RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NEK10 (Homo sapiens)

Ensembl gene IDs: ENSG00000163491

Ensembl transcript IDs: ENST00000295720.10, ENST00000341435.9, ENST00000383770.4, ENST00000383771.8, ENST00000424275.1, ENST00000429845.6, ENST00000435584.5, ENST00000435750.1, ENST00000460447.1, ENST00000474938.1, ENST00000491627.1, ENST00000498182.5, ENST00000574215.5

Found 440 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATTGGCTCACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTaGTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGC +
Preference number: 1 (lower is better)
Translates to: IGSRFCRLYRNHDGI*FLGGIRKLPMIAEG
Trigger: GCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGAGCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
3UTR TCA 90 bp GAGAGGTTTAATTGGCTCACGGTTCTGCAGGCTGTACAGGAACCATaGTGGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGAT +
Preference number: 1 (lower is better)
Translates to: ERFNWLTVLQAVQEP*WHLLLGRHQEASND
Trigger: ATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGAGCCAATTAAACCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
3UTR-3UTR CCA 90 bp GTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCAGCACAGGAGGCCCCATGGCATCTTaGTCTTTTCCACACCCTCTA +
Preference number: 2 (lower is better)
Translates to: VLAMKPSSTAAVIYSSTGGPMAS*SFPHPL
Trigger: TAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCC...TCCTGTGCTGGAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
3UTR CAA 90 bp TCACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTaGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAGGA +
Preference number: 2 (lower is better)
Translates to: SRFCRLYRNHDGICF*GGIRKLPMIAEGKG
Trigger: TCCTTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
3UTR-3UTR CCA 90 bp CAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGCCGCAGCACCCAATCCTTaGGCATCTTGCAATAGCGGC +
Preference number: 2 (lower is better)
Translates to: QHTGSSDILYIMCSGNEAAAPNP*ASCNSG
Trigger: GCCGCTATTGCAAGATGCCCAAGGATTGGGTGCTGC...GGCTTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
3UTR-3UTR CCA 90 bp CTGTCTACACTGTATCACAGTTCAAGACCACTAGCACCCAAGTGGTTAAGCGAGGGCCCCATGGCATCTTaGTCTTTTCCACACCCTCTA +
Preference number: 2 (lower is better)
Translates to: LSTLYHSSRPLAPKWLSEGPMAS*SFPHPL
Trigger: TAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCC...CTCGCTTAACCACTTGGGTGCTAGTGGTCTTGAACTGTGATACAGTGTAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295720.10
3UTR-3UTR TCA 90 bp ATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTAATGTGTTCTGGCAATaGAGCCCTCAAGTACCGCAG +
Preference number: 2 (lower is better)
Translates to: MNFAAFSPSSTLVALTSCNVFWQ*SPQVPQ
Trigger: CTGCGGTACTTGAGGGCTTCATTGCCAGAACACATT...ACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
3UTR-3UTR CCA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCCCCATGGCATCTTaGTCTTTTCCACACCCTCTA +
Preference number: 2 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSGPMAS*SFPHPL
Trigger: TAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCC...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
3UTR-3UTR TCA 90 bp ATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTTCTTGCAATAGCGGCTaGAGTCCAGAACTTGAACTT +
Preference number: 2 (lower is better)
Translates to: MNFAAFSPSSTLVALTSCSCNSG*SPELEL
Trigger: AAGTTCAAGTTCTGGACTTCAGCCGCTATTGCAAGA...ACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
3UTR-3UTR TCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATTCTTGCAATAGCGGCTaGAGTCCAGAACTTGAACTT +
Preference number: 2 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYSCNSG*SPELEL
Trigger: AAGTTCAAGTTCTGGACTTCAGCCGCTATTGCAAGA...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
3UTR-3UTR TCA 90 bp ATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTGAACTTGAACTTCACTaGGAAAATCAAGTCCACTCA +
Preference number: 2 (lower is better)
Translates to: MNFAAFSPSSTLVALTSCELELH*ENQVHS
Trigger: TGAGTGGACTTGATTTTCTCAGTGAAGTTCAAGTTC...ACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
3UTR-3UTR TCA 90 bp CAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGCCGAACTTGAACTTCACTaGGAAAATCAAGTCCACTCA +
Preference number: 2 (lower is better)
Translates to: QHTGSSDILYIMCSGNEAELELH*ENQVHS
Trigger: TGAGTGGACTTGATTTTCTCAGTGAAGTTCAAGTTC...GGCTTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
3UTR-3UTR TCA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTTCTTGCAATAGCGGCTaGAGTCCAGAACTTGAACTT +
Preference number: 2 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSSCNSG*SPELEL
Trigger: AAGTTCAAGTTCTGGACTTCAGCCGCTATTGCAAGA...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
3UTR-3UTR CCA 90 bp ATTGAAGAGAAGGAGTTTAAGCCCAGTGAGAATCTAGCAGATTTTCATCATAATGCAGCACCCAATCCTTaGGCATCTTGCAATAGCGGC +
Preference number: 2 (lower is better)
Translates to: IEEKEFKPSENLADFHHNAAPNP*ASCNSG
Trigger: GCCGCTATTGCAAGATGCCCAAGGATTGGGTGCTGC...ATTATGATGAAAATCTGCTAGATTCTCACTGGGCTTAAACTCCTTCTCTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295720.10
3UTR-3UTR TCA 90 bp CAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGAACTTGAACTTCACTaGGAAAATCAAGTCCACTCA +
Preference number: 2 (lower is better)
Translates to: QQHTGSSDILYIMCSGNEELELH*ENQVHS
Trigger: TGAGTGGACTTGATTTTCTCAGTGAAGTTCAAGTTC...TTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
3UTR-3UTR TCA 90 bp CAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAACTGAAGTCCAGAACTTaGACTTCACTGAGAAAATCA +
Preference number: 2 (lower is better)
Translates to: QQHTGSSDILYIMCSGNELKSRT*TSLRKS
Trigger: TGATTTTCTCAGTGAAGTTCAAGTTCTGGACTTCAG...TTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
3UTR-3UTR TCA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTCTGAAGTCCAGAACTTaGACTTCACTGAGAAAATCA +
Preference number: 2 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSLKSRT*TSLRKS
Trigger: TGATTTTCTCAGTGAAGTTCAAGTTCTGGACTTCAG...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
3UTR-3UTR TCA 90 bp ATTGAAGAGAAGGAGTTTAAGCCCAGTGAGAATCTAGCAGATTTTCATCATAATAATGTGTTCTGGCAATaGAGCCCTCAAGTACCGCAG +
Preference number: 2 (lower is better)
Translates to: IEEKEFKPSENLADFHHNNVFWQ*SPQVPQ
Trigger: CTGCGGTACTTGAGGGCTTCATTGCCAGAACACATT...ATTATGATGAAAATCTGCTAGATTCTCACTGGGCTTAAACTCCTTCTCTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295720.10
3UTR-3UTR TCA 90 bp ATTGAAGAGAAGGAGTTTAAGCCCAGTGAGAATCTAGCAGATTTTCATCATAATTCCCGGCATAAAGGATaGTACACAGTTTGGCATTCT +
Preference number: 2 (lower is better)
Translates to: IEEKEFKPSENLADFHHNSRHKG*YTVWHS
Trigger: AGAATGCCAAACTGTGTATCATCCTTTATGCCGGGA...ATTATGATGAAAATCTGCTAGATTCTCACTGGGCTTAAACTCCTTCTCTTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295720.10
3UTR TCA 72 bp AATTGGCTCACGGTTCTGCAGGCTGTACAGGAACCATaGTGGCATTTGCTTCTTGGGAGGCATCAGGAAGCT +
Preference number: 3 (lower is better)
Translates to: NWLTVLQAVQEP*WHLLLGRHQEA
Trigger: AGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGAGCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
3UTR-3UTR CAA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCAGCTGAAGTCCAGAACTaGAACTTCACTGAGAAAATC +
Preference number: 3 (lower is better)
Translates to: RSPAGPMASWSFPHPLAAAEVQN*NFTEKI
Trigger: GATTTTCTCAGTGAAGTTCAAGTTCTGGACTTCAGC...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
3UTR GCA 72 bp CGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTaGTTCTTGGGAGGCATCAGGAAGCTTCCAATGATA +
Preference number: 3 (lower is better)
Translates to: RFCRLYRNHDGI*FLGGIRKLPMI
Trigger: TATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
3UTR-3UTR CAA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCTGAAGTCCAGAACTaGAACTTCACTGAGAAAATC +
Preference number: 3 (lower is better)
Translates to: ERSPAGPMASWSFPHPLAAEVQN*NFTEKI
Trigger: GATTTTCTCAGTGAAGTTCAAGTTCTGGACTTCAGC...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
3UTR-3UTR CAA 90 bp CAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAAGGCCCCATGGCATCTaGGTCTTTTCCACACCCTCT +
Preference number: 3 (lower is better)
Translates to: QQHTGSSDILYIMCSGNERPHGI*VFSTPS
Trigger: AGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCT...TTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
3UTR-3UTR CAA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATGCTGAAGTCCAGAACTaGAACTTCACTGAGAAAATC +
Preference number: 3 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYAEVQN*NFTEKI
Trigger: GATTTTCTCAGTGAAGTTCAAGTTCTGGACTTCAGC...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
3UTR GCA 72 bp TTTAGAAAGAAGAGAGGTTTAATTGGCTCACGGTTCTaGAGGCTGTACAGGAACCATGATGGCATTTGCTTC +
Preference number: 3 (lower is better)
Translates to: FRKKRGLIGSRF*RLYRNHDGICF
Trigger: GAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGAGCCAATTAAACCTCTCTTCTTTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
3UTR-3UTR CAA 90 bp AGAAAATTATTCTTCTCTCAGAAAGTAACGAGTAGGTCAGCCTTACTGTTAAGAAGACATCATATAAGCTaGCAGCTTACAAGGTACATG +
Preference number: 3 (lower is better)
Translates to: RKLFFSQKVTSRSALLLRRHHIS*QLTRYM
Trigger: CATGTACCTTGTAAGCTGCAAGCTTATATGATGTCT...TCTTAACAGTAAGGCTGACCTACTCGTTACTTTCTGAGAGAAGAATAATTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR GCA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCAGCTGTCACCTGCTGCTaGAGACCGGGGGTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: RSPAGPMASWSFPHPLAAAVTCC*RPGVPS
Trigger: GGACGGGACCCCCGGTCTGCAGCAGCAGGTGACAGC...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR GCA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCAGCTGCTGTCACCTGCTaGTGCAGACCGGGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: RSPAGPMASWSFPHPLAAAAVTC*CRPGVP
Trigger: CGGGACCCCCGGTCTGCAGCAGCAGGTGACAGCAGC...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR GCA 90 bp TGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCCCTGCTGCTGTCACCTaGTGCTGCAGACCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: CRPHGILVFSTPSSSTQSPAAVT*CCRPGV
Trigger: GACCCCCGGTCTGCAGCAGCAGGTGACAGCAGCAGG...GGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCATGTGTCCACCCGCCCTaGTGGCGGGCTCAGACTTCG +
Preference number: 4 (lower is better)
Translates to: RSPAGPMASWSFPHPLAACVHPP*WRAQTS
Trigger: CGAAGTCTGAGCCCGCCATCAGGGCGGGTGGACACA...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR GCA 90 bp TCACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCGCTGTCACCTGCTGCTaGAGACCGGGGGTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: SRFCRLYRNHDGICFLGGAVTCC*RPGVPS
Trigger: GGACGGGACCCCCGGTCTGCAGCAGCAGGTGACAGC...GCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR GCA 90 bp TCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATCAGGAGCTGCTGTCACCTGCTaGTGCAGACCGGGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: SAGCTGTMMAFASWEASGAAVTC*CRPGVP
Trigger: CGGGACCCCCGGTCTGCAGCAGCAGGTGACAGCAGC...TCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR GCA 90 bp TTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAGGAGGAGCCCCTGCTGCTGTCACCTaGTGCTGCAGACCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: FLGGIRKLPMIAEGKGGAPAAVT*CCRPGV
Trigger: GACCCCCGGTCTGCAGCAGCAGGTGACAGCAGCAGG...GGCTCCTCCTTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp CGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATCCAGAGTGGAGCAGACTaGGGAGGACCGGTATCCCCT +
Preference number: 4 (lower is better)
Translates to: RFCRLYRNHDGICFLGGIQSGAD*GGPVSP
Trigger: AGGGGATACCGGTCCTCCTCAGTCTGCTCCACTCTG...GATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR GCA 90 bp GGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAGGAGGAGCCAGCACGACACCGCGGCCAGCTaGACCGTTGGTTTTCCAATC +
Preference number: 4 (lower is better)
Translates to: GRHQEASNDSRRQRRSQHDTAAS*TVGFPI
Trigger: GATTGGAAAACCAACGGTGCAGCTGGCCGCGGTGTC...GTGCTGGCTCCTCCTTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CCA 90 bp TGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCCCAGCACGTTTTATGTaGCCAGAGCAGGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: CRPHGILVFSTPSSSTQSPARFM*PEQEQE
Trigger: CTCCTGCTCCTGCTCTGGCCACATAAAACGTGCTGG...GGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295720.10
ENST00000383771.8
CDS-3UTR CCA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCATGGGCCCTGAGCATGTaGGGTGGCACTTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: RSPAGPMASWSFPHPLAAWALSM*GGTFRS
Trigger: GCTTCTGAAAGTGCCACCCCACATGCTCAGGGCCCA...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp TGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTGGCTGCTCCACTGCTaGTGCTACTCAAACTTGCCT +
Preference number: 4 (lower is better)
Translates to: CRPHGILVFSTPSSSTQSWLLHC*CYSNLP
Trigger: AGGCAAGTTTGAGTAGCAGCAGCAGTGGAGCAGCCA...GGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp TGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCCTGCAGCATTTGCACTaGACAGGCTTCCAATGGAGG +
Preference number: 4 (lower is better)
Translates to: CRPHGILVFSTPSSSTQSLQHLH*TGFQWR
Trigger: CCTCCATTGGAAGCCTGTCCAGTGCAAATGCTGCAG...GGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp GGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAGGAGGAGCCAGCACTTCATTGGCCATTTCTaGCTTTTCGCGCGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GRHQEASNDSRRQRRSQHFIGHF*LFAREG
Trigger: TCCCTCCCGCGCGAAAAGTCAGAAATGGCCAATGAA...GTGCTGGCTCCTCCTTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp ATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAGGATGTGTCCACCCGCCCTaGTGGCGGGCTCAGACTTCG +
Preference number: 4 (lower is better)
Translates to: ICFLGGIRKLPMIAEGKGCVHPP*WRAQTS
Trigger: CGAAGTCTGAGCCCGCCATCAGGGCGGGTGGACACA...TCCTTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp TCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATCAGAGTGGAGCAGACTaGGGAGGACCGGTATCCCCT +
Preference number: 4 (lower is better)
Translates to: SWSFPHPLAAPNPWASCNQSGAD*GGPVSP
Trigger: AGGGGATACCGGTCCTCCTCAGTCTGCTCCACTCTG...ATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR GCA 90 bp TGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCCTTGCCACAAGAATGTaGCCATCTGTGGCCCATGAT +
Preference number: 4 (lower is better)
Translates to: CRPHGILVFSTPSSSTQSLATRM*PSVAHD
Trigger: ATCATGGGCCACAGATGGGCACATTCTTGTGGCAAG...GGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295720.10
ENST00000429845.6
CDS-3UTR CCA 90 bp CATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCGTTCACTTTTCAGGCTaGCTGCTCCACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HGILVFSTPSSSTQSLGIVHFSG*LLHCCC
Trigger: GCAGCAGCAGTGGAGCAGCCAGCCTGAAAAGTGAAC...GATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCATCAGAGGGCTTGAACTaGAGCTGCTGGAGTTATCCG +
Preference number: 4 (lower is better)
Translates to: RSPAGPMASWSFPHPLAASEGLN*SCWSYP
Trigger: CGGATAACTCCAGCAGCTCCAGTTCAAGCCCTCTGA...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCAGCACCCAATCCTTaGGCATCTTGCAATAGCGGC +
Preference number: 4 (lower is better)
Translates to: ERSPAGPMASWSFPHPLAAAPNP*ASCNSG
Trigger: GCCGCTATTGCAAGATGCCCAAGGATTGGGTGCTGC...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp TCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATACAGCCAGCTCATGGTaGCATGTGACGGTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: SWSFPHPLAAPNPWASCNTASSW*HVTVFR
Trigger: CCGGAACACCGTCACATGTCACCATGAGCTGGCTGT...ATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCATTCTTTCAGAGGGCTTaGACTGGAGCTGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: RSPAGPMASWSFPHPLAAFFQRA*TGAAGV
Trigger: AACTCCAGCAGCTCCAGTTCAAGCCCTCTGAAAGAA...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACATCTTTTGGTTGGGTaGTTCTTGGTCCCCCATGGA +
Preference number: 4 (lower is better)
Translates to: RSPAGPMASWSFPHPLAAHLLVG*FLVPHG
Trigger: TCCATGGGGGACCAAGAATCACCCAACCAAAAGATG...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp CATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCAAGGATGCAGCCTACTaGCCAGACATCAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: HGILVFSTPSSSTQSLGIKDAAY*PDISLL
Trigger: GAGAAGGCTGATGTCTGGGCAGTAGGCTGCATCCTT...GATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp GTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCAGCACAGGAGGCTGGCTGCTCCACTaGTGCTGCTACTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: VLAMKPSSTAAVIYSSTGGWLLH*CCYSNL
Trigger: CAAGTTTGAGTAGCAGCAGCAGTGGAGCAGCCAGCC...TCCTGTGCTGGAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAACTTTTCAGGCTGGCTaGTCCACTGCTGCTGCTACT +
Preference number: 4 (lower is better)
Translates to: ERSPAGPMASWSFPHPLATFQAG*STAAAT
Trigger: AGTAGCAGCAGCAGTGGAGCAGCCAGCCTGAAAAGT...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp TCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCAGCACAGGACCACTTTTCAGGCTGGCTaGTCCACTGCTGCTGCTACT +
Preference number: 4 (lower is better)
Translates to: SGNEALKYRSCHILQHRTTFQAG*STAAAT
Trigger: AGTAGCAGCAGCAGTGGAGCAGCCAGCCTGAAAAGT...GGTCCTGTGCTGGAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp GGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCTGCTGGATTCGGCCTaGAGCATTTGCACTGGACAG +
Preference number: 4 (lower is better)
Translates to: GCTGTMMAFASWEASGSFLLDSA*SICTGQ
Trigger: CTGTCCAGTGCAAATGCTGCAGGCCGAATCCAGCAG...GAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CCA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCAGATACCTTCTGGGACTaGTTCATATACCGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RSPAGPMASWSFPHPLAADTFWD*FIYRLH
Trigger: GTGGAGGCGGTATATGAACCAGTCCCAGAAGGTATC...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCATCAGAGGGCTTGAACTaGAGCTGCTGGAGTTATCCG +
Preference number: 4 (lower is better)
Translates to: ERSPAGPMASWSFPHPLASEGLN*SCWSYP
Trigger: CGGATAACTCCAGCAGCTCCAGTTCAAGCCCTCTGA...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGGCCCCATGGCATCTTaGTCTTTTCCACACCCTCTA +
Preference number: 4 (lower is better)
Translates to: ERSPAGPMASWSFPHPLAGPMAS*SFPHPL
Trigger: TAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCC...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp CACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATTCAAGTGGTCAGAGTaGAGCAGACTGAGGAGGACC +
Preference number: 4 (lower is better)
Translates to: HGSAGCTGTMMAFASWEAFKWSE*SRLRRT
Trigger: GGTCCTCCTCAGTCTGCTCCACTCTGACCACTTGAA...TGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CCA 90 bp CATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTCAAGTGGTCAGAGTaGAGCAGACTGAGGAGGACC +
Preference number: 4 (lower is better)
Translates to: HGILVFSTPSSSTQSLGIFKWSE*SRLRRT
Trigger: GGTCCTCCTCAGTCTGCTCCACTCTGACCACTTGAA...GATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAATAGGATCACTGATCTaGCGCACTTTCCTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ERSPAGPMASWSFPHPLAIGSLI*RTFLWD
Trigger: GTCCCAGAGGAAAGTGCGTCAGATCAGTGATCCTAT...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp GGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAGTGGATTCATGCCACTaGCCCCGAGCTCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GICFLGGIRKLPMIAEGKVDSCH*PRALCP
Trigger: TGGACACAGAGCTCGGGGTCAGTGGCATGAATCCAC...TTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR GCA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCATCTGATAAAGGATaGAGCCTACTGCCCAGACAT +
Preference number: 4 (lower is better)
Translates to: RSPAGPMASWSFPHPLAAPSDKG*SLLPRH
Trigger: ATGTCTGGGCAGTAGGCTGCATCCTTTATCAGATGG...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp TCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATAGCGGCCTGCTCCACTGCTGCTaGTACTCAAACTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SFPHPLAAPNPWASCNSGLLHCC*YSNLPS
Trigger: AGAAGGCAAGTTTGAGTAGCAGCAGCAGTGGAGCAG...GCCGCTATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp TGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTACAAGGGTTACTCTaGTGGCTGAAGAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: CRPHGILVFSTPSSSTQSLQGLL*WLKRDF
Trigger: GAAATCCCTCTTCAGCCAGCAGAGTAACCCTTGTAA...GGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp TCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATCAGGACCTTATCATTGTCCCTaGTGCTGTCACCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SAGCTGTMMAFASWEASGPYHCP*CCHLLL
Trigger: CAGCAGCAGGTGACAGCAGCAGGGACAATGATAAGG...TCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR GCA 90 bp GGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCTCGGCCTGCAGCATTTaGACTGGACAGGCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: GCTGTMMAFASWEASGSFSACSI*TGQASN
Trigger: ATTGGAAGCCTGTCCAGTGCAAATGCTGCAGGCCGA...GAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR GCA 90 bp TCACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATTGGCTCACGGTTCTaGAGGCTGTACAGGAACCAT +
Preference number: 4 (lower is better)
Translates to: SRFCRLYRNHDGICFLGGIGSRF*RLYRNH
Trigger: ATGGTTCCTGTACAGCCTGCAGAACCGTGAGCCAAT...GCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CCA 90 bp TGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCAGAGTAGATACCTTCTaGGACTGGTTCATATACCGC +
Preference number: 4 (lower is better)
Translates to: CRPHGILVFSTPSSSTQSRVDTF*DWFIYR
Trigger: GCGGTATATGAACCAGTCCCAGAAGGTATCTACTCT...GGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp TGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGAACTGGAGCTGCTaGAGTTATCCGAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: CRPHGILVFSTPSSSTQSLNWSC*SYPKCP
Trigger: TGGACATTTCGGATAACTCCAGCAGCTCCAGTTCAA...GGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACAAGGGTTACTCTGCTaGCTGAAGAGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: RSPAGPMASWSFPHPLAAQGLLC*LKRDFL
Trigger: CAAGAAATCCCTCTTCAGCCAGCAGAGTAACCCTTG...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp TCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATCAGGACAGAGGAGCTTCAAGTaGTCAGAGTGGAGCAGACTG +
Preference number: 4 (lower is better)
Translates to: SAGCTGTMMAFASWEASGQRSFK*SEWSRL
Trigger: CAGTCTGCTCCACTCTGACCACTTGAAGCTCCTCTG...TCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CCA 90 bp GGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCTGCAGCATTTGCACTaGACAGGCTTCCAATGGAGG +
Preference number: 4 (lower is better)
Translates to: GCTGTMMAFASWEASGSFLQHLH*TGFQWR
Trigger: CCTCCATTGGAAGCCTGTCCAGTGCAAATGCTGCAG...GAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATACAGCCAGCTCATGGTaGCATGTGACGGTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYTASSW*HVTVFR
Trigger: CCGGAACACCGTCACATGTCACCATGAGCTGGCTGT...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp ATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTACAGCCAGCTCATGGTaGCATGTGACGGTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: MNFAAFSPSSTLVALTSCTASSW*HVTVFR
Trigger: CCGGAACACCGTCACATGTCACCATGAGCTGGCTGT...ACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp CATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCCAGGTCTGCGCTTTCTaGAAGTTCACTTTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: HGILVFSTPSSSTQSLGIQVCAF*KFTFQA
Trigger: AGCCTGAAAAGTGAACTTTCAGAAAGCGCAGACCTG...GATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCACAGGTCTGCGCTTTCTaGAAGTTCACTTTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: ERSPAGPMASWSFPHPLAQVCAF*KFTFQA
Trigger: AGCCTGAAAAGTGAACTTTCAGAAAGCGCAGACCTG...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCAGTTGAAGTTATCATCTaGCAGGATTTCGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: RSPAGPMASWSFPHPLAAVEVII*QDFVTG
Trigger: GCCTGTGACGAAATCCTGTCAGATGATAACTTCAAC...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCAGTGGCCCATGATCTTTaGGATTTCGAAGAATCACAG +
Preference number: 4 (lower is better)
Translates to: RSPAGPMASWSFPHPLAAVAHDL*DFEESQ
Trigger: CTGTGATTCTTCGAAATCTCAAAGATCATGGGCCAC...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295720.10
ENST00000429845.6
CDS-3UTR TCA 90 bp TCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATAGCGGCCCCATCTGTGGCCCATaGTCTTTGAGATTTCGAAGA +
Preference number: 4 (lower is better)
Translates to: SFPHPLAAPNPWASCNSGPICGP*SLRFRR
Trigger: TCTTCGAAATCTCAAAGATCATGGGCCACAGATGGG...GCCGCTATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295720.10
ENST00000429845.6
CDS-3UTR TCA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCACACAGCAATTCCTGCTaGTGCTTGCCACAAGAATGT +
Preference number: 4 (lower is better)
Translates to: ERSPAGPMASWSFPHPLAHSNSC*CLPQEC
Trigger: ACATTCTTGTGGCAAGCATCAGCAGGAATTGCTGTG...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295720.10
ENST00000429845.6
CDS-3UTR GCA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAAACCATGATGGCATTTaGTTCTTGGGAGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: ERSPAGPMASWSFPHPLANHDGI*FLGGIR
Trigger: CCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTT...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295720.10
ENST00000383771.8
CDS-3UTR GCA 90 bp TCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATAAGGATGCAGCCTACTaGCCAGACATCAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SWSFPHPLAAPNPWASCNKDAAY*PDISLL
Trigger: GAGAAGGCTGATGTCTGGGCAGTAGGCTGCATCCTT...ATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp TCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATACTTTTCAGGCTGGCTaGTCCACTGCTGCTGCTACT +
Preference number: 4 (lower is better)
Translates to: SWSFPHPLAAPNPWASCNTFQAG*STAAAT
Trigger: AGTAGCAGCAGCAGTGGAGCAGCCAGCCTGAAAAGT...ATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCAGCTCAGACTTCGTCATaGTATTTTGGGCACTATCGA +
Preference number: 4 (lower is better)
Translates to: RSPAGPMASWSFPHPLAAAQTSS*YFGHYR
Trigger: TCGATAGTGCCCAAAATAGCATGACGAAGTCTGAGC...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR GCA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCACCAGAATCCAGACAATaGTCCAGAGGAGCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: ERSPAGPMASWSFPHPLAPESRQ*SRGASS
Trigger: ACTTGAAGCTCCTCTGGAGCATTGTCTGGATTCTGG...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CCA 90 bp GGCTCACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAATGGCATTTGCTTCTTaGGAGGCATCAGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GSRFCRLYRNHDGICFLGMAFAS*EASGSF
Trigger: GAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCAT...TCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CCA 90 bp CTGTCTACACTGTATCACAGTTCAAGACCACTAGCACCCAAGTGGTTAAGCGAGGTTCACTTTTCAGGCTaGCTGCTCCACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSTLYHSSRPLAPKWLSEVHFSG*LLHCCC
Trigger: GCAGCAGCAGTGGAGCAGCCAGCCTGAAAAGTGAAC...CTCGCTTAACCACTTGGGTGCTAGTGGTCTTGAACTGTGATACAGTGTAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295720.10
CDS-3UTR CCA 90 bp CAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGCCTGGGCCCTGAGCATGTaGGGTGGCACTTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: QHTGSSDILYIMCSGNEAWALSM*GGTFRS
Trigger: GCTTCTGAAAGTGCCACCCCACATGCTCAGGGCCCA...GGCTTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp CATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTCTATTTCCTTAATGTaGGCCCTGAGCATGTGGGGT +
Preference number: 4 (lower is better)
Translates to: HGILVFSTPSSSTQSLGISISLM*ALSMWG
Trigger: ACCCCACATGCTCAGGGCCCACATTAAGGAAATAGA...GATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCATCTATTTCCTTAATGTaGGCCCTGAGCATGTGGGGT +
Preference number: 4 (lower is better)
Translates to: ERSPAGPMASWSFPHPLASISLM*ALSMWG
Trigger: ACCCCACATGCTCAGGGCCCACATTAAGGAAATAGA...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp TCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATAGCGGCTGGTTGGGTGATTCTTaGTCCCCCATGGATAGGAAT +
Preference number: 4 (lower is better)
Translates to: SFPHPLAAPNPWASCNSGWLGDS*SPMDRN
Trigger: ATTCCTATCCATGGGGGACCAAGAATCACCCAACCA...GCCGCTATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp TCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATCAGAGGAGCTTCAAGTaGTCAGAGTGGAGCAGACTG +
Preference number: 4 (lower is better)
Translates to: SWSFPHPLAAPNPWASCNQRSFK*SEWSRL
Trigger: CAGTCTGCTCCACTCTGACCACTTGAAGCTCCTCTG...ATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CCA 90 bp GTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCAGCACAGGATGCGAATTTCCACGCTaGTCTCAGGGTCCTCACAAA +
Preference number: 4 (lower is better)
Translates to: VLAMKPSSTAAVIYSSTGCEFPR*SQGPHK
Trigger: TTTGTGAGGACCCTGAGACCAGCGTGGAAATTCGCA...TCCTGTGCTGGAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp ACCCCCAGAGGCTGTGCAAGGTTACAAATACTGTCTACACTGTATCACAGTTCAGCTCATGGTGACATGTaGCGGTGTTCCGGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: TPRGCARLQILSTLYHSSAHGDM*RCSGWL
Trigger: AAGCCAACCGGAACACCGTCACATGTCACCATGAGC...TGAACTGTGATACAGTGTAGACAGTATTTGTAACCTTGCACAGCCTCTGGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295720.10
CDS-3UTR TCA 90 bp AAGATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCGCTCATGGTGACATGTaGCGGTGTTCCGGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: KMNFAAFSPSSTLVALTSAHGDM*RCSGWL
Trigger: AAGCCAACCGGAACACCGTCACATGTCACCATGAGC...GGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATGCTCATGGTGACATGTaGCGGTGTTCCGGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYAHGDM*RCSGWL
Trigger: AAGCCAACCGGAACACCGTCACATGTCACCATGAGC...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp GTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCAGCACAGGACAGGTCTGCGCTTTCTaGAAGTTCACTTTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: VLAMKPSSTAAVIYSSTGQVCAF*KFTFQA
Trigger: AGCCTGAAAAGTGAACTTTCAGAAAGCGCAGACCTG...TCCTGTGCTGGAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp TCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATAGCGGCGTTGAAGTTATCATCTaGCAGGATTTCGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: SFPHPLAAPNPWASCNSGVEVII*QDFVTG
Trigger: GCCTGTGACGAAATCCTGTCAGATGATAACTTCAAC...GCCGCTATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp TCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATAGCGGCTCTTGCAATAGCGGCTaGAGTCCAGAACTTGAACTT +
Preference number: 4 (lower is better)
Translates to: SFPHPLAAPNPWASCNSGSCNSG*SPELEL
Trigger: AAGTTCAAGTTCTGGACTTCAGCCGCTATTGCAAGA...GCCGCTATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp TCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCAGCACAGGACCTTAAATCTGACAGTTTaGCAGTTACCCCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SGNEALKYRSCHILQHRTLNLTV*QLPPEA
Trigger: AGCCTCTGGGGGTAACTGTCAAACTGTCAGATTTAA...GGTCCTGTGCTGGAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295720.10
CDS-3UTR TCA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCATCCCGGCATAAAGGATaGTACACAGTTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: ERSPAGPMASWSFPHPLASRHKG*YTVWHS
Trigger: AGAATGCCAAACTGTGTATCATCCTTTATGCCGGGA...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295720.10
CDS-3UTR TCA 90 bp GATGGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCGGGCTCCACTTGTGGTaGCCCATTCTCTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: DGICFLGGIRKLPMIAEGGLHLW*PILFDL
Trigger: AAGATCAAAGAGAATGGGTCACCACAAGTGGAGCCC...GCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp CGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATCTATGAAGAAGCTGTTTaGTGCCTCCCCAAATGCGAA +
Preference number: 4 (lower is better)
Translates to: RFCRLYRNHDGICFLGGIYEEAV*CLPKCE
Trigger: TTCGCATTTGGGGAGGCATCAAACAGCTTCTTCATA...GATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp CATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTATGAAGAAGCTGTTTaGTGCCTCCCCAAATGCGAA +
Preference number: 4 (lower is better)
Translates to: HGILVFSTPSSSTQSLGIYEEAV*CLPKCE
Trigger: TTCGCATTTGGGGAGGCATCAAACAGCTTCTTCATA...GATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp CACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCAAAGTCTTCTGATAAATaGAGCTGCTGGATTCGGCCT +
Preference number: 4 (lower is better)
Translates to: HGSAGCTGTMMAFASWEAKSSDK*SCWIRP
Trigger: AGGCCGAATCCAGCAGCTTCATTTATCAGAAGACTT...TGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp TGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCAATGCCCTATGTCAATaGAGATCTCAAACAAGTCTG +
Preference number: 4 (lower is better)
Translates to: CRPHGILVFSTPSSSTQSNALCQ*RSQTSL
Trigger: CAGACTTGTTTGAGATCTTCATTGACATAGGGCATT...GGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp TCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATCAGGATTTCCTTCAAAGAACTaGAATGCTCTCCAAGCGGGG +
Preference number: 4 (lower is better)
Translates to: SAGCTGTMMAFASWEASGFPSKN*NALQAG
Trigger: CCCCGCTTGGAGAGCATTTCAGTTCTTTGAAGGAAA...TCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR GCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATGGCTGGCTGCTCCACTaGTGCTGCTACTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYGWLLH*CCYSNL
Trigger: CAAGTTTGAGTAGCAGCAGCAGTGGAGCAGCCAGCC...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp AAGATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCGGCTGGCTGCTCCACTaGTGCTGCTACTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: KMNFAAFSPSSTLVALTSGWLLH*CCYSNL
Trigger: CAAGTTTGAGTAGCAGCAGCAGTGGAGCAGCCAGCC...GGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACTTTTCAAATTGTGGTaGAAAGCTGGAGGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: RSPAGPMASWSFPHPLAALFKLW*KAGGSC
Trigger: ACAGCTTCCTCCAGCTTTGCACCACAATTTGAAAAG...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp CATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTACAAGGGTTACTCTaGTGGCTGAAGAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: HGILVFSTPSSSTQSLGILQGLL*WLKRDF
Trigger: GAAATCCCTCTTCAGCCAGCAGAGTAACCCTTGTAA...GATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp TCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATCAGGACCAGAATCCAGACAATaGTCCAGAGGAGCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: SAGCTGTMMAFASWEASGPESRQ*SRGASS
Trigger: ACTTGAAGCTCCTCTGGAGCATTGTCTGGATTCTGG...TCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR GCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATCTGCTGGATTCGGCCTaGAGCATTTGCACTGGACAG +
Preference number: 4 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYLLDSA*SICTGQ
Trigger: CTGTCCAGTGCAAATGCTGCAGGCCGAATCCAGCAG...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CCA 90 bp ATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAGGACCAGCACGTTTTATGTaGCCAGAGCAGGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ICFLGGIRKLPMIAEGKGPARFM*PEQEQE
Trigger: CTCCTGCTCCTGCTCTGGCCACATAAAACGTGCTGG...TCCTTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CCA 90 bp AAGATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCCCAGCACGTTTTATGTaGCCAGAGCAGGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KMNFAAFSPSSTLVALTSPARFM*PEQEQE
Trigger: CTCCTGCTCCTGCTCTGGCCACATAAAACGTGCTGG...GGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295720.10
ENST00000383771.8
CDS-3UTR CCA 90 bp AAGATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCGTTCACTTTTCAGGCTaGCTGCTCCACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KMNFAAFSPSSTLVALTSVHFSG*LLHCCC
Trigger: GCAGCAGCAGTGGAGCAGCCAGCCTGAAAAGTGAAC...GGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp CATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGAACTGGAGCTGCTaGAGTTATCCGAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: HGILVFSTPSSSTQSLGILNWSC*SYPKCP
Trigger: TGGACATTTCGGATAACTCCAGCAGCTCCAGTTCAA...GATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp TCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCAGCACAGGACCGTGAAGTCCCTTGTTTaGGATTGTCTTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SGNEALKYRSCHILQHRTVKSLV*DCLSPP
Trigger: AGGAGGAGAAAGACAATCCCAAACAAGGGACTTCAC...GGTCCTGTGCTGGAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCAATTCTTGGTCCCCCATaGATAGGAATGATACCTGTT +
Preference number: 4 (lower is better)
Translates to: RSPAGPMASWSFPHPLAAILGPP*IGMIPV
Trigger: AACAGGTATCATTCCTATCCATGGGGGACCAAGAAT...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp TCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATGTTCAACAGCTTCTGTaGATTCATGCCACTGACCCC +
Preference number: 4 (lower is better)
Translates to: SWSFPHPLAAPNPWASCNVQQLL*IHATDP
Trigger: GGGGTCAGTGGCATGAATCCACAGAAGCTGTTGAAC...ATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CCA 90 bp CACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCAGGTGTCAGATCTCTATaGACAATCCTCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: HGSAGCTGTMMAFASWEAGVRSL*TILFSL
Trigger: CAAGGAGAAGAGGATTGTCCATAGAGATCTGACACC...TGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CCA 90 bp CATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCGGTGTCAGATCTCTATaGACAATCCTCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: HGILVFSTPSSSTQSLGIGVRSL*TILFSL
Trigger: CAAGGAGAAGAGGATTGTCCATAGAGATCTGACACC...GATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAAATGGTAATCTGCTGTaGAAAAGTTGGGCTCAATCG +
Preference number: 4 (lower is better)
Translates to: ERSPAGPMASWSFPHPLANGNLL*KSWAQS
Trigger: CGATTGAGCCCAACTTTTTCACAGCAGATTACCATT...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp GTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCAGCACAGGATCTTGCAATAGCGGCTaGAGTCCAGAACTTGAACTT +
Preference number: 4 (lower is better)
Translates to: VLAMKPSSTAAVIYSSTGSCNSG*SPELEL
Trigger: AAGTTCAAGTTCTGGACTTCAGCCGCTATTGCAAGA...TCCTGTGCTGGAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp TGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCAGGAGGGATTTAGGATaGGGAATATTGCATCTTTTT +
Preference number: 4 (lower is better)
Translates to: CRPHGILVFSTPSSSTQSRRDLG*GILHLF
Trigger: AAAAAGATGCAATATTCCTCATCCTAAATCCCTCCT...GGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295720.10
CDS-3UTR TCA 90 bp GCTCACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGAAGCTGTTGTTTGCTTaGTTGGACGTTCAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: AHGSAGCTGTMMAFASWEKLLFA*LDVQKA
Trigger: TGCCTTTTGAACGTCCAATCAAGCAAACAACAGCTT...CTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGTGGATTCATGCCACTaGCCCCGAGCTCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSVDSCH*PRALCP
Trigger: TGGACACAGAGCTCGGGGTCAGTGGCATGAATCCAC...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCATTCTCCCTACATTCTTaGCTTTCTGCTAAACTAGCC +
Preference number: 4 (lower is better)
Translates to: ERSPAGPMASWSFPHPLAFSLHS*LSAKLA
Trigger: GGCTAGTTTAGCAGAAAGTCAAGAATGTAGGGAGAA...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp GTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCAGCACAGGAAAGTCTTCTGATAAATaGAGCTGCTGGATTCGGCCT +
Preference number: 4 (lower is better)
Translates to: VLAMKPSSTAAVIYSSTGKSSDK*SCWIRP
Trigger: AGGCCGAATCCAGCAGCTTCATTTATCAGAAGACTT...TCCTGTGCTGGAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp GGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAGGAGGAGCCAGCACGCAGGCTGCTTGAAGTaGGAAAGTATTTTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: GRHQEASNDSRRQRRSQHAGCLK*ESIFLY
Trigger: ATACAAGAAAATACTTTCTCACTTCAAGCAGCCTGC...GTGCTGGCTCCTCCTTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp TCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATAGCGGCCACATGTGTATTATATaGATGCCACTGTCTCCACTG +
Preference number: 4 (lower is better)
Translates to: SFPHPLAAPNPWASCNSGHMCII*MPLSPL
Trigger: CAGTGGAGACAGTGGCATTCATATAATACACATGTG...GCCGCTATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR GCA 90 bp GATGGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAACCATGATGGCATTTaGTTCTTGGGAGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: DGICFLGGIRKLPMIAEGNHDGI*FLGGIR
Trigger: CCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTT...GCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR GCA 90 bp AAGATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGGCTGCTCCACTGCTaGTGCTACTCAAACTTGCCT +
Preference number: 4 (lower is better)
Translates to: KMNFAAFSPSSTLVALTSWLLHC*CYSNLP
Trigger: AGGCAAGTTTGAGTAGCAGCAGCAGTGGAGCAGCCA...GGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATTGGCTGCTCCACTGCTaGTGCTACTCAAACTTGCCT +
Preference number: 4 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYWLLHC*CYSNLP
Trigger: AGGCAAGTTTGAGTAGCAGCAGCAGTGGAGCAGCCA...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp CTGTCTACACTGTATCACAGTTCAAGACCACTAGCACCCAAGTGGTTAAGCGAGCTTGCCACAAGAATGTaGCCATCTGTGGCCCATGAT +
Preference number: 4 (lower is better)
Translates to: LSTLYHSSRPLAPKWLSELATRM*PSVAHD
Trigger: ATCATGGGCCACAGATGGGCACATTCTTGTGGCAAG...CTCGCTTAACCACTTGGGTGCTAGTGGTCTTGAACTGTGATACAGTGTAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295720.10
CDS-3UTR GCA 90 bp CAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGCCTCGGCCTGCAGCATTTaGACTGGACAGGCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: QHTGSSDILYIMCSGNEASACSI*TGQASN
Trigger: ATTGGAAGCCTGTCCAGTGCAAATGCTGCAGGCCGA...GGCTTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CCA 90 bp ATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTTCAGAGGGCTTGAACTaGAGCTGCTGGAGTTATCCG +
Preference number: 4 (lower is better)
Translates to: MNFAAFSPSSTLVALTSCSEGLN*SCWSYP
Trigger: CGGATAACTCCAGCAGCTCCAGTTCAAGCCCTCTGA...ACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp CAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAACAGCAGGAAGGCTATaGGACTGCCACCCTGTCACT +
Preference number: 4 (lower is better)
Translates to: QQHTGSSDILYIMCSGNETAGRL*DCHPVT
Trigger: AGTGACAGGGTGGCAGTCCCATAGCCTTCCTGCTGT...TTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp TCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATCAAGGGTTACTCTGCTaGCTGAAGAGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: SWSFPHPLAAPNPWASCNQGLLC*LKRDFL
Trigger: CAAGAAATCCCTCTTCAGCCAGCAGAGTAACCCTTG...ATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp AAGATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCGGCCCCATGGCATCTTaGTCTTTTCCACACCCTCTA +
Preference number: 4 (lower is better)
Translates to: KMNFAAFSPSSTLVALTSGPMAS*SFPHPL
Trigger: TAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCC...GGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp GGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAGGCCAGCTGCACCGTTaGTTTTCCAATCAAATCCTC +
Preference number: 4 (lower is better)
Translates to: GICFLGGIRKLPMIAEGKGQLHR*FSNQIL
Trigger: GAGGATTTGATTGGAAAACCAACGGTGCAGCTGGCC...TTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CCA 90 bp TTAATTGGCTCACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCGTTCAACAGCTTCTGTaGATTCATGCCACTGACCCC +
Preference number: 4 (lower is better)
Translates to: LIGSRFCRLYRNHDGICFVQQLL*IHATDP
Trigger: GGGGTCAGTGGCATGAATCCACAGAAGCTGTTGAAC...GAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGAGCCAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CCA 90 bp CATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCAGCCGAGGTACTCATTaGCTACAATCTCCATATACT +
Preference number: 4 (lower is better)
Translates to: HGILVFSTPSSSTQSLGISRGTH*LQSPYT
Trigger: AGTATATGGAGATTGTAGCCAATGAGTACCTCGGCT...GATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CCA 90 bp GGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAATGCGAATTTCCACGCTaGTCTCAGGGTCCTCACAAA +
Preference number: 4 (lower is better)
Translates to: GICFLGGIRKLPMIAEGKCEFPR*SQGPHK
Trigger: TTTGTGAGGACCCTGAGACCAGCGTGGAAATTCGCA...TTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CCA 90 bp TTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAGGAGGAGCCTGGACAGGCTTCCAATaGAGGAGTGATCAGAAACAA +
Preference number: 4 (lower is better)
Translates to: FLGGIRKLPMIAEGKGGAWTGFQ*RSDQKQ
Trigger: TTGTTTCTGATCACTCCTCCATTGGAAGCCTGTCCA...GGCTCCTCCTTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
3UTR CAA 72 bp TGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTaGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CRLYRNHDGICF*GGIRKLPMIAE
Trigger: TTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp TCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATAGCGGCCTGATATCATCGAACTaGCTTCTACAATATCTGGAC +
Preference number: 4 (lower is better)
Translates to: SFPHPLAAPNPWASCNSGLISSN*LLQYLD
Trigger: GTCCAGATATTGTAGAAGTCAGTTCGATGATATCAG...GCCGCTATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp ACCCCCAGAGGCTGTGCAAGGTTACAAATACTGTCTACACTGTATCACAGTTCACATCTTTTGGTTGGGTaGTTCTTGGTCCCCCATGGA +
Preference number: 4 (lower is better)
Translates to: TPRGCARLQILSTLYHSSHLLVG*FLVPHG
Trigger: TCCATGGGGGACCAAGAATCACCCAACCAAAAGATG...TGAACTGTGATACAGTGTAGACAGTATTTGTAACCTTGCACAGCCTCTGGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000295720.10
CDS-3UTR TCA 90 bp CATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCCTGAAGTCCAGAACTTaGACTTCACTGAGAAAATCA +
Preference number: 4 (lower is better)
Translates to: HGILVFSTPSSSTQSLGILKSRT*TSLRKS
Trigger: TGATTTTCTCAGTGAAGTTCAAGTTCTGGACTTCAG...GATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp CAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGCCAATGTGTTCTGGCAATaGAGCCCTCAAGTACCGCAG +
Preference number: 4 (lower is better)
Translates to: QHTGSSDILYIMCSGNEANVFWQ*SPQVPQ
Trigger: CTGCGGTACTTGAGGGCTTCATTGCCAGAACACATT...GGCTTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATAATGTGTTCTGGCAATaGAGCCCTCAAGTACCGCAG +
Preference number: 4 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYNVFWQ*SPQVPQ
Trigger: CTGCGGTACTTGAGGGCTTCATTGCCAGAACACATT...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp GGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAGGAGGAGCCAGCACGATTTTCTACAATGTTaGGTTCACTTATCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GRHQEASNDSRRQRRSQHDFLQC*VHLSSP
Trigger: GGGAGAAGATAAGTGAACTCAACATTGTAGAAAATC...GTGCTGGCTCCTCCTTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp GGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAGGAGGAGCCAGCACGAAATCTCAAGGCTCTaGAAGCATAACACTGTAATA +
Preference number: 4 (lower is better)
Translates to: GRHQEASNDSRRQRRSQHEISRL*KHNTVI
Trigger: TATTACAGTGTTATGCTTTCAGAGCCTTGAGATTTC...GTGCTGGCTCCTCCTTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCAATTCTTCATAAGCACTaGTATCACGTACATAATGCC +
Preference number: 4 (lower is better)
Translates to: RSPAGPMASWSFPHPLAAILHKH*YHVHNA
Trigger: GGCATTATGTACGTGATATCAGTGCTTATGAAGAAT...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAACAAGTCTGGGAATGTaGATTCTTCTGGTTATACCA +
Preference number: 4 (lower is better)
Translates to: ERSPAGPMASWSFPHPLATSLGM*ILLVIP
Trigger: TGGTATAACCAGAAGAATTCACATTCCCAGACTTGT...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp CAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGCCTGCCACTGTCTCCACTaGTGCAAGTTGACAAGTCTG +
Preference number: 4 (lower is better)
Translates to: QHTGSSDILYIMCSGNEACHCLH*CKLTSL
Trigger: CAGACTTGTCAACTTGCATCAGTGGAGACAGTGGCA...GGCTTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR GCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATCTGCTCCACTGCTGCTaGTACTCAAACTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYLLHCC*YSNLPS
Trigger: AGAAGGCAAGTTTGAGTAGCAGCAGCAGTGGAGCAG...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp TCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATAGAGTAGATACCTTCTaGGACTGGTTCATATACCGC +
Preference number: 4 (lower is better)
Translates to: SWSFPHPLAAPNPWASCNRVDTF*DWFIYR
Trigger: GCGGTATATGAACCAGTCCCAGAAGGTATCTACTCT...ATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp TATATAATGTGTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCACAGCAGGAAGGCTATaGGACTGCCACCCTGTCACT +
Preference number: 4 (lower is better)
Translates to: YIMCSGNEALKYRSCHILTAGRL*DCHPVT
Trigger: AGTGACAGGGTGGCAGTCCCATAGCCTTCCTGCTGT...GAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAACACATTATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp GTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCAGCACAGGAATTCTTGGTCCCCCATaGATAGGAATGATACCTGTT +
Preference number: 4 (lower is better)
Translates to: VLAMKPSSTAAVIYSSTGILGPP*IGMIPV
Trigger: AACAGGTATCATTCCTATCCATGGGGGACCAAGAAT...TCCTGTGCTGGAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAAGCATTTTCATCTTTTaGTTGGGTGATTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: ERSPAGPMASWSFPHPLASIFIF*LGDSWS
Trigger: GGACCAAGAATCACCCAACCAAAAGATGAAAATGCT...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp TATATAATGTGTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCGCAGCACCCAATCCTTaGGCATCTTGCAATAGCGGC +
Preference number: 4 (lower is better)
Translates to: YIMCSGNEALKYRSCHILAAPNP*ASCNSG
Trigger: GCCGCTATTGCAAGATGCCCAAGGATTGGGTGCTGC...GAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAACACATTATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGCAGCACCCAATCCTTaGGCATCTTGCAATAGCGGC +
Preference number: 4 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSAAPNP*ASCNSG
Trigger: GCCGCTATTGCAAGATGCCCAAGGATTGGGTGCTGC...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp GATGGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCTTTACTAATGTCTTGTaGGCTCCACTTGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: DGICFLGGIRKLPMIAEGFTNVL*APLVVT
Trigger: GGTCACCACAAGTGGAGCCCACAAGACATTAGTAAA...GCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp CATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTTCATCATGACATCTaGTATCATCGAACTGACTTC +
Preference number: 4 (lower is better)
Translates to: HGILVFSTPSSSTQSLGIFHHDI*YHRTDF
Trigger: GAAGTCAGTTCGATGATATCAGATGTCATGATGAAA...GATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp TCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATAGCGGCGGTTCTGGAGATCCCTaGGATAACTTTTTAATTTCA +
Preference number: 4 (lower is better)
Translates to: SFPHPLAAPNPWASCNSGGSGDP*DNFLIS
Trigger: TGAAATTAAAAAGTTATCTCAGGGATCTCCAGAACC...GCCGCTATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp CAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAACATCTTTTGGTTGGGTaGTTCTTGGTCCCCCATGGA +
Preference number: 4 (lower is better)
Translates to: QQHTGSSDILYIMCSGNEHLLVG*FLVPHG
Trigger: TCCATGGGGGACCAAGAATCACCCAACCAAAAGATG...TTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp ATACTGTCTACACTGTATCACAGTTCAAGACCACTAGCACCCAAGTGGTTAAGCAATGTGTTCTGGCAATaGAGCCCTCAAGTACCGCAG +
Preference number: 4 (lower is better)
Translates to: ILSTLYHSSRPLAPKWLSNVFWQ*SPQVPQ
Trigger: CTGCGGTACTTGAGGGCTTCATTGCCAGAACACATT...GCTTAACCACTTGGGTGCTAGTGGTCTTGAACTGTGATACAGTGTAGACAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295720.10
CDS-3UTR TCA 90 bp GGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCAACACTCTCAGAAAATaGATAGATGGGGCTCGATTA +
Preference number: 4 (lower is better)
Translates to: GCTGTMMAFASWEASGSFNTLRK*IDGARL
Trigger: TAATCGAGCCCCATCTATTCATTTTCTGAGAGTGTT...GAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp GTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCAGCACAGGAAAATATATGTCATGTTaGCCAGCTTGTCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: VLAMKPSSTAAVIYSSTGKYMSC*PACPQC
Trigger: ACACTGTGGACAAGCTGGTCAACATGACATATATTT...TCCTGTGCTGGAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp TCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCAGCACAGGACCGATTTTCTACAATGTTaGGTTCACTTATCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SGNEALKYRSCHILQHRTDFLQC*VHLSSP
Trigger: GGGAGAAGATAAGTGAACTCAACATTGTAGAAAATC...GGTCCTGTGCTGGAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp AAGATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTTTCCTTCAAAGAACTaGAATGCTCTCCAAGCGGGG +
Preference number: 4 (lower is better)
Translates to: KMNFAAFSPSSTLVALTSFPSKN*NALQAG
Trigger: CCCCGCTTGGAGAGCATTTCAGTTCTTTGAAGGAAA...GGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR GCA 90 bp ATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTAACCATGATGGCATTTaGTTCTTGGGAGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: MNFAAFSPSSTLVALTSCNHDGI*FLGGIR
Trigger: CCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTT...ACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295720.10
ENST00000383771.8
CDS-3UTR GCA 90 bp CAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAACTGCTCCACTGCTGCTaGTACTCAAACTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QQHTGSSDILYIMCSGNELLHCC*YSNLPS
Trigger: AGAAGGCAAGTTTGAGTAGCAGCAGCAGTGGAGCAG...TTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp AAGATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCGGCTTGAACTGGAGCTaGTGGAGTTATCCGAAATGT +
Preference number: 4 (lower is better)
Translates to: KMNFAAFSPSSTLVALTSGLNWS*WSYPKC
Trigger: ACATTTCGGATAACTCCAGCAGCTCCAGTTCAAGCC...GGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATGGCTTGAACTGGAGCTaGTGGAGTTATCCGAAATGT +
Preference number: 4 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYGLNWS*WSYPKC
Trigger: ACATTTCGGATAACTCCAGCAGCTCCAGTTCAAGCC...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp CAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGCCGGCTTGAACTGGAGCTaGTGGAGTTATCCGAAATGT +
Preference number: 4 (lower is better)
Translates to: QHTGSSDILYIMCSGNEAGLNWS*WSYPKC
Trigger: ACATTTCGGATAACTCCAGCAGCTCCAGTTCAAGCC...GGCTTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp TATATAATGTGTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCCTTATCATTGTCCCTaGTGCTGTCACCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YIMCSGNEALKYRSCHILPYHCP*CCHLLL
Trigger: CAGCAGCAGGTGACAGCAGCAGGGACAATGATAAGG...GAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAACACATTATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR GCA 90 bp GGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCTGGAAGCTGTTGTTTaGTTGATTGGACGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: GCTGTMMAFASWEASGSFLEAVV*LIGRSK
Trigger: TTTTGAACGTCCAATCAAGCAAACAACAGCTTCCAG...GAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR GCA 90 bp CGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATCCAATATTCCTTACGCTaGTGTCTCGATCTTTCTTAT +
Preference number: 4 (lower is better)
Translates to: RFCRLYRNHDGICFLGGIQYSLR*CLDLSY
Trigger: ATAAGAAAGATCGAGACAGCAGCGTAAGGAATATTG...GATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR GCA 90 bp TCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATCAGGATTCTTGTTTTTGCTTTaGCAGGCCAAAGTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: SAGCTGTMMAFASWEASGFLFLL*QAKVSN
Trigger: GTTACTGACTTTGGCCTGGCAAAGCAAAAACAAGAA...TCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CCA 90 bp AAGATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCATGGCATTTGCTTCTTaGGAGGCATCAGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: KMNFAAFSPSSTLVALTSMAFAS*EASGSF
Trigger: GAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCAT...GGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295720.10
ENST00000383771.8
CDS-3UTR CCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATGACTTCTACAATATCTaGACGAGCTTCCGCATCAGG +
Preference number: 4 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYDFYNI*TSFRIR
Trigger: CCTGATGCGGAAGCTCGTCCAGATATTGTAGAAGTC...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp AAGATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCGACTTCTACAATATCTaGACGAGCTTCCGCATCAGG +
Preference number: 4 (lower is better)
Translates to: KMNFAAFSPSSTLVALTSDFYNI*TSFRIR
Trigger: CCTGATGCGGAAGCTCGTCCAGATATTGTAGAAGTC...GGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp CATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTTTCCAAGGACAACTaGGATGTAGATAAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: HGILVFSTPSSSTQSLGIFSKDN*DVDKLS
Trigger: AGACAACTTATCTACATCCCAGTTGTCCTTGGAAAA...GATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp ATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTTGGTTGGGTGATTCTTaGTCCCCCATGGATAGGAAT +
Preference number: 4 (lower is better)
Translates to: MNFAAFSPSSTLVALTSCWLGDS*SPMDRN
Trigger: ATTCCTATCCATGGGGGACCAAGAATCACCCAACCA...ACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp GATGGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCCAGAAAATGAATAGATaGGGCTCGATTAACCCACTC +
Preference number: 4 (lower is better)
Translates to: DGICFLGGIRKLPMIAEGQKMNR*GSINPL
Trigger: GAGTGGGTTAATCGAGCCCCATCTATTCATTTTCTG...GCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp TCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATCTGATATCATCGAACTaGCTTCTACAATATCTGGAC +
Preference number: 4 (lower is better)
Translates to: SWSFPHPLAAPNPWASCNLISSN*LLQYLD
Trigger: GTCCAGATATTGTAGAAGTCAGTTCGATGATATCAG...ATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp CAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGCCGTTGAAGTTATCATCTaGCAGGATTTCGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: QHTGSSDILYIMCSGNEAVEVII*QDFVTG
Trigger: GCCTGTGACGAAATCCTGTCAGATGATAACTTCAAC...GGCTTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTTTCTTTCAGAGGGCTTaGACTGGAGCTGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSFFQRA*TGAAGV
Trigger: AACTCCAGCAGCTCCAGTTCAAGCCCTCTGAAAGAA...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp CAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGCCGTGGCCCATGATCTTTaGGATTTCGAAGAATCACAG +
Preference number: 4 (lower is better)
Translates to: QHTGSSDILYIMCSGNEAVAHDL*DFEESQ
Trigger: CTGTGATTCTTCGAAATCTCAAAGATCATGGGCCAC...GGCTTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295720.10
ENST00000429845.6
CDS-3UTR TCA 90 bp TATATAATGTGTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCATAGGATCACTGATCTaGCGCACTTTCCTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: YIMCSGNEALKYRSCHILIGSLI*RTFLWD
Trigger: GTCCCAGAGGAAAGTGCGTCAGATCAGTGATCCTAT...GAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAACACATTATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp TCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATGAACTTGAACTTCACTaGGAAAATCAAGTCCACTCA +
Preference number: 4 (lower is better)
Translates to: SWSFPHPLAAPNPWASCNELELH*ENQVHS
Trigger: TGAGTGGACTTGATTTTCTCAGTGAAGTTCAAGTTC...ATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp TATATAATGTGTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCGGGCTCCACTTGTGGTaGCCCATTCTCTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: YIMCSGNEALKYRSCHILGLHLW*PILFDL
Trigger: AAGATCAAAGAGAATGGGTCACCACAAGTGGAGCCC...GAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAACACATTATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp AGAAAGAAGAGAGGTTTAATTGGCTCACGGTTCTGCAGGCTGTACAGGAACCATGCACAGCAGGCTGCTTaGAGTGAGAAAGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: RKKRGLIGSRFCRLYRNHAQQAA*SEKVFS
Trigger: AGAAAATACTTTCTCACTTCAAGCAGCCTGCTGTGC...ATGGTTCCTGTACAGCCTGCAGAACCGTGAGCCAATTAAACCTCTCTTCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp AAGATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCGCACAGCAGGCTGCTTaGAGTGAGAAAGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: KMNFAAFSPSSTLVALTSAQQAA*SEKVFS
Trigger: AGAAAATACTTTCTCACTTCAAGCAGCCTGCTGTGC...GGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp GATGGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAATGCCCTATGTCAATaGAGATCTCAAACAAGTCTG +
Preference number: 4 (lower is better)
Translates to: DGICFLGGIRKLPMIAEGNALCQ*RSQTSL
Trigger: CAGACTTGTTTGAGATCTTCATTGACATAGGGCATT...GCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp TTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAGGAGGAGCCATTCTTCATAAGCACTaGTATCACGTACATAATGCC +
Preference number: 4 (lower is better)
Translates to: FLGGIRKLPMIAEGKGGAILHKH*YHVHNA
Trigger: GGCATTATGTACGTGATATCAGTGCTTATGAAGAAT...GGCTCCTCCTTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR GCA 90 bp CTGTCTACACTGTATCACAGTTCAAGACCACTAGCACCCAAGTGGTTAAGCGAGCTTTTCAAATTGTGGTaGAAAGCTGGAGGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LSTLYHSSRPLAPKWLSELFKLW*KAGGSC
Trigger: ACAGCTTCCTCCAGCTTTGCACCACAATTTGAAAAG...CTCGCTTAACCACTTGGGTGCTAGTGGTCTTGAACTGTGATACAGTGTAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295720.10
CDS-3UTR GCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATTTACAAGGGTTACTCTaGTGGCTGAAGAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYLQGLL*WLKRDF
Trigger: GAAATCCCTCTTCAGCCAGCAGAGTAACCCTTGTAA...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp AAGAAGAGAGGTTTAATTGGCTCACGGTTCTGCAGGCTGTACAGGAACCATGATGCTCAGACTTCGTCATaGTATTTTGGGCACTATCGA +
Preference number: 4 (lower is better)
Translates to: KKRGLIGSRFCRLYRNHDAQTSS*YFGHYR
Trigger: TCGATAGTGCCCAAAATAGCATGACGAAGTCTGAGC...ATCATGGTTCCTGTACAGCCTGCAGAACCGTGAGCCAATTAAACCTCTCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CCA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGATACCTTCTGGGACTaGTTCATATACCGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSDTFWD*FIYRLH
Trigger: GTGGAGGCGGTATATGAACCAGTCCCAGAAGGTATC...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATAGAGTAGATACCTTCTaGGACTGGTTCATATACCGC +
Preference number: 4 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYRVDTF*DWFIYR
Trigger: GCGGTATATGAACCAGTCCCAGAAGGTATCTACTCT...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp ATACTGTCTACACTGTATCACAGTTCAAGACCACTAGCACCCAAGTGGTTAAGCGACTTCTACAATATCTaGACGAGCTTCCGCATCAGG +
Preference number: 4 (lower is better)
Translates to: ILSTLYHSSRPLAPKWLSDFYNI*TSFRIR
Trigger: CCTGATGCGGAAGCTCGTCCAGATATTGTAGAAGTC...GCTTAACCACTTGGGTGCTAGTGGTCTTGAACTGTGATACAGTGTAGACAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295720.10
CDS-3UTR CCA 90 bp GTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCAGCACAGGATTTTCCAAGGACAACTaGGATGTAGATAAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: VLAMKPSSTAAVIYSSTGFSKDN*DVDKLS
Trigger: AGACAACTTATCTACATCCCAGTTGTCCTTGGAAAA...TCCTGTGCTGGAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATGTGAAGTCCCTTGTTTaGGATTGTCTTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYVKSLV*DCLSPP
Trigger: AGGAGGAGAAAGACAATCCCAAACAAGGGACTTCAC...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp TCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATAGCATTTTCATCTTTTaGTTGGGTGATTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: SWSFPHPLAAPNPWASCNSIFIF*LGDSWS
Trigger: GGACCAAGAATCACCCAACCAAAAGATGAAAATGCT...ATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp GGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAAGCCGAGGTACTCATTaGCTACAATCTCCATATACT +
Preference number: 4 (lower is better)
Translates to: GICFLGGIRKLPMIAEGKSRGTH*LQSPYT
Trigger: AGTATATGGAGATTGTAGCCAATGAGTACCTCGGCT...TTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CCA 90 bp AAGATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGGACAGGCTTCCAATaGAGGAGTGATCAGAAACAA +
Preference number: 4 (lower is better)
Translates to: KMNFAAFSPSSTLVALTSWTGFQ*RSDQKQ
Trigger: TTGTTTCTGATCACTCCTCCATTGGAAGCCTGTCCA...GGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CCA 90 bp GCTCACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGAATAACGTACAATGTTaGGATGATAAAGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: AHGSAGCTGTMMAFASWENNVQC*DDKAAL
Trigger: AAGAGCAGCTTTATCATCCCAACATTGTACGTTATT...CTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTCCCATCTGTGGCCCATaGTCTTTGAGATTTCGAAGA +
Preference number: 4 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSPICGP*SLRFRR
Trigger: TCTTCGAAATCTCAAAGATCATGGGCCACAGATGGG...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295720.10
ENST00000429845.6
CDS-3UTR TCA 90 bp CAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGCCAAGCTGTTGTTTGCTTaGTTGGACGTTCAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: QHTGSSDILYIMCSGNEAKLLFA*LDVQKA
Trigger: TGCCTTTTGAACGTCCAATCAAGCAAACAACAGCTT...GGCTTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp AGAAAGAAGAGAGGTTTAATTGGCTCACGGTTCTGCAGGCTGTACAGGAACCATTTCTCCCTACATTCTTaGCTTTCTGCTAAACTAGCC +
Preference number: 4 (lower is better)
Translates to: RKKRGLIGSRFCRLYRNHFSLHS*LSAKLA
Trigger: GGCTAGTTTAGCAGAAAGTCAAGAATGTAGGGAGAA...ATGGTTCCTGTACAGCCTGCAGAACCGTGAGCCAATTAAACCTCTCTTCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR GCA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTCCATCTGATAAAGGATaGAGCCTACTGCCCAGACAT +
Preference number: 4 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSPSDKG*SLLPRH
Trigger: ATGTCTGGGCAGTAGGCTGCATCCTTTATCAGATGG...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp TCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATCAATATTCCTTACGCTaGTGTCTCGATCTTTCTTAT +
Preference number: 4 (lower is better)
Translates to: SWSFPHPLAAPNPWASCNQYSLR*CLDLSY
Trigger: ATAAGAAAGATCGAGACAGCAGCGTAAGGAATATTG...ATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR GCA 90 bp TTAATTGGCTCACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCCTGTTTTCTTGTTTTTaGTTTGCCAGGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LIGSRFCRLYRNHDGICFLFSCF*FARPKS
Trigger: TGACTTTGGCCTGGCAAAGCAAAAACAAGAAAACAG...GAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGAGCCAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CCA 90 bp CACCAGAGTTTTAAGAAGCTGATTGAAGAGAAGGAGTTTAAGCCCAGTGAGAATGATACCTTCTGGGACTaGTTCATATACCGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: HQSFKKLIEEKEFKPSENDTFWD*FIYRLH
Trigger: GTGGAGGCGGTATATGAACCAGTCCCAGAAGGTATC...ATTCTCACTGGGCTTAAACTCCTTCTCTTCAATCAGCTTCTTAAAACTCTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295720.10
CDS-3UTR CCA 90 bp CAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAATTGAACTGGAGCTGCTaGAGTTATCCGAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: QQHTGSSDILYIMCSGNELNWSC*SYPKCP
Trigger: TGGACATTTCGGATAACTCCAGCAGCTCCAGTTCAA...TTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTTCTATTTCCTTAATGTaGGCCCTGAGCATGTGGGGT +
Preference number: 4 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSSISLM*ALSMWG
Trigger: ACCCCACATGCTCAGGGCCCACATTAAGGAAATAGA...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTCAAGGGTTACTCTGCTaGCTGAAGAGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSQGLLC*LKRDFL
Trigger: CAAGAAATCCCTCTTCAGCCAGCAGAGTAACCCTTG...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp ACCCCCAGAGGCTGTGCAAGGTTACAAATACTGTCTACACTGTATCACAGTTCAATTCTTGGTCCCCCATaGATAGGAATGATACCTGTT +
Preference number: 4 (lower is better)
Translates to: TPRGCARLQILSTLYHSSILGPP*IGMIPV
Trigger: AACAGGTATCATTCCTATCCATGGGGGACCAAGAAT...TGAACTGTGATACAGTGTAGACAGTATTTGTAACCTTGCACAGCCTCTGGGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000295720.10
CDS-3UTR CCA 90 bp TATATAATGTGTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCTGGTTGGGTGATTCTTaGTCCCCCATGGATAGGAAT +
Preference number: 4 (lower is better)
Translates to: YIMCSGNEALKYRSCHILWLGDS*SPMDRN
Trigger: ATTCCTATCCATGGGGGACCAAGAATCACCCAACCA...GAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAACACATTATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp CTGTCTACACTGTATCACAGTTCAAGACCACTAGCACCCAAGTGGTTAAGCGAGAGCATTTTCATCTTTTaGTTGGGTGATTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LSTLYHSSRPLAPKWLSESIFIF*LGDSWS
Trigger: GGACCAAGAATCACCCAACCAAAAGATGAAAATGCT...CTCGCTTAACCACTTGGGTGCTAGTGGTCTTGAACTGTGATACAGTGTAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295720.10
CDS-3UTR CCA 90 bp GGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAAAGCAAAAGCTTCATTaGCCATTTCTGACTTTTCGC +
Preference number: 4 (lower is better)
Translates to: GICFLGGIRKLPMIAEGKKQKLH*PFLTFR
Trigger: GCGAAAAGTCAGAAATGGCCAATGAAGCTTTTGCTT...TTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CCA 90 bp GATGGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCTTCGTCATGCTATTTTaGGCACTATCGAAGTTAATG +
Preference number: 4 (lower is better)
Translates to: DGICFLGGIRKLPMIAEGFVMLF*ALSKLM
Trigger: CATTAACTTCGATAGTGCCCAAAATAGCATGACGAA...GCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATCAGAAAATGAATAGATaGGGCTCGATTAACCCACTC +
Preference number: 4 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYQKMNR*GSINPL
Trigger: GAGTGGGTTAATCGAGCCCCATCTATTCATTTTCTG...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CCA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGAATGTGAATTCTTCTaGTTATACCACGCGCGGGAG +
Preference number: 4 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSECEFF*LYHARE
Trigger: CTCCCGCGCGTGGTATAACCAGAAGAATTCACATTC...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATCTGATATCATCGAACTaGCTTCTACAATATCTGGAC +
Preference number: 4 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYLISSN*LLQYLD
Trigger: GTCCAGATATTGTAGAAGTCAGTTCGATGATATCAG...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp ATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTCTGGAGGAAGCTGTGTaGTATAGATTATTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: MNFAAFSPSSTLVALTSCLEEAV*YRLFCA
Trigger: TGCACAAAATAATCTATATCACACAGCTTCCTCCAG...ACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATCTGAAGTCCAGAACTTaGACTTCACTGAGAAAATCA +
Preference number: 4 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYLKSRT*TSLRKS
Trigger: TGATTTTCTCAGTGAAGTTCAAGTTCTGGACTTCAG...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp CAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGCCCTGAAGTCCAGAACTTaGACTTCACTGAGAAAATCA +
Preference number: 4 (lower is better)
Translates to: QHTGSSDILYIMCSGNEALKSRT*TSLRKS
Trigger: TGATTTTCTCAGTGAAGTTCAAGTTCTGGACTTCAG...GGCTTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp AAGAAGAGAGGTTTAATTGGCTCACGGTTCTGCAGGCTGTACAGGAACCATGATAAATATATGTCATGTTaGCCAGCTTGTCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: KKRGLIGSRFCRLYRNHDKYMSC*PACPQC
Trigger: ACACTGTGGACAAGCTGGTCAACATGACATATATTT...ATCATGGTTCCTGTACAGCCTGCAGAACCGTGAGCCAATTAAACCTCTCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp CAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGCCCTGATGCATGATCTTTaGGATTTCGAAGAATCACAG +
Preference number: 4 (lower is better)
Translates to: QHTGSSDILYIMCSGNEALMHDL*DFEESQ
Trigger: CTGTGATTCTTCGAAATCTCAAAGATCATGCATCAG...GGCTTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383771.8
CDS-3UTR GCA 90 bp CAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAACTTTTCAAATTGTGGTaGAAAGCTGGAGGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: QQHTGSSDILYIMCSGNELFKLW*KAGGSC
Trigger: ACAGCTTCCTCCAGCTTTGCACCACAATTTGAAAAG...TTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp ATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTTTCTTGTTTTTGCTTTaGCAGGCCAAAGTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: MNFAAFSPSSTLVALTSCFLFLL*QAKVSN
Trigger: GTTACTGACTTTGGCCTGGCAAAGCAAAAACAAGAA...ACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR GCA 90 bp CAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGCCCTGTTTTCTTGTTTTTaGTTTGCCAGGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: QHTGSSDILYIMCSGNEALFSCF*FARPKS
Trigger: TGACTTTGGCCTGGCAAAGCAAAAACAAGAAAACAG...GGCTTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CCA 90 bp TATATAATGTGTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCGTGAAGTCCCTTGTTTaGGATTGTCTTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: YIMCSGNEALKYRSCHILVKSLV*DCLSPP
Trigger: AGGAGGAGAAAGACAATCCCAAACAAGGGACTTCAC...GAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAACACATTATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp TATATAATGTGTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCTTTACTAATGTCTTGTaGGCTCCACTTGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: YIMCSGNEALKYRSCHILFTNVL*APLVVT
Trigger: GGTCACCACAAGTGGAGCCCACAAGACATTAGTAAA...GAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAACACATTATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CCA 90 bp TTAATTGGCTCACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCCAACATAATGTTGTTTaGTGTCAGATCTCTATGGAC +
Preference number: 4 (lower is better)
Translates to: LIGSRFCRLYRNHDGICFQHNVV*CQISMD
Trigger: GTCCATAGAGATCTGACACCAAACAACATTATGTTG...GAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGAGCCAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR TCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATTTCATCATCTACCTCTaGATATGTATCTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYFIIYL*ICIFLS
Trigger: GCTGAGAAAGATACATATTCAGAGGTAGATGATGAA...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp CAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGCCTTCATCATCTACCTCTaGATATGTATCTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: QHTGSSDILYIMCSGNEAFIIYL*ICIFLS
Trigger: GCTGAGAAAGATACATATTCAGAGGTAGATGATGAA...GGCTTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp CAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAACTGGAGGAAGCTGTGTaGTATAGATTATTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: QQHTGSSDILYIMCSGNELEEAV*YRLFCA
Trigger: TGCACAAAATAATCTATATCACACAGCTTCCTCCAG...TTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTAATGGTAATCTGCTGTaGAAAAGTTGGGCTCAATCG +
Preference number: 4 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSNGNLL*KSWAQS
Trigger: CGATTGAGCCCAACTTTTTCACAGCAGATTACCATT...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp TATATAATGTGTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCAATGGTAATCTGCTGTaGAAAAGTTGGGCTCAATCG +
Preference number: 4 (lower is better)
Translates to: YIMCSGNEALKYRSCHILNGNLL*KSWAQS
Trigger: CGATTGAGCCCAACTTTTTCACAGCAGATTACCATT...GAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAACACATTATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR GCA 90 bp TTAATTGGCTCACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCATATTTTCAGCAATTTaGTTCAGTTCATCCTCCACT +
Preference number: 4 (lower is better)
Translates to: LIGSRFCRLYRNHDGICFIFSAI*FSSSST
Trigger: AGTGGAGGATGAACTGAAGCAAATTGCTGAAAATAT...GAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGAGCCAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATTTTTCCAAGGACAACTaGGATGTAGATAAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYFSKDN*DVDKLS
Trigger: AGACAACTTATCTACATCCCAGTTGTCCTTGGAAAA...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CCA 90 bp AAGATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTTCGTCATGCTATTTTaGGCACTATCGAAGTTAATG +
Preference number: 4 (lower is better)
Translates to: KMNFAAFSPSSTLVALTSFVMLF*ALSKLM
Trigger: CATTAACTTCGATAGTGCCCAAAATAGCATGACGAA...GGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CCA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATCAACATAATGTTGTTTaGTGTCAGATCTCTATGGAC +
Preference number: 4 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYQHNVV*CQISMD
Trigger: GTCCATAGAGATCTGACACCAAACAACATTATGTTG...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp CAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAATTTCATCATGACATCTaGTATCATCGAACTGACTTC +
Preference number: 4 (lower is better)
Translates to: QQHTGSSDILYIMCSGNEFHHDI*YHRTDF
Trigger: GAAGTCAGTTCGATGATATCAGATGTCATGATGAAA...TTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp CAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAATTCATCATCTACCTCTaGATATGTATCTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: QQHTGSSDILYIMCSGNEFIIYL*ICIFLS
Trigger: GCTGAGAAAGATACATATTCAGAGGTAGATGATGAA...TTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp TATATAATGTGTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCTGGAGGAAGCTGTGTaGTATAGATTATTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: YIMCSGNEALKYRSCHILLEEAV*YRLFCA
Trigger: TGCACAAAATAATCTATATCACACAGCTTCCTCCAG...GAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAACACATTATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp CAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGGTTCTGGAGATCCCTaGGATAACTTTTTAATTTCA +
Preference number: 4 (lower is better)
Translates to: QQHTGSSDILYIMCSGNEGSGDP*DNFLIS
Trigger: TGAAATTAAAAAGTTATCTCAGGGATCTCCAGAACC...TTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTAACACTCTCAGAAAATaGATAGATGGGGCTCGATTA +
Preference number: 4 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSNTLRK*IDGARL
Trigger: TAATCGAGCCCCATCTATTCATTTTCTGAGAGTGTT...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp TATATAATGTGTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCGCAGGCTGCTTGAAGTaGGAAAGTATTTTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: YIMCSGNEALKYRSCHILAGCLK*ESIFLY
Trigger: ATACAAGAAAATACTTTCTCACTTCAAGCAGCCTGC...GAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAACACATTATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp CAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGAAATCTCAAGGCTCTaGAAGCATAACACTGTAATA +
Preference number: 4 (lower is better)
Translates to: QQHTGSSDILYIMCSGNEEISRL*KHNTVI
Trigger: TATTACAGTGTTATGCTTTCAGAGCCTTGAGATTTC...TTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp CTTACTGTTAAGAGGATAAGTAGACATCATATAAGCTTGCAGCTTACAAGGTACTTTCCTTCAAAGAACTaGAATGCTCTCCAAGCGGGG +
Preference number: 4 (lower is better)
Translates to: LTVKRISRHHISLQLTRYFPSKN*NALQAG
Trigger: CCCCGCTTGGAGAGCATTTCAGTTCTTTGAAGGAAA...GTACCTTGTAAGCTGCAAGCTTATATGATGTCTACTTATCCTCTTAACAGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR GCA 90 bp AGAAAGAAGAGAGGTTTAATTGGCTCACGGTTCTGCAGGCTGTACAGGAACCATATTGTAAAACATCAATaGCCCAGAATTAACATCGCA +
Preference number: 4 (lower is better)
Translates to: RKKRGLIGSRFCRLYRNHIVKHQ*PRINIA
Trigger: TGCGATGTTAATTCTGGGGCATTGATGTTTTACAAT...ATGGTTCCTGTACAGCCTGCAGAACCGTGAGCCAATTAAACCTCTCTTCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR GCA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTCTGGAAGCTGTTGTTTaGTTGATTGGACGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSLEAVV*LIGRSK
Trigger: TTTTGAACGTCCAATCAAGCAAACAACAGCTTCCAG...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR TCA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGTTCTGGAGATCCCTaGGATAACTTTTTAATTTCA +
Preference number: 4 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSGSGDP*DNFLIS
Trigger: TGAAATTAAAAAGTTATCTCAGGGATCTCCAGAACC...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR TCA 90 bp AGAAAATTATTCTTCTCTCAGAAAGTAACGAGTAGGTCAGCCTTACTGTTAAGATTTCCTTCAAAGAACTaGAATGCTCTCCAAGCGGGG +
Preference number: 4 (lower is better)
Translates to: RKLFFSQKVTSRSALLLRFPSKN*NALQAG
Trigger: CCCCGCTTGGAGAGCATTTCAGTTCTTTGAAGGAAA...TCTTAACAGTAAGGCTGACCTACTCGTTACTTTCTGAGAGAAGAATAATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR GCA 90 bp CAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAATTGTAAAACATCAATaGCCCAGAATTAACATCGCA +
Preference number: 4 (lower is better)
Translates to: QQHTGSSDILYIMCSGNEIVKHQ*PRINIA
Trigger: TGCGATGTTAATTCTGGGGCATTGATGTTTTACAAT...TTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR GCA 90 bp CAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAATATTTTCAGCAATTTaGTTCAGTTCATCCTCCACT +
Preference number: 4 (lower is better)
Translates to: QQHTGSSDILYIMCSGNEIFSAI*FSSSST
Trigger: AGTGGAGGATGAACTGAAGCAAATTGCTGAAAATAT...TTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CCA 90 bp CTTACTGTTAAGAGGATAAGTAGACATCATATAAGCTTGCAGCTTACAAGGTACGGTGTCAGATCTCTATaGACAATCCTCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LTVKRISRHHISLQLTRYGVRSL*TILFSL
Trigger: CAAGGAGAAGAGGATTGTCCATAGAGATCTGACACC...GTACCTTGTAAGCTGCAAGCTTATATGATGTCTACTTATCCTCTTAACAGTAAG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR GCA 90 bp CTTACTGTTAAGAGGATAAGTAGACATCATATAAGCTTGCAGCTTACAAGGTACAGGTACATGTTAGCCTaGCACAGTTTCTTTGCATCT +
Preference number: 4 (lower is better)
Translates to: LTVKRISRHHISLQLTRYRYMLA*HSFFAS
Trigger: AGATGCAAAGAAACTGTGGCAGGCTAACATGTACCT...GTACCTTGTAAGCTGCAAGCTTATATGATGTCTACTTATCCTCTTAACAGTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR CCA 90 bp TATATAATGTGTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCAATAACGTACAATGTTaGGATGATAAAGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: YIMCSGNEALKYRSCHILNNVQC*DDKAAL
Trigger: AAGAGCAGCTTTATCATCCCAACATTGTACGTTATT...GAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAACACATTATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR GCA 90 bp CTTACTGTTAAGAGGATAAGTAGACATCATATAAGCTTGCAGCTTACAAGGTACTTCTTGTTTTTGCTTTaGCAGGCCAAAGTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: LTVKRISRHHISLQLTRYFLFLL*QAKVSN
Trigger: GTTACTGACTTTGGCCTGGCAAAGCAAAAACAAGAA...GTACCTTGTAAGCTGCAAGCTTATATGATGTCTACTTATCCTCTTAACAGTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR GCA 90 bp CTTACTGTTAAGAGGATAAGTAGACATCATATAAGCTTGCAGCTTACAAGGTACCTGTTTTCTTGTTTTTaGTTTGCCAGGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LTVKRISRHHISLQLTRYLFSCF*FARPKS
Trigger: TGACTTTGGCCTGGCAAAGCAAAAACAAGAAAACAG...GTACCTTGTAAGCTGCAAGCTTATATGATGTCTACTTATCCTCTTAACAGTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR GCA 90 bp AGAAAATTATTCTTCTCTCAGAAAGTAACGAGTAGGTCAGCCTTACTGTTAAGAAGGTACATGTTAGCCTaGCACAGTTTCTTTGCATCT +
Preference number: 4 (lower is better)
Translates to: RKLFFSQKVTSRSALLLRRYMLA*HSFFAS
Trigger: AGATGCAAAGAAACTGTGGCAGGCTAACATGTACCT...TCTTAACAGTAAGGCTGACCTACTCGTTACTTTCTGAGAGAAGAATAATTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR TCA 90 bp CTTACTGTTAAGAGGATAAGTAGACATCATATAAGCTTGCAGCTTACAAGGTACATTCTTCATAAGCACTaGTATCACGTACATAATGCC +
Preference number: 4 (lower is better)
Translates to: LTVKRISRHHISLQLTRYILHKH*YHVHNA
Trigger: GGCATTATGTACGTGATATCAGTGCTTATGAAGAAT...GTACCTTGTAAGCTGCAAGCTTATATGATGTCTACTTATCCTCTTAACAGTAAG
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424275.1
CDS-3UTR TCA 90 bp AGAAAATTATTCTTCTCTCAGAAAGTAACGAGTAGGTCAGCCTTACTGTTAAGACTTTGCATCTTCTCATaGAACCACAAGAATACAGGA +
Preference number: 4 (lower is better)
Translates to: RKLFFSQKVTSRSALLLRLCIFS*NHKNTG
Trigger: TCCTGTATTCTTGTGGTTTCATGAGAAGATGCAAAG...TCTTAACAGTAAGGCTGACCTACTCGTTACTTTCTGAGAGAAGAATAATTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR GCA 90 bp CTTACTGTTAAGAGGATAAGTAGACATCATATAAGCTTGCAGCTTACAAGGTACCAATATTCCTTACGCTaGTGTCTCGATCTTTCTTAT +
Preference number: 4 (lower is better)
Translates to: LTVKRISRHHISLQLTRYQYSLR*CLDLSY
Trigger: ATAAGAAAGATCGAGACAGCAGCGTAAGGAATATTG...GTACCTTGTAAGCTGCAAGCTTATATGATGTCTACTTATCCTCTTAACAGTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435584.5
CDS-3UTR GCA 90 bp AGAAAATTATTCTTCTCTCAGAAAGTAACGAGTAGGTCAGCCTTACTGTTAAGACTGTTTTCTTGTTTTTaGTTTGCCAGGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: RKLFFSQKVTSRSALLLRLFSCF*FARPKS
Trigger: TGACTTTGGCCTGGCAAAGCAAAAACAAGAAAACAG...TCTTAACAGTAAGGCTGACCTACTCGTTACTTTCTGAGAGAAGAATAATTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR CCA 90 bp AGAAAATTATTCTTCTCTCAGAAAGTAACGAGTAGGTCAGCCTTACTGTTAAGACAACATAATGTTGTTTaGTGTCAGATCTCTATGGAC +
Preference number: 4 (lower is better)
Translates to: RKLFFSQKVTSRSALLLRQHNVV*CQISMD
Trigger: GTCCATAGAGATCTGACACCAAACAACATTATGTTG...TCTTAACAGTAAGGCTGACCTACTCGTTACTTTCTGAGAGAAGAATAATTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR GCA 90 bp AGAAAATTATTCTTCTCTCAGAAAGTAACGAGTAGGTCAGCCTTACTGTTAAGAATATTTTCAGCAATTTaGTTCAGTTCATCCTCCACT +
Preference number: 4 (lower is better)
Translates to: RKLFFSQKVTSRSALLLRIFSAI*FSSSST
Trigger: AGTGGAGGATGAACTGAAGCAAATTGCTGAAAATAT...TCTTAACAGTAAGGCTGACCTACTCGTTACTTTCTGAGAGAAGAATAATTTTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424275.1
CDS-3UTR CCA 90 bp AGAAAATTATTCTTCTCTCAGAAAGTAACGAGTAGGTCAGCCTTACTGTTAAGAAATAACGTACAATGTTaGGATGATAAAGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RKLFFSQKVTSRSALLLRNNVQC*DDKAAL
Trigger: AAGAGCAGCTTTATCATCCCAACATTGTACGTTATT...TCTTAACAGTAAGGCTGACCTACTCGTTACTTTCTGAGAGAAGAATAATTTTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435584.5
CDS GCA 90 bp GGGACGGTCCCTCCTTCAGGCCAATCTCCTTATCATTGTCCCTGCTaGTGTCACCTGCTGCTGCAGACCGGGGGTCCCGTCCAGTCTCAG +
Preference number: 5 (lower is better)
Translates to: GTVPPSGQSPYHCPC*CHLLLQTGGPVQSQ
Trigger: CTGAGACTGGACGGGACCCCCGGTCTGCAGCAGCAGGTGACAGCAGCAGGGACAATGATAAGGAGATTGGCCTGAAGGAGGGACCGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341435.9
ENST00000429845.6
ENST00000435750.1
CDS GCA 90 bp GGAGGGACGGTCCCTCCTTCAGGCCAATCTCCTTATCATTGTCCCTaGTGCTGTCACCTGCTGCTGCAGACCGGGGGTCCCGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: GGTVPPSGQSPYHCP*CCHLLLQTGGPVQS
Trigger: AGACTGGACGGGACCCCCGGTCTGCAGCAGCAGGTGACAGCAGCAGGGACAATGATAAGGAGATTGGCCTGAAGGAGGGACCGTCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341435.9
ENST00000429845.6
ENST00000435750.1
CDS GCA 90 bp CAGCCTATTCCCGGTCCCCTCAACCTCAGGGACACCGCGGCCAGCTaGACCGTTGGTTTTCCAATCAAATCCTCCTCCAGGCCACCAACC +
Preference number: 5 (lower is better)
Translates to: QPIPGPLNLRDTAAS*TVGFPIKSSSRPPT
Trigger: GGTTGGTGGCCTGGAGGAGGATTTGATTGGAAAACCAACGGTGCAGCTGGCCGCGGTGTCCCTGAGGTTGAGGGGACCGGGAATAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435750.1
CDS TCA 90 bp CTGTGGATTCATGCCACTGACCCCGAGCTCTGTGTCCACCCGCCCTaGTGGCGGGCTCAGACTTCGTCATGCTATTTTGGGCACTATCGA +
Preference number: 5 (lower is better)
Translates to: LWIHATDPELCVHPP*WRAQTSSCYFGHYR
Trigger: TCGATAGTGCCCAAAATAGCATGACGAAGTCTGAGCCCGCCATCAGGGCGGGTGGACACAGAGCTCGGGGTCAGTGGCATGAATCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341435.9
ENST00000429845.6
ENST00000435750.1
ENST00000491627.1
CDS TCA 90 bp ACCATAGGAGGCCTGGAAGCCTTCAGGGGGCAGGTCTGCGCTTTCTaGAAGTTCACTTTTCAGGCTGGCTGCTCCACTGCTGCTGCTACT +
Preference number: 5 (lower is better)
Translates to: TIGGLEAFRGQVCAF*KFTFQAGCSTAAAT
Trigger: AGTAGCAGCAGCAGTGGAGCAGCCAGCCTGAAAAGTGAACTTTCAGAAAGCGCAGACCTGCCCCCTGAAGGCTTCCAGGCCTCCTATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295720.10
ENST00000383770.4
ENST00000383771.8
ENST00000429845.6
ENST00000460447.1
ENST00000498182.5
ENST00000574215.5
CDS-3UTR CAA 90 bp TCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATAGCGGCACCACCTGGTGGGCATaGGTGTCATTGAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: SFPHPLAAPNPWASCNSGTTWWA*VSLSTS
Trigger: GCTGGTGCTCAATGACACCAATGCCCACCAGGTGGT...GCCGCTATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CAA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAAGGCCCCATGGCATCTaGGTCTTTTCCACACCCTCT +
Preference number: 5 (lower is better)
Translates to: ERSPAGPMASWSFPHPLARPHGI*VFSTPS
Trigger: AGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCT...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp TCACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCTTCGGCCTGCAGCATTaGCACTGGACAGGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: SRFCRLYRNHDGICFLGGFGLQH*HWTGFQ
Trigger: TTGGAAGCCTGTCCAGTGCAAATGCTGCAGGCCGAA...GCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CAA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCATGGGCATTGGTGTCATaGAGCACCAGCTCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: ERSPAGPMASWSFPHPLAWALVS*STSSVR
Trigger: CCTCACTGAGCTGGTGCTCAATGACACCAATGCCCA...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS CCA 90 bp CTTCAGGGGGCAGGTCTGCGCTTTCTGAAAGTTCACTTTTCAGGCTaGCTGCTCCACTGCTGCTGCTACTCAAACTTGCCTTCTCAAAGG +
Preference number: 5 (lower is better)
Translates to: LQGAGLRFLKVHFSG*LLHCCCYSNLPSQR
Trigger: CCTTTGAGAAGGCAAGTTTGAGTAGCAGCAGCAGTGGAGCAGCCAGCCTGAAAAGTGAACTTTCAGAAAGCGCAGACCTGCCCCCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295720.10
ENST00000383770.4
ENST00000383771.8
ENST00000429845.6
ENST00000460447.1
ENST00000498182.5
ENST00000574215.5
CDS CCA 90 bp TGGGACTGCCACCCTGTCACTAACTCAGCCTCTATTTCCTTAATGTaGGCCCTGAGCATGTGGGGTGGCACTTTCAGAAGCAGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: WDCHPVTNSASISLM*ALSMWGGTFRSRSR
Trigger: TCTTGACCTGCTTCTGAAAGTGCCACCCCACATGCTCAGGGCCCACATTAAGGAAATAGAGGCTGAGTTAGTGACAGGGTGGCAGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
ENST00000574215.5
CDS-3UTR CAA 90 bp TGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCGTGACGGTGTTCCGGTaGGCTTCCATAAAATACCTT +
Preference number: 5 (lower is better)
Translates to: CRPHGILVFSTPSSSTQSVTVFR*ASIKYL
Trigger: AAGGTATTTTATGGAAGCCAACCGGAACACCGTCAC...GGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp GCTCACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGCGGCCAGCTGCACCGTaGGTTTTCCAATCAAATCCT +
Preference number: 5 (lower is better)
Translates to: AHGSAGCTGTMMAFASWERPAAP*VFQSNP
Trigger: AGGATTTGATTGGAAAACCAACGGTGCAGCTGGCCG...CTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CAA 90 bp CATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCGTCATGTTGACCAGCTaGTCCACAGTGTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: HGILVFSTPSSSTQSLGIVMLTS*STVCCS
Trigger: AGAGCAGCACACTGTGGACAAGCTGGTCAACATGAC...GATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CAA 90 bp GTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCAGCACAGGATTCGGCCTGCAGCATTaGCACTGGACAGGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: VLAMKPSSTAAVIYSSTGFGLQH*HWTGFQ
Trigger: TTGGAAGCCTGTCCAGTGCAAATGCTGCAGGCCGAA...TCCTGTGCTGGAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS GCA 90 bp AGGCATCCAGAGATTAAAGGGGGAGTACTTCCAGGAGCACAGATCTaGAGTGCATATGGGCAGGCAGAGAAAGGTCAAAGGGAACACAGC +
Preference number: 5 (lower is better)
Translates to: RHPEIKGGVLPGAQI*SAYGQAEKGQREHS
Trigger: GCTGTGTTCCCTTTGACCTTTCTCTGCCTGCCCATATGCACTGCAGATCTGTGCTCCTGGAAGTACTCCCCCTTTAATCTCTGGATGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS-3UTR CAA 90 bp TCACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCCCAATCTCCTTATCATaGTCCCTGCTGCTGTCACCT +
Preference number: 5 (lower is better)
Translates to: SRFCRLYRNHDGICFLGGPISLS*SLLLSP
Trigger: AGGTGACAGCAGCAGGGACAATGATAAGGAGATTGG...GCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CAA 90 bp TGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCGCTGGAAGCTGTTGTTaGCTTGATTGGACGTTCAAA +
Preference number: 5 (lower is better)
Translates to: CRPHGILVFSTPSSSTQSAGSCC*LDWTFK
Trigger: TTTGAACGTCCAATCAAGCAAACAACAGCTTCCAGC...GGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CAA 90 bp GGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAGGAGGAGCCAGCACGGTGACCCATTCTCTTaGATCTTTGACTGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: GRHQEASNDSRRQRRSQHGDPFS*IFDCSK
Trigger: CTTGCTGCAGTCAAAGATCAAAGAGAATGGGTCACC...GTGCTGGCTCCTCCTTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS TCA 90 bp TTCCTAGTGCCCAGGGCTTGCCATAAACTCTTCTCTCCCTGGATCTaGGAATCACTGTGCTGCTCCACAAGCAGATATGAAGAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: FLVPRACHKLFSPWI*ESLCCSTSRYEEPV
Trigger: GACTGGCTCTTCATATCTGCTTGTGGAGCAGCACAGTGATTCTCAGATCCAGGGAGAGAAGAGTTTATGGCAAGCCCTGGGCACTAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS CCA 90 bp TGTCCACCCGCCCTGATGGCGGGCTCAGACTTCGTCATGCTATTTTaGGCACTATCGAAGTTAATGGCTGGAAGCTGTTGTTTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: CPPALMAGSDFVMLF*ALSKLMAGSCCLLD
Trigger: ATCAAGCAAACAACAGCTTCCAGCCATTAACTTCGATAGTGCCCAAAATAGCATGACGAAGTCTGAGCCCGCCATCAGGGCGGGTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341435.9
ENST00000429845.6
ENST00000435750.1
ENST00000491627.1
CDS-3UTR CAA 90 bp TCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCAGCACAGGACCGTGACGGTGTTCCGGTaGGCTTCCATAAAATACCTT +
Preference number: 5 (lower is better)
Translates to: SGNEALKYRSCHILQHRTVTVFR*ASIKYL
Trigger: AAGGTATTTTATGGAAGCCAACCGGAACACCGTCAC...GGTCCTGTGCTGGAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp TCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCAGCACAGGACCAGTGAAGTCCCTTGTTaGGGATTGTCTTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SGNEALKYRSCHILQHRTSEVPC*GLSFSS
Trigger: GGAGGAGAAAGACAATCCCAAACAAGGGACTTCACT...GGTCCTGTGCTGGAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp GGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAATGGGCATTGGTGTCATaGAGCACCAGCTCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: GICFLGGIRKLPMIAEGKWALVS*STSSVR
Trigger: CCTCACTGAGCTGGTGCTCAATGACACCAATGCCCA...TTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CAA 90 bp AGAAAGAAGAGAGGTTTAATTGGCTCACGGTTCTGCAGGCTGTACAGGAACCATACCACCTGGTGGGCATaGGTGTCATTGAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: RKKRGLIGSRFCRLYRNHTTWWA*VSLSTS
Trigger: GCTGGTGCTCAATGACACCAATGCCCACCAGGTGGT...ATGGTTCCTGTACAGCCTGCAGAACCGTGAGCCAATTAAACCTCTCTTCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS GCA 90 bp GGTCTGCGCTTTCTGAAAGTTCACTTTTCAGGCTGGCTGCTCCACTaGTGCTGCTACTCAAACTTGCCTTCTCAAAGGTCTCGTGAGATA +
Preference number: 5 (lower is better)
Translates to: GLRFLKVHFSGWLLH*CCYSNLPSQRSREI
Trigger: TATCTCACGAGACCTTTGAGAAGGCAAGTTTGAGTAGCAGCAGCAGTGGAGCAGCCAGCCTGAAAAGTGAACTTTCAGAAAGCGCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295720.10
ENST00000383770.4
ENST00000383771.8
ENST00000429845.6
ENST00000460447.1
ENST00000498182.5
ENST00000574215.5
CDS-3UTR CAA 90 bp TCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATAGCGGCTTCCATAAAATACCTTaGTGTGCGTCTTCGTTCCCG +
Preference number: 5 (lower is better)
Translates to: SFPHPLAAPNPWASCNSGFHKIP*CASSFP
Trigger: CGGGAACGAAGACGCACACAAAGGTATTTTATGGAA...GCCGCTATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp GTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCAGCACAGGAGTGACGGTGTTCCGGTaGGCTTCCATAAAATACCTT +
Preference number: 5 (lower is better)
Translates to: VLAMKPSSTAAVIYSSTGVTVFR*ASIKYL
Trigger: AAGGTATTTTATGGAAGCCAACCGGAACACCGTCAC...TCCTGTGCTGGAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp TCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCCAGCACAGGACCACCCTTCTTTTCAAATaGTGGTGCAAAGCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: SGNEALKYRSCHILQHRTTLLFK*WCKAGG
Trigger: TCCTCCAGCTTTGCACCACAATTTGAAAAGAAGGGT...GGTCCTGTGCTGGAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATAGGCCCCATGGCATCTaGGTCTTTTCCACACCCTCT +
Preference number: 5 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYRPHGI*VFSTPS
Trigger: AGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCT...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp GGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAGTCATGTTGACCAGCTaGTCCACAGTGTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GICFLGGIRKLPMIAEGKVMLTS*STVCCS
Trigger: AGAGCAGCACACTGTGGACAAGCTGGTCAACATGAC...TTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CAA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCATCAGTAACGGTTACTTaGTCCTTATCCCCCAACATA +
Preference number: 5 (lower is better)
Translates to: RSPAGPMASWSFPHPLAASVTVT*SLSPNI
Trigger: TATGTTGGGGGATAAGGACAAAGTAACCGTTACTGA...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS TCA 90 bp CCACAAAAATGGCTGTGTCCCTGCAATAACACTTACATGTCATGTTaGCCAGCTTGTCCACAGTGTGCTGCTCTTCTCCATAGCCGAGGT +
Preference number: 5 (lower is better)
Translates to: PQKWLCPCNNTYMSC*PACPQCAALLHSRG
Trigger: ACCTCGGCTATGGAGAAGAGCAGCACACTGTGGACAAGCTGGTCAACATGACATGTAAGTGTTATTGCAGGGACACAGCCATTTTTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS GCA 90 bp CGCTTTCTGAAAGTTCACTTTTCAGGCTGGCTGCTCCACTGCTGCTaGTACTCAAACTTGCCTTCTCAAAGGTCTCGTGAGATAGAACAG +
Preference number: 5 (lower is better)
Translates to: RFLKVHFSGWLLHCC*YSNLPSQRSREIEQ
Trigger: CTGTTCTATCTCACGAGACCTTTGAGAAGGCAAGTTTGAGTAGCAGCAGCAGTGGAGCAGCCAGCCTGAAAAGTGAACTTTCAGAAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295720.10
ENST00000383770.4
ENST00000383771.8
ENST00000429845.6
ENST00000460447.1
ENST00000498182.5
ENST00000574215.5
CDS GCA 90 bp CTGCGCTTTCTGAAAGTTCACTTTTCAGGCTGGCTGCTCCACTGCTaGTGCTACTCAAACTTGCCTTCTCAAAGGTCTCGTGAGATAGAA +
Preference number: 5 (lower is better)
Translates to: LRFLKVHFSGWLLHC*CYSNLPSQRSREIE
Trigger: TTCTATCTCACGAGACCTTTGAGAAGGCAAGTTTGAGTAGCAGCAGCAGTGGAGCAGCCAGCCTGAAAAGTGAACTTTCAGAAAGCGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295720.10
ENST00000383770.4
ENST00000383771.8
ENST00000429845.6
ENST00000460447.1
ENST00000498182.5
ENST00000574215.5
CDS-3UTR CAA 90 bp GGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAGATGGCATTTGCTTCTaGGGAGGCATCAGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: GICFLGGIRKLPMIAEGKDGICF*GGIRKL
Trigger: AAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATC...TTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CAA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCATCAGCATTTTCCAGGTaGAAGTTATCATCTGACAGG +
Preference number: 5 (lower is better)
Translates to: ERSPAGPMASWSFPHPLASAFSR*KLSSDR
Trigger: CCTGTCAGATGATAACTTCAACCTGGAAAATGCTGA...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp TCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATGGTGACCCATTCTCTTaGATCTTTGACTGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: SWSFPHPLAAPNPWASCNGDPFS*IFDCSK
Trigger: CTTGCTGCAGTCAAAGATCAAAGAGAATGGGTCACC...ATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CAA 90 bp GCTCACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGAAATTTACTAATGTCTaGTGGGCTCCACTTGTGGTG +
Preference number: 5 (lower is better)
Translates to: AHGSAGCTGTMMAFASWEKFTNV*WAPLVV
Trigger: CACCACAAGTGGAGCCCACAAGACATTAGTAAATTT...CTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CAA 90 bp GCTCACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGACAATCCTCTTCTCCTaGTGTAAGTATCGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: AHGSAGCTGTMMAFASWETILFS*CKYRRA
Trigger: AGCTCTTCGATACTTACACAAGGAGAAGAGGATTGT...CTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CAA 90 bp AAGATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCGATGGCATTTGCTTCTaGGGAGGCATCAGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: KMNFAAFSPSSTLVALTSDGICF*GGIRKL
Trigger: AAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATC...GGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295720.10
ENST00000383771.8
CDS-3UTR CAA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATGATGGCATTTGCTTCTaGGGAGGCATCAGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYDGICF*GGIRKL
Trigger: AAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATC...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295720.10
ENST00000383771.8
CDS-3UTR CAA 90 bp GAAAGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCACTGAAGAGGGATTTCTaGAATCTCTCTATAACCCTT +
Preference number: 5 (lower is better)
Translates to: ERSPAGPMASWSFPHPLALKRDF*NLSITL
Trigger: AAGGGTTATAGAGAGATTCAAGAAATCCCTCTTCAG...TGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp AAGATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCCCAATCTCCTTATCATaGTCCCTGCTGCTGTCACCT +
Preference number: 5 (lower is better)
Translates to: KMNFAAFSPSSTLVALTSPISLS*SLLLSP
Trigger: AGGTGACAGCAGCAGGGACAATGATAAGGAGATTGG...GGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CAA 90 bp TCACGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCCTTCGTCATGCTATTTaGGGCACTATCGAAGTTAAT +
Preference number: 5 (lower is better)
Translates to: SRFCRLYRNHDGICFLGGLRHAI*GTIEVN
Trigger: ATTAACTTCGATAGTGCCCAAAATAGCATGACGAAG...GCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CAA 90 bp AGAAGTCCTGCAGGCCCCATGGCATCTTGGTCTTTTCCACACCCTCTAGCAGCAAATATTTTCAGCAATTaGCTTCAGTTCATCCTCCAC +
Preference number: 5 (lower is better)
Translates to: RSPAGPMASWSFPHPLAANIFSN*LQFILH
Trigger: GTGGAGGATGAACTGAAGCAAATTGCTGAAAATATT...TGCTGCTAGAGGGTGTGGAAAAGACCAAGATGCCATGGGGCCTGCAGGACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS CCA 90 bp GACTGTGTCTCACCCCATGTACCACTGAATCGGGGTCTGTTTCCTTaGATGGTTTCAAAGGCTGCAAATAAATGGAGAACAAGACTAACG +
Preference number: 5 (lower is better)
Translates to: DCVSPHVPLNRGLFP*MVSKAANKWRTRLT
Trigger: CGTTAGTCTTGTTCTCCATTTATTTGCAGCCTTTGAAACCATCCAAGGAAACAGACCCCGATTCAGTGGTACATGGGGTGAGACACAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474938.1
CDS-3UTR CAA 90 bp CTGTCTACACTGTATCACAGTTCAAGACCACTAGCACCCAAGTGGTTAAGCGAGTTCCATAAAATACCTTaGTGTGCGTCTTCGTTCCCG +
Preference number: 5 (lower is better)
Translates to: LSTLYHSSRPLAPKWLSEFHKIP*CASSFP
Trigger: CGGGAACGAAGACGCACACAAAGGTATTTTATGGAA...CTCGCTTAACCACTTGGGTGCTAGTGGTCTTGAACTGTGATACAGTGTAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295720.10
CDS-3UTR CAA 90 bp CAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGCCAGTGAAGTCCCTTGTTaGGGATTGTCTTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QHTGSSDILYIMCSGNEASEVPC*GLSFSS
Trigger: GGAGGAGAAAGACAATCCCAAACAAGGGACTTCACT...GGCTTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGCAGCAAAGCTGGTCTaGGTCTTGATCCTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSAAKLV*VLILFL
Trigger: GAGGAACAGGATCAAGACCAAGACCAGCTTTGCTGC...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp TATATAATGTGTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCGCAGCAAAGCTGGTCTaGGTCTTGATCCTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: YIMCSGNEALKYRSCHILAAKLV*VLILFL
Trigger: GAGGAACAGGATCAAGACCAAGACCAGCTTTGCTGC...GAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAACACATTATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp ATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTTCTGCTGTGAAAAAGTaGGGCTCAATCGGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: MNFAAFSPSSTLVALTSCSAVKK*GSIGSG
Trigger: TCCAGAACCGATTGAGCCCAACTTTTTCACAGCAGA...ACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp TCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATGCTGAAGTCCAGAACTaGAACTTCACTGAGAAAATC +
Preference number: 5 (lower is better)
Translates to: SWSFPHPLAAPNPWASCNAEVQN*NFTEKI
Trigger: GATTTTCTCAGTGAAGTTCAAGTTCTGGACTTCAGC...ATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp TCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATCAGGAAAAATATATGTCATGTaGACCAGCTTGTCCACAGTG +
Preference number: 5 (lower is better)
Translates to: SAGCTGTMMAFASWEASGKIYVM*TSLSTV
Trigger: CACTGTGGACAAGCTGGTCAACATGACATATATTTT...TCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CAA 90 bp CGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATCAATATTTTCAGCAATTaGCTTCAGTTCATCCTCCAC +
Preference number: 5 (lower is better)
Translates to: RFCRLYRNHDGICFLGGINIFSN*LQFILH
Trigger: GTGGAGGATGAACTGAAGCAAATTGCTGAAAATATT...GATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CAA 90 bp TCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATAGCGGCGCTGGGTTATGTAAATaGACCTCTTTCATTGCTAAA +
Preference number: 5 (lower is better)
Translates to: SFPHPLAAPNPWASCNSGAGLCK*TSFIAK
Trigger: TTTAGCAATGAAAGAGGTCAATTTACATAACCCAGC...GCCGCTATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS TCA 90 bp CAGTATTTAGGGCAAATGTTGACTGTGTCTCACCCCATGTACCACTaGATCGGGGTCTGTTTCCTTGGATGGTTTCAAAGGCTGCAAATA +
Preference number: 5 (lower is better)
Translates to: QYLGQMLTVSHPMYH*IGVCFLGWFQRLQI
Trigger: TATTTGCAGCCTTTGAAACCATCCAAGGAAACAGACCCCGATTCAGTGGTACATGGGGTGAGACACAGTCAACATTTGCCCTAAATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474938.1
CDS TCA 90 bp GCATCAGGAGTGAGGCACCTCATCCACTTTGTCCCCACTCCACTCTaGAAGGCCAGATGGAAAGAATTAGAAGGATACCTTATTCAATTA +
Preference number: 5 (lower is better)
Translates to: ASGVRHLIHFVPTPL*KARWKELEGYLIQL
Trigger: TAATTGAATAAGGTATCCTTCTAATTCTTTCCATCTGGCCTTTCAGAGTGGAGTGGGGACAAAGTGGATGAGGTGCCTCACTCCTGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498182.5
CDS CCA 90 bp GCACCTGCTGATGGTGTCTGTTACTTTTTCAGAGTAGATACCTTCTaGGACTGGTTCATATACCGCCTCCACTATTTTTGTAGCCAAGGA +
Preference number: 5 (lower is better)
Translates to: APADGVCYFFRVDTF*DWFIYRLHYFCSQG
Trigger: TCCTTGGCTACAAAAATAGTGGAGGCGGTATATGAACCAGTCCCAGAAGGTATCTACTCTGAAAAAGTAACAGACACCATCAGCAGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000295720.10
ENST00000383770.4
ENST00000383771.8
ENST00000429845.6
ENST00000574215.5
CDS CCA 90 bp CTTCTGATAAATGAAGCTGCTGGATTCGGCCTGCAGCATTTGCACTaGACAGGCTTCCAATGGAGGAGTGATCAGAAACAAAATTTCTGT +
Preference number: 5 (lower is better)
Translates to: LLINEAAGFGLQHLH*TGFQWRSDQKQNFC
Trigger: ACAGAAATTTTGTTTCTGATCACTCCTCCATTGGAAGCCTGTCCAGTGCAAATGCTGCAGGCCGAATCCAGCAGCTTCATTTATCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341435.9
ENST00000429845.6
CDS CCA 90 bp AGGGTTGACAAAGATCCACAATCTCAGGCCAGGCTGGTAGGTTTGTaGATTCTAATTACACATGACTTAACCGCAAAGGCTCTGAACTTC +
Preference number: 5 (lower is better)
Translates to: RVDKDPQSQARLVGL*ILITHDLTAKALNF
Trigger: GAAGTTCAGAGCCTTTGCGGTTAAGTCATGTGTAATTAGAATCCACAAACCTACCAGCCTGGCCTGAGATTGTGGATCTTTGTCAACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS-3UTR CAA 90 bp ATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTACCCTTCTTTTCAAATaGTGGTGCAAAGCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: MNFAAFSPSSTLVALTSCTLLFK*WCKAGG
Trigger: TCCTCCAGCTTTGCACCACAATTTGAAAAGAAGGGT...ACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp TCTGCAGGCTGTACAGGAACCATGATGGCATTTGCTTCTTGGGAGGCATCAGGACTTGCTGTTTATCAGTaGATTTTTCTGTGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SAGCTGTMMAFASWEASGLAVYQ*IFLWSS
Trigger: TGAAGACCACAGAAAAATCAACTGATAAACAGCAAG...TCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CAA 90 bp AAGAAGAGAGGTTTAATTGGCTCACGGTTCTGCAGGCTGTACAGGAACCATGATGAAGCTGTTGTTTGCTaGATTGGACGTTCAAAAGGC +
Preference number: 5 (lower is better)
Translates to: KKRGLIGSRFCRLYRNHDEAVVC*IGRSKG
Trigger: GCCTTTTGAACGTCCAATCAAGCAAACAACAGCTTC...ATCATGGTTCCTGTACAGCCTGCAGAACCGTGAGCCAATTAAACCTCTCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CAA 90 bp ATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAGGAGCTGGAAGCTGTTGTTaGCTTGATTGGACGTTCAAA +
Preference number: 5 (lower is better)
Translates to: ICFLGGIRKLPMIAEGKGAGSCC*LDWTFK
Trigger: TTTGAACGTCCAATCAAGCAAACAACAGCTTCCAGC...TCCTTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CAA 90 bp TCTTGGTCTTTTCCACACCCTCTAGCAGCACCCAATCCTTGGGCATCTTGCAATAAAATATATGTCATGTaGACCAGCTTGTCCACAGTG +
Preference number: 5 (lower is better)
Translates to: SWSFPHPLAAPNPWASCNKIYVM*TSLSTV
Trigger: CACTGTGGACAAGCTGGTCAACATGACATATATTTT...ATTGCAAGATGCCCAAGGATTGGGTGCTGCTAGAGGGTGTGGAAAAGACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS TCA 90 bp GGCTGTTTCCACCGGATGAACGATGTAATAAATGGTAATCTGCTGTaGAAAAGTTGGGCTCAATCGGTTCTGGAGATCCCTGAGATAACT +
Preference number: 5 (lower is better)
Translates to: GCFHRMNDVINGNLL*KSWAQSVLEIPEIT
Trigger: AGTTATCTCAGGGATCTCCAGAACCGATTGAGCCCAACTTTTTCACAGCAGATTACCATTTATTACATCGTTCATCCGGTGGAAACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295720.10
ENST00000383770.4
ENST00000383771.8
ENST00000429845.6
CDS TCA 90 bp AAAGTATTTTCTTGTATTTCCCTAGGGCTCAAGTCTTCTGATAAATaGAGCTGCTGGATTCGGCCTGCAGCATTTGCACTGGACAGGCTT +
Preference number: 5 (lower is better)
Translates to: KVFSCISLGLKSSDK*SCWIRPAAFALDRL
Trigger: AAGCCTGTCCAGTGCAAATGCTGCAGGCCGAATCCAGCAGCTTCATTTATCAGAAGACTTGAGCCCTAGGGAAATACAAGAAAATACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341435.9
ENST00000429845.6
CDS GCA 90 bp TCAACTTATAAAGAAGAGAGGGAAGGCCAGCAAATGAGAGGAACCTaGACGTTTCCTCAGCTGAGGAAAATAGTCATCCTCAAAGAGACT +
Preference number: 5 (lower is better)
Translates to: STYKEEREGQQMRGT*TFPQLRKIVILKET
Trigger: AGTCTCTTTGAGGATGACTATTTTCCTCAGCTGAGGAAACGTGCAGGTTCCTCTCATTTGCTGGCCTTCCCTCTCTTCTTTATAAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS CCA 90 bp GCTGATGGTGTCTGTTACTTTTTCAGAGTAGATACCTTCTGGGACTaGTTCATATACCGCCTCCACTATTTTTGTAGCCAAGGACAGCAT +
Preference number: 5 (lower is better)
Translates to: ADGVCYFFRVDTFWD*FIYRLHYFCSQGQH
Trigger: ATGCTGTCCTTGGCTACAAAAATAGTGGAGGCGGTATATGAACCAGTCCCAGAAGGTATCTACTCTGAAAAAGTAACAGACACCATCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000295720.10
ENST00000383770.4
ENST00000383771.8
ENST00000429845.6
ENST00000574215.5
CDS-3UTR CAA 90 bp ACCCCCAGAGGCTGTGCAAGGTTACAAATACTGTCTACACTGTATCACAGTTCATCAGCATTTTCCAGGTaGAAGTTATCATCTGACAGG +
Preference number: 5 (lower is better)
Translates to: TPRGCARLQILSTLYHSSSAFSR*KLSSDR
Trigger: CCTGTCAGATGATAACTTCAACCTGGAAAATGCTGA...TGAACTGTGATACAGTGTAGACAGTATTTGTAACCTTGCACAGCCTCTGGGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295720.10
CDS-3UTR CAA 90 bp CAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGCCTCAGCATTTTCCAGGTaGAAGTTATCATCTGACAGG +
Preference number: 5 (lower is better)
Translates to: QHTGSSDILYIMCSGNEASAFSR*KLSSDR
Trigger: CCTGTCAGATGATAACTTCAACCTGGAAAATGCTGA...GGCTTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTAGTGAAGTCCCTTGTTaGGGATTGTCTTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSSEVPC*GLSFSS
Trigger: GGAGGAGAAAGACAATCCCAAACAAGGGACTTCACT...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp TATATAATGTGTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCTCTGCTGTGAAAAAGTaGGGCTCAATCGGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: YIMCSGNEALKYRSCHILSAVKK*GSIGSG
Trigger: TCCAGAACCGATTGAGCCCAACTTTTTCACAGCAGA...GAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAACACATTATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp ATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTTCTGCTGTGAAAAAGTaGGGCTCAATCGGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: IFSQQHTGSSDILYIMCSSAVKK*GSIGSG
Trigger: TCCAGAACCGATTGAGCCCAACTTTTTCACAGCAGA...AGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp AAGATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCGCTGAAGTCCAGAACTaGAACTTCACTGAGAAAATC +
Preference number: 5 (lower is better)
Translates to: KMNFAAFSPSSTLVALTSAEVQN*NFTEKI
Trigger: GATTTTCTCAGTGAAGTTCAAGTTCTGGACTTCAGC...GGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp CAGCACACTGGTAGCTCTGACATCCTGTATATAATGTGTTCTGGCAATGAAGCCAAATTTACTAATGTCTaGTGGGCTCCACTTGTGGTG +
Preference number: 5 (lower is better)
Translates to: QHTGSSDILYIMCSGNEAKFTNV*WAPLVV
Trigger: CACCACAAGTGGAGCCCACAAGACATTAGTAAATTT...GGCTTCATTGCCAGAACACATTATATACAGGATGTCAGAGCTACCAGTGTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CAA 90 bp GATGGCATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCGCTGGGTTATGTAAATaGACCTCTTTCATTGCTAAA +
Preference number: 5 (lower is better)
Translates to: DGICFLGGIRKLPMIAEGAGLCK*TSFIAK
Trigger: TTTAGCAATGAAAGAGGTCAATTTACATAACCCAGC...GCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CAA 90 bp ATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTACAATCCTCTTCTCCTaGTGTAAGTATCGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: MNFAAFSPSSTLVALTSCTILFS*CKYRRA
Trigger: AGCTCTTCGATACTTACACAAGGAGAAGAGGATTGT...ACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CAA 90 bp ATTTGCTTCTTGGGAGGCATCAGGAAGCTTCCAATGATAGCAGAAGGCAAAGGATCCCCCAACATAATGTaGTTTGGTGTCAGATCTCTA +
Preference number: 5 (lower is better)
Translates to: ICFLGGIRKLPMIAEGKGSPNIM*FGVRSL
Trigger: TAGAGATCTGACACCAAACAACATTATGTTGGGGGA...TCCTTTGCCTTCTGCTATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CAA 90 bp ATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTTCCCCCAACATAATGTaGTTTGGTGTCAGATCTCTA +
Preference number: 5 (lower is better)
Translates to: MNFAAFSPSSTLVALTSCSPNIM*FGVRSL
Trigger: TAGAGATCTGACACCAAACAACATTATGTTGGGGGA...ACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CAA 90 bp AGAAAGAAGAGAGGTTTAATTGGCTCACGGTTCTGCAGGCTGTACAGGAACCATTCAGTAACGGTTACTTaGTCCTTATCCCCCAACATA +
Preference number: 5 (lower is better)
Translates to: RKKRGLIGSRFCRLYRNHSVTVT*SLSPNI
Trigger: TATGTTGGGGGATAAGGACAAAGTAACCGTTACTGA...ATGGTTCCTGTACAGCCTGCAGAACCGTGAGCCAATTAAACCTCTCTTCTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS-3UTR CAA 90 bp TATATAATGTGTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCACCCTTCTTTTCAAATaGTGGTGCAAAGCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: YIMCSGNEALKYRSCHILTLLFK*WCKAGG
Trigger: TCCTCCAGCTTTGCACCACAATTTGAAAAGAAGGGT...GAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAACACATTATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp ATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTCTGAAGAGGGATTTCTaGAATCTCTCTATAACCCTT +
Preference number: 5 (lower is better)
Translates to: MNFAAFSPSSTLVALTSCLKRDF*NLSITL
Trigger: AAGGGTTATAGAGAGATTCAAGAAATCCCTCTTCAG...ACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp AAGATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCCTGAAGAGGGATTTCTaGAATCTCTCTATAACCCTT +
Preference number: 5 (lower is better)
Translates to: KMNFAAFSPSSTLVALTSLKRDF*NLSITL
Trigger: AAGGGTTATAGAGAGATTCAAGAAATCCCTCTTCAG...GGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp TATATAATGTGTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCGAAGCTGTTGTTTGCTaGATTGGACGTTCAAAAGGC +
Preference number: 5 (lower is better)
Translates to: YIMCSGNEALKYRSCHILEAVVC*IGRSKG
Trigger: GCCTTTTGAACGTCCAATCAAGCAAACAACAGCTTC...GAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAACACATTATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS-3UTR CAA 90 bp GAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTATCTTCGTCATGCTATTTaGGGCACTATCGAAGTTAAT +
Preference number: 5 (lower is better)
Translates to: EFCSIFSQQHTGSSDILYLRHAI*GTIEVN
Trigger: ATTAACTTCGATAGTGCCCAAAATAGCATGACGAAG...ATACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS CCA 90 bp TTGTCCTTATCCCCCAACATAATGTTGTTTGGTGTCAGATCTCTATaGACAATCCTCTTCTCCTTGTGTAAGTATCGAAGAGCTAAGCAC +
Preference number: 5 (lower is better)
Translates to: LSLSPNIMLFGVRSL*TILFSLCKYRRAKH
Trigger: GTGCTTAGCTCTTCGATACTTACACAAGGAGAAGAGGATTGTCCATAGAGATCTGACACCAAACAACATTATGTTGGGGGATAAGGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341435.9
ENST00000424275.1
ENST00000429845.6
ENST00000435584.5
ENST00000474938.1
ENST00000574215.5
CDS-3UTR CAA 90 bp TATATAATGTGTTCTGGCAATGAAGCCCTCAAGTACCGCAGCTGTCATATACTCGCTGAAGTCCAGAACTaGAACTTCACTGAGAAAATC +
Preference number: 5 (lower is better)
Translates to: YIMCSGNEALKYRSCHILAEVQN*NFTEKI
Trigger: GATTTTCTCAGTGAAGTTCAAGTTCTGGACTTCAGC...GAGTATATGACAGCTGCGGTACTTGAGGGCTTCATTGCCAGAACACATTATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
CDS-3UTR CAA 90 bp ATGAATTTTGCAGCATTTTCTCCCAGCAGCACACTGGTAGCTCTGACATCCTGTCTTGCTGTTTATCAGTaGATTTTTCTGTGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: MNFAAFSPSSTLVALTSCLAVYQ*IFLWSS
Trigger: TGAAGACCACAGAAAAATCAACTGATAAACAGCAAG...ACAGGATGTCAGAGCTACCAGTGTGCTGCTGGGAGAAAATGCTGCAAAATTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS TCA 90 bp GAGTATTCACATTGTGTCAAGTGTAGCATACACATGTGTATTATATaGATGCCACTGTCTCCACTGATGCAAGTTGACAAGTCTGGGAAT +
Preference number: 5 (lower is better)
Translates to: EYSHCVKCSIHMCII*MPLSPLMQVDKSGN
Trigger: ATTCCCAGACTTGTCAACTTGCATCAGTGGAGACAGTGGCATTCATATAATACACATGTGTATGCTACACTTGACACAATGTGAATACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS GCA 90 bp AGTAGACATCATATAAGCTTGCAGCTTACAAGGTACATGTTAGCCTaGCACAGTTTCTTTGCATCTTCTCATGAAACCACAAGAATACAG +
Preference number: 5 (lower is better)
Translates to: SRHHISLQLTRYMLA*HSFFASSHETTRIQ
Trigger: CTGTATTCTTGTGGTTTCATGAGAAGATGCAAAGAAACTGTGGCAGGCTAACATGTACCTTGTAAGCTGCAAGCTTATATGATGTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR CAA 90 bp ATTGAAGAGAAGGAGTTTAAGCCCAGTGAGAATCTAGCAGATTTTCATCATAATGTTAAATCTGACAGTTaGACAGTTACCCCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: IEEKEFKPSENLADFHHNVKSDS*TVTPRG
Trigger: GCCTCTGGGGGTAACTGTCAAACTGTCAGATTTAAC...ATTATGATGAAAATCTGCTAGATTCTCACTGGGCTTAAACTCCTTCTCTTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295720.10
CDS-3UTR CAA 90 bp CTTACTGTTAAGAGGATAAGTAGACATCATATAAGCTTGCAGCTTACAAGGTACCCTGCCACAGTTTCTTaGCATCTTCTCATGAAACCA +
Preference number: 5 (lower is better)
Translates to: LTVKRISRHHISLQLTRYPATVS*HLLMKP
Trigger: TGGTTTCATGAGAAGATGCAAAGAAACTGTGGCAGG...GTACCTTGTAAGCTGCAAGCTTATATGATGTCTACTTATCCTCTTAACAGTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR CAA 90 bp CTTACTGTTAAGAGGATAAGTAGACATCATATAAGCTTGCAGCTTACAAGGTACACAATCCTCTTCTCCTaGTGTAAGTATCGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: LTVKRISRHHISLQLTRYTILFS*CKYRRA
Trigger: AGCTCTTCGATACTTACACAAGGAGAAGAGGATTGT...GTACCTTGTAAGCTGCAAGCTTATATGATGTCTACTTATCCTCTTAACAGTAAG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR CAA 90 bp CTTACTGTTAAGAGGATAAGTAGACATCATATAAGCTTGCAGCTTACAAGGTACTCCCCCAACATAATGTaGTTTGGTGTCAGATCTCTA +
Preference number: 5 (lower is better)
Translates to: LTVKRISRHHISLQLTRYSPNIM*FGVRSL
Trigger: TAGAGATCTGACACCAAACAACATTATGTTGGGGGA...GTACCTTGTAAGCTGCAAGCTTATATGATGTCTACTTATCCTCTTAACAGTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR CAA 90 bp CTTACTGTTAAGAGGATAAGTAGACATCATATAAGCTTGCAGCTTACAAGGTACTCAGTAACGGTTACTTaGTCCTTATCCCCCAACATA +
Preference number: 5 (lower is better)
Translates to: LTVKRISRHHISLQLTRYSVTVT*SLSPNI
Trigger: TATGTTGGGGGATAAGGACAAAGTAACCGTTACTGA...GTACCTTGTAAGCTGCAAGCTTATATGATGTCTACTTATCCTCTTAACAGTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR CAA 90 bp AGAAAATTATTCTTCTCTCAGAAAGTAACGAGTAGGTCAGCCTTACTGTTAAGACCTGCCACAGTTTCTTaGCATCTTCTCATGAAACCA +
Preference number: 5 (lower is better)
Translates to: RKLFFSQKVTSRSALLLRPATVS*HLLMKP
Trigger: TGGTTTCATGAGAAGATGCAAAGAAACTGTGGCAGG...TCTTAACAGTAAGGCTGACCTACTCGTTACTTTCTGAGAGAAGAATAATTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR CAA 90 bp AGAAAATTATTCTTCTCTCAGAAAGTAACGAGTAGGTCAGCCTTACTGTTAAGAACAATCCTCTTCTCCTaGTGTAAGTATCGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: RKLFFSQKVTSRSALLLRTILFS*CKYRRA
Trigger: AGCTCTTCGATACTTACACAAGGAGAAGAGGATTGT...TCTTAACAGTAAGGCTGACCTACTCGTTACTTTCTGAGAGAAGAATAATTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR CAA 90 bp AGAAAATTATTCTTCTCTCAGAAAGTAACGAGTAGGTCAGCCTTACTGTTAAGATCAGTAACGGTTACTTaGTCCTTATCCCCCAACATA +
Preference number: 5 (lower is better)
Translates to: RKLFFSQKVTSRSALLLRSVTVT*SLSPNI
Trigger: TATGTTGGGGGATAAGGACAAAGTAACCGTTACTGA...TCTTAACAGTAAGGCTGACCTACTCGTTACTTTCTGAGAGAAGAATAATTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS-3UTR CAA 90 bp CTTACTGTTAAGAGGATAAGTAGACATCATATAAGCTTGCAGCTTACAAGGTACAGACATCATATAAGCTaGCAGCTTACAAGGTACATG +
Preference number: 5 (lower is better)
Translates to: LTVKRISRHHISLQLTRYRHHIS*QLTRYM
Trigger: CATGTACCTTGTAAGCTGCAAGCTTATATGATGTCT...GTACCTTGTAAGCTGCAAGCTTATATGATGTCTACTTATCCTCTTAACAGTAAG
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS TCA 90 bp GTAAGTTCAGTTTTACCAAATTCCCTCAAGAGTCATTTTGTAATGTaGTGGCACAATATGGACCTTATTTGGCAAGTGACAGTATTTAGG +
Preference number: 5 (lower is better)
Translates to: VSSVLPNSLKSHFVM*WHNMDLIWQVTVFR
Trigger: CCTAAATACTGTCACTTGCCAAATAAGGTCCATATTGTGCCATCACATTACAAAATGACTCTTGAGGGAATTTGGTAAAACTGAACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474938.1
CDS-3UTR CAA 90 bp CTTACTGTTAAGAGGATAAGTAGACATCATATAAGCTTGCAGCTTACAAGGTACAATATTTTCAGCAATTaGCTTCAGTTCATCCTCCAC +
Preference number: 5 (lower is better)
Translates to: LTVKRISRHHISLQLTRYNIFSN*LQFILH
Trigger: GTGGAGGATGAACTGAAGCAAATTGCTGAAAATATT...GTACCTTGTAAGCTGCAAGCTTATATGATGTCTACTTATCCTCTTAACAGTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424275.1
CDS-3UTR CAA 90 bp AGAAAATTATTCTTCTCTCAGAAAGTAACGAGTAGGTCAGCCTTACTGTTAAGAGCTGGGTTATGTAAATaGACCTCTTTCATTGCTAAA +
Preference number: 5 (lower is better)
Translates to: RKLFFSQKVTSRSALLLRAGLCK*TSFIAK
Trigger: TTTAGCAATGAAAGAGGTCAATTTACATAACCCAGC...TCTTAACAGTAAGGCTGACCTACTCGTTACTTTCTGAGAGAAGAATAATTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435584.5
CDS TCA 72 bp TGGCTCCCGAGGCTTCGGGGCCGCTCCACAGGGACCTaGGGACGTCTCCCCGGAGACCCTGACTCAAGCTGC +
Preference number: 6 (lower is better)
Translates to: WLPRLRGRSTGT*GRLPGDPDSSC
Trigger: GCAGCTTGAGTCAGGGTCTCCGGGGAGACGTCCTCAGGTCCCTGTGGAGCGGCCCCGAAGCCTCGGGAGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS CAA 90 bp CCGCGCGGGAGGGACGGTCCCTCCTTCAGGCCAATCTCCTTATCATaGTCCCTGCTGCTGTCACCTGCTGCTGCAGACCGGGGGTCCCGT +
Preference number: 6 (lower is better)
Translates to: PRGRDGPSFRPISLS*SLLLSPAAADRGSR
Trigger: ACGGGACCCCCGGTCTGCAGCAGCAGGTGACAGCAGCAGGGACAATGATAAGGAGATTGGCCTGAAGGAGGGACCGTCCCTCCCGCGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435750.1
CDS CAA 90 bp TCGCGCGGGAGGGACGGTCCCTCCTTCAGGCCAATCTCCTTATCATaGTCCCTGCTGCTGTCACCTGCTGCTGCAGACCGGGGGTCCCGT +
Preference number: 6 (lower is better)
Translates to: SRGRDGPSFRPISLS*SLLLSPAAADRGSR
Trigger: ACGGGACCCCCGGTCTGCAGCAGCAGGTGACAGCAGCAGGGACAATGATAAGGAGATTGGCCTGAAGGAGGGACCGTCCCTCCCGCGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341435.9
CDS CAA 90 bp ACGCGCGGGAGGGACGGTCCCTCCTTCAGGCCAATCTCCTTATCATaGTCCCTGCTGCTGTCACCTGCTGCTGCAGACCGGGGGTCCCGT +
Preference number: 6 (lower is better)
Translates to: TRGRDGPSFRPISLS*SLLLSPAAADRGSR
Trigger: ACGGGACCCCCGGTCTGCAGCAGCAGGTGACAGCAGCAGGGACAATGATAAGGAGATTGGCCTGAAGGAGGGACCGTCCCTCCCGCGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429845.6
CDS GCA 72 bp CTCCTTATCATTGTCCCTGCTGCTGTCACCTGCTGCTaGAGACCGGGGGTCCCGTCCAGTCTCAGCCCGTCC +
Preference number: 6 (lower is better)
Translates to: LLIIVPAAVTCC*RPGVPSSLSPS
Trigger: GGACGGGCTGAGACTGGACGGGACCCCCGGTCTGCAGCAGCAGGTGACAGCAGCAGGGACAATGATAAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341435.9
ENST00000429845.6
ENST00000435750.1
CDS GCA 72 bp CCCGGTCCCCTCAACCTCAGGGACACCGCGGCCAGCTaGACCGTTGGTTTTCCAATCAAATCCTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: PGPLNLRDTAAS*TVGFPIKSSSR
Trigger: CCTGGAGGAGGATTTGATTGGAAAACCAACGGTGCAGCTGGCCGCGGTGTCCCTGAGGTTGAGGGGACCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435750.1
CDS TCA 72 bp CATGCCACTGACCCCGAGCTCTGTGTCCACCCGCCCTaGTGGCGGGCTCAGACTTCGTCATGCTATTTTGGG +
Preference number: 6 (lower is better)
Translates to: HATDPELCVHPP*WRAQTSSCYFG
Trigger: CCCAAAATAGCATGACGAAGTCTGAGCCCGCCATCAGGGCGGGTGGACACAGAGCTCGGGGTCAGTGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341435.9
ENST00000429845.6
ENST00000435750.1
ENST00000491627.1
CDS GCA 72 bp GTCCCTCCTTCAGGCCAATCTCCTTATCATTGTCCCTaGTGCTGTCACCTGCTGCTGCAGACCGGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: VPPSGQSPYHCP*CCHLLLQTGGP
Trigger: GGGACCCCCGGTCTGCAGCAGCAGGTGACAGCAGCAGGGACAATGATAAGGAGATTGGCCTGAAGGAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341435.9
ENST00000429845.6
ENST00000435750.1
CDS CAA 72 bp CTTACCCACCACAGCCGCATTCTCTACCTCTGCCTCTaGTCTAGTGAAGCTGGCTCCCGAGGCTTCGGGGCC +
Preference number: 6 (lower is better)
Translates to: LTHHSRILYLCL*SSEAGSRGFGA
Trigger: GGCCCCGAAGCCTCGGGAGCCAGCTTCACTAGACAAGAGGCAGAGGTAGAGAATGCGGCTGTGGTGGGTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS CAA 90 bp AGTGACTCACTTACCCACCACAGCCGCATTCTCTACCTCTGCCTCTaGTCTAGTGAAGCTGGCTCCCGAGGCTTCGGGGCCGCTCCACAG +
Preference number: 6 (lower is better)
Translates to: SDSLTHHSRILYLCL*SSEAGSRGFGAAPQ
Trigger: CTGTGGAGCGGCCCCGAAGCCTCGGGAGCCAGCTTCACTAGACAAGAGGCAGAGGTAGAGAATGCGGCTGTGGTGGGTAAGTGAGTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS CCA 72 bp CCTCAACCTCAGGGACACCGCGGCCAGCTGCACCGTTaGTTTTCCAATCAAATCCTCCTCCAGGCCACCAAC +
Preference number: 6 (lower is better)
Translates to: PQPQGHRGQLHR*FSNQILLQATN
Trigger: GTTGGTGGCCTGGAGGAGGATTTGATTGGAAAACCAACGGTGCAGCTGGCCGCGGTGTCCCTGAGGTTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435750.1
CDS TCA 72 bp GGCCTGGAAGCCTTCAGGGGGCAGGTCTGCGCTTTCTaGAAGTTCACTTTTCAGGCTGGCTGCTCCACTGCT +
Preference number: 6 (lower is better)
Translates to: GLEAFRGQVCAF*KFTFQAGCSTA
Trigger: AGCAGTGGAGCAGCCAGCCTGAAAAGTGAACTTTCAGAAAGCGCAGACCTGCCCCCTGAAGGCTTCCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295720.10
ENST00000383770.4
ENST00000383771.8
ENST00000429845.6
ENST00000460447.1
ENST00000498182.5
ENST00000574215.5
CDS TCA 72 bp CAGCAGGGCTGGGAAGAGCCTCCAACGGGAGAAGATTaGGTGACTAAGGAATACCTCACACTCACAGTCCAA +
Preference number: 6 (lower is better)
Translates to: QQGWEEPPTGED*VTKEYLTLTVQ
Trigger: TTGGACTGTGAGTGTGAGGTATTCCTTAGTCACTCAATCTTCTCCCGTTGGAGGCTCTTCCCAGCCCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS GCA 72 bp ACTCAAAGTCGCCATCTGATAAAGGATGCAGCCTACTaGCCAGACATCAGCCTTCTCCCCATACGGCTCACT +
Preference number: 6 (lower is better)
Translates to: TQSRHLIKDAAY*PDISLLPIRLT
Trigger: AGTGAGCCGTATGGGGAGAAGGCTGATGTCTGGGCAGTAGGCTGCATCCTTTATCAGATGGCGACTTTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295720.10
ENST00000383770.4
ENST00000383771.8
ENST00000429845.6
ENST00000574215.5
CDS CCA 72 bp CTCTATTTCCTTAATGTGGGCCCTGAGCATGTGGGGTaGCACTTTCAGAAGCAGGTCAAGAGGCAGCAAAGC +
Preference number: 6 (lower is better)
Translates to: LYFLNVGPEHVG*HFQKQVKRQQS
Trigger: GCTTTGCTGCCTCTTGACCTGCTTCTGAAAGTGCCACCCCACATGCTCAGGGCCCACATTAAGGAAATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
ENST00000574215.5
CDS CCA 72 bp CACCCTGTCACTAACTCAGCCTCTATTTCCTTAATGTaGGCCCTGAGCATGTGGGGTGGCACTTTCAGAAGC +
Preference number: 6 (lower is better)
Translates to: HPVTNSASISLM*ALSMWGGTFRS
Trigger: GCTTCTGAAAGTGCCACCCCACATGCTCAGGGCCCACATTAAGGAAATAGAGGCTGAGTTAGTGACAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
ENST00000574215.5
CDS CAA 72 bp CGCCCTGATGGCGGGCTCAGACTTCGTCATGCTATTTaGGGCACTATCGAAGTTAATGGCTGGAAGCTGTTG +
Preference number: 6 (lower is better)
Translates to: RPDGGLRLRHAI*GTIEVNGWKLL
Trigger: CAACAGCTTCCAGCCATTAACTTCGATAGTGCCCAAAATAGCATGACGAAGTCTGAGCCCGCCATCAGGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341435.9
ENST00000429845.6
ENST00000435750.1
ENST00000491627.1
CDS CCA 72 bp GCCCTGATGGCGGGCTCAGACTTCGTCATGCTATTTTaGGCACTATCGAAGTTAATGGCTGGAAGCTGTTGT +
Preference number: 6 (lower is better)
Translates to: ALMAGSDFVMLF*ALSKLMAGSCC
Trigger: ACAACAGCTTCCAGCCATTAACTTCGATAGTGCCCAAAATAGCATGACGAAGTCTGAGCCCGCCATCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341435.9
ENST00000429845.6
ENST00000435750.1
ENST00000491627.1
CDS CAA 72 bp CTGATAAATGAAGCTGCTGGATTCGGCCTGCAGCATTaGCACTGGACAGGCTTCCAATGGAGGAGTGATCAG +
Preference number: 6 (lower is better)
Translates to: LINEAAGFGLQH*HWTGFQWRSDQ
Trigger: CTGATCACTCCTCCATTGGAAGCCTGTCCAGTGCAAATGCTGCAGGCCGAATCCAGCAGCTTCATTTATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341435.9
ENST00000429845.6
CDS TCA 72 bp GGGCAAATGTTGACTGTGTCTCACCCCATGTACCACTaGATCGGGGTCTGTTTCCTTGGATGGTTTCAAAGG +
Preference number: 6 (lower is better)
Translates to: GQMLTVSHPMYH*IGVCFLGWFQR
Trigger: CCTTTGAAACCATCCAAGGAAACAGACCCCGATTCAGTGGTACATGGGGTGAGACACAGTCAACATTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474938.1
CDS TCA 72 bp AGGGCTGGGAAGAGCCTCCAACGGGAGAAGATTGAGTaGCTAAGGAATACCTCACACTCACAGTCCAATGTT +
Preference number: 6 (lower is better)
Translates to: RAGKSLQREKIE*LRNTSHSQSNV
Trigger: AACATTGGACTGTGAGTGTGAGGTATTCCTTAGTCACTCAATCTTCTCCCGTTGGAGGCTCTTCCCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS GCA 72 bp GGGTTCTGCAGGCTGTACAGGAACCATGATGGCATTTaGTTCTTGGGAGGCATCAGGAAGCTTCCAATGATA +
Preference number: 6 (lower is better)
Translates to: GFCRLYRNHDGI*FLGGIRKLPMI
Trigger: TATCATTGGAAGCTTCCTGATGCCTCCCAAGAAGCAAATGCCATCATGGTTCCTGTACAGCCTGCAGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295720.10
ENST00000383771.8
CDS GCA 72 bp AAAGTTCACTTTTCAGGCTGGCTGCTCCACTGCTGCTaGTACTCAAACTTGCCTTCTCAAAGGTCTCGTGAG +
Preference number: 6 (lower is better)
Translates to: KVHFSGWLLHCC*YSNLPSQRSRE
Trigger: CTCACGAGACCTTTGAGAAGGCAAGTTTGAGTAGCAGCAGCAGTGGAGCAGCCAGCCTGAAAAGTGAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295720.10
ENST00000383770.4
ENST00000383771.8
ENST00000429845.6
ENST00000460447.1
ENST00000498182.5
ENST00000574215.5
CDS CCA 72 bp AATGAAGCTGCTGGATTCGGCCTGCAGCATTTGCACTaGACAGGCTTCCAATGGAGGAGTGATCAGAAACAA +
Preference number: 6 (lower is better)
Translates to: NEAAGFGLQHLH*TGFQWRSDQKQ
Trigger: TTGTTTCTGATCACTCCTCCATTGGAAGCCTGTCCAGTGCAAATGCTGCAGGCCGAATCCAGCAGCTTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341435.9
ENST00000429845.6
CDS TCA 72 bp TGGCTGTGTCCCTGCAATAACACTTACATGTCATGTTaGCCAGCTTGTCCACAGTGTGCTGCTCTTCTCCAT +
Preference number: 6 (lower is better)
Translates to: WLCPCNNTYMSC*PACPQCAALLH
Trigger: ATGGAGAAGAGCAGCACACTGTGGACAAGCTGGTCAACATGACATGTAAGTGTTATTGCAGGGACACAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS CAA 90 bp CTCCTTACTTTGGAACTCTTGATAGTAACCTCTTGTAGCCATTCCTaGCCCAGGACAGGAAGAAAAGGCATCAAGCTACATGACCAGCCT +
Preference number: 6 (lower is better)
Translates to: LLTLELLIVTSCSHS*PRTGRKGIKLHDQP
Trigger: AGGCTGGTCATGTAGCTTGATGCCTTTTCTTCCTGTCCTGGGCAAGGAATGGCTACAAGAGGTTACTATCAAGAGTTCCAAAGTAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS TCA 72 bp TCTTGTATTTCCCTAGGGCTCAAGTCTTCTGATAAATaGAGCTGCTGGATTCGGCCTGCAGCATTTGCACTG +
Preference number: 6 (lower is better)
Translates to: SCISLGLKSSDK*SCWIRPAAFAL
Trigger: CAGTGCAAATGCTGCAGGCCGAATCCAGCAGCTTCATTTATCAGAAGACTTGAGCCCTAGGGAAATACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341435.9
ENST00000429845.6
CDS TCA 72 bp GATCTGAGAATCACTGTGCTGCTCCACAAGCAGATATaGAGAGCCAGTCCAGTCACACAAAGAAAACGGACA +
Preference number: 6 (lower is better)
Translates to: DLRITVLLHKQI*RASPVTQRKRT
Trigger: TGTCCGTTTTCTTTGTGTGACTGGACTGGCTCTTCATATCTGCTTGTGGAGCAGCACAGTGATTCTCAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS GCA 72 bp TTTCTGAAAGTTCACTTTTCAGGCTGGCTGCTCCACTaGTGCTGCTACTCAAACTTGCCTTCTCAAAGGTCT +
Preference number: 6 (lower is better)
Translates to: FLKVHFSGWLLH*CCYSNLPSQRS
Trigger: AGACCTTTGAGAAGGCAAGTTTGAGTAGCAGCAGCAGTGGAGCAGCCAGCCTGAAAAGTGAACTTTCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295720.10
ENST00000383770.4
ENST00000383771.8
ENST00000429845.6
ENST00000460447.1
ENST00000498182.5
ENST00000574215.5
CDS GCA 72 bp GTGCCTCCCAAAATGTCTCAGGTCAGAGCTGCAACCTaGGCAACAACGGCTAAGGTAATTTTTATGTTTCCA +
Preference number: 6 (lower is better)
Translates to: VPPKMSQVRAAT*ATTAKVIFMFP
Trigger: TGGAAACATAAAAATTACCTTAGCCGTTGTTGCGCAGGTTGCAGCTCTGACCTGAGACATTTTGGGAGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS CCA 72 bp TCTTTGAGATTTCGAAGAATCACAGCAGGAAGGCTATaGGACTGCCACCCTGTCACTAACTCAGCCTCTATT +
Preference number: 6 (lower is better)
Translates to: SLRFRRITAGRL*DCHPVTNSASI
Trigger: AATAGAGGCTGAGTTAGTGACAGGGTGGCAGTCCCATAGCCTTCCTGCTGTGATTCTTCGAAATCTCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295720.10
ENST00000383771.8
ENST00000429845.6
ENST00000574215.5
CDS CCA 72 bp TTCTTCTGGCTGTATGTTGCCACTGAATATAACAATTaGCCTGGATGCTCAACACCTGAGCTGTGTGTGCGA +
Preference number: 6 (lower is better)
Translates to: FFWLYVATEYNN*PGCSTPELCVR
Trigger: TCGCACACACAGCTCAGGTGTTGAGCATCCAGGCCAATTGTTATATTCAGTGGCAACATACAGCCAGAAGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS CAA 90 bp TCAAGTCTTCTGATAAATGAAGCTGCTGGATTCGGCCTGCAGCATTaGCACTGGACAGGCTTCCAATGGAGGAGTGATCAGAAACAAAAT +
Preference number: 6 (lower is better)
Translates to: SSLLINEAAGFGLQH*HWTGFQWRSDQKQN
Trigger: ATTTTGTTTCTGATCACTCCTCCATTGGAAGCCTGTCCAGTGCAAATGCTGCAGGCCGAATCCAGCAGCTTCATTTATCAGAAGACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341435.9
ENST00000429845.6
CDS CCA 72 bp CAGTGTGCTGCTCTTCTCCATAGCCGAGGTACTCATTaGCTACAATCTCCATATACTGAGCTAGGTTTTCAA +
Preference number: 6 (lower is better)
Translates to: QCAALLHSRGTH*LQSPYTELGFQ
Trigger: TTGAAAACCTAGCTCAGTATATGGAGATTGTAGCCAATGAGTACCTCGGCTATGGAGAAGAGCAGCACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341435.9
ENST00000429845.6
ENST00000491627.1
CDS CAA 90 bp AAAAGGGTTGACAAAGATCCACAATCTCAGGCCAGGCTGGTAGGTTaGTGGATTCTAATTACACATGACTTAACCGCAAAGGCTCTGAAC +
Preference number: 6 (lower is better)
Translates to: KRVDKDPQSQARLVG*WILITHDLTAKALN
Trigger: GTTCAGAGCCTTTGCGGTTAAGTCATGTGTAATTAGAATCCACAAACCTACCAGCCTGGCCTGAGATTGTGGATCTTTGTCAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS CAA 90 bp AATATCCAGTTCTTTACAGATGGCAGGAGTCCATCTCTCCTTACTTaGGAACTCTTGATAGTAACCTCTTGTAGCCATTCCTTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: NIQFFTDGRSPSLLT*ELLIVTSCSHSLPR
Trigger: CCTGGGCAAGGAATGGCTACAAGAGGTTACTATCAAGAGTTCCAAAGTAAGGAGAGATGGACTCCTGCCATCTGTAAAGAACTGGATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS CCA 72 bp AAAGATCCACAATCTCAGGCCAGGCTGGTAGGTTTGTaGATTCTAATTACACATGACTTAACCGCAAAGGCT +
Preference number: 6 (lower is better)
Translates to: KDPQSQARLVGL*ILITHDLTAKA
Trigger: AGCCTTTGCGGTTAAGTCATGTGTAATTAGAATCCACAAACCTACCAGCCTGGCCTGAGATTGTGGATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS CAA 72 bp GACAAAGATCCACAATCTCAGGCCAGGCTGGTAGGTTaGTGGATTCTAATTACACATGACTTAACCGCAAAG +
Preference number: 6 (lower is better)
Translates to: DKDPQSQARLVG*WILITHDLTAK
Trigger: CTTTGCGGTTAAGTCATGTGTAATTAGAATCCACAAACCTACCAGCCTGGCCTGAGATTGTGGATCTTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS CAA 72 bp TTCTTTACAGATGGCAGGAGTCCATCTCTCCTTACTTaGGAACTCTTGATAGTAACCTCTTGTAGCCATTCC +
Preference number: 6 (lower is better)
Translates to: FFTDGRSPSLLT*ELLIVTSCSHS
Trigger: GGAATGGCTACAAGAGGTTACTATCAAGAGTTCCAAAGTAAGGAGAGATGGACTCCTGCCATCTGTAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS CAA 90 bp CCAAAGTCAGTAACGGTTACTTTGTCCTTATCCCCCAACATAATGTaGTTTGGTGTCAGATCTCTATGGACAATCCTCTTCTCCTTGTGT +
Preference number: 6 (lower is better)
Translates to: PKSVTVTLSLSPNIM*FGVRSLWTILFSLC
Trigger: ACACAAGGAGAAGAGGATTGTCCATAGAGATCTGACACCAAACAACATTATGTTGGGGGATAAGGACAAAGTAACCGTTACTGACTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341435.9
ENST00000424275.1
ENST00000429845.6
ENST00000435584.5
ENST00000574215.5
CDS TCA 72 bp AATTTCTGTCTCCTTGTAAAATATGAAGAAGCTGTTTaGTGCCTCCCCAAATGCGAATTTCCACGCTGGTCT +
Preference number: 6 (lower is better)
Translates to: NFCLLVKYEEAV*CLPKCEFPRWS
Trigger: AGACCAGCGTGGAAATTCGCATTTGGGGAGGCATCAAACAGCTTCTTCATATTTTACAAGGAGACAGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341435.9
ENST00000429845.6
CDS TCA 72 bp GCAGCATTTGCACTGGACAGGCTTCCAATGGAGGAGTaGTCAGAAACAAAATTTCTGTCTCCTTGTAAAATA +
Preference number: 6 (lower is better)
Translates to: AAFALDRLPMEE*SETKFLSPCKI
Trigger: TATTTTACAAGGAGACAGAAATTTTGTTTCTGATCACTCCTCCATTGGAAGCCTGTCCAGTGCAAATGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341435.9
ENST00000429845.6
CDS GCA 72 bp CATATAAGCTTGCAGCTTACAAGGTACATGTTAGCCTaGCACAGTTTCTTTGCATCTTCTCATGAAACCACA +
Preference number: 6 (lower is better)
Translates to: HISLQLTRYMLA*HSFFASSHETT
Trigger: TGTGGTTTCATGAGAAGATGCAAAGAAACTGTGGCAGGCTAACATGTACCTTGTAAGCTGCAAGCTTATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS CCA 72 bp GTCTGTTACTTTTTCAGAGTAGATACCTTCTGGGACTaGTTCATATACCGCCTCCACTATTTTTGTAGCCAA +
Preference number: 6 (lower is better)
Translates to: VCYFFRVDTFWD*FIYRLHYFCSQ
Trigger: TTGGCTACAAAAATAGTGGAGGCGGTATATGAACCAGTCCCAGAAGGTATCTACTCTGAAAAAGTAACAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000295720.10
ENST00000383770.4
ENST00000383771.8
ENST00000429845.6
ENST00000574215.5
CDS CCA 72 bp GATGGTGTCTGTTACTTTTTCAGAGTAGATACCTTCTaGGACTGGTTCATATACCGCCTCCACTATTTTTGT +
Preference number: 6 (lower is better)
Translates to: DGVCYFFRVDTF*DWFIYRLHYFC
Trigger: ACAAAAATAGTGGAGGCGGTATATGAACCAGTCCCAGAAGGTATCTACTCTGAAAAAGTAACAGACACCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000295720.10
ENST00000383770.4
ENST00000383771.8
ENST00000429845.6
ENST00000574215.5
CDS CCA 72 bp TCCCCCAACATAATGTTGTTTGGTGTCAGATCTCTATaGACAATCCTCTTCTCCTTGTGTAAGTATCGAAGA +
Preference number: 6 (lower is better)
Translates to: SPNIMLFGVRSL*TILFSLCKYRR
Trigger: TCTTCGATACTTACACAAGGAGAAGAGGATTGTCCATAGAGATCTGACACCAAACAACATTATGTTGGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341435.9
ENST00000424275.1
ENST00000429845.6
ENST00000435584.5
ENST00000474938.1
ENST00000574215.5
CDS CCA 72 bp GGTTACTTTGTCCTTATCCCCCAACATAATGTTGTTTaGTGTCAGATCTCTATGGACAATCCTCTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: GYFVLIPQHNVV*CQISMDNPLLL
Trigger: AAGGAGAAGAGGATTGTCCATAGAGATCTGACACCAAACAACATTATGTTGGGGGATAAGGACAAAGTAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341435.9
ENST00000424275.1
ENST00000429845.6
ENST00000435584.5
ENST00000474938.1
ENST00000574215.5
CDS CAA 72 bp TTTGGTGTCAGATCTCTATGGACAATCCTCTTCTCCTaGTGTAAGTATCGAAGAGCTAAGCACAGCTGTATA +
Preference number: 6 (lower is better)
Translates to: FGVRSLWTILFS*CKYRRAKHSCI
Trigger: TATACAGCTGTGCTTAGCTCTTCGATACTTACACAAGGAGAAGAGGATTGTCCATAGAGATCTGACACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341435.9
ENST00000424275.1
ENST00000429845.6
ENST00000435584.5
ENST00000474938.1
ENST00000574215.5
CDS CAA 72 bp GTAACGGTTACTTTGTCCTTATCCCCCAACATAATGTaGTTTGGTGTCAGATCTCTATGGACAATCCTCTTC +
Preference number: 6 (lower is better)
Translates to: VTVTLSLSPNIM*FGVRSLWTILF
Trigger: GAAGAGGATTGTCCATAGAGATCTGACACCAAACAACATTATGTTGGGGGATAAGGACAAAGTAACCGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341435.9
ENST00000424275.1
ENST00000429845.6
ENST00000435584.5
ENST00000574215.5
CDS CAA 72 bp CTAACGGTTACTTTGTCCTTATCCCCCAACATAATGTaGTTTGGTGTCAGATCTCTATGGACAATCCTCTTC +
Preference number: 6 (lower is better)
Translates to: LTVTLSLSPNIM*FGVRSLWTILF
Trigger: GAAGAGGATTGTCCATAGAGATCTGACACCAAACAACATTATGTTGGGGGATAAGGACAAAGTAACCGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474938.1
CDS CAA 72 bp AATGACATAAATTACAATAGTGGTAGTGATCAGCCATaGAGAACTCACTTTGAGCCAGGCATTGTGCTAGGC +
Preference number: 6 (lower is better)
Translates to: NDINYNSGSDQP*RTHFEPGIVLG
Trigger: GCCTAGCACAATGCCTGGCTCAAAGTGAGTTCTCAATGGCTGATCACTACCACTATTGTAATTTATGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS CAA 90 bp AGAACAAGACTAACGGTTACTTTGTCCTTATCCCCCAACATAATGTaGTTTGGTGTCAGATCTCTATGGACAATCCTCTTCTCCTTGTGT +
Preference number: 6 (lower is better)
Translates to: RTRLTVTLSLSPNIM*FGVRSLWTILFSLC
Trigger: ACACAAGGAGAAGAGGATTGTCCATAGAGATCTGACACCAAACAACATTATGTTGGGGGATAAGGACAAAGTAACCGTTAGTCTTGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474938.1
CDS CCA 72 bp AACACCATACTGCTTTTTCTAGCAAGTCCACAAAAATaGCTGTGTCCCTGCAATAACACTTACATGTCATGT +
Preference number: 6 (lower is better)
Translates to: NTILLFLASPQK*LCPCNNTYMSC
Trigger: ACATGACATGTAAGTGTTATTGCAGGGACACAGCCATTTTTGTGGACTTGCTAGAAAAAGCAGTATGGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS CAA 72 bp CTTACTGTTAAGAGGATAAGTAGACATCATATAAGCTaGCAGCTTACAAGGTACATGTTAGCCTGCCACAGT +
Preference number: 6 (lower is better)
Translates to: LTVKRISRHHIS*QLTRYMLACHS
Trigger: ACTGTGGCAGGCTAACATGTACCTTGTAAGCTGCAAGCTTATATGATGTCTACTTATCCTCTTAACAGTAAG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424275.1
ENST00000435584.5
CDS CAA 90 bp GATTTCAAATTACAAGGGTTACTCTGCTGGCTGAAGAGGGATTTCTaGAATCTCTCTATAACCCTTCTTTTCAAATTGTGGTGCAAAGCT +
Preference number: 6 (lower is better)
Translates to: DFKLQGLLCWLKRDF*NLSITLLFKLWCKA
Trigger: AGCTTTGCACCACAATTTGAAAAGAAGGGTTATAGAGAGATTCAAGAAATCCCTCTTCAGCCAGCAGAGTAACCCTTGTAATTTGAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295720.10
ENST00000383770.4
ENST00000383771.8
ENST00000429845.6
CDS TCA 72 bp CACTTGAAGTTCCTTAACATCATTACCAGTTCAAAGTaGGGCCTATTCTTCAAAGATCCTCTCTGTGAAGAT +
Preference number: 6 (lower is better)
Translates to: HLKFLNIITSSK*GLFFKDPLCED
Trigger: ATCTTCACAGAGAGGATCTTTGAAGAATAGGCCTCACTTTGAACTGGTAATGATGTTAAGGAACTTCAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491627.1
CDS CAA 90 bp TCCCGTTCTAGCTTCTTTTCCAAGGACAACTGGGATGTAGATAAGTaGTCTAAATATTTCATCATGACATCTGATATCATCGAACTGACT +
Preference number: 6 (lower is better)
Translates to: SRSSFFSKDNWDVDK*SKYFIMTSDIIELT
Trigger: AGTCAGTTCGATGATATCAGATGTCATGATGAAATATTTAGACAACTTATCTACATCCCAGTTGTCCTTGGAAAAGAAGCTAGAACGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295720.10
ENST00000383770.4
ENST00000383771.8
ENST00000429845.6
ENST00000460447.1
ENST00000498182.5
ENST00000574215.5
CDS TCA 72 bp GTTTTACCAAATTCCCTCAAGAGTCATTTTGTAATGTaGTGGCACAATATGGACCTTATTTGGCAAGTGACA +
Preference number: 6 (lower is better)
Translates to: VLPNSLKSHFVM*WHNMDLIWQVT
Trigger: TGTCACTTGCCAAATAAGGTCCATATTGTGCCATCACATTACAAAATGACTCTTGAGGGAATTTGGTAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474938.1
CDS CAA 90 bp ATAATGTTGTTTGGTGTCAGATCTCTATGGACAATCCTCTTCTCCTaGTGTAAGTATCGAAGAGCTAAGCACAGCTGTATAAATATTTTC +
Preference number: 6 (lower is better)
Translates to: IMLFGVRSLWTILFS*CKYRRAKHSCINIF
Trigger: GAAAATATTTATACAGCTGTGCTTAGCTCTTCGATACTTACACAAGGAGAAGAGGATTGTCCATAGAGATCTGACACCAAACAACATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341435.9
ENST00000424275.1
ENST00000429845.6
ENST00000435584.5
ENST00000474938.1
ENST00000574215.5
CDS CCA 72 bp TTAATTTCAGATTTCAAATTACAAGGGTTACTCTGCTaGCTGAAGAGGGATTTCTTGAATCTCTCTATAACC +
Preference number: 6 (lower is better)
Translates to: LISDFKLQGLLC*LKRDFLNLSIT
Trigger: GGTTATAGAGAGATTCAAGAAATCCCTCTTCAGCCAGCAGAGTAACCCTTGTAATTTGAAATCTGAAATTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295720.10
ENST00000383770.4
ENST00000383771.8
ENST00000429845.6