RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NEK11 (Homo sapiens)

Ensembl gene IDs: ENSG00000114670

Ensembl transcript IDs: ENST00000356918.8, ENST00000383366.9, ENST00000426022.6, ENST00000506695.5, ENST00000507910.5, ENST00000507967.1, ENST00000508196.5, ENST00000510474.5, ENST00000510688.5, ENST00000510769.5, ENST00000511262.5, ENST00000513550.1, ENST00000514915.5, ENST00000602792.1

Found 750 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGCTAGAGTCCAGTGACCTTCACTGGCAGGCTGCCTACAGTCCATaGGACCCTAGGCAGTCAGGCACTGAGCTCTGTCCTCCAGCTGAA +
Preference number: 1 (lower is better)
Translates to: RLESSDLHWQAAYSP*DPRQSGTELCPPAE
Trigger: TTCAGCTGGAGGACAGAGCTCAGTGCCTGACTGCCTAGGGTCTCATGGACTGTAGGCAGCCTGCCAGTGAAGGTCACTGGACTCTAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
3UTR TCA 90 bp GAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTaGCTCAATCCTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAAT +
Preference number: 1 (lower is better)
Translates to: ENNEEHTASPRSSSG*LNPAGSPEGAHERN
Trigger: ATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
3UTR CCA 90 bp CCTCATGCGTTTCATCTTGGTCCTGGCCATCACACTGTTGAAAATTaGTGGTCCTGGGGACATGTCTTCAGCCATGGTGGTGATGGTCTT +
Preference number: 1 (lower is better)
Translates to: PHAFHLGPGHHTVEN*WSWGHVFSHGGDGL
Trigger: AAGACCATCACCACCATGGCTGAAGACATGTCCCCAGGACCACCAATTTTCAACAGTGTGATGGCCAGGACCAAGATGAAACGCATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR TCA 90 bp TCTTCAAAGTACAGGAGCTGGTCCACTTCAAAACAGTCGCTGGCTTaGGGCACCACTTTTTCCAAACACTCGCGGATCTCTGCTTCGCTA +
Preference number: 1 (lower is better)
Translates to: SSKYRSWSTSKQSLA*GTTFSKHSRISASL
Trigger: TAGCGAAGCAGAGATCCGCGAGTGTTTGGAAAAAGTGGTGCCTCAAGCCAGCGACTGTTTTGAAGTGGACCAGCTCCTGTACTTTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR CCA 90 bp CATGCGTTTCATCTTGGTCCTGGCCATCACACTGTTGAAAATTGGTaGTCCTGGGGACATGTCTTCAGCCATGGTGGTGATGGTCTTTGT +
Preference number: 1 (lower is better)
Translates to: HAFHLGPGHHTVENW*SWGHVFSHGGDGLC
Trigger: ACAAAGACCATCACCACCATGGCTGAAGACATGTCCCCAGGACCACCAATTTTCAACAGTGTGATGGCCAGGACCAAGATGAAACGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR CCA 90 bp ACTGCTCTTCAAAGTACAGGAGCTGGTCCACTTCAAAACAGTCGCTaGCTTGAGGCACCACTTTTTCCAAACACTCGCGGATCTCTGCTT +
Preference number: 1 (lower is better)
Translates to: TALQSTGAGPLQNSR*LEAPLFPNTRGSLL
Trigger: AAGCAGAGATCCGCGAGTGTTTGGAAAAAGTGGTGCCTCAAGCCAGCGACTGTTTTGAAGTGGACCAGCTCCTGTACTTTGAAGAGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR GCA 90 bp GTCGCTGGCTTGAGGCACCACTTTTTCCAAACACTCGCGGATCTCTaGTTCGCTAGCATTCTGATGCCTTGCTCTCTTGAGGTAATTATA +
Preference number: 1 (lower is better)
Translates to: VAGLRHHFFQTLADL*FASILMPCSLEVII
Trigger: TATAATTACCTCAAGAGAGCAAGGCATCAGAATGCTAGCGAAGCAGAGATCCGCGAGTGTTTGGAAAAAGTGGTGCCTCAAGCCAGCGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR TCA 90 bp TGGGATCTCATGGTATCCAAGGTCAGATGTGGCATCCTCTACAATTaGTTCAAGTTCGTGGAGGTCCATGGAAGGAATAGGCTGAGACTC +
Preference number: 1 (lower is better)
Translates to: WDLMVSKVRCGILYN*FKFVEVHGRNRLRL
Trigger: GAGTCTCAGCCTATTCCTTCCATGGACCTCCACGAACTTGAATCAATTGTAGAGGATGCCACATCTGACCTTGGATACCATGAGATCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR GCA 90 bp AGATGGTTCTGGAGAGTAGGTTCTTTTCCCATCGTGATCAGCAACTaGTCTTCAAAGTACAGGAGCTGGTCCACTTCAAAACAGTCGCTG +
Preference number: 1 (lower is better)
Translates to: RWFWRVGSFPIVISN*SSKYRSWSTSKQSL
Trigger: CAGCGACTGTTTTGAAGTGGACCAGCTCCTGTACTTTGAAGAGCAGTTGCTGATCACGATGGGAAAAGAACCTACTCTCCAGAACCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR GCA 90 bp TTCCAAACACTCGCGGATCTCTGCTTCGCTAGCATTCTGATGCCTTaGTCTCTTGAGGTAATTATAGACCTCTTCAAATACTTCTGTCCC +
Preference number: 1 (lower is better)
Translates to: FQTLADLCFASILMP*SLEVIIDLFKYFCP
Trigger: GGGACAGAAGTATTTGAAGAGGTCTATAATTACCTCAAGAGAGCAAGGCATCAGAATGCTAGCGAAGCAGAGATCCGCGAGTGTTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR CCA 90 bp TCAGAGCCTCAGGACTCATATAATGGGGAGTTCCAGTTAAAGTTGTaGCCAGGTCACAGGATCCCATTAGAAGTCGAGAAACTCCAAAAT +
Preference number: 1 (lower is better)
Translates to: SEPQDSYNGEFQLKL*PGHRIPLEVEKLQN
Trigger: ATTTTGGAGTTTCTCGACTTCTAATGGGATCCTGTGACCTGGCCACAACTTTAACTGGAACTCCCCATTATATGAGTCCTGAGGCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510474.5
3UTR CCA 90 bp TCTTTGTGTCTAGAGAAGTGCAACCCAGGACATTTTCCAAACACCTaGCCAACGCTTCGATATCACTGTCCTGTTGGTTTGTTCTGTAAG +
Preference number: 1 (lower is better)
Translates to: SLCLEKCNPGHFPNT*PTLRYHCPVGLFCK
Trigger: CTTACAGAACAAACCAACAGGACAGTGATATCGAAGCGTTGGCCAGGTGTTTGGAAAATGTCCTGGGTTGCACTTCTCTAGACACAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR TCA 90 bp TCTACAATTGATTCAAGTTCGTGGAGGTCCATGGAAGGAATAGGCTaGGACTCAGGCAGGTTCTCTAAAGTTGGTTCATCAGATTCATGG +
Preference number: 1 (lower is better)
Translates to: STIDSSSWRSMEGIG*DSGRFSKVGSSDSW
Trigger: CCATGAATCTGATGAACCAACTTTAGAGAACCTGCCTGAGTCTCAGCCTATTCCTTCCATGGACCTCCACGAACTTGAATCAATTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510474.5
3UTR TCA 90 bp TGTCCTGTTGGTTTGTTCTGTAAGCAGGCTGGGATCCCTCATTCCTaGTTTCTTTCTCTGGTCTTTCTAACGCTATTTCTTCTTCCTCCT +
Preference number: 1 (lower is better)
Translates to: CPVGLFCKQAGIPHS*FLSLVFLTLFLLPP
Trigger: AGGAGGAAGAAGAAATAGCGTTAGAAAGACCAGAGAAAGAAATCAGGAATGAGGGATCCCAGCCTGCTTACAGAACAAACCAACAGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR TCA 90 bp TCTACAATTGATTCAAGTTCGTGGAGGTCCATGGAAGGAATAGGCTaGGACTCAGGCAGGTTCTCTAAAGTTGGTTCATCAGATTCCTCT +
Preference number: 1 (lower is better)
Translates to: STIDSSSWRSMEGIG*DSGRFSKVGSSDSS
Trigger: AGAGGAATCTGATGAACCAACTTTAGAGAACCTGCCTGAGTCTCAGCCTATTCCTTCCATGGACCTCCACGAACTTGAATCAATTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514915.5
3UTR GCA 90 bp TATTTCTTCTTCCTCCTCATCACTCTCTTCACAATAGGAATCAAATaGATCAGCGTAGTACTCTTCAGCCACAAGTGGGTCTTCTGGGAT +
Preference number: 1 (lower is better)
Translates to: YFFFLLITLFTIGIK*ISVVLFSHKWVFWD
Trigger: ATCCCAGAAGACCCACTTGTGGCTGAAGAGTACTACGCTGATGCATTTGATTCCTATTGTGAAGAGAGTGATGAGGAGGAAGAAGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR TCA 90 bp CCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAACTTaGTCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATG +
Preference number: 1 (lower is better)
Translates to: PEGAHERNAFQGSQT*SISLSQGIVQITLM
Trigger: CATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
3UTR GCA 90 bp GGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATaGTTACTACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTG +
Preference number: 1 (lower is better)
Translates to: GYSPNNTYDSKHRQP*LLLSKEASTSDEEL
Trigger: CAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTAGTAAGCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
3UTR GCA 90 bp TTAAAACAATGGATAAGAAATTGGAGCCAGCGAATGCATGATTCATaGAGCACATCTCATACAAAATGCATGCCAGTGACCAGATGTCCG +
Preference number: 1 (lower is better)
Translates to: LKQWIRNWSQRMHDS*STSHTKCMPVTRCP
Trigger: CGGACATCTGGTCACTGGCATGCATTTTGTATGAGATGTGCTGCATGAATCATGCATTCGCTGGCTCCAATTTCTTATCCATTGTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR TCA 90 bp AAAGTTGGTTCATCAGATTCATGGAGTACATCAACACTCAGCTGCTaGAAGTTCCGAGATCTCAATTCTTGCATTCGTTTGCTATTTTCT +
Preference number: 1 (lower is better)
Translates to: KVGSSDSWSTSTLSC*KFRDLNSCIRLLFS
Trigger: AGAAAATAGCAAACGAATGCAAGAATTGAGATCTCGGAACTTTCAGCAGCTGAGTGTTGATGTACTCCATGAATCTGATGAACCAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510474.5
3UTR CCA 90 bp AAGGTGTGTCACCTTCAACAATTTTTAAAACAATGGATAAGAAATTaGAGCCAGCGAATGCATGATTCATGCAGCACATCTCATACAAAA +
Preference number: 1 (lower is better)
Translates to: KVCHLQQFLKQWIRN*SQRMHDSCSTSHTK
Trigger: TTTTGTATGAGATGTGCTGCATGAATCATGCATTCGCTGGCTCCAATTTCTTATCCATTGTTTTAAAAATTGTTGAAGGTGACACACCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR CCA 90 bp AGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGAGCAGCTGGTCAGGATGTaGGTAAGCAGCCAAGGCCTA +
Preference number: 2 (lower is better)
Translates to: RACGAPTGKQSTTTYRSEQLVRM*VSSQGL
Trigger: TAGGCCTTGGCTGCTTACCCACATCCTGACCAGCTG...CTCAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
3UTR-3UTR TCA 90 bp CTTCTGGGCTGTAGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGCGGTCATCGTCAGGGTaGCTCAATCCTGCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: LLGCSSACCRLESSDLHWRSSSG*LNPAGS
Trigger: GCTTCCAGCAGGATTGAGTCACCCTGACGATGACCG...CCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCTACAGCCCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
3UTR-3UTR TCA 90 bp CTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCACGGTCATCGTCAGGGTaGCTCAATCCTGCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: LKIMKSTRLLPGHRQGDSRSSSG*LNPAGS
Trigger: GCTTCCAGCAGGATTGAGTCACCCTGACGATGACCG...TGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
3UTR-3UTR GCA 90 bp GGCAGGTTCTCTAAAGTTGGTTCATCAGATTCCTCTTCCCTGCCTTGCCACCTCCCTTCACTGGCAGGCTaGCTACAGTCCATGAGACCC +
Preference number: 2 (lower is better)
Translates to: GRFSKVGSSDSSSLPCHLPSLAG*LQSMRP
Trigger: GGGTCTCATGGACTGTAGGCAGCCTGCCAGTGAAGG...GAGGTGGCAAGGCAGGGAAGAGGAATCTGATGAACCAACTTTAGAGAACCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514915.5
3UTR-3UTR CCA 90 bp AGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGAGTTCTCCACATCTGAATaGTGGGGTAGGGAGTCATGC +
Preference number: 2 (lower is better)
Translates to: RACGAPTGKQSTTTYRSEFSTSE*WGRESC
Trigger: GCATGACTCCCTACCCCACCATTCAGATGTGGAGAA...CTCAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
3UTR-3UTR CCA 90 bp AGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAATCCTGCTGGAAGTTCCAGTTAAAGTTGTaGCCAGGTCACAGGATCCCA +
Preference number: 2 (lower is better)
Translates to: RAHGFSPVIVRVTQSCWKFQLKL*PGHRIP
Trigger: TGGGATCCTGTGACCTGGCCACAACTTTAACTGGAA...CTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510474.5
3UTR CAA 90 bp CTTTCTCATCAGCCGCCTGGAGCTTCCTCAGCCGCATCCTTTCTCTaGGCGTCATTTTCTGTACTTCTGACAGTGCCCTCAGAGTCTGCA +
Preference number: 2 (lower is better)
Translates to: LSHQPPGASSAASFL*ASFSVLLTVPSESA
Trigger: TGCAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATGACGCCAAGAGAAAGGATGCGGCTGAGGAAGCTCCAGGCGGCTGATGAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR TCA 90 bp GTAAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGGCTGAACAGGAAATaGAGAGGTGACAGCTGGTCA +
Preference number: 2 (lower is better)
Translates to: VKGMWGSYRQAKHNHLQVWLNRK*RGDSWS
Trigger: TGACCAGCTGTCACCTCTTCATTTCCTGTTCAGCCA...GACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
3UTR-3UTR TCA 90 bp AAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGGAGCATTGGGCTCAGTaGTTGCTTAAAGAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: KGHVGLLQASKAQPPTGLEHWAQ*LLKEWL
Trigger: CAGCCACTCTTTAAGCAATCACTGAGCCCAATGCTC...CAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
3UTR CAA 90 bp GCTGATTCCCTCATGCGTTTCATCTTGGTCCTGGCCATCACACTGTaGAAAATTGGTGGTCCTGGGGACATGTCTTCAGCCATGGTGGTG +
Preference number: 2 (lower is better)
Translates to: ADSLMRFILVLAITL*KIGGPGDMSSAMVV
Trigger: CACCACCATGGCTGAAGACATGTCCCCAGGACCACCAATTTTCAACAGTGTGATGGCCAGGACCAAGATGAAACGCATGAGGGAATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR CCA 90 bp ATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCTCCTACAGGTCCACATCTGAATGGTaGGGTAGGGAGTCATGCTCC +
Preference number: 2 (lower is better)
Translates to: IVSHRQPRTVKGMWGSYRSTSEW*GRESCS
Trigger: GGAGCATGACTCCCTACCCCACCATTCAGATGTGGA...CCTGTAGGAGCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
3UTR CAA 90 bp CTCTTCAAAGTACAGGAGCTGGTCCACTTCAAAACAGTCGCTGGCTaGAGGCACCACTTTTTCCAAACACTCGCGGATCTCTGCTTCGCT +
Preference number: 2 (lower is better)
Translates to: LFKVQELVHFKTVAG*RHHFFQTLADLCFA
Trigger: AGCGAAGCAGAGATCCGCGAGTGTTTGGAAAAAGTGGTGCCTCAAGCCAGCGACTGTTTTGAAGTGGACCAGCTCCTGTACTTTGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR TCA 90 bp CCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGCTTCTGATGAGGAATTaGAAGTCAAGATGGGAGCTC +
Preference number: 2 (lower is better)
Translates to: PPAENNEEHTASPRSSSGLLMRN*KSRWEL
Trigger: GAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAG...CCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
3UTR-3UTR CCA 90 bp AGTCGCTGGCTTGAGGCACCACTTTTTCCAAACACTCGCGGATCTCTGCTTCGCATTGATTCAAGTTCGTaGAGGTCCATGGAAGGAATA +
Preference number: 2 (lower is better)
Translates to: SRWLEAPLFPNTRGSLLRIDSSS*RSMEGI
Trigger: TATTCCTTCCATGGACCTCCACGAACTTGAATCAAT...GCGAAGCAGAGATCCGCGAGTGTTTGGAAAAAGTGGTGCCTCAAGCCAGCGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR CCA 90 bp ATCACTGTCCTGTTGGTTTGTTCTGTAAGCAGGCTGGGATCCCTCATTCCTGATCTCTTCAGCCACAAGTaGGTCTTCTGGGATCTCATG +
Preference number: 2 (lower is better)
Translates to: ITVLLVCSVSRLGSLIPDLFSHK*VFWDLM
Trigger: CATGAGATCCCAGAAGACCCACTTGTGGCTGAAGAG...ATCAGGAATGAGGGATCCCAGCCTGCTTACAGAACAAACCAACAGGACAGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR TCA 90 bp AAAGTACAGGAGCTGGTCCACTTCAAAACAGTCGCTGGCTTGAGGCACCACTTTCTTCTGATGAGGAATTaGAAGTCAAGATGGGAGCTC +
Preference number: 2 (lower is better)
Translates to: KVQELVHFKTVAGLRHHFLLMRN*KSRWEL
Trigger: GAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAG...AAAGTGGTGCCTCAAGCCAGCGACTGTTTTGAAGTGGACCAGCTCCTGTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR TCA 90 bp GAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATACGGTCATCGTCAGGGTaGCTCAATCCTGCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: EELKVKMGALLLYPFPIIRSSSG*LNPAGS
Trigger: GCTTCCAGCAGGATTGAGTCACCCTGACGATGACCG...TATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
3UTR-3UTR TCA 90 bp ATTTGTCCACTTGAACTTCTGCTTCTTTTTGATAGTTGCCTAGAGATGGTTCTGGCTGCCTACAGTCCATaGGACCCTAGGCAGTCAGGC +
Preference number: 2 (lower is better)
Translates to: ICPLELLLLFDSCLEMVLAAYSP*DPRQSG
Trigger: GCCTGACTGCCTAGGGTCTCATGGACTGTAGGCAGC...CAGAACCATCTCTAGGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGGACAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
3UTR-3UTR GCA 90 bp CTCTGTCCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGAAGCATAGGCAGCCATaGTTACTACTCTCTAAAGAA +
Preference number: 2 (lower is better)
Translates to: LCPPAENNEEHTASPRSSKHRQP*LLLSKE
Trigger: TTCTTTAGAGAGTAGTAAGCATGGCTGCCTATGCTT...CGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGGACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
3UTR-3UTR GCA 90 bp CTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAAAAGCATAGGCAGCCATaGTTACTACTCTCTAAAGAA +
Preference number: 2 (lower is better)
Translates to: LLEALRAHMREMLFKGAKKHRQP*LLLSKE
Trigger: TTCTTTAGAGAGTAGTAAGCATGGCTGCCTATGCTT...TTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
3UTR-3UTR GCA 90 bp TCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCTCTGTCCCCAGCTTCTaGATGGCTGATTCCCTCATG +
Preference number: 2 (lower is better)
Translates to: SDEELKVKMGALLLYPFPSVPSF*MADSLM
Trigger: CATGAGGGAATCAGCCATGCAGAAGCTGGGGACAGA...GGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR CCA 90 bp AGGCATGTCTGGCTTCTGGGCTGTAGCTCAGCATGTTGTAGGCTAGAGTCCAGTCAATGGATAAGAAATTaGAGCCAGCGAATGCATGAT +
Preference number: 2 (lower is better)
Translates to: RHVWLLGCSSACCRLESSQWIRN*SQRMHD
Trigger: ATCATGCATTCGCTGGCTCCAATTTCTTATCCATTG...ACTGGACTCTAGCCTACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR CAA 90 bp GTTTCAGAGCCTCAGGACTCATATAATGGGGAGTTCCAGTTAAAGTaGTGGCCAGGTCACAGGATCCCATTAGAAGTCGAGAAACTCCAA +
Preference number: 2 (lower is better)
Translates to: VSEPQDSYNGEFQLK*WPGHRIPLEVEKLQ
Trigger: TTGGAGTTTCTCGACTTCTAATGGGATCCTGTGACCTGGCCACAACTTTAACTGGAACTCCCCATTATATGAGTCCTGAGGCTCTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510474.5
3UTR-3UTR TCA 90 bp GTTCATCAGATTCATGGAGTACATCAACACTCAGCTGCTGAAAGTTCCGAGATCGAGCCAGCGAATGCATaGTTCATGCAGCACATCTCA +
Preference number: 2 (lower is better)
Translates to: VHQIHGVHQHSAAESSEIEPANA*FMQHIS
Trigger: TGAGATGTGCTGCATGAATCATGCATTCGCTGGCTC...GATCTCGGAACTTTCAGCAGCTGAGTGTTGATGTACTCCATGAATCTGATGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510474.5
3UTR-3UTR TCA 90 bp GTGTGTATGAAATACACACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGCGGTCATCGTCAGGGTaGCTCAATCCTGCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: VCMKYTHIFLISHGRAKVRSSSG*LNPAGS
Trigger: GCTTCCAGCAGGATTGAGTCACCCTGACGATGACCG...CACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTGTGTATTTCATACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
3UTR-3UTR TCA 90 bp GTTCATCAGATTCATGGAGTACATCAACACTCAGCTGCTGAAAGTTCCGAGATCCATTTTCTGTACTTCTaGCAGTGCCCTCAGAGTCTG +
Preference number: 2 (lower is better)
Translates to: VHQIHGVHQHSAAESSEIHFLYF*QCPQSL
Trigger: CAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATG...GATCTCGGAACTTTCAGCAGCTGAGTGTTGATGTACTCCATGAATCTGATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510474.5
3UTR-3UTR GCA 90 bp GGCGTCATTTTCTGTACTTCTGACAGTGCCCTCAGAGTCTGCAGGTGGATCCTTCGAATGCATGATTCATaGAGCACATCTCATACAAAA +
Preference number: 2 (lower is better)
Translates to: GVIFCTSDSALRVCRWILRMHDS*STSHTK
Trigger: TTTTGTATGAGATGTGCTGCATGAATCATGCATTCG...AAGGATCCACCTGCAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATGACGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR CCA 90 bp CTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTCAGCTGGTCAGGATGTaGGTAAGCAGCCAAGGCCTA +
Preference number: 2 (lower is better)
Translates to: LGHLKRRGDIVSHRQPRTQLVRM*VSSQGL
Trigger: TAGGCCTTGGCTGCTTACCCACATCCTGACCAGCTG...AGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
3UTR-3UTR CCA 90 bp GGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGGCATGTCTGGCTTCTaGGCTGTAGCTCAGCATGTT +
Preference number: 2 (lower is better)
Translates to: GIESQDGSSAFVSIPHNRGMSGF*AVAQHV
Trigger: AACATGCTGAGCTACAGCCCAGAAGCCAGACATGCC...TCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
3UTR-3UTR CCA 90 bp ATCACTGTCCTGTTGGTTTGTTCTGTAAGCAGGCTGGGATCCCTCATTCCTGATGGTTCATCAGATTCATaGAGTACATCAACACTCAGC +
Preference number: 2 (lower is better)
Translates to: ITVLLVCSVSRLGSLIPDGSSDS*STSTLS
Trigger: GCTGAGTGTTGATGTACTCCATGAATCTGATGAACC...ATCAGGAATGAGGGATCCCAGCCTGCTTACAGAACAAACCAACAGGACAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510474.5
3UTR-3UTR CCA 90 bp GAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATATCCCCAGCTTCTGCATaGCTGATTCCCTCATGCGTT +
Preference number: 2 (lower is better)
Translates to: EELKVKMGALLLYPFPIISPASA*LIPSCV
Trigger: AACGCATGAGGGAATCAGCCATGCAGAAGCTGGGGA...TATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR TCA 90 bp TCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCTCAACACTCAGCTGCTaGAAGTTCCGAGATCTCAAT +
Preference number: 2 (lower is better)
Translates to: SDEELKVKMGALLLYPFPSTLSC*KFRDLN
Trigger: ATTGAGATCTCGGAACTTTCAGCAGCTGAGTGTTGA...GGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR CCA 90 bp ATTTGTCCACTTGAACTTCTGCTTCTTTTTGATAGTTGCCTAGAGATGGTTCTGTCCCCAGCTTCTGCATaGCTGATTCCCTCATGCGTT +
Preference number: 2 (lower is better)
Translates to: ICPLELLLLFDSCLEMVLSPASA*LIPSCV
Trigger: AACGCATGAGGGAATCAGCCATGCAGAAGCTGGGGA...CAGAACCATCTCTAGGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGGACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR TCA 90 bp CATGGTATCCAAGGTCAGATGTGGCATCCTCTACAATTGATTCAAGTTCGTGGACAAGGGAGCCAAACTTaGTCTATAAGCTTATCTCAG +
Preference number: 2 (lower is better)
Translates to: HGIQGQMWHPLQLIQVRGQGSQT*SISLSQ
Trigger: CTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTG...TCCACGAACTTGAATCAATTGTAGAGGATGCCACATCTGACCTTGGATACCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR TCA 90 bp TCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCCAAGGGAGCCAAACTTaGTCTATAAGCTTATCTCAG +
Preference number: 2 (lower is better)
Translates to: SDEELKVKMGALLLYPFPQGSQT*SISLSQ
Trigger: CTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTG...GGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
3UTR-3UTR TCA 90 bp ATTTGTCCACTTGAACTTCTGCTTCTTTTTGATAGTTGCCTAGAGATGGTTCTGCTTCAGCCATGGTGGTaGTGGTCTTTGTGTCTAGAG +
Preference number: 2 (lower is better)
Translates to: ICPLELLLLFDSCLEMVLLQPWW*WSLCLE
Trigger: CTCTAGACACAAAGACCATCACCACCATGGCTGAAG...CAGAACCATCTCTAGGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGGACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR GCA 90 bp TGCTTCGCTAGCATTCTGATGCCTTGCTCTCTTGAGGTAATTATAGACCTCTTCTTGTGTCTAGAGAAGTaGAACCCAGGACATTTTCCA +
Preference number: 2 (lower is better)
Translates to: CFASILMPCSLEVIIDLFLCLEK*NPGHFP
Trigger: TGGAAAATGTCCTGGGTTGCACTTCTCTAGACACAA...GAAGAGGTCTATAATTACCTCAAGAGAGCAAGGCATCAGAATGCTAGCGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR CCA 90 bp ACTCTCTTCACAATAGGAATCAAATGCATCAGCGTAGTACTCTTCAGCCACAAGATGGAAGGGCAAAAGTaGACCAAAAACAGGTCAGCT +
Preference number: 2 (lower is better)
Translates to: TLFTIGIKCISVVLFSHKMEGQK*TKNRSA
Trigger: AGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCAT...CTTGTGGCTGAAGAGTACTACGCTGATGCATTTGATTCCTATTGTGAAGAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514915.5
3UTR CAA 90 bp CCATGCTTACTACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATaGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATA +
Preference number: 2 (lower is better)
Translates to: PCLLLSKEASTSDEE*KVKMGALLLYPFPI
Trigger: TATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTAGTAAGCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
3UTR-3UTR GCA 90 bp CATGGTATCCAAGGTCAGATGTGGCATCCTCTACAATTGATTCAAGTTCGTGGAACATCTCATACAAAATaGATGCCAGTGACCAGATGT +
Preference number: 2 (lower is better)
Translates to: HGIQGQMWHPLQLIQVRGTSHTK*MPVTRC
Trigger: ACATCTGGTCACTGGCATGCATTTTGTATGAGATGT...TCCACGAACTTGAATCAATTGTAGAGGATGCCACATCTGACCTTGGATACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR CCA 90 bp CATGGTATCCAAGGTCAGATGTGGCATCCTCTACAATTGATTCAAGTTCGTGGACAATGGATAAGAAATTaGAGCCAGCGAATGCATGAT +
Preference number: 2 (lower is better)
Translates to: HGIQGQMWHPLQLIQVRGQWIRN*SQRMHD
Trigger: ATCATGCATTCGCTGGCTCCAATTTCTTATCCATTG...TCCACGAACTTGAATCAATTGTAGAGGATGCCACATCTGACCTTGGATACCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR TCA 90 bp GAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATACAAGGGAGCCAAACTTaGTCTATAAGCTTATCTCAG +
Preference number: 2 (lower is better)
Translates to: EELKVKMGALLLYPFPIIQGSQT*SISLSQ
Trigger: CTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTG...TATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
3UTR-3UTR TCA 90 bp TCAGCTGCTGAAAGTTCCGAGATCTCAATTCTTGCATTCGTTTGCTATTTTCTTGACTTTAAGTCTCGATaGAGTATCCTCCTCTCATGC +
Preference number: 2 (lower is better)
Translates to: SAAESSEISILAFVCYFLDFKSR*SILLSC
Trigger: GCATGAGAGGAGGATACTTCATCGAGACTTAAAGTC...AAGAAAATAGCAAACGAATGCAAGAATTGAGATCTCGGAACTTTCAGCAGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510474.5
3UTR-3UTR GCA 90 bp CATCACTCTCTTCACAATAGGAATCAAATGCATCAGCGTAGTACTCTTCAGCCAACATCTCATACAAAATaGATGCCAGTGACCAGATGT +
Preference number: 2 (lower is better)
Translates to: HHSLHNRNQMHQRSTLQPTSHTK*MPVTRC
Trigger: ACATCTGGTCACTGGCATGCATTTTGTATGAGATGT...TGGCTGAAGAGTACTACGCTGATGCATTTGATTCCTATTGTGAAGAGAGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR CCA 90 bp ATTTGTCCACTTGAACTTCTGCTTCTTTTTGATAGTTGCCTAGAGATGGTTCTGTCTTCTGGGATCTCATaGTATCCAAGGTCAGATGTG +
Preference number: 2 (lower is better)
Translates to: ICPLELLLLFDSCLEMVLSSGIS*YPRSDV
Trigger: CACATCTGACCTTGGATACCATGAGATCCCAGAAGA...CAGAACCATCTCTAGGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGGACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR GCA 90 bp GAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAAAGCATAGGCAGCCATaGTTACTACTCTCTAAAGAA +
Preference number: 2 (lower is better)
Translates to: EELKVKMGALLLYPFPIIKHRQP*LLLSKE
Trigger: TTCTTTAGAGAGTAGTAAGCATGGCTGCCTATGCTT...TATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
3UTR-3UTR GCA 90 bp ACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCTTCTTTTTGATAGTTaGCTAGAGATGGTTCTGGAG +
Preference number: 2 (lower is better)
Translates to: TSDEELKVKMGALLLYPFLLFDS*LEMVLE
Trigger: CTCCAGAACCATCTCTAGGCAACTATCAAAAAGAAG...GAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
3UTR-3UTR TCA 90 bp ATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATCTTCTGATGAGGAATTaGAAGTCAAGATGGGAGCTC +
Preference number: 2 (lower is better)
Translates to: IYKLISGYSPNNTYDSKHLLMRN*KSRWEL
Trigger: GAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAG...ATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
3UTR-3UTR GCA 90 bp TACACACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGCGAATGCATGATTCATaGAGCACATCTCATACAAAA +
Preference number: 2 (lower is better)
Translates to: YTHIFLISHGRAKVDQKQRMHDS*STSHTK
Trigger: TTTTGTATGAGATGTGCTGCATGAATCATGCATTCG...CTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTGTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514915.5
3UTR-3UTR GCA 90 bp TCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAAAGCATAGGCAGCCATaGTTACTACTCTCTAAAGAA +
Preference number: 2 (lower is better)
Translates to: SISLSQGIVQITLMTPSIKHRQP*LLLSKE
Trigger: TTCTTTAGAGAGTAGTAAGCATGGCTGCCTATGCTT...TATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
3UTR TCA 72 bp GAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTaGCTCAATCCTGCTGGAAGCCCTGAGGGCGCACAT +
Preference number: 3 (lower is better)
Translates to: EEHTASPRSSSG*LNPAGSPEGAH
Trigger: ATGTGCGCCCTCAGGGCTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
3UTR TCA 72 bp TCCAGTGACCTTCACTGGCAGGCTGCCTACAGTCCATaGGACCCTAGGCAGTCAGGCACTGAGCTCTGTCCT +
Preference number: 3 (lower is better)
Translates to: SSDLHWQAAYSP*DPRQSGTELCP
Trigger: AGGACAGAGCTCAGTGCCTGACTGCCTAGGGTCTCATGGACTGTAGGCAGCCTGCCAGTGAAGGTCACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
3UTR TCA 72 bp TACAGGAGCTGGTCCACTTCAAAACAGTCGCTGGCTTaGGGCACCACTTTTTCCAAACACTCGCGGATCTCT +
Preference number: 3 (lower is better)
Translates to: YRSWSTSKQSLA*GTTFSKHSRIS
Trigger: AGAGATCCGCGAGTGTTTGGAAAAAGTGGTGCCTCAAGCCAGCGACTGTTTTGAAGTGGACCAGCTCCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR CCA 72 bp GTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTaGGGCTCCTACAGGCAAGCAAAGCACAACCACCTA +
Preference number: 3 (lower is better)
Translates to: VSHRQPRTVKGM*GSYRQAKHNHL
Trigger: TAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
3UTR CCA 72 bp CAAAGTACAGGAGCTGGTCCACTTCAAAACAGTCGCTaGCTTGAGGCACCACTTTTTCCAAACACTCGCGGA +
Preference number: 3 (lower is better)
Translates to: QSTGAGPLQNSR*LEAPLFPNTRG
Trigger: TCCGCGAGTGTTTGGAAAAAGTGGTGCCTCAAGCCAGCGACTGTTTTGAAGTGGACCAGCTCCTGTACTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR CAA 90 bp AGTCGCTGGCTTGAGGCACCACTTTTTCCAAACACTCGCGGATCTCTGCTTCGCATGGGAGCTCTGCTTTaGTATCCATTCCCCATAATA +
Preference number: 3 (lower is better)
Translates to: SRWLEAPLFPNTRGSLLRMGALL*YPFPII
Trigger: TATTATGGGGAATGGATACAAAAGCAGAGCTCCCAT...GCGAAGCAGAGATCCGCGAGTGTTTGGAAAAAGTGGTGCCTCAAGCCAGCGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR TCA 72 bp CCGCATCCTTTCTCTTGGCGTCATTTTCTGTACTTCTaGCAGTGCCCTCAGAGTCTGCAGGTGGATCCTTTT +
Preference number: 3 (lower is better)
Translates to: PHPFSWRHFLYF*QCPQSLQVDPF
Trigger: AAAAGGATCCACCTGCAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATGACGCCAAGAGAAAGGATGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR GCA 72 bp TTGAGGCACCACTTTTTCCAAACACTCGCGGATCTCTaGTTCGCTAGCATTCTGATGCCTTGCTCTCTTGAG +
Preference number: 3 (lower is better)
Translates to: LRHHFFQTLADL*FASILMPCSLE
Trigger: CTCAAGAGAGCAAGGCATCAGAATGCTAGCGAAGCAGAGATCCGCGAGTGTTTGGAAAAAGTGGTGCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR CAA 90 bp TCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGCAGGCTGCCTACAGTATGGGAGCTCTGCTTTaGTATCCATTCCCCATAATA +
Preference number: 3 (lower is better)
Translates to: SACCRLESSDLHWQAAYSMGALL*YPFPII
Trigger: TATTATGGGGAATGGATACAAAAGCAGAGCTCCCAT...ACTGTAGGCAGCCTGCCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
3UTR CCA 72 bp CTAGAGAAGTGCAACCCAGGACATTTTCCAAACACCTaGCCAACGCTTCGATATCACTGTCCTGTTGGTTTG +
Preference number: 3 (lower is better)
Translates to: LEKCNPGHFPNT*PTLRYHCPVGL
Trigger: CAAACCAACAGGACAGTGATATCGAAGCGTTGGCCAGGTGTTTGGAAAATGTCCTGGGTTGCACTTCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR CAA 90 bp GACTCAATCCTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGATGGGAGCTCTGCTTTaGTATCCATTCCCCATAATA +
Preference number: 3 (lower is better)
Translates to: DSILLEALRAHMREMLFKMGALL*YPFPII
Trigger: TATTATGGGGAATGGATACAAAAGCAGAGCTCCCAT...CTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAGGATTGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
3UTR-3UTR CAA 90 bp GAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCTGGCATTTAGTTCTTTaGGATATCTCTCAGGGAGAG +
Preference number: 3 (lower is better)
Translates to: EGQKWTKNRSAKTGMSGFWHLVL*DISQGE
Trigger: CTCTCCCTGAGAGATATCCAAAAGAACTAAATGCCA...GAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR TCA 72 bp GATTCAAGTTCGTGGAGGTCCATGGAAGGAATAGGCTaGGACTCAGGCAGGTTCTCTAAAGTTGGTTCATCA +
Preference number: 3 (lower is better)
Translates to: DSSSWRSMEGIG*DSGRFSKVGSS
Trigger: TGATGAACCAACTTTAGAGAACCTGCCTGAGTCTCAGCCTATTCCTTCCATGGACCTCCACGAACTTGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR CCA 72 bp GGTCTTCTGGGATCTCATGGTATCCAAGGTCAGATGTaGCATCCTCTACAATTGATTCAAGTTCGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: GLLGSHGIQGQM*HPLQLIQVRGG
Trigger: ACCTCCACGAACTTGAATCAATTGTAGAGGATGCCACATCTGACCTTGGATACCATGAGATCCCAGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR CCA 72 bp ATCAAATGCATCAGCGTAGTACTCTTCAGCCACAAGTaGGTCTTCTGGGATCTCATGGTATCCAAGGTCAGA +
Preference number: 3 (lower is better)
Translates to: IKCISVVLFSHK*VFWDLMVSKVR
Trigger: TCTGACCTTGGATACCATGAGATCCCAGAAGACCCACTTGTGGCTGAAGAGTACTACGCTGATGCATTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR CAA 90 bp AAAGTACAGGAGCTGGTCCACTTCAAAACAGTCGCTGGCTTGAGGCACCACTTTTCAAGGGAGCCAAACTaGATCTATAAGCTTATCTCA +
Preference number: 3 (lower is better)
Translates to: KVQELVHFKTVAGLRHHFSREPN*IYKLIS
Trigger: TGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTGA...AAAGTGGTGCCTCAAGCCAGCGACTGTTTTGAAGTGGACCAGCTCCTGTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR TCA 72 bp ATGGTATCCAAGGTCAGATGTGGCATCCTCTACAATTaGTTCAAGTTCGTGGAGGTCCATGGAAGGAATAGG +
Preference number: 3 (lower is better)
Translates to: MVSKVRCGILYN*FKFVEVHGRNR
Trigger: CCTATTCCTTCCATGGACCTCCACGAACTTGAATCAATTGTAGAGGATGCCACATCTGACCTTGGATACCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR GCA 72 bp CTCGCGGATCTCTGCTTCGCTAGCATTCTGATGCCTTaGTCTCTTGAGGTAATTATAGACCTCTTCAAATAC +
Preference number: 3 (lower is better)
Translates to: LADLCFASILMP*SLEVIIDLFKY
Trigger: GTATTTGAAGAGGTCTATAATTACCTCAAGAGAGCAAGGCATCAGAATGCTAGCGAAGCAGAGATCCGCGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR GCA 72 bp TGGAGAGTAGGTTCTTTTCCCATCGTGATCAGCAACTaGTCTTCAAAGTACAGGAGCTGGTCCACTTCAAAA +
Preference number: 3 (lower is better)
Translates to: WRVGSFPIVISN*SSKYRSWSTSK
Trigger: TTTTGAAGTGGACCAGCTCCTGTACTTTGAAGAGCAGTTGCTGATCACGATGGGAAAAGAACCTACTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR CCA 72 bp CAGGACTCATATAATGGGGAGTTCCAGTTAAAGTTGTaGCCAGGTCACAGGATCCCATTAGAAGTCGAGAAA +
Preference number: 3 (lower is better)
Translates to: QDSYNGEFQLKL*PGHRIPLEVEK
Trigger: TTTCTCGACTTCTAATGGGATCCTGTGACCTGGCCACAACTTTAACTGGAACTCCCCATTATATGAGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510474.5
3UTR-3UTR CAA 90 bp ACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCTTTGTGTCATAGCCTaGGTGTTTCAGAGCCTCAGG +
Preference number: 3 (lower is better)
Translates to: TSDEELKVKMGALLLYPFLCVIA*VFQSLR
Trigger: CCTGAGGCTCTGAAACACCAAGGCTATGACACAAAG...GAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR GCA 72 bp TGGATAAGAAATTGGAGCCAGCGAATGCATGATTCATaGAGCACATCTCATACAAAATGCATGCCAGTGACC +
Preference number: 3 (lower is better)
Translates to: WIRNWSQRMHDS*STSHTKCMPVT
Trigger: GGTCACTGGCATGCATTTTGTATGAGATGTGCTGCATGAATCATGCATTCGCTGGCTCCAATTTCTTATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR CAA 90 bp CACTCAGCTGCTGAAAGTTCCGAGATCTCAATTCTTGCATTCGTTTGCTATTTTACCAGATGTCCGACTTaGTGTCATAGCCTTGGTGTT +
Preference number: 3 (lower is better)
Translates to: HSAAESSEISILAFVCYFTRCPT*CHSLGV
Trigger: AACACCAAGGCTATGACACAAAGTCGGACATCTGGT...AAAATAGCAAACGAATGCAAGAATTGAGATCTCGGAACTTTCAGCAGCTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR TCA 72 bp GGTTTGTTCTGTAAGCAGGCTGGGATCCCTCATTCCTaGTTTCTTTCTCTGGTCTTTCTAACGCTATTTCTT +
Preference number: 3 (lower is better)
Translates to: GLFCKQAGIPHS*FLSLVFLTLFL
Trigger: AAGAAATAGCGTTAGAAAGACCAGAGAAAGAAATCAGGAATGAGGGATCCCAGCCTGCTTACAGAACAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR CCA 72 bp CACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTaGACCAAAAACAGGTCAGCTAAGACAGGCATGTCT +
Preference number: 3 (lower is better)
Translates to: HISSLLVMEGQK*TKNRSAKTGMS
Trigger: AGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
3UTR-3UTR CAA 90 bp CTGGGATCTCATGGTATCCAAGGTCAGATGTGGCATCCTCTACAATTGATTCAACCGAGATCTCAATTCTaGCATTCGTTTGCTATTTTC +
Preference number: 3 (lower is better)
Translates to: LGSHGIQGQMWHPLQLIQPRSQF*HSFAIF
Trigger: GAAAATAGCAAACGAATGCAAGAATTGAGATCTCGG...TTGAATCAATTGTAGAGGATGCCACATCTGACCTTGGATACCATGAGATCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR TCA 72 bp TCATCAGATTCATGGAGTACATCAACACTCAGCTGCTaGAAGTTCCGAGATCTCAATTCTTGCATTCGTTTG +
Preference number: 3 (lower is better)
Translates to: SSDSWSTSTLSC*KFRDLNSCIRL
Trigger: CAAACGAATGCAAGAATTGAGATCTCGGAACTTTCAGCAGCTGAGTGTTGATGTACTCCATGAATCTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510474.5
3UTR GCA 72 bp CCAAATAACACTTATGACTCCAAGCATAGGCAGCCATaGTTACTACTCTCTAAAGAAGCCAGTACTTCTGAT +
Preference number: 3 (lower is better)
Translates to: PNNTYDSKHRQP*LLLSKEASTSD
Trigger: ATCAGAAGTACTGGCTTCTTTAGAGAGTAGTAAGCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
3UTR-3UTR CAA 90 bp ACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCATGGGAGCTCTGCTTTaGTATCCATTCCCCATAATA +
Preference number: 3 (lower is better)
Translates to: TSDEELKVKMGALLLYPFMGALL*YPFPII
Trigger: TATTATGGGGAATGGATACAAAAGCAGAGCTCCCAT...GAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
3UTR-3UTR CAA 90 bp CATCACTCTCTTCACAATAGGAATCAAATGCATCAGCGTAGTACTCTTCAGCCACTTAATGAAGGATTCTaGTTCAACATGCTTTCCATG +
Preference number: 3 (lower is better)
Translates to: HHSLHNRNQMHQRSTLQPLNEGF*FNMLSM
Trigger: CATGGAAAGCATGTTGAACAAGAATCCTTCATTAAG...TGGCTGAAGAGTACTACGCTGATGCATTTGATTCCTATTGTGAAGAGAGTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR TCA 72 bp TACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTaGAAGTCAAGATGGGAGCTCTGCTTTTGTATCCAT +
Preference number: 3 (lower is better)
Translates to: YSLKKPVLLMRN*KSRWELCFCIH
Trigger: ATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
3UTR TCA 72 bp AAAACAATGGATAAGAAATTGGAGCCAGCGAATGCATaGTTCATGCAGCACATCTCATACAAAATGCATGCC +
Preference number: 3 (lower is better)
Translates to: KTMDKKLEPANA*FMQHISYKMHA
Trigger: GGCATGCATTTTGTATGAGATGTGCTGCATGAATCATGCATTCGCTGGCTCCAATTTCTTATCCATTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR-3UTR CAA 90 bp GGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGACAGGTGGATCCTTTTTaGCATGGCATTAATTATATG +
Preference number: 3 (lower is better)
Translates to: GIESQDGSSAFVSIPHNRQVDPF*HGINYM
Trigger: CATATAATTAATGCCATGCAAAAAAGGATCCACCTG...TCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
3UTR TCA 72 bp GCACATGAGAGAAATGCTTTTCAAGGGAGCCAAACTTaGTCTATAAGCTTATCTCAGGGTATAGTCCAAATA +
Preference number: 3 (lower is better)
Translates to: AHERNAFQGSQT*SISLSQGIVQI
Trigger: TATTTGGACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAATCCTGCTGGAAGCCGCTGCCTACAGTCCATaGGACCCTAGGCAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: STRLLPGHRQGDSILLEAAAYSP*DPRQSG
Trigger: GCCTGACTGCCTAGGGTCTCATGGACTGTAGGCAGC...GGCTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp ATCCTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAGCGGCGCCCGGGGCTaGCCAAGTCTTGCGGGTAAT +
Preference number: 4 (lower is better)
Translates to: ILLEALRAHMREMLFKGASGARG*PSLAGN
Trigger: ATTACCCGCAAGACTTGGGCAGCCCCGGGCGCCGCT...GGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAATCCTGCTGGAAGCCCCTTCACTGGCAGGCTaGCTACAGTCCATGAGACCC +
Preference number: 4 (lower is better)
Translates to: STRLLPGHRQGDSILLEAPSLAG*LQSMRP
Trigger: GGGTCTCATGGACTGTAGGCAGCCTGCCAGTGAAGG...GGCTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TGTAAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTTTCCTTTCCCTGTCGTaGTCGGAGCGGCGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: CKGHVGLLQASKAQPPTGFLSLS*SERRPG
Trigger: CCCCGGGCGCCGCTCCGACCACGACAGGGAAAGGAA...ACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511262.5
CDS-3UTR GCA 90 bp CTTCTGGGCTGTAGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGAGCGGCGCCCGGGGCTaGCCAAGTCTTGCGGGTAAT +
Preference number: 4 (lower is better)
Translates to: LLGCSSACCRLESSDLHWSGARG*PSLAGN
Trigger: ATTACCCGCAAGACTTGGGCAGCCCCGGGCGCCGCT...CCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCTACAGCCCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp GACTCAATCCTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGTTCCTTTCCCTGTCGTaGTCGGAGCGGCGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: DSILLEALRAHMREMLFKFLSLS*SERRPG
Trigger: CCCCGGGCGCCGCTCCGACCACGACAGGGAAAGGAA...CTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAGGATTGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp GGCGTCATTTTCTGTACTTCTGACAGTGCCCTCAGAGTCTGCAGGTGGATCCTTTTCCTTTCCCTGTCGTaGTCGGAGCGGCGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GVIFCTSDSALRVCRWILFLSLS*SERRPG
Trigger: CCCCGGGCGCCGCTCCGACCACGACAGGGAAAGGAA...AAGGATCCACCTGCAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATGACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGGCTGCCTACAGTCCATaGGACCCTAGGCAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: PPAENNEEHTASPRSSSGAAYSP*DPRQSG
Trigger: GCCTGACTGCCTAGGGTCTCATGGACTGTAGGCAGC...CCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAATCCTGCTGGAAGCCCAGCTTCTGCATGGCTaGTCTAGAGAAGTGCAACCC +
Preference number: 4 (lower is better)
Translates to: STRLLPGHRQGDSILLEAQLLHG*SREVQP
Trigger: GGGTTGCACTTCTCTAGATCAGCCATGCAGAAGCTG...GGCTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510688.5
CDS-3UTR CCA 90 bp GCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAATCCTGCTGGAAGCCCCTCTTCAGCCACAAGTaGGTCTTCTGGGATCTCATG +
Preference number: 4 (lower is better)
Translates to: AHGFSPVIVRVTQSCWKPLFSHK*VFWDLM
Trigger: CATGAGATCCCAGAAGACCCACTTGTGGCTGAAGAG...GGGCTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGCGGTCATCGTCAGGGTaGCTCAATCCTGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PPAENNEEHTASPRSSSGRSSSG*LNPAGS
Trigger: GCTTCCAGCAGGATTGAGTCACCCTGACGATGACCG...CCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp ATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCAGCGGCGCCCGGGGCTaGCCAAGTCTTGCGGGTAAT +
Preference number: 4 (lower is better)
Translates to: MEGQKWTKNRSAKTGMSGSGARG*PSLAGN
Trigger: ATTACCCGCAAGACTTGGGCAGCCCCGGGCGCCGCT...GCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CTGGCTTTCTCATCAGCCGCCTGGAGCTTCCTCAGCCGCATCCTTTCTCTTGGCAACTTGCATGGAACTTaGCAATGGCTGGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LAFSSAAWSFLSRILSLGNLHGT*QWLGGP
Trigger: TGGACCACCCAGCCATTGTCAAGTTCCATGCAAGTT...GCCAAGAGAAAGGATGCGGCTGAGGAAGCTCCAGGCGGCTGATGAGAAAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514915.5
CDS-3UTR TCA 90 bp CTGGCTTTCTCATCAGCCGCCTGGAGCTTCCTCAGCCGCATCCTTTCTCTTGGCCAGCTTCTGCATGGCTaGTTCCCTCATGCGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LAFSSAAWSFLSRILSLGQLLHG*FPHAFH
Trigger: ATGAAACGCATGAGGGAATCAGCCATGCAGAAGCTG...GCCAAGAGAAAGGATGCGGCTGAGGAAGCTCCAGGCGGCTGATGAGAAAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAGCTGCCTACAGTCCATaGGACCCTAGGCAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: LKIMKSTRLLPGHRQGDSAAYSP*DPRQSG
Trigger: GCCTGACTGCCTAGGGTCTCATGGACTGTAGGCAGC...TGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp GTGGGTAAGCAGCCAAGGCCTACTTCACTGCATTCTCCACATCTGAATGGTGGGTTCTCATCAGCCGCCTaGAGCTTCCTCAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: VGKQPRPTSLHSPHLNGGFSSAA*SFLSRI
Trigger: GATGCGGCTGAGGAAGCTCCAGGCGGCTGATGAGAA...CCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGGCCTTGGCTGCTTACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp GTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGAGCTATCTCCAGCTGGTCAGGATGTaGGTAAGCAGCCAAGGCCTA +
Preference number: 4 (lower is better)
Translates to: VGLLQASKAQPPTGLSYLQLVRM*VSSQGL
Trigger: TAGGCCTTGGCTGCTTACCCACATCCTGACCAGCTG...GAGATAGCTCAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
3UTR CAA 72 bp CAGCCGCCTGGAGCTTCCTCAGCCGCATCCTTTCTCTaGGCGTCATTTTCTGTACTTCTGACAGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: QPPGASSAASFL*ASFSVLLTVPS
Trigger: TGAGGGCACTGTCAGAAGTACAGAAAATGACGCCAAGAGAAAGGATGCGGCTGAGGAAGCTCCAGGCGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGAGGGTCTGAGCTATCTCTaGGCATTGGGCTCAGTGATT +
Preference number: 4 (lower is better)
Translates to: RACGAPTGKQSTTTYRSEGLSYL*ALGSVI
Trigger: AATCACTGAGCCCAATGCTCAGAGATAGCTCAGACC...CTCAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp AGGTCAGCTAAGACAGGCATGTCTGGCTTCTGGGCTGTAGCTCAGCATGTTGTATTCTCATCAGCCGCCTaGAGCTTCCTCAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: RSAKTGMSGFWAVAQHVVFSSAA*SFLSRI
Trigger: GATGCGGCTGAGGAAGCTCCAGGCGGCTGATGAGAA...TACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCTGTCTTAGCTGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGCAGGCTGCCTACTCCCCAGCTTCTGCATaGCTGATTCCCTCATGCGTT +
Preference number: 4 (lower is better)
Translates to: SSACCRLESSDLHWQAAYSPASA*LIPSCV
Trigger: AACGCATGAGGGAATCAGCCATGCAGAAGCTGGGGA...GTAGGCAGCCTGCCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAATCCTGCTGGAAGCCATGGAAGGGCAAAAGTaGACCAAAAACAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: STRLLPGHRQGDSILLEAMEGQK*TKNRSA
Trigger: AGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCAT...GGCTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GTAAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCAACTTGCATGGAACTTaGCAATGGCTGGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: VKGMWGSYRQAKHNHLQVNLHGT*QWLGGP
Trigger: TGGACCACCCAGCCATTGTCAAGTTCCATGCAAGTT...GACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp GTAAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCGAGCCAGCGAATGCATaGTTCATGCAGCACATCTCA +
Preference number: 4 (lower is better)
Translates to: VKGMWGSYRQAKHNHLQVEPANA*FMQHIS
Trigger: TGAGATGTGCTGCATGAATCATGCATTCGCTGGCTC...GACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp CAGCCAAGGCCTACTTCACTGCATTCTCCACATCTGAATGGTGGGGTAGGGAGTATCCTCGTCCTGGGGTaGACAAGAAAGTCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: QPRPTSLHSPHLNGGVGSILVLG*TRKSSL
Trigger: GAGGGAAGACTTTCTTGTTCACCCCAGGACGAGGAT...ACTCCCTACCCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGGCCTTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp GTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGAGCTATCTCGAGCATTGGGCTCAGTaGTTGCTTAAAGAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VGLLQASKAQPPTGLSYLEHWAQ*LLKEWL
Trigger: CAGCCACTCTTTAAGCAATCACTGAGCCCAATGCTC...GAGATAGCTCAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp CCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGCTTCAGCCATGGTGGTaGTGGTCTTTGTGTCTAGAG +
Preference number: 4 (lower is better)
Translates to: PPAENNEEHTASPRSSSGLQPWW*WSLCLE
Trigger: CTCTAGACACAAAGACCATCACCACCATGGCTGAAG...CCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAATCCTGCTGGAAGGTTCTTTTCCCATCGTaGTCAGCAACTGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: RAHGFSPVIVRVTQSCWKVLFPS*SATALQ
Trigger: TTGAAGAGCAGTTGCTGATCACGATGGGAAAAGAAC...CTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAATCCTGCTGGAAGCCCAAGGGAGCCAAACTTaGTCTATAAGCTTATCTCAG +
Preference number: 4 (lower is better)
Translates to: STRLLPGHRQGDSILLEAQGSQT*SISLSQ
Trigger: CTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTG...GGCTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCCTGGGTGGTCCAGCTTaGAGAGGAGTTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: RGDIVSHRQPRTVKGMWGLGGPA*RGVGLP
Trigger: TGGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAG...GCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp CTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAATTGACAATGGCTGGGTaGTCCAGCTTGGAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LLEALRAHMREMLFKGAKLTMAG*SSLERS
Trigger: ACTCCTCTCCAAGCTGGACCACCCAGCCATTGTCAA...TTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TGTAAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTGAACTTGACAATGGCTaGGTGGTCCAGCTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: CKGHVGLLQASKAQPPTGELDNG*VVQLGE
Trigger: CTCTCCAAGCTGGACCACCCAGCCATTGTCAAGTTC...ACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp GTAAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTTCTCCACATCTGAATaGTGGGGTAGGGAGTCATGC +
Preference number: 4 (lower is better)
Translates to: VKGMWGSYRQAKHNHLQVFSTSE*WGRESC
Trigger: GCATGACTCCCTACCCCACCATTCAGATGTGGAGAA...GACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp CCTACTTCACTGCATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTCAGCTGGTCAGGATGTaGGTAAGCAGCCAAGGCCTA +
Preference number: 4 (lower is better)
Translates to: PTSLHSPHLNGGVGSHAPQLVRM*VSSQGL
Trigger: TAGGCCTTGGCTGCTTACCCACATCCTGACCAGCTG...AGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp AGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAATCCTGCTGGAAGCATTTTCCAAACACCTaGCCAACGCTTCGATATCAC +
Preference number: 4 (lower is better)
Translates to: RAHGFSPVIVRVTQSCWKHFPNT*PTLRYH
Trigger: GTGATATCGAAGCGTTGGCCAGGTGTTTGGAAAATG...CTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGGCATGTCTGGCTTCTGGGCTGTAGCTCAGCATGTTGTAGGCTAGAGTCCAGTGGCATGTCTGGCTTCTaGGCTGTAGCTCAGCATGTT +
Preference number: 4 (lower is better)
Translates to: RHVWLLGCSSACCRLESSGMSGF*AVAQHV
Trigger: AACATGCTGAGCTACAGCCCAGAAGCCAGACATGCC...ACTGGACTCTAGCCTACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCTCGGGCCACGGCTGTTTaGAACCGTGGCCAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: SQGIVQITLMTPSIGSHARATAV*NRGQGD
Trigger: GTCTCCCTGGCCACGGTTCCAAACAGCCGTGGCCCG...AGCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510769.5
3UTR CAA 72 bp GTACAGGAGCTGGTCCACTTCAAAACAGTCGCTGGCTaGAGGCACCACTTTTTCCAAACACTCGCGGATCTC +
Preference number: 4 (lower is better)
Translates to: VQELVHFKTVAG*RHHFFQTLADL
Trigger: GAGATCCGCGAGTGTTTGGAAAAAGTGGTGCCTCAAGCCAGCGACTGTTTTGAAGTGGACCAGCTCCTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAATCCTGCTGGAAGCTGCCAAGTTTTTGTTaGAGCACGTATCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: RAHGFSPVIVRVTQSCWKLPSFC*STYLLA
Trigger: TGCAAGAAGATACGTGCTTCAACAAAAACTTGGCAG...CTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGCATTTTCTGTACTTCTaGCAGTGCCCTCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: KGHVGLLQASKAQPPTGLHFLYF*QCPQSL
Trigger: CAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATG...CAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp ATCCTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCCATTTTCTGTACTTCTaGCAGTGCCCTCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: ILLEALRAHMREMLFKGAHFLYF*QCPQSL
Trigger: CAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATG...GGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAACTTATCCTCGTCCTGGGGTaGACAAGAAAGTCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: LEALRAHMREMLFKGAKLILVLG*TRKSSL
Trigger: GAGGGAAGACTTTCTTGTTCACCCCAGGACGAGGAT...AAGTTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CTGCATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTTGTAGACCCATGGAAGGAATAGGCTaGGACTCAGGCAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LHSPHLNGGVGSHAPCRPMEGIG*DSGRFS
Trigger: AGAGAACCTGCCTGAGTCTCAGCCTATTCCTTCCAT...GGGTCTACAAGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp CAGCCAAGGCCTACTTCACTGCATTCTCCACATCTGAATGGTGGGGTAGGGAGTTGGCTGAACAGGAAATaGAGAGGTGACAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: QPRPTSLHSPHLNGGVGSWLNRK*RGDSWS
Trigger: TGACCAGCTGTCACCTCTTCATTTCCTGTTCAGCCA...ACTCCCTACCCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGGCCTTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp GTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGAGCTATCTCTTCAGACTTTCCAGCTaGAAAGGGTCCTTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: VGLLQASKAQPPTGLSYLFRLSS*KGSFRS
Trigger: TGACCTGAAGGACCCTTTTCAGCTGGAAAGTCTGAA...GAGATAGCTCAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511262.5
CDS-3UTR GCA 90 bp CCACTTGAACTTCTGCTTCTTTTTGATAGTTGCCTAGAGATGGTTCTGGAGAGTAGCGGCGCCCGGGGCTaGCCAAGTCTTGCGGGTAAT +
Preference number: 4 (lower is better)
Translates to: PLELLLLFDSCLEMVLESSGARG*PSLAGN
Trigger: ATTACCCGCAAGACTTGGGCAGCCCCGGGCGCCGCT...ACTCTCCAGAACCATCTCTAGGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCATCTGTCCCCAGCTTCTaGATGGCTGATTCCCTCATG +
Preference number: 4 (lower is better)
Translates to: LKIMKSTRLLPGHRQGDSSVPSF*MADSLM
Trigger: CATGAGGGAATCAGCCATGCAGAAGCTGGGGACAGA...TGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000514915.5
CDS-3UTR GCA 90 bp TTGGCGTCATTTTCTGTACTTCTGACAGTGCCCTCAGAGTCTGCAGGTGGATCCTCTGTCCCCAGCTTCTaGATGGCTGATTCCCTCATG +
Preference number: 4 (lower is better)
Translates to: LASFSVLLTVPSESAGGSSVPSF*MADSLM
Trigger: CATGAGGGAATCAGCCATGCAGAAGCTGGGGACAGA...GGATCCACCTGCAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATGACGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAATCCTGCTGGAAGCCGTCCACTTGAACTTCTaGTTCTTTTTGATAGTTGCC +
Preference number: 4 (lower is better)
Translates to: STRLLPGHRQGDSILLEAVHLNF*FFLIVA
Trigger: GGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGGAC...GGCTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAATCTGTCCCCAGCTTCTaGATGGCTGATCTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LLEALRAHMREMLFKGAKSVPSF*MADLEK
Trigger: CTTCTCTAGATCAGCCATGCAGAAGCTGGGGACAGA...TTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510688.5
CDS-3UTR CCA 90 bp GTGGGTAAGCAGCCAAGGCCTACTTCACTGCATTCTCCACATCTGAATGGTGGGAGCTTGGAGAGGAGTTaGGCTTCCAAATTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: VGKQPRPTSLHSPHLNGGSLERS*ASKLAC
Trigger: ACAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCT...CCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGGCCTTGGCTGCTTACCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp AGGTCAGCTAAGACAGGCATGTCTGGCTTCTGGGCTGTAGCTCAGCATGTTGTAGAACTTGACAATGGCTaGGTGGTCCAGCTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: RSAKTGMSGFWAVAQHVVELDNG*VVQLGE
Trigger: CTCTCCAAGCTGGACCACCCAGCCATTGTCAAGTTC...TACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCTGTCTTAGCTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTTCCAGTTAAAGTTGTaGCCAGGTCACAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: PPAENNEEHTASPRSSSGFQLKL*PGHRIP
Trigger: TGGGATCCTGTGACCTGGCCACAACTTTAACTGGAA...CCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGCAGGCTGCCTACTTCCAGTTAAAGTTGTaGCCAGGTCACAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: SSACCRLESSDLHWQAAYFQLKL*PGHRIP
Trigger: TGGGATCCTGTGACCTGGCCACAACTTTAACTGGAA...GTAGGCAGCCTGCCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCTCCTACAGGACTGTAAAGGGCATGTaGGGCTCCTACAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: IVSHRQPRTVKGMWGSYRTVKGM*GSYRQA
Trigger: TGCTTGCCTGTAGGAGCCCCACATGCCCTTTACAGT...CCTGTAGGAGCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp GGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGATTCCTTTCCCTGTCGTaGTCGGAGCGGCGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GIESQDGSSAFVSIPHNRFLSLS*SERRPG
Trigger: CCCCGGGCGCCGCTCCGACCACGACAGGGAAAGGAA...TCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATTTCCTTTCCCTGTCGTaGTCGGAGCGGCGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LSQGIVQITLMTPSIGSHFLSLS*SERRPG
Trigger: CCCCGGGCGCCGCTCCGACCACGACAGGGAAAGGAA...ATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTTCTGGGCTGTAGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGCTCTTCAGCCACAAGTaGGTCTTCTGGGATCTCATG +
Preference number: 4 (lower is better)
Translates to: LLGCSSACCRLESSDLHWLFSHK*VFWDLM
Trigger: CATGAGATCCCAGAAGACCCACTTGTGGCTGAAGAG...CCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCTACAGCCCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTCATGCGTTTCATCTTaGTCCTGGCCATCACACTGT +
Preference number: 4 (lower is better)
Translates to: PPAENNEEHTASPRSSSGSCVSS*SWPSHC
Trigger: ACAGTGTGATGGCCAGGACCAAGATGAAACGCATGA...CCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGGCTGTTTGGAACCGTaGCCAGGGAGACGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: LSQGIVQITLMTPSIGSHGCLEP*PGRRRG
Trigger: CCCGCGCCGTCTCCCTGGCCACGGTTCCAAACAGCC...ATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510769.5
CDS-3UTR TCA 90 bp GTCCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGAGTGGAAATGGCTGTTaGTCCACTCACACACTTAGC +
Preference number: 4 (lower is better)
Translates to: VLQLKIMKSTRLLPGHRQSGNGC*STHTLS
Trigger: GCTAAGTGTGTGAGTGGATCAACAGCCATTTCCACT...CTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GACTCAATCCTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGAGCCAGCGAATGCATaGTTCATGCAGCACATCTCA +
Preference number: 4 (lower is better)
Translates to: DSILLEALRAHMREMLFKEPANA*FMQHIS
Trigger: TGAGATGTGCTGCATGAATCATGCATTCGCTGGCTC...CTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAGGATTGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AGGCATGTCTGGCTTCTGGGCTGTAGCTCAGCATGTTGTAGGCTAGAGTCCAGTCATTTTCTGTACTTCTaGCAGTGCCCTCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: RHVWLLGCSSACCRLESSHFLYF*QCPQSL
Trigger: CAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATG...ACTGGACTCTAGCCTACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GTAAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTCAACACTCAGCTGCTaGAAGTTCCGAGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: VKGMWGSYRQAKHNHLQVSTLSC*KFRDLN
Trigger: ATTGAGATCTCGGAACTTTCAGCAGCTGAGTGTTGA...GACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp CTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAACTTATGGAAGGAATAGGCTaGGACTCAGGCAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LEALRAHMREMLFKGAKLMEGIG*DSGRFS
Trigger: AGAGAACCTGCCTGAGTCTCAGCCTATTCCTTCCAT...AAGTTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TTGGCGTCATTTTCTGTACTTCTGACAGTGCCCTCAGAGTCTGCAGGTGGATCCATGGAAGGAATAGGCTaGGACTCAGGCAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LASFSVLLTVPSESAGGSMEGIG*DSGRFS
Trigger: AGAGAACCTGCCTGAGTCTCAGCCTATTCCTTCCAT...GGATCCACCTGCAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATGACGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GGCGTCATTTTCTGTACTTCTGACAGTGCCCTCAGAGTCTGCAGGTGGATCCTTATGGAAGGAATAGGCTaGGACTCAGGCAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: GVIFCTSDSALRVCRWILMEGIG*DSGRFS
Trigger: AGAGAACCTGCCTGAGTCTCAGCCTATTCCTTCCAT...AAGGATCCACCTGCAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATGACGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAAGGCATCCTCTACAATTaGTTCAAGTTCGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: LLEALRAHMREMLFKGAKGILYN*FKFVEV
Trigger: GACCTCCACGAACTTGAATCAATTGTAGAGGATGCC...TTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GTCCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGCATCCTCTACAATTaGTTCAAGTTCGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: VLQLKIMKSTRLLPGHRQGILYN*FKFVEV
Trigger: GACCTCCACGAACTTGAATCAATTGTAGAGGATGCC...CTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CCTACTTCACTGCATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTGAGCATTGGGCTCAGTaGTTGCTTAAAGAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PTSLHSPHLNGGVGSHAPEHWAQ*LLKEWL
Trigger: CAGCCACTCTTTAAGCAATCACTGAGCCCAATGCTC...AGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp AGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGCAGGCTGCCTACGTTCTTTTCCCATCGTaGTCAGCAACTGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SSACCRLESSDLHWQAAYVLFPS*SATALQ
Trigger: TTGAAGAGCAGTTGCTGATCACGATGGGAAAAGAAC...GTAGGCAGCCTGCCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGCAGGCTGCCTACATTGGAGCCAGCGAATaGATGATTCATGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: SSACCRLESSDLHWQAAYIGASE*MIHAAH
Trigger: ATGTGCTGCATGAATCATGCATTCGCTGGCTCCAAT...GTAGGCAGCCTGCCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp GTAAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCAAGTCAGCTGTGAGTTaGATGGTATCCAAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: VKGMWGSYRQAKHNHLQVKSAVS*MVSKVR
Trigger: TCTGACCTTGGATACCATGCAACTCACAGCTGACTT...GACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR GCA 90 bp GCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAATCCTGCTGGAAGCCCAATCTCCTAACTAGTTaGACACTTTTATTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: AHGFSPVIVRVTQSCWKPNLLTS*TLLFLP
Trigger: AGGAAGGAATAAAAGTGTGCAACTAGTTAGGAGATT...GGGCTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514915.5
CDS-3UTR CCA 90 bp AGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAATCCTGCTGGAAGTGCAATCAAGGTCTTTaGATAAGTGGAAATGGCTGT +
Preference number: 4 (lower is better)
Translates to: RAHGFSPVIVRVTQSCWKCNQGL*ISGNGC
Trigger: ACAGCCATTTCCACTTATCCAAAGACCTTGATTGCA...CTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGCTCTGTCCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATAGCTTGGAGAGGAGTTaGGCTTCCAAATTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SSVLQLKIMKSTRLLPGHSLERS*ASKLAC
Trigger: ACAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCT...ATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGGACAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCTCCTACAGGAGCTTGGAGAGGAGTTaGGCTTCCAAATTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: IVSHRQPRTVKGMWGSYRSLERS*ASKLAC
Trigger: ACAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCT...CCTGTAGGAGCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp AGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCTTGACAATGGCTGGGTaGTCCAGCTTGGAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: RGDIVSHRQPRTVKGMWGLTMAG*SSLERS
Trigger: ACTCCTCTCCAAGCTGGACCACCCAGCCATTGTCAA...GCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp AGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCGAACTTGACAATGGCTaGGTGGTCCAGCTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: RGDIVSHRQPRTVKGMWGELDNG*VVQLGE
Trigger: CTCTCCAAGCTGGACCACCCAGCCATTGTCAAGTTC...GCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp CTGGTCAGGATGTGGGTAAGCAGCCAAGGCCTACTTCACTGCATTCTCCACATCTTCCAGTTAAAGTTGTaGCCAGGTCACAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: LVRMWVSSQGLLHCILHIFQLKL*PGHRIP
Trigger: TGGGATCCTGTGACCTGGCCACAACTTTAACTGGAA...GATGTGGAGAATGCAGTGAAGTAGGCCTTGGCTGCTTACCCACATCCTGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp AGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAATCCTGCTGGAAGATCCAAGGTCAGATGTaGCATCCTCTACAATTGATT +
Preference number: 4 (lower is better)
Translates to: RAHGFSPVIVRVTQSCWKIQGQM*HPLQLI
Trigger: AATCAATTGTAGAGGATGCCACATCTGACCTTGGAT...CTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCACTGTAAAGGGCATGTaGGGCTCCTACAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: RGDIVSHRQPRTVKGMWGTVKGM*GSYRQA
Trigger: TGCTTGCCTGTAGGAGCCCCACATGCCCTTTACAGT...GCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp CTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAACACACTGTTGAAAATTaGTGGTCCTGGGGACATGTC +
Preference number: 4 (lower is better)
Translates to: LLEALRAHMREMLFKGAKHTVEN*WSWGHV
Trigger: GACATGTCCCCAGGACCACCAATTTTCAACAGTGTG...TTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTCTGTCCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGCACACTGTTGAAAATTaGTGGTCCTGGGGACATGTC +
Preference number: 4 (lower is better)
Translates to: LCPPAENNEEHTASPRSSHTVEN*WSWGHV
Trigger: GACATGTCCCCAGGACCACCAATTTTCAACAGTGTG...CGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATCCTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCTCAAAGTACAGGAGCTaGTCCACTTCAAAACAGTCG +
Preference number: 4 (lower is better)
Translates to: ILLEALRAHMREMLFKGASKYRS*STSKQS
Trigger: CGACTGTTTTGAAGTGGACCAGCTCCTGTACTTTGA...GGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TGCAACCCAGGACATTTTCCAAACACCTGGCCAACGCTTCGATATCACTGTCCTGGCATGTCTGGCTTCTaGGCTGTAGCTCAGCATGTT +
Preference number: 4 (lower is better)
Translates to: CNPGHFPNTWPTLRYHCPGMSGF*AVAQHV
Trigger: AACATGCTGAGCTACAGCCCAGAAGCCAGACATGCC...AGGACAGTGATATCGAAGCGTTGGCCAGGTGTTTGGAAAATGTCCTGGGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp GAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCGGCATGTCTGGCTTCTaGGCTGTAGCTCAGCATGTT +
Preference number: 4 (lower is better)
Translates to: EGQKWTKNRSAKTGMSGFGMSGF*AVAQHV
Trigger: AACATGCTGAGCTACAGCCCAGAAGCCAGACATGCC...GAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AGCTCTGTCCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATAGTGGAAATGGCTGTTaGTCCACTCACACACTTAGC +
Preference number: 4 (lower is better)
Translates to: SSVLQLKIMKSTRLLPGHSGNGC*STHTLS
Trigger: GCTAAGTGTGTGAGTGGATCAACAGCCATTTCCACT...ATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGGACAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGAGCTATCTCCTGCCAAGTTTTTGTTaGAGCACGTATCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: VGLLQASKAQPPTGLSYLLPSFC*STYLLA
Trigger: TGCAAGAAGATACGTGCTTCAACAAAAACTTGGCAG...GAGATAGCTCAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp GTAAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCCTGCCAAGTTTTTGTTaGAGCACGTATCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: VKGMWGSYRQAKHNHLQVLPSFC*STYLLA
Trigger: TGCAAGAAGATACGTGCTTCAACAAAAACTTGGCAG...GACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp AGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCAACTTGCATGGAACTTaGCAATGGCTGGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: RGDIVSHRQPRTVKGMWGNLHGT*QWLGGP
Trigger: TGGACCACCCAGCCATTGTCAAGTTCCATGCAAGTT...GCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp TGTAAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTGACTTTAAGTCTCGATaGAGTATCCTCCTCTCATGC +
Preference number: 4 (lower is better)
Translates to: CKGHVGLLQASKAQPPTGDFKSR*SILLSC
Trigger: GCATGAGAGGAGGATACTTCATCGAGACTTAAAGTC...ACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp CTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAAGACTTTAAGTCTCGATaGAGTATCCTCCTCTCATGC +
Preference number: 4 (lower is better)
Translates to: LLEALRAHMREMLFKGAKDFKSR*SILLSC
Trigger: GCATGAGAGGAGGATACTTCATCGAGACTTAAAGTC...TTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GTCCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGTCAACACTCAGCTGCTaGAAGTTCCGAGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: VLQLKIMKSTRLLPGHRQSTLSC*KFRDLN
Trigger: ATTGAGATCTCGGAACTTTCAGCAGCTGAGTGTTGA...CTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCATGGAAGGAATAGGCTaGGACTCAGGCAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RGDIVSHRQPRTVKGMWGMEGIG*DSGRFS
Trigger: AGAGAACCTGCCTGAGTCTCAGCCTATTCCTTCCAT...GCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp CCTACTTCACTGCATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTGGCATCCTCTACAATTaGTTCAAGTTCGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PTSLHSPHLNGGVGSHAPGILYN*FKFVEV
Trigger: GACCTCCACGAACTTGAATCAATTGTAGAGGATGCC...AGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp AGGTCAGCTAAGACAGGCATGTCTGGCTTCTGGGCTGTAGCTCAGCATGTTGTAGGCATCCTCTACAATTaGTTCAAGTTCGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: RSAKTGMSGFWAVAQHVVGILYN*FKFVEV
Trigger: GACCTCCACGAACTTGAATCAATTGTAGAGGATGCC...TACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCTGTCTTAGCTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp ATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCTCCTACAGGGGCATCCTCTACAATTaGTTCAAGTTCGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: IVSHRQPRTVKGMWGSYRGILYN*FKFVEV
Trigger: GACCTCCACGAACTTGAATCAATTGTAGAGGATGCC...CCTGTAGGAGCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp CTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAACTTTTCAGACTTTCCAGCTaGAAAGGGTCCTTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LEALRAHMREMLFKGAKLFRLSS*KGSFRS
Trigger: TGACCTGAAGGACCCTTTTCAGCTGGAAAGTCTGAA...AAGTTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383366.9
CDS-3UTR TCA 90 bp AGCTCTGTCCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATAAACAGTCGCTGGCTTaGGGCACCACTTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SSVLQLKIMKSTRLLPGHKQSLA*GTTFSK
Trigger: TTTGGAAAAAGTGGTGCCTCAAGCCAGCGACTGTTT...ATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGGACAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CTTCTGGGCTGTAGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGCTTCTGATGAGGAATTaGAAGTCAAGATGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LLGCSSACCRLESSDLHWLLMRN*KSRWEL
Trigger: GAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAG...CCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCTACAGCCCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CTTCACAATAGGAATCAAATGCATCAGCGTAGTACTCTTCAGCCACAAGTGGGTCGGTCATCGTCAGGGTaGCTCAATCCTGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LHNRNQMHQRSTLQPQVGRSSSG*LNPAGS
Trigger: GCTTCCAGCAGGATTGAGTCACCCTGACGATGACCG...ACCCACTTGTGGCTGAAGAGTACTACGCTGATGCATTTGATTCCTATTGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGAGACATCTCATACAAAATaGATGCCAGTGACCAGATGT +
Preference number: 4 (lower is better)
Translates to: RACGAPTGKQSTTTYRSETSHTK*MPVTRC
Trigger: ACATCTGGTCACTGGCATGCATTTTGTATGAGATGT...CTCAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR GCA 90 bp TGTAAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTATTGGAGCCAGCGAATaGATGATTCATGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: CKGHVGLLQASKAQPPTGIGASE*MIHAAH
Trigger: ATGTGCTGCATGAATCATGCATTCGCTGGCTCCAAT...ACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR GCA 90 bp AGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAATCCTGCTGGAAGAGCATTCTGATGCCTTaGTCTCTTGAGGTAATTATA +
Preference number: 4 (lower is better)
Translates to: RAHGFSPVIVRVTQSCWKSILMP*SLEVII
Trigger: TATAATTACCTCAAGAGAGCAAGGCATCAGAATGCT...CTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp GTCCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGCTGATCTAGAGAAGTaGAACCCAGGACATTTTCCA +
Preference number: 4 (lower is better)
Translates to: VLQLKIMKSTRLLPGHRQADLEK*NPGHFP
Trigger: TGGAAAATGTCCTGGGTTGCACTTCTCTAGATCAGC...CTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510688.5
CDS-3UTR CCA 90 bp CTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAACACTTAGCTGCCTCTTaGAATTTCAGCATTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLEALRAHMREMLFKGAKHLAAS*NFSIAP
Trigger: TGGAGCAATGCTGAAATTCCAAGAGGCAGCTAAGTG...TTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGAGGTCTTTGGATAAGTaGAAATGGCTGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: KGHVGLLQASKAQPPTGLRSLDK*KWLLIH
Trigger: GTGGATCAACAGCCATTTCCACTTATCCAAAGACCT...CAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp GTAAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCAGGTCTTTGGATAAGTaGAAATGGCTGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: VKGMWGSYRQAKHNHLQVRSLDK*KWLLIH
Trigger: GTGGATCAACAGCCATTTCCACTTATCCAAAGACCT...GACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp AAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGGTTGGGCTTCCAAATTaGCCTGTACAGTTTCATTTG +
Preference number: 4 (lower is better)
Translates to: KGHVGLLQASKAQPPTGLVGLPN*PVQFHL
Trigger: CAAATGAAACTGTACAGGCCAATTTGGAAGCCCAAC...CAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp GAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCAGCTTGGAGAGGAGTTaGGCTTCCAAATTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: EGQKWTKNRSAKTGMSGFSLERS*ASKLAC
Trigger: ACAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCT...GAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCCTGGGTGGTCCAGCTTaGAGAGGAGTTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: ISGYSPNNTYDSKHRQPCLGGPA*RGVGLP
Trigger: TGGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAG...GCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCTTTGACAATGGCTGGGTaGTCCAGCTTGGAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: KGKSGPKTGQLRQACLASLTMAG*SSLERS
Trigger: ACTCCTCTCCAAGCTGGACCACCCAGCCATTGTCAA...AGAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTTGTAGACCCAGGTCCACAAAACTTGCATaGAACTTGACAATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HSPHLNGGVGSHAPCRPRSTKLA*NLTMAG
Trigger: CCCAGCCATTGTCAAGTTCCATGCAAGTTTTGTGGA...CCTGGGTCTACAAGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp AGGCATGTCTGGCTTCTGGGCTGTAGCTCAGCATGTTGTAGGCTAGAGTCCAGTTCCACAAAACTTGCATaGAACTTGACAATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RHVWLLGCSSACCRLESSSTKLA*NLTMAG
Trigger: CCCAGCCATTGTCAAGTTCCATGCAAGTTTTGTGGA...ACTGGACTCTAGCCTACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTTGTAGACCCAGGCCGCATCCTTTCTCTTaGCGTCATTTTCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: HSPHLNGGVGSHAPCRPRPHPFS*RHFLYF
Trigger: GAAGTACAGAAAATGACGCCAAGAGAAAGGATGCGG...CCTGGGTCTACAAGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp TCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCTTTCTCATCAGCCGCCTaGAGCTTCCTCAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: SQGIVQITLMTPSIGSHAFSSAA*SFLSRI
Trigger: GATGCGGCTGAGGAAGCTCCAGGCGGCTGATGAGAA...AGCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTGCATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTTGTAGACCCTCTTCATCCTCGTCCTaGGGTGAACAAGAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: LHSPHLNGGVGSHAPCRPSSSSS*GEQESL
Trigger: AAGACTTTCTTGTTCACCCCAGGACGAGGATGAAGA...GGGTCTACAAGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp CTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTTCTTCATCCTCGTCCTaGGGTGAACAAGAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: LQLKIMKSTRLLPGHRQGSSSSS*GEQESL
Trigger: AAGACTTTCTTGTTCACCCCAGGACGAGGATGAAGA...ACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGTTCCTTTCCCTGTCGTaGTCGGAGCGGCGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: YKLISGYSPNNTYDSKHRFLSLS*SERRPG
Trigger: CCCCGGGCGCCGCTCCGACCACGACAGGGAAAGGAA...CCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp GGCGTCATTTTCTGTACTTCTGACAGTGCCCTCAGAGTCTGCAGGTGGATCCTTCACAAGTGGGTCTTCTaGGATCTCATGGTATCCAAG +
Preference number: 4 (lower is better)
Translates to: GVIFCTSDSALRVCRWILHKWVF*DLMVSK
Trigger: CTTGGATACCATGAGATCCCAGAAGACCCACTTGTG...AAGGATCCACCTGCAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATGACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTCATTTTCCAAACACCTaGCCAACGCTTCGATATCAC +
Preference number: 4 (lower is better)
Translates to: LQLKIMKSTRLLPGHRQGHFPNT*PTLRYH
Trigger: GTGATATCGAAGCGTTGGCCAGGTGTTTGGAAAATG...ACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGCAGGCTGCCTACAGTCTTCAAAACAGTCGCTaGCTTGAGGCACCACTTTTT +
Preference number: 4 (lower is better)
Translates to: SACCRLESSDLHWQAAYSLQNSR*LEAPLF
Trigger: AAAAAGTGGTGCCTCAAGCCAGCGACTGTTTTGAAG...ACTGTAGGCAGCCTGCCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTTCTGGGCTGTAGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGTCAAAGTACAGGAGCTaGTCCACTTCAAAACAGTCG +
Preference number: 4 (lower is better)
Translates to: LLGCSSACCRLESSDLHWSKYRS*STSKQS
Trigger: CGACTGTTTTGAAGTGGACCAGCTCCTGTACTTTGA...CCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCTACAGCCCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGGCATGTCTGGCTTCTGGGCTGTAGCTCAGCATGTTGTAGGCTAGAGTCCAGTTCAAAGTACAGGAGCTaGTCCACTTCAAAACAGTCG +
Preference number: 4 (lower is better)
Translates to: RHVWLLGCSSACCRLESSSKYRS*STSKQS
Trigger: CGACTGTTTTGAAGTGGACCAGCTCCTGTACTTTGA...ACTGGACTCTAGCCTACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGCAGGCTGCCTACGGTTCATCAGATTCATaGAGTACATCAACACTCAGC +
Preference number: 4 (lower is better)
Translates to: SSACCRLESSDLHWQAAYGSSDS*STSTLS
Trigger: GCTGAGTGTTGATGTACTCCATGAATCTGATGAACC...GTAGGCAGCCTGCCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510474.5
CDS-3UTR TCA 90 bp CTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTTTTGGCTTTCTTGTCTaGAACCAGATAGACAGTTCC +
Preference number: 4 (lower is better)
Translates to: LQLKIMKSTRLLPGHRQGFGFLV*NQIDSS
Trigger: GGAACTGTCTATCTGGTTTCAGACAAGAAAGCCAAA...ACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCTAACTTGCATGGAACTTaGCAATGGCTGGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: KGKSGPKTGQLRQACLASNLHGT*QWLGGP
Trigger: TGGACCACCCAGCCATTGTCAAGTTCCATGCAAGTT...AGAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AGGTCAGCTAAGACAGGCATGTCTGGCTTCTGGGCTGTAGCTCAGCATGTTGTATCAACACTCAGCTGCTaGAAGTTCCGAGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: RSAKTGMSGFWAVAQHVVSTLSC*KFRDLN
Trigger: ATTGAGATCTCGGAACTTTCAGCAGCTGAGTGTTGA...TACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCTGTCTTAGCTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCTCAGCTTCTGCATGGCTaGTTCCCTCATGCGTTTCAT +
Preference number: 4 (lower is better)
Translates to: KGKSGPKTGQLRQACLASQLLHG*FPHAFH
Trigger: ATGAAACGCATGAGGGAATCAGCCATGCAGAAGCTG...AGAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCACTTCTGATGAGGAATTaGAAGTCAAGATGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LKIMKSTRLLPGHRQGDSLLMRN*KSRWEL
Trigger: GAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAG...TGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CTTCTGGGCTGTAGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGCAAGGGAGCCAAACTTaGTCTATAAGCTTATCTCAG +
Preference number: 4 (lower is better)
Translates to: LLGCSSACCRLESSDLHWQGSQT*SISLSQ
Trigger: CTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTG...CCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCTACAGCCCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATAGCTGCCTACAGTCCATaGGACCCTAGGCAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: QDGSSAFVSIPHNRVQLIAAYSP*DPRQSG
Trigger: GCCTGACTGCCTAGGGTCTCATGGACTGTAGGCAGC...TATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp TCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGCAGGCTGCCTACAGTACTCACACACTTAGCTaGCTCTTGGAATTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SACCRLESSDLHWQAAYSTHTLS*LLEFQH
Trigger: ATGCTGAAATTCCAAGAGGCAGCTAAGTGTGTGAGT...ACTGTAGGCAGCCTGCCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp GTGGGTAAGCAGCCAAGGCCTACTTCACTGCATTCTCCACATCTGAATGGTGGGACTCACACACTTAGCTaGCTCTTGGAATTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: VGKQPRPTSLHSPHLNGGTHTLS*LLEFQH
Trigger: ATGCTGAAATTCCAAGAGGCAGCTAAGTGTGTGAGT...CCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGGCCTTGGCTGCTTACCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR GCA 90 bp CAGCCAAGGCCTACTTCACTGCATTCTCCACATCTGAATGGTGGGGTAGGGAGTTTGCTCCACAAAACTTaGATGGAACTTGACAATGGC +
Preference number: 4 (lower is better)
Translates to: QPRPTSLHSPHLNGGVGSLLHKT*MELDNG
Trigger: GCCATTGTCAAGTTCCATGCAAGTTTTGTGGAGCAA...ACTCCCTACCCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGGCCTTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR GCA 90 bp GTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGAGCTATCTCACATCTCATACAAAATaGATGCCAGTGACCAGATGT +
Preference number: 4 (lower is better)
Translates to: VGLLQASKAQPPTGLSYLTSHTK*MPVTRC
Trigger: ACATCTGGTCACTGGCATGCATTTTGTATGAGATGT...GAGATAGCTCAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR GCA 90 bp AGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGAGCGAATGCATGATTCATaGAGCACATCTCATACAAAA +
Preference number: 4 (lower is better)
Translates to: RACGAPTGKQSTTTYRSERMHDS*STSHTK
Trigger: TTTTGTATGAGATGTGCTGCATGAATCATGCATTCG...CTCAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR GCA 90 bp AGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAATCCTGCTGGAAGCGAGATCTCAATTCTTaGATTCGTTTGCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: RAHGFSPVIVRVTQSCWKRDLNS*IRLLFS
Trigger: AGAAAATAGCAAACGAATGCAAGAATTGAGATCTCG...CTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AAATGCTTTTCAAGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTAGCGGCGCCCGGGGCTaGCCAAGTCTTGCGGGTAAT +
Preference number: 4 (lower is better)
Translates to: KCFSREPNLIYKLISGYSSGARG*PSLAGN
Trigger: ATTACCCGCAAGACTTGGGCAGCCCCGGGCGCCGCT...ACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTGAAAAGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGAGCGGCGCCCGGGGCTaGCCAAGTCTTGCGGGTAAT +
Preference number: 4 (lower is better)
Translates to: HLKRRGDIVSHRQPRTVKSGARG*PSLAGN
Trigger: ATTACCCGCAAGACTTGGGCAGCCCCGGGCGCCGCT...CTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511262.5
CDS-3UTR GCA 90 bp AGTCGCTGGCTTGAGGCACCACTTTTTCCAAACACTCGCGGATCTCTGCTTCGCAAGCATAGGCAGCCATaGTTACTACTCTCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: SRWLEAPLFPNTRGSLLRKHRQP*LLLSKE
Trigger: TTCTTTAGAGAGTAGTAAGCATGGCTGCCTATGCTT...GCGAAGCAGAGATCCGCGAGTGTTTGGAAAAAGTGGTGCCTCAAGCCAGCGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CCACTTGAACTTCTGCTTCTTTTTGATAGTTGCCTAGAGATGGTTCTGGAGAGTCCTTCACTGGCAGGCTaGCTACAGTCCATGAGACCC +
Preference number: 4 (lower is better)
Translates to: PLELLLLFDSCLEMVLESPSLAG*LQSMRP
Trigger: GGGTCTCATGGACTGTAGGCAGCCTGCCAGTGAAGG...ACTCTCCAGAACCATCTCTAGGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTTGGCGTCATTTTCTGTACTTCTGACAGTGCCCTCAGAGTCTGCAGGTGGATCCACTTAGCTGCCTCTTaGAATTTCAGCATTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LGVIFCTSDSALRVCRWIHLAAS*NFSIAP
Trigger: TGGAGCAATGCTGAAATTCCAAGAGGCAGCTAAGTG...GATCCACCTGCAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATGACGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTGCATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTTGTAGACCCTTGGATAAGTGGAAATaGCTGTTGATCCACTCACAC +
Preference number: 4 (lower is better)
Translates to: LHSPHLNGGVGSHAPCRPLDKWK*LLIHSH
Trigger: GTGTGAGTGGATCAACAGCCATTTCCACTTATCCAA...GGGTCTACAAGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp CATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTTGTAGACCCAGGTTGGATAAGTGGAAATaGCTGTTGATCCACTCACAC +
Preference number: 4 (lower is better)
Translates to: HSPHLNGGVGSHAPCRPRLDKWK*LLIHSH
Trigger: GTGTGAGTGGATCAACAGCCATTTCCACTTATCCAA...CCTGGGTCTACAAGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp CTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAAAGGTCTTTGGATAAGTaGAAATGGCTGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: LLEALRAHMREMLFKGAKRSLDK*KWLLIH
Trigger: GTGGATCAACAGCCATTTCCACTTATCCAAAGACCT...TTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp GAACTTCTGCTTCTTTTTGATAGTTGCCTAGAGATGGTTCTGGAGAGTAGGTTCCTGGGTGGTCCAGCTTaGAGAGGAGTTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: ELLLLFDSCLEMVLESRFLGGPA*RGVGLP
Trigger: TGGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAG...GAACCTACTCTCCAGAACCATCTCTAGGCAACTATCAAAAAGAAGCAGAAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCTTCCAGTTAAAGTTGTaGCCAGGTCACAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: RGDIVSHRQPRTVKGMWGFQLKL*PGHRIP
Trigger: TGGGATCCTGTGACCTGGCCACAACTTTAACTGGAA...GCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp ACTCTCTTCACAATAGGAATCAAATGCATCAGCGTAGTACTCTTCAGCCACAAGTTCTCATCAGCCGCCTaGAGCTTCCTCAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: TLFTIGIKCISVVLFSHKFSSAA*SFLSRI
Trigger: GATGCGGCTGAGGAAGCTCCAGGCGGCTGATGAGAA...CTTGTGGCTGAAGAGTACTACGCTGATGCATTTGATTCCTATTGTGAAGAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATCCTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCATCCAAGGTCAGATGTaGCATCCTCTACAATTGATT +
Preference number: 4 (lower is better)
Translates to: ILLEALRAHMREMLFKGAIQGQM*HPLQLI
Trigger: AATCAATTGTAGAGGATGCCACATCTGACCTTGGAT...GGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGGTCAGCTAAGACAGGCATGTCTGGCTTCTGGGCTGTAGCTCAGCATGTTGTATCTTCTGGGATCTCATaGTATCCAAGGTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: RSAKTGMSGFWAVAQHVVSSGIS*YPRSDV
Trigger: CACATCTGACCTTGGATACCATGAGATCCCAGAAGA...TACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCTGTCTTAGCTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGCTCTGTCCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCTTCAAAACAGTCGCTaGCTTGAGGCACCACTTTTT +
Preference number: 4 (lower is better)
Translates to: SSVLQLKIMKSTRLLPGHLQNSR*LEAPLF
Trigger: AAAAAGTGGTGCCTCAAGCCAGCGACTGTTTTGAAG...ATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGGACAGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCATCAAAGTACAGGAGCTaGTCCACTTCAAAACAGTCG +
Preference number: 4 (lower is better)
Translates to: LKIMKSTRLLPGHRQGDSSKYRS*STSKQS
Trigger: CGACTGTTTTGAAGTGGACCAGCTCCTGTACTTTGA...TGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
3UTR CAA 72 bp CCTCAGGACTCATATAATGGGGAGTTCCAGTTAAAGTaGTGGCCAGGTCACAGGATCCCATTAGAAGTCGAG +
Preference number: 4 (lower is better)
Translates to: PQDSYNGEFQLK*WPGHRIPLEVE
Trigger: CTCGACTTCTAATGGGATCCTGTGACCTGGCCACAACTTTAACTGGAACTCCCCATTATATGAGTCCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510474.5
CDS-3UTR TCA 90 bp TCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCTGCTTCGCTAGCATTCTaGTGCCTTGCTCTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: SQGIVQITLMTPSIGSHAASLAF*CLALLR
Trigger: CCTCAAGAGAGCAAGGCATCAGAATGCTAGCGAAGC...AGCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp ATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCGCTTCGCTAGCATTCTaGTGCCTTGCTCTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: ISGYSPNNTYDSKHRQPCASLAF*CLALLR
Trigger: CCTCAAGAGAGCAAGGCATCAGAATGCTAGCGAAGC...GCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATATGTCGGTCATCGTCAGGGTaGCTCAATCCTGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: DGSSAFVSIPHNRVQLICRSSSG*LNPAGS
Trigger: GCTTCCAGCAGGATTGAGTCACCCTGACGATGACCG...ACATATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGCAGGCTGCCTACTTGGAATTTCAGCATTaGTCCAAACAAGAGAGAACT +
Preference number: 4 (lower is better)
Translates to: SSACCRLESSDLHWQAAYLEFQH*SKQERT
Trigger: AGTTCTCTCTTGTTTGGAGCAATGCTGAAATTCCAA...GTAGGCAGCCTGCCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAACTCACACACTTAGCTaGCTCTTGGAATTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LKIMKSTRLLPGHRQGDSTHTLS*LLEFQH
Trigger: ATGCTGAAATTCCAAGAGGCAGCTAAGTGTGTGAGT...TGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CCTACTTCACTGCATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTTTGCTCCACAAAACTTaGATGGAACTTGACAATGGC +
Preference number: 4 (lower is better)
Translates to: PTSLHSPHLNGGVGSHAPLLHKT*MELDNG
Trigger: GCCATTGTCAAGTTCCATGCAAGTTTTGTGGAGCAA...AGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR GCA 90 bp AAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGCGAATGCATGATTCATaGAGCACATCTCATACAAAA +
Preference number: 4 (lower is better)
Translates to: KGHVGLLQASKAQPPTGLRMHDS*STSHTK
Trigger: TTTTGTATGAGATGTGCTGCATGAATCATGCATTCG...CAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR GCA 90 bp CTTCACAATAGGAATCAAATGCATCAGCGTAGTACTCTTCAGCCACAAGTGGGTTCTGTCCCCAGCTTCTaGATGGCTGATTCCCTCATG +
Preference number: 4 (lower is better)
Translates to: LHNRNQMHQRSTLQPQVGSVPSF*MADSLM
Trigger: CATGAGGGAATCAGCCATGCAGAAGCTGGGGACAGA...ACCCACTTGTGGCTGAAGAGTACTACGCTGATGCATTTGATTCCTATTGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CTACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGACCTTCACTGGCAGGCTaGCTACAGTCCATGAGACCC +
Preference number: 4 (lower is better)
Translates to: LLSKEASTSDEELKVKMGPSLAG*LQSMRP
Trigger: GGGTCTCATGGACTGTAGGCAGCCTGCCAGTGAAGG...TCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCCACTTAGCTGCCTCTTaGAATTTCAGCATTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RGDIVSHRQPRTVKGMWGHLAAS*NFSIAP
Trigger: TGGAGCAATGCTGAAATTCCAAGAGGCAGCTAAGTG...GCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp CTGCATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTTGTAGACCCTGCAATCAAGGTCTTTaGATAAGTGGAAATGGCTGT +
Preference number: 4 (lower is better)
Translates to: LHSPHLNGGVGSHAPCRPCNQGL*ISGNGC
Trigger: ACAGCCATTTCCACTTATCCAAAGACCTTGATTGCA...GGGTCTACAAGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp TGTAAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTTGCAATCAAGGTCTTTaGATAAGTGGAAATGGCTGT +
Preference number: 4 (lower is better)
Translates to: CKGHVGLLQASKAQPPTGCNQGL*ISGNGC
Trigger: ACAGCCATTTCCACTTATCCAAAGACCTTGATTGCA...ACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp CTTCTGGGCTGTAGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGTGCAATCAAGGTCTTTaGATAAGTGGAAATGGCTGT +
Preference number: 4 (lower is better)
Translates to: LLGCSSACCRLESSDLHWCNQGL*ISGNGC
Trigger: ACAGCCATTTCCACTTATCCAAAGACCTTGATTGCA...CCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCTACAGCCCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCTCCTACAGGGTTGGGCTTCCAAATTaGCCTGTACAGTTTCATTTG +
Preference number: 4 (lower is better)
Translates to: IVSHRQPRTVKGMWGSYRVGLPN*PVQFHL
Trigger: CAAATGAAACTGTACAGGCCAATTTGGAAGCCCAAC...CCTGTAGGAGCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp ACACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCCTGGGTGGTCCAGCTTaGAGAGGAGTTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: THIFLISHGRAKVDQKQVLGGPA*RGVGLP
Trigger: TGGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAG...GACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGACTGGGTGGTCCAGCTTaGAGAGGAGTTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLSKEASTSDEELKVKMGLGGPA*RGVGLP
Trigger: TGGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAG...TCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CCACTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGACTGGGTGGTCCAGCTTaGAGAGGAGTTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PLGHLKRRGDIVSHRQPRLGGPA*RGVGLP
Trigger: TGGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAG...TCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp AGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCTCCACAAAACTTGCATaGAACTTGACAATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RGDIVSHRQPRTVKGMWGSTKLA*NLTMAG
Trigger: CCCAGCCATTGTCAAGTTCCATGCAAGTTTTGTGGA...GCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp CTGGTCAGGATGTGGGTAAGCAGCCAAGGCCTACTTCACTGCATTCTCCACATCCAATGGATAAGAAATTaGAGCCAGCGAATGCATGAT +
Preference number: 4 (lower is better)
Translates to: LVRMWVSSQGLLHCILHIQWIRN*SQRMHD
Trigger: ATCATGCATTCGCTGGCTCCAATTTCTTATCCATTG...GATGTGGAGAATGCAGTGAAGTAGGCCTTGGCTGCTTACCCACATCCTGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp CTTCTGGGCTGTAGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGCAATGGATAAGAAATTaGAGCCAGCGAATGCATGAT +
Preference number: 4 (lower is better)
Translates to: LLGCSSACCRLESSDLHWQWIRN*SQRMHD
Trigger: ATCATGCATTCGCTGGCTCCAATTTCTTATCCATTG...CCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCTACAGCCCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCCCGCATCCTTTCTCTTaGCGTCATTTTCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: RGDIVSHRQPRTVKGMWGPHPFS*RHFLYF
Trigger: GAAGTACAGAAAATGACGCCAAGAGAAAGGATGCGG...GCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp CATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTTGTAGACCCAGGATTGATTCAAGTTCGTaGAGGTCCATGGAAGGAATA +
Preference number: 4 (lower is better)
Translates to: HSPHLNGGVGSHAPCRPRIDSSS*RSMEGI
Trigger: TATTCCTTCCATGGACCTCCACGAACTTGAATCAAT...CCTGGGTCTACAAGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp AGGCATGTCTGGCTTCTGGGCTGTAGCTCAGCATGTTGTAGGCTAGAGTCCAGTATTGATTCAAGTTCGTaGAGGTCCATGGAAGGAATA +
Preference number: 4 (lower is better)
Translates to: RHVWLLGCSSACCRLESSIDSSS*RSMEGI
Trigger: TATTCCTTCCATGGACCTCCACGAACTTGAATCAAT...ACTGGACTCTAGCCTACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTCTGTCCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGATTGATTCAAGTTCGTaGAGGTCCATGGAAGGAATA +
Preference number: 4 (lower is better)
Translates to: LCPPAENNEEHTASPRSSIDSSS*RSMEGI
Trigger: TATTCCTTCCATGGACCTCCACGAACTTGAATCAAT...CGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGGACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAAATTGATTCAAGTTCGTaGAGGTCCATGGAAGGAATA +
Preference number: 4 (lower is better)
Translates to: LLEALRAHMREMLFKGAKIDSSS*RSMEGI
Trigger: TATTCCTTCCATGGACCTCCACGAACTTGAATCAAT...TTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCTTTGGCTTTCTTGTCTaGAACCAGATAGACAGTTCC +
Preference number: 4 (lower is better)
Translates to: EGQKWTKNRSAKTGMSGFFGFLV*NQIDSS
Trigger: GGAACTGTCTATCTGGTTTCAGACAAGAAAGCCAAA...GAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCGAGCCAGCGAATGCATaGTTCATGCAGCACATCTCA +
Preference number: 4 (lower is better)
Translates to: SDEELKVKMGALLLYPFPEPANA*FMQHIS
Trigger: TGAGATGTGCTGCATGAATCATGCATTCGCTGGCTC...GGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GGAGCCAGCGAATGCATGATTCATGCAGCACATCTCATACAAAATGCATGCCAGTCAACACTCAGCTGCTaGAAGTTCCGAGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: GASECMIHAAHLIQNACQSTLSC*KFRDLN
Trigger: ATTGAGATCTCGGAACTTTCAGCAGCTGAGTGTTGA...CTGGCATGCATTTTGTATGAGATGTGCTGCATGAATCATGCATTCGCTGGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTATCCTCGTCCTGGGGTaGACAAGAAAGTCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: LSKEASTSDEELKVKMGAILVLG*TRKSSL
Trigger: GAGGGAAGACTTTCTTGTTCACCCCAGGACGAGGAT...AGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp ATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCATGGAAGGAATAGGCTaGGACTCAGGCAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: ISGYSPNNTYDSKHRQPCMEGIG*DSGRFS
Trigger: AGAGAACCTGCCTGAGTCTCAGCCTATTCCTTCCAT...GCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCTCAGCTTCTGCATGGCTaGTTCCCTCATGCGTTTCAT +
Preference number: 4 (lower is better)
Translates to: SQGIVQITLMTPSIGSHAQLLHG*FPHAFH
Trigger: ATGAAACGCATGAGGGAATCAGCCATGCAGAAGCTG...AGCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GAACTTCTGCTTCTTTTTGATAGTTGCCTAGAGATGGTTCTGGAGAGTAGGTTCGCTTCGCTAGCATTCTaGTGCCTTGCTCTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: ELLLLFDSCLEMVLESRFASLAF*CLALLR
Trigger: CCTCAAGAGAGCAAGGCATCAGAATGCTAGCGAAGC...GAACCTACTCTCCAGAACCATCTCTAGGCAACTATCAAAAAGAAGCAGAAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCCAAGGGAGCCAAACTTaGTCTATAAGCTTATCTCAG +
Preference number: 4 (lower is better)
Translates to: EGQKWTKNRSAKTGMSGFQGSQT*SISLSQ
Trigger: CTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTG...GAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp GAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCTTGCTCCACAAAACTTaGATGGAACTTGACAATGGC +
Preference number: 4 (lower is better)
Translates to: EGQKWTKNRSAKTGMSGFLLHKT*MELDNG
Trigger: GCCATTGTCAAGTTCCATGCAAGTTTTGTGGAGCAA...GAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp GGCGTCATTTTCTGTACTTCTGACAGTGCCCTCAGAGTCTGCAGGTGGATCCTTACATCTCATACAAAATaGATGCCAGTGACCAGATGT +
Preference number: 4 (lower is better)
Translates to: GVIFCTSDSALRVCRWILTSHTK*MPVTRC
Trigger: ACATCTGGTCACTGGCATGCATTTTGTATGAGATGT...AAGGATCCACCTGCAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATGACGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCTATTGGAGCCAGCGAATaGATGATTCATGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: KGKSGPKTGQLRQACLASIGASE*MIHAAH
Trigger: ATGTGCTGCATGAATCATGCATTCGCTGGCTCCAAT...AGAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp GTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGAGCTATCTCCGAGATCTCAATTCTTaGATTCGTTTGCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: VGLLQASKAQPPTGLSYLRDLNS*IRLLFS
Trigger: AGAAAATAGCAAACGAATGCAAGAATTGAGATCTCG...GAGATAGCTCAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR GCA 90 bp CTTCTGGGCTGTAGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGACAATAGGAATCAAATaGATCAGCGTAGTACTCTTC +
Preference number: 4 (lower is better)
Translates to: LLGCSSACCRLESSDLHWTIGIK*ISVVLF
Trigger: GAAGAGTACTACGCTGATGCATTTGATTCCTATTGT...CCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCTACAGCCCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAACTTCTTCTTTTTGATAGTTaGCTAGAGATGGTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LEALRAHMREMLFKGAKLLLFDS*LEMVLE
Trigger: CTCCAGAACCATCTCTAGGCAACTATCAAAAAGAAG...AAGTTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTGAACTTGACAATGGCTaGGTGGTCCAGCTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SQDGSSAFVSIPHNRVQLELDNG*VVQLGE
Trigger: CTCTCCAAGCTGGACCACCCAGCCATTGTCAAGTTC...AAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TTGGCGTCATTTTCTGTACTTCTGACAGTGCCCTCAGAGTCTGCAGGTGGATCCACTCCCAGCAGCAGCTaGATAAACCATTCTATTATT +
Preference number: 4 (lower is better)
Translates to: LASFSVLLTVPSESAGGSTPSSS*INHSII
Trigger: AATAATAGAATGGTTTATCCAGCTGCTGCTGGGAGT...GGATCCACCTGCAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATGACGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAACTCCCAGCAGCAGCTaGATAAACCATTCTATTATT +
Preference number: 4 (lower is better)
Translates to: LKIMKSTRLLPGHRQGDSTPSSS*INHSII
Trigger: AATAATAGAATGGTTTATCCAGCTGCTGCTGGGAGT...TGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGGTCAGCTAAGACAGGCATGTCTGGCTTCTGGGCTGTAGCTCAGCATGTTGTACAATGGATAAGAAATTaGAGCCAGCGAATGCATGAT +
Preference number: 4 (lower is better)
Translates to: RSAKTGMSGFWAVAQHVVQWIRN*SQRMHD
Trigger: ATCATGCATTCGCTGGCTCCAATTTCTTATCCATTG...TACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCTGTCTTAGCTGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CCTACTTCACTGCATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTCAATGGATAAGAAATTaGAGCCAGCGAATGCATGAT +
Preference number: 4 (lower is better)
Translates to: PTSLHSPHLNGGVGSHAPQWIRN*SQRMHD
Trigger: ATCATGCATTCGCTGGCTCCAATTTCTTATCCATTG...AGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp TTGGCGTCATTTTCTGTACTTCTGACAGTGCCCTCAGAGTCTGCAGGTGGATCCCAATGGATAAGAAATTaGAGCCAGCGAATGCATGAT +
Preference number: 4 (lower is better)
Translates to: LASFSVLLTVPSESAGGSQWIRN*SQRMHD
Trigger: ATCATGCATTCGCTGGCTCCAATTTCTTATCCATTG...GGATCCACCTGCAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATGACGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TTTCCACTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCTTCTCATCAGCCGCCTaGAGCTTCCTCAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: FPLGHLKRRGDIVSHRQPFSSAA*SFLSRI
Trigger: GATGCGGCTGAGGAAGCTCCAGGCGGCTGATGAGAA...GGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAGTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp ATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCTCCTACAGGAAATTCATCCAGTGTTaGTCAGTTCAGACTTTCCAG +
Preference number: 4 (lower is better)
Translates to: IVSHRQPRTVKGMWGSYRKFIQC*SVQTFQ
Trigger: CTGGAAAGTCTGAACTGACCAACACTGGATGAATTT...CCTGTAGGAGCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511262.5
CDS-3UTR CCA 90 bp CAAACACCTGGCCAACGCTTCGATATCACTGTCCTGTTGGTTTGTTCTGTAAGCTCTTCTGGGATCTCATaGTATCCAAGGTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: QTPGQRFDITVLLVCSVSSSGIS*YPRSDV
Trigger: CACATCTGACCTTGGATACCATGAGATCCCAGAAGA...GCTTACAGAACAAACCAACAGGACAGTGATATCGAAGCGTTGGCCAGGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTTCCCCAGCTTCTGCATaGCTGATTCCCTCATGCGTT +
Preference number: 4 (lower is better)
Translates to: SQDGSSAFVSIPHNRVQLSPASA*LIPSCV
Trigger: AACGCATGAGGGAATCAGCCATGCAGAAGCTGGGGA...AAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGAAATTGGAGCCAGCGAATGCATGATTCATGCAGCACATCTCATACAAAATGCTCCCCAGCTTCTGCATaGCTGATTCCCTCATGCGTT +
Preference number: 4 (lower is better)
Translates to: RNWSQRMHDSCSTSHTKCSPASA*LIPSCV
Trigger: AACGCATGAGGGAATCAGCCATGCAGAAGCTGGGGA...GCATTTTGTATGAGATGTGCTGCATGAATCATGCATTCGCTGGCTCCAATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGAACTTGCATGGAACTTaGCAATGGCTGGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SKEASTSDEELKVKMGALNLHGT*QWLGGP
Trigger: TGGACCACCCAGCCATTGTCAAGTTCCATGCAAGTT...CAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGAGCCAGCGAATGCATaGTTCATGCAGCACATCTCA +
Preference number: 4 (lower is better)
Translates to: SLLVMEGQKWTKNRSAKTEPANA*FMQHIS
Trigger: TGAGATGTGCTGCATGAATCATGCATTCGCTGGCTC...TGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAATCCTCGTCCTGGGGTaGACAAGAAAGTCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GIESQDGSSAFVSIPHNRILVLG*TRKSSL
Trigger: GAGGGAAGACTTTCTTGTTCACCCCAGGACGAGGAT...TCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCGGCATCCTCTACAATTaGTTCAAGTTCGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SDEELKVKMGALLLYPFPGILYN*FKFVEV
Trigger: GACCTCCACGAACTTGAATCAATTGTAGAGGATGCC...GGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTCAGCCATGGTGGTaGTGGTCTTTGTGTCTAGAG +
Preference number: 4 (lower is better)
Translates to: SKEASTSDEELKVKMGALLQPWW*WSLCLE
Trigger: CTCTAGACACAAAGACCATCACCACCATGGCTGAAG...CAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp ACTCTCTTCACAATAGGAATCAAATGCATCAGCGTAGTACTCTTCAGCCACAAGCAGCTTCTGCATGGCTaGTTCCCTCATGCGTTTCAT +
Preference number: 4 (lower is better)
Translates to: TLFTIGIKCISVVLFSHKQLLHG*FPHAFH
Trigger: ATGAAACGCATGAGGGAATCAGCCATGCAGAAGCTG...CTTGTGGCTGAAGAGTACTACGCTGATGCATTTGATTCCTATTGTGAAGAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCAGCTTCGCTAGCATTCTaGTGCCTTGCTCTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: STSDEELKVKMGALLLYPASLAF*CLALLR
Trigger: CCTCAAGAGAGCAAGGCATCAGAATGCTAGCGAAGC...TGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TGCTTCGCTAGCATTCTGATGCCTTGCTCTCTTGAGGTAATTATAGACCTCTTCAAACAGTCGCTGGCTTaGGGCACCACTTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: CFASILMPCSLEVIIDLFKQSLA*GTTFSK
Trigger: TTTGGAAAAAGTGGTGCCTCAAGCCAGCGACTGTTT...GAAGAGGTCTATAATTACCTCAAGAGAGCAAGGCATCAGAATGCTAGCGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATATGTTAAACGGTCATCGTCAGGGTaGCTCAATCCTGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: GALLLYPFPIIEFSLYVKRSSSG*LNPAGS
Trigger: GCTTCCAGCAGGATTGAGTCACCCTGACGATGACCG...TTTAACATATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AGCTCTGTCCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGAATGCATGATTCATaGAGCACATCTCATACAAAA +
Preference number: 4 (lower is better)
Translates to: SSVLQLKIMKSTRLLPGHRMHDS*STSHTK
Trigger: TTTTGTATGAGATGTGCTGCATGAATCATGCATTCG...ATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGGACAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTTGTAGACCCAGGCGAGATCTCAATTCTTaGATTCGTTTGCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: HSPHLNGGVGSHAPCRPRRDLNS*IRLLFS
Trigger: AGAAAATAGCAAACGAATGCAAGAATTGAGATCTCG...CCTGGGTCTACAAGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR GCA 90 bp ACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCTCTGTCCCCAGCTTCTaGATGGCTGATTCCCTCATG +
Preference number: 4 (lower is better)
Translates to: TSDEELKVKMGALLLYPFSVPSF*MADSLM
Trigger: CATGAGGGAATCAGCCATGCAGAAGCTGGGGACAGA...GAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AGGTCAGCTAAGACAGGCATGTCTGGCTTCTGGGCTGTAGCTCAGCATGTTGTAAGCATTCTGATGCCTTaGTCTCTTGAGGTAATTATA +
Preference number: 4 (lower is better)
Translates to: RSAKTGMSGFWAVAQHVVSILMP*SLEVII
Trigger: TATAATTACCTCAAGAGAGCAAGGCATCAGAATGCT...TACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCTGTCTTAGCTGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTACACTCGCGGATCTCTaGTTCGCTAGCATTCTGATG +
Preference number: 4 (lower is better)
Translates to: SQDGSSAFVSIPHNRVQLTLADL*FASILM
Trigger: CATCAGAATGCTAGCGAAGCAGAGATCCGCGAGTGT...AAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp GAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCGTCCACTTGAACTTCTaGTTCTTTTTGATAGTTGCC +
Preference number: 4 (lower is better)
Translates to: EGQKWTKNRSAKTGMSGFVHLNF*FFLIVA
Trigger: GGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGGAC...GAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp GAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCAAGCATAGGCAGCCATaGTTACTACTCTCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: EGQKWTKNRSAKTGMSGFKHRQP*LLLSKE
Trigger: TTCTTTAGAGAGTAGTAAGCATGGCTGCCTATGCTT...GAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp TATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCCTTCACTGGCAGGCTaGCTACAGTCCATGAGACCC +
Preference number: 4 (lower is better)
Translates to: YKLISGYSPNNTYDSKHRPSLAG*LQSMRP
Trigger: GGGTCTCATGGACTGTAGGCAGCCTGCCAGTGAAGG...CCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AAGTGGGTCTTCTGGGATCTCATGGTATCCAAGGTCAGATGTGGCATCCTCTACTGCAATCAAGGTCTTTaGATAAGTGGAAATGGCTGT +
Preference number: 4 (lower is better)
Translates to: KWVFWDLMVSKVRCGILYCNQGL*ISGNGC
Trigger: ACAGCCATTTCCACTTATCCAAAGACCTTGATTGCA...GTAGAGGATGCCACATCTGACCTTGGATACCATGAGATCCCAGAAGACCCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CAAACACCTGGCCAACGCTTCGATATCACTGTCCTGTTGGTTTGTTCTGTAAGCGTTGGGCTTCCAAATTaGCCTGTACAGTTTCATTTG +
Preference number: 4 (lower is better)
Translates to: QTPGQRFDITVLLVCSVSVGLPN*PVQFHL
Trigger: CAAATGAAACTGTACAGGCCAATTTGGAAGCCCAAC...GCTTACAGAACAAACCAACAGGACAGTGATATCGAAGCGTTGGCCAGGTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514915.5
CDS-3UTR CCA 90 bp ACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCTTGACAATGGCTGGGTaGTCCAGCTTGGAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: TSDEELKVKMGALLLYPFLTMAG*SSLERS
Trigger: ACTCCTCTCCAAGCTGGACCACCCAGCCATTGTCAA...GAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp GAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATATTGACAATGGCTGGGTaGTCCAGCTTGGAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: EELKVKMGALLLYPFPIILTMAG*SSLERS
Trigger: ACTCCTCTCCAAGCTGGACCACCCAGCCATTGTCAA...TATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCAGAACTTGACAATGGCTaGGTGGTCCAGCTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: STSDEELKVKMGALLLYPELDNG*VVQLGE
Trigger: CTCTCCAAGCTGGACCACCCAGCCATTGTCAAGTTC...TGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCTTCCAGTTAAAGTTGTaGCCAGGTCACAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: SDEELKVKMGALLLYPFPFQLKL*PGHRIP
Trigger: TGGGATCCTGTGACCTGGCCACAACTTTAACTGGAA...GGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTGGGATCTCATGGTATCCAAGGTCAGATGTGGCATCCTCTACAATTGATTCAATTCCAGTTAAAGTTGTaGCCAGGTCACAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: LGSHGIQGQMWHPLQLIQFQLKL*PGHRIP
Trigger: TGGGATCCTGTGACCTGGCCACAACTTTAACTGGAA...TTGAATCAATTGTAGAGGATGCCACATCTGACCTTGGATACCATGAGATCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCCACAAGTGGGTCTTCTaGGATCTCATGGTATCCAAG +
Preference number: 4 (lower is better)
Translates to: SDEELKVKMGALLLYPFPHKWVF*DLMVSK
Trigger: CTTGGATACCATGAGATCCCAGAAGACCCACTTGTG...GGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CATGGTATCCAAGGTCAGATGTGGCATCCTCTACAATTGATTCAAGTTCGTGGAGAAAATTGGTGGTCCTaGGGACATGTCTTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: HGIQGQMWHPLQLIQVRGENWWS*GHVFSH
Trigger: ATGGCTGAAGACATGTCCCCAGGACCACCAATTTTC...TCCACGAACTTGAATCAATTGTAGAGGATGCCACATCTGACCTTGGATACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCTCATGCGTTTCATCTTaGTCCTGGCCATCACACTGT +
Preference number: 4 (lower is better)
Translates to: SDEELKVKMGALLLYPFPSCVSS*SWPSHC
Trigger: ACAGTGTGATGGCCAGGACCAAGATGAAACGCATGA...GGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATAACTTGCATGGAACTTaGCAATGGCTGGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LSQGIVQITLMTPSIGSHNLHGT*QWLGGP
Trigger: TGGACCACCCAGCCATTGTCAAGTTCCATGCAAGTT...ATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CCACTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAGAGCCAGCGAATGCATaGTTCATGCAGCACATCTCA +
Preference number: 4 (lower is better)
Translates to: PLGHLKRRGDIVSHRQPREPANA*FMQHIS
Trigger: TGAGATGTGCTGCATGAATCATGCATTCGCTGGCTC...TCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp AGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTCATTTTCTGTACTTCTaGCAGTGCCCTCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: SQDGSSAFVSIPHNRVQLHFLYF*QCPQSL
Trigger: CAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATG...AAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TACACACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGATCCTCGTCCTGGGGTaGACAAGAAAGTCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: YTHIFLISHGRAKVDQKQILVLG*TRKSSL
Trigger: GAGGGAAGACTTTCTTGTTCACCCCAGGACGAGGAT...CTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATATGGAAGGAATAGGCTaGGACTCAGGCAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LSQGIVQITLMTPSIGSHMEGIG*DSGRFS
Trigger: AGAGAACCTGCCTGAGTCTCAGCCTATTCCTTCCAT...ATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGACTTCAGCCATGGTGGTaGTGGTCTTTGTGTCTAGAG +
Preference number: 4 (lower is better)
Translates to: GIESQDGSSAFVSIPHNRLQPWW*WSLCLE
Trigger: CTCTAGACACAAAGACCATCACCACCATGGCTGAAG...TCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp ACTCTCTTCACAATAGGAATCAAATGCATCAGCGTAGTACTCTTCAGCCACAAGAAACAGTCGCTGGCTTaGGGCACCACTTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: TLFTIGIKCISVVLFSHKKQSLA*GTTFSK
Trigger: TTTGGAAAAAGTGGTGCCTCAAGCCAGCGACTGTTT...CTTGTGGCTGAAGAGTACTACGCTGATGCATTTGATTCCTATTGTGAAGAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCGTTCTTTTCCCATCGTaGTCAGCAACTGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SDEELKVKMGALLLYPFPVLFPS*SATALQ
Trigger: TTGAAGAGCAGTTGCTGATCACGATGGGAAAAGAAC...GGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCTACATCTCATACAAAATaGATGCCAGTGACCAGATGT +
Preference number: 4 (lower is better)
Translates to: KGKSGPKTGQLRQACLASTSHTK*MPVTRC
Trigger: ACATCTGGTCACTGGCATGCATTTTGTATGAGATGT...AGAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp GAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCCGAATGCATGATTCATaGAGCACATCTCATACAAAA +
Preference number: 4 (lower is better)
Translates to: EGQKWTKNRSAKTGMSGFRMHDS*STSHTK
Trigger: TTTTGTATGAGATGTGCTGCATGAATCATGCATTCG...GAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AAAGTACAGGAGCTGGTCCACTTCAAAACAGTCGCTGGCTTGAGGCACCACTTTACAATAGGAATCAAATaGATCAGCGTAGTACTCTTC +
Preference number: 4 (lower is better)
Translates to: KVQELVHFKTVAGLRHHFTIGIK*ISVVLF
Trigger: GAAGAGTACTACGCTGATGCATTTGATTCCTATTGT...AAAGTGGTGCCTCAAGCCAGCGACTGTTTTGAAGTGGACCAGCTCCTGTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR GCA 90 bp GAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCAGCATTCTGATGCCTTaGTCTCTTGAGGTAATTATA +
Preference number: 4 (lower is better)
Translates to: EGQKWTKNRSAKTGMSGFSILMP*SLEVII
Trigger: TATAATTACCTCAAGAGAGCAAGGCATCAGAATGCT...GAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATAACACTCGCGGATCTCTaGTTCGCTAGCATTCTGATG +
Preference number: 4 (lower is better)
Translates to: QDGSSAFVSIPHNRVQLITLADL*FASILM
Trigger: CATCAGAATGCTAGCGAAGCAGAGATCCGCGAGTGT...TATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp ACACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCACACTCGCGGATCTCTaGTTCGCTAGCATTCTGATG +
Preference number: 4 (lower is better)
Translates to: THIFLISHGRAKVDQKQVTLADL*FASILM
Trigger: CATCAGAATGCTAGCGAAGCAGAGATCCGCGAGTGT...GACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CTACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAACACTCGCGGATCTCTaGTTCGCTAGCATTCTGATG +
Preference number: 4 (lower is better)
Translates to: LLSKEASTSDEELKVKMGTLADL*FASILM
Trigger: CATCAGAATGCTAGCGAAGCAGAGATCCGCGAGTGT...TCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp GTTCATCAGATTCATGGAGTACATCAACACTCAGCTGCTGAAAGTTCCGAGATCATCGTGATCAGCAACTaGTCTTCAAAGTACAGGAGC +
Preference number: 4 (lower is better)
Translates to: VHQIHGVHQHSAAESSEIIVISN*SSKYRS
Trigger: GCTCCTGTACTTTGAAGAGCAGTTGCTGATCACGAT...GATCTCGGAACTTTCAGCAGCTGAGTGTTGATGTACTCCATGAATCTGATGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510474.5
CDS-3UTR CCA 90 bp TTTCCACTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCTTGACAATGGCTGGGTaGTCCAGCTTGGAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: FPLGHLKRRGDIVSHRQPLTMAG*SSLERS
Trigger: ACTCCTCTCCAAGCTGGACCACCCAGCCATTGTCAA...GGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAGTGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp AAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCTCAATGGATAAGAAATTaGAGCCAGCGAATGCATGAT +
Preference number: 4 (lower is better)
Translates to: KGKSGPKTGQLRQACLASQWIRN*SQRMHD
Trigger: ATCATGCATTCGCTGGCTCCAATTTCTTATCCATTG...AGAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCCCGCATCCTTTCTCTTaGCGTCATTTTCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: LLVMEGQKWTKNRSAKTGPHPFS*RHFLYF
Trigger: GAAGTACAGAAAATGACGCCAAGAGAAAGGATGCGG...GCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCCCGCATCCTTTCTCTTaGCGTCATTTTCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: ISGYSPNNTYDSKHRQPCPHPFS*RHFLYF
Trigger: GAAGTACAGAAAATGACGCCAAGAGAAAGGATGCGG...GCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATTAATTATATGAGCAGCCTCCTTCTGACAATCCAAATTTTTGTCTTCCAGAGTTTCTCATCAGCCGCCTaGAGCTTCCTCAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: INYMSSLLLTIQIFVFQSFSSAA*SFLSRI
Trigger: GATGCGGCTGAGGAAGCTCCAGGCGGCTGATGAGAA...ACTCTGGAAGACAAAAATTTGGATTGTCAGAAGGAGGCTGCTCATATAATTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATTTCTCATCAGCCGCCTaGAGCTTCCTCAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: IYKLISGYSPNNTYDSKHFSSAA*SFLSRI
Trigger: GATGCGGCTGAGGAAGCTCCAGGCGGCTGATGAGAA...ATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCTTCTTCATCCTCGTCCTaGGGTGAACAAGAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: SQGIVQITLMTPSIGSHASSSSS*GEQESL
Trigger: AAGACTTTCTTGTTCACCCCAGGACGAGGATGAAGA...AGCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCTCTTCATCCTCGTCCTaGGGTGAACAAGAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: ISGYSPNNTYDSKHRQPCSSSSS*GEQESL
Trigger: AAGACTTTCTTGTTCACCCCAGGACGAGGATGAAGA...GCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTTCCACATCTGAATGGTaGGGTAGGGAGTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: LGHLKRRGDIVSHRQPRTSTSEW*GRESCS
Trigger: GGAGCATGACTCCCTACCCCACCATTCAGATGTGGA...AGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp TCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCACTGTTGAAAATTGGTaGTCCTGGGGACATGTCTTC +
Preference number: 4 (lower is better)
Translates to: SDEELKVKMGALLLYPFPTVENW*SWGHVF
Trigger: GAAGACATGTCCCCAGGACCACCAATTTTCAACAGT...GGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCACTGTTGAAAATTGGTaGTCCTGGGGACATGTCTTC +
Preference number: 4 (lower is better)
Translates to: ISGYSPNNTYDSKHRQPCTVENW*SWGHVF
Trigger: GAAGACATGTCCCCAGGACCACCAATTTTCAACAGT...GCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCTCTTCAAAACAGTCGCTaGCTTGAGGCACCACTTTTT +
Preference number: 4 (lower is better)
Translates to: SQGIVQITLMTPSIGSHALQNSR*LEAPLF
Trigger: AAAAAGTGGTGCCTCAAGCCAGCGACTGTTTTGAAG...AGCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CATGGTATCCAAGGTCAGATGTGGCATCCTCTACAATTGATTCAAGTTCGTGGACTTCAAAACAGTCGCTaGCTTGAGGCACCACTTTTT +
Preference number: 4 (lower is better)
Translates to: HGIQGQMWHPLQLIQVRGLQNSR*LEAPLF
Trigger: AAAAAGTGGTGCCTCAAGCCAGCGACTGTTTTGAAG...TCCACGAACTTGAATCAATTGTAGAGGATGCCACATCTGACCTTGGATACCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATTTGTCCACTTGAACTTCTGCTTCTTTTTGATAGTTGCCTAGAGATGGTTCTGGGCATGTCTGGCTTCTaGGCTGTAGCTCAGCATGTT +
Preference number: 4 (lower is better)
Translates to: ICPLELLLLFDSCLEMVLGMSGF*AVAQHV
Trigger: AACATGCTGAGCTACAGCCCAGAAGCCAGACATGCC...CAGAACCATCTCTAGGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGGACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATGGAAGGGCAAAAGTaGACCAAAAACAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: SDEELKVKMGALLLYPFPMEGQK*TKNRSA
Trigger: AGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCAT...GGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TGCTTCGCTAGCATTCTGATGCCTTGCTCTCTTGAGGTAATTATAGACCTCTTCATGGAAGGGCAAAAGTaGACCAAAAACAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: CFASILMPCSLEVIIDLFMEGQK*TKNRSA
Trigger: AGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCAT...GAAGAGGTCTATAATTACCTCAAGAGAGCAAGGCATCAGAATGCTAGCGAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514915.5
CDS-3UTR TCA 90 bp GAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAAGTGGAAATGGCTGTTaGTCCACTCACACACTTAGC +
Preference number: 4 (lower is better)
Translates to: EELKVKMGALLLYPFPIISGNGC*STHTLS
Trigger: GCTAAGTGTGTGAGTGGATCAACAGCCATTTCCACT...TATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CTGGGATCTCATGGTATCCAAGGTCAGATGTGGCATCCTCTACAATTGATTCAACTGCCAAGTTTTTGTTaGAGCACGTATCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: LGSHGIQGQMWHPLQLIQLPSFC*STYLLA
Trigger: TGCAAGAAGATACGTGCTTCAACAAAAACTTGGCAG...TTGAATCAATTGTAGAGGATGCCACATCTGACCTTGGATACCATGAGATCCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR TCA 90 bp ATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCCTGCCAAGTTTTTGTTaGAGCACGTATCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: ISGYSPNNTYDSKHRQPCLPSFC*STYLLA
Trigger: TGCAAGAAGATACGTGCTTCAACAAAAACTTGGCAG...GCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCTCTGCCAAGTTTTTGTTaGAGCACGTATCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: SQGIVQITLMTPSIGSHALPSFC*STYLLA
Trigger: TGCAAGAAGATACGTGCTTCAACAAAAACTTGGCAG...AGCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCTTTGGCTTTCTTGTCTaGAACCAGATAGACAGTTCC +
Preference number: 4 (lower is better)
Translates to: LLVMEGQKWTKNRSAKTGFGFLV*NQIDSS
Trigger: GGAACTGTCTATCTGGTTTCAGACAAGAAAGCCAAA...GCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGACTTTAAGTCTCGATaGAGTATCCTCCTCTCATGC +
Preference number: 4 (lower is better)
Translates to: SLLVMEGQKWTKNRSAKTDFKSR*SILLSC
Trigger: GCATGAGAGGAGGATACTTCATCGAGACTTAAAGTC...TGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CTACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGACATTTTCTGTACTTCTaGCAGTGCCCTCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: LLSKEASTSDEELKVKMGHFLYF*QCPQSL
Trigger: CAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATG...TCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGATCCTCGTCCTGGGGTaGACAAGAAAGTCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: HLKRRGDIVSHRQPRTVKILVLG*TRKSSL
Trigger: GAGGGAAGACTTTCTTGTTCACCCCAGGACGAGGAT...CTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp TTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGGCATCCTCTACAATTaGTTCAAGTTCGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: LSQGIVQITLMTPSIGSHGILYN*FKFVEV
Trigger: GACCTCCACGAACTTGAATCAATTGTAGAGGATGCC...ATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGGTCTGAGCTATCTCTaGGCATTGGGCTCAGTGATT +
Preference number: 4 (lower is better)
Translates to: LGHLKRRGDIVSHRQPRTGLSYL*ALGSVI
Trigger: AATCACTGAGCCCAATGCTCAGAGATAGCTCAGACC...AGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp CAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATAAAACAGTCGCTGGCTTaGGGCACCACTTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: QDGSSAFVSIPHNRVQLIKQSLA*GTTFSK
Trigger: TTTGGAAAAAGTGGTGCCTCAAGCCAGCGACTGTTT...TATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACACTTCTGATGAGGAATTaGAAGTCAAGATGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SLLVMEGQKWTKNRSAKTLLMRN*KSRWEL
Trigger: GAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAG...TGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp ATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCACTCACACACTTAGCTaGCTCTTGGAATTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: ISGYSPNNTYDSKHRQPCTHTLS*LLEFQH
Trigger: ATGCTGAAATTCCAAGAGGCAGCTAAGTGTGTGAGT...GCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCTAAGCACGTATCTTCTTaGAATCAAGGTCTTTGGATA +
Preference number: 4 (lower is better)
Translates to: KGKSGPKTGQLRQACLASKHVSS*NQGLWI
Trigger: TATCCAAAGACCTTGATTGCAAGAAGATACGTGCTT...AGAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp GGAGCCAGCGAATGCATGATTCATGCAGCACATCTCATACAAAATGCATGCCAGACAATAGGAATCAAATaGATCAGCGTAGTACTCTTC +
Preference number: 4 (lower is better)
Translates to: GASECMIHAAHLIQNACQTIGIK*ISVVLF
Trigger: GAAGAGTACTACGCTGATGCATTTGATTCCTATTGT...CTGGCATGCATTTTGTATGAGATGTGCTGCATGAATCATGCATTCGCTGGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR GCA 90 bp TCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCTTTGTGTCTAGAGAAGTaGAACCCAGGACATTTTCCA +
Preference number: 4 (lower is better)
Translates to: SQGIVQITLMTPSIGSHALCLEK*NPGHFP
Trigger: TGGAAAATGTCCTGGGTTGCACTTCTCTAGACACAA...AGCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp TCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCTTGTGTCTAGAGAAGTaGAACCCAGGACATTTTCCA +
Preference number: 4 (lower is better)
Translates to: SDEELKVKMGALLLYPFPLCLEK*NPGHFP
Trigger: TGGAAAATGTCCTGGGTTGCACTTCTCTAGACACAA...GGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTACACTCGCGGATCTCTaGTTCGCTAGCATTCTGATG +
Preference number: 4 (lower is better)
Translates to: REPNLIYKLISGYSPNNTTLADL*FASILM
Trigger: CATCAGAATGCTAGCGAAGCAGAGATCCGCGAGTGT...AGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp TCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAATCGTGATCAGCAACTaGTCTTCAAAGTACAGGAGC +
Preference number: 4 (lower is better)
Translates to: SLLVMEGQKWTKNRSAKTIVISN*SSKYRS
Trigger: GCTCCTGTACTTTGAAGAGCAGTTGCTGATCACGAT...TGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTTCACAATAGGAATCAAATGCATCAGCGTAGTACTCTTCAGCCACAAGTGGGTTTGGATAAGTGGAAATaGCTGTTGATCCACTCACAC +
Preference number: 4 (lower is better)
Translates to: LHNRNQMHQRSTLQPQVGLDKWK*LLIHSH
Trigger: GTGTGAGTGGATCAACAGCCATTTCCACTTATCCAA...ACCCACTTGTGGCTGAAGAGTACTACGCTGATGCATTTGATTCCTATTGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTGGGATCTCATGGTATCCAAGGTCAGATGTGGCATCCTCTACAATTGATTCAAAGGTCTTTGGATAAGTaGAAATGGCTGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: LGSHGIQGQMWHPLQLIQRSLDK*KWLLIH
Trigger: GTGGATCAACAGCCATTTCCACTTATCCAAAGACCT...TTGAATCAATTGTAGAGGATGCCACATCTGACCTTGGATACCATGAGATCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCAGGTCTTTGGATAAGTaGAAATGGCTGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: ISGYSPNNTYDSKHRQPCRSLDK*KWLLIH
Trigger: GTGGATCAACAGCCATTTCCACTTATCCAAAGACCT...GCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCGTTGGGCTTCCAAATTaGCCTGTACAGTTTCATTTG +
Preference number: 4 (lower is better)
Translates to: SDEELKVKMGALLLYPFPVGLPN*PVQFHL
Trigger: CAAATGAAACTGTACAGGCCAATTTGGAAGCCCAAC...GGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCCGCATCCTTTCTCTTaGCGTCATTTTCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: SKEASTSDEELKVKMGALPHPFS*RHFLYF
Trigger: GAAGTACAGAAAATGACGCCAAGAGAAAGGATGCGG...CAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTTTCTCCACATCTGAATaGTGGGGTAGGGAGTCATGC +
Preference number: 4 (lower is better)
Translates to: LGHLKRRGDIVSHRQPRTFSTSE*WGRESC
Trigger: GCATGACTCCCTACCCCACCATTCAGATGTGGAGAA...AGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp ACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCACAAGTGGGTCTTCTaGGATCTCATGGTATCCAAG +
Preference number: 4 (lower is better)
Translates to: TSDEELKVKMGALLLYPFHKWVF*DLMVSK
Trigger: CTTGGATACCATGAGATCCCAGAAGACCCACTTGTG...GAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTCTCTTCAGCCACAAGTaGGTCTTCTGGGATCTCATG +
Preference number: 4 (lower is better)
Translates to: REPNLIYKLISGYSPNNTLFSHK*VFWDLM
Trigger: CATGAGATCCCAGAAGACCCACTTGTGGCTGAAGAG...AGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGAAATTGGAGCCAGCGAATGCATGATTCATGCAGCACATCTCATACAAAATGCCATTTTCCAAACACCTaGCCAACGCTTCGATATCAC +
Preference number: 4 (lower is better)
Translates to: RNWSQRMHDSCSTSHTKCHFPNT*PTLRYH
Trigger: GTGATATCGAAGCGTTGGCCAGGTGTTTGGAAAATG...GCATTTTGTATGAGATGTGCTGCATGAATCATGCATTCGCTGGCTCCAATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCAGAAAATTGGTGGTCCTaGGGACATGTCTTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: STSDEELKVKMGALLLYPENWWS*GHVFSH
Trigger: ATGGCTGAAGACATGTCCCCAGGACCACCAATTTTC...TGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp GGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGAAAATTGGTGGTCCTaGGGACATGTCTTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: GIESQDGSSAFVSIPHNRENWWS*GHVFSH
Trigger: ATGGCTGAAGACATGTCCCCAGGACCACCAATTTTC...TCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGACTGTTGAAAATTGGTaGTCCTGGGGACATGTCTTC +
Preference number: 4 (lower is better)
Translates to: SKEASTSDEELKVKMGALTVENW*SWGHVF
Trigger: GAAGACATGTCCCCAGGACCACCAATTTTCAACAGT...CAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAACTGTTGAAAATTGGTaGTCCTGGGGACATGTCTTC +
Preference number: 4 (lower is better)
Translates to: SLLVMEGQKWTKNRSAKTTVENW*SWGHVF
Trigger: GAAGACATGTCCCCAGGACCACCAATTTTCAACAGT...TGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000383366.9
ENST00000514915.5
CDS-3UTR CCA 90 bp CACTCAGCTGCTGAAAGTTCCGAGATCTCAATTCTTGCATTCGTTTGCTATTTTCACACTGTTGAAAATTaGTGGTCCTGGGGACATGTC +
Preference number: 4 (lower is better)
Translates to: HSAAESSEISILAFVCYFHTVEN*WSWGHV
Trigger: GACATGTCCCCAGGACCACCAATTTTCAACAGTGTG...AAAATAGCAAACGAATGCAAGAATTGAGATCTCGGAACTTTCAGCAGCTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTAGTGGAAATGGCTGTTaGTCCACTCACACACTTAGC +
Preference number: 4 (lower is better)
Translates to: REPNLIYKLISGYSPNNTSGNGC*STHTLS
Trigger: GCTAAGTGTGTGAGTGGATCAACAGCCATTTCCACT...AGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GTGTGTATGAAATACACACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGAGCCAGCGAATGCATaGTTCATGCAGCACATCTCA +
Preference number: 4 (lower is better)
Translates to: VCMKYTHIFLISHGRAKVEPANA*FMQHIS
Trigger: TGAGATGTGCTGCATGAATCATGCATTCGCTGGCTC...CACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTGTGTATTTCATACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TTTCCACTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCCATTTTCTGTACTTCTaGCAGTGCCCTCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: FPLGHLKRRGDIVSHRQPHFLYF*QCPQSL
Trigger: CAGACTCTGAGGGCACTGTCAGAAGTACAGAAAATG...GGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAGTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp TTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATTCAACACTCAGCTGCTaGAAGTTCCGAGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: LSQGIVQITLMTPSIGSHSTLSC*KFRDLN
Trigger: ATTGAGATCTCGGAACTTTCAGCAGCTGAGTGTTGA...ATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGTGGCTGAACAGGAAATaGAGAGGTGACAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: HLKRRGDIVSHRQPRTVKWLNRK*RGDSWS
Trigger: TGACCAGCTGTCACCTCTTCATTTCCTGTTCAGCCA...CTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp AAATGCTTTTCAAGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTCTTCAGCCATGGTGGTaGTGGTCTTTGTGTCTAGAG +
Preference number: 4 (lower is better)
Translates to: KCFSREPNLIYKLISGYSLQPWW*WSLCLE
Trigger: CTCTAGACACAAAGACCATCACCACCATGGCTGAAG...ACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTGAAAAGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGGATGCCTTGCTCTCTTaGGGTAATTATAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: SKEASTSDEELKVKMGALDALLS*GNYRPL
Trigger: AAGAGGTCTATAATTACCTCAAGAGAGCAAGGCATC...CAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GCAGGTTCTCTAAAGTTGGTTCATCAGATTCATGGAGTACATCAACACTCAGCTGATGCCTTGCTCTCTTaGGGTAATTATAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: AGSLKLVHQIHGVHQHSADALLS*GNYRPL
Trigger: AAGAGGTCTATAATTACCTCAAGAGAGCAAGGCATC...AGCTGAGTGTTGATGTACTCCATGAATCTGATGAACCAACTTTAGAGAACCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510474.5
CDS-3UTR TCA 90 bp GAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGTTCTTTTCCCATCGTaGTCAGCAACTGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: EELKVKMGALLLYPFPIIVLFPS*SATALQ
Trigger: TTGAAGAGCAGTTGCTGATCACGATGGGAAAAGAAC...TATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCAGTTCTTTTCCCATCGTaGTCAGCAACTGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: STSDEELKVKMGALLLYPVLFPS*SATALQ
Trigger: TTGAAGAGCAGTTGCTGATCACGATGGGAAAAGAAC...TGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATATGTCTTCTGATGAGGAATTaGAAGTCAAGATGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: DGSSAFVSIPHNRVQLICLLMRN*KSRWEL
Trigger: GAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAG...ACATATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp TCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGACTCACACACTTAGCTaGCTCTTGGAATTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SKEASTSDEELKVKMGALTHTLS*LLEFQH
Trigger: ATGCTGAAATTCCAAGAGGCAGCTAAGTGTGTGAGT...CAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CCACTTGAACTTCTGCTTCTTTTTGATAGTTGCCTAGAGATGGTTCTGGAGAGTTTGCTCCACAAAACTTaGATGGAACTTGACAATGGC +
Preference number: 4 (lower is better)
Translates to: PLELLLLFDSCLEMVLESLLHKT*MELDNG
Trigger: GCCATTGTCAAGTTCCATGCAAGTTTTGTGGAGCAA...ACTCTCCAGAACCATCTCTAGGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CCACTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAATTGGAGCCAGCGAATaGATGATTCATGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: PLGHLKRRGDIVSHRQPRIGASE*MIHAAH
Trigger: ATGTGCTGCATGAATCATGCATTCGCTGGCTCCAAT...TCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR GCA 90 bp GAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAATCGTGATCAGCAACTaGTCTTCAAAGTACAGGAGC +
Preference number: 4 (lower is better)
Translates to: EELKVKMGALLLYPFPIIIVISN*SSKYRS
Trigger: GCTCCTGTACTTTGAAGAGCAGTTGCTGATCACGAT...TATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CTACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAATCGTGATCAGCAACTaGTCTTCAAAGTACAGGAGC +
Preference number: 4 (lower is better)
Translates to: LLSKEASTSDEELKVKMGIVISN*SSKYRS
Trigger: GCTCCTGTACTTTGAAGAGCAGTTGCTGATCACGAT...TCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp ATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCAAGCATAGGCAGCCATaGTTACTACTCTCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: ISGYSPNNTYDSKHRQPCKHRQP*LLLSKE
Trigger: TTCTTTAGAGAGTAGTAAGCATGGCTGCCTATGCTT...GCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGACACTTAGCTGCCTCTTaGAATTTCAGCATTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLSKEASTSDEELKVKMGHLAAS*NFSIAP
Trigger: TGGAGCAATGCTGAAATTCCAAGAGGCAGCTAAGTG...TCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGTTGGATAAGTGGAAATaGCTGTTGATCCACTCACAC +
Preference number: 4 (lower is better)
Translates to: SSLLVMEGQKWTKNRSAKLDKWK*LLIHSH
Trigger: GTGTGAGTGGATCAACAGCCATTTCCACTTATCCAA...CTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAAGGTCTTTGGATAAGTaGAAATGGCTGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: SLLVMEGQKWTKNRSAKTRSLDK*KWLLIH
Trigger: GTGGATCAACAGCCATTTCCACTTATCCAAAGACCT...TGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGGTTGGGCTTCCAAATTaGCCTGTACAGTTTCATTTG +
Preference number: 4 (lower is better)
Translates to: SKEASTSDEELKVKMGALVGLPN*PVQFHL
Trigger: CAAATGAAACTGTACAGGCCAATTTGGAAGCCCAAC...CAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp GTGTGTATGAAATACACACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGAGCTTGGAGAGGAGTTaGGCTTCCAAATTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: VCMKYTHIFLISHGRAKVSLERS*ASKLAC
Trigger: ACAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCT...CACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTGTGTATTTCATACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGAGCTTGGAGAGGAGTTaGGCTTCCAAATTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: YKLISGYSPNNTYDSKHRSLERS*ASKLAC
Trigger: ACAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCT...CCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCACTCCCAGCAGCAGCTaGATAAACCATTCTATTATT +
Preference number: 4 (lower is better)
Translates to: SDEELKVKMGALLLYPFPTPSSS*INHSII
Trigger: AATAATAGAATGGTTTATCCAGCTGCTGCTGGGAGT...GGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCTCTTCATCCTCGTCCTaGGGTGAACAAGAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: TSDEELKVKMGALLLYPFSSSSS*GEQESL
Trigger: AAGACTTTCTTGTTCACCCCAGGACGAGGATGAAGA...GAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCATTGATTCAAGTTCGTaGAGGTCCATGGAAGGAATA +
Preference number: 4 (lower is better)
Translates to: ISGYSPNNTYDSKHRQPCIDSSS*RSMEGI
Trigger: TATTCCTTCCATGGACCTCCACGAACTTGAATCAAT...GCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTTCACAATAGGAATCAAATGCATCAGCGTAGTACTCTTCAGCCACAAGTGGGTATCCAAGGTCAGATGTaGCATCCTCTACAATTGATT +
Preference number: 4 (lower is better)
Translates to: LHNRNQMHQRSTLQPQVGIQGQM*HPLQLI
Trigger: AATCAATTGTAGAGGATGCCACATCTGACCTTGGAT...ACCCACTTGTGGCTGAAGAGTACTACGCTGATGCATTTGATTCCTATTGTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATTCTTCTGGGATCTCATaGTATCCAAGGTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: LSQGIVQITLMTPSIGSHSSGIS*YPRSDV
Trigger: CACATCTGACCTTGGATACCATGAGATCCCAGAAGA...ATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ACACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCTCTTCTGGGATCTCATaGTATCCAAGGTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: THIFLISHGRAKVDQKQVSSGIS*YPRSDV
Trigger: CACATCTGACCTTGGATACCATGAGATCCCAGAAGA...GACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp GGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATATGTTAAACTCTTCAGCCACAAGTaGGTCTTCTGGGATCTCATG +
Preference number: 4 (lower is better)
Translates to: GALLLYPFPIIEFSLYVKLFSHK*VFWDLM
Trigger: CATGAGATCCCAGAAGACCCACTTGTGGCTGAAGAG...TTTAACATATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp GAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATACATTTTCCAAACACCTaGCCAACGCTTCGATATCAC +
Preference number: 4 (lower is better)
Translates to: EELKVKMGALLLYPFPIIHFPNT*PTLRYH
Trigger: GTGATATCGAAGCGTTGGCCAGGTGTTTGGAAAATG...TATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATTTGTCCACTTGAACTTCTGCTTCTTTTTGATAGTTGCCTAGAGATGGTTCTGTCATGCGTTTCATCTTaGTCCTGGCCATCACACTGT +
Preference number: 4 (lower is better)
Translates to: ICPLELLLLFDSCLEMVLSCVSS*SWPSHC
Trigger: ACAGTGTGATGGCCAGGACCAAGATGAAACGCATGA...CAGAACCATCTCTAGGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGGACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATATCCCCAGCTTCTGCATaGCTGATTCCCTCATGCGTT +
Preference number: 4 (lower is better)
Translates to: SISLSQGIVQITLMTPSISPASA*LIPSCV
Trigger: AACGCATGAGGGAATCAGCCATGCAGAAGCTGGGGA...TATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp GGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGACTTCAAAACAGTCGCTaGCTTGAGGCACCACTTTTT +
Preference number: 4 (lower is better)
Translates to: GIESQDGSSAFVSIPHNRLQNSR*LEAPLF
Trigger: AAAAAGTGGTGCCTCAAGCCAGCGACTGTTTTGAAG...TCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
3UTR CAA 72 bp CTACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATaGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCA +
Preference number: 4 (lower is better)
Translates to: LLSKEASTSDEE*KVKMGALLLYP
Trigger: TGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGAGTGGAAATGGCTGTTaGTCCACTCACACACTTAGC +
Preference number: 4 (lower is better)
Translates to: HLKRRGDIVSHRQPRTVKSGNGC*STHTLS
Trigger: GCTAAGTGTGTGAGTGGATCAACAGCCATTTCCACT...CTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp GAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATACTGCCAAGTTTTTGTTaGAGCACGTATCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: EELKVKMGALLLYPFPIILPSFC*STYLLA
Trigger: TGCAAGAAGATACGTGCTTCAACAAAAACTTGGCAG...TATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CTACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGATTTGGCTTTCTTGTCTaGAACCAGATAGACAGTTCC +
Preference number: 4 (lower is better)
Translates to: LLSKEASTSDEELKVKMGFGFLV*NQIDSS
Trigger: GGAACTGTCTATCTGGTTTCAGACAAGAAAGCCAAA...TCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTGACTTTAAGTCTCGATaGAGTATCCTCCTCTCATGC +
Preference number: 4 (lower is better)
Translates to: REPNLIYKLISGYSPNNTDFKSR*SILLSC
Trigger: GCATGAGAGGAGGATACTTCATCGAGACTTAAAGTC...AGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTTCAACACTCAGCTGCTaGAAGTTCCGAGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: LGHLKRRGDIVSHRQPRTSTLSC*KFRDLN
Trigger: ATTGAGATCTCGGAACTTTCAGCAGCTGAGTGTTGA...AGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp ATTTGTCCACTTGAACTTCTGCTTCTTTTTGATAGTTGCCTAGAGATGGTTCTGTCAACACTCAGCTGCTaGAAGTTCCGAGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: ICPLELLLLFDSCLEMVLSTLSC*KFRDLN
Trigger: ATTGAGATCTCGGAACTTTCAGCAGCTGAGTGTTGA...CAGAACCATCTCTAGGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGGACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGATGCCTTGCTCTCTTaGGGTAATTATAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: LSQGIVQITLMTPSIGSHDALLS*GNYRPL
Trigger: AAGAGGTCTATAATTACCTCAAGAGAGCAAGGCATC...ATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp ACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCAAGGGAGCCAAACTTaGTCTATAAGCTTATCTCAG +
Preference number: 4 (lower is better)
Translates to: TSDEELKVKMGALLLYPFQGSQT*SISLSQ
Trigger: CTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTG...GAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp ACACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCACTCACACACTTAGCTaGCTCTTGGAATTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: THIFLISHGRAKVDQKQVTHTLS*LLEFQH
Trigger: ATGCTGAAATTCCAAGAGGCAGCTAAGTGTGTGAGT...GACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp GAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATATTGCTCCACAAAACTTaGATGGAACTTGACAATGGC +
Preference number: 4 (lower is better)
Translates to: EELKVKMGALLLYPFPIILLHKT*MELDNG
Trigger: GCCATTGTCAAGTTCCATGCAAGTTTTGTGGAGCAA...TATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp TCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACATCTCATACAAAATaGATGCCAGTGACCAGATGT +
Preference number: 4 (lower is better)
Translates to: SSLLVMEGQKWTKNRSAKTSHTK*MPVTRC
Trigger: ACATCTGGTCACTGGCATGCATTTTGTATGAGATGT...CTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTATTGGAGCCAGCGAATaGATGATTCATGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: REPNLIYKLISGYSPNNTIGASE*MIHAAH
Trigger: ATGTGCTGCATGAATCATGCATTCGCTGGCTCCAAT...AGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTAAGTCAGCTGTGAGTTaGATGGTATCCAAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LGHLKRRGDIVSHRQPRTKSAVS*MVSKVR
Trigger: TCTGACCTTGGATACCATGCAACTCACAGCTGACTT...AGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR GCA 90 bp TCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACACTTCTTTTTGATAGTTaGCTAGAGATGGTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SLLVMEGQKWTKNRSAKTLLFDS*LEMVLE
Trigger: CTCCAGAACCATCTCTAGGCAACTATCAAAAAGAAG...TGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CCACTTGAACTTCTGCTTCTTTTTGATAGTTGCCTAGAGATGGTTCTGGAGAGTCTTCTTTTTGATAGTTaGCTAGAGATGGTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: PLELLLLFDSCLEMVLESLLFDS*LEMVLE
Trigger: CTCCAGAACCATCTCTAGGCAACTATCAAAAAGAAG...ACTCTCCAGAACCATCTCTAGGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp ACTCTCTTCACAATAGGAATCAAATGCATCAGCGTAGTACTCTTCAGCCACAAGCTTCTTTTTGATAGTTaGCTAGAGATGGTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: TLFTIGIKCISVVLFSHKLLFDS*LEMVLE
Trigger: CTCCAGAACCATCTCTAGGCAACTATCAAAAAGAAG...CTTGTGGCTGAAGAGTACTACGCTGATGCATTTGATTCCTATTGTGAAGAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR GCA 90 bp TTCATGGAGTACATCAACACTCAGCTGCTGAAAGTTCCGAGATCTCAATTCTTGGTCCACTTGAACTTCTaGTTCTTTTTGATAGTTGCC +
Preference number: 4 (lower is better)
Translates to: FMEYINTQLLKVPRSQFLVHLNF*FFLIVA
Trigger: GGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGGAC...CAAGAATTGAGATCTCGGAACTTTCAGCAGCTGAGTGTTGATGTACTCCATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTAAGCATAGGCAGCCATaGTTACTACTCTCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: SQDGSSAFVSIPHNRVQLKHRQP*LLLSKE
Trigger: TTCTTTAGAGAGTAGTAAGCATGGCTGCCTATGCTT...AAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGTTGGGCTTCCAAATTaGCCTGTACAGTTTCATTTG +
Preference number: 4 (lower is better)
Translates to: LLSKEASTSDEELKVKMGVGLPN*PVQFHL
Trigger: CAAATGAAACTGTACAGGCCAATTTGGAAGCCCAAC...TCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TACACACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGTCCACAAAACTTGCATaGAACTTGACAATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: YTHIFLISHGRAKVDQKQSTKLA*NLTMAG
Trigger: CCCAGCCATTGTCAAGTTCCATGCAAGTTTTGTGGA...CTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTGTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTCCGCATCCTTTCTCTTaGCGTCATTTTCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: REPNLIYKLISGYSPNNTPHPFS*RHFLYF
Trigger: GAAGTACAGAAAATGACGCCAAGAGAAAGGATGCGG...AGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATTAATTATATGAGCAGCCTCCTTCTGACAATCCAAATTTTTGTCTTCCAGAGTCTCTTCAGCCACAAGTaGGTCTTCTGGGATCTCATG +
Preference number: 4 (lower is better)
Translates to: INYMSSLLLTIQIFVFQSLFSHK*VFWDLM
Trigger: CATGAGATCCCAGAAGACCCACTTGTGGCTGAAGAG...ACTCTGGAAGACAAAAATTTGGATTGTCAGAAGGAGGCTGCTCATATAATTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp GGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATATGTTAAAGAAAATTGGTGGTCCTaGGGACATGTCTTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: GALLLYPFPIIEFSLYVKENWWS*GHVFSH
Trigger: ATGGCTGAAGACATGTCCCCAGGACCACCAATTTTC...TTTAACATATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp CTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTTTTGGCTTTCTTGTCTaGAACCAGATAGACAGTTCC +
Preference number: 4 (lower is better)
Translates to: LGHLKRRGDIVSHRQPRTFGFLV*NQIDSS
Trigger: GGAACTGTCTATCTGGTTTCAGACAAGAAAGCCAAA...AGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp TTTCCACTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCTTTGGCTTTCTTGTCTaGAACCAGATAGACAGTTCC +
Preference number: 4 (lower is better)
Translates to: FPLGHLKRRGDIVSHRQPFGFLV*NQIDSS
Trigger: GGAACTGTCTATCTGGTTTCAGACAAGAAAGCCAAA...GGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAGTGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR TCA 90 bp TATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGGACTTTAAGTCTCGATaGAGTATCCTCCTCTCATGC +
Preference number: 4 (lower is better)
Translates to: YKLISGYSPNNTYDSKHRDFKSR*SILLSC
Trigger: GCATGAGAGGAGGATACTTCATCGAGACTTAAAGTC...CCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TTTTGTCTTCCAGAGTCATTTCTGAATATCTACACATTAGGTTCTGTAGCTGCTGACTTTAAGTCTCGATaGAGTATCCTCCTCTCATGC +
Preference number: 4 (lower is better)
Translates to: FCLPESFLNIYTLGSVAADFKSR*SILLSC
Trigger: GCATGAGAGGAGGATACTTCATCGAGACTTAAAGTC...AGCAGCTACAGAACCTAATGTGTAGATATTCAGAAATGACTCTGGAAGACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AAATGCTTTTCAAGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTCTTCTGATGAGGAATTaGAAGTCAAGATGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: KCFSREPNLIYKLISGYSLLMRN*KSRWEL
Trigger: GAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAG...ACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTGAAAAGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTCAAGGGAGCCAAACTTaGTCTATAAGCTTATCTCAG +
Preference number: 4 (lower is better)
Translates to: REPNLIYKLISGYSPNNTQGSQT*SISLSQ
Trigger: CTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTG...AGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp TTTCCACTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCACTCACACACTTAGCTaGCTCTTGGAATTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: FPLGHLKRRGDIVSHRQPTHTLS*LLEFQH
Trigger: ATGCTGAAATTCCAAGAGGCAGCTAAGTGTGTGAGT...GGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAGTGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR GCA 90 bp TCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGAAGCACGTATCTTCTTaGAATCAAGGTCTTTGGATA +
Preference number: 4 (lower is better)
Translates to: SKEASTSDEELKVKMGALKHVSS*NQGLWI
Trigger: TATCCAAAGACCTTGATTGCAAGAAGATACGTGCTT...CAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTAAGCACGTATCTTCTTaGAATCAAGGTCTTTGGATA +
Preference number: 4 (lower is better)
Translates to: LSKEASTSDEELKVKMGAKHVSS*NQGLWI
Trigger: TATCCAAAGACCTTGATTGCAAGAAGATACGTGCTT...AGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp TTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATACATCTCATACAAAATaGATGCCAGTGACCAGATGT +
Preference number: 4 (lower is better)
Translates to: LSQGIVQITLMTPSIGSHTSHTK*MPVTRC
Trigger: ACATCTGGTCACTGGCATGCATTTTGTATGAGATGT...ATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CCACTTGAACTTCTGCTTCTTTTTGATAGTTGCCTAGAGATGGTTCTGGAGAGTCGAATGCATGATTCATaGAGCACATCTCATACAAAA +
Preference number: 4 (lower is better)
Translates to: PLELLLLFDSCLEMVLESRMHDS*STSHTK
Trigger: TTTTGTATGAGATGTGCTGCATGAATCATGCATTCG...ACTCTCCAGAACCATCTCTAGGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCGAATGCATGATTCATaGAGCACATCTCATACAAAA +
Preference number: 4 (lower is better)
Translates to: LSKEASTSDEELKVKMGARMHDS*STSHTK
Trigger: TTTTGTATGAGATGTGCTGCATGAATCATGCATTCG...AGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp GTGTGTATGAAATACACACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGATTGGAGCCAGCGAATaGATGATTCATGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: VCMKYTHIFLISHGRAKVIGASE*MIHAAH
Trigger: ATGTGCTGCATGAATCATGCATTCGCTGGCTCCAAT...CACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTGTGTATTTCATACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTACAATAGGAATCAAATaGATCAGCGTAGTACTCTTC +
Preference number: 4 (lower is better)
Translates to: LSKEASTSDEELKVKMGATIGIK*ISVVLF
Trigger: GAAGAGTACTACGCTGATGCATTTGATTCCTATTGT...AGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp TATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGATCGTGATCAGCAACTaGTCTTCAAAGTACAGGAGC +
Preference number: 4 (lower is better)
Translates to: YKLISGYSPNNTYDSKHRIVISN*SSKYRS
Trigger: GCTCCTGTACTTTGAAGAGCAGTTGCTGATCACGAT...CCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp GATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATATGTCTTCTTTTTGATAGTTaGCTAGAGATGGTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: DGSSAFVSIPHNRVQLICLLFDS*LEMVLE
Trigger: CTCCAGAACCATCTCTAGGCAACTATCAAAAAGAAG...ACATATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp GGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTCCACTTGAACTTCTaGTTCTTTTTGATAGTTGCC +
Preference number: 4 (lower is better)
Translates to: GIESQDGSSAFVSIPHNRVHLNF*FFLIVA
Trigger: GGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGGAC...TCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCACTTAGCTGCCTCTTaGAATTTCAGCATTGCTCCA +
Preference number: 4 (lower is better)
Translates to: YKLISGYSPNNTYDSKHRHLAAS*NFSIAP
Trigger: TGGAGCAATGCTGAAATTCCAAGAGGCAGCTAAGTG...CCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTAGGTCTTTGGATAAGTaGAAATGGCTGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: REPNLIYKLISGYSPNNTRSLDK*KWLLIH
Trigger: GTGGATCAACAGCCATTTCCACTTATCCAAAGACCT...AGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp GGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATATGTTAAATCCACAAAACTTGCATaGAACTTGACAATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GALLLYPFPIIEFSLYVKSTKLA*NLTMAG
Trigger: CCCAGCCATTGTCAAGTTCCATGCAAGTTTTGTGGA...TTTAACATATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp AAATGCTTTTCAAGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTTCCACAAAACTTGCATaGAACTTGACAATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KCFSREPNLIYKLISGYSSTKLA*NLTMAG
Trigger: CCCAGCCATTGTCAAGTTCCATGCAAGTTTTGTGGA...ACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTGAAAAGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCACTCCCAGCAGCAGCTaGATAAACCATTCTATTATT +
Preference number: 4 (lower is better)
Translates to: TSDEELKVKMGALLLYPFTPSSS*INHSII
Trigger: AATAATAGAATGGTTTATCCAGCTGCTGCTGGGAGT...GAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCCGCATCCTTTCTCTTaGCGTCATTTTCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: YKLISGYSPNNTYDSKHRPHPFS*RHFLYF
Trigger: GAAGTACAGAAAATGACGCCAAGAGAAAGGATGCGG...CCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAATTGATTCAAGTTCGTaGAGGTCCATGGAAGGAATA +
Preference number: 4 (lower is better)
Translates to: LLSKEASTSDEELKVKMGIDSSS*RSMEGI
Trigger: TATTCCTTCCATGGACCTCCACGAACTTGAATCAAT...TCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CCACTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAATTGATTCAAGTTCGTaGAGGTCCATGGAAGGAATA +
Preference number: 4 (lower is better)
Translates to: PLGHLKRRGDIVSHRQPRIDSSS*RSMEGI
Trigger: TATTCCTTCCATGGACCTCCACGAACTTGAATCAAT...TCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp AGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCAATCCAAGGTCAGATGTaGCATCCTCTACAATTGATT +
Preference number: 4 (lower is better)
Translates to: STSDEELKVKMGALLLYPIQGQM*HPLQLI
Trigger: AATCAATTGTAGAGGATGCCACATCTGACCTTGGAT...TGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAAAATTCATCCAGTGTTaGTCAGTTCAGACTTTCCAG +
Preference number: 4 (lower is better)
Translates to: HISSLLVMEGQKWTKNRSKFIQC*SVQTFQ
Trigger: CTGGAAAGTCTGAACTGACCAACACTGGATGAATTT...TGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383366.9
CDS-3UTR CCA 90 bp AAATGCTTTTCAAGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTTCTTCTGGGATCTCATaGTATCCAAGGTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: KCFSREPNLIYKLISGYSSSGIS*YPRSDV
Trigger: CACATCTGACCTTGGATACCATGAGATCCCAGAAGA...ACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTGAAAAGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATACACAAGTGGGTCTTCTaGGATCTCATGGTATCCAAG +
Preference number: 4 (lower is better)
Translates to: SISLSQGIVQITLMTPSIHKWVF*DLMVSK
Trigger: CTTGGATACCATGAGATCCCAGAAGACCCACTTGTG...TATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATCACAAGTGGGTCTTCTaGGATCTCATGGTATCCAAG +
Preference number: 4 (lower is better)
Translates to: IYKLISGYSPNNTYDSKHHKWVF*DLMVSK
Trigger: CTTGGATACCATGAGATCCCAGAAGACCCACTTGTG...ATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATCACACTGTTGAAAATTaGTGGTCCTGGGGACATGTC +
Preference number: 4 (lower is better)
Translates to: IYKLISGYSPNNTYDSKHHTVEN*WSWGHV
Trigger: GACATGTCCCCAGGACCACCAATTTTCAACAGTGTG...ATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATTAATTATATGAGCAGCCTCCTTCTGACAATCCAAATTTTTGTCTTCCAGAGTTCATGCGTTTCATCTTaGTCCTGGCCATCACACTGT +
Preference number: 4 (lower is better)
Translates to: INYMSSLLLTIQIFVFQSSCVSS*SWPSHC
Trigger: ACAGTGTGATGGCCAGGACCAAGATGAAACGCATGA...ACTCTGGAAGACAAAAATTTGGATTGTCAGAAGGAGGCTGCTCATATAATTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGTCAAAGTACAGGAGCTaGTCCACTTCAAAACAGTCG +
Preference number: 4 (lower is better)
Translates to: YKLISGYSPNNTYDSKHRSKYRS*STSKQS
Trigger: CGACTGTTTTGAAGTGGACCAGCTCCTGTACTTTGA...CCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp AAATGCTTTTCAAGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTTTTGGCTTTCTTGTCTaGAACCAGATAGACAGTTCC +
Preference number: 4 (lower is better)
Translates to: KCFSREPNLIYKLISGYSFGFLV*NQIDSS
Trigger: GGAACTGTCTATCTGGTTTCAGACAAGAAAGCCAAA...ACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTGAAAAGCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp GGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATATGTTAAAGATGCCTTGCTCTCTTaGGGTAATTATAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: GALLLYPFPIIEFSLYVKDALLS*GNYRPL
Trigger: AAGAGGTCTATAATTACCTCAAGAGAGCAAGGCATC...TTTAACATATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR TCA 90 bp TTTTGTCTTCCAGAGTCATTTCTGAATATCTACACATTAGGTTCTGTAGCTGCTGATGCCTTGCTCTCTTaGGGTAATTATAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: FCLPESFLNIYTLGSVAADALLS*GNYRPL
Trigger: AAGAGGTCTATAATTACCTCAAGAGAGCAAGGCATC...AGCAGCTACAGAACCTAATGTGTAGATATTCAGAAATGACTCTGGAAGACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CCACTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGATTGGAATTTCAGCATTaGTCCAAACAAGAGAGAACT +
Preference number: 4 (lower is better)
Translates to: PLGHLKRRGDIVSHRQPRLEFQH*SKQERT
Trigger: AGTTCTCTCTTGTTTGGAGCAATGCTGAAATTCCAA...TCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR GCA 90 bp CAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATATTGGAATTTCAGCATTaGTCCAAACAAGAGAGAACT +
Preference number: 4 (lower is better)
Translates to: QDGSSAFVSIPHNRVQLILEFQH*SKQERT
Trigger: AGTTCTCTCTTGTTTGGAGCAATGCTGAAATTCCAA...TATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTGGAATTTCAGCATTaGTCCAAACAAGAGAGAACT +
Preference number: 4 (lower is better)
Translates to: STSDEELKVKMGALLLYPLEFQH*SKQERT
Trigger: AGTTCTCTCTTGTTTGGAGCAATGCTGAAATTCCAA...TGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp GAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATATTGGAATTTCAGCATTaGTCCAAACAAGAGAGAACT +
Preference number: 4 (lower is better)
Translates to: EELKVKMGALLLYPFPIILEFQH*SKQERT
Trigger: AGTTCTCTCTTGTTTGGAGCAATGCTGAAATTCCAA...TATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATAAAGCACGTATCTTCTTaGAATCAAGGTCTTTGGATA +
Preference number: 4 (lower is better)
Translates to: QDGSSAFVSIPHNRVQLIKHVSS*NQGLWI
Trigger: TATCCAAAGACCTTGATTGCAAGAAGATACGTGCTT...TATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp ACTCTCTTCACAATAGGAATCAAATGCATCAGCGTAGTACTCTTCAGCCACAAGCGAGATCTCAATTCTTaGATTCGTTTGCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: TLFTIGIKCISVVLFSHKRDLNS*IRLLFS
Trigger: AGAAAATAGCAAACGAATGCAAGAATTGAGATCTCG...CTTGTGGCTGAAGAGTACTACGCTGATGCATTTGATTCCTATTGTGAAGAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AAATGCTTTTCAAGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTTTGTGTCTAGAGAAGTaGAACCCAGGACATTTTCCA +
Preference number: 4 (lower is better)
Translates to: KCFSREPNLIYKLISGYSLCLEK*NPGHFP
Trigger: TGGAAAATGTCCTGGGTTGCACTTCTCTAGACACAA...ACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTGAAAAGCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATAAGCATTCTGATGCCTTaGTCTCTTGAGGTAATTATA +
Preference number: 4 (lower is better)
Translates to: QDGSSAFVSIPHNRVQLISILMP*SLEVII
Trigger: TATAATTACCTCAAGAGAGCAAGGCATCAGAATGCT...TATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTAAGCATAGGCAGCCATaGTTACTACTCTCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: REPNLIYKLISGYSPNNTKHRQP*LLLSKE
Trigger: TTCTTTAGAGAGTAGTAAGCATGGCTGCCTATGCTT...AGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp GGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATATGTTAAATTGGATAAGTGGAAATaGCTGTTGATCCACTCACAC +
Preference number: 4 (lower is better)
Translates to: GALLLYPFPIIEFSLYVKLDKWK*LLIHSH
Trigger: GTGTGAGTGGATCAACAGCCATTTCCACTTATCCAA...TTTAACATATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TACACACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGTGCAATCAAGGTCTTTaGATAAGTGGAAATGGCTGT +
Preference number: 4 (lower is better)
Translates to: YTHIFLISHGRAKVDQKQCNQGL*ISGNGC
Trigger: ACAGCCATTTCCACTTATCCAAAGACCTTGATTGCA...CTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTGTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CCA 90 bp CTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTACTCCCAGCAGCAGCTaGATAAACCATTCTATTATT +
Preference number: 4 (lower is better)
Translates to: LGHLKRRGDIVSHRQPRTTPSSS*INHSII
Trigger: AATAATAGAATGGTTTATCCAGCTGCTGCTGGGAGT...AGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp TTTCCACTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCACTCCCAGCAGCAGCTaGATAAACCATTCTATTATT +
Preference number: 4 (lower is better)
Translates to: FPLGHLKRRGDIVSHRQPTPSSS*INHSII
Trigger: AATAATAGAATGGTTTATCCAGCTGCTGCTGGGAGT...GGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAGTGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp TTTCCACTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCATCCAAGGTCAGATGTaGCATCCTCTACAATTGATT +
Preference number: 4 (lower is better)
Translates to: FPLGHLKRRGDIVSHRQPIQGQM*HPLQLI
Trigger: AATCAATTGTAGAGGATGCCACATCTGACCTTGGAT...GGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAGTGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CCA 90 bp CTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTATCCAAGGTCAGATGTaGCATCCTCTACAATTGATT +
Preference number: 4 (lower is better)
Translates to: LGHLKRRGDIVSHRQPRTIQGQM*HPLQLI
Trigger: AATCAATTGTAGAGGATGCCACATCTGACCTTGGAT...AGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
3UTR CAA 72 bp GATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTaGTATCCATTCCCCATAATAGAGTTCAGCTTATAT +
Preference number: 4 (lower is better)
Translates to: DEELKVKMGALL*YPFPIIEFSLY
Trigger: ATATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp TTTCCACTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAAGCACGTATCTTCTTaGAATCAAGGTCTTTGGATA +
Preference number: 4 (lower is better)
Translates to: FPLGHLKRRGDIVSHRQPKHVSS*NQGLWI
Trigger: TATCCAAAGACCTTGATTGCAAGAAGATACGTGCTT...GGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAGTGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR GCA 90 bp ATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATTTGCTCCACAAAACTTaGATGGAACTTGACAATGGC +
Preference number: 4 (lower is better)
Translates to: IYKLISGYSPNNTYDSKHLLHKT*MELDNG
Trigger: GCCATTGTCAAGTTCCATGCAAGTTTTGTGGAGCAA...ATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CTACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGACGAGATCTCAATTCTTaGATTCGTTTGCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: LLSKEASTSDEELKVKMGRDLNS*IRLLFS
Trigger: AGAAAATAGCAAACGAATGCAAGAATTGAGATCTCG...TCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp ACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCGAGATCTCAATTCTTaGATTCGTTTGCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: TSDEELKVKMGALLLYPFRDLNS*IRLLFS
Trigger: AGAAAATAGCAAACGAATGCAAGAATTGAGATCTCG...GAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp GAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATACGAGATCTCAATTCTTaGATTCGTTTGCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: EELKVKMGALLLYPFPIIRDLNS*IRLLFS
Trigger: AGAAAATAGCAAACGAATGCAAGAATTGAGATCTCG...TATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp AGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTACAATAGGAATCAAATaGATCAGCGTAGTACTCTTC +
Preference number: 4 (lower is better)
Translates to: REPNLIYKLISGYSPNNTTIGIK*ISVVLF
Trigger: GAAGAGTACTACGCTGATGCATTTGATTCCTATTGT...AGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATTTGGATAAGTGGAAATaGCTGTTGATCCACTCACAC +
Preference number: 4 (lower is better)
Translates to: IYKLISGYSPNNTYDSKHLDKWK*LLIHSH
Trigger: GTGTGAGTGGATCAACAGCCATTTCCACTTATCCAA...ATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATATTGGATAAGTGGAAATaGCTGTTGATCCACTCACAC +
Preference number: 4 (lower is better)
Translates to: SISLSQGIVQITLMTPSILDKWK*LLIHSH
Trigger: GTGTGAGTGGATCAACAGCCATTTCCACTTATCCAA...TATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp GGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATATGTTAAAACTCCCAGCAGCAGCTaGATAAACCATTCTATTATT +
Preference number: 4 (lower is better)
Translates to: GALLLYPFPIIEFSLYVKTPSSS*INHSII
Trigger: AATAATAGAATGGTTTATCCAGCTGCTGCTGGGAGT...TTTAACATATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp TATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGATCCAAGGTCAGATGTaGCATCCTCTACAATTGATT +
Preference number: 4 (lower is better)
Translates to: YKLISGYSPNNTYDSKHRIQGQM*HPLQLI
Trigger: AATCAATTGTAGAGGATGCCACATCTGACCTTGGAT...CCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp CATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGAAGCACGTATCTTCTTaGAATCAAGGTCTTTGGATA +
Preference number: 4 (lower is better)
Translates to: HLKRRGDIVSHRQPRTVKKHVSS*NQGLWI
Trigger: TATCCAAAGACCTTGATTGCAAGAAGATACGTGCTT...CTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR GCA 90 bp ATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATGTCCACTTGAACTTCTaGTTCTTTTTGATAGTTGCC +
Preference number: 4 (lower is better)
Translates to: IYKLISGYSPNNTYDSKHVHLNF*FFLIVA
Trigger: GGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGGAC...ATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CCA 90 bp ATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATTGCAATCAAGGTCTTTaGATAAGTGGAAATGGCTGT +
Preference number: 4 (lower is better)
Translates to: IYKLISGYSPNNTYDSKHCNQGL*ISGNGC
Trigger: ACAGCCATTTCCACTTATCCAAAGACCTTGATTGCA...ATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR GCA 90 bp ATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGCATTCTGATGCCTTaGTCTCTTGAGGTAATTATA +
Preference number: 4 (lower is better)
Translates to: IYKLISGYSPNNTYDSKHSILMP*SLEVII
Trigger: TATAATTACCTCAAGAGAGCAAGGCATCAGAATGCT...ATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
3UTR CAA 72 bp AAAATTTCGATAGCAGATGGTCTTAATGAAGGATTCTaGTTCAACATGCTTTCCATGATGGCATTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: KISIADGLNEGF*FNMLSMMAFSS
Trigger: AGAACTAAATGCCATCATGGAAAGCATGTTGAACAAGAATCCTTCATTAAGACCATCTGCTATCGAAATTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS GCA 90 bp GTTCGCTTTACCTTTCCCTGTCGTGGTCGGAGCGGCGCCCGGGGCTaGCCAAGTCTTGCGGGTAATCGGGCAGGCCTCAAACTAGGGGCA +
Preference number: 5 (lower is better)
Translates to: VRFTFPCRGRSGARG*PSLAGNRAGLKLGA
Trigger: TGCCCCTAGTTTGAGGCCTGCCCGATTACCCGCAAGACTTGGGCAGCCCCGGGCGCCGCTCCGACCACGACAGGGAAAGGTAAAGCGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506695.5
ENST00000513550.1
CDS GCA 90 bp TTGGTCAGTTCCTTTCCCTGTCGTGGTCGGAGCGGCGCCCGGGGCTaGCCAAGTCTTGCGGGTAATCGGGCAGGCCTCAAACTAGGGGCA +
Preference number: 5 (lower is better)
Translates to: LVSSFPCRGRSGARG*PSLAGNRAGLKLGA
Trigger: TGCCCCTAGTTTGAGGCCTGCCCGATTACCCGCAAGACTTGGGCAGCCCCGGGCGCCGCTCCGACCACGACAGGGAAAGGAACTGACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAAGGGGCTGCCCAAGTCTaGCGGGTAATCGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: LLEALRAHMREMLFKGAKGAAQV*RVIGQA
Trigger: GGCCTGCCCGATTACCCGCAAGACTTGGGCAGCCCC...TTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GTAAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCGCTGGGTGGTCCAGCTaGGAGAGGAGTTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: VKGMWGSYRQAKHNHLQVAGWSS*ERSWAS
Trigger: GGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAGC...GACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp CTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAACTTGGGGCTGCCCAAGTCTaGCGGGTAATCGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: LEALRAHMREMLFKGAKLGAAQV*RVIGQA
Trigger: GGCCTGCCCGATTACCCGCAAGACTTGGGCAGCCCC...AAGTTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS CCA 90 bp ACATCCGGAGGTAAGATGTCCAGGAAAGCGAGGAGATCGCAGCCATaGCGTCCTAGAGATTCGGAACCCAGCCCGGGCAGCTTGAAACCA +
Preference number: 5 (lower is better)
Translates to: TSGGKMSRKARRSQP*RPRDSEPSPGSLKP
Trigger: TGGTTTCAAGCTGCCCGGGCTGGGTTCCGAATCTCTAGGACGCCATGGCTGCGATCTCCTCGCTTTCCTGGACATCTTACCTCCGGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506695.5
ENST00000507967.1
ENST00000513550.1
CDS-3UTR CAA 90 bp AGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAATCCTGCTGGAAGCAGCTTGGAGAGGAGTaGGGCTTCCAAATTGGCCTG +
Preference number: 5 (lower is better)
Translates to: RAHGFSPVIVRVTQSCWKQLGEE*GFQIGL
Trigger: CAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCTG...CTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAGCTGGGTGGTCCAGCTaGGAGAGGAGTTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LKIMKSTRLLPGHRQGDSAGWSS*ERSWAS
Trigger: GGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAGC...TGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTGGCTTTCTCATCAGCCGCCTGGAGCTTCCTCAGCCGCATCCTTTCTCTTGGCCTCATGCGTTTCATCTaGGTCCTGGCCATCACACTG +
Preference number: 5 (lower is better)
Translates to: LAFSSAAWSFLSRILSLGLMRFI*VLAITL
Trigger: CAGTGTGATGGCCAGGACCAAGATGAAACGCATGAG...GCCAAGAGAAAGGATGCGGCTGAGGAAGCTCCAGGCGGCTGATGAGAAAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CAA 90 bp AGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAATCCTGCTGGAAGCCGCCGCATCCTTTCTCTaGGCGTCATTTTCTGTACTT +
Preference number: 5 (lower is better)
Translates to: STRLLPGHRQGDSILLEAAASFL*ASFSVL
Trigger: AAGTACAGAAAATGACGCCAAGAGAAAGGATGCGGC...GGCTTCCAGCAGGATTGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GGAGCCAGCGAATGCATGATTCATGCAGCACATCTCATACAAAATGCATGCCAGGCTGGGTGGTCCAGCTaGGAGAGGAGTTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: GASECMIHAAHLIQNACQAGWSS*ERSWAS
Trigger: GGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAGC...CTGGCATGCATTTTGTATGAGATGTGCTGCATGAATCATGCATTCGCTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514915.5
CDS-3UTR CAA 90 bp CCTACTTCACTGCATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTCAGCTTGGAGAGGAGTaGGGCTTCCAAATTGGCCTG +
Preference number: 5 (lower is better)
Translates to: PTSLHSPHLNGGVGSHAPQLGEE*GFQIGL
Trigger: CAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCTG...AGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp ATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCTCCTACAGGCAGCTTGGAGAGGAGTaGGGCTTCCAAATTGGCCTG +
Preference number: 5 (lower is better)
Translates to: IVSHRQPRTVKGMWGSYRQLGEE*GFQIGL
Trigger: CAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCTG...CCTGTAGGAGCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp CCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGAAACTTGCATGGAACTaGACAATGGCTGGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: PPAENNEEHTASPRSSSGKLAWN*TMAGWS
Trigger: GGACCACCCAGCCATTGTCAAGTTCCATGCAAGTTT...CCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGAGCTATCTCCTTTGTGTCATAGCCTaGGTGTTTCAGAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: VGLLQASKAQPPTGLSYLLCVIA*VFQSLR
Trigger: CCTGAGGCTCTGAAACACCAAGGCTATGACACAAAG...GAGATAGCTCAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp TCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGGGGGCTGCCCAAGTCTaGCGGGTAATCGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: SSLLVMEGQKWTKNRSAKGAAQV*RVIGQA
Trigger: GGCCTGCCCGATTACCCGCAAGACTTGGGCAGCCCC...CTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ACTCTCTTCACAATAGGAATCAAATGCATCAGCGTAGTACTCTTCAGCCACAAGGGGGCTGCCCAAGTCTaGCGGGTAATCGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: TLFTIGIKCISVVLFSHKGAAQV*RVIGQA
Trigger: GGCCTGCCCGATTACCCGCAAGACTTGGGCAGCCCC...CTTGTGGCTGAAGAGTACTACGCTGATGCATTTGATTCCTATTGTGAAGAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAACTCATGCGTTTCATCTaGGTCCTGGCCATCACACTG +
Preference number: 5 (lower is better)
Translates to: LLEALRAHMREMLFKGAKLMRFI*VLAITL
Trigger: CAGTGTGATGGCCAGGACCAAGATGAAACGCATGAG...TTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000514915.5
CDS TCA 90 bp GAGCTGCCCAGGAAAATCAGAGGGCCCCGATGGGACCCACCACTCTaGAAACAATGCTTAGTTCCTTCAATCAGCAGCAATCCCAGCAAT +
Preference number: 5 (lower is better)
Translates to: ELPRKIRGPRWDPPL*KQCLVPSISSNPSN
Trigger: ATTGCTGGGATTGCTGCTGATTGAAGGAACTAAGCATTGTTTTCAGAGTGGTGGGTCCCATCGGGGCCCTCTGATTTTCCTGGGCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426022.6
CDS-3UTR CAA 90 bp GTGGGTAAGCAGCCAAGGCCTACTTCACTGCATTCTCCACATCTGAATGGTGGGAAACTTGCATGGAACTaGACAATGGCTGGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: VGKQPRPTSLHSPHLNGGKLAWN*TMAGWS
Trigger: GGACCACCCAGCCATTGTCAAGTTCCATGCAAGTTT...CCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGGCCTTGGCTGCTTACCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp GTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGAGCTATCTCGCCGCATCCTTTCTCTaGGCGTCATTTTCTGTACTT +
Preference number: 5 (lower is better)
Translates to: VGLLQASKAQPPTGLSYLAASFL*ASFSVL
Trigger: AAGTACAGAAAATGACGCCAAGAGAAAGGATGCGGC...GAGATAGCTCAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp GTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGAGCTATCTCAAAGTCAGCTGTGAGTaGCATGGTATCCAAGGTCAG +
Preference number: 5 (lower is better)
Translates to: VGLLQASKAQPPTGLSYLKVSCE*HGIQGQ
Trigger: CTGACCTTGGATACCATGCAACTCACAGCTGACTTT...GAGATAGCTCAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp TTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGGGGCTGCCCAAGTCTaGCGGGTAATCGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: LSQGIVQITLMTPSIGSHGAAQV*RVIGQA
Trigger: GGCCTGCCCGATTACCCGCAAGACTTGGGCAGCCCC...ATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCGCGGGCCACGGCTGTTaGGAACCGTGGCCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: TSDEELKVKMGALLLYPFAGHGC*EPWPGR
Trigger: TCTCCCTGGCCACGGTTCCAAACAGCCGTGGCCCGC...GAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510769.5
CDS-3UTR CAA 90 bp CTGCATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTTGTAGACCCACACTTAGCTGCCTCTaGGAATTTCAGCATTGCTCC +
Preference number: 5 (lower is better)
Translates to: LHSPHLNGGVGSHAPCRPTLSCL*EFQHCS
Trigger: GGAGCAATGCTGAAATTCCAAGAGGCAGCTAAGTGT...GGGTCTACAAGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp CTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTACACTTAGCTGCCTCTaGGAATTTCAGCATTGCTCC +
Preference number: 5 (lower is better)
Translates to: LQLKIMKSTRLLPGHRQGTLSCL*EFQHCS
Trigger: GGAGCAATGCTGAAATTCCAAGAGGCAGCTAAGTGT...ACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GTAAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCAATTCCTCTCCTCGTTaGGCTTTCTTGTCTGAAACC +
Preference number: 5 (lower is better)
Translates to: VKGMWGSYRQAKHNHLQVNSSPR*AFLSET
Trigger: GGTTTCAGACAAGAAAGCCAAACGAGGAGAGGAATT...GACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp CTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTGCTGGGTGGTCCAGCTaGGAGAGGAGTTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LSKEASTSDEELKVKMGAAGWSS*ERSWAS
Trigger: GGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAGC...AGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GTGGGTAAGCAGCCAAGGCCTACTTCACTGCATTCTCCACATCTGAATGGTGGGACCAGATGTCCGACTTaGTGTCATAGCCTTGGTGTT +
Preference number: 5 (lower is better)
Translates to: VGKQPRPTSLHSPHLNGGTRCPT*CHSLGV
Trigger: AACACCAAGGCTATGACACAAAGTCGGACATCTGGT...CCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGGCCTTGGCTGCTTACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp GTCCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGACCAGATGTCCGACTTaGTGTCATAGCCTTGGTGTT +
Preference number: 5 (lower is better)
Translates to: VLQLKIMKSTRLLPGHRQTRCPT*CHSLGV
Trigger: AACACCAAGGCTATGACACAAAGTCGGACATCTGGT...CTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTCTGTCCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGGCCGCATCCTTTCTCTaGGCGTCATTTTCTGTACTT +
Preference number: 5 (lower is better)
Translates to: LCPPAENNEEHTASPRSSAASFL*ASFSVL
Trigger: AAGTACAGAAAATGACGCCAAGAGAAAGGATGCGGC...CGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GTGGGTAAGCAGCCAAGGCCTACTTCACTGCATTCTCCACATCTGAATGGTGGGAAAGTCAGCTGTGAGTaGCATGGTATCCAAGGTCAG +
Preference number: 5 (lower is better)
Translates to: VGKQPRPTSLHSPHLNGGKVSCE*HGIQGQ
Trigger: CTGACCTTGGATACCATGCAACTCACAGCTGACTTT...CCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGGCCTTGGCTGCTTACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp CTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGGGGCTGCCCAAGTCTaGCGGGTAATCGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: LGHLKRRGDIVSHRQPRTGAAQV*RVIGQA
Trigger: GGCCTGCCCGATTACCCGCAAGACTTGGGCAGCCCC...AGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511262.5
CDS-3UTR CAA 90 bp GTAAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCCTTGGAATTTCAGCATaGCTCCAAACAAGAGAGAAC +
Preference number: 5 (lower is better)
Translates to: VKGMWGSYRQAKHNHLQVLGISA*LQTREN
Trigger: GTTCTCTCTTGTTTGGAGCAATGCTGAAATTCCAAG...GACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp GTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGAGCTATCTCTTGCAATCAAGGTCTTaGGATAAGTGGAAATGGCTG +
Preference number: 5 (lower is better)
Translates to: VGLLQASKAQPPTGLSYLLQSRS*DKWKWL
Trigger: CAGCCATTTCCACTTATCCAAAGACCTTGATTGCAA...GAGATAGCTCAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp GTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGAGCTATCTCACTGCCAAGTTTTTGTaGAAGCACGTATCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: VGLLQASKAQPPTGLSYLTAKFL*KHVSSC
Trigger: GCAAGAAGATACGTGCTTCAACAAAAACTTGGCAGT...GAGATAGCTCAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp CCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGACTGCCAAGTTTTTGTaGAAGCACGTATCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: PPAENNEEHTASPRSSSGTAKFL*KHVSSC
Trigger: GCAAGAAGATACGTGCTTCAACAAAAACTTGGCAGT...CCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GTCCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGAATTCCTCTCCTCGTTaGGCTTTCTTGTCTGAAACC +
Preference number: 5 (lower is better)
Translates to: VLQLKIMKSTRLLPGHRQNSSPR*AFLSET
Trigger: GGTTTCAGACAAGAAAGCCAAACGAGGAGAGGAATT...CTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp AGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGCAGGCTGCCTACAGTTGGGCTTCCAAATaGGCCTGTACAGTTTCATTT +
Preference number: 5 (lower is better)
Translates to: SSACCRLESSDLHWQAAYSWASK*ACTVSF
Trigger: AAATGAAACTGTACAGGCCAATTTGGAAGCCCAACT...GTAGGCAGCCTGCCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCGCTGGGTGGTCCAGCTaGGAGAGGAGTTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: TSDEELKVKMGALLLYPFAGWSS*ERSWAS
Trigger: GGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAGC...GAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp AGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCCTTTGTGTCATAGCCTaGGTGTTTCAGAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: RGDIVSHRQPRTVKGMWGLCVIA*VFQSLR
Trigger: CCTGAGGCTCTGAAACACCAAGGCTATGACACAAAG...GCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp ATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCTCCTACAGGACCAGATGTCCGACTTaGTGTCATAGCCTTGGTGTT +
Preference number: 5 (lower is better)
Translates to: IVSHRQPRTVKGMWGSYRTRCPT*CHSLGV
Trigger: AACACCAAGGCTATGACACAAAGTCGGACATCTGGT...CCTGTAGGAGCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp CCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGGCATTTAGTTCTTTaGGATATCTCTCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: PPAENNEEHTASPRSSSGWHLVL*DISQGE
Trigger: CTCTCCCTGAGAGATATCCAAAAGAACTAAATGCCA...CCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTGGCTTTCTCATCAGCCGCCTGGAGCTTCCTCAGCCGCATCCTTTCTCTTGGCCTTAATGAAGGATTCTaGTTCAACATGCTTTCCATG +
Preference number: 5 (lower is better)
Translates to: LAFSSAAWSFLSRILSLGLNEGF*FNMLSM
Trigger: CATGGAAAGCATGTTGAACAAGAATCCTTCATTAAG...GCCAAGAGAAAGGATGCGGCTGAGGAAGCTCCAGGCGGCTGATGAGAAAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CCTACTTCACTGCATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTGCCGCATCCTTTCTCTaGGCGTCATTTTCTGTACTT +
Preference number: 5 (lower is better)
Translates to: PTSLHSPHLNGGVGSHAPAASFL*ASFSVL
Trigger: AAGTACAGAAAATGACGCCAAGAGAAAGGATGCGGC...AGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp CATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTTGTAGACCCAGGTGGCATCCTCTACAATaGATTCAAGTTCGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: HSPHLNGGVGSHAPCRPRWHPLQ*IQVRGG
Trigger: ACCTCCACGAACTTGAATCAATTGTAGAGGATGCCA...CCTGGGTCTACAAGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp ATCCTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCCAAATTCATCCAGTGTaGGTCAGTTCAGACTTTCCA +
Preference number: 5 (lower is better)
Translates to: ILLEALRAHMREMLFKGAQIHPV*VSSDFP
Trigger: TGGAAAGTCTGAACTGACCAACACTGGATGAATTTG...GGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383366.9
CDS-3UTR CAA 90 bp AGGCATGTCTGGCTTCTGGGCTGTAGCTCAGCATGTTGTAGGCTAGAGTCCAGTGATATCACTGTCCTGTaGGTTTGTTCTGTAAGCAGG +
Preference number: 5 (lower is better)
Translates to: RHVWLLGCSSACCRLESSDITVL*VCSVSR
Trigger: CCTGCTTACAGAACAAACCAACAGGACAGTGATATC...ACTGGACTCTAGCCTACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp AGGTCAGCTAAGACAGGCATGTCTGGCTTCTGGGCTGTAGCTCAGCATGTTGTAAAAACAGTCGCTGGCTaGAGGCACCACTTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: RSAKTGMSGFWAVAQHVVKTVAG*RHHFFQ
Trigger: TTGGAAAAAGTGGTGCCTCAAGCCAGCGACTGTTTT...TACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCTGTCTTAGCTGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAACTTAAAACAGTCGCTGGCTaGAGGCACCACTTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: LEALRAHMREMLFKGAKLKTVAG*RHHFFQ
Trigger: TTGGAAAAAGTGGTGCCTCAAGCCAGCGACTGTTTT...AAGTTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS TCA 90 bp GAACTATCTGTTCACTTGACAACACGCTCCCCCTCGAGGTTTGAGTaGACTTGGGCACTGCGAACACATCTTCTTTATTTCTGCATCCCC +
Preference number: 5 (lower is better)
Translates to: ELSVHLTTRSPSRFE*TWALRTHLLYFCIP
Trigger: GGGGATGCAGAAATAAAGAAGATGTGTTCGCAGTGCCCAAGTTCACTCAAACCTCGAGGGGGAGCGTGTTGTCAAGTGAACAGATAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506695.5
CDS CCA 90 bp GAAATTATCTTGCTCCACAAAACTTGCATGGAACTTGACAATGGCTaGGTGGTCCAGCTTGGAGAGGAGTTGGGCTTCCAAATTGGCCTG +
Preference number: 5 (lower is better)
Translates to: EIILLHKTCMELDNG*VVQLGEELGFQIGL
Trigger: CAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAGCCATTGTCAAGTTCCATGCAAGTTTTGTGGAGCAAGATAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356918.8
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000508196.5
ENST00000510688.5
ENST00000510769.5
ENST00000511262.5
ENST00000514915.5
ENST00000602792.1
CDS-3UTR CAA 90 bp AGGCATGTCTGGCTTCTGGGCTGTAGCTCAGCATGTTGTAGGCTAGAGTCCAGTCTTGGAATTTCAGCATaGCTCCAAACAAGAGAGAAC +
Preference number: 5 (lower is better)
Translates to: RHVWLLGCSSACCRLESSLGISA*LQTREN
Trigger: GTTCTCTCTTGTTTGGAGCAATGCTGAAATTCCAAG...ACTGGACTCTAGCCTACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCACACTTAGCTGCCTCTaGGAATTTCAGCATTGCTCC +
Preference number: 5 (lower is better)
Translates to: EGQKWTKNRSAKTGMSGFTLSCL*EFQHCS
Trigger: GGAGCAATGCTGAAATTCCAAGAGGCAGCTAAGTGT...GAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTGCTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAATTGCAATCAAGGTCTTaGGATAAGTGGAAATGGCTG +
Preference number: 5 (lower is better)
Translates to: LLEALRAHMREMLFKGAKLQSRS*DKWKWL
Trigger: CAGCCATTTCCACTTATCCAAAGACCTTGATTGCAA...TTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTTGTAGACCCAGGGAAGCACGTATCTTCTaGCAATCAAGGTCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: HSPHLNGGVGSHAPCRPREARIF*QSRSLD
Trigger: ATCCAAAGACCTTGATTGCAAGAAGATACGTGCTTC...CCTGGGTCTACAAGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp GTGGGTAAGCAGCCAAGGCCTACTTCACTGCATTCTCCACATCTGAATGGTGGGGAAGCACGTATCTTCTaGCAATCAAGGTCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: VGKQPRPTSLHSPHLNGGEARIF*QSRSLD
Trigger: ATCCAAAGACCTTGATTGCAAGAAGATACGTGCTTC...CCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGGCCTTGGCTGCTTACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp GTGGGTAAGCAGCCAAGGCCTACTTCACTGCATTCTCCACATCTGAATGGTGGGTCCACTGCCAAGTTTTaGTTGAAGCACGTATCTTCT +
Preference number: 5 (lower is better)
Translates to: VGKQPRPTSLHSPHLNGGSTAKF*LKHVSS
Trigger: AGAAGATACGTGCTTCAACAAAAACTTGGCAGTGGA...CCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGGCCTTGGCTGCTTACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp CTGGTCAGGATGTGGGTAAGCAGCCAAGGCCTACTTCACTGCATTCTCCACATCTCCACTGCCAAGTTTTaGTTGAAGCACGTATCTTCT +
Preference number: 5 (lower is better)
Translates to: LVRMWVSSQGLLHCILHISTAKF*LKHVSS
Trigger: AGAAGATACGTGCTTCAACAAAAACTTGGCAGTGGA...GATGTGGAGAATGCAGTGAAGTAGGCCTTGGCTGCTTACCCACATCCTGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp ATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCTCCTACAGGAATTCCTCTCCTCGTTaGGCTTTCTTGTCTGAAACC +
Preference number: 5 (lower is better)
Translates to: IVSHRQPRTVKGMWGSYRNSSPR*AFLSET
Trigger: GGTTTCAGACAAGAAAGCCAAACGAGGAGAGGAATT...CCTGTAGGAGCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp GTAAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCCCTGTACAGTTTCATTaGGATTTAGTTCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: VKGMWGSYRQAKHNHLQVPVQFH*DLVLQQ
Trigger: CTGTTGGAGAACTAAATCCAAATGAAACTGTACAGG...GACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp GTGGGTAAGCAGCCAAGGCCTACTTCACTGCATTCTCCACATCTGAATGGTGGGAGTTGGGCTTCCAAATaGGCCTGTACAGTTTCATTT +
Preference number: 5 (lower is better)
Translates to: VGKQPRPTSLHSPHLNGGSWASK*ACTVSF
Trigger: AAATGAAACTGTACAGGCCAATTTGGAAGCCCAACT...CCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGGCCTTGGCTGCTTACCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp CAGCCAAGGCCTACTTCACTGCATTCTCCACATCTGAATGGTGGGGTAGGGAGTAGTTGGGCTTCCAAATaGGCCTGTACAGTTTCATTT +
Preference number: 5 (lower is better)
Translates to: QPRPTSLHSPHLNGGVGSSWASK*ACTVSF
Trigger: AAATGAAACTGTACAGGCCAATTTGGAAGCCCAACT...ACTCCCTACCCCACCATTCAGATGTGGAGAATGCAGTGAAGTAGGCCTTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp TCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCCAGCTTGGAGAGGAGTaGGGCTTCCAAATTGGCCTG +
Preference number: 5 (lower is better)
Translates to: SDEELKVKMGALLLYPFPQLGEE*GFQIGL
Trigger: CAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCTG...GGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTGCATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTTGTAGACCCTGGCATTTAGTTCTTTaGGATATCTCTCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: LHSPHLNGGVGSHAPCRPWHLVL*DISQGE
Trigger: CTCTCCCTGAGAGATATCCAAAAGAACTAAATGCCA...GGGTCTACAAGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp GTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGAGCTATCTCCCGAGATCTCAATTCTaGCATTCGTTTGCTATTTTC +
Preference number: 5 (lower is better)
Translates to: VGLLQASKAQPPTGLSYLPRSQF*HSFAIF
Trigger: GAAAATAGCAAACGAATGCAAGAATTGAGATCTCGG...GAGATAGCTCAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp AGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGCAGGCTGCCTACCCGAGATCTCAATTCTaGCATTCGTTTGCTATTTTC +
Preference number: 5 (lower is better)
Translates to: SSACCRLESSDLHWQAAYPRSQF*HSFAIF
Trigger: GAAAATAGCAAACGAATGCAAGAATTGAGATCTCGG...GTAGGCAGCCTGCCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCATGGCATCCTCTACAATaGATTCAAGTTCGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: LKIMKSTRLLPGHRQGDSWHPLQ*IQVRGG
Trigger: ACCTCCACGAACTTGAATCAATTGTAGAGGATGCCA...TGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAACTTTGGCATCCTCTACAATaGATTCAAGTTCGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: LEALRAHMREMLFKGAKLWHPLQ*IQVRGG
Trigger: ACCTCCACGAACTTGAATCAATTGTAGAGGATGCCA...AAGTTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTGCATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTTGTAGACCCCAAATTCATCCAGTGTaGGTCAGTTCAGACTTTCCA +
Preference number: 5 (lower is better)
Translates to: LHSPHLNGGVGSHAPCRPQIHPV*VSSDFP
Trigger: TGGAAAGTCTGAACTGACCAACACTGGATGAATTTG...GGGTCTACAAGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511262.5
CDS-3UTR CAA 90 bp CTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCGTCAGGGTGACTCAGATATCACTGTCCTGTaGGTTTGTTCTGTAAGCAGG +
Preference number: 5 (lower is better)
Translates to: LKIMKSTRLLPGHRQGDSDITVL*VCSVSR
Trigger: CCTGCTTACAGAACAAACCAACAGGACAGTGATATC...TGAGTCACCCTGACGATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp AGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGCAGGCTGCCTACTCAAGGGAGCCAAACTaGATCTATAAGCTTATCTCA +
Preference number: 5 (lower is better)
Translates to: SSACCRLESSDLHWQAAYSREPN*IYKLIS
Trigger: TGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTGA...GTAGGCAGCCTGCCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS TCA 90 bp GTGAGTTGCATGGTATCCAAGGTCAGATGTGGCATCCTCTACAATTaGTTCAAGTTCGTGGAGGTCCATGGAAGGAATAGGCTGAGACTC +
Preference number: 5 (lower is better)
Translates to: VSCMVSKVRCGILYN*FKFVEVHGRNRLRL
Trigger: GAGTCTCAGCCTATTCCTTCCATGGACCTCCACGAACTTGAATCAATTGTAGAGGATGCCACATCTGACCTTGGATACCATGCAACTCAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS TCA 90 bp ACAGTCTCCATGGTATCCAAGGTCAGATGTGGCATCCTCTACAATTaGTTCAAGTTCGTGGAGGTCCATGGAAGGAATAGGCTGAGACTC +
Preference number: 5 (lower is better)
Translates to: TVSMVSKVRCGILYN*FKFVEVHGRNRLRL
Trigger: GAGTCTCAGCCTATTCCTTCCATGGACCTCCACGAACTTGAATCAATTGTAGAGGATGCCACATCTGACCTTGGATACCATGGAGACTGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507910.5
CDS GCA 90 bp AGATCTCGGCCCTCACAGTACTCCGTGATAATGCAGAAATTATCTTaGTCCACAAAACTTGCATGGAACTTGACAATGGCTGGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: RSRPSQYSVIMQKLS*STKLAWNLTMAGWS
Trigger: GGACCACCCAGCCATTGTCAAGTTCCATGCAAGTTTTGTGGAGCAAGATAATTTCTGCATTATCACGGAGTACTGTGAGGGCCGAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356918.8
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000508196.5
ENST00000510688.5
ENST00000510769.5
ENST00000511262.5
ENST00000514915.5
ENST00000602792.1
CDS CCA 90 bp GCATGGAACTTGACAATGGCTGGGTGGTCCAGCTTGGAGAGGAGTTaGGCTTCCAAATTGGCCTGTACAGTTTCATTTGGATTTAGTTCT +
Preference number: 5 (lower is better)
Translates to: AWNLTMAGWSSLERS*ASKLACTVSFGFSS
Trigger: AGAACTAAATCCAAATGAAACTGTACAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAGCCATTGTCAAGTTCCATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356918.8
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000508196.5
ENST00000510688.5
ENST00000510769.5
ENST00000511262.5
ENST00000514915.5
ENST00000602792.1
CDS-3UTR CAA 90 bp AGGTCAGCTAAGACAGGCATGTCTGGCTTCTGGGCTGTAGCTCAGCATGTTGTAGAAGCACGTATCTTCTaGCAATCAAGGTCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: RSAKTGMSGFWAVAQHVVEARIF*QSRSLD
Trigger: ATCCAAAGACCTTGATTGCAAGAAGATACGTGCTTC...TACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCTGTCTTAGCTGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp AGGTCAGCTAAGACAGGCATGTCTGGCTTCTGGGCTGTAGCTCAGCATGTTGTAACTGCCAAGTTTTTGTaGAAGCACGTATCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: RSAKTGMSGFWAVAQHVVTAKFL*KHVSSC
Trigger: GCAAGAAGATACGTGCTTCAACAAAAACTTGGCAGT...TACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCTGTCTTAGCTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTGGAAGCCCTGAGGGCGCACATGAGAGAAATGCTTTTCAAGGGAGCCAAACTTTCCACTGCCAAGTTTTaGTTGAAGCACGTATCTTCT +
Preference number: 5 (lower is better)
Translates to: LEALRAHMREMLFKGAKLSTAKF*LKHVSS
Trigger: AGAAGATACGTGCTTCAACAAAAACTTGGCAGTGGA...AAGTTTGGCTCCCTTGAAAAGCATTTCTCTCATGTGCGCCCTCAGGGCTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GGCAGGTTCTCTAAAGTTGGTTCATCAGATTCCTCTTCCCTGCCTTGCCACCTCAGTTGGGCTTCCAAATaGGCCTGTACAGTTTCATTT +
Preference number: 5 (lower is better)
Translates to: GRFSKVGSSDSSSLPCHLSWASK*ACTVSF
Trigger: AAATGAAACTGTACAGGCCAATTTGGAAGCCCAACT...GAGGTGGCAAGGCAGGGAAGAGGAATCTGATGAACCAACTTTAGAGAACCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514915.5
CDS-3UTR CAA 90 bp CATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGCTGGGTGGTCCAGCTaGGAGAGGAGTTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: HLKRRGDIVSHRQPRTVKAGWSS*ERSWAS
Trigger: GGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAGC...CTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp AGCTCAGCATGTTGTAGGCTAGAGTCCAGTGACCTTCACTGGCAGGCTGCCTACCTTAATGAAGGATTCTaGTTCAACATGCTTTCCATG +
Preference number: 5 (lower is better)
Translates to: SSACCRLESSDLHWQAAYLNEGF*FNMLSM
Trigger: CATGGAAAGCATGTTGAACAAGAATCCTTCATTAAG...GTAGGCAGCCTGCCAGTGAAGGTCACTGGACTCTAGCCTACAACATGCTGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp AAAGGGCATGTGGGGCTCCTACAGGCAAGCAAAGCACAACCACCTACAGGTCTGCTTAATGAAGGATTCTaGTTCAACATGCTTTCCATG +
Preference number: 5 (lower is better)
Translates to: KGHVGLLQASKAQPPTGLLNEGF*FNMLSM
Trigger: CATGGAAAGCATGTTGAACAAGAATCCTTCATTAAG...CAGACCTGTAGGTGGTTGTGCTTTGCTTGCCTGTAGGAGCCCCACATGCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp CATTCTCCACATCTGAATGGTGGGGTAGGGAGTCATGCTCCTTGTAGACCCAGGCCGAGATCTCAATTCTaGCATTCGTTTGCTATTTTC +
Preference number: 5 (lower is better)
Translates to: HSPHLNGGVGSHAPCRPRPRSQF*HSFAIF
Trigger: GAAAATAGCAAACGAATGCAAGAATTGAGATCTCGG...CCTGGGTCTACAAGGAGCATGACTCCCTACCCCACCATTCAGATGTGGAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp AGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGGGCATGTGGGGCTGGCATCCTCTACAATaGATTCAAGTTCGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: RGDIVSHRQPRTVKGMWGWHPLQ*IQVRGG
Trigger: ACCTCCACGAACTTGAATCAATTGTAGAGGATGCCA...GCCCCACATGCCCTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp AAAGTACAGGAGCTGGTCCACTTCAAAACAGTCGCTGGCTTGAGGCACCACTTTCAAATTCATCCAGTGTaGGTCAGTTCCTTTCCCTGT +
Preference number: 5 (lower is better)
Translates to: KVQELVHFKTVAGLRHHFQIHPV*VSSFPC
Trigger: ACAGGGAAAGGAACTGACCAACACTGGATGAATTTG...AAAGTGGTGCCTCAAGCCAGCGACTGTTTTGAAGTGGACCAGCTCCTGTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS TCA 90 bp ACATTTACATTTTGGCAAAGCAGGTTAACGTTTATTGAGGGGCACTaGGACTGGAGTACATCCGGAGGTAAGATGTCCAGGAAAGCGAGG +
Preference number: 5 (lower is better)
Translates to: TFTFWQSRLTFIEGH*DWSTSGGKMSRKAR
Trigger: CCTCGCTTTCCTGGACATCTTACCTCCGGATGTACTCCAGTCTCAGTGCCCCTCAATAAACGTTAACCTGCTTTGCCAAAATGTAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506695.5
ENST00000513550.1
CDS TCA 90 bp CGTCCAGATCTCGGCCAATTCCTCTCCTCGTTTGGCTTTCTTGTCTaGAACCAGATAGACAGTTCCAAAACTTCCACTGCCAAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: RPDLGQFLSSFGFLV*NQIDSSKTSTAKFL
Trigger: CAAAAACTTGGCAGTGGAAGTTTTGGAACTGTCTATCTGGTTTCAGACAAGAAAGCCAAACGAGGAGAGGAATTGGCCGAGATCTGGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510474.5
CDS CCA 90 bp ATGGCTGATCTAGAGAAGTGCAACCCAGGACATTTTCCAAACACCTaGCCAACGCTTCGATATCACTGTCCTGTTGGTTTGTTCTGTAAG +
Preference number: 5 (lower is better)
Translates to: MADLEKCNPGHFPNT*PTLRYHCPVGLFCK
Trigger: CTTACAGAACAAACCAACAGGACAGTGATATCGAAGCGTTGGCCAGGTGTTTGGAAAATGTCCTGGGTTGCACTTCTCTAGATCAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510688.5
CDS-3UTR CAA 90 bp ATCACTGTCCTGTTGGTTTGTTCTGTAAGCAGGCTGGGATCCCTCATTCCTGATAATTCCTCTCCTCGTTaGGCTTTCTTGTCTGAAACC +
Preference number: 5 (lower is better)
Translates to: ITVLLVCSVSRLGSLIPDNSSPR*AFLSET
Trigger: GGTTTCAGACAAGAAAGCCAAACGAGGAGAGGAATT...ATCAGGAATGAGGGATCCCAGCCTGCTTACAGAACAAACCAACAGGACAGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CAA 90 bp AGCTCTGTCCTCCAGCTGAAAATAATGAAGAGCACACGGCTTCTCCCCGGTCATCCTGTACAGTTTCATTaGGATTTAGTTCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: SSVLQLKIMKSTRLLPGHPVQFH*DLVLQQ
Trigger: CTGTTGGAGAACTAAATCCAAATGAAACTGTACAGG...ATGACCGGGGAGAAGCCGTGTGCTCTTCATTATTTTCAGCTGGAGGACAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCACAGCTTGGAGAGGAGTaGGGCTTCCAAATTGGCCTG +
Preference number: 5 (lower is better)
Translates to: HISSLLVMEGQKWTKNRSQLGEE*GFQIGL
Trigger: CAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCTG...TGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTTCACAATAGGAATCAAATGCATCAGCGTAGTACTCTTCAGCCACAAGTGGGTCTTTGTGTCATAGCCTaGGTGTTTCAGAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LHNRNQMHQRSTLQPQVGLCVIA*VFQSLR
Trigger: CCTGAGGCTCTGAAACACCAAGGCTATGACACAAAG...ACCCACTTGTGGCTGAAGAGTACTACGCTGATGCATTTGATTCCTATTGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTGGTCAGGATGTGGGTAAGCAGCCAAGGCCTACTTCACTGCATTCTCCACATCCAGGTGGATCCTTTTTaGCATGGCATTAATTATATG +
Preference number: 5 (lower is better)
Translates to: LVRMWVSSQGLLHCILHIQVDPF*HGINYM
Trigger: CATATAATTAATGCCATGCAAAAAAGGATCCACCTG...GATGTGGAGAATGCAGTGAAGTAGGCCTTGGCTGCTTACCCACATCCTGACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp AGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTCACTGTCCTGTTGGTTaGTTCTGTAAGCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SQDGSSAFVSIPHNRVQLHCPVG*FCKQAG
Trigger: CCCAGCCTGCTTACAGAACAAACCAACAGGACAGTG...AAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ATGGAGTACATCAACACTCAGCTGCTGAAAGTTCCGAGATCTCAATTCTTGCATCACTGTCCTGTTGGTTaGTTCTGTAAGCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: MEYINTQLLKVPRSQFLHHCPVG*FCKQAG
Trigger: CCCAGCCTGCTTACAGAACAAACCAACAGGACAGTG...ATGCAAGAATTGAGATCTCGGAACTTTCAGCAGCTGAGTGTTGATGTACTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTCATGCGTTTCATCTaGGTCCTGGCCATCACACTG +
Preference number: 5 (lower is better)
Translates to: LSKEASTSDEELKVKMGALMRFI*VLAITL
Trigger: CAGTGTGATGGCCAGGACCAAGATGAAACGCATGAG...AGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCGCCAGATGTCCGACTTaGTGTCATAGCCTTGGTGTT +
Preference number: 5 (lower is better)
Translates to: ISGYSPNNTYDSKHRQPCARCPT*CHSLGV
Trigger: AACACCAAGGCTATGACACAAAGTCGGACATCTGGC...GCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510769.5
CDS TCA 90 bp TCTAGAACTATCTGTTCACTTGACAACACGCTCCCCCTCGAGGTTTaGGTGAACTTGGGCACTGCGAACACATCTTCTTTATTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: SRTICSLDNTLPLEV*VNLGTANTSSLFLH
Trigger: ATGCAGAAATAAAGAAGATGTGTTCGCAGTGCCCAAGTTCACTCAAACCTCGAGGGGGAGCGTGTTGTCAAGTGAACAGATAGTTCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506695.5
CDS CCA 90 bp CAATGGCTGGGTGGTCCAGCTTGGAGAGGAGTTGGGCTTCCAAATTaGCCTGTACAGTTTCATTTGGATTTAGTTCTCCAACAGATATTT +
Preference number: 5 (lower is better)
Translates to: QWLGGPAWRGVGLPN*PVQFHLDLVLQQIF
Trigger: AAATATCTGTTGGAGAACTAAATCCAAATGAAACTGTACAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAGCCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356918.8
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000508196.5
ENST00000510688.5
ENST00000510769.5
ENST00000511262.5
ENST00000514915.5
ENST00000602792.1
CDS CCA 90 bp AAGTTACTACCTTGTGCAAACTACCCGTTCTCGGTGAAACAGATCTaGCTGGGGGCAAAAGACAACGGAAGGAGTATTTATCACAAGTTG +
Preference number: 5 (lower is better)
Translates to: KLLPCANYPFSVKQI*LGAKDNGRSIYHKL
Trigger: CAACTTGTGATAAATACTCCTTCCGTTGTCTTTTGCCCCCAGCCAGATCTGTTTCACCGAGAACGGGTAGTTTGCACAAGGTAGTAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506695.5
CDS-3UTR CAA 90 bp TCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGAAACTTGCATGGAACTaGACAATGGCTGGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: SKEASTSDEELKVKMGALKLAWN*TMAGWS
Trigger: GGACCACCCAGCCATTGTCAAGTTCCATGCAAGTTT...CAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CCACTTGAACTTCTGCTTCTTTTTGATAGTTGCCTAGAGATGGTTCTGGAGAGTCTTTGTGTCATAGCCTaGGTGTTTCAGAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: PLELLLLFDSCLEMVLESLCVIA*VFQSLR
Trigger: CCTGAGGCTCTGAAACACCAAGGCTATGACACAAAG...ACTCTCCAGAACCATCTCTAGGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ATCACTGTCCTGTTGGTTTGTTCTGTAAGCAGGCTGGGATCCCTCATTCCTGATTGGCATTTAGTTCTTTaGGATATCTCTCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: ITVLLVCSVSRLGSLIPDWHLVL*DISQGE
Trigger: CTCTCCCTGAGAGATATCCAAAAGAACTAAATGCCA...ATCAGGAATGAGGGATCCCAGCCTGCTTACAGAACAAACCAACAGGACAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CAA 90 bp AAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAGGCATGTCTGGCTTCTTGGCATTTAGTTCTTTaGGATATCTCTCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: KGKSGPKTGQLRQACLASWHLVL*DISQGE
Trigger: CTCTCCCTGAGAGATATCCAAAAGAACTAAATGCCA...AGAAGCCAGACATGCCTGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp TGCTTCGCTAGCATTCTGATGCCTTGCTCTCTTGAGGTAATTATAGACCTCTTCGCCGCATCCTTTCTCTaGGCGTCATTTTCTGTACTT +
Preference number: 5 (lower is better)
Translates to: CFASILMPCSLEVIIDLFAASFL*ASFSVL
Trigger: AAGTACAGAAAATGACGCCAAGAGAAAGGATGCGGC...GAAGAGGTCTATAATTACCTCAAGAGAGCAAGGCATCAGAATGCTAGCGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CAA 90 bp TTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATCACTGTCCTGTTGGTTaGTTCTGTAAGCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: LSQGIVQITLMTPSIGSHHCPVG*FCKQAG
Trigger: CCCAGCCTGCTTACAGAACAAACCAACAGGACAGTG...ATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp TCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAACACTTAGCTGCCTCTaGGAATTTCAGCATTGCTCC +
Preference number: 5 (lower is better)
Translates to: SLLVMEGQKWTKNRSAKTTLSCL*EFQHCS
Trigger: GGAGCAATGCTGAAATTCCAAGAGGCAGCTAAGTGT...TGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAAAACTTGCATGGAACTaGACAATGGCTGGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: GIESQDGSSAFVSIPHNRKLAWN*TMAGWS
Trigger: GGACCACCCAGCCATTGTCAAGTTCCATGCAAGTTT...TCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATAAAACTTGCATGGAACTaGACAATGGCTGGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: QDGSSAFVSIPHNRVQLIKLAWN*TMAGWS
Trigger: GGACCACCCAGCCATTGTCAAGTTCCATGCAAGTTT...TATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGACTTTGTGTCATAGCCTaGGTGTTTCAGAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LLSKEASTSDEELKVKMGLCVIA*VFQSLR
Trigger: CCTGAGGCTCTGAAACACCAAGGCTATGACACAAAG...TCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp TCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACCAGATGTCCGACTTaGTGTCATAGCCTTGGTGTT +
Preference number: 5 (lower is better)
Translates to: SSLLVMEGQKWTKNRSAKTRCPT*CHSLGV
Trigger: AACACCAAGGCTATGACACAAAGTCGGACATCTGGT...CTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCGATATCACTGTCCTGTaGGTTTGTTCTGTAAGCAGG +
Preference number: 5 (lower is better)
Translates to: ISGYSPNNTYDSKHRQPCDITVL*VCSVSR
Trigger: CCTGCTTACAGAACAAACCAACAGGACAGTGATATC...GCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp TCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGAAAACAGTCGCTGGCTaGAGGCACCACTTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: SKEASTSDEELKVKMGALKTVAG*RHHFFQ
Trigger: TTGGAAAAAGTGGTGCCTCAAGCCAGCGACTGTTTT...CAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS TCA 90 bp GTATCTTCTTGCAATCAAGGTCTTTGGATAAGTGGAAATGGCTGTTaGTCCACTCACACACTTAGCTGCCTCTTGGAATTTCAGCATTGC +
Preference number: 5 (lower is better)
Translates to: VSSCNQGLWISGNGC*STHTLSCLLEFQHC
Trigger: GCAATGCTGAAATTCCAAGAGGCAGCTAAGTGTGTGAGTGGATCAACAGCCATTTCCACTTATCCAAAGACCTTGATTGCAAGAAGATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356918.8
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000507967.1
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000511262.5
ENST00000513550.1
ENST00000514915.5
CDS-3UTR CAA 90 bp ACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCACACTTAGCTGCCTCTaGGAATTTCAGCATTGCTCC +
Preference number: 5 (lower is better)
Translates to: TSDEELKVKMGALLLYPFTLSCL*EFQHCS
Trigger: GGAGCAATGCTGAAATTCCAAGAGGCAGCTAAGTGT...GAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAACACTTAGCTGCCTCTaGGAATTTCAGCATTGCTCC +
Preference number: 5 (lower is better)
Translates to: LLSKEASTSDEELKVKMGTLSCL*EFQHCS
Trigger: GGAGCAATGCTGAAATTCCAAGAGGCAGCTAAGTGT...TCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTTCACAATAGGAATCAAATGCATCAGCGTAGTACTCTTCAGCCACAAGTGGGTTCCACTGCCAAGTTTTaGTTGAAGCACGTATCTTCT +
Preference number: 5 (lower is better)
Translates to: LHNRNQMHQRSTLQPQVGSTAKF*LKHVSS
Trigger: AGAAGATACGTGCTTCAACAAAAACTTGGCAGTGGA...ACCCACTTGTGGCTGAAGAGTACTACGCTGATGCATTTGATTCCTATTGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTAATTCCTCTCCTCGTTaGGCTTTCTTGTCTGAAACC +
Preference number: 5 (lower is better)
Translates to: LSKEASTSDEELKVKMGANSSPR*AFLSET
Trigger: GGTTTCAGACAAGAAAGCCAAACGAGGAGAGGAATT...AGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ATTAATTATATGAGCAGCCTCCTTCTGACAATCCAAATTTTTGTCTTCCAGAGTCAGCTTGGAGAGGAGTaGGGCTTCCAAATTGGCCTG +
Preference number: 5 (lower is better)
Translates to: INYMSSLLLTIQIFVFQSQLGEE*GFQIGL
Trigger: CAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCTG...ACTCTGGAAGACAAAAATTTGGATTGTCAGAAGGAGGCTGCTCATATAATTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514915.5
CDS-3UTR CAA 90 bp CTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTAAACTTGCATGGAACTaGACAATGGCTGGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: LGHLKRRGDIVSHRQPRTKLAWN*TMAGWS
Trigger: GGACCACCCAGCCATTGTCAAGTTCCATGCAAGTTT...AGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp ACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCACCAGATGTCCGACTTaGTGTCATAGCCTTGGTGTT +
Preference number: 5 (lower is better)
Translates to: TSDEELKVKMGALLLYPFTRCPT*CHSLGV
Trigger: AACACCAAGGCTATGACACAAAGTCGGACATCTGGT...GAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ACACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCACCAGATGTCCGACTTaGTGTCATAGCCTTGGTGTT +
Preference number: 5 (lower is better)
Translates to: THIFLISHGRAKVDQKQVTRCPT*CHSLGV
Trigger: AACACCAAGGCTATGACACAAAGTCGGACATCTGGT...GACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAGCCGCATCCTTTCTCTaGGCGTCATTTTCTGTACTT +
Preference number: 5 (lower is better)
Translates to: HISSLLVMEGQKWTKNRSAASFL*ASFSVL
Trigger: AAGTACAGAAAATGACGCCAAGAGAAAGGATGCGGC...TGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGCCGCATCCTTTCTCTaGGCGTCATTTTCTGTACTT +
Preference number: 5 (lower is better)
Translates to: EELKVKMGALLLYPFPIIAASFL*ASFSVL
Trigger: AAGTACAGAAAATGACGCCAAGAGAAAGGATGCGGC...TATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp TATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCACTGTCCTGTTGGTTaGTTCTGTAAGCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: YKLISGYSPNNTYDSKHRHCPVG*FCKQAG
Trigger: CCCAGCCTGCTTACAGAACAAACCAACAGGACAGTG...CCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CCACTTGAACTTCTGCTTCTTTTTGATAGTTGCCTAGAGATGGTTCTGGAGAGTGATATCACTGTCCTGTaGGTTTGTTCTGTAAGCAGG +
Preference number: 5 (lower is better)
Translates to: PLELLLLFDSCLEMVLESDITVL*VCSVSR
Trigger: CCTGCTTACAGAACAAACCAACAGGACAGTGATATC...ACTCTCCAGAACCATCTCTAGGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAAAAACAGTCGCTGGCTaGAGGCACCACTTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: HISSLLVMEGQKWTKNRSKTVAG*RHHFFQ
Trigger: TTGGAAAAAGTGGTGCCTCAAGCCAGCGACTGTTTT...TGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS TCA 90 bp TCTGGCTGGGGGCAAAAGACAACGGAAGGAGTATTTATCACAAGTTaGAAACCAGTAGTTATCTTCCCAGGTAATAAGAGGAAGGCAATT +
Preference number: 5 (lower is better)
Translates to: SGWGQKTTEGVFITS*KPVVIFPGNKRKAI
Trigger: AATTGCCTTCCTCTTATTACCTGGGAAGATAACTACTGGTTTTCAACTTGTGATAAATACTCCTTCCGTTGTCTTTTGCCCCCAGCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506695.5
CDS-3UTR CAA 90 bp CTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTTGGAATTTCAGCATaGCTCCAAACAAGAGAGAAC +
Preference number: 5 (lower is better)
Translates to: LSKEASTSDEELKVKMGALGISA*LQTREN
Trigger: GTTCTCTCTTGTTTGGAGCAATGCTGAAATTCCAAG...AGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTACACTTAGCTGCCTCTaGGAATTTCAGCATTGCTCC +
Preference number: 5 (lower is better)
Translates to: LGHLKRRGDIVSHRQPRTTLSCL*EFQHCS
Trigger: GGAGCAATGCTGAAATTCCAAGAGGCAGCTAAGTGT...AGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp CCACTTGAACTTCTGCTTCTTTTTGATAGTTGCCTAGAGATGGTTCTGGAGAGTTTGCAATCAAGGTCTTaGGATAAGTGGAAATGGCTG +
Preference number: 5 (lower is better)
Translates to: PLELLLLFDSCLEMVLESLQSRS*DKWKWL
Trigger: CAGCCATTTCCACTTATCCAAAGACCTTGATTGCAA...ACTCTCCAGAACCATCTCTAGGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp TCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGTCCACTGCCAAGTTTTaGTTGAAGCACGTATCTTCT +
Preference number: 5 (lower is better)
Translates to: SKEASTSDEELKVKMGALSTAKF*LKHVSS
Trigger: AGAAGATACGTGCTTCAACAAAAACTTGGCAGTGGA...CAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp AGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTTCCACTGCCAAGTTTTaGTTGAAGCACGTATCTTCT +
Preference number: 5 (lower is better)
Translates to: SQDGSSAFVSIPHNRVQLSTAKF*LKHVSS
Trigger: AGAAGATACGTGCTTCAACAAAAACTTGGCAGTGGA...AAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCAATTCCTCTCCTCGTTaGGCTTTCTTGTCTGAAACC +
Preference number: 5 (lower is better)
Translates to: TSDEELKVKMGALLLYPFNSSPR*AFLSET
Trigger: GGTTTCAGACAAGAAAGCCAAACGAGGAGAGGAATT...GAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp TCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACAAGTTGGGCTTCCAAATaGGCCTGTACAGTTTCATTT +
Preference number: 5 (lower is better)
Translates to: SLLVMEGQKWTKNRSAKTSWASK*ACTVSF
Trigger: AAATGAAACTGTACAGGCCAATTTGGAAGCCCAACT...TGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GTGTGTATGAAATACACACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGCTTTGTGTCATAGCCTaGGTGTTTCAGAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: VCMKYTHIFLISHGRAKVLCVIA*VFQSLR
Trigger: CCTGAGGCTCTGAAACACCAAGGCTATGACACAAAG...CACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTGTGTATTTCATACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp TATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCTTTGTGTCATAGCCTaGGTGTTTCAGAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: YKLISGYSPNNTYDSKHRLCVIA*VFQSLR
Trigger: CCTGAGGCTCTGAAACACCAAGGCTATGACACAAAG...CCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCCCGAGATCTCAATTCTaGCATTCGTTTGCTATTTTC +
Preference number: 5 (lower is better)
Translates to: ISGYSPNNTYDSKHRQPCPRSQF*HSFAIF
Trigger: GAAAATAGCAAACGAATGCAAGAATTGAGATCTCGG...GCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCTGGCATCCTCTACAATaGATTCAAGTTCGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: TSDEELKVKMGALLLYPFWHPLQ*IQVRGG
Trigger: ACCTCCACGAACTTGAATCAATTGTAGAGGATGCCA...GAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp TTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATTGGCATCCTCTACAATaGATTCAAGTTCGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: LSQGIVQITLMTPSIGSHWHPLQ*IQVRGG
Trigger: ACCTCCACGAACTTGAATCAATTGTAGAGGATGCCA...ATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATATGTTGGCATCCTCTACAATaGATTCAAGTTCGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: DGSSAFVSIPHNRVQLICWHPLQ*IQVRGG
Trigger: ACCTCCACGAACTTGAATCAATTGTAGAGGATGCCA...ACATATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATCACTGTCCTGTTGGTTaGTTCTGTAAGCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: IYKLISGYSPNNTYDSKHHCPVG*FCKQAG
Trigger: CCCAGCCTGCTTACAGAACAAACCAACAGGACAGTG...ATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp AGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCAGATATCACTGTCCTGTaGGTTTGTTCTGTAAGCAGG +
Preference number: 5 (lower is better)
Translates to: STSDEELKVKMGALLLYPDITVL*VCSVSR
Trigger: CCTGCTTACAGAACAAACCAACAGGACAGTGATATC...TGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp TCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATACTCATGCGTTTCATCTaGGTCCTGGCCATCACACTG +
Preference number: 5 (lower is better)
Translates to: SISLSQGIVQITLMTPSILMRFI*VLAITL
Trigger: CAGTGTGATGGCCAGGACCAAGATGAAACGCATGAG...TATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp AGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTAAAACAGTCGCTGGCTaGAGGCACCACTTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: REPNLIYKLISGYSPNNTKTVAG*RHHFFQ
Trigger: TTGGAAAAAGTGGTGCCTCAAGCCAGCGACTGTTTT...AGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp AGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATGGGAGCTCTGCTTTaGTATCCATTCCCCATAATA +
Preference number: 5 (lower is better)
Translates to: SQDGSSAFVSIPHNRVQLMGALL*YPFPII
Trigger: TATTATGGGGAATGGATACAAAAGCAGAGCTCCCAT...AAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCTCAAGGGAGCCAAACTaGATCTATAAGCTTATCTCA +
Preference number: 5 (lower is better)
Translates to: ISGYSPNNTYDSKHRQPCSREPN*IYKLIS
Trigger: TGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTGA...GCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp TCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCTCAAGGGAGCCAAACTaGATCTATAAGCTTATCTCA +
Preference number: 5 (lower is better)
Translates to: SDEELKVKMGALLLYPFPSREPN*IYKLIS
Trigger: TGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTGA...GGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTTCACAATAGGAATCAAATGCATCAGCGTAGTACTCTTCAGCCACAAGTGGGTTCAAGGGAGCCAAACTaGATCTATAAGCTTATCTCA +
Preference number: 5 (lower is better)
Translates to: LHNRNQMHQRSTLQPQVGSREPN*IYKLIS
Trigger: TGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTGA...ACCCACTTGTGGCTGAAGAGTACTACGCTGATGCATTTGATTCCTATTGTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGACAAATTCATCCAGTGTaGGTCAGTTCCTTTCCCTGT +
Preference number: 5 (lower is better)
Translates to: LLSKEASTSDEELKVKMGQIHPV*VSSFPC
Trigger: ACAGGGAAAGGAACTGACCAACACTGGATGAATTTG...TCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ACACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCCTTGGAATTTCAGCATaGCTCCAAACAAGAGAGAAC +
Preference number: 5 (lower is better)
Translates to: THIFLISHGRAKVDQKQVLGISA*LQTREN
Trigger: GTTCTCTCTTGTTTGGAGCAATGCTGAAATTCCAAG...GACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp AGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTGCAATCAAGGTCTTaGGATAAGTGGAAATGGCTG +
Preference number: 5 (lower is better)
Translates to: STSDEELKVKMGALLLYPLQSRS*DKWKWL
Trigger: CAGCCATTTCCACTTATCCAAAGACCTTGATTGCAA...TGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGATTGCAATCAAGGTCTTaGGATAAGTGGAAATGGCTG +
Preference number: 5 (lower is better)
Translates to: LLSKEASTSDEELKVKMGLQSRS*DKWKWL
Trigger: CAGCCATTTCCACTTATCCAAAGACCTTGATTGCAA...TCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGAAGCACGTATCTTCTaGCAATCAAGGTCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: GIESQDGSSAFVSIPHNREARIF*QSRSLD
Trigger: ATCCAAAGACCTTGATTGCAAGAAGATACGTGCTTC...TCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATATGTGAAGCACGTATCTTCTaGCAATCAAGGTCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: DGSSAFVSIPHNRVQLICEARIF*QSRSLD
Trigger: ATCCAAAGACCTTGATTGCAAGAAGATACGTGCTTC...ACATATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAACTGCCAAGTTTTTGTaGAAGCACGTATCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: GIESQDGSSAFVSIPHNRTAKFL*KHVSSC
Trigger: GCAAGAAGATACGTGCTTCAACAAAAACTTGGCAGT...TCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATATGTTCCACTGCCAAGTTTTaGTTGAAGCACGTATCTTCT +
Preference number: 5 (lower is better)
Translates to: DGSSAFVSIPHNRVQLICSTAKF*LKHVSS
Trigger: AGAAGATACGTGCTTCAACAAAAACTTGGCAGTGGA...ACATATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp TCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCAGCTAAGACACCTGTACAGTTTCATTaGGATTTAGTTCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: SLLVMEGQKWTKNRSAKTPVQFH*DLVLQQ
Trigger: CTGTTGGAGAACTAAATCCAAATGAAACTGTACAGG...TGTCTTAGCTGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAGGCAGCCATGCCAGGTGGATCCTTTTTaGCATGGCATTAATTATATG +
Preference number: 5 (lower is better)
Translates to: ISGYSPNNTYDSKHRQPCQVDPF*HGINYM
Trigger: CATATAATTAATGCCATGCAAAAAAGGATCCACCTG...GCATGGCTGCCTATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp TCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCCAGGTGGATCCTTTTTaGCATGGCATTAATTATATG +
Preference number: 5 (lower is better)
Translates to: SDEELKVKMGALLLYPFPQVDPF*HGINYM
Trigger: CATATAATTAATGCCATGCAAAAAAGGATCCACCTG...GGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTACTCTCTAAAGAAGCCAGTACTTCTGATGAGGAATTGAAAGTCAAGATGGGAATGGGAGCTCTGCTTTaGTATCCATTCCCCATAATA +
Preference number: 5 (lower is better)
Translates to: LLSKEASTSDEELKVKMGMGALL*YPFPII
Trigger: TATTATGGGGAATGGATACAAAAGCAGAGCTCCCAT...TCCCATCTTGACTTTCAATTCCTCATCAGAAGTACTGGCTTCTTTAGAGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTTTGCAATCAAGGTCTTaGGATAAGTGGAAATGGCTG +
Preference number: 5 (lower is better)
Translates to: LGHLKRRGDIVSHRQPRTLQSRS*DKWKWL
Trigger: CAGCCATTTCCACTTATCCAAAGACCTTGATTGCAA...AGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp TCAGCTGCTGAAAGTTCCGAGATCTCAATTCTTGCATTCGTTTGCTATTTTCTTGAAGCACGTATCTTCTaGCAATCAAGGTCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: SAAESSEISILAFVCYFLEARIF*QSRSLD
Trigger: ATCCAAAGACCTTGATTGCAAGAAGATACGTGCTTC...AAGAAAATAGCAAACGAATGCAAGAATTGAGATCTCGGAACTTTCAGCAGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510474.5
ENST00000514915.5
CDS-3UTR CAA 90 bp TTTCCACTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCACTGCCAAGTTTTTGTaGAAGCACGTATCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: FPLGHLKRRGDIVSHRQPTAKFL*KHVSSC
Trigger: GCAAGAAGATACGTGCTTCAACAAAAACTTGGCAGT...GGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAGTGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp CAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATACCTGTACAGTTTCATTaGGATTTAGTTCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: QDGSSAFVSIPHNRVQLIPVQFH*DLVLQQ
Trigger: CTGTTGGAGAACTAAATCCAAATGAAACTGTACAGG...TATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATATGTCCGAGATCTCAATTCTaGCATTCGTTTGCTATTTTC +
Preference number: 5 (lower is better)
Translates to: DGSSAFVSIPHNRVQLICPRSQF*HSFAIF
Trigger: GAAAATAGCAAACGAATGCAAGAATTGAGATCTCGG...ACATATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCCCATAATAGATCAAGGGAGCCAAACTaGATCTATAAGCTTATCTCA +
Preference number: 5 (lower is better)
Translates to: GIESQDGSSAFVSIPHNRSREPN*IYKLIS
Trigger: TGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTGA...TCTATTATGGGGAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATATGTTAAACAAATTCATCCAGTGTaGGTCAGTTCCTTTCCCTGT +
Preference number: 5 (lower is better)
Translates to: GALLLYPFPIIEFSLYVKQIHPV*VSSFPC
Trigger: ACAGGGAAAGGAACTGACCAACACTGGATGAATTTG...TTTAACATATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp AAATGCTTTTCAAGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTCAAATTCATCCAGTGTaGGTCAGTTCCTTTCCCTGT +
Preference number: 5 (lower is better)
Translates to: KCFSREPNLIYKLISGYSQIHPV*VSSFPC
Trigger: ACAGGGAAAGGAACTGACCAACACTGGATGAATTTG...ACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTGAAAAGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTCAAATTCATCCAGTGTaGGTCAGTTCCTTAAAGATG +
Preference number: 5 (lower is better)
Translates to: LGHLKRRGDIVSHRQPRTQIHPV*VSSLKM
Trigger: CATCTTTAAGGAACTGACCAACACTGGATGAATTTG...AGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356918.8
CDS-3UTR CAA 90 bp GTGTGTATGAAATACACACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGTTGCAATCAAGGTCTTaGGATAAGTGGAAATGGCTG +
Preference number: 5 (lower is better)
Translates to: VCMKYTHIFLISHGRAKVLQSRS*DKWKWL
Trigger: CAGCCATTTCCACTTATCCAAAGACCTTGATTGCAA...CACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTGTGTATTTCATACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATATGTTAAAGAAGCACGTATCTTCTaGCAATCAAGGTCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: GALLLYPFPIIEFSLYVKEARIF*QSRSLD
Trigger: ATCCAAAGACCTTGATTGCAAGAAGATACGTGCTTC...TTTAACATATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp TCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATAAATTCCTCTCCTCGTTaGGCTTTCTTGTCTGAAACC +
Preference number: 5 (lower is better)
Translates to: SISLSQGIVQITLMTPSINSSPR*AFLSET
Trigger: GGTTTCAGACAAGAAAGCCAAACGAGGAGAGGAATT...TATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp AAATGCTTTTCAAGGGAGCCAAACTTGATCTATAAGCTTATCTCAGGGTATAGTAGTTGGGCTTCCAAATaGGCCTGTACAGTTTCATTT +
Preference number: 5 (lower is better)
Translates to: KCFSREPNLIYKLISGYSSWASK*ACTVSF
Trigger: AAATGAAACTGTACAGGCCAATTTGGAAGCCCAACT...ACTATACCCTGAGATAAGCTTATAGATCAAGTTTGGCTCCCTTGAAAAGCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CACATATCTTCCTTATTAGTCATGGAAGGGCAAAAGTGGACCAAAAACAGGTCACTTAATGAAGGATTCTaGTTCAACATGCTTTCCATG +
Preference number: 5 (lower is better)
Translates to: HISSLLVMEGQKWTKNRSLNEGF*FNMLSM
Trigger: CATGGAAAGCATGTTGAACAAGAATCCTTCATTAAG...TGACCTGTTTTTGGTCCACTTTTGCCCTTCCATGACTAATAAGGAAGATATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ACTTCTGATGAGGAATTGAAAGTCAAGATGGGAGCTCTGCTTTTGTATCCATTCCAGGTGGATCCTTTTTaGCATGGCATTAATTATATG +
Preference number: 5 (lower is better)
Translates to: TSDEELKVKMGALLLYPFQVDPF*HGINYM
Trigger: CATATAATTAATGCCATGCAAAAAAGGATCCACCTG...GAATGGATACAAAAGCAGAGCTCCCATCTTGACTTTCAATTCCTCATCAGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ATTTGTCCACTTGAACTTCTGCTTCTTTTTGATAGTTGCCTAGAGATGGTTCTGCCGAGATCTCAATTCTaGCATTCGTTTGCTATTTTC +
Preference number: 5 (lower is better)
Translates to: ICPLELLLLFDSCLEMVLPRSQF*HSFAIF
Trigger: GAAAATAGCAAACGAATGCAAGAATTGAGATCTCGG...CAGAACCATCTCTAGGCAACTATCAAAAAGAAGCAGAAGTTCAAGTGGACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp ATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATACTGCCAAGTTTTTGTaGAAGCACGTATCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: IYKLISGYSPNNTYDSKHTAKFL*KHVSSC
Trigger: GCAAGAAGATACGTGCTTCAACAAAAACTTGGCAGT...ATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp GGAGCTCTGCTTTTGTATCCATTCCCCATAATAGAGTTCAGCTTATATGTTAAACCTGTACAGTTTCATTaGGATTTAGTTCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: GALLLYPFPIIEFSLYVKPVQFH*DLVLQQ
Trigger: CTGTTGGAGAACTAAATCCAAATGAAACTGTACAGG...TTTAACATATAAGCTGAACTCTATTATGGGGAATGGATACAAAAGCAGAGCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS-3UTR CAA 90 bp CATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTGTAAAGCCTGTACAGTTTCATTaGGATTTAGTTCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: HLKRRGDIVSHRQPRTVKPVQFH*DLVLQQ
Trigger: CTGTTGGAGAACTAAATCCAAATGAAACTGTACAGG...CTTTACAGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp TCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATATGGCATTTAGTTCTTTaGGATATCTCTCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: SISLSQGIVQITLMTPSIWHLVL*DISQGE
Trigger: CTCTCCCTGAGAGATATCCAAAAGAACTAAATGCCA...TATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000514915.5
CDS-3UTR CAA 90 bp TTTCCACTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCCTTAATGAAGGATTCTaGTTCAACATGCTTTCCATG +
Preference number: 5 (lower is better)
Translates to: FPLGHLKRRGDIVSHRQPLNEGF*FNMLSM
Trigger: CATGGAAAGCATGTTGAACAAGAATCCTTCATTAAG...GGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAGTGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp CTTGGACATTTAAAAAGAAGAGGTGATATCGTAAGTCATAGACAGCCCAGAACTCAGGTGGATCCTTTTTaGCATGGCATTAATTATATG +
Preference number: 5 (lower is better)
Translates to: LGHLKRRGDIVSHRQPRTQVDPF*HGINYM
Trigger: CATATAATTAATGCCATGCAAAAAAGGATCCACCTG...AGTTCTGGGCTGTCTATGACTTACGATATCACCTCTTCTTTTTAAATGTCCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS-3UTR CAA 90 bp ATCTATAAGCTTATCTCAGGGTATAGTCCAAATAACACTTATGACTCCAAGCATCCGAGATCTCAATTCTaGCATTCGTTTGCTATTTTC +
Preference number: 5 (lower is better)
Translates to: IYKLISGYSPNNTYDSKHPRSQF*HSFAIF
Trigger: GAAAATAGCAAACGAATGCAAGAATTGAGATCTCGG...ATGCTTGGAGTCATAAGTGTTATTTGGACTATACCCTGAGATAAGCTTATAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000514915.5
CDS CCA 72 bp CCCACCGAGCGCCAGACACCGCGGGCCACGGCTGTTTaGAACCGTGGCCAGGGAGACGGCGCGGGGCATACT +
Preference number: 6 (lower is better)
Translates to: PTERQTPRATAV*NRGQGDGAGHT
Trigger: AGTATGCCCCGCGCCGTCTCCCTGGCCACGGTTCCAAACAGCCGTGGCCCGCGGTGTCTGGCGCTCGGTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510769.5
CDS CAA 72 bp ACCCACCGAGCGCCAGACACCGCGGGCCACGGCTGTTaGGAACCGTGGCCAGGGAGACGGCGCGGGGCATAC +
Preference number: 6 (lower is better)
Translates to: THRAPDTAGHGC*EPWPGRRRGAY
Trigger: GTATGCCCCGCGCCGTCTCCCTGGCCACGGTTCCAAACAGCCGTGGCCCGCGGTGTCTGGCGCTCGGTGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510769.5
CDS GCA 72 bp TCCTTTCCCTGTCGTGGTCGGAGCGGCGCCCGGGGCTaGCCAAGTCTTGCGGGTAATCGGGCAGGCCTCAAA +
Preference number: 6 (lower is better)
Translates to: SFPCRGRSGARG*PSLAGNRAGLK
Trigger: TTTGAGGCCTGCCCGATTACCCGCAAGACTTGGGCAGCCCCGGGCGCCGCTCCGACCACGACAGGGAAAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383366.9
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000511262.5
ENST00000514915.5
CDS GCA 72 bp ACCTTTCCCTGTCGTGGTCGGAGCGGCGCCCGGGGCTaGCCAAGTCTTGCGGGTAATCGGGCAGGCCTCAAA +
Preference number: 6 (lower is better)
Translates to: TFPCRGRSGARG*PSLAGNRAGLK
Trigger: TTTGAGGCCTGCCCGATTACCCGCAAGACTTGGGCAGCCCCGGGCGCCGCTCCGACCACGACAGGGAAAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506695.5
ENST00000513550.1
CDS CCA 72 bp CCCAAGGAGGACAGTTCGCTTTACCTTTCCCTGTCGTaGTCGGAGCGGCGCCCGGGGCTGCCCAAGTCTTGC +
Preference number: 6 (lower is better)
Translates to: PKEDSSLYLSLS*SERRPGLPKSC
Trigger: GCAAGACTTGGGCAGCCCCGGGCGCCGCTCCGACCACGACAGGGAAAGGTAAAGCGAACTGTCCTCCTTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506695.5
ENST00000507967.1
ENST00000513550.1
CDS TCA 72 bp GGCGTCCTAGAGATTCGGAACCCAGCCCGGGCAGCTTaGAACCATTACCTTCCCCCTCGCAGGGGAGCCTGG +
Preference number: 6 (lower is better)
Translates to: GVLEIRNPARAA*NHYLPPRRGAW
Trigger: CCAGGCTCCCCTGCGAGGGGGAAGGTAATGGTTTCAAGCTGCCCGGGCTGGGTTCCGAATCTCTAGGACGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506695.5
ENST00000507967.1
ENST00000513550.1
CDS CCA 72 bp GGTAAGATGTCCAGGAAAGCGAGGAGATCGCAGCCATaGCGTCCTAGAGATTCGGAACCCAGCCCGGGCAGC +
Preference number: 6 (lower is better)
Translates to: GKMSRKARRSQP*RPRDSEPSPGS
Trigger: GCTGCCCGGGCTGGGTTCCGAATCTCTAGGACGCCATGGCTGCGATCTCCTCGCTTTCCTGGACATCTTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506695.5
ENST00000507967.1
ENST00000513550.1
CDS GCA 72 bp TATCGTCCAGATCTCGGCCCTACTCCTAGATGGAGCTaGCCAGGAAAATCAGAGGGCCCCGATGGGACCCAC +
Preference number: 6 (lower is better)
Translates to: YRPDLGPTPRWS*PGKSEGPDGTH
Trigger: GTGGGTCCCATCGGGGCCCTCTGATTTTCCTGGGCAGCTCCATCTAGGAGTAGGGCCGAGATCTGGACGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426022.6
CDS CCA 72 bp ATTTTAAAGATGAGATTAAGGTTCCTTTCCCTGTCGTaGTCGGAGCGGCGCCCGGGGCTGCCCAAGTCTTGC +
Preference number: 6 (lower is better)
Translates to: ILKMRLRFLSLS*SERRPGLPKSC
Trigger: GCAAGACTTGGGCAGCCCCGGGCGCCGCTCCGACCACGACAGGGAAAGGAACCTTAATCTCATCTTTAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383366.9
ENST00000511262.5
CDS CAA 72 bp CTTGCATGGAACTTGACAATGGCTGGGTGGTCCAGCTaGGAGAGGAGTTGGGCTTCCAAATTGGCCTGTACA +
Preference number: 6 (lower is better)
Translates to: LAWNLTMAGWSS*ERSWASKLACT
Trigger: TGTACAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAGCCATTGTCAAGTTCCATGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356918.8
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000508196.5
ENST00000510688.5
ENST00000510769.5
ENST00000511262.5
ENST00000514915.5
ENST00000602792.1
CDS CAA 90 bp AGCCCACTAGCCCACTCACCAGATGTCCGACTTTGTGTCATAGCCTaGGTGTTTCAGAGCCTCAGGACTCATATAATGGGGAGTTCCAGT +
Preference number: 6 (lower is better)
Translates to: SPLAHSPDVRLCVIA*VFQSLRTHIMGSSS
Trigger: ACTGGAACTCCCCATTATATGAGTCCTGAGGCTCTGAAACACCAAGGCTATGACACAAAGTCGGACATCTGGTGAGTGGGCTAGTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506695.5
CDS GCA 72 bp CACGCTCCCCCTCGAGGTTTGAGTGAACTTGGGCACTaGGAACACATCTTCTTTATTTCTGCATCCCCAATC +
Preference number: 6 (lower is better)
Translates to: HAPPRGLSELGH*EHIFFISASPI
Trigger: GATTGGGGATGCAGAAATAAAGAAGATGTGTTCGCAGTGCCCAAGTTCACTCAAACCTCGAGGGGGAGCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506695.5
CDS CCA 72 bp TTGCTCCACAAAACTTGCATGGAACTTGACAATGGCTaGGTGGTCCAGCTTGGAGAGGAGTTGGGCTTCCAA +
Preference number: 6 (lower is better)
Translates to: LLHKTCMELDNG*VVQLGEELGFQ
Trigger: TTGGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAGCCATTGTCAAGTTCCATGCAAGTTTTGTGGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356918.8
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000508196.5
ENST00000510688.5
ENST00000510769.5
ENST00000511262.5
ENST00000514915.5
ENST00000602792.1
CDS CAA 72 bp CTTGACAATGGCTGGGTGGTCCAGCTTGGAGAGGAGTaGGGCTTCCAAATTGGCCTGTACAGTTTCATTTGG +
Preference number: 6 (lower is better)
Translates to: LDNGWVVQLGEE*GFQIGLYSFIW
Trigger: CCAAATGAAACTGTACAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAGCCATTGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356918.8
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000508196.5
ENST00000510688.5
ENST00000510769.5
ENST00000511262.5
ENST00000514915.5
ENST00000602792.1
CDS CCA 72 bp TTGACAATGGCTGGGTGGTCCAGCTTGGAGAGGAGTTaGGCTTCCAAATTGGCCTGTACAGTTTCATTTGGA +
Preference number: 6 (lower is better)
Translates to: LTMAGWSSLERS*ASKLACTVSFG
Trigger: TCCAAATGAAACTGTACAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAGCCATTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356918.8
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000508196.5
ENST00000510688.5
ENST00000510769.5
ENST00000511262.5
ENST00000514915.5
ENST00000602792.1
CDS TCA 72 bp AGGAAAATCAGAGGGCCCCGATGGGACCCACCACTCTaGAAACAATGCTTAGTTCCTTCAATCAGCAGCAAT +
Preference number: 6 (lower is better)
Translates to: RKIRGPRWDPPL*KQCLVPSISSN
Trigger: ATTGCTGCTGATTGAAGGAACTAAGCATTGTTTTCAGAGTGGTGGGTCCCATCGGGGCCCTCTGATTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426022.6
CDS TCA 72 bp TTTTGGCAAAGCAGGTTAACGTTTATTGAGGGGCACTaGGACTGGAGTACATCCGGAGGTAAGATGTCCAGG +
Preference number: 6 (lower is better)
Translates to: FWQSRLTFIEGH*DWSTSGGKMSR
Trigger: CCTGGACATCTTACCTCCGGATGTACTCCAGTCTCAGTGCCCCTCAATAAACGTTAACCTGCTTTGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506695.5
ENST00000507967.1
ENST00000513550.1
CDS TCA 72 bp GTTCACTTGACAACACGCTCCCCCTCGAGGTTTGAGTaGACTTGGGCACTGCGAACACATCTTCTTTATTTC +
Preference number: 6 (lower is better)
Translates to: VHLTTRSPSRFE*TWALRTHLLYF
Trigger: GAAATAAAGAAGATGTGTTCGCAGTGCCCAAGTTCACTCAAACCTCGAGGGGGAGCGTGTTGTCAAGTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506695.5
CDS TCA 72 bp ATCTGTTCACTTGACAACACGCTCCCCCTCGAGGTTTaGGTGAACTTGGGCACTGCGAACACATCTTCTTTA +
Preference number: 6 (lower is better)
Translates to: ICSLDNTLPLEV*VNLGTANTSSL
Trigger: TAAAGAAGATGTGTTCGCAGTGCCCAAGTTCACTCAAACCTCGAGGGGGAGCGTGTTGTCAAGTGAACAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506695.5
CDS TCA 72 bp CTCGGCCAATTCCTCTCCTCGTTTGGCTTTCTTGTCTaGAACCAGATAGACAGTTCCAAAACTTCCACTGCC +
Preference number: 6 (lower is better)
Translates to: LGQFLSSFGFLV*NQIDSSKTSTA
Trigger: GGCAGTGGAAGTTTTGGAACTGTCTATCTGGTTTCAGACAAGAAAGCCAAACGAGGAGAGGAATTGGCCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510474.5
CDS CCA 72 bp CCTTGTGCAAACTACCCGTTCTCGGTGAAACAGATCTaGCTGGGGGCAAAAGACAACGGAAGGAGTATTTAT +
Preference number: 6 (lower is better)
Translates to: PCANYPFSVKQI*LGAKDNGRSIY
Trigger: ATAAATACTCCTTCCGTTGTCTTTTGCCCCCAGCCAGATCTGTTTCACCGAGAACGGGTAGTTTGCACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506695.5
CDS CAA 90 bp TCCACAAAACTTGCATGGAACTTGACAATGGCTGGGTGGTCCAGCTaGGAGAGGAGTTGGGCTTCCAAATTGGCCTGTACAGTTTCATTT +
Preference number: 6 (lower is better)
Translates to: STKLAWNLTMAGWSS*ERSWASKLACTVSF
Trigger: AAATGAAACTGTACAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCTGGACCACCCAGCCATTGTCAAGTTCCATGCAAGTTTTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356918.8
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000508196.5
ENST00000510688.5
ENST00000510769.5
ENST00000511262.5
ENST00000514915.5
ENST00000602792.1
CDS CCA 72 bp GGTGGTCCAGCTTGGAGAGGAGTTGGGCTTCCAAATTaGCCTGTACAGTTTCATTTGGATTTAGTTCTCCAA +
Preference number: 6 (lower is better)
Translates to: GGPAWRGVGLPN*PVQFHLDLVLQ
Trigger: TTGGAGAACTAAATCCAAATGAAACTGTACAGGCCAATTTGGAAGCCCAACTCCTCTCCAAGCTGGACCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356918.8
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000508196.5
ENST00000510688.5
ENST00000510769.5
ENST00000511262.5
ENST00000514915.5
ENST00000602792.1
CDS CCA 72 bp GTCAGCTGTGAGTTGCATGGTATCCAAGGTCAGATGTaGCATCCTCTACAATTGATTCAAGTTCGTGGAGGT +
Preference number: 6 (lower is better)
Translates to: VSCELHGIQGQM*HPLQLIQVRGG
Trigger: ACCTCCACGAACTTGAATCAATTGTAGAGGATGCCACATCTGACCTTGGATACCATGCAACTCACAGCTGAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356918.8
ENST00000511262.5
CDS GCA 72 bp AAGCTAGATGGGAACTTGGAGAAAGTTACTACCTTGTaGAAACTACCCGTTCTCGGTGAAACAGATCTGGCT +
Preference number: 6 (lower is better)
Translates to: KLDGNLEKVTTL*KLPVLGETDLA
Trigger: AGCCAGATCTGTTTCACCGAGAACGGGTAGTTTGCACAAGGTAGTAACTTTCTCCAAGTTCCCATCTAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506695.5
CDS CCA 72 bp ATGGCTGTTGATCCACTCACACACTTAGCTGCCTCTTaGAATTTCAGCATTGCTCCAAACAAGAGAGAACTG +
Preference number: 6 (lower is better)
Translates to: MAVDPLTHLAAS*NFSIAPNKREL
Trigger: CAGTTCTCTCTTGTTTGGAGCAATGCTGAAATTCCAAGAGGCAGCTAAGTGTGTGAGTGGATCAACAGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356918.8
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000507967.1
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000511262.5
ENST00000513550.1
ENST00000514915.5
CDS CCA 72 bp TTATCGTCCAGATCTCGGCCAATTCCTCTCCTCGTTTaGCTTTCTTGTCTGAAACCAGATAGACAGTTCCAA +
Preference number: 6 (lower is better)
Translates to: LSSRSRPIPLLV*LSCLKPDRQFQ
Trigger: TTGGAACTGTCTATCTGGTTTCAGACAAGAAAGCCAAACGAGGAGAGGAATTGGCCGAGATCTGGACGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510474.5
CDS TCA 72 bp AATTCATCCAGTGTTGGTCAGTTCAGACTTTCCAGCTaGAAAGGGTCCTTCAGGTCACTCAGTAATTCTCCT +
Preference number: 6 (lower is better)
Translates to: NSSSVGQFRLSS*KGSFRSLSNSP
Trigger: AGGAGAATTACTGAGTGACCTGAAGGACCCTTTTCAGCTGGAAAGTCTGAACTGACCAACACTGGATGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000507967.1
ENST00000511262.5
CDS CAA 72 bp TCCAGTCTCCTAAGAAATGGTCAAATTCATCCAGTGTaGGTCAGTTCAGACTTTCCAGCTGAAAAGGGTCCT +
Preference number: 6 (lower is better)
Translates to: SSLLRNGQIHPV*VSSDFPAEKGP
Trigger: AGGACCCTTTTCAGCTGGAAAGTCTGAACTGACCAACACTGGATGAATTTGACCATTTCTTAGGAGACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000507967.1
ENST00000511262.5
CDS CAA 72 bp AGAAAGCTAGATGGGAACTTGGAGAAAGTTACTACCTaGTGCAAACTACCCGTTCTCGGTGAAACAGATCTG +
Preference number: 6 (lower is better)
Translates to: RKLDGNLEKVTT*CKLPVLGETDL
Trigger: CAGATCTGTTTCACCGAGAACGGGTAGTTTGCACAAGGTAGTAACTTTCTCCAAGTTCCCATCTAGCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506695.5
CDS TCA 72 bp CTTCCTTCCCCAAGTACACCCTATATGATGATTAGATaGTCCAGTAGCTGTTATGAGGAGAGGTACAGTTCT +
Preference number: 6 (lower is better)
Translates to: LPSPSTPYMMIR*SSSCYEERYSS
Trigger: AGAACTGTACCTCTCCTCATAACAGCTACTGGATCATCTAATCATCATATAGGGTGTACTTGGGGAAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426022.6
CDS GCA 72 bp CCCTCACAGTACTCCGTGATAATGCAGAAATTATCTTaGTCCACAAAACTTGCATGGAACTTGACAATGGCT +
Preference number: 6 (lower is better)
Translates to: PSQYSVIMQKLS*STKLAWNLTMA
Trigger: AGCCATTGTCAAGTTCCATGCAAGTTTTGTGGAGCAAGATAATTTCTGCATTATCACGGAGTACTGTGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356918.8
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000508196.5
ENST00000510688.5
ENST00000510769.5
ENST00000511262.5
ENST00000514915.5
ENST00000602792.1
CDS CCA 72 bp TTAGATTACAGTCTCCATGGTATCCAAGGTCAGATGTaGCATCCTCTACAATTGATTCAAGTTCGTGGAGGT +
Preference number: 6 (lower is better)
Translates to: LDYSLHGIQGQM*HPLQLIQVRGG
Trigger: ACCTCCACGAACTTGAATCAATTGTAGAGGATGCCACATCTGACCTTGGATACCATGGAGACTGTAATCTAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507910.5
CDS CAA 90 bp TTCCAAAACTTCCACTGCCAAGTTTTTGTTGAAGCACGTATCTTCTaGCAATCAAGGTCTTTGGATAAGTGGAAATGGCTGTTGATCCAC +
Preference number: 6 (lower is better)
Translates to: FQNFHCQVFVEARIF*QSRSLDKWKWLLIH
Trigger: GTGGATCAACAGCCATTTCCACTTATCCAAAGACCTTGATTGCAAGAAGATACGTGCTTCAACAAAAACTTGGCAGTGGAAGTTTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000356918.8
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000507967.1
ENST00000508196.5
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000511262.5
ENST00000514915.5
CDS TCA 72 bp GGGCAAAAGACAACGGAAGGAGTATTTATCACAAGTTaGAAACCAGTAGTTATCTTCCCAGGTAATAAGAGG +
Preference number: 6 (lower is better)
Translates to: GQKTTEGVFITS*KPVVIFPGNKR
Trigger: CCTCTTATTACCTGGGAAGATAACTACTGGTTTTCAACTTGTGATAAATACTCCTTCCGTTGTCTTTTGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506695.5
CDS GCA 72 bp ACTCACACACTTAGCTGCCTCTTGGAATTTCAGCATTaGTCCAAACAAGAGAGAACTGGTTCATTCATTTAT +
Preference number: 6 (lower is better)
Translates to: THTLSCLLEFQH*SKQERTGSFIY
Trigger: ATAAATGAATGAACCAGTTCTCTCTTGTTTGGAGCAATGCTGAAATTCCAAGAGGCAGCTAAGTGTGTGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356918.8
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000507967.1
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000511262.5
ENST00000513550.1
ENST00000514915.5
CDS CAA 72 bp ATAGACAGTTCCAAAACTTCCACTGCCAAGTTTTTGTaGAAGCACGTATCTTCTTGCAATCAAGGTCTTTGG +
Preference number: 6 (lower is better)
Translates to: IDSSKTSTAKFL*KHVSSCNQGLW
Trigger: CCAAAGACCTTGATTGCAAGAAGATACGTGCTTCAACAAAAACTTGGCAGTGGAAGTTTTGGAACTGTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000356918.8
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000507967.1
ENST00000508196.5
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000511262.5
ENST00000514915.5
CDS CAA 72 bp CAGATAGACAGTTCCAAAACTTCCACTGCCAAGTTTTaGTTGAAGCACGTATCTTCTTGCAATCAAGGTCTT +
Preference number: 6 (lower is better)
Translates to: QIDSSKTSTAKF*LKHVSSCNQGL
Trigger: AAGACCTTGATTGCAAGAAGATACGTGCTTCAACAAAAACTTGGCAGTGGAAGTTTTGGAACTGTCTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000356918.8
ENST00000383366.9
ENST00000506695.5
ENST00000507910.5
ENST00000507967.1
ENST00000508196.5
ENST00000510474.5
ENST00000510688.5
ENST00000510769.5
ENST00000511262.5
ENST00000514915.5