGTaGCACTCTGGCCAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: AAGVRNHLPDASAALVWRDAFCL*HSGQVQ
Trigger: CTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATC...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCCCAAGAAGATGCTCCTaGTTCCCGATGCCTTTTGCC +
Preference number: 2 (lower is better)
Translates to: AARPWVFPPGKAWSVNACPRRCS*FPMPFA
Trigger: GGCAAAAGGCATCGGGAAGCAGGAGCATCTTCTTGG...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGATGGCCCAGCCTGGCTaGCAAGAAGATGCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: AAGVRNHLPDASAALVWRMAQPG*QEDAPA
Trigger: AGCAGGAGCATCTTCTTGGCAGCCAGGCTGGGCCAT...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCACCATCAGTGACATGTaGCCAGCGCCCCTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: SCFPMPFACDTLARCRALTISDM*PAPLPQ
Trigger: CTGAGGGAGGGGCGCTGGCCACATGTCACTGATGGT...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATTTGCCTGTGACACTCTaGCCAGGTGCAGGGCTCTCA +
Preference number: 2 (lower is better)
Translates to: RPGEWLRSCASRGSSWADLPVTL*PGAGLS
Trigger: TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAA...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATCCTCCAGGAAAGGCCTaGTCAGTGAATGCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: RPGEWLRSCASRGSSWADPPGKA*SVNACR
Trigger: CCTGCAGGCATTCACTGACCAGGCCTTTCCTGGAGG...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR TCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGAAAGGCCTGGTCAGTaGATGCCTGCAGGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: GCIWRDCRADGVTADPSPERPGQ*MPAGSR
Trigger: CCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCCCAGATACAGGGGGCTaGCGTGGCTCGCTGAACCAC +
Preference number: 2 (lower is better)
Translates to: HSVESGWHAQSRLIACWGPDTGG*RGSLNH
Trigger: GTGGTTCAGCGAGCCACGGCAGCCCCCTGTATCTGG...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR GCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGTGTCAGGAATCACCTaGCCGATGCCAGCGCTGCTC +
Preference number: 2 (lower is better)
Translates to: GCIWRDCRADGVTADPSPVSGIT*PMPALL
Trigger: GAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACAC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAACCATCAGTGACATGTaGCCAGCGCCCCTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: GCIWRDCRADGVTADPSPTISDM*PAPLPQ
Trigger: CTGAGGGAGGGGCGCTGGCCACATGTCACTGATGGT...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR CAA 90 bp AGGCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTaGTCTGGAGGGCCAGACTGTCATGAAGTCAGTGACGACAGCTCA +
Preference number: 2 (lower is better)
Translates to: RQQVSGITCPMPALL*SGGPDCHEVSDDSS
Trigger: TGAGCTGTCGTCACTGACTTCATGACAGTCTGGCCCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCGAATCTGACCATCAGTaGCATGTGGCCAGCGCCCCT +
Preference number: 2 (lower is better)
Translates to: CFPMPFACDTLARCRALIESDHQ*HVASAP
Trigger: AGGGGCGCTGGCCACATGTCACTGATGGTCAGATTC...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGAATCTGACCATCAGTaGCATGTGGCCAGCGCCCCT +
Preference number: 2 (lower is better)
Translates to: GCIWRDCRADGVTADPSPESDHQ*HVASAP
Trigger: AGGGGCGCTGGCCACATGTCACTGATGGTCAGATTC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCATGGACTTCAGTTTGTaGAGGGTGAGTGGCTACCAT +
Preference number: 2 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAMDFSL*RVSGYH
Trigger: ATGGTAGCCACTCACCCTTCACAAACTGAAGTCCAT...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGGAAAGGCCTGGTCAGTaGATGCCTGCAGGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: RKGCIWRDCRADGVTADPERPGQ*MPAGSR
Trigger: CCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTC...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATCAGGCGACAGGGACTTaGTTGTTCTGTGGAGAGAAC +
Preference number: 2 (lower is better)
Translates to: RPGEWLRSCASRGSSWADQATGT*LFCGEN
Trigger: GTTCTCTCCACAGAACAATCAAGTCCCTGTCGCCTG...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR GCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCGACACTCTGGCCAGGTaGAGGGCTCTCATCGTCACT +
Preference number: 2 (lower is better)
Translates to: GKAWSVNACRQQVSGITCDTLAR*RALIVT
Trigger: AGTGACGATGAGAGCCCTGCACCTGGCCAGAGTGTC...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGCCAAGAAGATGCTCCTaGTTCCCGATGCCTTTTGCC +
Preference number: 2 (lower is better)
Translates to: AAGVRNHLPDASAALVWRPRRCS*FPMPFA
Trigger: GGCAAAAGGCATCGGGAAGCAGGAGCATCTTCTTGG...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCATTGCCTGTGACACTCTaGCCAGGTGCAGGGCTCTCA +
Preference number: 2 (lower is better)
Translates to: GCIWRDCRADGVTADPSPLPVTL*PGAGLS
Trigger: TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAA...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR CAA 90 bp GATTGTTCTCACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTaGATTGCGTGCTGGGGCTGGCAGTGTTGGGGAGACACGGCAGGG +
Preference number: 2 (lower is better)
Translates to: DCSHSVESGWHAQSR*IACWGWQCWGDTAG
Trigger: CCCTGCCGTGTCTCCCCAACACTGCCAGCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTGAGAACAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR TCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGGAATCTGACCATCAGTaGCATGTGGCCAGCGCCCCT +
Preference number: 2 (lower is better)
Translates to: RKGCIWRDCRADGVTADPESDHQ*HVASAP
Trigger: AGGGGCGCTGGCCACATGTCACTGATGGTCAGATTC...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGGATGCCTTTTGCCTGTaGCACTCTGGCCAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: RKGCIWRDCRADGVTADPDAFCL*HSGQVQ
Trigger: CTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATC...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp GAAGTCAGAGTGGACTCCCTTGAGGCTTCAGGTGACCATCGATACCTACCCTTTGGCCTGGTGAGTGGCTaGGATCGTGCGCCTCCAGAG +
Preference number: 2 (lower is better)
Translates to: EVRVDSLEASGDHRYLPFGLVSG*DRAPPE
Trigger: CTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCC...AAAGGGTAGGTATCGATGGTCACCTGAAGCCTCAAGGGAGTCCACTCTGACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR GCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGGACACTCTGGCCAGGTaGAGGGCTCTCATCGTCACT +
Preference number: 2 (lower is better)
Translates to: RKGCIWRDCRADGVTADPDTLAR*RALIVT
Trigger: AGTGACGATGAGAGCCCTGCACCTGGCCAGAGTGTC...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCTGGCTGCCAAGAAGATaGTCCTGCTTCCCGATGCCT +
Preference number: 2 (lower is better)
Translates to: GKAWSVNACRQQVSGITCWLPRR*SCFPMP
Trigger: AGGCATCGGGAAGCAGGAGCATCTTCTTGGCAGCCA...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCATGGCTGCCAAGAAGATaGTCCTGCTTCCCGATGCCT +
Preference number: 2 (lower is better)
Translates to: GCIWRDCRADGVTADPSPWLPRR*SCFPMP
Trigger: AGGCATCGGGAAGCAGGAGCATCTTCTTGGCAGCCA...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCATGGTCAGTGAATGCCTaGAGGCAGCAGGTGTCAGGA +
Preference number: 2 (lower is better)
Translates to: GCIWRDCRADGVTADPSPWSVNA*RQQVSG
Trigger: TCCTGACACCTGCTGCCTGCAGGCATTCACTGACCA...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCGCCTTGACAGGTCACTaGAGGAATTACCCTAAAGAT +
Preference number: 2 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAALTGH*RNYPKD
Trigger: ATCTTTAGGGTAATTCCTCCAGTGACCTGTCAAGGC...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCAATTCTCGACTTCCGTaGTCCATGGACTTCAGTTTG +
Preference number: 2 (lower is better)
Translates to: AARPWVFPPGKAWSVNACNSRLP*SMDFSL
Trigger: CAAACTGAAGTCCATGGACCACGGAAGTCGAGAATT...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCAATTCTCGACTTCCGTaGTCCATGGACTTCAGTTTG +
Preference number: 2 (lower is better)
Translates to: AAARPWVFPPGKAWSVNANSRLP*SMDFSL
Trigger: CAAACTGAAGTCCATGGACCACGGAAGTCGAGAATT...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGAAGGACTTTGGAATCTaGCCATCAGTGACATGTGGC +
Preference number: 2 (lower is better)
Translates to: AAGVRNHLPDASAALVWRKDFGI*PSVTCG
Trigger: GCCACATGTCACTGATGGTCAGATTCCAAAGTCCTT...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCATGGACTTCAGTTTGTaGAGGGTGAGTGGCTACCAT +
Preference number: 2 (lower is better)
Translates to: QGESALRPAPVLQLPGAGMDFSL*RVSGYH
Trigger: ATGGTAGCCACTCACCCTTCACAAACTGAAGTCCAT...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR TCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGATGGACTTCAGTTTGTaGAGGGTGAGTGGCTACCAT +
Preference number: 2 (lower is better)
Translates to: AAGVRNHLPDASAALVWRMDFSL*RVSGYH
Trigger: ATGGTAGCCACTCACCCTTCACAAACTGAAGTCCAT...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGGCTCCTGCTTCCCGATaGCTTTTGCCTGTGACACTC +
Preference number: 2 (lower is better)
Translates to: RKGCIWRDCRADGVTADPAPASR*LLPVTL
Trigger: GAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGAGC...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGTGGCTGCCAAGAAGATaGTCCTGCTTCCCGATGCCT +
Preference number: 2 (lower is better)
Translates to: RKGCIWRDCRADGVTADPWLPRR*SCFPMP
Trigger: AGGCATCGGGAAGCAGGAGCATCTTCTTGGCAGCCA...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCCTTTTCTATATCCCATaGTTCCTTCCCATGGAGGAA +
Preference number: 2 (lower is better)
Translates to: AARPWVFPPGKAWSVNACLFYIP*FLPMEE
Trigger: TTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAG...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR CAA 90 bp TCAGCTGCTCTGCCTTCAGCATCTGCTGTAAGGCTGGGCAGCCTTTaGGGGAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTAC +
Preference number: 2 (lower is better)
Translates to: SAALPSASAVRLGSL*GNLLNPVVLAVLGY
Trigger: GTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCAGATGCTGAAGGCAGAGCAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAAAGGACTTTGGAATCTaGCCATCAGTGACATGTGGC +
Preference number: 2 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSKDFGI*PSVTCG
Trigger: GCCACATGTCACTGATGGTCAGATTCCAAAGTCCTT...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCACAGCATTCAAGGAGGTaGCGAAGTTCCTGGTACACA +
Preference number: 2 (lower is better)
Translates to: GCIWRDCRADGVTADPSPQHSRR*RSSWYT
Trigger: TGTGTACCAGGAACTTCGTCACCTCCTTGAATGCTG...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp CATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTGGCCTGGTGAGTGGCTaGGATCGTGCGCCTCCAGAG +
Preference number: 2 (lower is better)
Translates to: HRYLPFLLAEFVWGGLRFGLVSG*DRAPPE
Trigger: CTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCC...AAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CCA 90 bp GAAGTCAGAGTGGACTCCCTTGAGGCTTCAGGTGACCATCGATACCTACCCTTTACCATCAGTGACATGTaGCCAGCGCCCCTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: EVRVDSLEASGDHRYLPFTISDM*PAPLPQ
Trigger: CTGAGGGAGGGGCGCTGGCCACATGTCACTGATGGT...AAAGGGTAGGTATCGATGGTCACCTGAAGCCTCAAGGGAGTCCACTCTGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGTACAGGGGGCTGCCGTaGCTCGCTGAACCACCTGCC +
Preference number: 2 (lower is better)
Translates to: RTALRFSISHASFPWRKMYRGLP*LAEPPA
Trigger: GGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTA...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGGCCTTGACAGGTCACTaGAGGAATTACCCTAAAGAT +
Preference number: 2 (lower is better)
Translates to: AAGVRNHLPDASAALVWRALTGH*RNYPKD
Trigger: ATCTTTAGGGTAATTCCTCCAGTGACCTGTCAAGGC...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTTTGTGAAGGGTGAGTaGCTACCATTTTTGGATCAT +
Preference number: 2 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAFVKGE*LPFLDH
Trigger: ATGATCCAAAAATGGTAGCCACTCACCCTTCACAAA...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGCAGCCGCCCGGCCCTaGGTGTTTCCTCCAGGAAAG +
Preference number: 2 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGAAARP*VFPPGK
Trigger: CTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR TCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCAAGGACTTTGGAATCTaGCCATCAGTGACATGTGGC +
Preference number: 2 (lower is better)
Translates to: CFPMPFACDTLARCRALIKDFGI*PSVTCG
Trigger: GCCACATGTCACTGATGGTCAGATTCCAAAGTCCTT...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCCAGCATTCAAGGAGGTaGCGAAGTTCCTGGTACACA +
Preference number: 2 (lower is better)
Translates to: HSVESGWHAQSRLIACWGQHSRR*RSSWYT
Trigger: TGTGTACCAGGAACTTCGTCACCTCCTTGAATGCTG...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR TCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGCAGCATTCAAGGAGGTaGCGAAGTTCCTGGTACACA +
Preference number: 2 (lower is better)
Translates to: RKGCIWRDCRADGVTADPQHSRR*RSSWYT
Trigger: TGTGTACCAGGAACTTCGTCACCTCCTTGAATGCTG...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAATGGACTTCAGTTTGTaGAGGGTGAGTGGCTACCAT +
Preference number: 2 (lower is better)
Translates to: GCIWRDCRADGVTADPSPMDFSL*RVSGYH
Trigger: ATGGTAGCCACTCACCCTTCACAAACTGAAGTCCAT...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCATGGACTTCAGTTTGTaGAGGGTGAGTGGCTACCAT +
Preference number: 2 (lower is better)
Translates to: GKAWSVNACRQQVSGITCMDFSL*RVSGYH
Trigger: ATGGTAGCCACTCACCCTTCACAAACTGAAGTCCAT...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGCCAGATACAGGGGGCTaGCGTGGCTCGCTGAACCAC +
Preference number: 2 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGPDTGG*RGSLNH
Trigger: GTGGTTCAGCGAGCCACGGCAGCCCCCTGTATCTGG...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR GCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGCCAGATACAGGGGGCTaGCGTGGCTCGCTGAACCAC +
Preference number: 2 (lower is better)
Translates to: RTALRFSISHASFPWRKMPDTGG*RGSLNH
Trigger: GTGGTTCAGCGAGCCACGGCAGCCCCCTGTATCTGG...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAATCACACGGTCTCCTaGAAGTCTCCTGTTAGCATA +
Preference number: 2 (lower is better)
Translates to: SCFPMPFACDTLARCRALNHTVS*KSPVSI
Trigger: TATGCTAACAGGAGACTTGCAGGAGACCGTGTGATT...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAAATCACACGGTCTCCTaGAAGTCTCCTGTTAGCATA +
Preference number: 2 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSNHTVS*KSPVSI
Trigger: TATGCTAACAGGAGACTTGCAGGAGACCGTGTGATT...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GAAGTCAGAGTGGACTCCCTTGAGGCTTCAGGTGACCATCGATACCTACCCTTTATGGCCCAGCCTGGCTaGCAAGAAGATGCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: EVRVDSLEASGDHRYLPFMAQPG*QEDAPA
Trigger: AGCAGGAGCATCTTCTTGGCAGCCAGGCTGGGCCAT...AAAGGGTAGGTATCGATGGTCACCTGAAGCCTCAAGGGAGTCCACTCTGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR GCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATCTTTTCTATATCCCATaGTTCCTTCCCATGGAGGAA +
Preference number: 2 (lower is better)
Translates to: RPGEWLRSCASRGSSWADLFYIP*FLPMEE
Trigger: TTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAG...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR GCA 90 bp GAAGTCAGAGTGGACTCCCTTGAGGCTTCAGGTGACCATCGATACCTACCCTTTGAATCACCTGCCCGATaGCAGCGCTGCTCTTGTCTG +
Preference number: 2 (lower is better)
Translates to: EVRVDSLEASGDHRYLPFESPAR*QRCSCL
Trigger: CAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTC...AAAGGGTAGGTATCGATGGTCACCTGAAGCCTCAAGGGAGTCCACTCTGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCGCCTTGACAGGTCACTaGAGGAATTACCCTAAAGAT +
Preference number: 2 (lower is better)
Translates to: SCFPMPFACDTLARCRALALTGH*RNYPKD
Trigger: ATCTTTAGGGTAATTCCTCCAGTGACCTGTCAAGGC...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGCATGCTTCCTTCCCATaGAGGAAAATGCTTAACACT +
Preference number: 2 (lower is better)
Translates to: AAGVRNHLPDASAALVWRHASFP*RKMLNT
Trigger: AGTGTTAAGCATTTTCCTCCATGGGAAGGAAGCATG...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCTTACTGAATGGGGCCTaGGAAGTTGTGTTTTTCAAG +
Preference number: 2 (lower is better)
Translates to: QGESALRPAPVLQLPGAGLLNGA*EVVFFK
Trigger: CTTGAAAAACACAACTTCCCAGGCCCCATTCAGTAA...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CCA 90 bp GAAGTCAGAGTGGACTCCCTTGAGGCTTCAGGTGACCATCGATACCTACCCTTTCTGCCAGGGGCAGGCTaGGGAGAACGATGGAATTAC +
Preference number: 2 (lower is better)
Translates to: EVRVDSLEASGDHRYLPFLPGAG*GERWNY
Trigger: GTAATTCCATCGTTCTCCCCAGCCTGCCCCTGGCAG...AAAGGGTAGGTATCGATGGTCACCTGAAGCCTCAAGGGAGTCCACTCTGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR TCA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGAAAGGCCTGGTCAGTaGATGCCTGCAGGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGERPGQ*MPAGSR
Trigger: CCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTC...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR GCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCAATCACACGGTCTCCTaGAAGTCTCCTGTTAGCATA +
Preference number: 2 (lower is better)
Translates to: GKAWSVNACRQQVSGITCNHTVS*KSPVSI
Trigger: TATGCTAACAGGAGACTTGCAGGAGACCGTGTGATT...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAAATCACACGGTCTCCTaGAAGTCTCCTGTTAGCATA +
Preference number: 2 (lower is better)
Translates to: GCIWRDCRADGVTADPSPNHTVS*KSPVSI
Trigger: TATGCTAACAGGAGACTTGCAGGAGACCGTGTGATT...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGGCCTGGTCAGTGAATaGCTGCAGGCAGCAGGTGTC +
Preference number: 2 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGGLVSE*LQAAGV
Trigger: GACACCTGCTGCCTGCAGGCATTCACTGACCAGGCC...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CCA 90 bp CATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTACCATCAGTGACATGTaGCCAGCGCCCCTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: HRYLPFLLAEFVWGGLRFTISDM*PAPLPQ
Trigger: CTGAGGGAGGGGCGCTGGCCACATGTCACTGATGGT...AAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGTACAGGGGGCTGCCGTaGCTCGCTGAACCACCTGCC +
Preference number: 2 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTYRGLP*LAEPPA
Trigger: GGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTA...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGTTTGTGAAGGGTGAGTaGCTACCATTTTTGGATCAT +
Preference number: 2 (lower is better)
Translates to: AAGVRNHLPDASAALVWRFVKGE*LPFLDH
Trigger: ATGATCCAAAAATGGTAGCCACTCACCCTTCACAAA...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAAATTCTCGACTTCCGTaGTCCATGGACTTCAGTTTG +
Preference number: 2 (lower is better)
Translates to: GCIWRDCRADGVTADPSPNSRLP*SMDFSL
Trigger: CAAACTGAAGTCCATGGACCACGGAAGTCGAGAATT...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGGACAGCTCAGACAATTaGAAGGTTAACTTTACGTAC +
Preference number: 2 (lower is better)
Translates to: AAGVRNHLPDASAALVWRDSSDN*KVNFTY
Trigger: GTACGTAAAGTTAACCTTCCAATTGTCTGAGCTGTC...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGCTGGTTTCCTACACATaGTACAGGTGTACATTAATT +
Preference number: 2 (lower is better)
Translates to: AAGVRNHLPDASAALVWRLVSYT*YRCTLI
Trigger: AATTAATGTACACCTGTATCATGTGTAGGAAACCAG...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGCCAGATACAGGGGGCTaGCGTGGCTCGCTGAACCAC +
Preference number: 2 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTPDTGG*RGSLNH
Trigger: GTGGTTCAGCGAGCCACGGCAGCCCCCTGTATCTGG...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGATGGCCCAGCCTGGCTaGCAAGAAGATGCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: RTALRFSISHASFPWRKMMAQPG*QEDAPA
Trigger: AGCAGGAGCATCTTCTTGGCAGCCAGGCTGGGCCAT...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGGAAGATGGCCCAGCCTaGCTGCCAAGAAGATGCTCC +
Preference number: 2 (lower is better)
Translates to: RTALRFSISHASFPWRKMEDGPA*LPRRCS
Trigger: GGAGCATCTTCTTGGCAGCCAGGCTGGGCCATCTTC...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGAAGATGGCCCAGCCTaGCTGCCAAGAAGATGCTCC +
Preference number: 2 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGEDGPA*LPRRCS
Trigger: GGAGCATCTTCTTGGCAGCCAGGCTGGGCCATCTTC...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCCATGCTTCCTTCCCATaGAGGAAAATGCTTAACACT +
Preference number: 2 (lower is better)
Translates to: GKAWSVNACRQQVSGITCHASFP*RKMLNT
Trigger: AGTGTTAAGCATTTTCCTCCATGGGAAGGAAGCATG...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCACATGCTTCCTTCCCATaGAGGAAAATGCTTAACACT +
Preference number: 2 (lower is better)
Translates to: GCIWRDCRADGVTADPSPHASFP*RKMLNT
Trigger: AGTGTTAAGCATTTTCCTCCATGGGAAGGAAGCATG...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp CATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTCTGCCAGGGGCAGGCTaGGGAGAACGATGGAATTAC +
Preference number: 2 (lower is better)
Translates to: HRYLPFLLAEFVWGGLRFLPGAG*GERWNY
Trigger: GTAATTCCATCGTTCTCCCCAGCCTGCCCCTGGCAG...AAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR CAA 90 bp GTGGACTCCCTTGAGGCTTCAGGTGACCATCGATACCTACCCTTTTaGCTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTGGTTTGGTT +
Preference number: 2 (lower is better)
Translates to: VDSLEASGDHRYLPF*LAEFVWGGLRFGLV
Trigger: AACCAAACCAAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCTCAAGGGAGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR GCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCGTCACGCTAGGAAGTTaGAGAACCAGAATTTGTAAA +
Preference number: 2 (lower is better)
Translates to: GKAWSVNACRQQVSGITCVTLGS*RTRICK
Trigger: TTTACAAATTCTGGTTCTGCAACTTCCTAGCGTGAC...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGCTGTGTGAAGGTGGGTaGACCTCACTTTGGCCGGTT +
Preference number: 2 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGLCEGG*TSLWPV
Trigger: AACCGGCCAAAGTGAGGTCCACCCACCTTCACACAG...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR TCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGGAATCTGACCATCAGTaGCATGTGGCCAGCGCCCCT +
Preference number: 2 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTESDHQ*HVASAP
Trigger: AGGGGCGCTGGCCACATGTCACTGATGGTCAGATTC...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR TCA 90 bp GAAGTCAGAGTGGACTCCCTTGAGGCTTCAGGTGACCATCGATACCTACCCTTTATGGACTTCAGTTTGTaGAGGGTGAGTGGCTACCAT +
Preference number: 2 (lower is better)
Translates to: EVRVDSLEASGDHRYLPFMDFSL*RVSGYH
Trigger: ATGGTAGCCACTCACCCTTCACAAACTGAAGTCCAT...AAAGGGTAGGTATCGATGGTCACCTGAAGCCTCAAGGGAGTCCACTCTGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR TCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCACTGGTTTCCTACACATaGTACAGGTGTACATTAATT +
Preference number: 2 (lower is better)
Translates to: GCIWRDCRADGVTADPSPLVSYT*YRCTLI
Trigger: AATTAATGTACACCTGTATCATGTGTAGGAAACCAG...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GAACGATGGAATTACCTCATGAGGGCAGAAACTCGGCTGATGATGAGTTTCAAAGACACTCTGGCCAGGTaGAGGGCTCTCATCGTCACT +
Preference number: 2 (lower is better)
Translates to: ERWNYLMRAETRLMMSFKDTLAR*RALIVT
Trigger: AGTGACGATGAGAGCCCTGCACCTGGCCAGAGTGTC...TTTGAAACTCATCATCAGCCGAGTTTCTGCCCTCATGAGGTAATTCCATCGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR GCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGGTCACGCTAGGAAGTTaGAGAACCAGAATTTGTAAA +
Preference number: 2 (lower is better)
Translates to: RKGCIWRDCRADGVTADPVTLGS*RTRICK
Trigger: TTTACAAATTCTGGTTCTGCAACTTCCTAGCGTGAC...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCGTCACGCTAGGAAGTTaGAGAACCAGAATTTGTAAA +
Preference number: 2 (lower is better)
Translates to: HSVESGWHAQSRLIACWGVTLGS*RTRICK
Trigger: TTTACAAATTCTGGTTCTGCAACTTCCTAGCGTGAC...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR GCA 90 bp AGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGTGGTAAGCACGCCCGATGCCAGCGCTaGTCTTGTCTGGAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: RMLAKSWSGIRKIFSGKHARCQR*SCLEGQ
Trigger: CTGGCCCTCCAGACAAGAGCAGCGCTGGCATCGGGC...GTGCTTACCACTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CCA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTTACAGGGGGCTGCCGTaGCTCGCTGAACCACCTGCC +
Preference number: 2 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTYRGLP*LAEPPA
Trigger: GGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTA...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CCA 90 bp GAACGATGGAATTACCTCATGAGGGCAGAAACTCGGCTGATGATGAGTTTCAAATTGCCTGTGACACTCTaGCCAGGTGCAGGGCTCTCA +
Preference number: 2 (lower is better)
Translates to: ERWNYLMRAETRLMMSFKLPVTL*PGAGLS
Trigger: TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAA...TTTGAAACTCATCATCAGCCGAGTTTCTGCCCTCATGAGGTAATTCCATCGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGGAAGATGGCCCAGCCTaGCTGCCAAGAAGATGCTCC +
Preference number: 2 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTEDGPA*LPRRCS
Trigger: GGAGCATCTTCTTGGCAGCCAGGCTGGGCCATCTTC...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGTTTGTGAAGGGTGAGTaGCTACCATTTTTGGATCAT +
Preference number: 2 (lower is better)
Translates to: RKGCIWRDCRADGVTADPFVKGE*LPFLDH
Trigger: ATGATCCAAAAATGGTAGCCACTCACCCTTCACAAA...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCGACAGCTCAGACAATTaGAAGGTTAACTTTACGTAC +
Preference number: 2 (lower is better)
Translates to: HSVESGWHAQSRLIACWGDSSDN*KVNFTY
Trigger: GTACGTAAAGTTAACCTTCCAATTGTCTGAGCTGTC...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CCA 90 bp AGCTGGAAGCAGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGATCCGAGTCCACGTGTaGAAACAGCAGCCGCCCGGC +
Preference number: 2 (lower is better)
Translates to: SWKQNVGKKLVWNQKNLQIRVHV*KQQPPG
Trigger: GCCGGGCGGCTGCTGTTTCCACACGTGGACTCGGAT...CTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CCA 90 bp CATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTGGCTGGGGAGAACGATaGAATTACCTCATGAGGGCA +
Preference number: 2 (lower is better)
Translates to: HRYLPFLLAEFVWGGLRFGWGER*NYLMRA
Trigger: TGCCCTCATGAGGTAATTCCATCGTTCTCCCCAGCC...AAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTTACAGGGGGCTGCCGTaGCTCGCTGAACCACCTGCC +
Preference number: 2 (lower is better)
Translates to: EHISGFLHMIQVYINSRLYRGLP*LAEPPA
Trigger: GGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTA...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp GAAGTCAGAGTGGACTCCCTTGAGGCTTCAGGTGACCATCGATACCTACCCTTTAATTCTCGACTTCCGTaGTCCATGGACTTCAGTTTG +
Preference number: 2 (lower is better)
Translates to: EVRVDSLEASGDHRYLPFNSRLP*SMDFSL
Trigger: CAAACTGAAGTCCATGGACCACGGAAGTCGAGAATT...AAAGGGTAGGTATCGATGGTCACCTGAAGCCTCAAGGGAGTCCACTCTGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR TCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGAAGGACTTTGGAATCTaGCCATCAGTGACATGTGGC +
Preference number: 2 (lower is better)
Translates to: GGITLKIHITIQIQGAAVKDFGI*PSVTCG
Trigger: GCCACATGTCACTGATGGTCAGATTCCAAAGTCCTT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGCCAAGAAGATGCTCCTaGTTCCCGATGCCTTTTGCC +
Preference number: 2 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTPRRCS*FPMPFA
Trigger: GGCAAAAGGCATCGGGAAGCAGGAGCATCTTCTTGG...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp AGCTGGAAGCAGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGGAAGATGGCCCAGCCTaGCTGCCAAGAAGATGCTCC +
Preference number: 2 (lower is better)
Translates to: SWKQNVGKKLVWNQKNLQEDGPA*LPRRCS
Trigger: GGAGCATCTTCTTGGCAGCCAGGCTGGGCCATCTTC...CTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCATGTTGGCAAAAAGTTaGTCTGGAATCAGAAAAATC +
Preference number: 2 (lower is better)
Translates to: HSVESGWHAQSRLIACWGMLAKS*SGIRKI
Trigger: GATTTTTCTGATTCCAGACCAACTTTTTGCCAACAT...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR TCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGCAGCATTCAAGGAGGTaGCGAAGTTCCTGGTACACA +
Preference number: 2 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTQHSRR*RSSWYT
Trigger: TGTGTACCAGGAACTTCGTCACCTCCTTGAATGCTG...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp CATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTAATTCTCGACTTCCGTaGTCCATGGACTTCAGTTTG +
Preference number: 2 (lower is better)
Translates to: HRYLPFLLAEFVWGGLRFNSRLP*SMDFSL
Trigger: CAAACTGAAGTCCATGGACCACGGAAGTCGAGAATT...AAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR TCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTGAATCTGACCATCAGTaGCATGTGGCCAGCGCCCCT +
Preference number: 2 (lower is better)
Translates to: EHISGFLHMIQVYINSRLESDHQ*HVASAP
Trigger: AGGGGCGCTGGCCACATGTCACTGATGGTCAGATTC...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAAGACACTCTGGCCAGGTaGAGGGCTCTCATCGTCACT +
Preference number: 2 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFEDTLAR*RALIVT
Trigger: AGTGACGATGAGAGCCCTGCACCTGGCCAGAGTGTC...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR GCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTATGGCCCAGCCTGGCTaGCAAGAAGATGCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: EHISGFLHMIQVYINSRLMAQPG*QEDAPA
Trigger: AGCAGGAGCATCTTCTTGGCAGCCAGGCTGGGCCAT...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTTGGTCAGTGAATGCCTaGAGGCAGCAGGTGTCAGGA +
Preference number: 2 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTWSVNA*RQQVSG
Trigger: TCCTGACACCTGCTGCCTGCAGGCATTCACTGACCA...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTGAAGATGGCCCAGCCTaGCTGCCAAGAAGATGCTCC +
Preference number: 2 (lower is better)
Translates to: EHISGFLHMIQVYINSRLEDGPA*LPRRCS
Trigger: GGAGCATCTTCTTGGCAGCCAGGCTGGGCCATCTTC...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGTTACTGAATGGGGCCTaGGAAGTTGTGTTTTTCAAG +
Preference number: 2 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGLLNGA*EVVFFK
Trigger: CTTGAAAAACACAACTTCCCAGGCCCCATTCAGTAA...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR GCA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTCCAAGAAGATGCTCCTaGTTCCCGATGCCTTTTGCC +
Preference number: 2 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTPRRCS*FPMPFA
Trigger: GGCAAAAGGCATCGGGAAGCAGGAGCATCTTCTTGG...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR TCA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTCAGCATTCAAGGAGGTaGCGAAGTTCCTGGTACACA +
Preference number: 2 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTQHSRR*RSSWYT
Trigger: TGTGTACCAGGAACTTCGTCACCTCCTTGAATGCTG...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR GCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGCTTTTCTATATCCCATaGTTCCTTCCCATGGAGGAA +
Preference number: 2 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTLFYIP*FLPMEE
Trigger: TTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAG...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR GCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGGTCACGCTAGGAAGTTaGAGAACCAGAATTTGTAAA +
Preference number: 2 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTVTLGS*RTRICK
Trigger: TTTACAAATTCTGGTTCTGCAACTTCCTAGCGTGAC...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGTTTGTGAAGGGTGAGTaGCTACCATTTTTGGATCAT +
Preference number: 2 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTFVKGE*LPFLDH
Trigger: ATGATCCAAAAATGGTAGCCACTCACCCTTCACAAA...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp AGCTGGAAGCAGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGCATGCTTCCTTCCCATaGAGGAAAATGCTTAACACT +
Preference number: 2 (lower is better)
Translates to: SWKQNVGKKLVWNQKNLQHASFP*RKMLNT
Trigger: AGTGTTAAGCATTTTCCTCCATGGGAAGGAAGCATG...CTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR GCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAAATCACACGGTCTCCTaGAAGTCTCCTGTTAGCATA +
Preference number: 2 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLNHTVS*KSPVSI
Trigger: TATGCTAACAGGAGACTTGCAGGAGACCGTGTGATT...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTGACAGCTCAGACAATTaGAAGGTTAACTTTACGTAC +
Preference number: 2 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTDSSDN*KVNFTY
Trigger: GTACGTAAAGTTAACCTTCCAATTGTCTGAGCTGTC...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR GCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTGTCACGCTAGGAAGTTaGAGAACCAGAATTTGTAAA +
Preference number: 2 (lower is better)
Translates to: EHISGFLHMIQVYINSRLVTLGS*RTRICK
Trigger: TTTACAAATTCTGGTTCTGCAACTTCCTAGCGTGAC...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTTTTGTGAAGGGTGAGTaGCTACCATTTTTGGATCAT +
Preference number: 2 (lower is better)
Translates to: EHISGFLHMIQVYINSRLFVKGE*LPFLDH
Trigger: ATGATCCAAAAATGGTAGCCACTCACCCTTCACAAA...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR CCA 72 bp GGGCTGACGGTGTCACAGCAGATCCGAGTCCACGTGTaGAAACAGCAGCCGCCCGGCCCTGGGTGTTTCCTC +
Preference number: 3 (lower is better)
Translates to: GLTVSQQIRVHV*KQQPPGPGCFL
Trigger: GAGGAAACACCCAGGGCCGGGCGGCTGCTGTTTCCACACGTGGACTCGGATCTGCTGTGACACCGTCAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CAA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCAGGCTGGGCAGCCTTTaGGGGAACCTGCTGAACCCT +
Preference number: 3 (lower is better)
Translates to: AARPWVFPPGKAWSVNACRLGSL*GNLLNP
Trigger: AGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCT...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CAA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCGCTTCCCGATGCCTTTaGCCTGTGACACTCTGGCCA +
Preference number: 3 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAASRCL*PVTLWP
Trigger: TGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGC...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CAA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCGCTTCCCGATGCCTTTaGCCTGTGACACTCTGGCCA +
Preference number: 3 (lower is better)
Translates to: AARPWVFPPGKAWSVNACASRCL*PVTLWP
Trigger: TGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGC...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR GCA 72 bp GTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTaGCCGATGCCAGCGCTGCTCTTGTCTGGAGGGCCA +
Preference number: 3 (lower is better)
Translates to: VNACRQQVSGIT*PMPALLLSGGP
Trigger: TGGCCCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR CCA 72 bp CCGAGTCCACGTGTGGAAACAGCAGCCGCCCGGCCCTaGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAAT +
Preference number: 3 (lower is better)
Translates to: PSPRVETAAARP*VFPPGKAWSVN
Trigger: ATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGCTGTTTCCACACGTGGACTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CAA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCAACCACCTGCCCTTATaGACCCAGCTGAGATTGTCC +
Preference number: 3 (lower is better)
Translates to: AAARPWVFPPGKAWSVNANHLPL*TQLRLS
Trigger: GGACAATCTCAGCTGGGTCAATAAGGGCAGGTGGTT...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR GCA 72 bp CAGCCTGGCTGCCAAGAAGATGCTCCTGCTTCCCGATaGCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGG +
Preference number: 3 (lower is better)
Translates to: QPGCQEDAPASR*LLPVTLWPGAG
Trigger: CCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGAGCATCTTCTTGGCAGCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR GCA 72 bp GAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTaGTGGGGCTGGCAGTGTTGGGGAGACACGGCAGGG +
Preference number: 3 (lower is better)
Translates to: ESGWHAQSRLIA*WGWQCWGDTAG
Trigger: CCCTGCCGTGTCTCCCCAACACTGCCAGCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR TCA 72 bp GGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTaGATGCCTGCAGGCAGCAGGTGTCAGGAATCACCT +
Preference number: 3 (lower is better)
Translates to: GPGCFLQERPGQ*MPAGSRCQESP
Trigger: AGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR GCA 72 bp CTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATaGCTGCAGGCAGCAGGTGTCAGGAATCACCTGCCC +
Preference number: 3 (lower is better)
Translates to: LGVSSRKGLVSE*LQAAGVRNHLP
Trigger: GGGCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR CCA 72 bp GAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTaGGCAGATTGTTCTCACAGTGTGGAAAGCGGGTGG +
Preference number: 3 (lower is better)
Translates to: EWLRSCASRGSS*ADCSHSVESGW
Trigger: CCACCCGCTTTCCACACTGTGAGAACAATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CAA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATAAAGTGGTGCTGGCTTaGATAAGGCACGGTGCATCC +
Preference number: 3 (lower is better)
Translates to: RPGEWLRSCASRGSSWADKVVLA*IRHGAS
Trigger: GGATGCACCGTGCCTTATCAAAGCCAGCACCACTTT...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CAA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGAACCACCTGCCCTTATaGACCCAGCTGAGATTGTCC +
Preference number: 3 (lower is better)
Translates to: AAGVRNHLPDASAALVWRNHLPL*TQLRLS
Trigger: GGACAATCTCAGCTGGGTCAATAAGGGCAGGTGGTT...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CAA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAAAAGTGGTGCTGGCTTaGATAAGGCACGGTGCATCC +
Preference number: 3 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSKVVLA*IRHGAS
Trigger: GGATGCACCGTGCCTTATCAAAGCCAGCACCACTTT...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CAA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAAACCACCTGCCCTTATaGACCCAGCTGAGATTGTCC +
Preference number: 3 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSNHLPL*TQLRLS
Trigger: GGACAATCTCAGCTGGGTCAATAAGGGCAGGTGGTT...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CAA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAACCACCTGCCCTTATaGACCCAGCTGAGATTGTCC +
Preference number: 3 (lower is better)
Translates to: SCFPMPFACDTLARCRALNHLPL*TQLRLS
Trigger: GGACAATCTCAGCTGGGTCAATAAGGGCAGGTGGTT...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CAA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGGCTTCCCGATGCCTTTaGCCTGTGACACTCTGGCCA +
Preference number: 3 (lower is better)
Translates to: RKGCIWRDCRADGVTADPASRCL*PVTLWP
Trigger: TGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGC...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR GCA 72 bp AGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTaGTCTTGTCTGGAGGGCCAGACTGTCATGAAGTCA +
Preference number: 3 (lower is better)
Translates to: SRCQESPARCQR*SCLEGQTVMKS
Trigger: TGACTTCATGACAGTCTGGCCCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR GCA 72 bp GTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTaGCAGGGGCAGGCTGGGGAGAACGATGGAATTACC +
Preference number: 3 (lower is better)
Translates to: VNLLSGQLLCYS*QGQAGENDGIT
Trigger: GGTAATTCCATCGTTCTCCCCAGCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CAA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCAAAGTGGTGCTGGCTTaGATAAGGCACGGTGCATCC +
Preference number: 3 (lower is better)
Translates to: GKAWSVNACRQQVSGITCKVVLA*IRHGAS
Trigger: GGATGCACCGTGCCTTATCAAAGCCAGCACCACTTT...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR TCA 72 bp AAGAAGATGCTCCTGCTTCCCGATGCCTTTTGCCTGTaGCACTCTGGCCAGGTGCAGGGCTCTCATCGTCAC +
Preference number: 3 (lower is better)
Translates to: KKMLLLPDAFCL*HSGQVQGSHRH
Trigger: GTGACGATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGAGCATCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR GCA 72 bp TCACAAACACTCAGGCCTGGTGAGTGGCTGAGATCGTaGGCCTCCAGAGGGTCCAGTTGGGCAGATTGTTCT +
Preference number: 3 (lower is better)
Translates to: SQTLRPGEWLRS*ASRGSSWADCS
Trigger: AGAACAATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCTGAGTGTTTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR CCA 72 bp GTGTTACAGCTGCCAGGGGCAGGCTGGGGAGAACGATaGAATTACCTCATGAGGGCAGAAACTCGGCTGATG +
Preference number: 3 (lower is better)
Translates to: VLQLPGAGWGER*NYLMRAETRLM
Trigger: CATCAGCCGAGTTTCTGCCCTCATGAGGTAATTCCATCGTTCTCCCCAGCCTGCCCCTGGCAGCTGTAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR TCA 72 bp GTAGGACATGATCATTTCACAAACACTCAGGCCTGGTaGGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAG +
Preference number: 3 (lower is better)
Translates to: VGHDHFTNTQAW*VAEIVRLQRVQ
Trigger: CTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCTGAGTGTTTGTGAAATGATCATGTCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR CCA 72 bp GACATGATCATTTCACAAACACTCAGGCCTGGTGAGTaGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGG +
Preference number: 3 (lower is better)
Translates to: DMIISQTLRPGE*LRSCASRGSSW
Trigger: CCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCTGAGTGTTTGTGAAATGATCATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR CCA 72 bp AGATTCACATTACAATCCAGATACAGGGGGCTGCCGTaGCTCGCTGAACCACCTGCCCTTATTGACCCAGCT +
Preference number: 3 (lower is better)
Translates to: RFTLQSRYRGLP*LAEPPALIDPA
Trigger: AGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR GCA 72 bp CCTAAAGATTCACATTACAATCCAGATACAGGGGGCTaGCGTGGCTCGCTGAACCACCTGCCCTTATTGACC +
Preference number: 3 (lower is better)
Translates to: PKDSHYNPDTGG*RGSLNHLPLLT
Trigger: GGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CAA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGCTTCCCGATGCCTTTaGCCTGTGACACTCTGGCCA +
Preference number: 3 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGASRCL*PVTLWP
Trigger: TGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGC...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CAA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGGCTTCCCGATGCCTTTaGCCTGTGACACTCTGGCCA +
Preference number: 3 (lower is better)
Translates to: RTALRFSISHASFPWRKMASRCL*PVTLWP
Trigger: TGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGC...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CAA 90 bp CATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTCTCCAGAGGGTCCAGTaGGGCAGATTGTTCTCACAG +
Preference number: 3 (lower is better)
Translates to: HRYLPFLLAEFVWGGLRFLQRVQ*GRLFSQ
Trigger: CTGTGAGAACAATCTGCCCAACTGGACCCTCTGGAG...AAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CAA 90 bp GAAGTCAGAGTGGACTCCCTTGAGGCTTCAGGTGACCATCGATACCTACCCTTTTGGGTGGACCTCACTTaGGCCGGTTTCACAGAAATA +
Preference number: 3 (lower is better)
Translates to: EVRVDSLEASGDHRYLPFWVDLT*AGFTEI
Trigger: TATTTCTGTGAAACCGGCCAAAGTGAGGTCCACCCA...AAAGGGTAGGTATCGATGGTCACCTGAAGCCTCAAGGGAGTCCACTCTGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR GCA 72 bp TTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTaGAGGGCTCTCATCGTCACTCACCAAGTTATAAAA +
Preference number: 3 (lower is better)
Translates to: FPMPFACDTLAR*RALIVTHQVIK
Trigger: TTTTATAACTTGGTGAGTGACGATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CAA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGAACCACCTGCCCTTATaGACCCAGCTGAGATTGTCC +
Preference number: 3 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGNHLPL*TQLRLS
Trigger: GGACAATCTCAGCTGGGTCAATAAGGGCAGGTGGTT...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CAA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGAACCACCTGCCCTTATaGACCCAGCTGAGATTGTCC +
Preference number: 3 (lower is better)
Translates to: GGITLKIHITIQIQGAAVNHLPL*TQLRLS
Trigger: GGACAATCTCAGCTGGGTCAATAAGGGCAGGTGGTT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CAA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGAACCACCTGCCCTTATaGACCCAGCTGAGATTGTCC +
Preference number: 3 (lower is better)
Translates to: RTALRFSISHASFPWRKMNHLPL*TQLRLS
Trigger: GGACAATCTCAGCTGGGTCAATAAGGGCAGGTGGTT...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR GCA 72 bp TTGAGGCTTCAGGTGACCATCGATACCTACCCTTTTTaGTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTG +
Preference number: 3 (lower is better)
Translates to: LRLQVTIDTYPF*WLNLFGVASGL
Trigger: CAAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR CCA 72 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTaGCTGAATTTGTTTGGGGTGGCCTCAGGTTTGGTT +
Preference number: 3 (lower is better)
Translates to: RLQVTIDTYPFC*LNLFGVASGLV
Trigger: AACCAAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR-3UTR CAA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGAGGCTGGGCAGCCTTTaGGGGAACCTGCTGAACCCT +
Preference number: 3 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLRLGSL*GNLLNP
Trigger: AGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCT...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR GCA 72 bp AGAAACTTGCCCAAGCCCAAAGTCACGCTAGGAAGTTaGAGAACCAGAATTTGTAAAGGACAGCCCTTCGCT +
Preference number: 3 (lower is better)
Translates to: RNLPKPKVTLGS*RTRICKGQPFA
Trigger: AGCGAAGGGCTGTCCTTTACAAATTCTGGTTCTGCAACTTCCTAGCGTGACTTTGGGCTTGGGCAAGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CAA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAAGGCTGGGCAGCCTTTaGGGGAACCTGCTGAACCCT +
Preference number: 3 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLRLGSL*GNLLNP
Trigger: AGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCT...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CAA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTAGGCTGGGCAGCCTTTaGGGGAACCTGCTGAACCCT +
Preference number: 3 (lower is better)
Translates to: EHISGFLHMIQVYINSRLRLGSL*GNLLNP
Trigger: AGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCT...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CAA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGAAAGTGGTGCTGGCTTaGATAAGGCACGGTGCATCC +
Preference number: 3 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLKVVLA*IRHGAS
Trigger: GGATGCACCGTGCCTTATCAAAGCCAGCACCACTTT...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR TCA 72 bp AATTCTCGACTTCCGTGGTCCATGGACTTCAGTTTGTaGAGGGTGAGTGGCTACCATTTTTGGATCATCTAC +
Preference number: 3 (lower is better)
Translates to: NSRLPWSMDFSL*RVSGYHFWIIY
Trigger: GTAGATGATCCAAAAATGGTAGCCACTCACCCTTCACAAACTGAAGTCCATGGACCACGGAAGTCGAGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR GCA 72 bp TTTTCAAAGGCTCACTACACAAATCACACGGTCTCCTaGAAGTCTCCTGTTAGCATAAGCCTTGACAGGTCA +
Preference number: 3 (lower is better)
Translates to: FSKAHYTNHTVS*KSPVSISLDRS
Trigger: TGACCTGTCAAGGCTTATGCTAACAGGAGACTTGCAGGAGACCGTGTGATTTGTGTAGTGAGCCTTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CAA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAAAAGTGGTGCTGGCTTaGATAAGGCACGGTGCATCC +
Preference number: 3 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLKVVLA*IRHGAS
Trigger: GGATGCACCGTGCCTTATCAAAGCCAGCACCACTTT...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR-3UTR CAA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAAAACCACCTGCCCTTATaGACCCAGCTGAGATTGTCC +
Preference number: 3 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFENHLPL*TQLRLS
Trigger: GGACAATCTCAGCTGGGTCAATAAGGGCAGGTGGTT...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR GCA 72 bp AAGTTGTGTTTTTCAAGGTTCCTCAAGAAATTGTGCTaGAGACGCTGTTTAAGTTTTGAATCTACTGGTTTA +
Preference number: 3 (lower is better)
Translates to: KLCFSRFLKKLC*RRCLSFESTGL
Trigger: TAAACCAGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACACAACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGCGTCCCACACGAGTTTaGGGCGCAGCGGCCGCACGC +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLRPTRV*GAAAAR
Trigger: GCGTGCGGCCGCTGCGCCGCAAACTCGTGTGGGACG...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320246.10
ENST00000373600.7
CDS-3UTR GCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCGCCCGATGCCAGCGCTaGTCTTGTCTGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACARCQR*SCLEGQ
Trigger: CTGGCCCTCCAGACAAGAGCAGCGCTGGCATCGGGC...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCGCAGCCGCCCGGCCCTaGGTGTTTCCTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACAAARP*VFPPGK
Trigger: CTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCGTGCATCACCCGGCGTaGATGCATGTGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACVHHPA*MHVLHG
Trigger: GCCGTGGAGCACATGCATTCACGCCGGGTGATGCAC...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGGGGCGGCTGGAGCGGTaGGTCCCACACGAGTTTGCG +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRGRLER*VPHEFA
Trigger: CGCAAACTCGTGTGGGACGCACCGCTCCAGCCGCCC...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320246.10
ENST00000373600.7
CDS-3UTR GCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCTGTGGGTCAGGAGGATaGACAGGCCCCAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACCGSGG*TGPRVW
Trigger: CCACACCCTGGGGCCTGTGCATCCTCCTGACCCACA...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCCTGCGAGAGGTCCCCTaGGTCAGCCAACTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNALREVP*VSQLQH
Trigger: GTGCTGGAGTTGGCTGACGCAGGGGACCTCTCGCAG...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCCCAGATACAGGGGGCTaGCGTGGCTCGCTGAACCAC +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAPDTGG*RGSLNH
Trigger: GTGGTTCAGCGAGCCACGGCAGCCCCCTGTATCTGG...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCGTCCCCACTAGGGAGTaGGCTGCGGTGGTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACVPTRE*AAVVSE
Trigger: CTCTGAGACCACCGCAGCCCACTCCCTAGTGGGGAC...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCATCCGAGTCCACGTGTaGAAACAGCAGCCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAIRVHV*KQQPPG
Trigger: GCCGGGCGGCTGCTGTTTCCACACGTGGACTCGGAT...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCAGAGGCCGATCTCCTTaGCACAGTCCTGCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNARGRSP*HSPASP
Trigger: AGGCGAGGCAGGACTGTGTCAAGGAGATCGGCCTCT...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATGGCCTGGTGAGTGGCTaGGATCGTGCGCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RPGEWLRSCASRGSSWADGLVSG*DRAPPE
Trigger: CTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCC...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGGTGGCCGGGCTGTCCTaGCATCCTGCATGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLVAGLS*HPACQP
Trigger: AGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCAC...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCATCACCCGGCGTGAATaGATGTGCTCCACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACITRRE*MCSTAL
Trigger: CAGCGCCGTGGAGCACATGCATTCACGCCGGGTGAT...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCGGCCTGGTCAGTGAATaGCTGCAGGCAGCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAGLVSE*LQAAGV
Trigger: GACACCTGCTGCCTGCAGGCATTCACTGACCAGGCC...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGCCTCCATGGGGCATGTaGCCGGGCTGTCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLPPWGM*PGCPAI
Trigger: GATGGCAGGACAGCCCGGCCACATGCCCCATGGAGG...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCCCGATGTCAGGTCTCTaGTGGGGGTCAGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACPMSGL*WGSGQM
Trigger: CATCTGCCCTGACCCCCACCAGAGACCTGACATCGG...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGTACAGGGGGCTGCCGTaGCTCGCTGAACCACCTGCC +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLYRGLP*LAEPPA
Trigger: GGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTA...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATTGGGGCTGGCAGTGTTaGGGAGACACGGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: RPGEWLRSCASRGSSWADWGWQC*GDTAGA
Trigger: AGCCCCTGCCGTGTCTCCCCAACACTGCCAGCCCCA...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCATGGATCCTCTCCGGTaGCATGTAGTAGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACMDPLR*HVVGRP
Trigger: GGGACGCCCTACTACATGTCACCGGAGAGGATCCAT...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCGAATCTGACCATCAGTaGCATGTGGCCAGCGCCCCT +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAESDHQ*HVASAP
Trigger: AGGGGCGCTGGCCACATGTCACTGATGGTCAGATTC...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCGTGGCCGGGCTGTCCTaGCATCCTGCATGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALVAGLS*HPACQP
Trigger: AGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCAC...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGTGTGGGTCAGGAGGATaGACAGGCCCCAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRCGSGG*TGPRVW
Trigger: CCACACCCTGGGGCCTGTGCATCCTCCTGACCCACA...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGTGTGGGTCAGGAGGATaGACAGGCCCCAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLCGSGG*TGPRVW
Trigger: CCACACCCTGGGGCCTGTGCATCCTCCTGACCCACA...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCGACAGCGTGTTGGGATaGCTCTGTGGGTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACDSVLG*LCGSGG
Trigger: TCCTCCTGACCCACAGAGGCATCCCAACACGCTGTC...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCTCCTTGACACAGTCCTaGCTCGCCTTGGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACSLTQS*LALASI
Trigger: GATGGACGCCAAGGCGAGGCAGGACTGTGTCAAGGA...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATCGGCGTGAATGCATGTaGTCCACGGCGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: RPGEWLRSCASRGSSWADRRECM*STALHS
Trigger: GCTGTGCAGCGCCGTGGAGCACATGCATTCACGCCG...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCGGCTTGATGTCTCGGTaGATCACCCGGCGTGAATGC +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAGLMSR*ITRREC
Trigger: GCATTCACGCCGGGTGATGCACCGAGACATCAAGCC...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGCCAGATACAGGGGGCTaGCGTGGCTCGCTGAACCAC +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRPDTGG*RGSLNH
Trigger: GTGGTTCAGCGAGCCACGGCAGCCCCCTGTATCTGG...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAGCCCGATGCCAGCGCTaGTCTTGTCTGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSARCQR*SCLEGQ
Trigger: CTGGCCCTCCAGACAAGAGCAGCGCTGGCATCGGGC...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCACAGGCCCCAGGGTGTaGCAGAGGTTGTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNATGPRV*QRLLEL
Trigger: GAGTTCCAACAACCTCTGCCACACCCTGGGGCCTGT...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCGTTGGGATGCCTCTGTaGGTCAGGAGGATGCACAGG +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACVGMPL*VRRMHR
Trigger: CCTGTGCATCCTCCTGACCCACAGAGGCATCCCAAC...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGGTCCCCACTAGGGAGTaGGCTGCGGTGGTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLVPTRE*AAVVSE
Trigger: CTCTGAGACCACCGCAGCCCACTCCCTAGTGGGGAC...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCATGTCAGGTCTCTGGTaGGGGTCAGGGCAGATGCAC +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAMSGLW*GSGQMH
Trigger: GTGCATCTGCCCTGACCCCCACCAGAGACCTGACAT...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCTACAGGGGGCTGCCGTaGCTCGCTGAACCACCTGCC +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALYRGLP*LAEPPA
Trigger: GGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTA...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCTTGCCTGTGACACTCTaGCCAGGTGCAGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACLPVTL*PGAGLS
Trigger: TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAA...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCGAAGATGGCCCAGCCTaGCTGCCAAGAAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACEDGPA*LPRRCS
Trigger: GGAGCATCTTCTTGGCAGCCAGGCTGGGCCATCTTC...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCGAAGATGGCCCAGCCTaGCTGCCAAGAAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAEDGPA*LPRRCS
Trigger: GGAGCATCTTCTTGGCAGCCAGGCTGGGCCATCTTC...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAGCAGCCGCCCGGCCCTaGGTGTTTCCTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSAAARP*VFPPGK
Trigger: CTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGATCCGAGTCCACGTGTaGAAACAGCAGCCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLIRVHV*KQQPPG
Trigger: GCCGGGCGGCTGCTGTTTCCACACGTGGACTCGGAT...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATGGGGCTGGCAGTGTTaGGGAGACACGGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSWGWQC*GDTAGA
Trigger: AGCCCCTGCCGTGTCTCCCCAACACTGCCAGCCCCA...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCCTCAGGCCTGGTGAGTaGCTGAGATCGTGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: QGESALRPAPVLQLPGAGLRPGE*LRSCAS
Trigger: GGAGGCGCACGATCTCAGCCACTCACCAGGCCTGAG...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGCTCAGGCCTGGTGAGTaGCTGAGATCGTGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLLRPGE*LRSCAS
Trigger: GGAGGCGCACGATCTCAGCCACTCACCAGGCCTGAG...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGAGAGGCCGATCTCCTTaGCACAGTCCTGCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRRGRSP*HSPASP
Trigger: AGGCGAGGCAGGACTGTGTCAAGGAGATCGGCCTCT...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATAGAGGCCGATCTCCTTaGCACAGTCCTGCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: RPGEWLRSCASRGSSWADRGRSP*HSPASP
Trigger: AGGCGAGGCAGGACTGTGTCAAGGAGATCGGCCTCT...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCCGGTGGTCTCAGAGCTaGAGAAGCGGCCCAGACCAA +
Preference number: 4 (lower is better)
Translates to: QGESALRPAPVLQLPGAGRWSQS*RSGPDQ
Trigger: TTGGTCTGGGCCGCTTCTTCAGCTCTGAGACCACCG...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGGAAAGGCCTGGTCAGTaGATGCCTGCAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRERPGQ*MPAGSR
Trigger: CCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTC...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATAACACTCAGGCCTGGTaGGTGGCTGAGATCGTGCGC +
Preference number: 4 (lower is better)
Translates to: RPGEWLRSCASRGSSWADNTQAW*VAEIVR
Trigger: GCGCACGATCTCAGCCACTCACCAGGCCTGAGTGTT...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGACCGCCAGAGCTGTGTaGAGGTGGGTGGACCTCACT +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRTARAV*RWVDLT
Trigger: AGTGAGGTCCACCCACCTTCACACAGCTCTGGCGGT...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGTGGCCGGGCTGTCCTaGCATCCTGCATGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPVAGLS*HPACQP
Trigger: AGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCAC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCGTGGCCGGGCTGTCCTaGCATCCTGCATGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCVAGLS*HPACQP
Trigger: AGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCAC...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCCTGCGAGAGGTCCCCTaGGTCAGCCAACTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALLREVP*VSQLQH
Trigger: GTGCTGGAGTTGGCTGACGCAGGGGACCTCTCGCAG...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCTGTGCTCCACGGCGCTaGACAGCTGCACAAAGTACT +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACCAPRR*TAAQST
Trigger: AGTACTTTGTGCAGCTGTGCAGCGCCGTGGAGCACA...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCACGGCGTGAATGCATGTaGTCCACGGCGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSRRECM*STALHS
Trigger: GCTGTGCAGCGCCGTGGAGCACATGCATTCACGCCG...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCATCACCCGGCGTGAATaGATGTGCTCCACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: QGESALRPAPVLQLPGAGITRRE*MCSTAL
Trigger: CAGCGCCGTGGAGCACATGCATTCACGCCGGGTGAT...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCTGCTTGGCCACCTGGTaGACGTATCCGATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACCLATW*TYPMSG
Trigger: ACCTGACATCGGATACGTGCACCAGGTGGCCAAGCA...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCCTGGACATCCAGATGTaGATCTGCTTGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACLDIQM*ICLATW
Trigger: CCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAG...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCCTGGACATCCAGATGTaGATCTGCTTGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNALDIQM*ICLATW
Trigger: CCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAG...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCACCAGATACAGGGGGCTaGCGTGGCTCGCTGAACCAC +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSPDTGG*RGSLNH
Trigger: GTGGTTCAGCGAGCCACGGCAGCCCCCTGTATCTGG...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCGCTCCTGCTTCCCGATaGCTTTTGCCTGTGACACTC +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAAPASR*LLPVTL
Trigger: GAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGAGC...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCACCTCCATGGGGCATGTaGCCGGGCTGTCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPPPWGM*PGCPAI
Trigger: GATGGCAGGACAGCCCGGCCACATGCCCCATGGAGG...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCCCTCCATGGGGCATGTaGCCGGGCTGTCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCPPWGM*PGCPAI
Trigger: GATGGCAGGACAGCCCGGCCACATGCCCCATGGAGG...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCTGTGGCAGAGGTTGTTaGAACTCCCTCCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACCGRGC*NSLHGA
Trigger: TGCCCCATGGAGGGAGTTCCAACAACCTCTGCCACA...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGCCGATGTCAGGTCTCTaGTGGGGGTCAGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRPMSGL*WGSGQM
Trigger: CATCTGCCCTGACCCCCACCAGAGACCTGACATCGG...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGACCATCAGTGACATGTaGCCAGCGCCCCTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRTISDM*PAPLPQ
Trigger: CTGAGGGAGGGGCGCTGGCCACATGTCACTGATGGT...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCTACAGGGGGCTGCCGTaGCTCGCTGAACCACCTGCC +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCYRGLP*LAEPPA
Trigger: GGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTA...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCGCAGCCGCCCGGCCCTaGGTGTTTCCTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALIAAARP*VFPPGK
Trigger: CTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAGAGGCCGATCTCCTTaGCACAGTCCTGCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALRGRSP*HSPASP
Trigger: AGGCGAGGCAGGACTGTGTCAAGGAGATCGGCCTCT...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCGTGCATCACCCGGCGTaGATGCATGTGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCVHHPA*MHVLHG
Trigger: GCCGTGGAGCACATGCATTCACGCCGGGTGATGCAC...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCGTGCATCACCCGGCGTaGATGCATGTGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALIVHHPA*MHVLHG
Trigger: GCCGTGGAGCACATGCATTCACGCCGGGTGATGCAC...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGGATGCCTTTTGCCTGTaGCACTCTGGCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLDAFCL*HSGQVQ
Trigger: CTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATC...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAGAAAGGCCTGGTCAGTaGATGCCTGCAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSERPGQ*MPAGSR
Trigger: CCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTC...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGAGAACCAAGAGAAGGTaGGCAGGTGCACCGCCAGAG +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLRTKRR*AGAPPE
Trigger: CTCTGGCGGTGCACCTGCTCACCTTCTCTTGGTTCT...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCTGTGGGTCAGGAGGATaGACAGGCCCCAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCCGSGG*TGPRVW
Trigger: CCACACCCTGGGGCCTGTGCATCCTCCTGACCCACA...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGGACAGCGTGTTGGGATaGCTCTGTGGGTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRDSVLG*LCGSGG
Trigger: TCCTCCTGACCCACAGAGGCATCCCAACACGCTGTC...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGTCCTTGACACAGTCCTaGCTCGCCTTGGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLSLTQS*LALASI
Trigger: GATGGACGCCAAGGCGAGGCAGGACTGTGTCAAGGA...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCCTGCGAGAGGTCCCCTaGGTCAGCCAACTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALILREVP*VSQLQH
Trigger: GTGCTGGAGTTGGCTGACGCAGGGGACCTCTCGCAG...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCCGGCGTGAATGCATGTaGTCCACGGCGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCRRECM*STALHS
Trigger: GCTGTGCAGCGCCGTGGAGCACATGCATTCACGCCG...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCACGGCGTGAATGCATGTaGTCCACGGCGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPRRECM*STALHS
Trigger: GCTGTGCAGCGCCGTGGAGCACATGCATTCACGCCG...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCCGGCGTGAATGCATGTaGTCCACGGCGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALIRRECM*STALHS
Trigger: GCTGTGCAGCGCCGTGGAGCACATGCATTCACGCCG...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCACCCGGCGTGAATaGATGTGCTCCACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALITRRE*MCSTAL
Trigger: CAGCGCCGTGGAGCACATGCATTCACGCCGGGTGAT...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGGGCTTGATGTCTCGGTaGATCACCCGGCGTGAATGC +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRGLMSR*ITRREC
Trigger: GCATTCACGCCGGGTGATGCACCGAGACATCAAGCC...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGGACACTCTGGCCAGGTaGAGGGCTCTCATCGTCACT +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRDTLAR*RALIVT
Trigger: AGTGACGATGAGAGCCCTGCACCTGGCCAGAGTGTC...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGGACACTCTGGCCAGGTaGAGGGCTCTCATCGTCACT +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLDTLAR*RALIVT
Trigger: AGTGACGATGAGAGCCCTGCACCTGGCCAGAGTGTC...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCGCCCGATGCCAGCGCTaGTCTTGTCTGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSARCQR*SCLEGQ
Trigger: CTGGCCCTCCAGACAAGAGCAGCGCTGGCATCGGGC...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGGCCCGATGCCAGCGCTaGTCTTGTCTGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSARCQR*SCLEGQ
Trigger: CTGGCCCTCCAGACAAGAGCAGCGCTGGCATCGGGC...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATGAATCACCTGCCCGATaGCAGCGCTGCTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: RPGEWLRSCASRGSSWADESPAR*QRCSCL
Trigger: CAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTC...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCGTGTCAGGAATCACCTaGCCGATGCCAGCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALVSGIT*PMPALL
Trigger: GAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACAC...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCGGCCTGGTCAGTGAATaGCTGCAGGCAGCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALGLVSE*LQAAGV
Trigger: GACACCTGCTGCCTGCAGGCATTCACTGACCAGGCC...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCGAGTGGCTGAGATCGTaGGCCTCCAGAGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALEWLRS*ASRGSS
Trigger: ACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTC...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGCCTCCATGGGGCATGTaGCCGGGCTGTCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSPPWGM*PGCPAI
Trigger: GATGGCAGGACAGCCCGGCCACATGCCCCATGGAGG...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCACAGGCCCCAGGGTGTaGCAGAGGTTGTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: QGESALRPAPVLQLPGAGTGPRV*QRLLEL
Trigger: GAGTTCCAACAACCTCTGCCACACCCTGGGGCCTGT...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGGTTGGGATGCCTCTGTaGGTCAGGAGGATGCACAGG +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRVGMPL*VRRMHR
Trigger: CCTGTGCATCCTCCTGACCCACAGAGGCATCCCAAC...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCGAAAAGACAGCGTGTTaGGATGCCTCTGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACEKTAC*DASVGQ
Trigger: CTGACCCACAGAGGCATCCCAACACGCTGTCTTTTC...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCAGTCCTGCCTCGCCTTaGCGTCCATCATCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACSPASP*RPSSQR
Trigger: TCTTTGAGATGATGGACGCCAAGGCGAGGCAGGACT...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCGTCCCCACTAGGGAGTaGGCTGCGGTGGTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCVPTRE*AAVVSE
Trigger: CTCTGAGACCACCGCAGCCCACTCCCTAGTGGGGAC...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGATGTCAGGTCTCTGGTaGGGGTCAGGGCAGATGCAC +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRMSGLW*GSGQMH
Trigger: GTGCATCTGCCCTGACCCCCACCAGAGACCTGACAT...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCACCGATGTCAGGTCTCTaGTGGGGGTCAGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSPMSGL*WGSGQM
Trigger: CATCTGCCCTGACCCCCACCAGAGACCTGACATCGG...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCATCTGCTTGGCCACCTaGTGCACGTATCCGATGTCA +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACICLAT*CTYPMS
Trigger: TGACATCGGATACGTGCACCAGGTGGCCAAGCAGAT...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCATCTGCTTGGCCACCTaGTGCACGTATCCGATGTCA +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAICLAT*CTYPMS
Trigger: TGACATCGGATACGTGCACCAGGTGGCCAAGCAGAT...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTCCACGCTCAGGTGCTaGACATCCAGATGTGCATCT +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNASTLRC*TSRCAS
Trigger: AGATGCACATCTGGATGTCCAGCACCTGAGCGTGGA...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGTACAGGGGGCTGCCGTaGCTCGCTGAACCACCTGCC +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSYRGLP*LAEPPA
Trigger: GGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTA...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCTTGCCTGTGACACTCTaGCCAGGTGCAGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: QGESALRPAPVLQLPGAGLPVTL*PGAGLS
Trigger: TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAA...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCGAAGATGGCCCAGCCTaGCTGCCAAGAAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: QGESALRPAPVLQLPGAGEDGPA*LPRRCS
Trigger: GGAGCATCTTCTTGGCAGCCAGGCTGGGCCATCTTC...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGCCTCCAGGAAAGGCCTaGTCAGTGAATGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLPPGKA*SVNACR
Trigger: CCTGCAGGCATTCACTGACCAGGCCTTTCCTGGAGG...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGGCAGCCGCCCGGCCCTaGGTGTTTCCTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSAAARP*VFPPGK
Trigger: CTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGGCAGCCGCCCGGCCCTaGGTGTTTCCTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPAAARP*VFPPGK
Trigger: CTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCGCAGCCGCCCGGCCCTaGGTGTTTCCTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSAAARP*VFPPGK
Trigger: CTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCATCCGAGTCCACGTGTaGAAACAGCAGCCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALIIRVHV*KQQPPG
Trigger: GCCGGGCGGCTGCTGTTTCCACACGTGGACTCGGAT...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAATCCGAGTCCACGTGTaGAAACAGCAGCCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPIRVHV*KQQPPG
Trigger: GCCGGGCGGCTGCTGTTTCCACACGTGGACTCGGAT...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCATCCGAGTCCACGTGTaGAAACAGCAGCCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCIRVHV*KQQPPG
Trigger: GCCGGGCGGCTGCTGTTTCCACACGTGGACTCGGAT...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGCTGCCAGGGGCAGGCTaGGGAGAACGATGGAATTAC +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRLPGAG*GERWNY
Trigger: GTAATTCCATCGTTCTCCCCAGCCTGCCCCTGGCAG...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCTGGGGCTGGCAGTGTTaGGGAGACACGGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: HSVESGWHAQSRLIACWGWGWQC*GDTAGA
Trigger: AGCCCCTGCCGTGTCTCCCCAACACTGCCAGCCCCA...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAATTGCGTGCTGGGGCTaGCAGTGTTGGGGAGACACG +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSIACWG*QCWGDT
Trigger: CGTGTCTCCCCAACACTGCCAGCCCCAGCACGCAAT...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGCAGTCAGCCAACCCTTaGACTCCTGTGCGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRQSANP*TPVRLR
Trigger: CCGAAGACGCACAGGAGTCCAAGGGTTGGCTGACTG...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373603.5
ENST00000540326.5
CDS-3UTR TCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGCCTTGTACACCTCGCTaGACTGTCCTCGGCCTATCT +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLPCTPR*TVLGLS
Trigger: AGATAGGCCGAGGACAGTTCAGCGAGGTGTACAAGG...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGGTGCATCACCCGGCGTaGATGCATGTGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPVHHPA*MHVLHG
Trigger: GCCGTGGAGCACATGCATTCACGCCGGGTGATGCAC...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCGTGCATCACCCGGCGTaGATGCATGTGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: HSVESGWHAQSRLIACWGVHHPA*MHVLHG
Trigger: GCCGTGGAGCACATGCATTCACGCCGGGTGATGCAC...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGGTGCATCACCCGGCGTaGATGCATGTGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSVHHPA*MHVLHG
Trigger: GCCGTGGAGCACATGCATTCACGCCGGGTGATGCAC...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCCGGTGGTCTCAGAGCTaGAGAAGCGGCCCAGACCAA +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCRWSQS*RSGPDQ
Trigger: TTGGTCTGGGCCGCTTCTTCAGCTCTGAGACCACCG...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCCGGTGGTCTCAGAGCTaGAGAAGCGGCCCAGACCAA +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALIRWSQS*RSGPDQ
Trigger: TTGGTCTGGGCCGCTTCTTCAGCTCTGAGACCACCG...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAGAATCTGACCATCAGTaGCATGTGGCCAGCGCCCCT +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSESDHQ*HVASAP
Trigger: AGGGGCGCTGGCCACATGTCACTGATGGTCAGATTC...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAGATGCCTTTTGCCTGTaGCACTCTGGCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSDAFCL*HSGQVQ
Trigger: CTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATC...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCGAAAGGCCTGGTCAGTaGATGCCTGCAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCERPGQ*MPAGSR
Trigger: CCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTC...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATGAGAACATTCCAGGGTaGATCTGCTCTCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RPGEWLRSCASRGSSWADENIPG*ICSQAS
Trigger: GCTGGCCTGAGAGCAGATTCACCCTGGAATGTTCTC...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATATGCACAAAGTAGGTTaGTTGCGTGCTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RPGEWLRSCASRGSSWADMHKVG*LRAGAG
Trigger: GCCAGCCCCAGCACGCAATCAACCTACTTTGTGCAT...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCCTCCTGCCGGAAATaGGCTGCCTCCCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSSSCRK*AASQQT
Trigger: AGTTTGCTGGGAGGCAGCTCATTTCCGGCAGGAGGA...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373600.7
ENST00000394199.6
CDS-3UTR GCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGTGTGGGTCAGGAGGATaGACAGGCCCCAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPCGSGG*TGPRVW
Trigger: CCACACCCTGGGGCCTGTGCATCCTCCTGACCCACA...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCGACAGCGTGTTGGGATaGCTCTGTGGGTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALDSVLG*LCGSGG
Trigger: TCCTCCTGACCCACAGAGGCATCCCAACACGCTGTC...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCTCCTTGACACAGTCCTaGCTCGCCTTGGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALSLTQS*LALASI
Trigger: GATGGACGCCAAGGCGAGGCAGGACTGTGTCAAGGA...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCAAGTACTTGATCATCTaGGAGAGGTCCCCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACKYLII*ERSPAS
Trigger: TGACGCAGGGGACCTCTCGCAGATGATCAAGTACTT...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCAAGTACTTGATCATCTaGGAGAGGTCCCCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAKYLII*ERSPAS
Trigger: TGACGCAGGGGACCTCTCGCAGATGATCAAGTACTT...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCACGGCGCTGCACAGCTaGACAAAGTACTTCCATACT +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACTALHS*TKYFHT
Trigger: AGTATGGAAGTACTTTGTGCAGCTGTGCAGCGCCGT...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCTGTGCTCCACGGCGCTaGACAGCTGCACAAAGTACT +
Preference number: 4 (lower is better)
Translates to: QGESALRPAPVLQLPGAGCAPRR*TAAQST
Trigger: AGTACTTTGTGCAGCTGTGCAGCGCCGTGGAGCACA...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAATCACCCGGCGTGAATaGATGTGCTCCACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPITRRE*MCSTAL
Trigger: CAGCGCCGTGGAGCACATGCATTCACGCCGGGTGAT...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGTGCTTGGCCACCTGGTaGACGTATCCGATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLCLATW*TYPMSG
Trigger: ACCTGACATCGGATACGTGCACCAGGTGGCCAAGCA...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGATCCAGATGTGCATCTaGTTGGCCACCTGGTGCACG +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLIQMCI*LATWCT
Trigger: CGTGCACCAGGTGGCCAAGCAGATGCACATCTGGAT...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGCTGGACATCCAGATGTaGATCTGCTTGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRLDIQM*ICLATW
Trigger: CCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAG...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATGCATCCACGCTCAGGTaGTGGACATCCAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: RPGEWLRSCASRGSSWADASTLR*WTSRCA
Trigger: TGCACATCTGGATGTCCAGCACCTGAGCGTGGATGC...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCCCAGATACAGGGGGCTaGCGTGGCTCGCTGAACCAC +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSPDTGG*RGSLNH
Trigger: GTGGTTCAGCGAGCCACGGCAGCCCCCTGTATCTGG...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGCCAGATACAGGGGGCTaGCGTGGCTCGCTGAACCAC +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPPDTGG*RGSLNH
Trigger: GTGGTTCAGCGAGCCACGGCAGCCCCCTGTATCTGG...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCGACACTCTGGCCAGGTaGAGGGCTCTCATCGTCACT +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALDTLAR*RALIVT
Trigger: AGTGACGATGAGAGCCCTGCACCTGGCCAGAGTGTC...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGGCTCCTGCTTCCCGATaGCTTTTGCCTGTGACACTC +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRAPASR*LLPVTL
Trigger: GAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGAGC...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATGGCCCAGCCTGGCTaGCAAGAAGATGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALMAQPG*QEDAPA
Trigger: AGCAGGAGCATCTTCTTGGCAGCCAGGCTGGGCCAT...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAGAATCACCTGCCCGATaGCAGCGCTGCTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSESPAR*QRCSCL
Trigger: CAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTC...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGTGGTCAGTGAATGCCTaGAGGCAGCAGGTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLWSVNA*RQQVSG
Trigger: TCCTGACACCTGCTGCCTGCAGGCATTCACTGACCA...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGGCCTGGTCAGTGAATaGCTGCAGGCAGCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPGLVSE*LQAAGV
Trigger: GACACCTGCTGCCTGCAGGCATTCACTGACCAGGCC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGAGTGGCTGAGATCGTaGGCCTCCAGAGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPEWLRS*ASRGSS
Trigger: ACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAACAGGCCCCAGGGTGTaGCAGAGGTTGTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSTGPRV*QRLLEL
Trigger: GAGTTCCAACAACCTCTGCCACACCCTGGGGCCTGT...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCACAGGCCCCAGGGTGTaGCAGAGGTTGTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALTGPRV*QRLLEL
Trigger: GAGTTCCAACAACCTCTGCCACACCCTGGGGCCTGT...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAGTTGGGATGCCTCTGTaGGTCAGGAGGATGCACAGG +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSVGMPL*VRRMHR
Trigger: CCTGTGCATCCTCCTGACCCACAGAGGCATCCCAAC...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCGTTGGGATGCCTCTGTaGGTCAGGAGGATGCACAGG +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALVGMPL*VRRMHR
Trigger: CCTGTGCATCCTCCTGACCCACAGAGGCATCCCAAC...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGGTCCCCACTAGGGAGTaGGCTGCGGTGGTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSVPTRE*AAVVSE
Trigger: CTCTGAGACCACCGCAGCCCACTCCCTAGTGGGGAC...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCACCGATGTCAGGTCTCTaGTGGGGGTCAGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPPMSGL*WGSGQM
Trigger: CATCTGCCCTGACCCCCACCAGAGACCTGACATCGG...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCACCTCCAGGAAAGGCCTaGTCAGTGAATGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSPPGKA*SVNACR
Trigger: CCTGCAGGCATTCACTGACCAGGCCTTTCCTGGAGG...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCCCTCCAGGAAAGGCCTaGTCAGTGAATGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALPPGKA*SVNACR
Trigger: CCTGCAGGCATTCACTGACCAGGCCTTTCCTGGAGG...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCCTGCCAGGGGCAGGCTaGGGAGAACGATGGAATTAC +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALLPGAG*GERWNY
Trigger: GTAATTCCATCGTTCTCCCCAGCCTGCCCCTGGCAG...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCAGTGTGGAAAGCGGGTaGCATGCACAAAGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNASVESG*HAQSRL
Trigger: CAACCTACTTTGTGCATGCCACCCGCTTTCCACACT...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCTCCAGAGGGTCCAGTTaGGCAGATTGTTCTCACAGT +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACSRGSS*ADCSHS
Trigger: ACTGTGAGAACAATCTGCCCAACTGGACCCTCTGGA...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR CAA 72 bp GGCTGCCAAGAAGATGCTCCTGCTTCCCGATGCCTTTaGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: GCQEDAPASRCL*PVTLWPGAGLS
Trigger: TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGAGCATCTTCTTGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCAGAGGCCGATCTCCTTaGCACAGTCCTGCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSRGRSP*HSPASP
Trigger: AGGCGAGGCAGGACTGTGTCAAGGAGATCGGCCTCT...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGCGGTGGTCTCAGAGCTaGAGAAGCGGCCCAGACCAA +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPRWSQS*RSGPDQ
Trigger: TTGGTCTGGGCCGCTTCTTCAGCTCTGAGACCACCG...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCATGGATCCTCTCCGGTaGCATGTAGTAGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALIMDPLR*HVVGRP
Trigger: GGGACGCCCTACTACATGTCACCGGAGAGGATCCAT...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCACCAGATGTCGGACTTaGAGTTGTAGCCGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACTRCRT*SCSRSH
Trigger: ATGAGAACGGCTACAACTTCAAGTCCGACATCTGGT...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCAAGGACTTTGGAATCTaGCCATCAGTGACATGTGGC +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACKDFGI*PSVTCG
Trigger: GCCACATGTCACTGATGGTCAGATTCCAAAGTCCTT...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCAAGGACTTTGGAATCTaGCCATCAGTGACATGTGGC +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAKDFGI*PSVTCG
Trigger: GCCACATGTCACTGATGGTCAGATTCCAAAGTCCTT...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCGATGCCTTTTGCCTGTaGCACTCTGGCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALIDAFCL*HSGQVQ
Trigger: CTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATC...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGATGCCTTTTGCCTGTaGCACTCTGGCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPDAFCL*HSGQVQ
Trigger: CTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCGAAAGGCCTGGTCAGTaGATGCCTGCAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSERPGQ*MPAGSR
Trigger: CCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTC...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGCAGGCGACAGGGACTTaGTTGTTCTGTGGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRQATGT*LFCGEN
Trigger: GTTCTCTCCACAGAACAATCAAGTCCCTGTCGCCTG...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCACCGCCAGAGCTGTGTaGAGGTGGGTGGACCTCACT +
Preference number: 4 (lower is better)
Translates to: HSVESGWHAQSRLIACWGTARAV*RWVDLT
Trigger: AGTGAGGTCCACCCACCTTCACACAGCTCTGGCGGT...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCGACAGCGTGTTGGGATaGCTCTGTGGGTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCDSVLG*LCGSGG
Trigger: TCCTCCTGACCCACAGAGGCATCCCAACACGCTGTC...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCGACAGCGTGTTGGGATaGCTCTGTGGGTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALIDSVLG*LCGSGG
Trigger: TCCTCCTGACCCACAGAGGCATCCCAACACGCTGTC...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATGTGCTCCACGGCGCTaGACAGCTGCACAAAGTACT +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSCAPRR*TAAQST
Trigger: AGTACTTTGTGCAGCTGTGCAGCGCCGTGGAGCACA...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGGCTTGATGTCTCGGTaGATCACCCGGCGTGAATGC +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPGLMSR*ITRREC
Trigger: GCATTCACGCCGGGTGATGCACCGAGACATCAAGCC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATGCTTGGCCACCTGGTaGACGTATCCGATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSCLATW*TYPMSG
Trigger: ACCTGACATCGGATACGTGCACCAGGTGGCCAAGCA...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCTGCTTGGCCACCTGGTaGACGTATCCGATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALCLATW*TYPMSG
Trigger: ACCTGACATCGGATACGTGCACCAGGTGGCCAAGCA...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAATCCAGATGTGCATCTaGTTGGCCACCTGGTGCACG +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSIQMCI*LATWCT
Trigger: CGTGCACCAGGTGGCCAAGCAGATGCACATCTGGAT...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCGCATCCACGCTCAGGTaGTGGACATCCAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALASTLR*WTSRCA
Trigger: TGCACATCTGGATGTCCAGCACCTGAGCGTGGATGC...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCGACACTCTGGCCAGGTaGAGGGCTCTCATCGTCACT +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALIDTLAR*RALIVT
Trigger: AGTGACGATGAGAGCCCTGCACCTGGCCAGAGTGTC...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGACACTCTGGCCAGGTaGAGGGCTCTCATCGTCACT +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPDTLAR*RALIVT
Trigger: AGTGACGATGAGAGCCCTGCACCTGGCCAGAGTGTC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCTGGCTGCCAAGAAGATaGTCCTGCTTCCCGATGCCT +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALWLPRR*SCFPMP
Trigger: AGGCATCGGGAAGCAGGAGCATCTTCTTGGCAGCCA...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCGAATCACCTGCCCGATaGCAGCGCTGCTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCESPAR*QRCSCL
Trigger: CAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTC...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCGTGTCAGGAATCACCTaGCCGATGCCAGCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSVSGIT*PMPALL
Trigger: GAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACAC...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGGTGTCAGGAATCACCTaGCCGATGCCAGCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPVSGIT*PMPALL
Trigger: GAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACAC...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCTGGTCAGTGAATGCCTaGAGGCAGCAGGTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALWSVNA*RQQVSG
Trigger: TCCTGACACCTGCTGCCTGCAGGCATTCACTGACCA...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCGAGTGGCTGAGATCGTaGGCCTCCAGAGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSEWLRS*ASRGSS
Trigger: ACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTC...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCACAGGCCCCAGGGTGTaGCAGAGGTTGTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALITGPRV*QRLLEL
Trigger: GAGTTCCAACAACCTCTGCCACACCCTGGGGCCTGT...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCACAGGCCCCAGGGTGTaGCAGAGGTTGTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCTGPRV*QRLLEL
Trigger: GAGTTCCAACAACCTCTGCCACACCCTGGGGCCTGT...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCATGTCAGGTCTCTGGTaGGGGTCAGGGCAGATGCAC +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCMSGLW*GSGQMH
Trigger: GTGCATCTGCCCTGACCCCCACCAGAGACCTGACAT...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGCCGATGTCAGGTCTCTaGTGGGGGTCAGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPPMSGL*WGSGQM
Trigger: CATCTGCCCTGACCCCCACCAGAGACCTGACATCGG...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGATCTGCTTGGCCACCTaGTGCACGTATCCGATGTCA +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRICLAT*CTYPMS
Trigger: TGACATCGGATACGTGCACCAGGTGGCCAAGCAGAT...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGAGATGTGCATCTGCTTaGCCACCTGGTGCACGTATC +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLRCASA*PPGARI
Trigger: GATACGTGCACCAGGTGGCCAAGCAGATGCACATCT...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGACCATCAGTGACATGTaGCCAGCGCCCCTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPTISDM*PAPLPQ
Trigger: CTGAGGGAGGGGCGCTGGCCACATGTCACTGATGGT...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCTTGCCTGTGACACTCTaGCCAGGTGCAGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALILPVTL*PGAGLS
Trigger: TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAA...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCAGGAAAGGCTGCATATaGAGAGACTGTCGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: QGESALRPAPVLQLPGAGRKGCI*RDCRAD
Trigger: GTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATAGGAAAGGCTGCATATaGAGAGACTGTCGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RPGEWLRSCASRGSSWADRKGCI*RDCRAD
Trigger: GTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCGGCTGGGGAGAACGATaGAATTACCTCATGAGGGCA +
Preference number: 4 (lower is better)
Translates to: QGESALRPAPVLQLPGAGGWGER*NYLMRA
Trigger: TGCCCTCATGAGGTAATTCCATCGTTCTCCCCAGCC...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCACTGTGTGAAGGTGGGTaGACCTCACTTTGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSLCEGG*TSLWPV
Trigger: AACCGGCCAAAGTGAGGTCCACCCACCTTCACACAG...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGATGGATCCTCTCCGGTaGCATGTAGTAGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPMDPLR*HVVGRP
Trigger: GGGACGCCCTACTACATGTCACCGGAGAGGATCCAT...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATGGCAGATGCACATGCTaGCCAGTTCTCGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: RPGEWLRSCASRGSSWADGRCTC*PVLVTS
Trigger: AGAAGTTACGAGAACTGGTCAGCATGTGCATCTGCC...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGGGCAGATGCACATGCTaGCCAGTTCTCGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRGRCTC*PVLVTS
Trigger: AGAAGTTACGAGAACTGGTCAGCATGTGCATCTGCC...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGGAATCTGACCATCAGTaGCATGTGGCCAGCGCCCCT +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSESDHQ*HVASAP
Trigger: AGGGGCGCTGGCCACATGTCACTGATGGTCAGATTC...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGGATGCCTTTTGCCTGTaGCACTCTGGCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSDAFCL*HSGQVQ
Trigger: CTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATC...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGCAGCATTCAAGGAGGTaGCGAAGTTCCTGGTACACA +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLQHSRR*RSSWYT
Trigger: TGTGTACCAGGAACTTCGTCACCTCCTTGAATGCTG...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCAAATCCTGGGATTACTaGATGGGGCCTGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: QGESALRPAPVLQLPGAGKSWDY*MGPGKL
Trigger: CAACTTCCCAGGCCCCATTCAGTAATCCCAGGATTT...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCATGCACAAAGTAGGTTaGTTGCGTGCTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCMHKVG*LRAGAG
Trigger: GCCAGCCCCAGCACGCAATCAACCTACTTTGTGCAT...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCATGCACAAAGTAGGTTaGTTGCGTGCTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALIMHKVG*LRAGAG
Trigger: GCCAGCCCCAGCACGCAATCAACCTACTTTGTGCAT...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCGACAGCGTGTTGGGATaGCTCTGTGGGTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSDSVLG*LCGSGG
Trigger: TCCTCCTGACCCACAGAGGCATCCCAACACGCTGTC...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGTCCTTGACACAGTCCTaGCTCGCCTTGGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSSLTQS*LALASI
Trigger: GATGGACGCCAAGGCGAGGCAGGACTGTGTCAAGGA...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGAAGTACTTGATCATCTaGGAGAGGTCCCCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRKYLII*ERSPAS
Trigger: TGACGCAGGGGACCTCTCGCAGATGATCAAGTACTT...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATACGGCGCTGCACAGCTaGACAAAGTACTTCCATACT +
Preference number: 4 (lower is better)
Translates to: RPGEWLRSCASRGSSWADTALHS*TKYFHT
Trigger: AGTATGGAAGTACTTTGTGCAGCTGTGCAGCGCCGT...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGGGCTTGATGTCTCGGTaGATCACCCGGCGTGAATGC +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSGLMSR*ITRREC
Trigger: GCATTCACGCCGGGTGATGCACCGAGACATCAAGCC...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGGGCTTGATGTCTCGGTaGATCACCCGGCGTGAATGC +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPGLMSR*ITRREC
Trigger: GCATTCACGCCGGGTGATGCACCGAGACATCAAGCC...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCTGCTTGGCCACCTGGTaGACGTATCCGATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCCLATW*TYPMSG
Trigger: ACCTGACATCGGATACGTGCACCAGGTGGCCAAGCA...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCCTGGACATCCAGATGTaGATCTGCTTGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCLDIQM*ICLATW
Trigger: CCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAG...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCACTGGACATCCAGATGTaGATCTGCTTGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPLDIQM*ICLATW
Trigger: CCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAG...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGCATCCACGCTCAGGTaGTGGACATCCAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPASTLR*WTSRCA
Trigger: TGCACATCTGGATGTCCAGCACCTGAGCGTGGATGC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCGCATCCACGCTCAGGTaGTGGACATCCAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCASTLR*WTSRCA
Trigger: TGCACATCTGGATGTCCAGCACCTGAGCGTGGATGC...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCAATCACACGGTCTCCTaGAAGTCTCCTGTTAGCATA +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNANHTVS*KSPVSI
Trigger: TATGCTAACAGGAGACTTGCAGGAGACCGTGTGATT...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCGCTCCTGCTTCCCGATaGCTTTTGCCTGTGACACTC +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCAPASR*LLPVTL
Trigger: GAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGAGC...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCGCTCCTGCTTCCCGATaGCTTTTGCCTGTGACACTC +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALIAPASR*LLPVTL
Trigger: GAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGAGC...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGCTCCTGCTTCCCGATaGCTTTTGCCTGTGACACTC +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPAPASR*LLPVTL
Trigger: GAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGAGC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGATGGCCCAGCCTGGCTaGCAAGAAGATGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPMAQPG*QEDAPA
Trigger: AGCAGGAGCATCTTCTTGGCAGCCAGGCTGGGCCAT...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCATGGCCCAGCCTGGCTaGCAAGAAGATGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HSVESGWHAQSRLIACWGMAQPG*QEDAPA
Trigger: AGCAGGAGCATCTTCTTGGCAGCCAGGCTGGGCCAT...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCATGGCCCAGCCTGGCTaGCAAGAAGATGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSMAQPG*QEDAPA
Trigger: AGCAGGAGCATCTTCTTGGCAGCCAGGCTGGGCCAT...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGATGGCCCAGCCTGGCTaGCAAGAAGATGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSMAQPG*QEDAPA
Trigger: AGCAGGAGCATCTTCTTGGCAGCCAGGCTGGGCCAT...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCTGGTCAGTGAATGCCTaGAGGCAGCAGGTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCWSVNA*RQQVSG
Trigger: TCCTGACACCTGCTGCCTGCAGGCATTCACTGACCA...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCACCCTTGGACTCCTGTaGGTCTTCGGATTCCCCATC +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCTLGLL*VFGFPI
Trigger: GATGGGGAATCCGAAGACGCACAGGAGTCCAAGGGT...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373603.5
ENST00000540326.5
CDS-3UTR GCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGCTTATGATGAGGGTCTaGAGTCAGCCAACCCTTGGA +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRLMMRV*SQPTLG
Trigger: TCCAAGGGTTGGCTGACTGCAGACCCTCATCATAAG...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373603.5
ENST00000540326.5
CDS-3UTR CCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCTGTGGCAGAGGTTGTTaGAACTCCCTCCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALICGRGC*NSLHGA
Trigger: TGCCCCATGGAGGGAGTTCCAACAACCTCTGCCACA...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCATGTGGCAGAGGTTGTTaGAACTCCCTCCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPCGRGC*NSLHGA
Trigger: TGCCCCATGGAGGGAGTTCCAACAACCTCTGCCACA...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCGAAAAGACAGCGTGTTaGGATGCCTCTGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALEKTAC*DASVGQ
Trigger: CTGACCCACAGAGGCATCCCAACACGCTGTCTTTTC...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAAGTCCTGCCTCGCCTTaGCGTCCATCATCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSSPASP*RPSSQR
Trigger: TCTTTGAGATGATGGACGCCAAGGCGAGGCAGGACT...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGATGTCAGGTCTCTGGTaGGGGTCAGGGCAGATGCAC +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPMSGLW*GSGQMH
Trigger: GTGCATCTGCCCTGACCCCCACCAGAGACCTGACAT...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCTGCTTGGCCACCTaGTGCACGTATCCGATGTCA +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALICLAT*CTYPMS
Trigger: TGACATCGGATACGTGCACCAGGTGGCCAAGCAGAT...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAAGATGTGCATCTGCTTaGCCACCTGGTGCACGTATC +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSRCASA*PPGARI
Trigger: GATACGTGCACCAGGTGGCCAAGCAGATGCACATCT...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCTCCACGCTCAGGTGCTaGACATCCAGATGTGCATCT +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALSTLRC*TSRCAS
Trigger: AGATGCACATCTGGATGTCCAGCACCTGAGCGTGGA...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCCACGCTCAGGTGCTaGACATCCAGATGTGCATCT +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSSTLRC*TSRCAS
Trigger: AGATGCACATCTGGATGTCCAGCACCTGAGCGTGGA...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCGCCTTGACAGGTCACTaGAGGAATTACCCTAAAGAT +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACALTGH*RNYPKD
Trigger: ATCTTTAGGGTAATTCCTCCAGTGACCTGTCAAGGC...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCCCTCCAGGAAAGGCCTaGTCAGTGAATGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HSVESGWHAQSRLIACWGPPGKA*SVNACR
Trigger: CCTGCAGGCATTCACTGACCAGGCCTTTCCTGGAGG...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAGGAAAGGCTGCATATaGAGAGACTGTCGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALRKGCI*RDCRAD
Trigger: GTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCCTGCCAGGGGCAGGCTaGGGAGAACGATGGAATTAC +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSLPGAG*GERWNY
Trigger: GTAATTCCATCGTTCTCCCCAGCCTGCCCCTGGCAG...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCGACTTGATTGTTCTGTaGAGAGAACATTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: AAARPWVFPPGKAWSVNADLIVL*REHSRV
Trigger: CACCCTGGAATGTTCTCTCCACAGAACAATCAAGTC...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGAGGGGCTCAGAGAGCTaGAAGCAGAATGTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRRGSES*KQNVGK
Trigger: TTTGCCAACATTCTGCTTCCAGCTCTCTGAGCCCCT...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCAGGTTGATTGCGTGCTaGGGCTGGCAGTGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: HSVESGWHAQSRLIACWGRLIAC*GWQCWG
Trigger: TCCCCAACACTGCCAGCCCCAGCACGCAATCAACCT...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGCTGGCTGAATTTGTTTaGGGTGGCCTCAGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRLAEFV*GGLRFG
Trigger: ACCAAACCTGAGGCCACCCCAAACAAATTCAGCCAG...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCTGTCAGAAGTCAGAGTaGACTCCCTTGAGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QGESALRPAPVLQLPGAGCQKSE*TPLRLQ
Trigger: CTGAAGCCTCAAGGGAGTCCACTCTGACTTCTGACA...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR CAA 72 bp GTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTaGTCTGGAGGGCCAGACTGTCATGAAGTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: VSGITCPMPALL*SGGPDCHEVSD
Trigger: GTCACTGACTTCATGACAGTCTGGCCCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
3UTR CAA 72 bp GAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATaGTTCTCACAGTGTGGAAAGCGGGTGGCATGCACA +
Preference number: 4 (lower is better)
Translates to: EIVRLQRVQLGR*FSQCGKRVACT
Trigger: TGTGCATGCCACCCGCTTTCCACACTGTGAGAACAATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCCCTTGTACACCTCGCTaGACTGTCCTCGGCCTATCT +
Preference number: 4 (lower is better)
Translates to: HSVESGWHAQSRLIACWGPCTPR*TVLGLS
Trigger: AGATAGGCCGAGGACAGTTCAGCGAGGTGTACAAGG...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATACCAGATGTCGGACTTaGAGTTGTAGCCGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: RPGEWLRSCASRGSSWADTRCRT*SCSRSH
Trigger: ATGAGAACGGCTACAACTTCAAGTCCGACATCTGGT...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGAAGGACTTTGGAATCTaGCCATCAGTGACATGTGGC +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLKDFGI*PSVTCG
Trigger: GCCACATGTCACTGATGGTCAGATTCCAAAGTCCTT...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCAAGGACTTTGGAATCTaGCCATCAGTGACATGTGGC +
Preference number: 4 (lower is better)
Translates to: QGESALRPAPVLQLPGAGKDFGI*PSVTCG
Trigger: GCCACATGTCACTGATGGTCAGATTCCAAAGTCCTT...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATGTGGCCGGGCTGTCCTaGCATCCTGCATGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDVAGLS*HPACQP
Trigger: AGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCAC...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAAAGTACTTGATCATCTaGGAGAGGTCCCCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSKYLII*ERSPAS
Trigger: TGACGCAGGGGACCTCTCGCAGATGATCAAGTACTT...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCTGTGCTCCACGGCGCTaGACAGCTGCACAAAGTACT +
Preference number: 4 (lower is better)
Translates to: HSVESGWHAQSRLIACWGCAPRR*TAAQST
Trigger: AGTACTTTGTGCAGCTGTGCAGCGCCGTGGAGCACA...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGTGCTTGGCCACCTGGTaGACGTATCCGATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPCLATW*TYPMSG
Trigger: ACCTGACATCGGATACGTGCACCAGGTGGCCAAGCA...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCTTTGATAAGGCACGGTaGATCCACGCTCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALIFDKAR*IHAQVL
Trigger: CAGCACCTGAGCGTGGATGCACCGTGCCTTATCAAA...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGGCTCCTGCTTCCCGATaGCTTTTGCCTGTGACACTC +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSAPASR*LLPVTL
Trigger: GAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGAGC...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCCCAAGAAGATGCTCCTaGTTCCCGATGCCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCPRRCS*FPMPFA
Trigger: GGCAAAAGGCATCGGGAAGCAGGAGCATCTTCTTGG...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCTGGTCAGTGAATGCCTaGAGGCAGCAGGTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSWSVNA*RQQVSG
Trigger: TCCTGACACCTGCTGCCTGCAGGCATTCACTGACCA...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCAGTAGGTTGATTGCGTaGTGGGGCTGGCAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSSRLIA*WGWQCW
Trigger: CCAACACTGCCAGCCCCAGCACGCAATCAACCTACT...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAAATGGGGTGATAAGTaGAGCACACCCTCCACCTCA +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALKWGDK*STPSTS
Trigger: TGAGGTGGAGGGTGTGCTGCACTTATCACCCCATTT...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCTGTGGCAGAGGTTGTTaGAACTCCCTCCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: HSVESGWHAQSRLIACWGCGRGC*NSLHGA
Trigger: TGCCCCATGGAGGGAGTTCCAACAACCTCTGCCACA...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCGAAAAGACAGCGTGTTaGGATGCCTCTGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALIEKTAC*DASVGQ
Trigger: CTGACCCACAGAGGCATCCCAACACGCTGTCTTTTC...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCGAAAAGACAGCGTGTTaGGATGCCTCTGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCEKTAC*DASVGQ
Trigger: CTGACCCACAGAGGCATCCCAACACGCTGTCTTTTC...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCATCTGCTTGGCCACCTaGTGCACGTATCCGATGTCA +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCICLAT*CTYPMS
Trigger: TGACATCGGATACGTGCACCAGGTGGCCAAGCAGAT...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAAGATGTGCATCTGCTTaGCCACCTGGTGCACGTATC +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPRCASA*PPGARI
Trigger: GATACGTGCACCAGGTGGCCAAGCAGATGCACATCT...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCATCCACGCTCAGGTGCTaGACATCCAGATGTGCATCT +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPSTLRC*TSRCAS
Trigger: AGATGCACATCTGGATGTCCAGCACCTGAGCGTGGA...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCTCCACGCTCAGGTGCTaGACATCCAGATGTGCATCT +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCSTLRC*TSRCAS
Trigger: AGATGCACATCTGGATGTCCAGCACCTGAGCGTGGA...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATTACAGGGGGCTGCCGTaGCTCGCTGAACCACCTGCC +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDYRGLP*LAEPPA
Trigger: GGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTA...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCAGGAAAGGCTGCATATaGAGAGACTGTCGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCRKGCI*RDCRAD
Trigger: GTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCAGGAAAGGCTGCATATaGAGAGACTGTCGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALIRKGCI*RDCRAD
Trigger: GTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGGCTGGGGAGAACGATaGAATTACCTCATGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPGWGER*NYLMRA
Trigger: TGCCCTCATGAGGTAATTCCATCGTTCTCCCCAGCC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCCTGTGTGAAGGTGGGTaGACCTCACTTTGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: HSVESGWHAQSRLIACWGLCEGG*TSLWPV
Trigger: AACCGGCCAAAGTGAGGTCCACCCACCTTCACACAG...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATGTCAGAAGTCAGAGTaGACTCCCTTGAGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSCQKSE*TPLRLQ
Trigger: CTGAAGCCTCAAGGGAGTCCACTCTGACTTCTGACA...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATGGACTTCAGTTTGTaGAGGGTGAGTGGCTACCAT +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALMDFSL*RVSGYH
Trigger: ATGGTAGCCACTCACCCTTCACAAACTGAAGTCCAT...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGTGGCCGGGCTGTCCTaGCATCCTGCATGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGVAGLS*HPACQP
Trigger: AGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCAC...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCTTTGGGTGGTTCAGTTaGTTCAAGAGGCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALIFGWFS*FKRPIS
Trigger: GGAGATCGGCCTCTTGAAGCAACTGAACCACCCAAA...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATCTGCGAGAGGTCCCCTaGGTCAGCCAACTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDLREVP*VSQLQH
Trigger: GTGCTGGAGTTGGCTGACGCAGGGGACCTCTCGCAG...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAAAGTACTTGATCATCTaGGAGAGGTCCCCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPKYLII*ERSPAS
Trigger: TGACGCAGGGGACCTCTCGCAGATGATCAAGTACTT...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGGGGATGAGCCGCTTCTaGTTCTTAAAGTACTTGATC +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLGMSRF*FLKYLI
Trigger: GATCAAGTACTTTAAGAAGCAGAAGCGGCTCATCCC...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCACGGCGCTGCACAGCTaGACAAAGTACTTCCATACT +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALITALHS*TKYFHT
Trigger: AGTATGGAAGTACTTTGTGCAGCTGTGCAGCGCCGT...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGTTTGATAAGGCACGGTaGATCCACGCTCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPFDKAR*IHAQVL
Trigger: CAGCACCTGAGCGTGGATGCACCGTGCCTTATCAAA...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGTTTGATAAGGCACGGTaGATCCACGCTCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSFDKAR*IHAQVL
Trigger: CAGCACCTGAGCGTGGATGCACCGTGCCTTATCAAA...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATCCAGATACAGGGGGCTaGCGTGGCTCGCTGAACCAC +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDPDTGG*RGSLNH
Trigger: GTGGTTCAGCGAGCCACGGCAGCCCCCTGTATCTGG...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGCCAAGAAGATGCTCCTaGTTCCCGATGCCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSPRRCS*FPMPFA
Trigger: GGCAAAAGGCATCGGGAAGCAGGAGCATCTTCTTGG...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCGTCACGCTAGGAAGTTaGAGAACCAGAATTTGTAAA +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACVTLGS*RTRICK
Trigger: TTTACAAATTCTGGTTCTGCAACTTCCTAGCGTGAC...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGGCCCGATGCCAGCGCTaGTCTTGTCTGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMARCQR*SCLEGQ
Trigger: CTGGCCCTCCAGACAAGAGCAGCGCTGGCATCGGGC...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGGCCCGATGCCAGCGCTaGTCTTGTCTGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVARCQR*SCLEGQ
Trigger: CTGGCCCTCCAGACAAGAGCAGCGCTGGCATCGGGC...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGGAAAAGACAGCGTGTTaGGATGCCTCTGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSEKTAC*DASVGQ
Trigger: CTGACCCACAGAGGCATCCCAACACGCTGTCTTTTC...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCAGTCCTGCCTCGCCTTaGCGTCCATCATCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSSPASP*RPSSQR
Trigger: TCTTTGAGATGATGGACGCCAAGGCGAGGCAGGACT...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGAGTCCTGCCTCGCCTTaGCGTCCATCATCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSSPASP*RPSSQR
Trigger: TCTTTGAGATGATGGACGCCAAGGCGAGGCAGGACT...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATGTCCCCACTAGGGAGTaGGCTGCGGTGGTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDVPTRE*AAVVSE
Trigger: CTCTGAGACCACCGCAGCCCACTCCCTAGTGGGGAC...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGATCTGCTTGGCCACCTaGTGCACGTATCCGATGTCA +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPICLAT*CTYPMS
Trigger: TGACATCGGATACGTGCACCAGGTGGCCAAGCAGAT...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGTCCACGCTCAGGTGCTaGACATCCAGATGTGCATCT +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSSTLRC*TSRCAS
Trigger: AGATGCACATCTGGATGTCCAGCACCTGAGCGTGGA...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCTTTGTGAAGGGTGAGTaGCTACCATTTTTGGATCAT +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACFVKGE*LPFLDH
Trigger: ATGATCCAAAAATGGTAGCCACTCACCCTTCACAAA...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGAATTCTCGACTTCCGTaGTCCATGGACTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLNSRLP*SMDFSL
Trigger: CAAACTGAAGTCCATGGACCACGGAAGTCGAGAATT...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCATCCAGAGGGTCCAGTTaGGCAGATTGTTCTCACAGT +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPSRGSS*ADCSHS
Trigger: ACTGTGAGAACAATCTGCCCAACTGGACCCTCTGGA...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGACCTACCCTTTTTGCTaGCTGAATTTGTTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRTYPFC*LNLFGV
Trigger: CACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGT...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCACCTACCCTTTTTGCTaGCTGAATTTGTTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: QGESALRPAPVLQLPGAGTYPFC*LNLFGV
Trigger: CACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGT...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR CAA 72 bp CTGCCTTCAGCATCTGCTGTAAGGCTGGGCAGCCTTTaGGGGAACCTGCTGAACCCTGTGGTCTTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: LPSASAVRLGSL*GNLLNPVVLAV
Trigger: AACAGCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCAGATGCTGAAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCCAGCATTCAAGGAGGTaGCGAAGTTCCTGGTACACA +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSQHSRR*RSSWYT
Trigger: TGTGTACCAGGAACTTCGTCACCTCCTTGAATGCTG...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGTGTGGGTCAGGAGGATaGACAGGCCCCAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGCGSGG*TGPRVW
Trigger: CCACACCCTGGGGCCTGTGCATCCTCCTGACCCACA...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCATCATCTCAAAGATCTaGACCTTCTTCAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: QGESALRPAPVLQLPGAGIISKI*TFFRAT
Trigger: AGTGGCTCTGAAGAAGGTGCAGATCTTTGAGATGAT...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGATCATCTCAAAGATCTaGACCTTCTTCAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRIISKI*TFFRAT
Trigger: AGTGGCTCTGAAGAAGGTGCAGATCTTTGAGATGAT...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGTTTGGGTGGTTCAGTTaGTTCAAGAGGCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSFGWFS*FKRPIS
Trigger: GGAGATCGGCCTCTTGAAGCAACTGAACCACCCAAA...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp CATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTCTGCGAGAGGTCCCCTaGGTCAGCCAACTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: HRYLPFLLAEFVWGGLRFLREVP*VSQLQH
Trigger: GTGCTGGAGTTGGCTGACGCAGGGGACCTCTCGCAG...AAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGCTGCGAGAGGTCCCCTaGGTCAGCCAACTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVLREVP*VSQLQH
Trigger: GTGCTGGAGTTGGCTGACGCAGGGGACCTCTCGCAG...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGCTGCGAGAGGTCCCCTaGGTCAGCCAACTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMLREVP*VSQLQH
Trigger: GTGCTGGAGTTGGCTGACGCAGGGGACCTCTCGCAG...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGACGGCGCTGCACAGCTaGACAAAGTACTTCCATACT +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSTALHS*TKYFHT
Trigger: AGTATGGAAGTACTTTGTGCAGCTGTGCAGCGCCGT...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCACGGCGCTGCACAGCTaGACAAAGTACTTCCATACT +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSTALHS*TKYFHT
Trigger: AGTATGGAAGTACTTTGTGCAGCTGTGCAGCGCCGT...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGCGGCGTGAATGCATGTaGTCCACGGCGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMRRECM*STALHS
Trigger: GCTGTGCAGCGCCGTGGAGCACATGCATTCACGCCG...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGCTTTTCTATATCCCATaGTTCCTTCCCATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRLFYIP*FLPMEE
Trigger: TTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAG...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATGGCCTGGTCAGTGAATaGCTGCAGGCAGCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDGLVSE*LQAAGV
Trigger: GACACCTGCTGCCTGCAGGCATTCACTGACCAGGCC...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCCTTATGATGAGGGTCTaGAGTCAGCCAACCCTTGGA +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSLMMRV*SQPTLG
Trigger: TCCAAGGGTTGGCTGACTGCAGACCCTCATCATAAG...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373603.5
ENST00000540326.5
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGAGGGCAGACATGAGGTaGCTGGGCCTCCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVRADMR*LGLQGA
Trigger: AGCTCCCTGGAGGCCCAGGCACCTCATGTCTGCCCT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546191.5
CDS-3UTR GCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGCCAGACGCTCCGGGGTaGACACGCACACCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLPDAPG*TRTPAG
Trigger: CCCGGCGGGTGTGCGTGTGCACCCCGGAGCGTCTGG...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545174.5
CDS-3UTR CCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGGTCCCCACTAGGGAGTaGGCTGCGGTGGTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMVPTRE*AAVVSE
Trigger: CTCTGAGACCACCGCAGCCCACTCCCTAGTGGGGAC...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGATCCGAGTCCACGTGTaGAAACAGCAGCCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVIRVHV*KQQPPG
Trigger: GCCGGGCGGCTGCTGTTTCCACACGTGGACTCGGAT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCAGGGGCTCAGAGAGCTaGAAGCAGAATGTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: HSVESGWHAQSRLIACWGRGSES*KQNVGK
Trigger: TTTGCCAACATTCTGCTTCCAGCTCTCTGAGCCCCT...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGGGGCTCAGAGAGCTaGAAGCAGAATGTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPRGSES*KQNVGK
Trigger: TTTGCCAACATTCTGCTTCCAGCTCTCTGAGCCCCT...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATATTGCGTGCTGGGGCTaGCAGTGTTGGGGAGACACG +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDIACWG*QCWGDT
Trigger: CGTGTCTCCCCAACACTGCCAGCCCCAGCACGCAAT...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GAAGTCAGAGTGGACTCCCTTGAGGCTTCAGGTGACCATCGATACCTACCCTTTAGGTTGATTGCGTGCTaGGGCTGGCAGTGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: EVRVDSLEASGDHRYLPFRLIAC*GWQCWG
Trigger: TCCCCAACACTGCCAGCCCCAGCACGCAATCAACCT...AAAGGGTAGGTATCGATGGTCACCTGAAGCCTCAAGGGAGTCCACTCTGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCAGTGTGGAAAGCGGGTaGCATGCACAAAGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSSVESG*HAQSRL
Trigger: CAACCTACTTTGTGCATGCCACCCGCTTTCCACACT...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GAAGTCAGAGTGGACTCCCTTGAGGCTTCAGGTGACCATCGATACCTACCCTTTCCTTGTACACCTCGCTaGACTGTCCTCGGCCTATCT +
Preference number: 4 (lower is better)
Translates to: EVRVDSLEASGDHRYLPFPCTPR*TVLGLS
Trigger: AGATAGGCCGAGGACAGTTCAGCGAGGTGTACAAGG...AAAGGGTAGGTATCGATGGTCACCTGAAGCCTCAAGGGAGTCCACTCTGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGCGGTGGTCTCAGAGCTaGAGAAGCGGCCCAGACCAA +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVRWSQS*RSGPDQ
Trigger: TTGGTCTGGGCCGCTTCTTCAGCTCTGAGACCACCG...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCACCAGATGTCGGACTTaGAGTTGTAGCCGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: HSVESGWHAQSRLIACWGTRCRT*SCSRSH
Trigger: ATGAGAACGGCTACAACTTCAAGTCCGACATCTGGT...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATGAATCTGACCATCAGTaGCATGTGGCCAGCGCCCCT +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDESDHQ*HVASAP
Trigger: AGGGGCGCTGGCCACATGTCACTGATGGTCAGATTC...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCATGGACTTCAGTTTGTaGAGGGTGAGTGGCTACCAT +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSMDFSL*RVSGYH
Trigger: ATGGTAGCCACTCACCCTTCACAAACTGAAGTCCAT...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGATGGACTTCAGTTTGTaGAGGGTGAGTGGCTACCAT +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSMDFSL*RVSGYH
Trigger: ATGGTAGCCACTCACCCTTCACAAACTGAAGTCCAT...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGGAAAGGCCTGGTCAGTaGATGCCTGCAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVERPGQ*MPAGSR
Trigger: CCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTC...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGGGCCTGGTGAGTGGCTaGGATCGTGCGCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTGLVSG*DRAPPE
Trigger: CTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCC...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGACCGCCAGAGCTGTGTaGAGGTGGGTGGACCTCACT +
Preference number: 4 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGTARAV*RWVDLT
Trigger: AGTGAGGTCCACCCACCTTCACACAGCTCTGGCGGT...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATTCCTCCTGCCGGAAATaGGCTGCCTCCCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDSSCRK*AASQQT
Trigger: AGTTTGCTGGGAGGCAGCTCATTTCCGGCAGGAGGA...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373600.7
ENST00000394199.6
CDS-3UTR GCA 90 bp AGCTGGAAGCAGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGCGTCCCACACGAGTTTaGGGCGCAGCGGCCGCACGC +
Preference number: 4 (lower is better)
Translates to: SWKQNVGKKLVWNQKNLQRPTRV*GAAAAR
Trigger: GCGTGCGGCCGCTGCGCCGCAAACTCGTGTGGGACG...CTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320246.10
ENST00000373600.7
CDS-3UTR GCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCGGGATGAGCCGCTTCTaGTTCTTAAAGTACTTGATC +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCGMSRF*FLKYLI
Trigger: GATCAAGTACTTTAAGAAGCAGAAGCGGCTCATCCC...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGGGATGAGCCGCTTCTaGTTCTTAAAGTACTTGATC +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPGMSRF*FLKYLI
Trigger: GATCAAGTACTTTAAGAAGCAGAAGCGGCTCATCCC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGATCACCCGGCGTGAATaGATGTGCTCCACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGITRRE*MCSTAL
Trigger: CAGCGCCGTGGAGCACATGCATTCACGCCGGGTGAT...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGATCACCCGGCGTGAATaGATGTGCTCCACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVITRRE*MCSTAL
Trigger: CAGCGCCGTGGAGCACATGCATTCACGCCGGGTGAT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCAATCACACGGTCTCCTaGAAGTCTCCTGTTAGCATA +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALINHTVS*KSPVSI
Trigger: TATGCTAACAGGAGACTTGCAGGAGACCGTGTGATT...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAAGTCAGAGTGGACTCCCTTGAGGCTTCAGGTGACCATCGATACCTACCCTTTTGGCTGCCAAGAAGATaGTCCTGCTTCCCGATGCCT +
Preference number: 4 (lower is better)
Translates to: EVRVDSLEASGDHRYLPFWLPRR*SCFPMP
Trigger: AGGCATCGGGAAGCAGGAGCATCTTCTTGGCAGCCA...AAAGGGTAGGTATCGATGGTCACCTGAAGCCTCAAGGGAGTCCACTCTGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCCTTTTCTATATCCCATaGTTCCTTCCCATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALLFYIP*FLPMEE
Trigger: TTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAG...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATGTCACGCTAGGAAGTTaGAGAACCAGAATTTGTAAA +
Preference number: 4 (lower is better)
Translates to: RPGEWLRSCASRGSSWADVTLGS*RTRICK
Trigger: TTTACAAATTCTGGTTCTGCAACTTCCTAGCGTGAC...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGGTCACGCTAGGAAGTTaGAGAACCAGAATTTGTAAA +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLVTLGS*RTRICK
Trigger: TTTACAAATTCTGGTTCTGCAACTTCCTAGCGTGAC...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGGTCACGCTAGGAAGTTaGAGAACCAGAATTTGTAAA +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRVTLGS*RTRICK
Trigger: TTTACAAATTCTGGTTCTGCAACTTCCTAGCGTGAC...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGGCCCGATGCCAGCGCTaGTCTTGTCTGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTARCQR*SCLEGQ
Trigger: CTGGCCCTCCAGACAAGAGCAGCGCTGGCATCGGGC...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGGTGTCAGGAATCACCTaGCCGATGCCAGCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVVSGIT*PMPALL
Trigger: GAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACAC...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGGTGTCAGGAATCACCTaGCCGATGCCAGCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMVSGIT*PMPALL
Trigger: GAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACAC...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGTTGATGATATTTGGGTaGTTCAGTTGCTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: AAGVRNHLPDASAALVWRLMIFG*FSCFKR
Trigger: CCTCTTGAAGCAACTGAACCACCCAAATATCATCAA...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCATACTTGATGATATTTaGGTGGTTCAGTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: AARPWVFPPGKAWSVNACILDDI*VVQLLQ
Trigger: TTGAAGCAACTGAACCACCCAAATATCATCAAGTAT...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGCCGATGTCAGGTCTCTaGTGGGGGTCAGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGPMSGL*WGSGQM
Trigger: CATCTGCCCTGACCCCCACCAGAGACCTGACATCGG...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGCCGATGTCAGGTCTCTaGTGGGGGTCAGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVPMSGL*WGSGQM
Trigger: CATCTGCCCTGACCCCCACCAGAGACCTGACATCGG...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGACCATCAGTGACATGTaGCCAGCGCCCCTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVTISDM*PAPLPQ
Trigger: CTGAGGGAGGGGCGCTGGCCACATGTCACTGATGGT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCGCCTTGACAGGTCACTaGAGGAATTACCCTAAAGAT +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALIALTGH*RNYPKD
Trigger: ATCTTTAGGGTAATTCCTCCAGTGACCTGTCAAGGC...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGCCTTGACAGGTCACTaGAGGAATTACCCTAAAGAT +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPALTGH*RNYPKD
Trigger: ATCTTTAGGGTAATTCCTCCAGTGACCTGTCAAGGC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATTTGCCTGTGACACTCTaGCCAGGTGCAGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDLPVTL*PGAGLS
Trigger: TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAA...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCCATGCTTCCTTCCCATaGAGGAAAATGCTTAACACT +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALHASFP*RKMLNT
Trigger: AGTGTTAAGCATTTTCCTCCATGGGAAGGAAGCATG...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCACATGCTTCCTTCCCATaGAGGAAAATGCTTAACACT +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSHASFP*RKMLNT
Trigger: AGTGTTAAGCATTTTCCTCCATGGGAAGGAAGCATG...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCAATTCTCGACTTCCGTaGTCCATGGACTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCNSRLP*SMDFSL
Trigger: CAAACTGAAGTCCATGGACCACGGAAGTCGAGAATT...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCAATTCTCGACTTCCGTaGTCCATGGACTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALINSRLP*SMDFSL
Trigger: CAAACTGAAGTCCATGGACCACGGAAGTCGAGAATT...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGACTTGATTGTTCTGTaGAGAGAACATTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPDLIVL*REHSRV
Trigger: CACCCTGGAATGTTCTCTCCACAGAACAATCAAGTC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGATTGCGTGCTGGGGCTaGCAGTGTTGGGGAGACACG +
Preference number: 4 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGIACWG*QCWGDT
Trigger: CGTGTCTCCCCAACACTGCCAGCCCCAGCACGCAAT...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGGAATCTGACCATCAGTaGCATGTGGCCAGCGCCCCT +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVESDHQ*HVASAP
Trigger: AGGGGCGCTGGCCACATGTCACTGATGGTCAGATTC...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp CATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTGATGCCTTTTGCCTGTaGCACTCTGGCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: HRYLPFLLAEFVWGGLRFDAFCL*HSGQVQ
Trigger: CTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATC...AAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGCTGGTTTCCTACACATaGTACAGGTGTACATTAATT +
Preference number: 4 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLLVSYT*YRCTLI
Trigger: AATTAATGTACACCTGTATCATGTGTAGGAAACCAG...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGGGGATGAGCCGCTTCTaGTTCTTAAAGTACTTGATC +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSGMSRF*FLKYLI
Trigger: GATCAAGTACTTTAAGAAGCAGAAGCGGCTCATCCC...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGCGGCGTGAATGCATGTaGTCCACGGCGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTRRECM*STALHS
Trigger: GCTGTGCAGCGCCGTGGAGCACATGCATTCACGCCG...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATTGGCTGCCAAGAAGATaGTCCTGCTTCCCGATGCCT +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDWLPRR*SCFPMP
Trigger: AGGCATCGGGAAGCAGGAGCATCTTCTTGGCAGCCA...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCCTTTTCTATATCCCATaGTTCCTTCCCATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALILFYIP*FLPMEE
Trigger: TTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAG...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCACTTTTCTATATCCCATaGTTCCTTCCCATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPLFYIP*FLPMEE
Trigger: TTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAG...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATTGGTCAGTGAATGCCTaGAGGCAGCAGGTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDWSVNA*RQQVSG
Trigger: TCCTGACACCTGCTGCCTGCAGGCATTCACTGACCA...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATAGTAGGTTGATTGCGTaGTGGGGCTGGCAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDSRLIA*WGWQCW
Trigger: CCAACACTGCCAGCCCCAGCACGCAATCAACCTACT...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATTGTGGCAGAGGTTGTTaGAACTCCCTCCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDCGRGC*NSLHGA
Trigger: TGCCCCATGGAGGGAGTTCCAACAACCTCTGCCACA...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTACAGGCCCCAGGGTGTaGCAGAGGTTGTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: HRYLPFLLAEFVWGGLRFTGPRV*QRLLEL
Trigger: GAGTTCCAACAACCTCTGCCACACCCTGGGGCCTGT...AAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGATGTCAGGTCTCTGGTaGGGGTCAGGGCAGATGCAC +
Preference number: 4 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGMSGLW*GSGQMH
Trigger: GTGCATCTGCCCTGACCCCCACCAGAGACCTGACAT...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCGCCTTGACAGGTCACTaGAGGAATTACCCTAAAGAT +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSALTGH*RNYPKD
Trigger: ATCTTTAGGGTAATTCCTCCAGTGACCTGTCAAGGC...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCCATGCTTCCTTCCCATaGAGGAAAATGCTTAACACT +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALIHASFP*RKMLNT
Trigger: AGTGTTAAGCATTTTCCTCCATGGGAAGGAAGCATG...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATTTGTGAAGGGTGAGTaGCTACCATTTTTGGATCAT +
Preference number: 4 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSFVKGE*LPFLDH
Trigger: ATGATCCAAAAATGGTAGCCACTCACCCTTCACAAA...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGCCTCCAGGAAAGGCCTaGTCAGTGAATGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVPPGKA*SVNACR
Trigger: CCTGCAGGCATTCACTGACCAGGCCTTTCCTGGAGG...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGCCTCCAGGAAAGGCCTaGTCAGTGAATGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMPPGKA*SVNACR
Trigger: CCTGCAGGCATTCACTGACCAGGCCTTTCCTGGAGG...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGATCCGAGTCCACGTGTaGAAACAGCAGCCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTIRVHV*KQQPPG
Trigger: GCCGGGCGGCTGCTGTTTCCACACGTGGACTCGGAT...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATAGCAAACTTCTCTCCTaGGCATCTCCTCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDSKLLS*ASPPGS
Trigger: GCTGCCTGGAGGAGATGCCCAGGAGAGAAGTTTGCT...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373600.7
CDS-3UTR TCA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGCCTTGTACACCTCGCTaGACTGTCCTCGGCCTATCT +
Preference number: 4 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGPCTPR*TVLGLS
Trigger: AGATAGGCCGAGGACAGTTCAGCGAGGTGTACAAGG...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GAAGTCAGAGTGGACTCCCTTGAGGCTTCAGGTGACCATCGATACCTACCCTTTCAGCATTCAAGGAGGTaGCGAAGTTCCTGGTACACA +
Preference number: 4 (lower is better)
Translates to: EVRVDSLEASGDHRYLPFQHSRR*RSSWYT
Trigger: TGTGTACCAGGAACTTCGTCACCTCCTTGAATGCTG...AAAGGGTAGGTATCGATGGTCACCTGAAGCCTCAAGGGAGTCCACTCTGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCCTGGTTTCCTACACATaGTACAGGTGTACATTAATT +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALLVSYT*YRCTLI
Trigger: AATTAATGTACACCTGTATCATGTGTAGGAAACCAG...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGTGGTAAGCACGGGCGGCTGGAGCGGTaGGTCCCACACGAGTTTGCG +
Preference number: 4 (lower is better)
Translates to: RMLAKSWSGIRKIFSGKHGRLER*VPHEFA
Trigger: CGCAAACTCGTGTGGGACGCACCGCTCCAGCCGCCC...GTGCTTACCACTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320246.10
ENST00000373600.7
CDS-3UTR GCA 90 bp AGCTGGAAGCAGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGGTGGCCGGGCTGTCCTaGCATCCTGCATGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SWKQNVGKKLVWNQKNLQVAGLS*HPACQP
Trigger: AGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCAC...CTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGATCATCTCAAAGATCTaGACCTTCTTCAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPIISKI*TFFRAT
Trigger: AGTGGCTCTGAAGAAGGTGCAGATCTTTGAGATGAT...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGATCATCTCAAAGATCTaGACCTTCTTCAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSIISKI*TFFRAT
Trigger: AGTGGCTCTGAAGAAGGTGCAGATCTTTGAGATGAT...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGTGTGCTCCACGGCGCTaGACAGCTGCACAAAGTACT +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVCAPRR*TAAQST
Trigger: AGTACTTTGTGCAGCTGTGCAGCGCCGTGGAGCACA...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGTGTGCTCCACGGCGCTaGACAGCTGCACAAAGTACT +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMCAPRR*TAAQST
Trigger: AGTACTTTGTGCAGCTGTGCAGCGCCGTGGAGCACA...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGATCCAGATGTGCATCTaGTTGGCCACCTGGTGCACG +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVIQMCI*LATWCT
Trigger: CGTGCACCAGGTGGCCAAGCAGATGCACATCTGGAT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGCTGGACATCCAGATGTaGATCTGCTTGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVLDIQM*ICLATW
Trigger: CCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAG...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGGCATCCACGCTCAGGTaGTGGACATCCAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMASTLR*WTSRCA
Trigger: TGCACATCTGGATGTCCAGCACCTGAGCGTGGATGC...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATTTTGATAAGGCACGGTaGATCCACGCTCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDFDKAR*IHAQVL
Trigger: CAGCACCTGAGCGTGGATGCACCGTGCCTTATCAAA...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATCCAAGAAGATGCTCCTaGTTCCCGATGCCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDPRRCS*FPMPFA
Trigger: GGCAAAAGGCATCGGGAAGCAGGAGCATCTTCTTGG...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGTGGCTGCCAAGAAGATaGTCCTGCTTCCCGATGCCT +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMWLPRR*SCFPMP
Trigger: AGGCATCGGGAAGCAGGAGCATCTTCTTGGCAGCCA...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGCTTTTCTATATCCCATaGTTCCTTCCCATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSLFYIP*FLPMEE
Trigger: TTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAG...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCCTTTTCTATATCCCATaGTTCCTTCCCATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSLFYIP*FLPMEE
Trigger: TTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAG...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGCTTTTCTATATCCCATaGTTCCTTCCCATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPLFYIP*FLPMEE
Trigger: TTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAG...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCGTCACGCTAGGAAGTTaGAGAACCAGAATTTGTAAA +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALIVTLGS*RTRICK
Trigger: TTTACAAATTCTGGTTCTGCAACTTCCTAGCGTGAC...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGTGGTCAGTGAATGCCTaGAGGCAGCAGGTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVWSVNA*RQQVSG
Trigger: TCCTGACACCTGCTGCCTGCAGGCATTCACTGACCA...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGGATACCTACCCTTTTTaGTGGCTGAATTTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSDTYPF*WLNLFG
Trigger: CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATC...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATCTGCCGGAAATGAGCTaGCTCCCAGCAAACTTCTCT +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDLPEMS*LPANFS
Trigger: AGAGAAGTTTGCTGGGAGGCAGCTCATTTCCGGCAG...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373600.7
ENST00000394199.6
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGACCCTTGGACTCCTGTaGGTCTTCGGATTCCCCATC +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVTLGLL*VFGFPI
Trigger: GATGGGGAATCCGAAGACGCACAGGAGTCCAAGGGT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373603.5
ENST00000540326.5
CDS-3UTR CCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGTGTGGCAGAGGTTGTTaGAACTCCCTCCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMCGRGC*NSLHGA
Trigger: TGCCCCATGGAGGGAGTTCCAACAACCTCTGCCACA...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATAGTCCTGCCTCGCCTTaGCGTCCATCATCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDSPASP*RPSSQR
Trigger: TCTTTGAGATGATGGACGCCAAGGCGAGGCAGGACT...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCATTGATGATATTTGGGTaGTTCAGTTGCTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPLMIFG*FSCFKR
Trigger: CCTCTTGAAGCAACTGAACCACCCAAATATCATCAA...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCATACTTGATGATATTTaGGTGGTTCAGTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: QGESALRPAPVLQLPGAGILDDI*VVQLLQ
Trigger: TTGAAGCAACTGAACCACCCAAATATCATCAAGTAT...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp AGCTGGAAGCAGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGTACAGGGGGCTGCCGTaGCTCGCTGAACCACCTGCC +
Preference number: 4 (lower is better)
Translates to: SWKQNVGKKLVWNQKNLQYRGLP*LAEPPA
Trigger: GGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTA...CTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCATTTGTGAAGGGTGAGTaGCTACCATTTTTGGATCAT +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPFVKGE*LPFLDH
Trigger: ATGATCCAAAAATGGTAGCCACTCACCCTTCACAAA...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGACAGCTCAGACAATTaGAAGGTTAACTTTACGTAC +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPDSSDN*KVNFTY
Trigger: GTACGTAAAGTTAACCTTCCAATTGTCTGAGCTGTC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGCTGTGTGAAGGTGGGTaGACCTCACTTTGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMLCEGG*TSLWPV
Trigger: AACCGGCCAAAGTGAGGTCCACCCACCTTCACACAG...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCCTGGTTTCCTACACATaGTACAGGTGTACATTAATT +
Preference number: 4 (lower is better)
Translates to: GKAWSVNACRQQVSGITCLVSYT*YRCTLI
Trigger: AATTAATGTACACCTGTATCATGTGTAGGAAACCAG...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCCTGGTTTCCTACACATaGTACAGGTGTACATTAATT +
Preference number: 4 (lower is better)
Translates to: CFPMPFACDTLARCRALILVSYT*YRCTLI
Trigger: AATTAATGTACACCTGTATCATGTGTAGGAAACCAG...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp AGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGTGGTAAGCACGGCCTGGTGAGTGGCTaGGATCGTGCGCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RMLAKSWSGIRKIFSGKHGLVSG*DRAPPE
Trigger: CTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCC...GTGCTTACCACTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GAACGATGGAATTACCTCATGAGGGCAGAAACTCGGCTGATGATGAGTTTCAAAAGAACCAAGAGAAGGTaGGCAGGTGCACCGCCAGAG +
Preference number: 4 (lower is better)
Translates to: ERWNYLMRAETRLMMSFKRTKRR*AGAPPE
Trigger: CTCTGGCGGTGCACCTGCTCACCTTCTCTTGGTTCT...TTTGAAACTCATCATCAGCCGAGTTTCTGCCCTCATGAGGTAATTCCATCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATTTTGGGTGGTTCAGTTaGTTCAAGAGGCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDFGWFS*FKRPIS
Trigger: GGAGATCGGCCTCTTGAAGCAACTGAACCACCCAAA...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGCGGCGTGAATGCATGTaGTCCACGGCGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLRRECM*STALHS
Trigger: GCTGTGCAGCGCCGTGGAGCACATGCATTCACGCCG...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGCCAAGAAGATGCTCCTaGTTCCCGATGCCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMPRRCS*FPMPFA
Trigger: GGCAAAAGGCATCGGGAAGCAGGAGCATCTTCTTGG...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACGATGGAATTACCTCATGAGGGCAGAAACTCGGCTGATGATGAGTTTCAAAGAATCACCTGCCCGATaGCAGCGCTGCTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: ERWNYLMRAETRLMMSFKESPAR*QRCSCL
Trigger: CAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTC...TTTGAAACTCATCATCAGCCGAGTTTCTGCCCTCATGAGGTAATTCCATCGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGCTGCCGGAAATGAGCTaGCTCCCAGCAAACTTCTCT +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVLPEMS*LPANFS
Trigger: AGAGAAGTTTGCTGGGAGGCAGCTCATTTCCGGCAG...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373600.7
ENST00000394199.6
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGATCCAGTGGCCTCCATaGAGGGAAAGCTTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVIQWPP*RESFQA
Trigger: GGCTTGAAAGCTTTCCCTGCATGGAGGCCACTGGAT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539416.5
CDS-3UTR CCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGGAAAAGACAGCGTGTTaGGATGCCTCTGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMEKTAC*DASVGQ
Trigger: CTGACCCACAGAGGCATCCCAACACGCTGTCTTTTC...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGGAAAAGACAGCGTGTTaGGATGCCTCTGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVEKTAC*DASVGQ
Trigger: CTGACCCACAGAGGCATCCCAACACGCTGTCTTTTC...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCTTGATGATATTTGGGTaGTTCAGTTGCTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSLMIFG*FSCFKR
Trigger: CCTCTTGAAGCAACTGAACCACCCAAATATCATCAA...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATACTTGATGATATTTaGGTGGTTCAGTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: SCFPMPFACDTLARCRALILDDI*VVQLLQ
Trigger: TTGAAGCAACTGAACCACCCAAATATCATCAAGTAT...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGATCTGCTTGGCCACCTaGTGCACGTATCCGATGTCA +
Preference number: 4 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGICLAT*CTYPMS
Trigger: TGACATCGGATACGTGCACCAGGTGGCCAAGCAGAT...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGAGATGTGCATCTGCTTaGCCACCTGGTGCACGTATC +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMRCASA*PPGARI
Trigger: GATACGTGCACCAGGTGGCCAAGCAGATGCACATCT...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGAGATGTGCATCTGCTTaGCCACCTGGTGCACGTATC +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVRCASA*PPGARI
Trigger: GATACGTGCACCAGGTGGCCAAGCAGATGCACATCT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGTTGCCTGTGACACTCTaGCCAGGTGCAGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTLPVTL*PGAGLS
Trigger: TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAA...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCGACAGCTCAGACAATTaGAAGGTTAACTTTACGTAC +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSDSSDN*KVNFTY
Trigger: GTACGTAAAGTTAACCTTCCAATTGTCTGAGCTGTC...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGGACAGCTCAGACAATTaGAAGGTTAACTTTACGTAC +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPDSSDN*KVNFTY
Trigger: GTACGTAAAGTTAACCTTCCAATTGTCTGAGCTGTC...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGCCTCCAGGAAAGGCCTaGTCAGTGAATGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTPPGKA*SVNACR
Trigger: CCTGCAGGCATTCACTGACCAGGCCTTTCCTGGAGG...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGAGGTTGATTGCGTGCTaGGGCTGGCAGTGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTRLIAC*GWQCWG
Trigger: TCCCCAACACTGCCAGCCCCAGCACGCAATCAACCT...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
3UTR CAA 72 bp CTTGAGGCTTCAGGTGACCATCGATACCTACCCTTTTaGCTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LEASGDHRYLPF*LAEFVWGGLRF
Trigger: AAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGCGGTGGTCTCAGAGCTaGAGAAGCGGCCCAGACCAA +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLRWSQS*RSGPDQ
Trigger: TTGGTCTGGGCCGCTTCTTCAGCTCTGAGACCACCG...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATACCAGATGTCGGACTTaGAGTTGTAGCCGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDTRCRT*SCSRSH
Trigger: ATGAGAACGGCTACAACTTCAAGTCCGACATCTGGT...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGGGCAGATGCACATGCTaGCCAGTTCTCGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVGRCTC*PVLVTS
Trigger: AGAAGTTACGAGAACTGGTCAGCATGTGCATCTGCC...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCCTGGTTTCCTACACATaGTACAGGTGTACATTAATT +
Preference number: 4 (lower is better)
Translates to: HSVESGWHAQSRLIACWGLVSYT*YRCTLI
Trigger: AATTAATGTACACCTGTATCATGTGTAGGAAACCAG...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCCTGGTTTCCTACACATaGTACAGGTGTACATTAATT +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSLVSYT*YRCTLI
Trigger: AATTAATGTACACCTGTATCATGTGTAGGAAACCAG...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGCTGGTTTCCTACACATaGTACAGGTGTACATTAATT +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPLVSYT*YRCTLI
Trigger: AATTAATGTACACCTGTATCATGTGTAGGAAACCAG...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp AGCTGGAAGCAGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGAACACTCAGGCCTGGTaGGTGGCTGAGATCGTGCGC +
Preference number: 4 (lower is better)
Translates to: SWKQNVGKKLVWNQKNLQNTQAW*VAEIVR
Trigger: GCGCACGATCTCAGCCACTCACCAGGCCTGAGTGTT...CTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGACCCTTTTTGCTGGCTaGATTTGTTTGGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGTLFAG*ICLGWP
Trigger: AGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGT...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGACCCTTTTTGCTGGCTaGATTTGTTTGGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVTLFAG*ICLGWP
Trigger: AGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp AGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGTGGTAAGCACTCCTGCCATCCTGCATaGCAGCCTCACGAGGGCACG +
Preference number: 4 (lower is better)
Translates to: RMLAKSWSGIRKIFSGKHSCHPA*QPHEGT
Trigger: CGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGA...GTGCTTACCACTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGTTTGGGTGGTTCAGTTaGTTCAAGAGGCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVFGWFS*FKRPIS
Trigger: GGAGATCGGCCTCTTGAAGCAACTGAACCACCCAAA...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGTTTGGGTGGTTCAGTTaGTTCAAGAGGCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMFGWFS*FKRPIS
Trigger: GGAGATCGGCCTCTTGAAGCAACTGAACCACCCAAA...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTCTGCGAGAGGTCCCCTaGGTCAGCCAACTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTLREVP*VSQLQH
Trigger: GTGCTGGAGTTGGCTGACGCAGGGGACCTCTCGCAG...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGAAGTACTTGATCATCTaGGAGAGGTCCCCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGKYLII*ERSPAS
Trigger: TGACGCAGGGGACCTCTCGCAGATGATCAAGTACTT...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGAAGTACTTGATCATCTaGGAGAGGTCCCCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVKYLII*ERSPAS
Trigger: TGACGCAGGGGACCTCTCGCAGATGATCAAGTACTT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGACGGCGCTGCACAGCTaGACAAAGTACTTCCATACT +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMTALHS*TKYFHT
Trigger: AGTATGGAAGTACTTTGTGCAGCTGTGCAGCGCCGT...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGTGTGCTCCACGGCGCTaGACAGCTGCACAAAGTACT +
Preference number: 4 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTCAPRR*TAAQST
Trigger: AGTACTTTGTGCAGCTGTGCAGCGCCGTGGAGCACA...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTCCAGATACAGGGGGCTaGCGTGGCTCGCTGAACCAC +
Preference number: 4 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTPDTGG*RGSLNH
Trigger: GTGGTTCAGCGAGCCACGGCAGCCCCCTGTATCTGG...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GAACGATGGAATTACCTCATGAGGGCAGAAACTCGGCTGATGATGAGTTTCAAAGCTCCTGCTTCCCGATaGCTTTTGCCTGTGACACTC +
Preference number: 4 (lower is better)
Translates to: ERWNYLMRAETRLMMSFKAPASR*LLPVTL
Trigger: GAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGAGC...TTTGAAACTCATCATCAGCCGAGTTTCTGCCCTCATGAGGTAATTCCATCGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGGTGTCAGGAATCACCTaGCCGATGCCAGCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLVSGIT*PMPALL
Trigger: GAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACAC...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGGGCCTGGTCAGTGAATaGCTGCAGGCAGCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLGLVSE*LQAAGV
Trigger: GACACCTGCTGCCTGCAGGCATTCACTGACCAGGCC...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACGATGGAATTACCTCATGAGGGCAGAAACTCGGCTGATGATGAGTTTCAAAAGTAGGTTGATTGCGTaGTGGGGCTGGCAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: ERWNYLMRAETRLMMSFKSRLIA*WGWQCW
Trigger: CCAACACTGCCAGCCCCAGCACGCAATCAACCTACT...TTTGAAACTCATCATCAGCCGAGTTTCTGCCCTCATGAGGTAATTCCATCGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGAAATGGGGTGATAAGTaGAGCACACCCTCCACCTCA +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVKWGDK*STPSTS
Trigger: TGAGGTGGAGGGTGTGCTGCACTTATCACCCCATTT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTACCTCCATGGGGCATGTaGCCGGGCTGTCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLPPWGM*PGCPAI
Trigger: GATGGCAGGACAGCCCGGCCACATGCCCCATGGAGG...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAATACTTGATGATATTTaGGTGGTTCAGTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: GCIWRDCRADGVTADPSPILDDI*VVQLLQ
Trigger: TTGAAGCAACTGAACCACCCAAATATCATCAAGTAT...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAGCAGCCGCCCGGCCCTaGGTGTTTCCTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLAAARP*VFPPGK
Trigger: CTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTGCAGCCGCCCGGCCCTaGGTGTTTCCTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLAAARP*VFPPGK
Trigger: CTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTCTGGCTGAATTTGTTTaGGGTGGCCTCAGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: HRYLPFLLAEFVWGGLRFLAEFV*GGLRFG
Trigger: ACCAAACCTGAGGCCACCCCAAACAAATTCAGCCAG...AAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGACGAGGGCACGAACCTaGGTCCCAGGCGAGCATCTA +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLTRART*VPGEHL
Trigger: TAGATGCTCGCCTGGGACCCAGGTTCGTGCCCTCGT...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539416.5
CDS-3UTR TCA 90 bp AGCTGGAAGCAGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGATGGATCCTCTCCGGTaGCATGTAGTAGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: SWKQNVGKKLVWNQKNLQMDPLR*HVVGRP
Trigger: GGGACGCCCTACTACATGTCACCGGAGAGGATCCAT...CTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGATGGATCCTCTCCGGTaGCATGTAGTAGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLMDPLR*HVVGRP
Trigger: GGGACGCCCTACTACATGTCACCGGAGAGGATCCAT...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGAAGGACTTTGGAATCTaGCCATCAGTGACATGTGGC +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMKDFGI*PSVTCG
Trigger: GCCACATGTCACTGATGGTCAGATTCCAAAGTCCTT...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGGACACTCTGGCCAGGTaGAGGGCTCTCATCGTCACT +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLDTLAR*RALIVT
Trigger: AGTGACGATGAGAGCCCTGCACCTGGCCAGAGTGTC...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACGATGGAATTACCTCATGAGGGCAGAAACTCGGCTGATGATGAGTTTCAAACCAAGAAGATGCTCCTaGTTCCCGATGCCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: ERWNYLMRAETRLMMSFKPRRCS*FPMPFA
Trigger: GGCAAAAGGCATCGGGAAGCAGGAGCATCTTCTTGG...TTTGAAACTCATCATCAGCCGAGTTTCTGCCCTCATGAGGTAATTCCATCGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGGAATCACCTGCCCGATaGCAGCGCTGCTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLESPAR*QRCSCL
Trigger: CAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTC...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AGCTGGAAGCAGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGGTTGGGATGCCTCTGTaGGTCAGGAGGATGCACAGG +
Preference number: 4 (lower is better)
Translates to: SWKQNVGKKLVWNQKNLQVGMPL*VRRMHR
Trigger: CCTGTGCATCCTCCTGACCCACAGAGGCATCCCAAC...CTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GAACGATGGAATTACCTCATGAGGGCAGAAACTCGGCTGATGATGAGTTTCAAAAGTCCTGCCTCGCCTTaGCGTCCATCATCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: ERWNYLMRAETRLMMSFKSPASP*RPSSQR
Trigger: TCTTTGAGATGATGGACGCCAAGGCGAGGCAGGACT...TTTGAAACTCATCATCAGCCGAGTTTCTGCCCTCATGAGGTAATTCCATCGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGAGTCCTGCCTCGCCTTaGCGTCCATCATCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTSPASP*RPSSQR
Trigger: TCTTTGAGATGATGGACGCCAAGGCGAGGCAGGACT...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CACAGTGTGGAAAGCGGGTGGCATGCACAAAGTAGGTTGATTGCGTGCTGGGGCATACTTGATGATATTTaGGTGGTTCAGTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: HSVESGWHAQSRLIACWGILDDI*VVQLLQ
Trigger: TTGAAGCAACTGAACCACCCAAATATCATCAAGTAT...GCCCCAGCACGCAATCAACCTACTTTGTGCATGCCACCCGCTTTCCACACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCATACTTGATGATATTTaGGTGGTTCAGTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSILDDI*VVQLLQ
Trigger: TTGAAGCAACTGAACCACCCAAATATCATCAAGTAT...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGATGTCAGGTCTCTGGTaGGGGTCAGGGCAGATGCAC +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLMSGLW*GSGQMH
Trigger: GTGCATCTGCCCTGACCCCCACCAGAGACCTGACAT...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GAACGATGGAATTACCTCATGAGGGCAGAAACTCGGCTGATGATGAGTTTCAAAATCTGCTTGGCCACCTaGTGCACGTATCCGATGTCA +
Preference number: 4 (lower is better)
Translates to: ERWNYLMRAETRLMMSFKICLAT*CTYPMS
Trigger: TGACATCGGATACGTGCACCAGGTGGCCAAGCAGAT...TTTGAAACTCATCATCAGCCGAGTTTCTGCCCTCATGAGGTAATTCCATCGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTACCATCAGTGACATGTaGCCAGCGCCCCTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTTISDM*PAPLPQ
Trigger: CTGAGGGAGGGGCGCTGGCCACATGTCACTGATGGT...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGGAAGATGGCCCAGCCTaGCTGCCAAGAAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLEDGPA*LPRRCS
Trigger: GGAGCATCTTCTTGGCAGCCAGGCTGGGCCATCTTC...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGAGGAAAGGCTGCATATaGAGAGACTGTCGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTRKGCI*RDCRAD
Trigger: GTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGATGTTGGCAAAAAGTTaGTCTGGAATCAGAAAAATC +
Preference number: 4 (lower is better)
Translates to: RKGCIWRDCRADGVTADPMLAKS*SGIRKI
Trigger: GATTTTTCTGATTCCAGACCAACTTTTTGCCAACAT...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAACTCAGGCCTGGTGAGTaGCTGAGATCGTGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFELRPGE*LRSCAS
Trigger: GGAGGCGCACGATCTCAGCCACTCACCAGGCCTGAG...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATACCTACCCTTTTTGCTaGCTGAATTTGTTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDTYPFC*LNLFGV
Trigger: CACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGT...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTAGAGGCCGATCTCCTTaGCACAGTCCTGCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLRGRSP*HSPASP
Trigger: AGGCGAGGCAGGACTGTGTCAAGGAGATCGGCCTCT...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTCGGTGGTCTCAGAGCTaGAGAAGCGGCCCAGACCAA +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLRWSQS*RSGPDQ
Trigger: TTGGTCTGGGCCGCTTCTTCAGCTCTGAGACCACCG...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTACGGTGGTCTCAGAGCTaGAGAAGCGGCCCAGACCAA +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLRWSQS*RSGPDQ
Trigger: TTGGTCTGGGCCGCTTCTTCAGCTCTGAGACCACCG...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGGGCAGATGCACATGCTaGCCAGTTCTCGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTGRCTC*PVLVTS
Trigger: AGAAGTTACGAGAACTGGTCAGCATGTGCATCTGCC...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAAGAAAGGCCTGGTCAGTaGATGCCTGCAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFEERPGQ*MPAGSR
Trigger: CCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTC...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAGAAAGGCCTGGTCAGTaGATGCCTGCAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLERPGQ*MPAGSR
Trigger: CCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTC...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAAAACACTCAGGCCTGGTaGGTGGCTGAGATCGTGCGC +
Preference number: 4 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFENTQAW*VAEIVR
Trigger: GCGCACGATCTCAGCCACTCACCAGGCCTGAGTGTT...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp AGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGTGGTAAGCACAGAACCAAGAGAAGGTaGGCAGGTGCACCGCCAGAG +
Preference number: 4 (lower is better)
Translates to: RMLAKSWSGIRKIFSGKHRTKRR*AGAPPE
Trigger: CTCTGGCGGTGCACCTGCTCACCTTCTCTTGGTTCT...GTGCTTACCACTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp AGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGTGGTAAGCACTCCTTGACACAGTCCTaGCTCGCCTTGGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: RMLAKSWSGIRKIFSGKHSLTQS*LALASI
Trigger: GATGGACGCCAAGGCGAGGCAGGACTGTGTCAAGGA...GTGCTTACCACTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAATCACCCGGCGTGAATaGATGTGCTCCACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLITRRE*MCSTAL
Trigger: CAGCGCCGTGGAGCACATGCATTCACGCCGGGTGAT...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTATCACCCGGCGTGAATaGATGTGCTCCACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLITRRE*MCSTAL
Trigger: CAGCGCCGTGGAGCACATGCATTCACGCCGGGTGAT...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGATCCAGATGTGCATCTaGTTGGCCACCTGGTGCACG +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLIQMCI*LATWCT
Trigger: CGTGCACCAGGTGGCCAAGCAGATGCACATCTGGAT...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGAATCACACGGTCTCCTaGAAGTCTCCTGTTAGCATA +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVNHTVS*KSPVSI
Trigger: TATGCTAACAGGAGACTTGCAGGAGACCGTGTGATT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAACCATCAGTGACATGTaGCCAGCGCCCCTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLTISDM*PAPLPQ
Trigger: CTGAGGGAGGGGCGCTGGCCACATGTCACTGATGGT...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGGCCTTGACAGGTCACTaGAGGAATTACCCTAAAGAT +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMALTGH*RNYPKD
Trigger: ATCTTTAGGGTAATTCCTCCAGTGACCTGTCAAGGC...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGTGTCAGAAGTCAGAGTaGACTCCCTTGAGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTCQKSE*TPLRLQ
Trigger: CTGAAGCCTCAAGGGAGTCCACTCTGACTTCTGACA...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTCAGTCAGCCAACCCTTaGACTCCTGTGCGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTQSANP*TPVRLR
Trigger: CCGAAGACGCACAGGAGTCCAAGGGTTGGCTGACTG...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373603.5
CDS-3UTR TCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAATGGATCCTCTCCGGTaGCATGTAGTAGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLMDPLR*HVVGRP
Trigger: GGGACGCCCTACTACATGTCACCGGAGAGGATCCAT...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGACCAGATGTCGGACTTaGAGTTGTAGCCGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTTRCRT*SCSRSH
Trigger: ATGAGAACGGCTACAACTTCAAGTCCGACATCTGGT...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAGATGCCTTTTGCCTGTaGCACTCTGGCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLDAFCL*HSGQVQ
Trigger: CTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATC...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGATCATCTCAAAGATCTaGACCTTCTTCAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVIISKI*TFFRAT
Trigger: AGTGGCTCTGAAGAAGGTGCAGATCTTTGAGATGAT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTATCCTTGACACAGTCCTaGCTCGCCTTGGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLSLTQS*LALASI
Trigger: GATGGACGCCAAGGCGAGGCAGGACTGTGTCAAGGA...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTGGCTTGATGTCTCGGTaGATCACCCGGCGTGAATGC +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLGLMSR*ITRREC
Trigger: GCATTCACGCCGGGTGATGCACCGAGACATCAAGCC...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTCTGGACATCCAGATGTaGATCTGCTTGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTLDIQM*ICLATW
Trigger: CCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAG...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTGCATCCACGCTCAGGTaGTGGACATCCAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTASTLR*WTSRCA
Trigger: TGCACATCTGGATGTCCAGCACCTGAGCGTGGATGC...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAGACACTCTGGCCAGGTaGAGGGCTCTCATCGTCACT +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLDTLAR*RALIVT
Trigger: AGTGACGATGAGAGCCCTGCACCTGGCCAGAGTGTC...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGTGGTAAGCACGCTCCTGCTTCCCGATaGCTTTTGCCTGTGACACTC +
Preference number: 4 (lower is better)
Translates to: RMLAKSWSGIRKIFSGKHAPASR*LLPVTL
Trigger: GAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGAGC...GTGCTTACCACTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTTGGCTGCCAAGAAGATaGTCCTGCTTCCCGATGCCT +
Preference number: 4 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTWLPRR*SCFPMP
Trigger: AGGCATCGGGAAGCAGGAGCATCTTCTTGGCAGCCA...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAAGAATCACCTGCCCGATaGCAGCGCTGCTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFEESPAR*QRCSCL
Trigger: CAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTC...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAGAATCACCTGCCCGATaGCAGCGCTGCTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLESPAR*QRCSCL
Trigger: CAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTC...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTGAATCACCTGCCCGATaGCAGCGCTGCTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLESPAR*QRCSCL
Trigger: CAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTC...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGGATACCTACCCTTTTTaGTGGCTGAATTTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVDTYPF*WLNLFG
Trigger: CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATC...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp CATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTGATACCTACCCTTTTTaGTGGCTGAATTTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: HRYLPFLLAEFVWGGLRFDTYPF*WLNLFG
Trigger: CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATC...AAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAGTTGGGATGCCTCTGTaGGTCAGGAGGATGCACAGG +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLVGMPL*VRRMHR
Trigger: CCTGTGCATCCTCCTGACCCACAGAGGCATCCCAAC...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTGTTGGGATGCCTCTGTaGGTCAGGAGGATGCACAGG +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLVGMPL*VRRMHR
Trigger: CCTGTGCATCCTCCTGACCCACAGAGGCATCCCAAC...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AGCTGGAAGCAGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGGAAAAGACAGCGTGTTaGGATGCCTCTGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SWKQNVGKKLVWNQKNLQEKTAC*DASVGQ
Trigger: CTGACCCACAGAGGCATCCCAACACGCTGTCTTTTC...CTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATTTGATGATATTTGGGTaGTTCAGTTGCTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDLMIFG*FSCFKR
Trigger: CCTCTTGAAGCAACTGAACCACCCAAATATCATCAA...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTATGTCAGGTCTCTGGTaGGGGTCAGGGCAGATGCAC +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLMSGLW*GSGQMH
Trigger: GTGCATCTGCCCTGACCCCCACCAGAGACCTGACAT...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGAGATGTGCATCTGCTTaGCCACCTGGTGCACGTATC +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLRCASA*PPGARI
Trigger: GATACGTGCACCAGGTGGCCAAGCAGATGCACATCT...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTATTGCCTGTGACACTCTaGCCAGGTGCAGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLLPVTL*PGAGLS
Trigger: TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAA...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTACCTCCAGGAAAGGCCTaGTCAGTGAATGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLPPGKA*SVNACR
Trigger: CCTGCAGGCATTCACTGACCAGGCCTTTCCTGGAGG...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGAGGAAAGGCTGCATATaGAGAGACTGTCGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLRKGCI*RDCRAD
Trigger: GTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTTTACTGAATGGGGCCTaGGAAGTTGTGTTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: HRYLPFLLAEFVWGGLRFLLNGA*EVVFFK
Trigger: CTTGAAAAACACAACTTCCCAGGCCCCATTCAGTAA...AAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTACCTTGTACACCTCGCTaGACTGTCCTCGGCCTATCT +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLPCTPR*TVLGLS
Trigger: AGATAGGCCGAGGACAGTTCAGCGAGGTGTACAAGG...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGGGCAGATGCACATGCTaGCCAGTTCTCGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLGRCTC*PVLVTS
Trigger: AGAAGTTACGAGAACTGGTCAGCATGTGCATCTGCC...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp AGCTGGAAGCAGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGAAATCCTGGGATTACTaGATGGGGCCTGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SWKQNVGKKLVWNQKNLQKSWDY*MGPGKL
Trigger: CAACTTCCCAGGCCCCATTCAGTAATCCCAGGATTT...CTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAAGAGAACATTCCAGGGTaGATCTGCTCTCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFEENIPG*ICSQAS
Trigger: GCTGGCCTGAGAGCAGATTCACCCTGGAATGTTCTC...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAGAGAACATTCCAGGGTaGATCTGCTCTCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLENIPG*ICSQAS
Trigger: GCTGGCCTGAGAGCAGATTCACCCTGGAATGTTCTC...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGGGGATGAGCCGCTTCTaGTTCTTAAAGTACTTGATC +
Preference number: 4 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTGMSRF*FLKYLI
Trigger: GATCAAGTACTTTAAGAAGCAGAAGCGGCTCATCCC...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTTGCTTGGCCACCTGGTaGACGTATCCGATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLCLATW*TYPMSG
Trigger: ACCTGACATCGGATACGTGCACCAGGTGGCCAAGCA...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAATCCAGATGTGCATCTaGTTGGCCACCTGGTGCACG +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLIQMCI*LATWCT
Trigger: CGTGCACCAGGTGGCCAAGCAGATGCACATCTGGAT...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTGCATCCACGCTCAGGTaGTGGACATCCAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLASTLR*WTSRCA
Trigger: TGCACATCTGGATGTCCAGCACCTGAGCGTGGATGC...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAGCATCCACGCTCAGGTaGTGGACATCCAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLASTLR*WTSRCA
Trigger: TGCACATCTGGATGTCCAGCACCTGAGCGTGGATGC...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGTGGTAAGCACTTTGATAAGGCACGGTaGATCCACGCTCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RMLAKSWSGIRKIFSGKHFDKAR*IHAQVL
Trigger: CAGCACCTGAGCGTGGATGCACCGTGCCTTATCAAA...GTGCTTACCACTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGGTCACGCTAGGAAGTTaGAGAACCAGAATTTGTAAA +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVVTLGS*RTRICK
Trigger: TTTACAAATTCTGGTTCTGCAACTTCCTAGCGTGAC...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATGTGGCAGAGGTTGTTaGAACTCCCTCCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFECGRGC*NSLHGA
Trigger: TGCCCCATGGAGGGAGTTCCAACAACCTCTGCCACA...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTATGTGGCAGAGGTTGTTaGAACTCCCTCCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLCGRGC*NSLHGA
Trigger: TGCCCCATGGAGGGAGTTCCAACAACCTCTGCCACA...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGTTGATGATATTTGGGTaGTTCAGTTGCTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: RTALRFSISHASFPWRKMLMIFG*FSCFKR
Trigger: CCTCTTGAAGCAACTGAACCACCCAAATATCATCAA...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTAGATGTGCATCTGCTTaGCCACCTGGTGCACGTATC +
Preference number: 4 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTRCASA*PPGARI
Trigger: GATACGTGCACCAGGTGGCCAAGCAGATGCACATCT...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GAACGATGGAATTACCTCATGAGGGCAGAAACTCGGCTGATGATGAGTTTCAAAGCCTTGACAGGTCACTaGAGGAATTACCCTAAAGAT +
Preference number: 4 (lower is better)
Translates to: ERWNYLMRAETRLMMSFKALTGH*RNYPKD
Trigger: ATCTTTAGGGTAATTCCTCCAGTGACCTGTCAAGGC...TTTGAAACTCATCATCAGCCGAGTTTCTGCCCTCATGAGGTAATTCCATCGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGTTTGTGAAGGGTGAGTaGCTACCATTTTTGGATCAT +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVFVKGE*LPFLDH
Trigger: ATGATCCAAAAATGGTAGCCACTCACCCTTCACAAA...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGAATTCTCGACTTCCGTaGTCCATGGACTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTNSRLP*SMDFSL
Trigger: CAAACTGAAGTCCATGGACCACGGAAGTCGAGAATT...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGAGTGTGGAAAGCGGGTaGCATGCACAAAGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLSVESG*HAQSRL
Trigger: CAACCTACTTTGTGCATGCCACCCGCTTTCCACACT...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp AGCTGGAAGCAGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGCTGGCTGAATTTGTTTaGGGTGGCCTCAGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: SWKQNVGKKLVWNQKNLQLAEFV*GGLRFG
Trigger: ACCAAACCTGAGGCCACCCCAAACAAATTCAGCCAG...CTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAAGGTCTGCTCCACTCTaGGTTGAGGGCAGACATGAG +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLRSAPL*VEGRHE
Trigger: CTCATGTCTGCCCTCAACCCAGAGTGGAGCAGACCT...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546191.5
CDS-3UTR TCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGACCAGATGTCGGACTTaGAGTTGTAGCCGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLTRCRT*SCSRSH
Trigger: ATGAGAACGGCTACAACTTCAAGTCCGACATCTGGT...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGATGGACTTCAGTTTGTaGAGGGTGAGTGGCTACCAT +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLMDFSL*RVSGYH
Trigger: ATGGTAGCCACTCACCCTTCACAAACTGAAGTCCAT...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTAAATCCTGGGATTACTaGATGGGGCCTGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTKSWDY*MGPGKL
Trigger: CAACTTCCCAGGCCCCATTCAGTAATCCCAGGATTT...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAACAGGCGACAGGGACTTaGTTGTTCTGTGGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFEQATGT*LFCGEN
Trigger: GTTCTCTCCACAGAACAATCAAGTCCCTGTCGCCTG...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GAACGATGGAATTACCTCATGAGGGCAGAAACTCGGCTGATGATGAGTTTCAAAGGTTTGGTTTGGTTTTaGAATGGGGTGATAAGTGCA +
Preference number: 4 (lower is better)
Translates to: ERWNYLMRAETRLMMSFKGLVWF*NGVISA
Trigger: TGCACTTATCACCCCATTTCAAAACCAAACCAAACC...TTTGAAACTCATCATCAGCCGAGTTTCTGCCCTCATGAGGTAATTCCATCGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTTTTGGGTGGTTCAGTTaGTTCAAGAGGCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTFGWFS*FKRPIS
Trigger: GGAGATCGGCCTCTTGAAGCAACTGAACCACCCAAA...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATTTGATAAGGCACGGTaGATCCACGCTCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFEFDKAR*IHAQVL
Trigger: CAGCACCTGAGCGTGGATGCACCGTGCCTTATCAAA...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTCCAAGAAGATGCTCCTaGTTCCCGATGCCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLPRRCS*FPMPFA
Trigger: GGCAAAAGGCATCGGGAAGCAGGAGCATCTTCTTGG...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAAGTCCTGCCTCGCCTTaGCGTCCATCATCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLSPASP*RPSSQR
Trigger: TCTTTGAGATGATGGACGCCAAGGCGAGGCAGGACT...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTATCCACGCTCAGGTGCTaGACATCCAGATGTGCATCT +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLSTLRC*TSRCAS
Trigger: AGATGCACATCTGGATGTCCAGCACCTGAGCGTGGA...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGCATGCTTCCTTCCCATaGAGGAAAATGCTTAACACT +
Preference number: 4 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTHASFP*RKMLNT
Trigger: AGTGTTAAGCATTTTCCTCCATGGGAAGGAAGCATG...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTGGCTGGGGAGAACGATaGAATTACCTCATGAGGGCA +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLGWGER*NYLMRA
Trigger: TGCCCTCATGAGGTAATTCCATCGTTCTCCCCAGCC...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTGGCAGATGCACATGCTaGCCAGTTCTCGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLGRCTC*PVLVTS
Trigger: AGAAGTTACGAGAACTGGTCAGCATGTGCATCTGCC...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAGGCAGATGCACATGCTaGCCAGTTCTCGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLGRCTC*PVLVTS
Trigger: AGAAGTTACGAGAACTGGTCAGCATGTGCATCTGCC...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR TCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAACCCTTTTTGCTGGCTaGATTTGTTTGGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLTLFAG*ICLGWP
Trigger: AGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGT...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTTTTGGGTGGTTCAGTTaGTTCAAGAGGCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLFGWFS*FKRPIS
Trigger: GGAGATCGGCCTCTTGAAGCAACTGAACCACCCAAA...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTATTTGGGTGGTTCAGTTaGTTCAAGAGGCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLFGWFS*FKRPIS
Trigger: GGAGATCGGCCTCTTGAAGCAACTGAACCACCCAAA...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGGGGATGAGCCGCTTCTaGTTCTTAAAGTACTTGATC +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLGMSRF*FLKYLI
Trigger: GATCAAGTACTTTAAGAAGCAGAAGCGGCTCATCCC...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAACGGCGCTGCACAGCTaGACAAAGTACTTCCATACT +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLTALHS*TKYFHT
Trigger: AGTATGGAAGTACTTTGTGCAGCTGTGCAGCGCCGT...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AGCTGGAAGCAGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGAATCACACGGTCTCCTaGAAGTCTCCTGTTAGCATA +
Preference number: 4 (lower is better)
Translates to: SWKQNVGKKLVWNQKNLQNHTVS*KSPVSI
Trigger: TATGCTAACAGGAGACTTGCAGGAGACCGTGTGATT...CTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGAATCACACGGTCTCCTaGAAGTCTCCTGTTAGCATA +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLNHTVS*KSPVSI
Trigger: TATGCTAACAGGAGACTTGCAGGAGACCGTGTGATT...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR GCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAAAATGGGGTGATAAGTaGAGCACACCCTCCACCTCA +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLKWGDK*STPSTS
Trigger: TGAGGTGGAGGGTGTGCTGCACTTATCACCCCATTT...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGTTGATGATATTTGGGTaGTTCAGTTGCTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTLMIFG*FSCFKR
Trigger: CCTCTTGAAGCAACTGAACCACCCAAATATCATCAA...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGATACTTGATGATATTTaGGTGGTTCAGTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: GGITLKIHITIQIQGAAVILDDI*VVQLLQ
Trigger: TTGAAGCAACTGAACCACCCAAATATCATCAAGTAT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGAATTCTCGACTTCCGTaGTCCATGGACTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLNSRLP*SMDFSL
Trigger: CAAACTGAAGTCCATGGACCACGGAAGTCGAGAATT...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp CATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTATGTTGGCAAAAAGTTaGTCTGGAATCAGAAAAATC +
Preference number: 4 (lower is better)
Translates to: HRYLPFLLAEFVWGGLRFMLAKS*SGIRKI
Trigger: GATTTTTCTGATTCCAGACCAACTTTTTGCCAACAT...AAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTATCCAGAGGGTCCAGTTaGGCAGATTGTTCTCACAGT +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLSRGSS*ADCSHS
Trigger: ACTGTGAGAACAATCTGCCCAACTGGACCCTCTGGA...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAAAAGGACTTTGGAATCTaGCCATCAGTGACATGTGGC +
Preference number: 4 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFEKDFGI*PSVTCG
Trigger: GCCACATGTCACTGATGGTCAGATTCCAAAGTCCTT...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTGGGATGAGCCGCTTCTaGTTCTTAAAGTACTTGATC +
Preference number: 4 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTGMSRF*FLKYLI
Trigger: GATCAAGTACTTTAAGAAGCAGAAGCGGCTCATCCC...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGCATGCTTCCTTCCCATaGAGGAAAATGCTTAACACT +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLHASFP*RKMLNT
Trigger: AGTGTTAAGCATTTTCCTCCATGGGAAGGAAGCATG...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTAAGCTTTCAAGCCCGTaGCCTCCCCTAATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLKLSSP*PPLIFS
Trigger: AGAGAAAATTAGGGGAGGCCACGGGCTTGAAAGCTT...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539416.5
CDS-3UTR TCA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTGGTTTGGTTTGGTTTTaGAATGGGGTGATAAGTGCA +
Preference number: 4 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTGLVWF*NGVISA
Trigger: TGCACTTATCACCCCATTTCAAAACCAAACCAAACC...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGTTTGTGAAGGGTGAGTaGCTACCATTTTTGGATCAT +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLFVKGE*LPFLDH
Trigger: ATGATCCAAAAATGGTAGCCACTCACCCTTCACAAA...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTAATTCTCGACTTCCGTaGTCCATGGACTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLNSRLP*SMDFSL
Trigger: CAAACTGAAGTCCATGGACCACGGAAGTCGAGAATT...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGGACAGCTCAGACAATTaGAAGGTTAACTTTACGTAC +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLDSSDN*KVNFTY
Trigger: GTACGTAAAGTTAACCTTCCAATTGTCTGAGCTGTC...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAAGACTTGATTGTTCTGTaGAGAGAACATTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFEDLIVL*REHSRV
Trigger: CACCCTGGAATGTTCTCTCCACAGAACAATCAAGTC...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTCTGGAAGCAGAATGTTaGCAAAAAGTTGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTLEAEC*QKVGLE
Trigger: TTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAG...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR TCA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAAGGTTTGGTTTGGTTTTaGAATGGGGTGATAAGTGCA +
Preference number: 4 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFEGLVWF*NGVISA
Trigger: TGCACTTATCACCCCATTTCAAAACCAAACCAAACC...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR GCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAATCATCTCAAAGATCTaGACCTTCTTCAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLIISKI*TFFRAT
Trigger: AGTGGCTCTGAAGAAGGTGCAGATCTTTGAGATGAT...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTCATGCTTCCTTCCCATaGAGGAAAATGCTTAACACT +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLHASFP*RKMLNT
Trigger: AGTGTTAAGCATTTTCCTCCATGGGAAGGAAGCATG...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTTTACTGAATGGGGCCTaGGAAGTTGTGTTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLLLNGA*EVVFFK
Trigger: CTTGAAAAACACAACTTCCCAGGCCCCATTCAGTAA...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATTACTGAATGGGGCCTaGGAAGTTGTGTTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFELLNGA*EVVFFK
Trigger: CTTGAAAAACACAACTTCCCAGGCCCCATTCAGTAA...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAACTGGAAGCAGAATGTTaGCAAAAAGTTGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFELEAEC*QKVGLE
Trigger: TTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAG...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTCTGGAAGCAGAATGTTaGCAAAAAGTTGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLLEAEC*QKVGLE
Trigger: TTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAG...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CCA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTTTGATGATATTTGGGTaGTTCAGTTGCTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: EHISGFLHMIQVYINSRLLMIFG*FSCFKR
Trigger: CCTCTTGAAGCAACTGAACCACCCAAATATCATCAA...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGATACTTGATGATATTTaGGTGGTTCAGTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLILDDI*VVQLLQ
Trigger: TTGAAGCAACTGAACCACCCAAATATCATCAAGTAT...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAGACAGCTCAGACAATTaGAAGGTTAACTTTACGTAC +
Preference number: 4 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLDSSDN*KVNFTY
Trigger: GTACGTAAAGTTAACCTTCCAATTGTCTGAGCTGTC...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CCA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGATGTTGGCAAAAAGTTaGTCTGGAATCAGAAAAATC +
Preference number: 4 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLMLAKS*SGIRKI
Trigger: GATTTTTCTGATTCCAGACCAACTTTTTGCCAACAT...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS CCA 90 bp GGCTCGGCTGCCGCTGGGGGACCGGTGCGCTGGCCCGCGGGCGGCTaGAGCGGTGCGTCCCACACGAGTTTGCGGCGCAGCGGCCGCACG +
Preference number: 5 (lower is better)
Translates to: GSAAAGGPVRWPAGG*SGASHTSLRRSGRT
Trigger: CGTGCGGCCGCTGCGCCGCAAACTCGTGTGGGACGCACCGCTCCAGCCGCCCGCGGGCCAGCGCACCGGTCCCCCAGCGGCAGCCGAGCC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320246.10
ENST00000373600.7
CDS GCA 90 bp TGCGCTGGCCCGCGGGCGGCTGGAGCGGTGCGTCCCACACGAGTTTaGGGCGCAGCGGCCGCACGCCCGTCAGCTCGGTTCCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: CAGPRAAGAVRPTRV*GAAAARPSARFRRR
Trigger: GCGGCGGCGGAACCGAGCTGACGGGCGTGCGGCCGCTGCGCCGCAAACTCGTGTGGGACGCACCGCTCCAGCCGCCCGCGGGCCAGCGCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320246.10
CDS GCA 90 bp TGCCGCTGGGGGACCGGTGCGCTGGCCCGCGGGCGGCTGGAGCGGTaGGTCCCACACGAGTTTGCGGCGCAGCGGCCGCACGCCCGTCAG +
Preference number: 5 (lower is better)
Translates to: CRWGTGALARGRLER*VPHEFAAQRPHARQ
Trigger: CTGACGGGCGTGCGGCCGCTGCGCCGCAAACTCGTGTGGGACGCACCGCTCCAGCCGCCCGCGGGCCAGCGCACCGGTCCCCCAGCGGCA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320246.10
ENST00000373600.7
CDS GCA 90 bp TGGAACTCCCTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCCTaGATGCCAGCCTCACGAGGGCACGAACGGCGCGCGGGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: WNSLHGACGRAVLPS*MPASRGHERRAGGL
Trigger: GAGCCCGCCCGCGCGCCGTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAGGGAGTTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320246.10
CDS GCA 90 bp TGGAACTCCCTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCCTaGATGCCAGCCTCACGAGGGCACGAAAGGGCGCAGGCCGGCGTC +
Preference number: 5 (lower is better)
Translates to: WNSLHGACGRAVLPS*MPASRGHERAQAGV
Trigger: GACGCCGGCCTGCGCCCTTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAGGGAGTTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373603.5
ENST00000540326.5
CDS GCA 90 bp TGGAACTCCCTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCCTaGATGCCAGCCTCACGAGGGCACGAACCTGGGTCCCAGGCGAGC +
Preference number: 5 (lower is better)
Translates to: WNSLHGACGRAVLPS*MPASRGHEPGSQAS
Trigger: GCTCGCCTGGGACCCAGGTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAGGGAGTTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539416.5
CDS GCA 90 bp TGGAACTCCCTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCCTaGATGCCAGCCTCACGAGGGCACGAACTCGAGGCCTTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: WNSLHGACGRAVLPS*MPASRGHELEALAG
Trigger: GCCTGCCAAGGCCTCGAGTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAGGGAGTTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373600.7
ENST00000394199.6
ENST00000423785.5
CDS GCA 90 bp TGGAACTCCCTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCCTaGATGCCAGCCTCACGAGGGCACGAACCGCTGAGCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: WNSLHGACGRAVLPS*MPASRGHEPLSLAS
Trigger: GGAGGCCAAGCTCAGCGGTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAGGGAGTTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447379.1
CDS GCA 90 bp TCCAGGGAAGGTCTGCTCCACTCTGGGTTGAGGGCAGACATGAGGTaGCTGGGCCTCCAGGGAGCTGGGTCGCCTCTCTGGGCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: SREGLLHSGLRADMR*LGLQGAGSPLWAGV
Trigger: CACCCCAGCCCAGAGAGGCGACCCAGCTCCCTGGAGGCCCAGGCACCTCATGTCTGCCCTCAACCCAGAGTGGAGCAGACCTTCCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546191.5
CDS-3UTR CAA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAGCGTCCCACACGAGTTaGCGGCGCAGCGGCCGCACG +
Preference number: 5 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSASHTS*RRSGRT
Trigger: CGTGCGGCCGCTGCGCCGCAAACTCGTGTGGGACGC...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320246.10
ENST00000373600.7
CDS TCA 90 bp AGTAGGGCGTCCCCACTAGGGAGTGGGCTGCGGTGGTCTCAGAGCTaGAGAAGCGGCCCAGACCAAGGTCACCGAGCTTCACGACGCCCG +
Preference number: 5 (lower is better)
Translates to: SRASPLGSGLRWSQS*RSGPDQGHRASRRP
Trigger: CGGGCGTCGTGAAGCTCGGTGACCTTGGTCTGGGCCGCTTCTTCAGCTCTGAGACCACCGCAGCCCACTCCCTAGTGGGGACGCCCTACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000425237.5
ENST00000444973.5
ENST00000454453.5
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CCA 90 bp CCCAGGGTGTGGCAGAGGTTGTTGGAACTCCCTCCATGGGGCATGTaGCCGGGCTGTCCTGCCATCCTGCATGCCAGCCTCACGAGGGCA +
Preference number: 5 (lower is better)
Translates to: PRVWQRLLELPPWGM*PGCPAILHASLTRA
Trigger: TGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAGGGAGTTCCAACAACCTCTGCCACACCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000454453.5
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CCA 90 bp GTGGGTCAGGAGGATGCACAGGCCCCAGGGTGTGGCAGAGGTTGTTaGAACTCCCTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: VGQEDAQAPGCGRGC*NSLHGACGRAVLPS
Trigger: GGATGGCAGGACAGCCCGGCCACATGCCCCATGGAGGGAGTTCCAACAACCTCTGCCACACCCTGGGGCCTGTGCATCCTCCTGACCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000454453.5
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCCACGAACTCGAGGCCTaGGCAGGCTCTGCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAHELEA*AGSAPP
Trigger: AGGAGGAGCAGAGCCTGCCAAGGCCTCGAGTTCGTG...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373600.7
ENST00000394199.6
CDS GCA 90 bp TGGAACTCCCTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCCTaGATGCCAGCCTCACGAGGGCACGAACCCAACAACGCCACCAGA +
Preference number: 5 (lower is better)
Translates to: WNSLHGACGRAVLPS*MPASRGHEPNNATR
Trigger: TCTGGTGGCGTTGTTGGGTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAGGGAGTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000444973.5
ENST00000454453.5
ENST00000545174.5
CDS CCA 90 bp TGCCATCCTGCATGCCAGCCTCACGAGGGCACGAACTCGAGGCCTTaGCAGGCTCTGCTCCTCCTGCCGGAAATGAGCTGCCTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: CHPACQPHEGTNSRP*QALLLLPEMSCLPA
Trigger: TGCTGGGAGGCAGCTCATTTCCGGCAGGAGGAGCAGAGCCTGCCAAGGCCTCGAGTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373600.7
ENST00000394199.6
ENST00000423785.5
CDS-3UTR CAA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCGTGTGGCAGAGGTTGTaGGAACTCCCTCCATGGGGC +
Preference number: 5 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAVWQRL*ELPPWG
Trigger: GCCCCATGGAGGGAGTTCCAACAACCTCTGCCACAC...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS GCA 90 bp TGGAACTCCCTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCCTaGATGCCAGCCTCACGAGGGCACGAAAAGCGATCTCGCTGTCAG +
Preference number: 5 (lower is better)
Translates to: WNSLHGACGRAVLPS*MPASRGHEKRSRCQ
Trigger: CTGACAGCGAGATCGCTTTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAGGGAGTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373596.5
CDS GCA 90 bp TGGAACTCCCTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCCTaGATGCCAGCCTCACGAGGGCACGAACTACAAGCGATCTCGCTG +
Preference number: 5 (lower is better)
Translates to: WNSLHGACGRAVLPS*MPASRGHELQAISL
Trigger: CAGCGAGATCGCTTGTAGTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAGGGAGTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425237.5
CDS-3UTR CAA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCAGCAGGCAGGTGGCCTaGTACACCTCGCTGAACTGT +
Preference number: 5 (lower is better)
Translates to: AARPWVFPPGKAWSVNACSRQVA*YTSLNC
Trigger: ACAGTTCAGCGAGGTGTACAAGGCCACCTGCCTGCT...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS TCA 90 bp GCACGAACTCGAGGCCTTGGCAGGCTCTGCTCCTCCTGCCGGAAATaGGCTGCCTCCCAGCAAACTTCTCTCCTGGGCATCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ARTRGLGRLCSSCRK*AASQQTSLLGISSR
Trigger: CCTGGAGGAGATGCCCAGGAGAGAAGTTTGCTGGGAGGCAGCTCATTTCCGGCAGGAGGAGCAGAGCCTGCCAAGGCCTCGAGTTCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373600.7
ENST00000423785.5
CDS GCA 90 bp AACTCGAGGCCTTGGCAGGCTCTGCTCCTCCTGCCGGAAATGAGCTaGCTCCCAGCAAACTTCTCTCCTGGGCATCTCCTCCAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: NSRPWQALLLLPEMS*LPANFSPGHLLQAA
Trigger: GGCTGCCTGGAGGAGATGCCCAGGAGAGAAGTTTGCTGGGAGGCAGCTCATTTCCGGCAGGAGGAGCAGAGCCTGCCAAGGCCTCGAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373600.7
ENST00000423785.5
CDS GCA 90 bp TGGAACTCCCTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCCTaGATGCCAGCCTCACGAGGGCACGAACTTTTGAAGTGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: WNSLHGACGRAVLPS*MPASRGHELLKWLL
Trigger: CAGGAGCCACTTCAAAAGTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAGGGAGTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422297.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGGTGTGGCAGAGGTTGTaGGAACTCCCTCCATGGGGC +
Preference number: 5 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLVWQRL*ELPPWG
Trigger: GCCCCATGGAGGGAGTTCCAACAACCTCTGCCACAC...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGGTGTGGCAGAGGTTGTaGGAACTCCCTCCATGGGGC +
Preference number: 5 (lower is better)
Translates to: AAGVRNHLPDASAALVWRVWQRL*ELPPWG
Trigger: GCCCCATGGAGGGAGTTCCAACAACCTCTGCCACAC...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCAACACGTTGGCAGGCTaGATGTCTCGGTGCATCACC +
Preference number: 5 (lower is better)
Translates to: AARPWVFPPGKAWSVNACNTLAG*MSRCIT
Trigger: GGTGATGCACCGAGACATCAAGCCTGCCAACGTGTT...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCAGGCTGGGCAGCCTTTaGGGGAACCTGCTGAACCCT +
Preference number: 5 (lower is better)
Translates to: QGESALRPAPVLQLPGAGRLGSL*GNLLNP
Trigger: AGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCT...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCCATGCACAAAGTAGGTaGATTGCGTGCTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAHAQSR*IACWGW
Trigger: CCAGCCCCAGCACGCAATCAACCTACTTTGTGCATG...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGGCAGTCAGCCAACCCTaGGACTCCTGTGCGTCTTCG +
Preference number: 5 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLAVSQP*DSCASS
Trigger: CGAAGACGCACAGGAGTCCAAGGGTTGGCTGACTGC...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373603.5
ENST00000540326.5
CDS-3UTR CAA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGCTGCTCCACTCTGGGTaGAGGGCAGACATGAGGTGC +
Preference number: 5 (lower is better)
Translates to: AAGVRNHLPDASAALVWRLLHSG*RADMRC
Trigger: GCACCTCATGTCTGCCCTCAACCCAGAGTGGAGCAG...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546191.5
CDS CCA 90 bp CACGCTCAGGTGCTGGACATCCAGATGTGCATCTGCTTGGCCACCTaGTGCACGTATCCGATGTCAGGTCTCTGGTGGGGGTCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: HAQVLDIQMCICLAT*CTYPMSGLWWGSGQ
Trigger: CTGCCCTGACCCCCACCAGAGACCTGACATCGGATACGTGCACCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAGCACCTGAGCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CCA 90 bp TTTGAAGTGGCTCCTGAGAAGCTCCAGGGAAGGTCTGCTCCACTCTaGGTTGAGGGCAGACATGAGGTGCCTGGGCCTCCAGGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: FEVAPEKLQGRSAPL*VEGRHEVPGPPGSW
Trigger: CCAGCTCCCTGGAGGCCCAGGCACCTCATGTCTGCCCTCAACCCAGAGTGGAGCAGACCTTCCCTGGAGCTTCTCAGGAGCCACTTCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422297.5
ENST00000546191.5
CDS-3UTR CAA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATAGCAGGCAGGTGGCCTaGTACACCTCGCTGAACTGT +
Preference number: 5 (lower is better)
Translates to: RPGEWLRSCASRGSSWADSRQVA*YTSLNC
Trigger: ACAGTTCAGCGAGGTGTACAAGGCCACCTGCCTGCT...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAAGAGGCCGATCTCCTaGACACAGTCCTGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: SCFPMPFACDTLARCRALKRPIS*TQSCLA
Trigger: GGCGAGGCAGGACTGTGTCAAGGAGATCGGCCTCTT...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCAAAGTGGTGCTGGCTTaGATAAGGCACGGTGCATCC +
Preference number: 5 (lower is better)
Translates to: AARPWVFPPGKAWSVNACKVVLA*IRHGAS
Trigger: GGATGCACCGTGCCTTATCAAAGCCAGCACCACTTT...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCAAAGTGGTGCTGGCTTaGATAAGGCACGGTGCATCC +
Preference number: 5 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAKVVLA*IRHGAS
Trigger: GGATGCACCGTGCCTTATCAAAGCCAGCACCACTTT...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCAACCACCTGCCCTTATaGACCCAGCTGAGATTGTCC +
Preference number: 5 (lower is better)
Translates to: AARPWVFPPGKAWSVNACNHLPL*TQLRLS
Trigger: GGACAATCTCAGCTGGGTCAATAAGGGCAGGTGGTT...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGGCTTCCCGATGCCTTTaGCCTGTGACACTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLASRCL*PVTLWP
Trigger: TGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGC...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCGCAGGCGACAGGGACTaGATTGTTCTGTGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAAGDRD*IVLWRE
Trigger: TTCTCTCCACAGAACAATCAAGTCCCTGTCGCCTGC...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS GCA 90 bp GCTCAGGTGCTGGACATCCAGATGTGCATCTGCTTGGCCACCTGGTaGACGTATCCGATGTCAGGTCTCTGGTGGGGGTCAGGGCAGATG +
Preference number: 5 (lower is better)
Translates to: AQVLDIQMCICLATW*TYPMSGLWWGSGQM
Trigger: CATCTGCCCTGACCCCCACCAGAGACCTGACATCGGATACGTGCACCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAGCACCTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS GCA 90 bp GCACGGTGCATCCACGCTCAGGTGCTGGACATCCAGATGTGCATCTaGTTGGCCACCTGGTGCACGTATCCGATGTCAGGTCTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: ARCIHAQVLDIQMCI*LATWCTYPMSGLWW
Trigger: CCACCAGAGACCTGACATCGGATACGTGCACCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAGCACCTGAGCGTGGATGCACCGTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CCA 90 bp GGTGCATCCACGCTCAGGTGCTGGACATCCAGATGTGCATCTGCTTaGCCACCTGGTGCACGTATCCGATGTCAGGTCTCTGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: GASTLRCWTSRCASA*PPGARIRCQVSGGG
Trigger: ACCCCCACCAGAGACCTGACATCGGATACGTGCACCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAGCACCTGAGCGTGGATGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGCGAAAAGACAGCGTGTaGGGATGCCTCTGTGGGTCA +
Preference number: 5 (lower is better)
Translates to: AAGVRNHLPDASAALVWRRKDSV*GCLCGS
Trigger: TGACCCACAGAGGCATCCCAACACGCTGTCTTTTCG...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCAAGAGGCCGATCTCCTaGACACAGTCCTGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: GKAWSVNACRQQVSGITCKRPIS*TQSCLA
Trigger: GGCGAGGCAGGACTGTGTCAAGGAGATCGGCCTCTT...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GCAGCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCATTTGGGTGGTTCAGTaGCTTCAAGAGGCCGATCTC +
Preference number: 5 (lower is better)
Translates to: AAARPWVFPPGKAWSVNAIWVVQ*LQEADL
Trigger: GAGATCGGCCTCTTGAAGCAACTGAACCACCCAAAT...GGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp CAGGGTGAATCTGCTCTCAGGCCAGCTCCTGTGTTACAGCTGCCAGGGGCAGGCAACACGTTGGCAGGCTaGATGTCTCGGTGCATCACC +
Preference number: 5 (lower is better)
Translates to: QGESALRPAPVLQLPGAGNTLAG*MSRCIT
Trigger: GGTGATGCACCGAGACATCAAGCCTGCCAACGTGTT...GCCTGCCCCTGGCAGCTGTAACACAGGAGCTGGCCTGAGAGCAGATTCACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATGCTGTGATGAACACGTaGGCAGGCTTGATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: RPGEWLRSCASRGSSWADAVMNT*AGLMSR
Trigger: CCGAGACATCAAGCCTGCCAACGTGTTCATCACAGC...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATCAGATGTGCATCTGCTaGGCCACCTGGTGCACGTAT +
Preference number: 5 (lower is better)
Translates to: RPGEWLRSCASRGSSWADQMCIC*ATWCTY
Trigger: ATACGTGCACCAGGTGGCCAAGCAGATGCACATCTG...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCAGGCTGGGCAGCCTTTaGGGGAACCTGCTGAACCCT +
Preference number: 5 (lower is better)
Translates to: GKAWSVNACRQQVSGITCRLGSL*GNLLNP
Trigger: AGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCT...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCAGGCTGGGCAGCCTTTaGGGGAACCTGCTGAACCCT +
Preference number: 5 (lower is better)
Translates to: CFPMPFACDTLARCRALIRLGSL*GNLLNP
Trigger: AGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCT...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGCTCCAGAGGGTCCAGTaGGGCAGATTGTTCTCACAG +
Preference number: 5 (lower is better)
Translates to: AAGVRNHLPDASAALVWRLQRVQ*GRLFSQ
Trigger: CTGTGAGAACAATCTGCCCAACTGGACCCTCTGGAG...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCTTTTGCTGGCTGAATTaGTTTGGGGTGGCCTCAGGT +
Preference number: 5 (lower is better)
Translates to: AARPWVFPPGKAWSVNACFCWLN*FGVASG
Trigger: ACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAA...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS GCA 90 bp CGGCGTCTCCCCATCTTCTCCGGCTCTAGACTTATGATGAGGGTCTaGAGTCAGCCAACCCTTGGACTCCTGTGCGTCTTCGGATTCCCC +
Preference number: 5 (lower is better)
Translates to: RRLPIFSGSRLMMRV*SQPTLGLLCVFGFP
Trigger: GGGGAATCCGAAGACGCACAGGAGTCCAAGGGTTGGCTGACTGCAGACCCTCATCATAAGTCTAGAGCCGGAGAAGATGGGGAGACGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373603.5
ENST00000540326.5
CDS-3UTR CAA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCCGAAAAGACAGCGTGTaGGGATGCCTCTGTGGGTCA +
Preference number: 5 (lower is better)
Translates to: SCFPMPFACDTLARCRALRKDSV*GCLCGS
Trigger: TGACCCACAGAGGCATCCCAACACGCTGTCTTTTCG...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAAGCAGGCAGGTGGCCTaGTACACCTCGCTGAACTGT +
Preference number: 5 (lower is better)
Translates to: GCIWRDCRADGVTADPSPSRQVA*YTSLNC
Trigger: ACAGTTCAGCGAGGTGTACAAGGCCACCTGCCTGCT...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCAGCAGGCAGGTGGCCTaGTACACCTCGCTGAACTGT +
Preference number: 5 (lower is better)
Translates to: GKAWSVNACRQQVSGITCSRQVA*YTSLNC
Trigger: ACAGTTCAGCGAGGTGTACAAGGCCACCTGCCTGCT...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAAGAGGCCGATCTCCTaGACACAGTCCTGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: RKGCIWRDCRADGVTADPKRPIS*TQSCLA
Trigger: GGCGAGGCAGGACTGTGTCAAGGAGATCGGCCTCTT...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCAAGAGGCCGATCTCCTaGACACAGTCCTGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSKRPIS*TQSCLA
Trigger: GGCGAGGCAGGACTGTGTCAAGGAGATCGGCCTCTT...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAAACACGTTGGCAGGCTaGATGTCTCGGTGCATCACC +
Preference number: 5 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSNTLAG*MSRCIT
Trigger: GGTGATGCACCGAGACATCAAGCCTGCCAACGTGTT...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCGCTGTGATGAACACGTaGGCAGGCTTGATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: SCFPMPFACDTLARCRALAVMNT*AGLMSR
Trigger: CCGAGACATCAAGCCTGCCAACGTGTTCATCACAGC...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCCAGATGTGCATCTGCTaGGCCACCTGGTGCACGTAT +
Preference number: 5 (lower is better)
Translates to: SCFPMPFACDTLARCRALQMCIC*ATWCTY
Trigger: ATACGTGCACCAGGTGGCCAAGCAGATGCACATCTG...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCACAGATGTGCATCTGCTaGGCCACCTGGTGCACGTAT +
Preference number: 5 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSQMCIC*ATWCTY
Trigger: ATACGTGCACCAGGTGGCCAAGCAGATGCACATCTG...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGAAAGTGGTGCTGGCTTaGATAAGGCACGGTGCATCC +
Preference number: 5 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLKVVLA*IRHGAS
Trigger: GGATGCACCGTGCCTTATCAAAGCCAGCACCACTTT...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGCTTCCCGATGCCTTTaGCCTGTGACACTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: GCIWRDCRADGVTADPSPASRCL*PVTLWP
Trigger: TGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCACTCCAGAGGGTCCAGTaGGGCAGATTGTTCTCACAG +
Preference number: 5 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSLQRVQ*GRLFSQ
Trigger: CTGTGAGAACAATCTGCCCAACTGGACCCTCTGGAG...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCGCAGTCAGCCAACCCTaGGACTCCTGTGCGTCTTCG +
Preference number: 5 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSAVSQP*DSCASS
Trigger: CGAAGACGCACAGGAGTCCAAGGGTTGGCTGACTGC...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373603.5
ENST00000540326.5
CDS GCA 90 bp GATAAGGCACGGTGCATCCACGCTCAGGTGCTGGACATCCAGATGTaGATCTGCTTGGCCACCTGGTGCACGTATCCGATGTCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: DKARCIHAQVLDIQM*ICLATWCTYPMSGL
Trigger: GAGACCTGACATCGGATACGTGCACCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAGCACCTGAGCGTGGATGCACCGTGCCTTATC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CCA 90 bp TGCATCTGCTTGGCCACCTGGTGCACGTATCCGATGTCAGGTCTCTaGTGGGGGTCAGGGCAGATGCACATGCTGACCAGTTCTCGTAAC +
Preference number: 5 (lower is better)
Translates to: CICLATWCTYPMSGL*WGSGQMHMLTSSRN
Trigger: GTTACGAGAACTGGTCAGCATGTGCATCTGCCCTGACCCCCACCAGAGACCTGACATCGGATACGTGCACCAGGTGGCCAAGCAGATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CCA 90 bp GTGGTGCTGGCTTTGATAAGGCACGGTGCATCCACGCTCAGGTGCTaGACATCCAGATGTGCATCTGCTTGGCCACCTGGTGCACGTATC +
Preference number: 5 (lower is better)
Translates to: VVLALIRHGASTLRC*TSRCASAWPPGARI
Trigger: GATACGTGCACCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAGCACCTGAGCGTGGATGCACCGTGCCTTATCAAAGCCAGCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCCGAAAAGACAGCGTGTaGGGATGCCTCTGTGGGTCA +
Preference number: 5 (lower is better)
Translates to: GKAWSVNACRQQVSGITCRKDSV*GCLCGS
Trigger: TGACCCACAGAGGCATCCCAACACGCTGTCTTTTCG...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCAACACGTTGGCAGGCTaGATGTCTCGGTGCATCACC +
Preference number: 5 (lower is better)
Translates to: CFPMPFACDTLARCRALINTLAG*MSRCIT
Trigger: GGTGATGCACCGAGACATCAAGCCTGCCAACGTGTT...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCGCTGTGATGAACACGTaGGCAGGCTTGATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: CFPMPFACDTLARCRALIAVMNT*AGLMSR
Trigger: CCGAGACATCAAGCCTGCCAACGTGTTCATCACAGC...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCGCTTCCCGATGCCTTTaGCCTGTGACACTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSASRCL*PVTLWP
Trigger: TGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGC...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCGCAGGCGACAGGGACTaGATTGTTCTGTGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: SCFPMPFACDTLARCRALAGDRD*IVLWRE
Trigger: TTCTCTCCACAGAACAATCAAGTCCCTGTCGCCTGC...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS TCA 90 bp CCACTGTCTTCCTGTCCAGCAGGCAGGTGGCCTTGTACACCTCGCTaGACTGTCCTCGGCCTATCTTCTTTTCGATCTGGAAGTCCGCCA +
Preference number: 5 (lower is better)
Translates to: PLSSCPAGRWPCTPR*TVLGLSSFRSGSPP
Trigger: TGGCGGACTTCCAGATCGAAAAGAAGATAGGCCGAGGACAGTTCAGCGAGGTGTACAAGGCCACCTGCCTGCTGGACAGGAAGACAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS GCA 90 bp AACACGTTGGCAGGCTTGATGTCTCGGTGCATCACCCGGCGTGAATaGATGTGCTCCACGGCGCTGCACAGCTGCACAAAGTACTTCCAT +
Preference number: 5 (lower is better)
Translates to: NTLAGLMSRCITRRE*MCSTALHSCTKYFH
Trigger: ATGGAAGTACTTTGTGCAGCTGTGCAGCGCCGTGGAGCACATGCATTCACGCCGGGTGATGCACCGAGACATCAAGCCTGCCAACGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000425237.5
ENST00000444973.5
ENST00000454453.5
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS GCA 90 bp AAAGTGGTGCTGGCTTTGATAAGGCACGGTGCATCCACGCTCAGGTaGTGGACATCCAGATGTGCATCTGCTTGGCCACCTGGTGCACGT +
Preference number: 5 (lower is better)
Translates to: KVVLALIRHGASTLR*WTSRCASAWPPGAR
Trigger: ACGTGCACCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAGCACCTGAGCGTGGATGCACCGTGCCTTATCAAAGCCAGCACCACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CCA 90 bp ATCTGCTTGGCCACCTGGTGCACGTATCCGATGTCAGGTCTCTGGTaGGGGTCAGGGCAGATGCACATGCTGACCAGTTCTCGTAACTTC +
Preference number: 5 (lower is better)
Translates to: ICLATWCTYPMSGLW*GSGQMHMLTSSRNF
Trigger: GAAGTTACGAGAACTGGTCAGCATGTGCATCTGCCCTGACCCCCACCAGAGACCTGACATCGGATACGTGCACCAGGTGGCCAAGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGCGAAAAGACAGCGTGTaGGGATGCCTCTGTGGGTCA +
Preference number: 5 (lower is better)
Translates to: RKGCIWRDCRADGVTADPRKDSV*GCLCGS
Trigger: TGACCCACAGAGGCATCCCAACACGCTGTCTTTTCG...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATTTGGGTGGTTCAGTaGCTTCAAGAGGCCGATCTC +
Preference number: 5 (lower is better)
Translates to: SCFPMPFACDTLARCRALIWVVQ*LQEADL
Trigger: GAGATCGGCCTCTTGAAGCAACTGAACCACCCAAAT...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCAATTTGGGTGGTTCAGTaGCTTCAAGAGGCCGATCTC +
Preference number: 5 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSIWVVQ*LQEADL
Trigger: GAGATCGGCCTCTTGAAGCAACTGAACCACCCAAAT...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCAACACGTTGGCAGGCTaGATGTCTCGGTGCATCACC +
Preference number: 5 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSNTLAG*MSRCIT
Trigger: GGTGATGCACCGAGACATCAAGCCTGCCAACGTGTT...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCGCTGTGATGAACACGTaGGCAGGCTTGATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSAVMNT*AGLMSR
Trigger: CCGAGACATCAAGCCTGCCAACGTGTTCATCACAGC...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGCAGATGTGCATCTGCTaGGCCACCTGGTGCACGTAT +
Preference number: 5 (lower is better)
Translates to: RKGCIWRDCRADGVTADPQMCIC*ATWCTY
Trigger: ATACGTGCACCAGGTGGCCAAGCAGATGCACATCTG...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGCAGATGTGCATCTGCTaGGCCACCTGGTGCACGTAT +
Preference number: 5 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSQMCIC*ATWCTY
Trigger: ATACGTGCACCAGGTGGCCAAGCAGATGCACATCTG...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAAAAGTGGTGCTGGCTTaGATAAGGCACGGTGCATCC +
Preference number: 5 (lower is better)
Translates to: GCIWRDCRADGVTADPSPKVVLA*IRHGAS
Trigger: GGATGCACCGTGCCTTATCAAAGCCAGCACCACTTT...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCAACCACCTGCCCTTATaGACCCAGCTGAGATTGTCC +
Preference number: 5 (lower is better)
Translates to: GKAWSVNACRQQVSGITCNHLPL*TQLRLS
Trigger: GGACAATCTCAGCTGGGTCAATAAGGGCAGGTGGTT...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAAACCACCTGCCCTTATaGACCCAGCTGAGATTGTCC +
Preference number: 5 (lower is better)
Translates to: GCIWRDCRADGVTADPSPNHLPL*TQLRLS
Trigger: GGACAATCTCAGCTGGGTCAATAAGGGCAGGTGGTT...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATGGGGCCTGGGAAGTaGTGTTTTTCAAGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: SCFPMPFACDTLARCRALMGPGK*CFSRFL
Trigger: GAGGAACCTTGAAAAACACAACTTCCCAGGCCCCAT...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGCATGCACAAAGTAGGTaGATTGCGTGCTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: RKGCIWRDCRADGVTADPHAQSR*IACWGW
Trigger: CCAGCCCCAGCACGCAATCAACCTACTTTGTGCATG...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCGTCCAGTTGGGCAGATaGTTCTCACAGTGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: SCFPMPFACDTLARCRALVQLGR*FSQCGK
Trigger: CTTTCCACACTGTGAGAACAATCTGCCCAACTGGAC...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp CCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATGGGTGGACCTCACTTaGGCCGGTTTCACAGAAATA +
Preference number: 5 (lower is better)
Translates to: PASRCLLPVTLWPGAGLSWVDLT*AGFTEI
Trigger: TATTTCTGTGAAACCGGCCAAAGTGAGGTCCACCCA...TGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp AGGCCTGGTGAGTGGCTGAGATCGTGCGCCTCCAGAGGGTCCAGTTGGGCAGATGGCCTCAGGTTTGGTTaGGTTTTGAAATGGGGTGAT +
Preference number: 5 (lower is better)
Translates to: RPGEWLRSCASRGSSWADGLRFG*VLKWGD
Trigger: ATCACCCCATTTCAAAACCAAACCAAACCTGAGGCC...ATCTGCCCAACTGGACCCTCTGGAGGCGCACGATCTCAGCCACTCACCAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS TCA 90 bp AGGGCACGAACTACAAGCGATCTCGCTGTCAGATATTTAGGACTGTaGGTCAGGCCCGTGAAGGTGACATCAGGGGGCCAGAACACCGGA +
Preference number: 5 (lower is better)
Translates to: RARTTSDLAVRYLGL*VRPVKVTSGGQNTG
Trigger: TCCGGTGTTCTGGCCCCCTGATGTCACCTTCACGGGCCTGACTCACAGTCCTAAATATCTGACAGCGAGATCGCTTGTAGTTCGTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425237.5
CDS-3UTR CAA 90 bp GCCGCCCGGCCCTGGGTGTTTCCTCCAGGAAAGGCCTGGTCAGTGAATGCCTGCAACGAGTCCAAATACTaGATGATATTTGGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: AARPWVFPPGKAWSVNACNESKY*MIFGWF
Trigger: GAACCACCCAAATATCATCAAGTATTTGGACTCGTT...GCAGGCATTCACTGACCAGGCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GATACAGGGGGCTGCCGTGGCTCGCTGAACCACCTGCCCTTATTGACCCAGCTGACAATGTTCAGCTCGTaGTCTTCGATAAACGAGTCC +
Preference number: 5 (lower is better)
Translates to: DTGGCRGSLNHLPLLTQLTMFSS*SSINES
Trigger: GGACTCGTTTATCGAAGACAACGAGCTGAACATTGT...CAGCTGGGTCAATAAGGGCAGGTGGTTCAGCGAGCCACGGCAGCCCCCTGTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GCAGCAGGTGTCAGGAATCACCTGCCCGATGCCAGCGCTGCTCTTGTCTGGAGGTGCTTCTTAAAGTACTaGATCATCTGCGAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: AAGVRNHLPDASAALVWRCFLKY*IICERS
Trigger: GGACCTCTCGCAGATGATCAAGTACTTTAAGAAGCA...CCTCCAGACAAGAGCAGCGCTGGCATCGGGCAGGTGATTCCTGACACCTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCAAAGTGGTGCTGGCTTaGATAAGGCACGGTGCATCC +
Preference number: 5 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSKVVLA*IRHGAS
Trigger: GGATGCACCGTGCCTTATCAAAGCCAGCACCACTTT...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCAACCACCTGCCCTTATaGACCCAGCTGAGATTGTCC +
Preference number: 5 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSNHLPL*TQLRLS
Trigger: GGACAATCTCAGCTGGGTCAATAAGGGCAGGTGGTT...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGGCAGGCGACAGGGACTaGATTGTTCTGTGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSAGDRD*IVLWRE
Trigger: TTCTCTCCACAGAACAATCAAGTCCCTGTCGCCTGC...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGTCCAGTTGGGCAGATaGTTCTCACAGTGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: GCIWRDCRADGVTADPSPVQLGR*FSQCGK
Trigger: CTTTCCACACTGTGAGAACAATCTGCCCAACTGGAC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS GCA 90 bp GGGTGGTTCAGTTGCTTCAAGAGGCCGATCTCCTTGACACAGTCCTaGCTCGCCTTGGCGTCCATCATCTCAAAGATCTGCACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GWFSCFKRPISLTQS*LALASIISKICTFF
Trigger: GAAGAAGGTGCAGATCTTTGAGATGATGGACGCCAAGGCGAGGCAGGACTGTGTCAAGGAGATCGGCCTCTTGAAGCAACTGAACCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CCA 90 bp TTGTACACCTCGCTGAACTGTCCTCGGCCTATCTTCTTTTCGATCTaGAAGTCCGCCAGCGAGCAGCGAAAAGACAGCGTGTTGGGATGC +
Preference number: 5 (lower is better)
Translates to: LYTSLNCPRPIFFSI*KSASEQRKDSVLGC
Trigger: GCATCCCAACACGCTGTCTTTTCGCTGCTCGCTGGCGGACTTCCAGATCGAAAAGAAGATAGGCCGAGGACAGTTCAGCGAGGTGTACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATAAGAGGCCGATCTCCTaGACACAGTCCTGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDKRPIS*TQSCLA
Trigger: GGCGAGGCAGGACTGTGTCAAGGAGATCGGCCTCTT...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TCCTGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCACAATGTTCAGCTCGTaGTCTTCGATAAACGAGTCC +
Preference number: 5 (lower is better)
Translates to: SCFPMPFACDTLARCRALTMFSS*SSINES
Trigger: GGACTCGTTTATCGAAGACAACGAGCTGAACATTGT...GAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAGCTGGAAGCAGAATGTaGGCAAAAAGTTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: GCIWRDCRADGVTADPSPAGSRM*AKSWSG
Trigger: TCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGC...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGCACGAACTCGAGGCCTaGGCAGGCTCTGCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: RTALRFSISHASFPWRKMHELEA*AGSAPP
Trigger: AGGAGGAGCAGAGCCTGCCAAGGCCTCGAGTTCGTG...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373600.7
ENST00000394199.6
CDS GCA 90 bp ACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATAAGGCACGGTaGATCCACGCTCAGGTGCTGGACATCCAGATGTGCATCTGCTTG +
Preference number: 5 (lower is better)
Translates to: TTQVRQSGAGFDKAR*IHAQVLDIQMCICL
Trigger: CAAGCAGATGCACATCTGGATGTCCAGCACCTGAGCGTGGATGCACCGTGCCTTATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATAGCAGGCAGGTGGCCTaGTACACCTCGCTGAACTGT +
Preference number: 5 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDSRQVA*YTSLNC
Trigger: ACAGTTCAGCGAGGTGTACAAGGCCACCTGCCTGCT...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGAAGAGGCCGATCTCCTaGACACAGTCCTGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: GGITLKIHITIQIQGAAVKRPIS*TQSCLA
Trigger: GGCGAGGCAGGACTGTGTCAAGGAGATCGGCCTCTT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGAGTCCAACAATGTTCAGCTCGTaGTCTTCGATAAACGAGTCC +
Preference number: 5 (lower is better)
Translates to: GCIWRDCRADGVTADPSPTMFSS*SSINES
Trigger: GGACTCGTTTATCGAAGACAACGAGCTGAACATTGT...TGGACTCGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCACAATGTTCAGCTCGTaGTCTTCGATAAACGAGTCC +
Preference number: 5 (lower is better)
Translates to: CFPMPFACDTLARCRALITMFSS*SSINES
Trigger: GGACTCGTTTATCGAAGACAACGAGCTGAACATTGT...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGCTTCCCGATGCCTTTTGCCTGTGACACTCTGGCCAGGTGCAGGGCTCTCATCTGCTTCTTAAAGTACTaGATCATCTGCGAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: CFPMPFACDTLARCRALICFLKY*IICERS
Trigger: GGACCTCTCGCAGATGATCAAGTACTTTAAGAAGCA...GATGAGAGCCCTGCACCTGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCTGCTTCTTAAAGTACTaGATCATCTGCGAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GKAWSVNACRQQVSGITCCFLKY*IICERS
Trigger: GGACCTCTCGCAGATGATCAAGTACTTTAAGAAGCA...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GAAGTCAGAGTGGACTCCCTTGAGGCTTCAGGTGACCATCGATACCTACCCTTTGCTGTGATGAACACGTaGGCAGGCTTGATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: EVRVDSLEASGDHRYLPFAVMNT*AGLMSR
Trigger: CCGAGACATCAAGCCTGCCAACGTGTTCATCACAGC...AAAGGGTAGGTATCGATGGTCACCTGAAGCCTCAAGGGAGTCCACTCTGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTGCGTCCCACACGAGTTaGCGGCGCAGCGGCCGCACG +
Preference number: 5 (lower is better)
Translates to: EHISGFLHMIQVYINSRLASHTS*RRSGRT
Trigger: CGTGCGGCCGCTGCGCCGCAAACTCGTGTGGGACGC...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320246.10
ENST00000373600.7
CDS-3UTR CAA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATCGAAAAGACAGCGTGTaGGGATGCCTCTGTGGGTCA +
Preference number: 5 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDRKDSV*GCLCGS
Trigger: TGACCCACAGAGGCATCCCAACACGCTGTCTTTTCG...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGAGCAGGCAGGTGGCCTaGTACACCTCGCTGAACTGT +
Preference number: 5 (lower is better)
Translates to: GGITLKIHITIQIQGAAVSRQVA*YTSLNC
Trigger: ACAGTTCAGCGAGGTGTACAAGGCCACCTGCCTGCT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp AGGAAAGGCTGCATATGGAGAGACTGTCGGGCTGACGGTGTCACAGCAGATCCGACAATGTTCAGCTCGTaGTCTTCGATAAACGAGTCC +
Preference number: 5 (lower is better)
Translates to: RKGCIWRDCRADGVTADPTMFSS*SSINES
Trigger: GGACTCGTTTATCGAAGACAACGAGCTGAACATTGT...CGGATCTGCTGTGACACCGTCAGCCCGACAGTCTCTCCATATGCAGCCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATCAGATGTGCATCTGCTaGGCCACCTGGTGCACGTAT +
Preference number: 5 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDQMCIC*ATWCTY
Trigger: ATACGTGCACCAGGTGGCCAAGCAGATGCACATCTG...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGGCTTCCCGATGCCTTTaGCCTGTGACACTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: GGITLKIHITIQIQGAAVASRCL*PVTLWP
Trigger: TGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGC...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS GCA 90 bp CCGCTTCTGCTTCTTAAAGTACTTGATCATCTGCGAGAGGTCCCCTaGGTCAGCCAACTCCAGCACAATGTTCAGCTCGTTGTCTTCGAT +
Preference number: 5 (lower is better)
Translates to: PLLLLKVLDHLREVP*VSQLQHNVQLVVFD
Trigger: ATCGAAGACAACGAGCTGAACATTGTGCTGGAGTTGGCTGACGCAGGGGACCTCTCGCAGATGATCAAGTACTTTAAGAAGCAGAAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000454453.5
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp CATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTCGAAAAGACAGCGTGTaGGGATGCCTCTGTGGGTCA +
Preference number: 5 (lower is better)
Translates to: HRYLPFLLAEFVWGGLRFRKDSV*GCLCGS
Trigger: TGACCCACAGAGGCATCCCAACACGCTGTCTTTTCG...AAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGCGAAAAGACAGCGTGTaGGGATGCCTCTGTGGGTCA +
Preference number: 5 (lower is better)
Translates to: GGITLKIHITIQIQGAAVRKDSV*GCLCGS
Trigger: TGACCCACAGAGGCATCCCAACACGCTGTCTTTTCG...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GGAAAGGCCTGGTCAGTGAATGCCTGCAGGCAGCAGGTGTCAGGAATCACCTGCAACGAGTCCAAATACTaGATGATATTTGGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: GKAWSVNACRQQVSGITCNESKY*MIFGWF
Trigger: GAACCACCCAAATATCATCAAGTATTTGGACTCGTT...GCAGGTGATTCCTGACACCTGCTGCCTGCAGGCATTCACTGACCAGGCCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGGCTGTGATGAACACGTaGGCAGGCTTGATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: RTALRFSISHASFPWRKMAVMNT*AGLMSR
Trigger: CCGAGACATCAAGCCTGCCAACGTGTTCATCACAGC...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGCAGATGTGCATCTGCTaGGCCACCTGGTGCACGTAT +
Preference number: 5 (lower is better)
Translates to: GGITLKIHITIQIQGAAVQMCIC*ATWCTY
Trigger: ATACGTGCACCAGGTGGCCAAGCAGATGCACATCTG...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATAACCACCTGCCCTTATaGACCCAGCTGAGATTGTCC +
Preference number: 5 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDNHLPL*TQLRLS
Trigger: GGACAATCTCAGCTGGGTCAATAAGGGCAGGTGGTT...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCAGGTTTGGTTTGGTTTaGAAATGGGGTGATAAGTGC +
Preference number: 5 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSRFGLV*KWGDKC
Trigger: GCACTTATCACCCCATTTCAAAACCAAACCAAACCT...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGCGAGGGCACGAACTTTaGAAGTGGCTCCTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: GGITLKIHITIQIQGAAVRGHEL*KWLLRS
Trigger: GCTTCTCAGGAGCCACTTCAAAAGTTCGTGCCCTCG...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546191.5
CDS-3UTR CAA 90 bp GAACCTGCTGAACCCTGTGGTCTTAGCTGTTCTAGGCTACCAGGTGGCCACTCGAACGAGTCCAAATACTaGATGATATTTGGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: EPAEPCGLSCSRLPGGHSNESKY*MIFGWF
Trigger: GAACCACCCAAATATCATCAAGTATTTGGACTCGTT...CGAGTGGCCACCTGGTAGCCTAGAACAGCTAAGACCACAGGGTTCAGCAGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGCTGTAAGGCTGGGCAGCCTTTTGGGGAACCTGCTGAACCCTGTGGTCTTAGCAACGAGTCCAAATACTaGATGATATTTGGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: CCKAGQPFGEPAEPCGLSNESKY*MIFGWF
Trigger: GAACCACCCAAATATCATCAAGTATTTGGACTCGTT...GCTAAGACCACAGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCTTACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp AGCTGGAAGCAGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGAAGAGGCCGATCTCCTaGACACAGTCCTGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: SWKQNVGKKLVWNQKNLQKRPIS*TQSCLA
Trigger: GGCGAGGCAGGACTGTGTCAAGGAGATCGGCCTCTT...CTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGATTTGGGTGGTTCAGTaGCTTCAAGAGGCCGATCTC +
Preference number: 5 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGIWVVQ*LQEADL
Trigger: GAGATCGGCCTCTTGAAGCAACTGAACCACCCAAAT...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGATTTGGGTGGTTCAGTaGCTTCAAGAGGCCGATCTC +
Preference number: 5 (lower is better)
Translates to: GGITLKIHITIQIQGAAVIWVVQ*LQEADL
Trigger: GAGATCGGCCTCTTGAAGCAACTGAACCACCCAAAT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGAACACGTTGGCAGGCTaGATGTCTCGGTGCATCACC +
Preference number: 5 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTNTLAG*MSRCIT
Trigger: GGTGATGCACCGAGACATCAAGCCTGCCAACGTGTT...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGGCTGTGATGAACACGTaGGCAGGCTTGATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTAVMNT*AGLMSR
Trigger: CCGAGACATCAAGCCTGCCAACGTGTTCATCACAGC...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATGCTGGAAGCAGAATGTaGGCAAAAAGTTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDAGSRM*AKSWSG
Trigger: TCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGC...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGTGGGTGGACCTCACTTaGGCCGGTTTCACAGAAATA +
Preference number: 5 (lower is better)
Translates to: GGITLKIHITIQIQGAAVWVDLT*AGFTEI
Trigger: TATTTCTGTGAAACCGGCCAAAGTGAGGTCCACCCA...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGTTTTGCTGGCTGAATTaGTTTGGGGTGGCCTCAGGT +
Preference number: 5 (lower is better)
Translates to: RTALRFSISHASFPWRKMFCWLN*FGVASG
Trigger: ACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAA...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp AGCTGGAAGCAGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGAGCAGGCAGGTGGCCTaGTACACCTCGCTGAACTGT +
Preference number: 5 (lower is better)
Translates to: SWKQNVGKKLVWNQKNLQSRQVA*YTSLNC
Trigger: ACAGTTCAGCGAGGTGTACAAGGCCACCTGCCTGCT...CTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATTGCTTCTTAAAGTACTaGATCATCTGCGAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDCFLKY*IICERS
Trigger: GGACCTCTCGCAGATGATCAAGTACTTTAAGAAGCA...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GAACGATGGAATTACCTCATGAGGGCAGAAACTCGGCTGATGATGAGTTTCAAAAACCACCTGCCCTTATaGACCCAGCTGAGATTGTCC +
Preference number: 5 (lower is better)
Translates to: ERWNYLMRAETRLMMSFKNHLPL*TQLRLS
Trigger: GGACAATCTCAGCTGGGTCAATAAGGGCAGGTGGTT...TTTGAAACTCATCATCAGCCGAGTTTCTGCCCTCATGAGGTAATTCCATCGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGAACCACCTGCCCTTATaGACCCAGCTGAGATTGTCC +
Preference number: 5 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTNHLPL*TQLRLS
Trigger: GGACAATCTCAGCTGGGTCAATAAGGGCAGGTGGTT...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp CATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTGGCCTCAGGTTTGGTTaGGTTTTGAAATGGGGTGAT +
Preference number: 5 (lower is better)
Translates to: HRYLPFLLAEFVWGGLRFGLRFG*VLKWGD
Trigger: ATCACCCCATTTCAAAACCAAACCAAACCTGAGGCC...AAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGATTTGGGTGGTTCAGTaGCTTCAAGAGGCCGATCTC +
Preference number: 5 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTIWVVQ*LQEADL
Trigger: GAGATCGGCCTCTTGAAGCAACTGAACCACCCAAAT...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGACAATGTTCAGCTCGTaGTCTTCGATAAACGAGTCC +
Preference number: 5 (lower is better)
Translates to: GGITLKIHITIQIQGAAVTMFSS*SSINES
Trigger: GGACTCGTTTATCGAAGACAACGAGCTGAACATTGT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGACAATGTTCAGCTCGTaGTCTTCGATAAACGAGTCC +
Preference number: 5 (lower is better)
Translates to: RTALRFSISHASFPWRKMTMFSS*SSINES
Trigger: GGACTCGTTTATCGAAGACAACGAGCTGAACATTGT...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp CATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGGTGGCCTCAGGTTTTGCTTCTTAAAGTACTaGATCATCTGCGAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: HRYLPFLLAEFVWGGLRFCFLKY*IICERS
Trigger: GGACCTCTCGCAGATGATCAAGTACTTTAAGAAGCA...AAACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGGCTGTGATGAACACGTaGGCAGGCTTGATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLAVMNT*AGLMSR
Trigger: CCGAGACATCAAGCCTGCCAACGTGTTCATCACAGC...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGCAGATGTGCATCTGCTaGGCCACCTGGTGCACGTAT +
Preference number: 5 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLQMCIC*ATWCTY
Trigger: ATACGTGCACCAGGTGGCCAAGCAGATGCACATCTG...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAAAGGCTGGGCAGCCTTTaGGGGAACCTGCTGAACCCT +
Preference number: 5 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFERLGSL*GNLLNP
Trigger: AGGGTTCAGCAGGTTCCCCAAAAGGCTGCCCAGCCT...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp AGGACAGCCCTTCGCTTTTCTATATCCCATGCTTCCTTCCCATGGAGGAAAATGCGATACCTACCCTTTTaGCTGGCTGAATTTGTTTGG +
Preference number: 5 (lower is better)
Translates to: RTALRFSISHASFPWRKMRYLPF*LAEFVW
Trigger: CCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCG...CATTTTCCTCCATGGGAAGGAAGCATGGGATATAGAAAAGCGAAGGGCTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp AGGCTTCAGGTGACCATCGATACCTACCCTTTTTGCTGGCTGAATTTGTTTGGGCGATACCTACCCTTTTaGCTGGCTGAATTTGTTTGG +
Preference number: 5 (lower is better)
Translates to: RLQVTIDTYPFCWLNLFGRYLPF*LAEFVW
Trigger: CCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCG...CCCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCGATGGTCACCTGAAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTAGCAGGCAGGTGGCCTaGTACACCTCGCTGAACTGT +
Preference number: 5 (lower is better)
Translates to: EHISGFLHMIQVYINSRLSRQVA*YTSLNC
Trigger: ACAGTTCAGCGAGGTGTACAAGGCCACCTGCCTGCT...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGGCCACTCGAAGAGAAGACGACTCAAGTAAGGCAAAGTGGTGCTGGCTTTGATAACGAGTCCAAATACTaGATGATATTTGGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: WPLEEKTTQVRQSGAGFDNESKY*MIFGWF
Trigger: GAACCACCCAAATATCATCAAGTATTTGGACTCGTT...ATCAAAGCCAGCACCACTTTGCCTTACTTGAGTCGTCTTCTCTTCGAGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp AGCTGGAAGCAGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGAAAGTGGTGCTGGCTTaGATAAGGCACGGTGCATCC +
Preference number: 5 (lower is better)
Translates to: SWKQNVGKKLVWNQKNLQKVVLA*IRHGAS
Trigger: GGATGCACCGTGCCTTATCAAAGCCAGCACCACTTT...CTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTGCTTCCCGATGCCTTTaGCCTGTGACACTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: EHISGFLHMIQVYINSRLASRCL*PVTLWP
Trigger: TGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGC...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAGCTTCCCGATGCCTTTaGCCTGTGACACTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLASRCL*PVTLWP
Trigger: TGGCCAGAGTGTCACAGGCAAAAGGCATCGGGAAGC...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATCTACTCTCCAGAGGGTCCAGTaGGGCAGATTGTTCTCACAG +
Preference number: 5 (lower is better)
Translates to: SRFLKKLCCRRCLSFESTLQRVQ*GRLFSQ
Trigger: CTGTGAGAACAATCTGCCCAACTGGACCCTCTGGAG...AGTAGATTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGAGGTTTGGTTTGGTTTaGAAATGGGGTGATAAGTGC +
Preference number: 5 (lower is better)
Translates to: GGITLKIHITIQIQGAAVRFGLV*KWGDKC
Trigger: GCACTTATCACCCCATTTCAAAACCAAACCAAACCT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp GGAGGAATTACCCTAAAGATTCACATTACAATCCAGATACAGGGGGCTGCCGTGAACGAGTCCAAATACTaGATGATATTTGGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: GGITLKIHITIQIQGAAVNESKY*MIFGWF
Trigger: GAACCACCCAAATATCATCAAGTATTTGGACTCGTT...CACGGCAGCCCCCTGTATCTGGATTGTAATGTGAATCTTTAGGGTAATTCCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTAACACGTTGGCAGGCTaGATGTCTCGGTGCATCACC +
Preference number: 5 (lower is better)
Translates to: EHISGFLHMIQVYINSRLNTLAG*MSRCIT
Trigger: GGTGATGCACCGAGACATCAAGCCTGCCAACGTGTT...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAACATGCACAAAGTAGGTaGATTGCGTGCTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFEHAQSR*IACWGW
Trigger: CCAGCCCCAGCACGCAATCAACCTACTTTGTGCATG...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp GAACGATGGAATTACCTCATGAGGGCAGAAACTCGGCTGATGATGAGTTTCAAACGATACCTACCCTTTTaGCTGGCTGAATTTGTTTGG +
Preference number: 5 (lower is better)
Translates to: ERWNYLMRAETRLMMSFKRYLPF*LAEFVW
Trigger: CCAAACAAATTCAGCCAGCAAAAAGGGTAGGTATCG...TTTGAAACTCATCATCAGCCGAGTTTCTGCCCTCATGAGGTAATTCCATCGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAAAAAGTGGTGCTGGCTTaGATAAGGCACGGTGCATCC +
Preference number: 5 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFEKVVLA*IRHGAS
Trigger: GGATGCACCGTGCCTTATCAAAGCCAGCACCACTTT...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp ATTGACCCAGCTGAGATTGTCCACAACAGTATAAAGAAAGGACTTTGGAATCTGGCTGGAAGCAGAATGTaGGCAAAAAGTTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: IDPAEIVHNSIKKGLWNLAGSRM*AKSWSG
Trigger: TCCAGACCAACTTTTTGCCAACATTCTGCTTCCAGC...CAGATTCCAAAGTCCTTTCTTTATACTGTTGTGGACAATCTCAGCTGGGTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp AGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGTGGTAAGCACTTTTGCTGGCTGAATTaGTTTGGGGTGGCCTCAGGT +
Preference number: 5 (lower is better)
Translates to: RMLAKSWSGIRKIFSGKHFCWLN*FGVASG
Trigger: ACCTGAGGCCACCCCAAACAAATTCAGCCAGCAAAA...GTGCTTACCACTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAATTTGGGTGGTTCAGTaGCTTCAAGAGGCCGATCTC +
Preference number: 5 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLIWVVQ*LQEADL
Trigger: GAGATCGGCCTCTTGAAGCAACTGAACCACCCAAAT...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GACTGTCATGAAGTCAGTGACGACAGCTCAGACAATTGGAAGGTTAACTTTACGAACGAGTCCAAATACTaGATGATATTTGGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: DCHEVSDDSSDNWKVNFTNESKY*MIFGWF
Trigger: GAACCACCCAAATATCATCAAGTATTTGGACTCGTT...CGTAAAGTTAACCTTCCAATTGTCTGAGCTGTCGTCACTGACTTCATGACAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTAATGGGGCCTGGGAAGTaGTGTTTTTCAAGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLMGPGK*CFSRFL
Trigger: GAGGAACCTTGAAAAACACAACTTCCCAGGCCCCAT...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAATGGGTGGACCTCACTTaGGCCGGTTTCACAGAAATA +
Preference number: 5 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFEWVDLT*AGFTEI
Trigger: TATTTCTGTGAAACCGGCCAAAGTGAGGTCCACCCA...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp AGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGTGGTAAGCACACAATGTTCAGCTCGTaGTCTTCGATAAACGAGTCC +
Preference number: 5 (lower is better)
Translates to: RMLAKSWSGIRKIFSGKHTMFSS*SSINES
Trigger: GGACTCGTTTATCGAAGACAACGAGCTGAACATTGT...GTGCTTACCACTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp AGAATGTTGGCAAAAAGTTGGTCTGGAATCAGAAAAATCTTCAGTGGTAAGCACTGCTTCTTAAAGTACTaGATCATCTGCGAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: RMLAKSWSGIRKIFSGKHCFLKY*IICERS
Trigger: GGACCTCTCGCAGATGATCAAGTACTTTAAGAAGCA...GTGCTTACCACTGAAGATTTTTCTGATTCCAGACCAACTTTTTGCCAACATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS-3UTR CAA 90 bp AAGATACTAAGAACTAAACTGAACCCGGTACTAACCATTTTCAAAGGCTCACTATGCTTCTTAAAGTACTaGATCATCTGCGAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: KILRTKLNPVLTIFKGSLCFLKY*IICERS
Trigger: GGACCTCTCGCAGATGATCAAGTACTTTAAGAAGCA...TAGTGAGCCTTTGAAAATGGTTAGTACCGGGTTCAGTTTAGTTCTTAGTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp GAACACATTTCTGGTTTCCTACACATGATACAGGTGTACATTAATTCTCGACTTTGCTTCTTAAAGTACTaGATCATCTGCGAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: EHISGFLHMIQVYINSRLCFLKY*IICERS
Trigger: GGACCTCTCGCAGATGATCAAGTACTTTAAGAAGCA...AAGTCGAGAATTAATGTACACCTGTATCATGTGTAGGAAACCAGAAATGTGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS-3UTR CAA 90 bp TGTTTTTCAAGGTTCCTCAAGAAATTGTGCTGCAGACGCTGTTTAAGTTTTGAAAGGTTTGGTTTGGTTTaGAAATGGGGTGATAAGTGC +
Preference number: 5 (lower is better)
Translates to: CFSRFLKKLCCRRCLSFERFGLV*KWGDKC
Trigger: GCACTTATCACCCCATTTCAAAACCAAACCAAACCT...TTCAAAACTTAAACAGCGTCTGCAGCACAATTTCTTGAGGAACCTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
CDS CAA 90 bp GTGCGCTGGCCCGCGGGCGGCTGGAGCGGTGCGTCCCACACGAGTTaGCGGCGCAGCGGCCGCACGCCCGTCAGCTCGGTTCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: VRWPAGGWSGASHTS*RRSGRTPVSSVPPP
Trigger: CGGCGGCGGAACCGAGCTGACGGGCGTGCGGCCGCTGCGCCGCAAACTCGTGTGGGACGCACCGCTCCAGCCGCCCGCGGGCCAGCGCAC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320246.10
CDS CCA 72 bp GCCGCTGGGGGACCGGTGCGCTGGCCCGCGGGCGGCTaGAGCGGTGCGTCCCACACGAGTTTGCGGCGCAGC +
Preference number: 6 (lower is better)
Translates to: AAGGPVRWPAGG*SGASHTSLRRS
Trigger: GCTGCGCCGCAAACTCGTGTGGGACGCACCGCTCCAGCCGCCCGCGGGCCAGCGCACCGGTCCCCCAGCGGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320246.10
ENST00000373600.7
CDS GCA 72 bp CCGCGGGCGGCTGGAGCGGTGCGTCCCACACGAGTTTaGGGCGCAGCGGCCGCACGCCCGTCAGCTCGGTTC +
Preference number: 6 (lower is better)
Translates to: PRAAGAVRPTRV*GAAAARPSARF
Trigger: GAACCGAGCTGACGGGCGTGCGGCCGCTGCGCCGCAAACTCGTGTGGGACGCACCGCTCCAGCCGCCCGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320246.10
ENST00000373600.7
CDS CAA 72 bp CCCGCGGGCGGCTGGAGCGGTGCGTCCCACACGAGTTaGCGGCGCAGCGGCCGCACGCCCGTCAGCTCGGTT +
Preference number: 6 (lower is better)
Translates to: PAGGWSGASHTS*RRSGRTPVSSV
Trigger: AACCGAGCTGACGGGCGTGCGGCCGCTGCGCCGCAAACTCGTGTGGGACGCACCGCTCCAGCCGCCCGCGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320246.10
ENST00000373600.7
CDS GCA 72 bp CTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCCTaGATGCCAGCCTCACGAGGGCACGAACGGCGCGCG +
Preference number: 6 (lower is better)
Translates to: LHGACGRAVLPS*MPASRGHERRA
Trigger: CGCGCGCCGTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320246.10
CDS GCA 72 bp CTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCCTaGATGCCAGCCTCACGAGGGCACGAACTCGAGGCC +
Preference number: 6 (lower is better)
Translates to: LHGACGRAVLPS*MPASRGHELEA
Trigger: GGCCTCGAGTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373600.7
ENST00000394199.6
ENST00000423785.5
CDS GCA 72 bp CTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCCTaGATGCCAGCCTCACGAGGGCACGAAAGGGCGCAG +
Preference number: 6 (lower is better)
Translates to: LHGACGRAVLPS*MPASRGHERAQ
Trigger: CTGCGCCCTTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373603.5
ENST00000540326.5
CDS GCA 72 bp CTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCCTaGATGCCAGCCTCACGAGGGCACGAACCGCTGAGC +
Preference number: 6 (lower is better)
Translates to: LHGACGRAVLPS*MPASRGHEPLS
Trigger: GCTCAGCGGTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447379.1
CDS GCA 72 bp CTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCCTaGATGCCAGCCTCACGAGGGCACGAACCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: LHGACGRAVLPS*MPASRGHEPGS
Trigger: GGACCCAGGTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539416.5
CDS GCA 72 bp GGTCTGCTCCACTCTGGGTTGAGGGCAGACATGAGGTaGCTGGGCCTCCAGGGAGCTGGGTCGCCTCTCTGG +
Preference number: 6 (lower is better)
Translates to: GLLHSGLRADMR*LGLQGAGSPLW
Trigger: CCAGAGAGGCGACCCAGCTCCCTGGAGGCCCAGGCACCTCATGTCTGCCCTCAACCCAGAGTGGAGCAGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422297.5
ENST00000546191.5
CDS CAA 90 bp CTCTGTGGGTCAGGAGGATGCACAGGCCCCAGGGTGTGGCAGAGGTaGTTGGAACTCCCTCCATGGGGCATGTGGCCGGGCTGTCCTGCC +
Preference number: 6 (lower is better)
Translates to: LCGSGGCTGPRVWQR*LELPPWGMWPGCPA
Trigger: GGCAGGACAGCCCGGCCACATGCCCCATGGAGGGAGTTCCAACAACCTCTGCCACACCCTGGGGCCTGTGCATCCTCCTGACCCACAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CAA 90 bp CTGCCATCCTGCATGCCAGCCTCACGAGGGCACGAACTCGAGGCCTaGGCAGGCTCTGCTCCTCCTGCCGGAAATGAGCTGCCTCCCAGC +
Preference number: 6 (lower is better)
Translates to: LPSCMPASRGHELEA*AGSAPPAGNELPPS
Trigger: GCTGGGAGGCAGCTCATTTCCGGCAGGAGGAGCAGAGCCTGCCAAGGCCTCGAGTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373600.7
ENST00000394199.6
ENST00000423785.5
CDS CAA 90 bp TGCTGTGGGTCAGGAGGATGCACAGGCCCCAGGGTGTGGCAGAGGTaGTTGGAACTCCCTCCATGGGGCATGTGGCCGGGCTGTCCTGCC +
Preference number: 6 (lower is better)
Translates to: CCGSGGCTGPRVWQR*LELPPWGMWPGCPA
Trigger: GGCAGGACAGCCCGGCCACATGCCCCATGGAGGGAGTTCCAACAACCTCTGCCACACCCTGGGGCCTGTGCATCCTCCTGACCCACAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454453.5
CDS GCA 72 bp CTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCCTaGATGCCAGCCTCACGAGGGCACGAACTACAAGCG +
Preference number: 6 (lower is better)
Translates to: LHGACGRAVLPS*MPASRGHELQA
Trigger: CGCTTGTAGTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425237.5
CDS GCA 72 bp CTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCCTaGATGCCAGCCTCACGAGGGCACGAACCCAACAAC +
Preference number: 6 (lower is better)
Translates to: LHGACGRAVLPS*MPASRGHEPNN
Trigger: GTTGTTGGGTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000444973.5
ENST00000454453.5
ENST00000545174.5
CDS CCA 72 bp GAGGATGCACAGGCCCCAGGGTGTGGCAGAGGTTGTTaGAACTCCCTCCATGGGGCATGTGGCCGGGCTGTC +
Preference number: 6 (lower is better)
Translates to: EDAQAPGCGRGC*NSLHGACGRAV
Trigger: GACAGCCCGGCCACATGCCCCATGGAGGGAGTTCCAACAACCTCTGCCACACCCTGGGGCCTGTGCATCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000454453.5
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CAA 72 bp TCAGGAGGATGCACAGGCCCCAGGGTGTGGCAGAGGTaGTTGGAACTCCCTCCATGGGGCATGTGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: SGGCTGPRVWQR*LELPPWGMWPG
Trigger: GCCCGGCCACATGCCCCATGGAGGGAGTTCCAACAACCTCTGCCACACCCTGGGGCCTGTGCATCCTCCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000454453.5
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS GCA 72 bp CTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCCTaGATGCCAGCCTCACGAGGGCACGAAAAGCGATCT +
Preference number: 6 (lower is better)
Translates to: LHGACGRAVLPS*MPASRGHEKRS
Trigger: AGATCGCTTTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373596.5
CDS CCA 72 bp TGGCAGAGGTTGTTGGAACTCCCTCCATGGGGCATGTaGCCGGGCTGTCCTGCCATCCTGCATGCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: WQRLLELPPWGM*PGCPAILHASL
Trigger: GAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAGGGAGTTCCAACAACCTCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000454453.5
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CAA 72 bp TGCATGCCAGCCTCACGAGGGCACGAACTCGAGGCCTaGGCAGGCTCTGCTCCTCCTGCCGGAAATGAGCTG +
Preference number: 6 (lower is better)
Translates to: CMPASRGHELEA*AGSAPPAGNEL
Trigger: CAGCTCATTTCCGGCAGGAGGAGCAGAGCCTGCCAAGGCCTCGAGTTCGTGCCCTCGTGAGGCTGGCATGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373600.7
ENST00000394199.6
ENST00000423785.5
CDS TCA 72 bp GTTGGCAGGCTTGATGTCTCGGTGCATCACCCGGCGTaGATGCATGTGCTCCACGGCGCTGCACAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: VGRLDVSVHHPA*MHVLHGAAQLH
Trigger: GTGCAGCTGTGCAGCGCCGTGGAGCACATGCATTCACGCCGGGTGATGCACCGAGACATCAAGCCTGCCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000425237.5
ENST00000444973.5
ENST00000454453.5
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS TCA 72 bp TCCCCACTAGGGAGTGGGCTGCGGTGGTCTCAGAGCTaGAGAAGCGGCCCAGACCAAGGTCACCGAGCTTCA +
Preference number: 6 (lower is better)
Translates to: SPLGSGLRWSQS*RSGPDQGHRAS
Trigger: TGAAGCTCGGTGACCTTGGTCTGGGCCGCTTCTTCAGCTCTGAGACCACCGCAGCCCACTCCCTAGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000425237.5
ENST00000444973.5
ENST00000454453.5
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS TCA 72 bp AGCTTGGCCTCCCAAGTTGTGCCCTCAAAGGCACCCTaGGGCTCCCCAGAACTTGCAGGCTGGCTCCCAGCA +
Preference number: 6 (lower is better)
Translates to: SLASQVVPSKAP*GSPELAGWLPA
Trigger: TGCTGGGAGCCAGCCTGCAAGTTCTGGGGAGCCTCAGGGTGCCTTTGAGGGCACAACTTGGGAGGCCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447379.1
CDS GCA 72 bp CTCCATGGGGCATGTGGCCGGGCTGTCCTGCCATCCTaGATGCCAGCCTCACGAGGGCACGAACTTTTGAAG +
Preference number: 6 (lower is better)
Translates to: LHGACGRAVLPS*MPASRGHELLK
Trigger: CTTCAAAAGTTCGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCGGCCACATGCCCCATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422297.5
ENST00000546191.5
CDS CAA 72 bp CCGAGCTTCACGACGCCCGTGGCTGTGATGAACACGTaGGCAGGCTTGATGTCTCGGTGCATCACCCGGCGT +
Preference number: 6 (lower is better)
Translates to: PSFTTPVAVMNT*AGLMSRCITRR
Trigger: ACGCCGGGTGATGCACCGAGACATCAAGCCTGCCAACGTGTTCATCACAGCCACGGGCGTCGTGAAGCTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000425237.5
ENST00000444973.5
ENST00000454453.5
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CAA 90 bp CGGTGCATCCACGCTCAGGTGCTGGACATCCAGATGTGCATCTGCTaGGCCACCTGGTGCACGTATCCGATGTCAGGTCTCTGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: RCIHAQVLDIQMCIC*ATWCTYPMSGLWWG
Trigger: CCCCCACCAGAGACCTGACATCGGATACGTGCACCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAGCACCTGAGCGTGGATGCACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS GCA 72 bp GACAGCGTGTTGGGATGCCTCTGTGGGTCAGGAGGATaGACAGGCCCCAGGGTGTGGCAGAGGTTGTTGGAA +
Preference number: 6 (lower is better)
Translates to: DSVLGCLCGSGG*TGPRVWQRLLE
Trigger: TTCCAACAACCTCTGCCACACCCTGGGGCCTGTGCATCCTCCTGACCCACAGAGGCATCCCAACACGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS GCA 72 bp CCTTGGCAGGCTCTGCTCCTCCTGCCGGAAATGAGCTaGCTCCCAGCAAACTTCTCTCCTGGGCATCTCCTC +
Preference number: 6 (lower is better)
Translates to: PWQALLLLPEMS*LPANFSPGHLL
Trigger: GAGGAGATGCCCAGGAGAGAAGTTTGCTGGGAGGCAGCTCATTTCCGGCAGGAGGAGCAGAGCCTGCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373600.7
ENST00000423785.5
CDS CCA 72 bp TTGGCCACCTGGTGCACGTATCCGATGTCAGGTCTCTaGTGGGGGTCAGGGCAGATGCACATGCTGACCAGT +
Preference number: 6 (lower is better)
Translates to: LATWCTYPMSGL*WGSGQMHMLTS
Trigger: ACTGGTCAGCATGTGCATCTGCCCTGACCCCCACCAGAGACCTGACATCGGATACGTGCACCAGGTGGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CCA 72 bp GTGCTGGACATCCAGATGTGCATCTGCTTGGCCACCTaGTGCACGTATCCGATGTCAGGTCTCTGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: VLDIQMCICLAT*CTYPMSGLWWG
Trigger: CCCCCACCAGAGACCTGACATCGGATACGTGCACCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS GCA 72 bp CTGGACATCCAGATGTGCATCTGCTTGGCCACCTGGTaGACGTATCCGATGTCAGGTCTCTGGTGGGGGTCA +
Preference number: 6 (lower is better)
Translates to: LDIQMCICLATW*TYPMSGLWWGS
Trigger: TGACCCCCACCAGAGACCTGACATCGGATACGTGCACCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS GCA 72 bp TCCTGGACTCACCCCGTCACTCCCAGCTCCACAGCCTaGTCCCCCGTGCTGTCTCTAATTCATGTGTCTTCT +
Preference number: 6 (lower is better)
Translates to: SWTHPVTPSSTA*SPVLSLIHVSS
Trigger: AGAAGACACATGAATTAGAGACAGCACGGGGGAGCAGGCTGTGGAGCTGGGAGTGACGGGGTGAGTCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373600.7
ENST00000423785.5
CDS CCA 72 bp CCAGTGGCCTCCATGCAGGGAAAGCTTTCAAGCCCGTaGCCTCCCCTAATTTTCTCTCCTTCCCACAGGCAG +
Preference number: 6 (lower is better)
Translates to: PVASMQGKLSSP*PPLIFSPSHRQ
Trigger: CTGCCTGTGGGAAGGAGAGAAAATTAGGGGAGGCCACGGGCTTGAAAGCTTTCCCTGCATGGAGGCCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539416.5
CDS CAA 72 bp AGAGCCACTGTCTTCCTGTCCAGCAGGCAGGTGGCCTaGTACACCTCGCTGAACTGTCCTCGGCCTATCTTC +
Preference number: 6 (lower is better)
Translates to: RATVFLSSRQVA*YTSLNCPRPIF
Trigger: GAAGATAGGCCGAGGACAGTTCAGCGAGGTGTACAAGGCCACCTGCCTGCTGGACAGGAAGACAGTGGCTCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CAA 72 bp CACGCTCAGGTGCTGGACATCCAGATGTGCATCTGCTaGGCCACCTGGTGCACGTATCCGATGTCAGGTCTC +
Preference number: 6 (lower is better)
Translates to: HAQVLDIQMCIC*ATWCTYPMSGL
Trigger: GAGACCTGACATCGGATACGTGCACCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAGCACCTGAGCGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS GCA 72 bp TTGATGTCTCGGTGCATCACCCGGCGTGAATGCATGTaGTCCACGGCGCTGCACAGCTGCACAAAGTACTTC +
Preference number: 6 (lower is better)
Translates to: LMSRCITRRECM*STALHSCTKYF
Trigger: GAAGTACTTTGTGCAGCTGTGCAGCGCCGTGGAGCACATGCATTCACGCCGGGTGATGCACCGAGACATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000425237.5
ENST00000444973.5
ENST00000454453.5
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS GCA 72 bp ATCCACGCTCAGGTGCTGGACATCCAGATGTGCATCTaGTTGGCCACCTGGTGCACGTATCCGATGTCAGGT +
Preference number: 6 (lower is better)
Translates to: IHAQVLDIQMCI*LATWCTYPMSG
Trigger: ACCTGACATCGGATACGTGCACCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAGCACCTGAGCGTGGAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS GCA 72 bp CTGGCTTTGATAAGGCACGGTGCATCCACGCTCAGGTaGTGGACATCCAGATGTGCATCTGCTTGGCCACCT +
Preference number: 6 (lower is better)
Translates to: LALIRHGASTLR*WTSRCASAWPP
Trigger: AGGTGGCCAAGCAGATGCACATCTGGATGTCCAGCACCTGAGCGTGGATGCACCGTGCCTTATCAAAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CCA 72 bp ACGCTCAGGTGCTGGACATCCAGATGTGCATCTGCTTaGCCACCTGGTGCACGTATCCGATGTCAGGTCTCT +
Preference number: 6 (lower is better)
Translates to: TLRCWTSRCASA*PPGARIRCQVS
Trigger: AGAGACCTGACATCGGATACGTGCACCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAGCACCTGAGCGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CCA 72 bp GCTTTGATAAGGCACGGTGCATCCACGCTCAGGTGCTaGACATCCAGATGTGCATCTGCTTGGCCACCTGGT +
Preference number: 6 (lower is better)
Translates to: ALIRHGASTLRC*TSRCASAWPPG
Trigger: ACCAGGTGGCCAAGCAGATGCACATCTGGATGTCCAGCACCTGAGCGTGGATGCACCGTGCCTTATCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS TCA 72 bp TTGGGTGGTTCAGTTGCTTCAAGAGGCCGATCTCCTTaGCACAGTCCTGCCTCGCCTTGGCGTCCATCATCT +
Preference number: 6 (lower is better)
Translates to: LGGSVASRGRSP*HSPASPWRPSS
Trigger: AGATGATGGACGCCAAGGCGAGGCAGGACTGTGTCAAGGAGATCGGCCTCTTGAAGCAACTGAACCACCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS GCA 72 bp GTAAGGCAAAGTGGTGCTGGCTTTGATAAGGCACGGTaGATCCACGCTCAGGTGCTGGACATCCAGATGTGC +
Preference number: 6 (lower is better)
Translates to: VRQSGAGFDKAR*IHAQVLDIQMC
Trigger: GCACATCTGGATGTCCAGCACCTGAGCGTGGATGCACCGTGCCTTATCAAAGCCAGCACCACTTTGCCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320246.10
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS GCA 72 bp ATATTTGGGTGGTTCAGTTGCTGTGGGTCAGGAGGATaGACAGGCCCCAGGGTGTGGCAGAGGTTGTTGGAA +
Preference number: 6 (lower is better)
Translates to: IFGWFSCCGSGG*TGPRVWQRLLE
Trigger: TTCCAACAACCTCTGCCACACCCTGGGGCCTGTGCATCCTCCTGACCCACAGCAACTGAACCACCCAAATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454453.5
CDS CCA 72 bp TCGCTGAACTGTCCTCGGCCTATCTTCTTTTCGATCTaGAAGTCCGCCAGCGAGCAGCGAAAAGACAGCGTG +
Preference number: 6 (lower is better)
Translates to: SLNCPRPIFFSI*KSASEQRKDSV
Trigger: CACGCTGTCTTTTCGCTGCTCGCTGGCGGACTTCCAGATCGAAAAGAAGATAGGCCGAGGACAGTTCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CAA 90 bp ACCTTCTTCAGAGCCACTGTCTTCCTGTCCAGCAGGCAGGTGGCCTaGTACACCTCGCTGAACTGTCCTCGGCCTATCTTCTTTTCGATC +
Preference number: 6 (lower is better)
Translates to: TFFRATVFLSSRQVA*YTSLNCPRPIFFSI
Trigger: GATCGAAAAGAAGATAGGCCGAGGACAGTTCAGCGAGGTGTACAAGGCCACCTGCCTGCTGGACAGGAAGACAGTGGCTCTGAAGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS TCA 72 bp ACTACAAGCGATCTCGCTGTCAGATATTTAGGACTGTaGGTCAGGCCCGTGAAGGTGACATCAGGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: TTSDLAVRYLGL*VRPVKVTSGGQ
Trigger: CTGGCCCCCTGATGTCACCTTCACGGGCCTGACTCACAGTCCTAAATATCTGACAGCGAGATCGCTTGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425237.5
CDS GCA 72 bp AGTTGCTTCAAGAGGCCGATCTCCTTGACACAGTCCTaGCTCGCCTTGGCGTCCATCATCTCAAAGATCTGC +
Preference number: 6 (lower is better)
Translates to: SCFKRPISLTQS*LALASIISKIC
Trigger: GCAGATCTTTGAGATGATGGACGCCAAGGCGAGGCAGGACTGTGTCAAGGAGATCGGCCTCTTGAAGCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS GCA 72 bp CTTCTTAAAGTACTTGATCATCTGCGAGAGGTCCCCTaGGTCAGCCAACTCCAGCACAATGTTCAGCTCGTT +
Preference number: 6 (lower is better)
Translates to: LLKVLDHLREVP*VSQLQHNVQLV
Trigger: AACGAGCTGAACATTGTGCTGGAGTTGGCTGACGCAGGGGACCTCTCGCAGATGATCAAGTACTTTAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000454453.5
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CAA 90 bp GAGAGGTCCCCTGCGTCAGCCAACTCCAGCACAATGTTCAGCTCGTaGTCTTCGATAAACGAGTCCAAATACTTGATGATATTTGGGTGG +
Preference number: 6 (lower is better)
Translates to: ERSPASANSSTMFSS*SSINESKYLMIFGW
Trigger: CCACCCAAATATCATCAAGTATTTGGACTCGTTTATCGAAGACAACGAGCTGAACATTGTGCTGGAGTTGGCTGACGCAGGGGACCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000454453.5
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CAA 90 bp AGCACAATGTTCAGCTCGTTGTCTTCGATAAACGAGTCCAAATACTaGATGATATTTGGGTGGTTCAGTTGCTGTGGGTCAGGAGGATGC +
Preference number: 6 (lower is better)
Translates to: STMFSSLSSINESKY*MIFGWFSCCGSGGC
Trigger: GCATCCTCCTGACCCACAGCAACTGAACCACCCAAATATCATCAAGTATTTGGACTCGTTTATCGAAGACAACGAGCTGAACATTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454453.5
CDS CCA 72 bp GTCTTCGATAAACGAGTCCAAATACTTGATGATATTTaGGTGGTTCAGTTGCTGTGGGTCAGGAGGATGCAC +
Preference number: 6 (lower is better)
Translates to: VFDKRVQILDDI*VVQLLWVRRMH
Trigger: GTGCATCCTCCTGACCCACAGCAACTGAACCACCCAAATATCATCAAGTATTTGGACTCGTTTATCGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454453.5
CDS CAA 72 bp CCTGCGTCAGCCAACTCCAGCACAATGTTCAGCTCGTaGTCTTCGATAAACGAGTCCAAATACTTGATGATA +
Preference number: 6 (lower is better)
Translates to: PASANSSTMFSS*SSINESKYLMI
Trigger: TATCATCAAGTATTTGGACTCGTTTATCGAAGACAACGAGCTGAACATTGTGCTGGAGTTGGCTGACGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000454453.5
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CAA 90 bp AGCACAATGTTCAGCTCGTTGTCTTCGATAAACGAGTCCAAATACTaGATGATATTTGGGTGGTTCAGTTGCTTCAAGAGGCCGATCTCC +
Preference number: 6 (lower is better)
Translates to: STMFSSLSSINESKY*MIFGWFSCFKRPIS
Trigger: GGAGATCGGCCTCTTGAAGCAACTGAACCACCCAAATATCATCAAGTATTTGGACTCGTTTATCGAAGACAACGAGCTGAACATTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CCA 72 bp GTCTTCGATAAACGAGTCCAAATACTTGATGATATTTaGGTGGTTCAGTTGCTTCAAGAGGCCGATCTCCTT +
Preference number: 6 (lower is better)
Translates to: VFDKRVQILDDI*VVQLLQEADLL
Trigger: AAGGAGATCGGCCTCTTGAAGCAACTGAACCACCCAAATATCATCAAGTATTTGGACTCGTTTATCGAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5
CDS CAA 72 bp TTCAGCTCGTTGTCTTCGATAAACGAGTCCAAATACTaGATGATATTTGGGTGGTTCAGTTGCTGTGGGTCA +
Preference number: 6 (lower is better)
Translates to: FSSLSSINESKY*MIFGWFSCCGS
Trigger: TGACCCACAGCAACTGAACCACCCAAATATCATCAAGTATTTGGACTCGTTTATCGAAGACAACGAGCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454453.5
CDS CAA 72 bp TTCAGCTCGTTGTCTTCGATAAACGAGTCCAAATACTaGATGATATTTGGGTGGTTCAGTTGCTTCAAGAGG +
Preference number: 6 (lower is better)
Translates to: FSSLSSINESKY*MIFGWFSCFKR
Trigger: CCTCTTGAAGCAACTGAACCACCCAAATATCATCAAGTATTTGGACTCGTTTATCGAAGACAACGAGCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320246.10
ENST00000373596.5
ENST00000373600.7
ENST00000373603.5
ENST00000394199.6
ENST00000422297.5
ENST00000423785.5
ENST00000425237.5
ENST00000444973.5
ENST00000447379.1
ENST00000539416.5
ENST00000540326.5
ENST00000545174.5
ENST00000546191.5