RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NEK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000137601

Ensembl transcript IDs: ENST00000439128.6, ENST00000505119.1, ENST00000507142.6, ENST00000509912.5, ENST00000510108.1, ENST00000510533.5, ENST00000511633.5, ENST00000512193.5, ENST00000638824.1

Found 503 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATGAGCCCTTGACAAGGTaGTTTAATGTAGAACTGCTG +
Preference number: 2 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHEPLTR*FNVELL
Trigger: CAGCAGTTCTACATTAAATCACCTTGTCAAGGGCTC...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
3UTR-3UTR GCA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACATTATGCCAACCAGCCTaGTTTGGACTCAGAGGTTCA +
Preference number: 2 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTLCQPA*FGLRGS
Trigger: TGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAA...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507142.6
3UTR-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATAACTGCTGGCCAGAATaGAAACAAGTACTAGACAGA +
Preference number: 2 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHNCWPE*KQVLDR
Trigger: TCTGTCTAGTACTTGTTTTCATTCTGGCCAGCAGTT...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
3UTR-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAAACTGCTGGCCAGAATaGAAACAAGTACTAGACAGA +
Preference number: 2 (lower is better)
Translates to: IFQITYYANQPALDSEVQNCWPE*KQVLDR
Trigger: TCTGTCTAGTACTTGTTTTCATTCTGGCCAGCAGTT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
3UTR-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGGAGCCCTTGACAAGGTaGTTTAATGTAGAACTGCTG +
Preference number: 2 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNREPLTR*FNVELL
Trigger: CAGCAGTTCTACATTAAATCACCTTGTCAAGGGCTC...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
3UTR-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTTGGCATATTGTGATTaGAGCTGTGTGATCAACATC +
Preference number: 2 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHLAYCD*SCVINI
Trigger: GATGTTGATCACACAGCTTCAATCACAATATGCCAA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
3UTR-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATACATCTTATTGTCCTTaGAGCTTATGTATGGAGGAA +
Preference number: 2 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHTSYCP*SLCMEE
Trigger: TTCCTCCATACATAAGCTTCAAGGACAATAAGATGT...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
3UTR-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAACCTAAAGACATTTGCTaGAACTCAAAGTTACCCTAT +
Preference number: 2 (lower is better)
Translates to: IFQITYYANQPALDSEVQPKDIC*NSKLPY
Trigger: ATAGGGTAACTTTGAGTTTCAGCAAATGTCTTTAGG...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
3UTR-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAACATCTTATTGTCCTTaGAGCTTATGTATGGAGGAA +
Preference number: 2 (lower is better)
Translates to: IFQITYYANQPALDSEVQTSYCP*SLCMEE
Trigger: TTCCTCCATACATAAGCTTCAAGGACAATAAGATGT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
3UTR-3UTR TCA 90 bp TTTTCTATCATGTACATGTTTCAGGGCCAAACATATCTGTACAAACCAGTCCAAAACAAAACGCCTTTCTaGGCATTTATTCGCTTAAAC +
Preference number: 2 (lower is better)
Translates to: FSIMYMFQGQTYLYKPVQNKTPF*AFIRLN
Trigger: GTTTAAGCGAATAAATGCTCAGAAAGGCGTTTTGTT...TTGGACTGGTTTGTACAGATATGTTTGGCCCTGAAACATGTACATGATAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510108.1
3UTR-3UTR CCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATAAACCAGGTTATACTTaGCATATTGTGATTGAAGCT +
Preference number: 2 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHKPGYT*HIVIEA
Trigger: AGCTTCAATCACAATATGCCAAGTATAACCTGGTTT...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
3UTR-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGACATCTTATTGTCCTTaGAGCTTATGTATGGAGGAA +
Preference number: 2 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRTSYCP*SLCMEE
Trigger: TTCCTCCATACATAAGCTTCAAGGACAATAAGATGT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
3UTR-3UTR CAA 90 bp GCTAATCGACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATGCCAACCAGCCTGCTTaGGACTCAGAGGTTCAAAAA +
Preference number: 3 (lower is better)
Translates to: ANRLEMAQILLIILIPAHANQPA*DSEVQK
Trigger: TTTTTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGC...ATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGTCGATTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
3UTR-3UTR CAA 90 bp CAAACTGCGGAGATCATAGGAATAATGCAAAGACACAGGTGGAAAAGATCCAGATCCAAAATCTCCAAGTaGTACTGTTCCATCTTTAGT +
Preference number: 3 (lower is better)
Translates to: QTAEIIGIMQRHRWKRSRSKISK*YCSIFS
Trigger: ACTAAAGATGGAACAGTACAACTTGGAGATTTTGGA...TCTGGATCTTTTCCACCTGTGTCTTTGCATTATTCCTATGATCTCCGCAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510108.1
3UTR-3UTR CAA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACATGCTTAAAGACTCCATaGAAAAACCACAGACAGGTC +
Preference number: 3 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTCLKTP*KNHRQV
Trigger: GACCTGTCTGTGGTTTTTCAATGGAGTCTTTAAGCA...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000507142.6
3UTR-3UTR CAA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACAAACATCTTATTGTCCTaGAAGCTTATGTATGGAGGA +
Preference number: 3 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTNILLS*KLMYGG
Trigger: TCCTCCATACATAAGCTTCAAGGACAATAAGATGTT...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507142.6
3UTR-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGAACATCTTATTGTCCTaGAAGCTTATGTATGGAGGA +
Preference number: 3 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRNILLS*KLMYGG
Trigger: TCCTCCATACATAAGCTTCAAGGACAATAAGATGTT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
3UTR-3UTR CAA 90 bp CTGGTAAAACACAGAAGGAGGACATTCCTTGGTAACTTAATAAAAGTAATCCTAATCAAGGTAACTGAATaGAGCTGCAATGAAATAAGG +
Preference number: 3 (lower is better)
Translates to: LVKHRRRTFLGNLIKVILIKVTE*SCNEIR
Trigger: CCTTATTTCATTGCAGCTCAATTCAGTTACCTTGAT...TAGGATTACTTTTATTAAGTTACCAAGGAATGTCCTCCTTCTGTGTTTTACCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505119.1
3UTR TCA 72 bp ACACTGCTAATCGACTGGAGATGGCACAAATCTTATTaGTCATCCTTATTCCTGCACATATATAACATCTTT +
Preference number: 3 (lower is better)
Translates to: TLLIDWRWHKSY*SSLFLHIYNIF
Trigger: AAAGATGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGTCGATTAGCAGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR GCA 90 bp TGTAAGGTTTGTTTTCACAGATTTCAGGTGACAAGTAGTATGGGGTCCCTATGCGTAGAAACGGCGGGGTaGAGCAGGGGGAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: CKVCFHRFQVTSSMGSLCVETAG*SRGSAS
Trigger: GGAGGCACTCCCCCTGCTGCACCCCGCCGTTTCTAC...GCATAGGGACCCCATACTACTTGTCACCTGAAATCTGTGAAAACAAACCTTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR TCA 90 bp TATGGGGTCCCTATGCAAGTTCGAGCCAGCTCTACAGTACTATTAAGAACTCTAGACTGGGAAGCTACTTaGCTGCCACGTGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: YGVPMQVRASSTVLLRTLDWEAT*LPRAPA
Trigger: GGCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTC...TAGAGTTCTTAATAGTACTGTAGAGCTGGCTCGAACTTGCATAGGGACCCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR GCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTGTGCAGCAGGGGGAGTaGCTCCGTTACCGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAVQQGE*LRYRLS
Trigger: GGAGAGGCGGTAACGGAGGCACTCCCCCTGCTGCAC...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTGTAGAAACGGCGGGGTaGAGCAGGGGGAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAVETAG*SRGSAS
Trigger: GGAGGCACTCCCCCTGCTGCACCCCGCCGTTTCTAC...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp TATGGGGTCCCTATGCAAGTTCGAGCCAGCTCTACAGTACTATTAAGAACTCTATACTTGACTGCCACGTaGTCCTGCCTCGCAACAGCG +
Preference number: 4 (lower is better)
Translates to: YGVPMQVRASSTVLLRTLYLTAT*SCLATA
Trigger: CGCTGTTGCGAGGCAGGAGCACGTGGCAGTCAAGTA...TAGAGTTCTTAATAGTACTGTAGAGCTGGCTCGAACTTGCATAGGGACCCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATGTGCAGCAGGGGGAGTaGCTCCGTTACCGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHVQQGE*LRYRLS
Trigger: GGAGAGGCGGTAACGGAGGCACTCCCCCTGCTGCAC...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp TGTTTTCACAGATTTCAGGTGACAAGTAGTATGGGGTCCCTATGCAAGTTCGAGACTGAAAGGGGGCACTaGGACTCTCCACACCTGACA +
Preference number: 4 (lower is better)
Translates to: CFHRFQVTSSMGSLCKFETERGH*DSPHLT
Trigger: TGTCAGGTGTGGAGAGTCTCAGTGCCCCCTTTCAGT...CTCGAACTTGCATAGGGACCCCATACTACTTGTCACCTGAAATCTGTGAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR TCA 90 bp CAAACTGCGGAGATCATAGGAATAATGCAAAGACACAGGTGGAAAAGATCCAGAGCTCACAGTCCAGACTaGAAGGGGGCACTGAGACTC +
Preference number: 4 (lower is better)
Translates to: QTAEIIGIMQRHRWKRSRAHSPD*KGALRL
Trigger: GAGTCTCAGTGCCCCCTTTCAGTCTGGACTGTGAGC...TCTGGATCTTTTCCACCTGTGTCTTTGCATTATTCCTATGATCTCCGCAGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR GCA 90 bp TTTTCTATCATGTACATGTTTCAGGGCCAAACATATCTGTACAAACCAGTCCAAGTGCAGCAGGGGGAGTaGCTCCGTTACCGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: FSIMYMFQGQTYLYKPVQVQQGE*LRYRLS
Trigger: GGAGAGGCGGTAACGGAGGCACTCCCCCTGCTGCAC...TTGGACTGGTTTGTACAGATATGTTTGGCCCTGAAACATGTACATGATAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR GCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAGTGCAGCAGGGGGAGTaGCTCCGTTACCGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQVQQGE*LRYRLS
Trigger: GGAGAGGCGGTAACGGAGGCACTCCCCCTGCTGCAC...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTGCTCACAGTCCAGACTaGAAGGGGGCACTGAGACTC +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAAHSPD*KGALRL
Trigger: GAGTCTCAGTGCCCCCTTTCAGTCTGGACTGTGAGC...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000510533.5
CDS-3UTR GCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTAAACCCTGGAGCGAATaGGGACTAAGGGAGAGCGGC +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAKPWSE*GLRESG
Trigger: GCCGCTCTCCCTTAGTCCGCATTCGCTCCAGGGTTT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000511633.5
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATACTGCCACGTGCTCCTaGCTCGCAACAGCGGCTCTA +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHTATCS*LATAAL
Trigger: TAGAGCCGCTGTTGCGAGGCAGGAGCACGTGGCAGT...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATGGGAAGCTACTTGACTaGCACGTGCTCCTGCCTCGC +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHGKLLD*HVLLPR
Trigger: GCGAGGCAGGAGCACGTGGCAGTCAAGTAGCTTCCC...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTGTAGAAACGGCGGGGTaGAGCAGGGGGAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGVETAG*SRGSAS
Trigger: GGAGGCACTCCCCCTGCTGCACCCCGCCGTTTCTAC...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGGTAGAAACGGCGGGGTaGAGCAGGGGGAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRVETAG*SRGSAS
Trigger: GGAGGCACTCCCCCTGCTGCACCCCGCCGTTTCTAC...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAGACTGGGAAGCTACTTaGCTGCCACGTGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQDWEAT*LPRAPA
Trigger: GGCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTC...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTACTGAAAGGGGGCACTaGGACTCTCCACACCTGACA +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFATERGH*DSPHLT
Trigger: TGTCAGGTGTGGAGAGTCTCAGTGCCCCCTTTCAGT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000510533.5
CDS-3UTR GCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTAGTTATGGGGACAACTaGTCGAGAGGCCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFASYGDN*SRGQGR
Trigger: CCTACCCTGGCCTCTCGAGCAGTTGTCCCCATAACT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp ATGCAAAGACACAGGTGGAAAAGATCCAGATATTATCTTCAGTACCAGGTTTTTACTGCCACGTGCTCCTaGCTCGCAACAGCGGCTCTA +
Preference number: 4 (lower is better)
Translates to: MQRHRWKRSRYYLQYQVFTATCS*LATAAL
Trigger: TAGAGCCGCTGTTGCGAGGCAGGAGCACGTGGCAGT...AAAAACCTGGTACTGAAGATAATATCTGGATCTTTTCCACCTGTGTCTTTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTACTTGACTGCCACGTaGTCCTGCCTCGCAACAGCG +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHYLTAT*SCLATA
Trigger: CGCTGTTGCGAGGCAGGAGCACGTGGCAGTCAAGTA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp TTTTCTATCATGTACATGTTTCAGGGCCAAACATATCTGTACAAACCAGTCCAAGGGAAGCTACTTGACTaGCACGTGCTCCTGCCTCGC +
Preference number: 4 (lower is better)
Translates to: FSIMYMFQGQTYLYKPVQGKLLD*HVLLPR
Trigger: GCGAGGCAGGAGCACGTGGCAGTCAAGTAGCTTCCC...TTGGACTGGTTTGTACAGATATGTTTGGCCCTGAAACATGTACATGATAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR CCA 90 bp TGTTTTCACAGATTTCAGGTGACAAGTAGTATGGGGTCCCTATGCAAGTTCGAGCTAGATTCCGAGTTATaGGGACAACTGCTCGAGAGG +
Preference number: 4 (lower is better)
Translates to: CFHRFQVTSSMGSLCKFELDSEL*GQLLER
Trigger: CCTCTCGAGCAGTTGTCCCCATAACTCGGAATCTAG...CTCGAACTTGCATAGGGACCCCATACTACTTGTCACCTGAAATCTGTGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGGACTGGGAAGCTACTTaGCTGCCACGTGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRDWEAT*LPRAPA
Trigger: GGCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTC...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACAGACTGGGAAGCTACTTaGCTGCCACGTGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITDWEAT*LPRAPA
Trigger: GGCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTC...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATTGATACCACGGGTTTaGCTCCGTCCTGTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQLIPRV*LRPVSG
Trigger: GCCCGAGACAGGACGGAGTCAAACCCGTGGTATCAA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAAACTGCGGAGATCATAGGAATAATGCAAAGACACAGGTGGAAAAGATCCAGAACACTCGTCTTCAGTTaGTACCACGGGTTTGACTCC +
Preference number: 4 (lower is better)
Translates to: QTAEIIGIMQRHRWKRSRTLVFS*YHGFDS
Trigger: GGAGTCAAACCCGTGGTATCAACTGAAGACGAGTGT...TCTGGATCTTTTCCACCTGTGTCTTTGCATTATTCCTATGATCTCCGCAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR GCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGACTGCCACGTGCTCCTaGCTCGCAACAGCGGCTCTA +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRTATCS*LATAAL
Trigger: TAGAGCCGCTGTTGCGAGGCAGGAGCACGTGGCAGT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATACTTGACTGCCACGTaGTCCTGCCTCGCAACAGCG +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQYLTAT*SCLATA
Trigger: CGCTGTTGCGAGGCAGGAGCACGTGGCAGTCAAGTA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGGGGAAGCTACTTGACTaGCACGTGCTCCTGCCTCGC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRGKLLD*HVLLPR
Trigger: GCGAGGCAGGAGCACGTGGCAGTCAAGTAGCTTCCC...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTGGGAAGCTACTTGACTaGCACGTGCTCCTGCCTCGC +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGGKLLD*HVLLPR
Trigger: GCGAGGCAGGAGCACGTGGCAGTCAAGTAGCTTCCC...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATAGGGTCCCAAAACCCTaGAGCGAATGCGGACTAAGG +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHRVPKP*SECGLR
Trigger: CCTTAGTCCGCATTCGCTCCAGGGTTTTGGGACCCT...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000511633.5
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTACACTCGTCTTCAGTTaGTACCACGGGTTTGACTCC +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFATLVFS*YHGFDS
Trigger: GGAGTCAAACCCGTGGTATCAACTGAAGACGAGTGT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGGCTCACAGTCCAGACTaGAAGGGGGCACTGAGACTC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRAHSPD*KGALRL
Trigger: GAGTCTCAGTGCCCCCTTTCAGTCTGGACTGTGAGC...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000510533.5
CDS-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATAGAGGAATCACAAGTTaGCCTCCTGCCTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHRGITS*PPASHF
Trigger: GAAGTGGGAGGCAGGAGGTCAACTTGTGATTCCTCT...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTGTGGAGATGCCTCACTaGACTCGGGACTTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAVEMPH*TRDFLS
Trigger: AGACAAAAAGTCCCGAGTTCAGTGAGGCATCTCCAC...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGAAACCCTGGAGCGAATaGGGACTAAGGGAGAGCGGC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRKPWSE*GLRESG
Trigger: GCCGCTCTCCCTTAGTCCGCATTCGCTCCAGGGTTT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000511633.5
CDS-3UTR GCA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACAAGTTATGGGGACAACTaGTCGAGAGGCCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTSYGDN*SRGQGR
Trigger: CCTACCCTGGCCTCTCGAGCAGTTGTCCCCATAACT...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR GCA 90 bp TTTTCTATCATGTACATGTTTCAGGGCCAAACATATCTGTACAAACCAGTCCAAAGTTATGGGGACAACTaGTCGAGAGGCCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: FSIMYMFQGQTYLYKPVQSYGDN*SRGQGR
Trigger: CCTACCCTGGCCTCTCGAGCAGTTGTCCCCATAACT...TTGGACTGGTTTGTACAGATATGTTTGGCCCTGAAACATGTACATGATAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR GCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTTACTTGACTGCCACGTaGTCCTGCCTCGCAACAGCG +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGYLTAT*SCLATA
Trigger: CGCTGTTGCGAGGCAGGAGCACGTGGCAGTCAAGTA...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTAGTATGGGGTCCCTATaGAAGTTCGAGCCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFASMGSL*KFEPAL
Trigger: TAGAGCTGGCTCGAACTTGCATAGGGACCCCATACT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTGAGCCACCTGTTTCATaGTGTCCCAAAGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAEPPVS*CPKGGE
Trigger: TTCTCCACCTTTGGGACAGCATGAAACAGGTGGCTC...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATCACAAGTTGACCTCCTaGCTCCCACTTCTTGCGATC +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHHKLTS*LPLLAI
Trigger: GATCGCAAGAAGTGGGAGGCAGGAGGTCAACTTGTG...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTGCTAGCTGCCCTTTTTaGCTTTCTGGAAGACCTCGA +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAASCPF*LSGRPR
Trigger: TCGAGGTCTTCCAGAAAGGCAAAAAGGGCAGCTAGC...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAAGGGTCCCAAAACCCTaGAGCGAATGCGGACTAAGG +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQRVPKP*SECGLR
Trigger: CCTTAGTCCGCATTCGCTCCAGGGTTTTGGGACCCT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000511633.5
CDS-3UTR CCA 90 bp GCTAATCGACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATCTAGATTCCGAGTTATaGGGACAACTGCTCGAGAGG +
Preference number: 4 (lower is better)
Translates to: ANRLEMAQILLIILIPAHLDSEL*GQLLER
Trigger: CCTCTCGAGCAGTTGTCCCCATAACTCGGAATCTAG...ATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGTCGATTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGACTGAAAGGGGGCACTaGGACTCTCCACACCTGACA +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRTERGH*DSPHLT
Trigger: TGTCAGGTGTGGAGAGTCTCAGTGCCCCCTTTCAGT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000510533.5
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTTTCACAGATTTCAGGTaGCAAGTAGTATGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAFTDFR*QVVWGP
Trigger: GGGACCCCATACTACTTGTCACCTGAAATCTGTGAA...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTTCTCATCTGTTGCTTTaGTGGAGAGCCACCTGTTTC +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFASHLLL*WRATCF
Trigger: GAAACAGGTGGCTCTCCATCAAAGCAACAGATGAGA...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATGTGGAGATGCCTCACTaGACTCGGGACTTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHVEMPH*TRDFLS
Trigger: AGACAAAAAGTCCCGAGTTCAGTGAGGCATCTCCAC...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTCATTTTCCTGAATGGTaGTCCTATCTGCCGACTGAG +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAHFPEW*SYLPTE
Trigger: CTCAGTCGGCAGATAGGATCACCATTCAGGAAAATG...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp GCTAATCGACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATCATTTTCCTGAATGGTaGTCCTATCTGCCGACTGAG +
Preference number: 4 (lower is better)
Translates to: ANRLEMAQILLIILIPAHHFPEW*SYLPTE
Trigger: CTCAGTCGGCAGATAGGATCACCATTCAGGAAAATG...ATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGTCGATTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR TCA 90 bp TGTAAGGTTTGTTTTCACAGATTTCAGGTGACAAGTAGTATGGGGTCCCTATGCTACAGATATGCTCAGTaGCACAGGACGTTAGTAGGA +
Preference number: 4 (lower is better)
Translates to: CKVCFHRFQVTSSMGSLCYRYAQ*HRTLVG
Trigger: TCCTACTAACGTCCTGTGTCACTGAGCATATCTGTA...GCATAGGGACCCCATACTACTTGTCACCTGAAATCTGTGAAAACAAACCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATAGTATGGGGTCCCTATaGAAGTTCGAGCCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHSMGSL*KFEPAL
Trigger: TAGAGCTGGCTCGAACTTGCATAGGGACCCCATACT...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTGCTTCCCGTTTTCGCTaGAGGAACTCTTCTACTTGT +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAASRFR*RNSSTC
Trigger: ACAAGTAGAAGAGTTCCTGCAGCGAAAACGGGAAGC...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp GCTAATCGACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATGCTCGAGCTTTATTCTaGATAGCTTCCCGTTTTCGC +
Preference number: 4 (lower is better)
Translates to: ANRLEMAQILLIILIPAHARALF*IASRFR
Trigger: GCGAAAACGGGAAGCTATGCAGAATAAAGCTCGAGC...ATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGTCGATTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATGAGCCACCTGTTTCATaGTGTCCCAAAGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHEPPVS*CPKGGE
Trigger: TTCTCCACCTTTGGGACAGCATGAAACAGGTGGCTC...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAACACAAGTTGACCTCCTaGCTCCCACTTCTTGCGATC +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQHKLTS*LPLLAI
Trigger: GATCGCAAGAAGTGGGAGGCAGGAGGTCAACTTGTG...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTTGTTCCATCGAGGCCTaGAGCTCTTGTAAATCTGTG +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFACSIEA*SSCKSV
Trigger: CACAGATTTACAAGAGCTGCAGGCCTCGATGGAACA...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTCACATCTGTCCCATTTaGAGTTGGCTCCACATCACT +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAHICPI*SWLHIT
Trigger: AGTGATGTGGAGCCAACTGCAAATGGGACAGATGTG...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp GCTAATCGACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATCACATCTGTCCCATTTaGAGTTGGCTCCACATCACT +
Preference number: 4 (lower is better)
Translates to: ANRLEMAQILLIILIPAHHICPI*SWLHIT
Trigger: AGTGATGTGGAGCCAACTGCAAATGGGACAGATGTG...ATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGTCGATTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTGCACGTGCATTTGCATaGGCCTTCAGTGATTCGATT +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAARAFA*AFSDSI
Trigger: AATCGAATCACTGAAGGCCCATGCAAATGCACGTGC...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACAACACTCGTCTTCAGTTaGTACCACGGGTTTGACTCC +
Preference number: 4 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTTLVFS*YHGFDS
Trigger: GGAGTCAAACCCGTGGTATCAACTGAAGACGAGTGT...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAGAGACTCTCCACACCTaGCACTCGTCTTCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQETLHT*HSSSVD
Trigger: ATCAACTGAAGACGAGTGTCAGGTGTGGAGAGTCTC...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000510533.5
CDS-3UTR TCA 90 bp ATGCAAAGACACAGGTGGAAAAGATCCAGATATTATCTTCAGTACCAGGTTTTTGAGACTCTCCACACCTaGCACTCGTCTTCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: MQRHRWKRSRYYLQYQVFETLHT*HSSSVD
Trigger: ATCAACTGAAGACGAGTGTCAGGTGTGGAGAGTCTC...AAAAACCTGGTACTGAAGATAATATCTGGATCTTTTCCACCTGTGTCTTTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTAATCGAGTTTTGTCCTaGAGCTGGTCTTTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFANRVLS*SWSFSW
Trigger: CCAGCTAAAAGACCAGCTTCAGGACAAAACTCGATT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp GCTAATCGACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATAATCGAGTTTTGTCCTaGAGCTGGTCTTTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: ANRLEMAQILLIILIPAHNRVLS*SWSFSW
Trigger: CCAGCTAAAAGACCAGCTTCAGGACAAAACTCGATT...ATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGTCGATTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTTCGAGAAGAAAAAGATaGTGGAGCTATAGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFASRRKR*WSYSPS
Trigger: GGAGGGACTATAGCTCCATCATCTTTTTCTTCTCGA...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTCTCATCTGTTGCTTTaGTGGAGAGCCACCTGTTTC +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHSHLLL*WRATCF
Trigger: GAAACAGGTGGCTCTCCATCAAAGCAACAGATGAGA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGAGAGGAATCACAAGTTaGCCTCCTGCCTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRRGITS*PPASHF
Trigger: GAAGTGGGAGGCAGGAGGTCAACTTGTGATTCCTCT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTGTTCCAGGCTCTATATaGATGTCACTAAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAVPGSI*MSLSWS
Trigger: GGACCAACTTAGTGACATTCATATAGAGCCTGGAAC...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTTCACATTTAGAGTGCTaGGAATCATTGGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFASHLEC*ESLVPG
Trigger: GCCTGGAACCAATGATTCTCAGCACTCTAAATGTGA...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTGGTGGTAAATGCGAGTaGGATCGAAATGCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAGGKCE*DRNAKD
Trigger: ATCCTTTGCATTTCGATCTCACTCGCATTTACCACC...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTAGGCTCCATCTGCCATaGCTAAATGAAGAATCTTGG +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFARLHLP*LNEESW
Trigger: CCAAGATTCTTCATTTAGTCATGGCAGATGGAGCCT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp GCTAATCGACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATGAGCCCTTGACAAGGTaGTTTAATGTAGAACTGCTG +
Preference number: 4 (lower is better)
Translates to: ANRLEMAQILLIILIPAHEPLTR*FNVELL
Trigger: CAGCAGTTCTACATTAAATCACCTTGTCAAGGGCTC...ATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGTCGATTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR GCA 90 bp TGTTTTCACAGATTTCAGGTGACAAGTAGTATGGGGTCCCTATGCAAGTTCGAGCCAGGTTTTTCATACTaGCAGCTTCAAAAGCATGTT +
Preference number: 4 (lower is better)
Translates to: CFHRFQVTSSMGSLCKFEPGFSY*QLQKHV
Trigger: AACATGCTTTTGAAGCTGGCAGTATGAAAAACCTGG...CTCGAACTTGCATAGGGACCCCATACTACTTGTCACCTGAAATCTGTGAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR GCA 90 bp GCTAATCGACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATAAAATGGTGATGACCTaGAGCCCCATAAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: ANRLEMAQILLIILIPAHKMVMT*SPIRKS
Trigger: GGATTTCCTTATGGGGCTGCAGGTCATCACCATTTT...ATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGTCGATTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATGCTTCCCGTTTTCGCTaGAGGAACTCTTCTACTTGT +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHASRFR*RNSSTC
Trigger: ACAAGTAGAAGAGTTCCTGCAGCGAAAACGGGAAGC...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATGCTCGAGCTTTATTCTaGATAGCTTCCCGTTTTCGC +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHARALF*IASRFR
Trigger: GCGAAAACGGGAAGCTATGCAGAATAAAGCTCGAGC...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAGAGCCACCTGTTTCATaGTGTCCCAAAGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQEPPVS*CPKGGE
Trigger: TTCTCCACCTTTGGGACAGCATGAAACAGGTGGCTC...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTACAGATCTCATCTGTTaGTTTGATGGAGAGCCACCT +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFATDLIC*FDGEPP
Trigger: AGGTGGCTCTCCATCAAAGCAACAGATGAGATCTGT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGCACAAGTTGACCTCCTaGCTCCCACTTCTTGCGATC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRHKLTS*LPLLAI
Trigger: GATCGCAAGAAGTGGGAGGCAGGAGGTCAACTTGTG...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTGTTCCATCGAGGCCTaGAGCTCTTGTAAATCTGTG +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHCSIEA*SSCKSV
Trigger: CACAGATTTACAAGAGCTGCAGGCCTCGATGGAACA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTTCAGGGCACTTTCACTaGTGGGATTGTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFASGHFH*WDCHLH
Trigger: ATGAAGATGACAATCCCAGCAGTGAAAGTGCCCTGA...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTTATGCCAACCAGCCTaGTTTGGACTCAGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHLCQPA*FGLRGS
Trigger: TGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp GCTAATCGACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATAGCTGCCAGGTTTTaGAGGATTCCCATATGTCCT +
Preference number: 4 (lower is better)
Translates to: ANRLEMAQILLIILIPAHIAARF*RIPICP
Trigger: AGGACATATGGGAATCCTGCAAAACCTGGCAGCTAT...ATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGTCGATTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATGCACGTGCATTTGCATaGGCCTTCAGTGATTCGATT +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHARAFA*AFSDSI
Trigger: AATCGAATCACTGAAGGCCCATGCAAATGCACGTGC...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTACACTCGTCTTCAGTTaGTACCACGGGTTTGACTCC +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGTLVFS*YHGFDS
Trigger: GGAGTCAAACCCGTGGTATCAACTGAAGACGAGTGT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGGAGACTCTCCACACCTaGCACTCGTCTTCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRETLHT*HSSSVD
Trigger: ATCAACTGAAGACGAGTGTCAGGTGTGGAGAGTCTC...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000510533.5
CDS-3UTR TCA 90 bp CAAACTGCGGAGATCATAGGAATAATGCAAAGACACAGGTGGAAAAGATCCAGAAATGGCTTTTCCAAATaGACCTTCTCCAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: QTAEIIGIMQRHRWKRSRNGFSK*TFSNLL
Trigger: CAGAAGATTGGAGAAGGTTCATTTGGAAAAGCCATT...TCTGGATCTTTTCCACCTGTGTCTTTGCATTATTCCTATGATCTCCGCAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR TCA 90 bp ATGCAAAGACACAGGTGGAAAAGATCCAGATATTATCTTCAGTACCAGGTTTTTTTCACAGATTTCAGGTaGCAAGTAGTATGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: MQRHRWKRSRYYLQYQVFFTDFR*QVVWGP
Trigger: GGGACCCCATACTACTTGTCACCTGAAATCTGTGAA...AAAAACCTGGTACTGAAGATAATATCTGGATCTTTTCCACCTGTGTCTTTGCAT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTCTCTTCTCTGGAGTTTaGTGGGCCTGTTTATGTTTT +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFALFSGV*WACLCF
Trigger: AAAACATAAACAGGCCCATCAAACTCCAGAGAAGAG...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTCGAGAAGAAAAAGATaGTGGAGCTATAGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHSRRKR*WSYSPS
Trigger: GGAGGGACTATAGCTCCATCATCTTTTTCTTCTCGA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATCTCATCTGTTGCTTTaGTGGAGAGCCACCTGTTTC +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQSHLLL*WRATCF
Trigger: GAAACAGGTGGCTCTCCATCAAAGCAACAGATGAGA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTCACATTTAGAGTGCTaGGAATCATTGGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHSHLEC*ESLVPG
Trigger: GCCTGGAACCAATGATTCTCAGCACTCTAAATGTGA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATGGTGGTAAATGCGAGTaGGATCGAAATGCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHGGKCE*DRNAKD
Trigger: ATCCTTTGCATTTCGATCTCACTCGCATTTACCACC...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACAAGTATGGGGTCCCTATaGAAGTTCGAGCCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITSMGSL*KFEPAL
Trigger: TAGAGCTGGCTCGAACTTGCATAGGGACCCCATACT...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR GCA 90 bp TTCTCCAATATGGAGTTGACTGATGGTCTATCCCTAGGATTTCTTTTAAATAACAGTATGGGGTCCCTATaGAAGTTCGAGCCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: FSNMELTDGLSLGFLLNNSMGSL*KFEPAL
Trigger: TAGAGCTGGCTCGAACTTGCATAGGGACCCCATACT...GTTATTTAAAAGAAATCCTAGGGATAGACCATCAGTCAACTCCATATTGGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR GCA 90 bp CAAACTGCGGAGATCATAGGAATAATGCAAAGACACAGGTGGAAAAGATCCAGAACTGAGACACCAAACTaGGGAGATCATAGGAATAAT +
Preference number: 4 (lower is better)
Translates to: QTAEIIGIMQRHRWKRSRTETPN*GDHRNN
Trigger: ATTATTCCTATGATCTCCGCAGTTTGGTGTCTCAGT...TCTGGATCTTTTCCACCTGTGTCTTTGCATTATTCCTATGATCTCCGCAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATAAAATGGTGATGACCTaGAGCCCCATAAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHKMVMT*SPIRKS
Trigger: GGATTTCCTTATGGGGCTGCAGGTCATCACCATTTT...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000507142.6
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATCTTTCTACAGCTAGCTaGCCTTTTTGCCTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHLSTAS*PFCLFA
Trigger: TGCAAACAGGCAAAAAGGGCAGCTAGCTGTAGAAAG...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000507142.6
CDS-3UTR GCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAGCTTCCCGTTTTCGCTaGAGGAACTCTTCTACTTGT +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQASRFR*RNSSTC
Trigger: ACAAGTAGAAGAGTTCCTGCAGCGAAAACGGGAAGC...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGGAGCCACCTGTTTCATaGTGTCCCAAAGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNREPPVS*CPKGGE
Trigger: TTCTCCACCTTTGGGACAGCATGAAACAGGTGGCTC...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATACAGATCTCATCTGTTaGTTTGATGGAGAGCCACCT +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHTDLIC*FDGEPP
Trigger: AGGTGGCTCTCCATCAAAGCAACAGATGAGATCTGT...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTCACTGTTATCTGAGTaGCATTCTTCGTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHSLLSE*HSSFRA
Trigger: TGCCCTGAACGAAGAATGGCACTCAGATAACAGTGA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATTATGCCAACCAGCCTaGTTTGGACTCAGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQLCQPA*FGLRGS
Trigger: TGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGGCCTCCATACATAGCTaGCAGGTTTTGCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRASIHS*QVLQDS
Trigger: GGAATCCTGCAAAACCTGGCAGCTATGTATGGAGGC...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507142.6
ENST00000511633.5
CDS-3UTR GCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTGCCTCCATACATAGCTaGCAGGTTTTGCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGASIHS*QVLQDS
Trigger: GGAATCCTGCAAAACCTGGCAGCTATGTATGGAGGC...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507142.6
ENST00000511633.5
CDS-3UTR GCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTGCTAGCTGCCCTTTTTaGCTTTCTGGAAGACCTCGA +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGASCPF*LSGRPR
Trigger: TCGAGGTCTTCCAGAAAGGCAAAAAGGGCAGCTAGC...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTCTAGATTCCGAGTTATaGGGACAACTGCTCGAGAGG +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGLDSEL*GQLLER
Trigger: CCTCTCGAGCAGTTGTCCCCATAACTCGGAATCTAG...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTTCCATCCTTGTTCCCTaGCCCTATTTATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFASILVP*PYLFFP
Trigger: TGGAAAGAATAAATAGGGCCAGGGAACAAGGATGGA...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAGCACGTGCATTTGCATaGGCCTTCAGTGATTCGATT +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQARAFA*AFSDSI
Trigger: AATCGAATCACTGAAGGCCCATGCAAATGCACGTGC...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTATGCTGTCCCAAAGGTaGAGAAACATCAGAACTCTT +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAMLSQR*RNIRTL
Trigger: AAGAGTTCTGATGTTTCTCCACCTTTGGGACAGCAT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTCACCTTATGGAAAAATaGTTCCGGTTGCACAGACTT +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAHLMEK*FRLHRL
Trigger: AAGTCTGTGCAACCGGAACCATTTTTCCATAAGGTG...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAACCAACCAGCCTGCTTTaGACTCAGAGGTTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQPTSLL*TQRFKN
Trigger: GTTTTTGAACCTCTGAGTCCAAAGCAGGCTGGTTGG...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTCCCTTTTTGCCTTTCTaGAAGACCTCGACCATATAT +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAPFLPF*KTSTIY
Trigger: ATATATGGTCGAGGTCTTCCAGAAAGGCAAAAAGGG...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTAATGGCTTTTCCAAATaGACCTTCTCCAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFANGFSK*TFSNLL
Trigger: CAGAAGATTGGAGAAGGTTCATTTGGAAAAGCCATT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAAACTGCGGAGATCATAGGAATAATGCAAAGACACAGGTGGAAAAGATCCAGAAACAAAACGCCTTTCTaGGCATTTATTCGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: QTAEIIGIMQRHRWKRSRNKTPF*AFIRLN
Trigger: GTTTAAGCGAATAAATGCTCAGAAAGGCGTTTTGTT...TCTGGATCTTTTCCACCTGTGTCTTTGCATTATTCCTATGATCTCCGCAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGTTCACAGATTTCAGGTaGCAAGTAGTATGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRFTDFR*QVVWGP
Trigger: GGGACCCCATACTACTTGTCACCTGAAATCTGTGAA...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACATTCACAGATTTCAGGTaGCAAGTAGTATGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITFTDFR*QVVWGP
Trigger: GGGACCCCATACTACTTGTCACCTGAAATCTGTGAA...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATCAATATGGAGTTGACTaGTGGTCTATCCCTAGGATT +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHQYGVD*WSIPRI
Trigger: AATCCTAGGGATAGACCATCAGTCAACTCCATATTG...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTTCTTCTGCAATAAGCTaGGGAGAGAGAAACTTTTCA +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFASSAIS*GERNFS
Trigger: TGAAAAGTTTCTCTCTCCTCAGCTTATTGCAGAAGA...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp GCTAATCGACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATTCTTCTGCAATAAGCTaGGGAGAGAGAAACTTTTCA +
Preference number: 4 (lower is better)
Translates to: ANRLEMAQILLIILIPAHSSAIS*GERNFS
Trigger: TGAAAAGTTTCTCTCTCCTCAGCTTATTGCAGAAGA...ATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGTCGATTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATAGCTGGTATAGGCTGTaGTCCAAACTTCGAAAATGT +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHSWYRL*SKLRKC
Trigger: ACATTTTCGAAGTTTGGATCACAGCCTATACCAGCT...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATCTCTTCTCTGGAGTTTaGTGGGCCTGTTTATGTTTT +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHLFSGV*WACLCF
Trigger: AAAACATAAACAGGCCCATCAAACTCCAGAGAAGAG...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATCGAGAAGAAAAAGATaGTGGAGCTATAGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQSRRKR*WSYSPS
Trigger: GGAGGGACTATAGCTCCATCATCTTTTTCTTCTCGA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGTCTCATCTGTTGCTTTaGTGGAGAGCCACCTGTTTC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRSHLLL*WRATCF
Trigger: GAAACAGGTGGCTCTCCATCAAAGCAACAGATGAGA...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAACTTTTGCATCTCTTCTaGAGTTTCCCGGGTATCAGT +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQLLHLF*SFPGIS
Trigger: ACTGATACCCGGGAAACTTCAGAAGAGATGCAAAAG...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTCATTTTCCTGAATGGTaGTCCTATCTGCCGACTGAG +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGHFPEW*SYLPTE
Trigger: CTCAGTCGGCAGATAGGATCACCATTCAGGAAAATG...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATGAAACTTCATTTTCCTaGATGGTGATCCTATCTGCC +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHETSFS*MVILSA
Trigger: GGCAGATAGGATCACCATTCAGGAAAATGAAGTTTC...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAGTTCCAGGCTCTATATaGATGTCACTAAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQVPGSI*MSLSWS
Trigger: GGACCAACTTAGTGACATTCATATAGAGCCTGGAAC...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATATCAAACAGACCAGTTaGAAGTCCAATCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHIKQTS*KSNQQG
Trigger: TCCTTGCTGATTGGACTTTCAACTGGTCTGTTTGAT...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAGAGCCCTTGACAAGGTaGTTTAATGTAGAACTGCTG +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQEPLTR*FNVELL
Trigger: CAGCAGTTCTACATTAAATCACCTTGTCAAGGGCTC...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTTTGGCATATTGTGATTaGAGCTGTGTGATCAACATC +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFALAYCD*SCVINI
Trigger: GATGTTGATCACACAGCTTCAATCACAATATGCCAA...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTCCAGGTTTTTCATACTaGCAGCTTCAAAAGCATGTT +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAPGFSY*QLQKHV
Trigger: AACATGCTTTTGAAGCTGGCAGTATGAAAAACCTGG...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTACTGAGACACCAAACTaGGGAGATCATAGGAATAAT +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFATETPN*GDHRNN
Trigger: ATTATTCCTATGATCTCCGCAGTTTGGTGTCTCAGT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTTCTGCTCTTTGTTGCTaGATTTGGTCAAAAATGGCA +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFASALCC*IWSKMA
Trigger: TGCCATTTTTGACCAAATGCAGCAACAAAGAGCAGA...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATCCCTTTTTGCCTGTTTaGATTGGCTTGTTTAGACAC +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHPFLPV*IGLFRH
Trigger: GTGTCTAAACAAGCCAATGCAAACAGGCAAAAAGGG...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000507142.6
CDS-3UTR GCA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACACTTTCTACAGCTAGCTaGCCTTTTTGCCTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTLSTAS*PFCLFA
Trigger: TGCAAACAGGCAAAAAGGGCAGCTAGCTGTAGAAAG...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR GCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTGCTCGAGCTTTATTCTaGATAGCTTCCCGTTTTCGC +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGARALF*IASRFR
Trigger: GCGAAAACGGGAAGCTATGCAGAATAAAGCTCGAGC...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGGCTCGAGCTTTATTCTaGATAGCTTCCCGTTTTCGC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRARALF*IASRFR
Trigger: GCGAAAACGGGAAGCTATGCAGAATAAAGCTCGAGC...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAACAGATCTCATCTGTTaGTTTGATGGAGAGCCACCT +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQTDLIC*FDGEPP
Trigger: AGGTGGCTCTCCATCAAAGCAACAGATGAGATCTGT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGTGTTCCATCGAGGCCTaGAGCTCTTGTAAATCTGTG +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRCSIEA*SSCKSV
Trigger: CACAGATTTACAAGAGCTGCAGGCCTCGATGGAACA...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATCACTGTTATCTGAGTaGCATTCTTCGTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQSLLSE*HSSFRA
Trigger: TGCCCTGAACGAAGAATGGCACTCAGATAACAGTGA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAATAGCTGCCAGGTTTTaGAGGATTCCCATATGTCCT +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQIAARF*RIPICP
Trigger: AGGACATATGGGAATCCTGCAAAACCTGGCAGCTAT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507142.6
ENST00000511633.5
CDS-3UTR CCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATATTCACTCTCTTCTCTaGAGTTTGATGGGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHIHSLL*SLMGLF
Trigger: AAACAGGCCCATCAAACTCCAGAGAAGAGAGTGAAT...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGCCCATAAGGAAATCCTaGACGAACTCCAGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRPIRKS*TNSRQN
Trigger: ATTCTGCCTGGAGTTCGTCCAGGATTTCCTTATGGG...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000507142.6
CDS-3UTR CCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTCCCATAAGGAAATCCTaGACGAACTCCAGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGPIRKS*TNSRQN
Trigger: ATTCTGCCTGGAGTTCGTCCAGGATTTCCTTATGGG...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000507142.6
CDS-3UTR CCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATCACCTTATGGAAAAATaGTTCCGGTTGCACAGACTT +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHHLMEK*FRLHRL
Trigger: AAGTCTGTGCAACCGGAACCATTTTTCCATAAGGTG...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGCCAACCAGCCTGCTTTaGACTCAGAGGTTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRPTSLL*TQRFKN
Trigger: GTTTTTGAACCTCTGAGTCCAAAGCAGGCTGGTTGG...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTAACAAAACGCCTTTCTaGGCATTTATTCGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFANKTPF*AFIRLN
Trigger: GTTTAAGCGAATAAATGCTCAGAAAGGCGTTTTGTT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAACAATATGGAGTTGACTaGTGGTCTATCCCTAGGATT +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQQYGVD*WSIPRI
Trigger: AATCCTAGGGATAGACCATCAGTCAACTCCATATTG...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp TTTTCTATCATGTACATGTTTCAGGGCCAAACATATCTGTACAAACCAGTCCAACAATATGGAGTTGACTaGTGGTCTATCCCTAGGATT +
Preference number: 4 (lower is better)
Translates to: FSIMYMFQGQTYLYKPVQQYGVD*WSIPRI
Trigger: AATCCTAGGGATAGACCATCAGTCAACTCCATATTG...TTGGACTGGTTTGTACAGATATGTTTGGCCCTGAAACATGTACATGATAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTCTTCTGCAATAAGCTaGGGAGAGAGAAACTTTTCA +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHSSAIS*GERNFS
Trigger: TGAAAAGTTTCTCTCTCCTCAGCTTATTGCAGAAGA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAAGCTGGTATAGGCTGTaGTCCAAACTTCGAAAATGT +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQSWYRL*SKLRKC
Trigger: ACATTTTCGAAGTTTGGATCACAGCCTATACCAGCT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CTGGTAAAACACAGAAGGAGGACATTCCTTGGTAACTTAATAAAAGTAATCCTAAATCGAGTTTTGTCCTaGAGCTGGTCTTTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LVKHRRRTFLGNLIKVILNRVLS*SWSFSW
Trigger: CCAGCTAAAAGACCAGCTTCAGGACAAAACTCGATT...TAGGATTACTTTTATTAAGTTACCAAGGAATGTCCTCCTTCTGTGTTTTACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000505119.1
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGAATCGAGTTTTGTCCTaGAGCTGGTCTTTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRNRVLS*SWSFSW
Trigger: CCAGCTAAAAGACCAGCTTCAGGACAAAACTCGATT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGTCGAGAAGAAAAAGATaGTGGAGCTATAGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRSRRKR*WSYSPS
Trigger: GGAGGGACTATAGCTCCATCATCTTTTTCTTCTCGA...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTTCTGTTGGCGCTCATTaGAATTCTGTAGTCTTATTT +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFASVGAH*NSVVLF
Trigger: AAATAAGACTACAGAATTTCAATGAGCGCCAACAGA...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGCTTTTGCATCTCTTCTaGAGTTTCCCGGGTATCAGT +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRLLHLF*SFPGIS
Trigger: ACTGATACCCGGGAAACTTCAGAAGAGATGCAAAAG...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACACTTTTGCATCTCTTCTaGAGTTTCCCGGGTATCAGT +
Preference number: 4 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITLLHLF*SFPGIS
Trigger: ACTGATACCCGGGAAACTTCAGAAGAGATGCAAAAG...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATATCCTATCTGCCGACTaGGTTTCCTTTGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHILSAD*VSFVSF
Trigger: AAAAGAAACAAAGGAAACTCAGTCGGCAGATAGGAT...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGGTTCCAGGCTCTATATaGATGTCACTAAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRVPGSI*MSLSWS
Trigger: GGACCAACTTAGTGACATTCATATAGAGCCTGGAAC...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTTCACATTTAGAGTGCTaGGAATCATTGGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGSHLEC*ESLVPG
Trigger: GCCTGGAACCAATGATTCTCAGCACTCTAAATGTGA...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGGGTGGTAAATGCGAGTaGGATCGAAATGCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRGGKCE*DRNAKD
Trigger: ATCCTTTGCATTTCGATCTCACTCGCATTTACCACC...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACAATCAAACAGACCAGTTaGAAGTCCAATCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTIKQTS*KSNQQG
Trigger: TCCTTGCTGATTGGACTTTCAACTGGTCTGTTTGAT...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAATCAAACAGACCAGTTaGAAGTCCAATCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQIKQTS*KSNQQG
Trigger: TCCTTGCTGATTGGACTTTCAACTGGTCTGTTTGAT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACAATTTCAAGATTGTCTTaGCGAACATCTCCTACGGTG +
Preference number: 4 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTISRLS*RTSPTV
Trigger: CACCGTAGGAGATGTTCGTCAAGACAATCTTGAAAT...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAATTTCAAGATTGTCTTaGCGAACATCTCCTACGGTG +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQISRLS*RTSPTV
Trigger: CACCGTAGGAGATGTTCGTCAAGACAATCTTGAAAT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAATTTCCTGCTCCAGATaGAGTCTCAGTTCCTCTAAA +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQISCSR*SLSSSK
Trigger: TTTAGAGGAACTGAGACTTCATCTGGAGCAGGAAAT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACAAGGCTCCATCTGCCATaGCTAAATGAAGAATCTTGG +
Preference number: 4 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITRLHLP*LNEESW
Trigger: CCAAGATTCTTCATTTAGTCATGGCAGATGGAGCCT...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGAGGCTCCATCTGCCATaGCTAAATGAAGAATCTTGG +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRRLHLP*LNEESW
Trigger: CCAAGATTCTTCATTTAGTCATGGCAGATGGAGCCT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTAGGCTCCATCTGCCATaGCTAAATGAAGAATCTTGG +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGRLHLP*LNEESW
Trigger: CCAAGATTCTTCATTTAGTCATGGCAGATGGAGCCT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTCCTAAAGACATTTGCTaGAACTCAAAGTTACCCTAT +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAPKDIC*NSKLPY
Trigger: ATAGGGTAACTTTGAGTTTCAGCAAATGTCTTTAGG...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp GCTAATCGACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATACATCTTATTGTCCTTaGAGCTTATGTATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: ANRLEMAQILLIILIPAHTSYCP*SLCMEE
Trigger: TTCCTCCATACATAAGCTTCAAGGACAATAAGATGT...ATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGTCGATTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR TCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTACATCTTATTGTCCTTaGAGCTTATGTATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFATSYCP*SLCMEE
Trigger: TTCCTCCATACATAAGCTTCAAGGACAATAAGATGT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTGGATGCTTCATGTTTaGCAATACTGCAACTTCTCT +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHWMLHV*QYCNFS
Trigger: AGAGAAGTTGCAGTATTGGCAAACATGAAGCATCCA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATCCAGGTTTTTCATACTaGCAGCTTCAAAAGCATGTT +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHPGFSY*QLQKHV
Trigger: AACATGCTTTTGAAGCTGGCAGTATGAAAAACCTGG...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTCTGCTCTTTGTTGCTaGATTTGGTCAAAAATGGCA +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHSALCC*IWSKMA
Trigger: TGCCATTTTTGACCAAATGCAGCAACAAAGAGCAGA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTATTTGCCTCAGTCTTaGCAGATAAACCATATGTCC +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHYLPQS*QINHMS
Trigger: GGACATATGGTTTATCTGGCAAGACTGAGGCAAATA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000510533.5
CDS-3UTR GCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGTCAGGGCACTTTCACTaGTGGGATTGTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRSGHFH*WDCHLH
Trigger: ATGAAGATGACAATCCCAGCAGTGAAAGTGCCCTGA...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTTCAGGGCACTTTCACTaGTGGGATTGTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGSGHFH*WDCHLH
Trigger: ATGAAGATGACAATCCCAGCAGTGAAAGTGCCCTGA...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACATCACTGTTATCTGAGTaGCATTCTTCGTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITSLLSE*HSSFRA
Trigger: TGCCCTGAACGAAGAATGGCACTCAGATAACAGTGA...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR GCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTTCACTGTTATCTGAGTaGCATTCTTCGTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGSLLSE*HSSFRA
Trigger: TGCCCTGAACGAAGAATGGCACTCAGATAACAGTGA...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAATTCACTCTCTTCTCTaGAGTTTGATGGGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQIHSLL*SLMGLF
Trigger: AAACAGGCCCATCAAACTCCAGAGAAGAGAGTGAAT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATCCATCCTTGTTCCCTaGCCCTATTTATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQSILVP*PYLFFP
Trigger: TGGAAAGAATAAATAGGGCCAGGGAACAAGGATGGA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACATCCATCCTTGTTCCCTaGCCCTATTTATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTSILVP*PYLFFP
Trigger: TGGAAAGAATAAATAGGGCCAGGGAACAAGGATGGA...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAATGCTGTCCCAAAGGTaGAGAAACATCAGAACTCTT +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQMLSQR*RNIRTL
Trigger: AAGAGTTCTGATGTTTCTCCACCTTTGGGACAGCAT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTATCAGTAATAGTGCATaGCAAGCTCTCATCTTTGTT +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAISNSA*QALIFV
Trigger: AACAAAGATGAGAGCTTGCCATGCACTATTACTGAT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp GCTAATCGACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATCAGTAATAGTGCATaGCAAGCTCTCATCTTTGTT +
Preference number: 4 (lower is better)
Translates to: ANRLEMAQILLIILIPAHISNSA*QALIFV
Trigger: AACAAAGATGAGAGCTTGCCATGCACTATTACTGAT...ATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGTCGATTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAAATGGCTTTTCCAAATaGACCTTCTCCAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQNGFSK*TFSNLL
Trigger: CAGAAGATTGGAGAAGGTTCATTTGGAAAAGCCATT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGCAATATGGAGTTGACTaGTGGTCTATCCCTAGGATT +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRQYGVD*WSIPRI
Trigger: AATCCTAGGGATAGACCATCAGTCAACTCCATATTG...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CTGGTAAAACACAGAAGGAGGACATTCCTTGGTAACTTAATAAAAGTAATCCTACAATATGGAGTTGACTaGTGGTCTATCCCTAGGATT +
Preference number: 4 (lower is better)
Translates to: LVKHRRRTFLGNLIKVILQYGVD*WSIPRI
Trigger: AATCCTAGGGATAGACCATCAGTCAACTCCATATTG...TAGGATTACTTTTATTAAGTTACCAAGGAATGTCCTCCTTCTGTGTTTTACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505119.1
CDS-3UTR TCA 90 bp CTGGTAAAACACAGAAGGAGGACATTCCTTGGTAACTTAATAAAAGTAATCCTAAGCTGGTATAGGCTGTaGTCCAAACTTCGAAAATGT +
Preference number: 4 (lower is better)
Translates to: LVKHRRRTFLGNLIKVILSWYRL*SKLRKC
Trigger: ACATTTTCGAAGTTTGGATCACAGCCTATACCAGCT...TAGGATTACTTTTATTAAGTTACCAAGGAATGTCCTCCTTCTGTGTTTTACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505119.1
CDS-3UTR TCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTAGCTGGTATAGGCTGTaGTCCAAACTTCGAAAATGT +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGSWYRL*SKLRKC
Trigger: ACATTTTCGAAGTTTGGATCACAGCCTATACCAGCT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAGGCTTTGTAATTTTCTaGGCAGGCATAACAGAAATC +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQGFVIF*AGITEI
Trigger: GATTTCTGTTATGCCTGCTCAGAAAATTACAAAGCC...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTCTCTTCTCTGGAGTTTaGTGGGCCTGTTTATGTTTT +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGLFSGV*WACLCF
Trigger: AAAACATAAACAGGCCCATCAAACTCCAGAGAAGAG...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACACTCTTCTCTGGAGTTTaGTGGGCCTGTTTATGTTTT +
Preference number: 4 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITLFSGV*WACLCF
Trigger: AAAACATAAACAGGCCCATCAAACTCCAGAGAAGAG...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTCTGTTGGCGCTCATTaGAATTCTGTAGTCTTATTT +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHSVGAH*NSVVLF
Trigger: AAATAAGACTACAGAATTTCAATGAGCGCCAACAGA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTCTAATAGTTCTGTCTaGAGTTGTAGTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHSNSSV*SCSSAS
Trigger: AGAAGCTGAACTACAACTTCAGACAGAACTATTAGA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAATCCTATCTGCCGACTaGGTTTCCTTTGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQILSAD*VSFVSF
Trigger: AAAAGAAACAAAGGAAACTCAGTCGGCAGATAGGAT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGGAAACTTCATTTTCCTaGATGGTGATCCTATCTGCC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRETSFS*MVILSA
Trigger: GGCAGATAGGATCACCATTCAGGAAAATGAAGTTTC...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTGAAACTTCATTTTCCTaGATGGTGATCCTATCTGCC +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGETSFS*MVILSA
Trigger: GGCAGATAGGATCACCATTCAGGAAAATGAAGTTTC...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGATCAAACAGACCAGTTaGAAGTCCAATCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRIKQTS*KSNQQG
Trigger: TCCTTGCTGATTGGACTTTCAACTGGTCTGTTTGAT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTATTTCAAGATTGTCTTaGCGAACATCTCCTACGGTG +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGISRLS*RTSPTV
Trigger: CACCGTAGGAGATGTTCGTCAAGACAATCTTGAAAT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTATTTCCTGCTCCAGATaGAGTCTCAGTTCCTCTAAA +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGISCSR*SLSSSK
Trigger: TTTAGAGGAACTGAGACTTCATCTGGAGCAGGAAAT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTAACTGCTGGCCAGAATaGAAACAAGTACTAGACAGA +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGNCWPE*KQVLDR
Trigger: TCTGTCTAGTACTTGTTTTCATTCTGGCCAGCAGTT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGAACTGCTGGCCAGAATaGAAACAAGTACTAGACAGA +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRNCWPE*KQVLDR
Trigger: TCTGTCTAGTACTTGTTTTCATTCTGGCCAGCAGTT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATTGGCATATTGTGATTaGAGCTGTGTGATCAACATC +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQLAYCD*SCVINI
Trigger: GATGTTGATCACACAGCTTCAATCACAATATGCCAA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATGGATGCTTCATGTTTaGCAATACTGCAACTTCTCT +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQWMLHV*QYCNFS
Trigger: AGAGAAGTTGCAGTATTGGCAAACATGAAGCATCCA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAACCAGGTTTTTCATACTaGCAGCTTCAAAAGCATGTT +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQPGFSY*QLQKHV
Trigger: AACATGCTTTTGAAGCTGGCAGTATGAAAAACCTGG...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAACTGAGACACCAAACTaGGGAGATCATAGGAATAAT +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQTETPN*GDHRNN
Trigger: ATTATTCCTATGATCTCCGCAGTTTGGTGTCTCAGT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTCTTCTGCTCTTTGTTaGTGCATTTGGTCAAAAATG +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHSSALC*CIWSKM
Trigger: CATTTTTGACCAAATGCAGCAACAAAGAGCAGAAGA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTCCCTTTTTGCCTGTTTaGATTGGCTTGTTTAGACAC +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGPFLPV*IGLFRH
Trigger: GTGTCTAAACAAGCCAATGCAAACAGGCAAAAAGGG...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000507142.6
CDS-3UTR GCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATAAAAATGGTTCCGGTTaGACAGACTTATCTACATCA +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHKNGSG*TDLSTS
Trigger: TGATGTAGATAAGTCTGTGCAACCGGAACCATTTTT...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTACCTCCCCAAAATCATaGCCATCTTTCAGGATTGTA +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGTSPKS*PSFRIV
Trigger: TACAATCCTGAAAGATGGGCATGATTTTGGGGAGGT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR GCA 90 bp TTCTCCAATATGGAGTTGACTGATGGTCTATCCCTAGGATTTCTTTTAAATAACGCATCTTTACAGATATaGTCAGTGACACAGGACGTT +
Preference number: 4 (lower is better)
Translates to: FSNMELTDGLSLGFLLNNASLQI*SVTQDV
Trigger: AACGTCCTGTGTCACTGAGCATATCTGTAAAGATGC...GTTATTTAAAAGAAATCCTAGGGATAGACCATCAGTCAACTCCATATTGGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR CCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGATTCACTCTCTTCTCTaGAGTTTGATGGGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRIHSLL*SLMGLF
Trigger: AAACAGGCCCATCAAACTCCAGAGAAGAGAGTGAAT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGTCCATCCTTGTTCCCTaGCCCTATTTATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRSILVP*PYLFFP
Trigger: TGGAAAGAATAAATAGGGCCAGGGAACAAGGATGGA...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTGCATTTGGTCAAAAATaGCATGGTAATGTTCATACT +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAAFGQK*HGNVHT
Trigger: AGTATGAACATTACCATGCCATTTTTGACCAAATGC...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTTGGCTTTAATCTGTTaGCGCTCATTGAAATTCTGT +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHLALIC*RSLKFC
Trigger: ACAGAATTTCAATGAGCGCCAACAGATTAAAGCCAA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACAATGCTGTCCCAAAGGTaGAGAAACATCAGAACTCTT +
Preference number: 4 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITMLSQR*RNIRTL
Trigger: AAGAGTTCTGATGTTTCTCCACCTTTGGGACAGCAT...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTATGCTGTCCCAAAGGTaGAGAAACATCAGAACTCTT +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGMLSQR*RNIRTL
Trigger: AAGAGTTCTGATGTTTCTCCACCTTTGGGACAGCAT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGCACCTTATGGAAAAATaGTTCCGGTTGCACAGACTT +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRHLMEK*FRLHRL
Trigger: AAGTCTGTGCAACCGGAACCATTTTTCCATAAGGTG...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATCTCAGTTCCTCTAAATaGTTAAAGACACTATCGCAT +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHLSSSK*LKTLSH
Trigger: ATGCGATAGTGTCTTTAACCATTTAGAGGAACTGAG...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTAAACCAGGTTATACTTaGCATATTGTGATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAKPGYT*HIVIEA
Trigger: AGCTTCAATCACAATATGCCAAGTATAACCTGGTTT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACAAGCCCTTTTCCTCACTaGCATAATCTTTCCATAACA +
Preference number: 4 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTSPFPH*HNLSIT
Trigger: TGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCT...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTCCCTTTTTGCCTTTCTaGAAGACCTCGACCATATAT +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGPFLPF*KTSTIY
Trigger: ATATATGGTCGAGGTCTTCCAGAAAGGCAAAAAGGG...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGAATGGCTTTTCCAAATaGACCTTCTCCAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRNGFSK*TFSNLL
Trigger: CAGAAGATTGGAGAAGGTTCATTTGGAAAAGCCATT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTAATGGCTTTTCCAAATaGACCTTCTCCAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGNGFSK*TFSNLL
Trigger: CAGAAGATTGGAGAAGGTTCATTTGGAAAAGCCATT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CTGGTAAAACACAGAAGGAGGACATTCCTTGGTAACTTAATAAAAGTAATCCTATCTTCTGCAATAAGCTaGGGAGAGAGAAACTTTTCA +
Preference number: 4 (lower is better)
Translates to: LVKHRRRTFLGNLIKVILSSAIS*GERNFS
Trigger: TGAAAAGTTTCTCTCTCCTCAGCTTATTGCAGAAGA...TAGGATTACTTTTATTAAGTTACCAAGGAATGTCCTCCTTCTGTGTTTTACCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505119.1
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGGGCTTTGTAATTTTCTaGGCAGGCATAACAGAAATC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRGFVIF*AGITEI
Trigger: GATTTCTGTTATGCCTGCTCAGAAAATTACAAAGCC...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CTGGTAAAACACAGAAGGAGGACATTCCTTGGTAACTTAATAAAAGTAATCCTAGGCTTTGTAATTTTCTaGGCAGGCATAACAGAAATC +
Preference number: 4 (lower is better)
Translates to: LVKHRRRTFLGNLIKVILGFVIF*AGITEI
Trigger: GATTTCTGTTATGCCTGCTCAGAAAATTACAAAGCC...TAGGATTACTTTTATTAAGTTACCAAGGAATGTCCTCCTTCTGTGTTTTACCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505119.1
CDS-3UTR TCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTGGCTTTGTAATTTTCTaGGCAGGCATAACAGAAATC +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGGFVIF*AGITEI
Trigger: GATTTCTGTTATGCCTGCTCAGAAAATTACAAAGCC...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACATCTGTTGGCGCTCATTaGAATTCTGTAGTCTTATTT +
Preference number: 4 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTSVGAH*NSVVLF
Trigger: AAATAAGACTACAGAATTTCAATGAGCGCCAACAGA...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR TCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATCTAATAGTTCTGTCTaGAGTTGTAGTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQSNSSV*SCSSAS
Trigger: AGAAGCTGAACTACAACTTCAGACAGAACTATTAGA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGATCCTATCTGCCGACTaGGTTTCCTTTGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRILSAD*VSFVSF
Trigger: AAAAGAAACAAAGGAAACTCAGTCGGCAGATAGGAT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTTTGGCATATTGTGATTaGAGCTGTGTGATCAACATC +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGLAYCD*SCVINI
Trigger: GATGTTGATCACACAGCTTCAATCACAATATGCCAA...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGTTGGCATATTGTGATTaGAGCTGTGTGATCAACATC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRLAYCD*SCVINI
Trigger: GATGTTGATCACACAGCTTCAATCACAATATGCCAA...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTTGGATGCTTCATGTTTaGCAATACTGCAACTTCTCT +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGWMLHV*QYCNFS
Trigger: AGAGAAGTTGCAGTATTGGCAAACATGAAGCATCCA...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGCCAGGTTTTTCATACTaGCAGCTTCAAAAGCATGTT +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRPGFSY*QLQKHV
Trigger: AACATGCTTTTGAAGCTGGCAGTATGAAAAACCTGG...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CTGGTAAAACACAGAAGGAGGACATTCCTTGGTAACTTAATAAAAGTAATCCTAACTGAGACACCAAACTaGGGAGATCATAGGAATAAT +
Preference number: 4 (lower is better)
Translates to: LVKHRRRTFLGNLIKVILTETPN*GDHRNN
Trigger: ATTATTCCTATGATCTCCGCAGTTTGGTGTCTCAGT...TAGGATTACTTTTATTAAGTTACCAAGGAATGTCCTCCTTCTGTGTTTTACCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505119.1
CDS-3UTR GCA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACAACTGAGACACCAAACTaGGGAGATCATAGGAATAAT +
Preference number: 4 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITTETPN*GDHRNN
Trigger: ATTATTCCTATGATCTCCGCAGTTTGGTGTCTCAGT...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR GCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGACTGAGACACCAAACTaGGGAGATCATAGGAATAAT +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRTETPN*GDHRNN
Trigger: ATTATTCCTATGATCTCCGCAGTTTGGTGTCTCAGT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTTCTGCTCTTTGTTGCTaGATTTGGTCAAAAATGGCA +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGSALCC*IWSKMA
Trigger: TGCCATTTTTGACCAAATGCAGCAACAAAGAGCAGA...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATCTTCTGCTCTTTGTTaGTGCATTTGGTCAAAAATG +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQSSALC*CIWSKM
Trigger: CATTTTTGACCAAATGCAGCAACAAAGAGCAGAAGA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGTATTTGCCTCAGTCTTaGCAGATAAACCATATGTCC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRYLPQS*QINHMS
Trigger: GGACATATGGTTTATCTGGCAAGACTGAGGCAAATA...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000510533.5
CDS-3UTR GCA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACAAAAAATGGTTCCGGTTaGACAGACTTATCTACATCA +
Preference number: 4 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTKNGSG*TDLSTS
Trigger: TGATGTAGATAAGTCTGTGCAACCGGAACCATTTTT...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR GCA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACATCAAATTACATATTATaGCAACCAGCCTGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTSNYIL*QPACFG
Trigger: TCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGA...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CCA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATGCATTTGGTCAAAAATaGCATGGTAATGTTCATACT +
Preference number: 4 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHAFGQK*HGNVHT
Trigger: AGTATGAACATTACCATGCCATTTTTGACCAAATGC...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTCAGAATTCCTCTTTCTaGAAGACCTCGACCATATAT +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGQNSSF*KTSTIY
Trigger: ATATATGGTCGAGGTCTTCCAGAAAGAGGAATTCTG...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000507142.6
CDS-3UTR CCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGCAGAATTCCTCTTTCTaGAAGACCTCGACCATATAT +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRQNSSF*KTSTIY
Trigger: ATATATGGTCGAGGTCTTCCAGAAAGAGGAATTCTG...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000507142.6
CDS-3UTR CCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATTGGCTTTAATCTGTTaGCGCTCATTGAAATTCTGT +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQLALIC*RSLKFC
Trigger: ACAGAATTTCAATGAGCGCCAACAGATTAAAGCCAA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAATCAGTAATAGTGCATaGCAAGCTCTCATCTTTGTT +
Preference number: 4 (lower is better)
Translates to: IFQITYYANQPALDSEVQISNSA*QALIFV
Trigger: AACAAAGATGAGAGCTTGCCATGCACTATTACTGAT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTACACTGCTAATCGACTaGAGATGGCACAAATCTTAT +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGTLLID*RWHKSY
Trigger: ATAAGATTTGTGCCATCTCCAGTCGATTAGCAGTGT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR TCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTAACAAAACGCCTTTCTaGGCATTTATTCGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGNKTPF*AFIRLN
Trigger: GTTTAAGCGAATAAATGCTCAGAAAGGCGTTTTGTT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGAACAAAACGCCTTTCTaGGCATTTATTCGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRNKTPF*AFIRLN
Trigger: GTTTAAGCGAATAAATGCTCAGAAAGGCGTTTTGTT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGTCTGTTGGCGCTCATTaGAATTCTGTAGTCTTATTT +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRSVGAH*NSVVLF
Trigger: AAATAAGACTACAGAATTTCAATGAGCGCCAACAGA...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACATCTAATAGTTCTGTCTaGAGTTGTAGTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITSNSSV*SCSSAS
Trigger: AGAAGCTGAACTACAACTTCAGACAGAACTATTAGA...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR TCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGTCTAATAGTTCTGTCTaGAGTTGTAGTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRSNSSV*SCSSAS
Trigger: AGAAGCTGAACTACAACTTCAGACAGAACTATTAGA...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACACCTAAAGACATTTGCTaGAACTCAAAGTTACCCTAT +
Preference number: 4 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITPKDIC*NSKLPY
Trigger: ATAGGGTAACTTTGAGTTTCAGCAAATGTCTTTAGG...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR TCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTCCTAAAGACATTTGCTaGAACTCAAAGTTACCCTAT +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGPKDIC*NSKLPY
Trigger: ATAGGGTAACTTTGAGTTTCAGCAAATGTCTTTAGG...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR TCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTACATCTTATTGTCCTTaGAGCTTATGTATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGTSYCP*SLCMEE
Trigger: TTCCTCCATACATAAGCTTCAAGGACAATAAGATGT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTTCTTCTGCTCTTTGTTaGTGCATTTGGTCAAAAATG +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGSSALC*CIWSKM
Trigger: CATTTTTGACCAAATGCAGCAACAAAGAGCAGAAGA...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGAAAAATGGTTCCGGTTaGACAGACTTATCTACATCA +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRKNGSG*TDLSTS
Trigger: TGATGTAGATAAGTCTGTGCAACCGGAACCATTTTT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTTCAAATTACATATTATaGCAACCAGCCTGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGSNYIL*QPACFG
Trigger: TCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGA...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGTCAAATTACATATTATaGCAACCAGCCTGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRSNYIL*QPACFG
Trigger: TCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGA...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGTTGGCTTTAATCTGTTaGCGCTCATTGAAATTCTGT +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRLALIC*RSLKFC
Trigger: ACAGAATTTCAATGAGCGCCAACAGATTAAAGCCAA...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTCTCAGTTCCTCTAAATaGTTAAAGACACTATCGCAT +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGLSSSK*LKTLSH
Trigger: ATGCGATAGTGTCTTTAACCATTTAGAGGAACTGAG...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGCTCAGTTCCTCTAAATaGTTAAAGACACTATCGCAT +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRLSSSK*LKTLSH
Trigger: ATGCGATAGTGTCTTTAACCATTTAGAGGAACTGAG...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR GCA 90 bp CTGGTAAAACACAGAAGGAGGACATTCCTTGGTAACTTAATAAAAGTAATCCTATGGCTCTGCTTAGGTTaGTCAAAAGTTATTTCATTT +
Preference number: 4 (lower is better)
Translates to: LVKHRRRTFLGNLIKVILWLCLG*SKVISF
Trigger: AAATGAAATAACTTTTGAGCAACCTAAGCAGAGCCA...TAGGATTACTTTTATTAAGTTACCAAGGAATGTCCTCCTTCTGTGTTTTACCAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505119.1
CDS-3UTR CCA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACAGCATTTGGTCAAAAATaGCATGGTAATGTTCATACT +
Preference number: 4 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITAFGQK*HGNVHT
Trigger: AGTATGAACATTACCATGCCATTTTTGACCAAATGC...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CCA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTAAACCAGGTTATACTTaGCATATTGTGATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGKPGYT*HIVIEA
Trigger: AGCTTCAATCACAATATGCCAAGTATAACCTGGTTT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CCA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGAAACCAGGTTATACTTaGCATATTGTGATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRKPGYT*HIVIEA
Trigger: AGCTTCAATCACAATATGCCAAGTATAACCTGGTTT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS GCA 90 bp AGGGTAAGGACTCCGCAACCTAGGGTCCCAAAACCCTGGAGCGAATaGGGACTAAGGGAGAGCGGCCGGCGCGTCACCGGCGCTGGCGTG +
Preference number: 5 (lower is better)
Translates to: RVRTPQPRVPKPWSE*GLRESGRRVTGAGV
Trigger: CACGCCAGCGCCGGTGACGCGCCGGCCGCTCTCCCTTAGTCCGCATTCGCTCCAGGGTTTTGGGACCCTAGGTTGCGGAGTCCTTACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511633.5
ENST00000512193.5
CDS CCA 90 bp GGCCAGGGTAGGGTAAGGACTCCGCAACCTAGGGTCCCAAAACCCTaGAGCGAATGCGGACTAAGGGAGAGCGGCCGGCGCGTCACCGGC +
Preference number: 5 (lower is better)
Translates to: GQGRVRTPQPRVPKP*SECGLRESGRRVTG
Trigger: GCCGGTGACGCGCCGGCCGCTCTCCCTTAGTCCGCATTCGCTCCAGGGTTTTGGGACCCTAGGTTGCGGAGTCCTTACCCTACCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511633.5
ENST00000512193.5
CDS GCA 90 bp GCGGGGTGGGGACGGGCGGCGTTCGGGACTGGGAAGCTACTTGACTaGCACGTGCTCCTGCCTCGCAACAGCGGCTCTAGATTCCGAGTT +
Preference number: 5 (lower is better)
Translates to: AGWGRAAFGTGKLLD*HVLLPRNSGSRFRV
Trigger: AACTCGGAATCTAGAGCCGCTGTTGCGAGGCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTCCCGAACGCCGCCCGTCCCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510108.1
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS CCA 90 bp GCCTCTCCAACTTCACAGAGGTCGTTGCTAGTGGCCACGGCGGGGTaGGGACGGGCGGCGTTCGGGACTGGGAAGCTACTTGACTGCCAC +
Preference number: 5 (lower is better)
Translates to: ASPTSQRSLLVATAG*GRAAFGTGKLLDCH
Trigger: GTGGCAGTCAAGTAGCTTCCCAGTCCCGAACGCCGCCCGTCCCCACCCCGCCGTGGCCACTAGCAACGACCTCTGTGAAGTTGGAGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510108.1
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS GCA 90 bp GGGGACGGGCGGCGTTCGGGACTGGGAAGCTACTTGACTGCCACGTaGTCCTGCCTCGCAACAGCGGCTCTAGATTCCGAGTTATGGGGA +
Preference number: 5 (lower is better)
Translates to: GDGRRSGLGSYLTAT*SCLATAALDSELWG
Trigger: TCCCCATAACTCGGAATCTAGAGCCGCTGTTGCGAGGCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTCCCGAACGCCGCCCGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510108.1
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS TCA 90 bp AGACTCTCCACACCTGACACTCGTCTTCAGTTGATACCACGGGTTTaGCTCCGTCCTGTCTCGGGCGACGCCCGTAAGACAGGTCGACAC +
Preference number: 5 (lower is better)
Translates to: RLSTPDTRLQLIPRV*LRPVSGDARKTGRH
Trigger: GTGTCGACCTGTCTTACGGGCGTCGCCCGAGACAGGACGGAGTCAAACCCGTGGTATCAACTGAAGACGAGTGTCAGGTGTGGAGAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439128.6
ENST00000510108.1
ENST00000510533.5
CDS TCA 90 bp AGCTCACAGTCCAGACTGAAAGGGGGCACTGAGACTCTCCACACCTaGCACTCGTCTTCAGTTGATACCACGGGTTTGACTCCGTCCTGT +
Preference number: 5 (lower is better)
Translates to: SSQSRLKGGTETLHT*HSSSVDTTGLTPSC
Trigger: ACAGGACGGAGTCAAACCCGTGGTATCAACTGAAGACGAGTGTCAGGTGTGGAGAGTCTCAGTGCCCCCTTTCAGTCTGGACTGTGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439128.6
ENST00000510108.1
ENST00000510533.5
CDS CCA 90 bp AGCATCAGGAAAATGGTGATGACCTGCAGCCCCATAAGGAAATCCTaGACGAACTCCAGGCAGAATTCCTCTTTCTGGAAGACCTCGACC +
Preference number: 5 (lower is better)
Translates to: SIRKMVMTCSPIRKS*TNSRQNSSFWKTST
Trigger: GGTCGAGGTCTTCCAGAAAGAGGAATTCTGCCTGGAGTTCGTCCAGGATTTCCTTATGGGGCTGCAGGTCATCACCATTTTCCTGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000509912.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTACTTCACAGAGGTCGTaGCTAGTGGCCACGGCGGGG +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFATSQRS*LVATAG
Trigger: CCCCGCCGTGGCCACTAGCAACGACCTCTGTGAAGT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTGGACTGGGAAGCTACTaGACTGCCACGTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAGLGSY*TATCSC
Trigger: GCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTCC...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTTTGGCTTCCCTCCTCTaGAAGAGCTGGGCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFALASLL*KSWACL
Trigger: GAGGCAGGCCCAGCTCTTCAAGAGGAGGGAAGCCAA...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507142.6
ENST00000511633.5
CDS GCA 90 bp TGTCCTTCGGCTCGAGCTTTATTCTGCATAGCTTCCCGTTTTCGCTaGAGGAACTCTTCTACTTGTTTAGCTCTTTCTACAGCTAGCTGC +
Preference number: 5 (lower is better)
Translates to: CPSARALFCIASRFR*RNSSTCLALSTASC
Trigger: GCAGCTAGCTGTAGAAAGAGCTAAACAAGTAGAAGAGTTCCTGCAGCGAAAACGGGAAGCTATGCAGAATAAAGCTCGAGCCGAAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS GCA 90 bp TTCTTCGTTCAGGGCACTTTCACTGCTGGGATTGTCATCTTCATCTaGCACATCTGTCCCATTTGCAGTTGGCTCCACATCACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: FFVQGTFTAGIVIFI*HICPICSWLHITVL
Trigger: AAGAACAGTGATGTGGAGCCAACTGCAAATGGGACAGATGTGGCAGATGAAGATGACAATCCCAGCAGTGAAAGTGCCCTGAACGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS GCA 90 bp CATCACTGTTATCTGAGTGCCATTCTTCGTTCAGGGCACTTTCACTaGTGGGATTGTCATCTTCATCTGCCACATCTGTCCCATTTGCAG +
Preference number: 5 (lower is better)
Translates to: HHCYLSAILRSGHFH*WDCHLHLPHLSHLQ
Trigger: CTGCAAATGGGACAGATGTGGCAGATGAAGATGACAATCCCAGCAGTGAAAGTGCCCTGAACGAAGAATGGCACTCAGATAACAGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATGGACTGGGAAGCTACTaGACTGCCACGTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHGLGSY*TATCSC
Trigger: GCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTCC...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACAGGACTGGGAAGCTACTaGACTGCCACGTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTGLGSY*TATCSC
Trigger: GCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTCC...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CAA 90 bp TTTTCTATCATGTACATGTTTCAGGGCCAAACATATCTGTACAAACCAGTCCAAGGACTGGGAAGCTACTaGACTGCCACGTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: FSIMYMFQGQTYLYKPVQGLGSY*TATCSC
Trigger: GCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTCC...TTGGACTGGTTTGTACAGATATGTTTGGCCCTGAAACATGTACATGATAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAGTTGATACCACGGGTTaGACTCCGTCCTGTCTCGGG +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQVDTTG*TPSCLG
Trigger: CCCGAGACAGGACGGAGTCAAACCCGTGGTATCAAC...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACAGTTGATACCACGGGTTaGACTCCGTCCTGTCTCGGG +
Preference number: 5 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTVDTTG*TPSCLG
Trigger: CCCGAGACAGGACGGAGTCAAACCCGTGGTATCAAC...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CAA 90 bp TTCTCCAATATGGAGTTGACTGATGGTCTATCCCTAGGATTTCTTTTAAATAACGTTGATACCACGGGTTaGACTCCGTCCTGTCTCGGG +
Preference number: 5 (lower is better)
Translates to: FSNMELTDGLSLGFLLNNVDTTG*TPSCLG
Trigger: CCCGAGACAGGACGGAGTCAAACCCGTGGTATCAAC...GTTATTTAAAAGAAATCCTAGGGATAGACCATCAGTCAACTCCATATTGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTGTTGATACCACGGGTTaGACTCCGTCCTGTCTCGGG +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGVDTTG*TPSCLG
Trigger: CCCGAGACAGGACGGAGTCAAACCCGTGGTATCAAC...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATCAGCAGCACGTGCATTaGCATGGGCCTTCAGTGATT +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHQQHVH*HGPSVI
Trigger: AATCACTGAAGGCCCATGCAAATGCACGTGCTGCTG...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTCCTGCCTCCCACTTCTaGCGATCAGATGAAACTGAT +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAPASHF*RSDETD
Trigger: ATCAGTTTCATCTGATCGCAAGAAGTGGGAGGCAGG...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTCTGTCCCATTTGCAGTaGGCTCCACATCACTGTTCT +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFALSHLQ*APHHCS
Trigger: AGAACAGTGATGTGGAGCCAACTGCAAATGGGACAG...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATCCACATCTGTCCCATTaGCAGTTGGCTCCACATCAC +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHPHLSH*QLAPHH
Trigger: GTGATGTGGAGCCAACTGCAAATGGGACAGATGTGG...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTGCCAACCAGCCTGCTTaGGACTCAGAGGTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAANQPA*DSEVQK
Trigger: TTTTTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGC...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTCATAGCTGCCAGGTTTaGCAGGATTCCCATATGTCC +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAHSCQV*QDSHMS
Trigger: GGACATATGGGAATCCTGCAAAACCTGGCAGCTATG...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507142.6
ENST00000511633.5
CDS TCA 90 bp GAGAAGGATGTATCTAGTGTTAACTCATCCAGAGGAATCACAAGTTaGCCTCCTGCCTCCCACTTCTTGCGATCAGATGAAACTGATTTT +
Preference number: 5 (lower is better)
Translates to: EKDVSSVNSSRGITS*PPASHFLRSDETDF
Trigger: AAAATCAGTTTCATCTGATCGCAAGAAGTGGGAGGCAGGAGGTCAACTTGTGATTCCTCTGGATGAGTTAACACTAGATACATCCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTCCTGTTTGCATTGGCTaGTTTAGACACCGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAPVCIG*FRHRLQ
Trigger: TTGAAGGCGGTGTCTAAACAAGCCAATGCAAACAGG...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000507142.6
CDS-3UTR CAA 90 bp GCTAATCGACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATTTTTGCCTGTTTGCATaGGCTTGTTTAGACACCGCC +
Preference number: 5 (lower is better)
Translates to: ANRLEMAQILLIILIPAHFCLFA*ACLDTA
Trigger: GGCGGTGTCTAAACAAGCCAATGCAAACAGGCAAAA...ATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGTCGATTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAACAGCAGCACGTGCATTaGCATGGGCCTTCAGTGATT +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQQQHVH*HGPSVI
Trigger: AATCACTGAAGGCCCATGCAAATGCACGTGCTGCTG...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAACAGAGGAATCACAAGTaGACCTCCTGCCTCCCACTT +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQQRNHK*TSCLPL
Trigger: AAGTGGGAGGCAGGAGGTCAACTTGTGATTCCTCTG...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACACCACATCTGTCCCATTaGCAGTTGGCTCCACATCAC +
Preference number: 5 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTPHLSH*QLAPHH
Trigger: GTGATGTGGAGCCAACTGCAAATGGGACAGATGTGG...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTCTTTCACTGCTGGGATaGTCATCTTCATCTGCCACA +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFALSLLG*SSSSAT
Trigger: TGTGGCAGATGAAGATGACAATCCCAGCAGTGAAAG...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATGCCAACCAGCCTGCTTaGGACTCAGAGGTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHANQPA*DSEVQK
Trigger: TTTTTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGC...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS GCA 90 bp ACTTCTTTCAAAGCTGAAGTTACAGAAATAACAGATCTCATCTGTTaGTTTGATGGAGAGCCACCTGTTTCATGCTGTCCCAAAGGTGGA +
Preference number: 5 (lower is better)
Translates to: TSFKAEVTEITDLIC*FDGEPPVSCCPKGG
Trigger: TCCACCTTTGGGACAGCATGAAACAGGTGGCTCTCCATCAAAGCAACAGATGAGATCTGTTATTTCTGTAACTTCAGCTTTGAAAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS-3UTR CAA 90 bp CCTATGCAAGTTCGAGCCAGCTCTACAGTACTATTAAGAACTCTAGCAATTCCATTCTCCAATATGGAGTaGACTGATGGTCTATCCCTA +
Preference number: 5 (lower is better)
Translates to: PMQVRASSTVLLRTLAIPFSNME*TDGLSL
Trigger: TAGGGATAGACCATCAGTCAACTCCATATTGGAGAA...TGGAATTGCTAGAGTTCTTAATAGTACTGTAGAGCTGGCTCGAACTTGCATAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTCACATTTCTCCATCCTaGTTCCCTGGCCCTATTTAT +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAHISPS*FPGPIY
Trigger: ATAAATAGGGCCAGGGAACAAGGATGGAGAAATGTG...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTCAGCAGCACGTGCATTaGCATGGGCCTTCAGTGATT +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGQQHVH*HGPSVI
Trigger: AATCACTGAAGGCCCATGCAAATGCACGTGCTGCTG...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGCAGCAGCACGTGCATTaGCATGGGCCTTCAGTGATT +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRQQHVH*HGPSVI
Trigger: AATCACTGAAGGCCCATGCAAATGCACGTGCTGCTG...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAACCTGCCTCCCACTTCTaGCGATCAGATGAAACTGAT +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQPASHF*RSDETD
Trigger: ATCAGTTTCATCTGATCGCAAGAAGTGGGAGGCAGG...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGCAGAGGAATCACAAGTaGACCTCCTGCCTCCCACTT +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRQRNHK*TSCLPL
Trigger: AAGTGGGAGGCAGGAGGTCAACTTGTGATTCCTCTG...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTCCAGTAATTAAGGGTTaGTACTTTTCCCCTTCGGGA +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAPVIKG*YFSPSG
Trigger: TCCCGAAGGGGAAAAGTACAAACCCTTAATTACTGG...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATGGCAAGCTCTCATCTTaGTTTGTTCCACTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHGKLSS*FVPLGS
Trigger: AGAGCCAAGTGGAACAAACAAAGATGAGAGCTTGCC...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTATGAATGTCACTAAGTaGGTCCACAGTACTCGAGAC +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAMNVTK*VHSTRD
Trigger: GTCTCGAGTACTGTGGACCAACTTAGTGACATTCAT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTCATCAAACAGACCAGTaGAAAGTCCAATCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAHQTDQ*KVQSAR
Trigger: CCTTGCTGATTGGACTTTCAACTGGTCTGTTTGATG...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAACTGTCCCATTTGCAGTaGGCTCCACATCACTGTTCT +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQLSHLQ*APHHCS
Trigger: AGAACAGTGATGTGGAGCCAACTGCAAATGGGACAG...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAGCCAACCAGCCTGCTTaGGACTCAGAGGTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQANQPA*DSEVQK
Trigger: TTTTTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGC...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS GCA 90 bp ATAACAAACGTTATCACTCAAATGAGGATGTCAATACAGAGGTTGTaGATGTGTGAGGAAGGGGTACATAGGAACTCTCTGTACTTTCCA +
Preference number: 5 (lower is better)
Translates to: ITNVITQMRMSIQRL*MCEEGVHRNSLYFP
Trigger: TGGAAAGTACAGAGAGTTCCTATGTACCCCTTCCTCACACATGCACAACCTCTGTATTGACATCCTCATTTGAGTGATAACGTTTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509912.5
CDS-3UTR CAA 90 bp TATGGGGTCCCTATGCAAGTTCGAGCCAGCTCTACAGTACTATTAAGAACTCTAGAGATGTTAATTTCCTaGATAACATACTGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: YGVPMQVRASSTVLLRTLEMLIS*ITYCLP
Trigger: TGGCAGACAGTATGTTATCAAGGAAATTAACATCTC...TAGAGTTCTTAATAGTACTGTAGAGCTGGCTCGAACTTGCATAGGGACCCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATCACATTTCTCCATCCTaGTTCCCTGGCCCTATTTAT +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHHISPS*FPGPIY
Trigger: ATAAATAGGGCCAGGGAACAAGGATGGAGAAATGTG...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTTTTCACCACGAAGTTaGGCTTTAATCTGTTGGCGC +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHFSPRS*ALICWR
Trigger: GCGCCAACAGATTAAAGCCAAACTTCGTGGTGAAAA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGCCTGCCTCCCACTTCTaGCGATCAGATGAAACTGAT +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRPASHF*RSDETD
Trigger: ATCAGTTTCATCTGATCGCAAGAAGTGGGAGGCAGG...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTCCTGCCTCCCACTTCTaGCGATCAGATGAAACTGAT +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGPASHF*RSDETD
Trigger: ATCAGTTTCATCTGATCGCAAGAAGTGGGAGGCAGG...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTAGCTCTCATCTTTGTTaGTTCCACTTGGCTCTTGTA +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFASSHLC*FHLALV
Trigger: TACAAGAGCCAAGTGGAACAAACAAAGATGAGAGCT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACAGGCAAGCTCTCATCTTaGTTTGTTCCACTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTGKLSS*FVPLGS
Trigger: AGAGCCAAGTGGAACAAACAAAGATGAGAGCTTGCC...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAGGCAAGCTCTCATCTTaGTTTGTTCCACTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQGKLSS*FVPLGS
Trigger: AGAGCCAAGTGGAACAAACAAAGATGAGAGCTTGCC...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATATGAATGTCACTAAGTaGGTCCACAGTACTCGAGAC +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHMNVTK*VHSTRD
Trigger: GTCTCGAGTACTGTGGACCAACTTAGTGACATTCAT...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp GCTAATCGACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATACATCTTTGGGTTGTTaGCATCAAACAGACCAGTTG +
Preference number: 5 (lower is better)
Translates to: ANRLEMAQILLIILIPAHTSLGC*HQTDQL
Trigger: CAACTGGTCTGTTTGATGCAAACAACCCAAAGATGT...ATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGTCGATTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTACATCTTTGGGTTGTTaGCATCAAACAGACCAGTTG +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFATSLGC*HQTDQL
Trigger: CAACTGGTCTGTTTGATGCAAACAACCCAAAGATGT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTCTGTCCCATTTGCAGTaGGCTCCACATCACTGTTCT +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGLSHLQ*APHHCS
Trigger: AGAACAGTGATGTGGAGCCAACTGCAAATGGGACAG...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGCTGTCCCATTTGCAGTaGGCTCCACATCACTGTTCT +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRLSHLQ*APHHCS
Trigger: AGAACAGTGATGTGGAGCCAACTGCAAATGGGACAG...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTTTCATCATTATCTTCTaGGTAGGCTCCATCTGCCAT +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAFIIIF*VGSICH
Trigger: ATGGCAGATGGAGCCTACCAAGAAGATAATGATGAA...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp GCTAATCGACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATTGCTTAAAGACTCCATaGAAAAACCACAGACAGGTC +
Preference number: 5 (lower is better)
Translates to: ANRLEMAQILLIILIPAHCLKTP*KNHRQV
Trigger: GACCTGTCTGTGGTTTTTCAATGGAGTCTTTAAGCA...ATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGTCGATTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CAA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACAGCCAACCAGCCTGCTTaGGACTCAGAGGTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITANQPA*DSEVQK
Trigger: TTTTTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGC...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS TCA 90 bp TATGCTAAAGGTATTCCATATTTAGCGGCAGGCTTTGTAATTTTCTaGGCAGGCATAACAGAAATCGAGTTTTGTCCTGAAGCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: YAKGIPYLAAGFVIF*AGITEIEFCPEAGL
Trigger: AAGACCAGCTTCAGGACAAAACTCGATTTCTGTTATGCCTGCTCAGAAAATTACAAAGCCTGCCGCTAAATATGGAATACCTTTAGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000439128.6
ENST00000505119.1
ENST00000507142.6
ENST00000509912.5
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTTGGATGCTTCATGTTaGCCAATACTGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHLDASC*PILQLL
Trigger: GAGAAGTTGCAGTATTGGCAAACATGAAGCATCCAA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACACCAGCCTTCTCTTTCTaGCTGCTTCCTCAGATATTT +
Preference number: 5 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTPAFSF*LLPQIF
Trigger: AAATATCTGAGGAAGCAGCAAGAAAGAGAAGGCTGG...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAACCAGCCTTCTCTTTCTaGCTGCTTCCTCAGATATTT +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQPAFSF*LLPQIF
Trigger: AAATATCTGAGGAAGCAGCAAGAAAGAGAAGGCTGG...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp GCTAATCGACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATTCTTTGTTGCTGCATTaGGTCAAAAATGGCATGGTA +
Preference number: 5 (lower is better)
Translates to: ANRLEMAQILLIILIPAHSLLLH*VKNGMV
Trigger: TACCATGCCATTTTTGACCAAATGCAGCAACAAAGA...ATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGTCGATTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CAA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACACCTGTTTGCATTGGCTaGTTTAGACACCGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITPVCIG*FRHRLQ
Trigger: TTGAAGGCGGTGTCTAAACAAGCCAATGCAAACAGG...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTTTTTGCCTGTTTGCATaGGCTTGTTTAGACACCGCC +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGFCLFA*ACLDTA
Trigger: GGCGGTGTCTAAACAAGCCAATGCAAACAGGCAAAA...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000507142.6
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATCAGGAACTCTTCTACTaGTTTAGCTCTTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHQELFY*FSSFYS
Trigger: GCTGTAGAAAGAGCTAAACAAGTAGAAGAGTTCCTG...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTTTATTTGCCTCAGTCTaGCCAGATAAACCATATGTC +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFALFASV*PDKPYV
Trigger: GACATATGGTTTATCTGGCAAGACTGAGGCAAATAA...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000510533.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTTTTGGCTTTAATCTGTaGGCGCTCATTGAAATTCTG +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAFGFNL*ALIEIL
Trigger: CAGAATTTCAATGAGCGCCAACAGATTAAAGCCAAA...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATTTTCACCACGAAGTTaGGCTTTAATCTGTTGGCGC +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQFSPRS*ALICWR
Trigger: GCGCCAACAGATTAAAGCCAAACTTCGTGGTGAAAA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAATCTCATCTGTTGCTTaGATGGAGAGCCACCTGTTT +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQISSVA*MESHLF
Trigger: AAACAGGTGGCTCTCCATCAAAGCAACAGATGAGAT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ACCTTACTGAAAAATAGCCCTTTTCCTCACTGGCATAATCTTTCCATAACAACAATCTCATCTGTTGCTTaGATGGAGAGCCACCTGTTT +
Preference number: 5 (lower is better)
Translates to: TLLKNSPFPHWHNLSITTISSVA*MESHLF
Trigger: AAACAGGTGGCTCTCCATCAAAGCAACAGATGAGAT...TGTTGTTATGGAAAGATTATGCCAGTGAGGAAAAGGGCTATTTTTCAGTAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAACCAGTAATTAAGGGTTaGTACTTTTCCCCTTCGGGA +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQPVIKG*YFSPSG
Trigger: TCCCGAAGGGGAAAAGTACAAACCCTTAATTACTGG...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTGGCAAGCTCTCATCTTaGTTTGTTCCACTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGGKLSS*FVPLGS
Trigger: AGAGCCAAGTGGAACAAACAAAGATGAGAGCTTGCC...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATGAAAAATGGTTCCGGTaGCACAGACTTATCTACATC +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHEKWFR*HRLIYI
Trigger: GATGTAGATAAGTCTGTGCAACCGGAACCATTTTTC...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTCTTAACATCTTTGGGTaGTTTGCATCAAACAGACCA +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFALNIFG*FASNRP
Trigger: TGGTCTGTTTGATGCAAACAACCCAAAGATGTTAAG...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTTATTTCAAGATTGTCTaGACGAACATCTCCTACGGT +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAYFKIV*TNISYG
Trigger: ACCGTAGGAGATGTTCGTCAAGACAATCTTGAAATA...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGCTTTCACTGCTGGGATaGTCATCTTCATCTGCCACA +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRLSLLG*SSSSAT
Trigger: TGTGGCAGATGAAGATGACAATCCCAGCAGTGAAAG...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTCTTTCACTGCTGGGATaGTCATCTTCATCTGCCACA +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGLSLLG*SSSSAT
Trigger: TGTGGCAGATGAAGATGACAATCCCAGCAGTGAAAG...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTTCATCATTATCTTCTaGGTAGGCTCCATCTGCCAT +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHFIIIF*VGSICH
Trigger: ATGGCAGATGGAGCCTACCAAGAAGATAATGATGAA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTGCTTAAAGACTCCATaGAAAAACCACAGACAGGTC +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHCLKTP*KNHRQV
Trigger: GACCTGTCTGTGGTTTTTCAATGGAGTCTTTAAGCA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTTATTTGCCTCAGTCTaGCCAGATAAACCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHLFASV*PDKPLP
Trigger: AGGAAGAGGTTTATCTGGCAAGACTGAGGCAAATAA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507142.6
ENST00000511633.5
CDS GCA 90 bp TTACACACATGGATGAATTCATGGATCATCACAGTCCAACCTGTTTaGATTGGCTTGTTTAGACACCGCCTTCAATCTTTTCAAAGTTTT +
Preference number: 5 (lower is better)
Translates to: LHTWMNSWIITVQPV*IGLFRHRLQSFQSF
Trigger: AAAACTTTGAAAAGATTGAAGGCGGTGTCTAAACAAGCCAATGCAAACAGGTTGGACTGTGATGATCCATGAATTCATCCATGTGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509912.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTTATACTGGACAATATTaGGATGCTTCATGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAYTGQY*DASCLP
Trigger: TGGCAAACATGAAGCATCCAAATATTGTCCAGTATA...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTTCCAAAATCTCCAAGTaGTACTGTTCCATCTTTAGT +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFASKISK*YCSIFS
Trigger: ACTAAAGATGGAACAGTACAACTTGGAGATTTTGGA...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATTCTCCAATATGGAGTaGACTGATGGTCTATCCCTA +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQFSNME*TDGLSL
Trigger: TAGGGATAGACCATCAGTCAACTCCATATTGGAGAA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATCTCTTCTCTGGAGTTaGATGGGCCTGTTTATGTTT +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQSLLWS*MGLFMF
Trigger: AAACATAAACAGGCCCATCAAACTCCAGAGAAGAGA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGCCAGCCTTCTCTTTCTaGCTGCTTCCTCAGATATTT +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRPAFSF*LLPQIF
Trigger: AAATATCTGAGGAAGCAGCAAGAAAGAGAAGGCTGG...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTCACATTTCTCCATCCTaGTTCCCTGGCCCTATTTAT +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGHISPS*FPGPIY
Trigger: ATAAATAGGGCCAGGGAACAAGGATGGAGAAATGTG...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTCTTTGTTGCTGCATTaGGTCAAAAATGGCATGGTA +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHSLLLH*VKNGMV
Trigger: TACCATGCCATTTTTGACCAAATGCAGCAACAAAGA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTATCTTCTGCTCTTTGTaGCTGCATTTGGTCAAAAAT +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAIFCSL*LHLVKN
Trigger: ATTTTTGACCAAATGCAGCAACAAAGAGCAGAAGAT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTATTATCTTCTGCTCTTaGTTGCTGCATTTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAIIFCS*LLHLVK
Trigger: TTTGACCAAATGCAGCAACAAAGAGCAGAAGATAAT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAACAGGAACTCTTCTACTaGTTTAGCTCTTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQQELFY*FSSFYS
Trigger: GCTGTAGAAAGAGCTAAACAAGTAGAAGAGTTCCTG...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CACAGACAGGTCCTTCATGACATAGGTAATTCCTTCAACCTAAAGACATTTGCTATCTGTTGGCGCTCATaGAAATTCTGTAGTCTTATT +
Preference number: 5 (lower is better)
Translates to: HRQVLHDIGNSFNLKTFAICWRS*KFCSLI
Trigger: AATAAGACTACAGAATTTCAATGAGCGCCAACAGAT...AGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTTTTTCACCACGAAGTTaGGCTTTAATCTGTTGGCGC +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGFSPRS*ALICWR
Trigger: GCGCCAACAGATTAAAGCCAAACTTCGTGGTGAAAA...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAACTCTTCACTTCCTTCTaGTCCTTCAGAATGATTAGC +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQLFTSF*SFRMIS
Trigger: GCTAATCATTCTGAAGGACAAGAAGGAAGTGAAGAG...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGATCTCATCTGTTGCTTaGATGGAGAGCCACCTGTTT +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRISSVA*MESHLF
Trigger: AAACAGGTGGCTCTCCATCAAAGCAACAGATGAGAT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTCCAGTAATTAAGGGTTaGTACTTTTCCCCTTCGGGA +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGPVIKG*YFSPSG
Trigger: TCCCGAAGGGGAAAAGTACAAACCCTTAATTACTGG...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAAGCTCTCATCTTTGTTaGTTCCACTTGGCTCTTGTA +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQSSHLC*FHLALV
Trigger: TACAAGAGCCAAGTGGAACAAACAAAGATGAGAGCT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAGAAAAATGGTTCCGGTaGCACAGACTTATCTACATC +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQEKWFR*HRLIYI
Trigger: GATGTAGATAAGTCTGTGCAACCGGAACCATTTTTC...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGCATCAAACAGACCAGTaGAAAGTCCAATCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRHQTDQ*KVQSAR
Trigger: CCTTGCTGATTGGACTTTCAACTGGTCTGTTTGATG...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTCATCAAACAGACCAGTaGAAAGTCCAATCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGHQTDQ*KVQSAR
Trigger: CCTTGCTGATTGGACTTTCAACTGGTCTGTTTGATG...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATCTTAACATCTTTGGGTaGTTTGCATCAAACAGACCA +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHLNIFG*FASNRP
Trigger: TGGTCTGTTTGATGCAAACAACCCAAAGATGTTAAG...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATTCATCATTATCTTCTaGGTAGGCTCCATCTGCCAT +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQFIIIF*VGSICH
Trigger: ATGGCAGATGGAGCCTACCAAGAAGATAATGATGAA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATGCTTAAAGACTCCATaGAAAAACCACAGACAGGTC +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQCLKTP*KNHRQV
Trigger: GACCTGTCTGTGGTTTTTCAATGGAGTCTTTAAGCA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATGAGATGTTAATTTCCTaGATAACATACTGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHEMLIS*ITYCLP
Trigger: TGGCAGACAGTATGTTATCAAGGAAATTAACATCTC...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGTTGGATGCTTCATGTTaGCCAATACTGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRLDASC*PILQLL
Trigger: GAGAAGTTGCAGTATTGGCAAACATGAAGCATCCAA...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACATTGGATGCTTCATGTTaGCCAATACTGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITLDASC*PILQLL
Trigger: GAGAAGTTGCAGTATTGGCAAACATGAAGCATCCAA...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTATACTGGACAATATTaGGATGCTTCATGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHYTGQY*DASCLP
Trigger: TGGCAAACATGAAGCATCCAAATATTGTCCAGTATA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATTCCAAAATCTCCAAGTaGTACTGTTCCATCTTTAGT +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHSKISK*YCSIFS
Trigger: ACTAAAGATGGAACAGTACAACTTGGAGATTTTGGA...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGTTCTCCAATATGGAGTaGACTGATGGTCTATCCCTA +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRFSNME*TDGLSL
Trigger: TAGGGATAGACCATCAGTCAACTCCATATTGGAGAA...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CTGGTAAAACACAGAAGGAGGACATTCCTTGGTAACTTAATAAAAGTAATCCTATTCTCCAATATGGAGTaGACTGATGGTCTATCCCTA +
Preference number: 5 (lower is better)
Translates to: LVKHRRRTFLGNLIKVILFSNME*TDGLSL
Trigger: TAGGGATAGACCATCAGTCAACTCCATATTGGAGAA...TAGGATTACTTTTATTAAGTTACCAAGGAATGTCCTCCTTCTGTGTTTTACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505119.1
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGTCTCTTCTCTGGAGTTaGATGGGCCTGTTTATGTTT +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRSLLWS*MGLFMF
Trigger: AAACATAAACAGGCCCATCAAACTCCAGAGAAGAGA...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTTCTCTTCTCTGGAGTTaGATGGGCCTGTTTATGTTT +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGSLLWS*MGLFMF
Trigger: AAACATAAACAGGCCCATCAAACTCCAGAGAAGAGA...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATCTTTGTTGCTGCATTaGGTCAAAAATGGCATGGTA +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQSLLLH*VKNGMV
Trigger: TACCATGCCATTTTTGACCAAATGCAGCAACAAAGA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGCAGGAACTCTTCTACTaGTTTAGCTCTTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRQELFY*FSSFYS
Trigger: GCTGTAGAAAGAGCTAAACAAGTAGAAGAGTTCCTG...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTCAGGAACTCTTCTACTaGTTTAGCTCTTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGQELFY*FSSFYS
Trigger: GCTGTAGAAAGAGCTAAACAAGTAGAAGAGTTCCTG...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATATCTGTTGGCGCTCATaGAAATTCTGTAGTCTTATT +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHICWRS*KFCSLI
Trigger: AATAAGACTACAGAATTTCAATGAGCGCCAACAGAT...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATTTGGCTTTAATCTGTaGGCGCTCATTGAAATTCTG +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQFGFNL*ALIEIL
Trigger: CAGAATTTCAATGAGCGCCAACAGATTAAAGCCAAA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACACTCTTCACTTCCTTCTaGTCCTTCAGAATGATTAGC +
Preference number: 5 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITLFTSF*SFRMIS
Trigger: GCTAATCATTCTGAAGGACAAGAAGGAAGTGAAGAG...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAACTTTGTTTGTTCCACTaGGCTCTTGTAGAATTTCTG +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQLCLFH*ALVEFL
Trigger: CAGAAATTCTACAAGAGCCAAGTGGAACAAACAAAG...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGAGCTCTCATCTTTGTTaGTTCCACTTGGCTCTTGTA +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRSSHLC*FHLALV
Trigger: TACAAGAGCCAAGTGGAACAAACAAAGATGAGAGCT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTAGCTCTCATCTTTGTTaGTTCCACTTGGCTCTTGTA +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGSSHLC*FHLALV
Trigger: TACAAGAGCCAAGTGGAACAAACAAAGATGAGAGCT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTGAAAAATGGTTCCGGTaGCACAGACTTATCTACATC +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGEKWFR*HRLIYI
Trigger: GATGTAGATAAGTCTGTGCAACCGGAACCATTTTTC...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGACATCTTTGGGTTGTTaGCATCAAACAGACCAGTTG +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRTSLGC*HQTDQL
Trigger: CAACTGGTCTGTTTGATGCAAACAACCCAAAGATGT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTACATCTTTGGGTTGTTaGCATCAAACAGACCAGTTG +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGTSLGC*HQTDQL
Trigger: CAACTGGTCTGTTTGATGCAAACAACCCAAAGATGT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATATGTCCTTAACATCTTaGGGTTGTTTGCATCAAACA +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHMSLTS*GCLHQT
Trigger: TGTTTGATGCAAACAACCCAAAGATGTTAAGGACAT...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTTTCATCATTATCTTCTaGGTAGGCTCCATCTGCCAT +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGFIIIF*VGSICH
Trigger: ATGGCAGATGGAGCCTACCAAGAAGATAATGATGAA...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAGCCTGCTTTGGACTCAGAGGTTCAAAAACTTTGCTTTTATTACGAAGAACATAACATCTTATTGTCCTaGAAGCTTATGTATGGAGGA +
Preference number: 5 (lower is better)
Translates to: QPALDSEVQKLCFYYEEHNILLS*KLMYGG
Trigger: TCCTCCATACATAAGCTTCAAGGACAATAAGATGTT...ATGTTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTTTATTTGCCTCAGTCTaGCCAGATAAACCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGLFASV*PDKPLP
Trigger: AGGAAGAGGTTTATCTGGCAAGACTGAGGCAAATAA...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507142.6
ENST00000511633.5
CDS TCA 90 bp TTGAGGATTATTCATCATTATCTTCTTGGTAGGCTCCATCTGCCATaGCTAAATGAAGAATCTTGGCATAAAGATGCTGATGTTCATTTC +
Preference number: 5 (lower is better)
Translates to: LRIIHHYLLGRLHLP*LNEESWHKDADVHF
Trigger: GAAATGAACATCAGCATCTTTATGCCAAGATTCTTCATTTAGTCATGGCAGATGGAGCCTACCAAGAAGATAATGATGAATAATCCTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS GCA 90 bp GAGCCATTTTCTTCAAATGATTCTCTATACTGGACAATATTTGGATaGTTCATGTTTGCCAATACTGCAACTTCTCTCCTTGATTCTTCT +
Preference number: 5 (lower is better)
Translates to: EPFSSNDSLYWTIFG*FMFANTATSLLDSS
Trigger: AGAAGAATCAAGGAGAGAAGTTGCAGTATTGGCAAACATGAAGCATCCAAATATTGTCCAGTATAGAGAATCATTTGAAGAAAATGGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAATCCAAAATCTCCAAGTaGTACTGTTCCATCTTTAGT +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQSKISK*YCSIFS
Trigger: ACTAAAGATGGAACAGTACAACTTGGAGATTTTGGA...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp TTTTCTATCATGTACATGTTTCAGGGCCAAACATATCTGTACAAACCAGTCCAATCCAAAATCTCCAAGTaGTACTGTTCCATCTTTAGT +
Preference number: 5 (lower is better)
Translates to: FSIMYMFQGQTYLYKPVQSKISK*YCSIFS
Trigger: ACTAAAGATGGAACAGTACAACTTGGAGATTTTGGA...TTGGACTGGTTTGTACAGATATGTTTGGCCCTGAAACATGTACATGATAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510108.1
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTTCTTTGTTGCTGCATTaGGTCAAAAATGGCATGGTA +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGSLLLH*VKNGMV
Trigger: TACCATGCCATTTTTGACCAAATGCAGCAACAAAGA...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAATTATCTTCTGCTCTTaGTTGCTGCATTTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQIIFCS*LLHLVK
Trigger: TTTGACCAAATGCAGCAACAAAGAGCAGAAGATAAT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTTTATTTGCCTCAGTCTaGCCAGATAAACCATATGTC +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGLFASV*PDKPYV
Trigger: GACATATGGTTTATCTGGCAAGACTGAGGCAAATAA...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439128.6
ENST00000510533.5
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAATCTGTTGGCGCTCATaGAAATTCTGTAGTCTTATT +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQICWRS*KFCSLI
Trigger: AATAAGACTACAGAATTTCAATGAGCGCCAACAGAT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGTTTGGCTTTAATCTGTaGGCGCTCATTGAAATTCTG +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRFGFNL*ALIEIL
Trigger: CAGAATTTCAATGAGCGCCAACAGATTAAAGCCAAA...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTTTTGGCTTTAATCTGTaGGCGCTCATTGAAATTCTG +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGFGFNL*ALIEIL
Trigger: CAGAATTTCAATGAGCGCCAACAGATTAAAGCCAAA...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGCTTTGTTTGTTCCACTaGGCTCTTGTAGAATTTCTG +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRLCLFH*ALVEFL
Trigger: CAGAAATTCTACAAGAGCCAAGTGGAACAAACAAAG...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACACTTTGTTTGTTCCACTaGGCTCTTGTAGAATTTCTG +
Preference number: 5 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITLCLFH*ALVEFL
Trigger: CAGAAATTCTACAAGAGCCAAGTGGAACAAACAAAG...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTCTTTGTTTGTTCCACTaGGCTCTTGTAGAATTTCTG +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGLCLFH*ALVEFL
Trigger: CAGAAATTCTACAAGAGCCAAGTGGAACAAACAAAG...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTTATTTCAAGATTGTCTaGACGAACATCTCCTACGGT +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGYFKIV*TNISYG
Trigger: ACCGTAGGAGATGTTCGTCAAGACAATCTTGAAATA...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACATATTTCAAGATTGTCTaGACGAACATCTCCTACGGT +
Preference number: 5 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITYFKIV*TNISYG
Trigger: ACCGTAGGAGATGTTCGTCAAGACAATCTTGAAATA...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CAA 90 bp ATTTTTCAAATTACATATTATGCCAACCAGCCTGCTTTGGACTCAGAGGTTCAAAACATCTTATTGTCCTaGAAGCTTATGTATGGAGGA +
Preference number: 5 (lower is better)
Translates to: IFQITYYANQPALDSEVQNILLS*KLMYGG
Trigger: TCCTCCATACATAAGCTTCAAGGACAATAAGATGTT...TTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTGAGATGTTAATTTCCTaGATAACATACTGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGEMLIS*ITYCLP
Trigger: TGGCAGACAGTATGTTATCAAGGAAATTAACATCTC...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGGAGATGTTAATTTCCTaGATAACATACTGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNREMLIS*ITYCLP
Trigger: TGGCAGACAGTATGTTATCAAGGAAATTAACATCTC...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGTATACTGGACAATATTaGGATGCTTCATGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRYTGQY*DASCLP
Trigger: TGGCAAACATGAAGCATCCAAATATTGTCCAGTATA...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGATCTTCTGCTCTTTGTaGCTGCATTTGGTCAAAAAT +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRIFCSL*LHLVKN
Trigger: ATTTTTGACCAAATGCAGCAACAAAGAGCAGAAGAT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTATCTTCTGCTCTTTGTaGCTGCATTTGGTCAAAAAT +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGIFCSL*LHLVKN
Trigger: ATTTTTGACCAAATGCAGCAACAAAGAGCAGAAGAT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGATTATCTTCTGCTCTTaGTTGCTGCATTTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRIIFCS*LLHLVK
Trigger: TTTGACCAAATGCAGCAACAAAGAGCAGAAGATAAT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp ACTGGAGATGGCACAAATCTTATTGATCATCCTTATTCCTGCACATATATAACAATTATCTTCTGCTCTTaGTTGCTGCATTTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: TGDGTNLIDHPYSCTYITIIFCS*LLHLVK
Trigger: TTTGACCAAATGCAGCAACAAAGAGCAGAAGATAAT...TGTTATATATGTGCAGGAATAAGGATGATCAATAAGATTTGTGCCATCTCCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CAA 90 bp CAACATCTTAATGACCTAACTAAATCCTCTCATAACAGAAAGAAGTTCAACAGGATGTCCTTAACATCTTaGGGTTGTTTGCATCAAACA +
Preference number: 5 (lower is better)
Translates to: QHLNDLTKSSHNRKKFNRMSLTS*GCLHQT
Trigger: TGTTTGATGCAAACAACCCAAAGATGTTAAGGACAT...CCTGTTGAACTTCTTTCTGTTATGAGAGGATTTAGTTAGGTCATTAAGATGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTATGTCCTTAACATCTTaGGGTTGTTTGCATCAAACA +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGMSLTS*GCLHQT
Trigger: TGTTTGATGCAAACAACCCAAAGATGTTAAGGACAT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTAACATCTTATTGTCCTaGAAGCTTATGTATGGAGGA +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGNILLS*KLMYGG
Trigger: TCCTCCATACATAAGCTTCAAGGACAATAAGATGTT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
CDS-3UTR CAA 90 bp AAAGTTACCCTATTGCATAGTAAATCTTCAAAACCATTAAGTCAGGTTCTGGGTATGGCACAAATCTTATaGATCATCCTTATTCCTGCA +
Preference number: 5 (lower is better)
Translates to: KVTLLHSKSSKPLSQVLGMAQIL*IILIPA
Trigger: TGCAGGAATAAGGATGATCAATAAGATTTGTGCCAT...ACCCAGAACCTGACTTAATGGTTTTGAAGATTTACTATGCAATAGGGTAACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507142.6
CDS-3UTR CAA 90 bp CTGGTAAAACACAGAAGGAGGACATTCCTTGGTAACTTAATAAAAGTAATCCTAATGGCTCTGCTTAGGTaGCTCAAAAGTTATTTCATT +
Preference number: 5 (lower is better)
Translates to: LVKHRRRTFLGNLIKVILMALLR*LKSYFI
Trigger: AATGAAATAACTTTTGAGCAACCTAAGCAGAGCCAT...TAGGATTACTTTTATTAAGTTACCAAGGAATGTCCTCCTTCTGTGTTTTACCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505119.1
CDS CAA 90 bp CCACGGCGGGGTGGGGACGGGCGGCGTTCGGGACTGGGAAGCTACTaGACTGCCACGTGCTCCTGCCTCGCAACAGCGGCTCTAGATTCC +
Preference number: 6 (lower is better)
Translates to: PRRGGDGRRSGLGSY*TATCSCLATAALDS
Trigger: GGAATCTAGAGCCGCTGTTGCGAGGCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTCCCGAACGCCGCCCGTCCCCACCCCGCCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510108.1
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS TCA 72 bp GTGGGGACGGGCGGCGTTCGGGACTGGGAAGCTACTTaGCTGCCACGTGCTCCTGCCTCGCAACAGCGGCTC +
Preference number: 6 (lower is better)
Translates to: VGTGGVRDWEAT*LPRAPASQQRL
Trigger: GAGCCGCTGTTGCGAGGCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTCCCGAACGCCGCCCGTCCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510108.1
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS CAA 72 bp GGTGGGGACGGGCGGCGTTCGGGACTGGGAAGCTACTaGACTGCCACGTGCTCCTGCCTCGCAACAGCGGCT +
Preference number: 6 (lower is better)
Translates to: GGDGRRSGLGSY*TATCSCLATAA
Trigger: AGCCGCTGTTGCGAGGCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTCCCGAACGCCGCCCGTCCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510108.1
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS GCA 72 bp GGACGGGCGGCGTTCGGGACTGGGAAGCTACTTGACTaGCACGTGCTCCTGCCTCGCAACAGCGGCTCTAGA +
Preference number: 6 (lower is better)
Translates to: GRAAFGTGKLLD*HVLLPRNSGSR
Trigger: TCTAGAGCCGCTGTTGCGAGGCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTCCCGAACGCCGCCCGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510108.1
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS CCA 72 bp ACTTCACAGAGGTCGTTGCTAGTGGCCACGGCGGGGTaGGGACGGGCGGCGTTCGGGACTGGGAAGCTACTT +
Preference number: 6 (lower is better)
Translates to: TSQRSLLVATAG*GRAAFGTGKLL
Trigger: AAGTAGCTTCCCAGTCCCGAACGCCGCCCGTCCCCACCCCGCCGTGGCCACTAGCAACGACCTCTGTGAAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510108.1
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS GCA 72 bp CGGCGTTCGGGACTGGGAAGCTACTTGACTGCCACGTaGTCCTGCCTCGCAACAGCGGCTCTAGATTCCGAG +
Preference number: 6 (lower is better)
Translates to: RRSGLGSYLTAT*SCLATAALDSE
Trigger: CTCGGAATCTAGAGCCGCTGTTGCGAGGCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTCCCGAACGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510108.1
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS GCA 72 bp TCGGGACTGGGAAGCTACTTGACTGCCACGTGCTCCTaGCTCGCAACAGCGGCTCTAGATTCCGAGTTATGG +
Preference number: 6 (lower is better)
Translates to: SGLGSYLTATCS*LATAALDSELW
Trigger: CCATAACTCGGAATCTAGAGCCGCTGTTGCGAGGCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTCCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510108.1
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS TCA 72 bp ACACCTGACACTCGTCTTCAGTTGATACCACGGGTTTaGCTCCGTCCTGTCTCGGGCGACGCCCGTAAGACA +
Preference number: 6 (lower is better)
Translates to: TPDTRLQLIPRV*LRPVSGDARKT
Trigger: TGTCTTACGGGCGTCGCCCGAGACAGGACGGAGTCAAACCCGTGGTATCAACTGAAGACGAGTGTCAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439128.6
ENST00000510108.1
ENST00000510533.5
CDS TCA 72 bp CATCCTGACACTCGTCTTCAGTTGATACCACGGGTTTaGCTCCGTCCTGTCTCGGGCGACGCCCGTAAGACA +
Preference number: 6 (lower is better)
Translates to: HPDTRLQLIPRV*LRPVSGDARKT
Trigger: TGTCTTACGGGCGTCGCCCGAGACAGGACGGAGTCAAACCCGTGGTATCAACTGAAGACGAGTGTCAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507142.6
ENST00000511633.5
ENST00000512193.5
CDS TCA 72 bp TCCAGACTGAAAGGGGGCACTGAGACTCTCCACACCTaGCACTCGTCTTCAGTTGATACCACGGGTTTGACT +
Preference number: 6 (lower is better)
Translates to: SRLKGGTETLHT*HSSSVDTTGLT
Trigger: AGTCAAACCCGTGGTATCAACTGAAGACGAGTGTCAGGTGTGGAGAGTCTCAGTGCCCCCTTTCAGTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439128.6
ENST00000510108.1
ENST00000510533.5
CDS CAA 90 bp TTATCTGAGTGCCATTCTTCGTTCAGGGCACTTTCACTGCTGGGATaGTCATCTTCATCTGCCACATCTGTCCCATTTGCAGTTGGCTCC +
Preference number: 6 (lower is better)
Translates to: LSECHSSFRALSLLG*SSSSATSVPFAVGS
Trigger: GGAGCCAACTGCAAATGGGACAGATGTGGCAGATGAAGATGACAATCCCAGCAGTGAAAGTGCCCTGAACGAAGAATGGCACTCAGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS GCA 72 bp TATCTGAGTGCCATTCTTCGTTCAGGGCACTTTCACTaGTGGGATTGTCATCTTCATCTGCCACATCTGTCC +
Preference number: 6 (lower is better)
Translates to: YLSAILRSGHFH*WDCHLHLPHLS
Trigger: GGACAGATGTGGCAGATGAAGATGACAATCCCAGCAGTGAAAGTGCCCTGAACGAAGAATGGCACTCAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS CCA 72 bp AAAATGGTGATGACCTGCAGCCCCATAAGGAAATCCTaGACGAACTCCAGGCAGAATTCCTCTTTCTGGAAG +
Preference number: 6 (lower is better)
Translates to: KMVMTCSPIRKS*TNSRQNSSFWK
Trigger: CTTCCAGAAAGAGGAATTCTGCCTGGAGTTCGTCCAGGATTTCCTTATGGGGCTGCAGGTCATCACCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000509912.5
CDS CAA 72 bp TGCCATTCTTCGTTCAGGGCACTTTCACTGCTGGGATaGTCATCTTCATCTGCCACATCTGTCCCATTTGCA +
Preference number: 6 (lower is better)
Translates to: CHSSFRALSLLG*SSSSATSVPFA
Trigger: TGCAAATGGGACAGATGTGGCAGATGAAGATGACAATCCCAGCAGTGAAAGTGCCCTGAACGAAGAATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS GCA 72 bp CTCATCTGTTGCTTTGATGGAGAGCCACCTGTTTCATaGTGTCCCAAAGGTGGAGAAACATCAGAACTCTTA +
Preference number: 6 (lower is better)
Translates to: LICCFDGEPPVS*CPKGGETSELL
Trigger: TAAGAGTTCTGATGTTTCTCCACCTTTGGGACAGCATGAAACAGGTGGCTCTCCATCAAAGCAACAGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS GCA 72 bp CATTCACTAGCAATTTCACCATCACTGTTATCTGAGTaGCATTCTTCGTTCAGGGCACTTTCACTGCTGGGA +
Preference number: 6 (lower is better)
Translates to: HSLAISPSLLSE*HSSFRALSLLG
Trigger: TCCCAGCAGTGAAAGTGCCCTGAACGAAGAATGGCACTCAGATAACAGTGATGGTGAAATTGCTAGTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS TCA 72 bp ATGGTAATGTTCATACTGTCCTCGAGAAGAAAAAGATaGTGGAGCTATAGTCCCTCCACTGCCCAGAAAAGG +
Preference number: 6 (lower is better)
Translates to: MVMFILSSRRKR*WSYSPSTAQKR
Trigger: CCTTTTCTGGGCAGTGGAGGGACTATAGCTCCATCATCTTTTTCTTCTCGAGGACAGTATGAACATTACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000509912.5
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS GCA 72 bp GCTCGAGCTTTATTCTGCATAGCTTCCCGTTTTCGCTaGAGGAACTCTTCTACTTGTTTAGCTCTTTCTACA +
Preference number: 6 (lower is better)
Translates to: ARALFCIASRFR*RNSSTCLALST
Trigger: TGTAGAAAGAGCTAAACAAGTAGAAGAGTTCCTGCAGCGAAAACGGGAAGCTATGCAGAATAAAGCTCGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS GCA 72 bp GTTATCACTCAAATGAGGATGTCAATACAGAGGTTGTaGATGTGTGAGGAAGGGGTACATAGGAACTCTCTG +
Preference number: 6 (lower is better)
Translates to: VITQMRMSIQRL*MCEEGVHRNSL
Trigger: CAGAGAGTTCCTATGTACCCCTTCCTCACACATGCACAACCTCTGTATTGACATCCTCATTTGAGTGATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509912.5
CDS GCA 72 bp AAAGCTGAAGTTACAGAAATAACAGATCTCATCTGTTaGTTTGATGGAGAGCCACCTGTTTCATGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: KAEVTEITDLIC*FDGEPPVSCCP
Trigger: GGGACAGCATGAAACAGGTGGCTCTCCATCAAAGCAACAGATGAGATCTGTTATTTCTGTAACTTCAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS GCA 72 bp CAAGACACAAAAATCAGGCTGAACTGGAAAGCTACATaGTTTCAGAGTAATCAAGGGCCAAATTTGCACCTC +
Preference number: 6 (lower is better)
Translates to: QDTKIRLNWKAT*FQSNQGPNLHL
Trigger: GAGGTGCAAATTTGGCCCTTGATTACTCTGAAAGCATGTAGCTTTCCAGTTCAGCCTGATTTTTGTGTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509912.5
CDS CAA 72 bp TCACCACGAAGTTTGGCTTTAATCTGTTGGCGCTCATaGAAATTCTGTAGTCTTATTTGCCTCAGTCTTGCC +
Preference number: 6 (lower is better)
Translates to: SPRSLALICWRS*KFCSLICLSLA
Trigger: GGCAAGACTGAGGCAAATAAGACTACAGAATTTCAATGAGCGCCAACAGATTAAAGCCAAACTTCGTGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS CAA 72 bp ATCATTGGTTCCAGGCTCTATATGAATGTCACTAAGTaGGTCCACAGTACTCGAGACTCCATCTTCAGAAAC +
Preference number: 6 (lower is better)
Translates to: IIGSRLYMNVTK*VHSTRDSIFRN
Trigger: GTTTCTGAAGATGGAGTCTCGAGTACTGTGGACCAACTTAGTGACATTCATATAGAGCCTGGAACCAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS GCA 72 bp TGGATGAATTCATGGATCATCACAGTCCAACCTGTTTaGATTGGCTTGTTTAGACACCGCCTTCAATCTTTT +
Preference number: 6 (lower is better)
Translates to: WMNSWIITVQPV*IGLFRHRLQSF
Trigger: AAAAGATTGAAGGCGGTGTCTAAACAAGCCAATGCAAACAGGTTGGACTGTGATGATCCATGAATTCATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509912.5
CDS CCA 72 bp TTTTTCCTCACTAATCCACACATCAGTAATAGTGCATaGCAAGCTCTCATCTTTGTTTGTTCCACTTGGCTC +
Preference number: 6 (lower is better)
Translates to: FFLTNPHISNSA*QALIFVCSTWL
Trigger: GAGCCAAGTGGAACAAACAAAGATGAGAGCTTGCCATGCACTATTACTGATGTGTGGATTAGTGAGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS CAA 90 bp GGAGGGAGGTGGAGCACAGGGGATTTTGAAGGCAGTCACATTATTTaGTATGATATTACAGTGGTGGATACCTATAATTATACATTCGTC +
Preference number: 6 (lower is better)
Translates to: GGRWSTGDFEGSHII*YDITVVDTYNYTFV
Trigger: GACGAATGTATAATTATAGGTATCCACCACTGTAATATCATACAAAATAATGTGACTGCCTTCAAAATCCCCTGTGCTCCACCTCCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509912.5
CDS CAA 90 bp ATCATAACAAACGTTATCACTCAAATGAGGATGTCAATACAGAGGTaGTGCATGTGTGAGGAAGGGGTACATAGGAACTCTCTGTACTTT +
Preference number: 6 (lower is better)
Translates to: IITNVITQMRMSIQR*CMCEEGVHRNSLYF
Trigger: AAAGTACAGAGAGTTCCTATGTACCCCTTCCTCACACATGCACAACCTCTGTATTGACATCCTCATTTGAGTGATAACGTTTGTTATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509912.5
CDS TCA 72 bp AGACTCCATCTTCAGAAACTTCATTTTCCTGAATGGTaGTCCTATCTGCCGACTGAGTTTCCTTTGTTTCTT +
Preference number: 6 (lower is better)
Translates to: RLHLQKLHFPEW*SYLPTEFPLFL
Trigger: AAGAAACAAAGGAAACTCAGTCGGCAGATAGGATCACCATTCAGGAAAATGAAGTTTCTGAAGATGGAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS TCA 72 bp CAGTCTAAACCCACAAACAAGACACAAAAATCAGGCTaGACTGGAAAGCTACATGCTTTCAGAGTAATCAAG +
Preference number: 6 (lower is better)
Translates to: QSKPTNKTQKSG*TGKLHAFRVIK
Trigger: CTTGATTACTCTGAAAGCATGTAGCTTTCCAGTTCAGCCTGATTTTTGTGTCTTGTTTGTGGGTTTAGACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509912.5
CDS CAA 72 bp CACACATCAGTAATAGTGCATGGCAAGCTCTCATCTTaGTTTGTTCCACTTGGCTCTTGTAGAATTTCTGTT +
Preference number: 6 (lower is better)
Translates to: HTSVIVHGKLSS*FVPLGSCRISV
Trigger: AACAGAAATTCTACAAGAGCCAAGTGGAACAAACAAAGATGAGAGCTTGCCATGCACTATTACTGATGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS CAA 72 bp TTCAGAATGAACCACCTTATGGAAAAATGGTTCCGGTaGCACAGACTTATCTACATCACATTTAGAGTGCTG +
Preference number: 6 (lower is better)
Translates to: FRMNHLMEKWFR*HRLIYITFRVL
Trigger: CAGCACTCTAAATGTGATGTAGATAAGTCTGTGCAACCGGAACCATTTTTCCATAAGGTGGTTCATTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS CAA 72 bp TCATGGATCATCACAGTCCAACCTGTTTGCATTGGCTaGTTTAGACACCGCCTTCAATCTTTTCAAAGTTTT +
Preference number: 6 (lower is better)
Translates to: SWIITVQPVCIG*FRHRLQSFQSF
Trigger: AAAACTTTGAAAAGATTGAAGGCGGTGTCTAAACAAGCCAATGCAAACAGGTTGGACTGTGATGATCCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509912.5
CDS CAA 90 bp TCACTAATCCACACATCAGTAATAGTGCATGGCAAGCTCTCATCTTaGTTTGTTCCACTTGGCTCTTGTAGAATTTCTGTTTCCAAATCA +
Preference number: 6 (lower is better)
Translates to: SLIHTSVIVHGKLSS*FVPLGSCRISVSKS
Trigger: TGATTTGGAAACAGAAATTCTACAAGAGCCAAGTGGAACAAACAAAGATGAGAGCTTGCCATGCACTATTACTGATGTGTGGATTAGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS CAA 90 bp GTTCAAGTGTTCAGAATGAACCACCTTATGGAAAAATGGTTCCGGTaGCACAGACTTATCTACATCACATTTAGAGTGCTGAGAATCATT +
Preference number: 6 (lower is better)
Translates to: VQVFRMNHLMEKWFR*HRLIYITFRVLRII
Trigger: AATGATTCTCAGCACTCTAAATGTGATGTAGATAAGTCTGTGCAACCGGAACCATTTTTCCATAAGGTGGTTCATTCTGAACACTTGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS TCA 72 bp GCTATGTATGACAAACGACAAAATTACACACATGGATaGATTCATGGATCATCACAGTCCAACCTGTTTGCA +
Preference number: 6 (lower is better)
Translates to: AMYDKRQNYTHG*IHGSSQSNLFA
Trigger: TGCAAACAGGTTGGACTGTGATGATCCATGAATTCATCCATGTGTGTAATTTTGTCGTTTGTCATACATAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509912.5
CDS GCA 72 bp AAGCTACATGCTTTCAGAGTAATCAAGGGCCAAATTTaGACCTCAGAAAATTATTGTACCCAAGAGGCAAAA +
Preference number: 6 (lower is better)
Translates to: KLHAFRVIKGQI*TSENYCTQEAK
Trigger: TTTTGCCTCTTGGGTACAATAATTTTCTGAGGTGCAAATTTGGCCCTTGATTACTCTGAAAGCATGTAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509912.5
CDS CCA 72 bp TCTTTCTTTTCACCACGAAGTTTGGCTTTAATCTGTTaGCGCTCATTGAAATTCTGTAGTCTTATTTGCCTC +
Preference number: 6 (lower is better)
Translates to: SFFSPRSLALIC*RSLKFCSLICL
Trigger: GAGGCAAATAAGACTACAGAATTTCAATGAGCGCCAACAGATTAAAGCCAAACTTCGTGGTGAAAAGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS CCA 72 bp GTTCAAGTGTTCAGAATGAACCACCTTATGGAAAAATaGTTCCGGTTGCACAGACTTATCTACATCACATTT +
Preference number: 6 (lower is better)
Translates to: VQVFRMNHLMEK*FRLHRLIYITF
Trigger: AAATGTGATGTAGATAAGTCTGTGCAACCGGAACCATTTTTCCATAAGGTGGTTCATTCTGAACACTTGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS CAA 72 bp AAAGCTACATGCTTTCAGAGTAATCAAGGGCCAAATTaGCACCTCAGAAAATTATTGTACCCAAGAGGCAAA +
Preference number: 6 (lower is better)
Translates to: KATCFQSNQGPN*HLRKLLYPRGK
Trigger: TTTGCCTCTTGGGTACAATAATTTTCTGAGGTGCAAATTTGGCCCTTGATTACTCTGAAAGCATGTAGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509912.5
CDS CAA 90 bp TCTTTTCCATTTAGCTTCATTATCTTCTGCTCTTTGTTGCTGCATTaGGTCAAAAATGGCATGGTAATGTTCATACTGTCCTCGAGAAGA +
Preference number: 6 (lower is better)
Translates to: SFPFSFIIFCSLLLH*VKNGMVMFILSSRR
Trigger: TCTTCTCGAGGACAGTATGAACATTACCATGCCATTTTTGACCAAATGCAGCAACAAAGAGCAGAAGATAATGAAGCTAAATGGAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000509912.5
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS CAA 90 bp TGGATGAATTCATGGATCATCACAGTCCAACCTGTTTGCATTGGCTaGTTTAGACACCGCCTTCAATCTTTTCAAAGTTTTTCTAATATC +
Preference number: 6 (lower is better)
Translates to: WMNSWIITVQPVCIG*FRHRLQSFQSFSNI
Trigger: GATATTAGAAAAACTTTGAAAAGATTGAAGGCGGTGTCTAAACAAGCCAATGCAAACAGGTTGGACTGTGATGATCCATGAATTCATCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509912.5
CDS TCA 72 bp ATTCATCATTATCTTCTTGGTAGGCTCCATCTGCCATaGCTAAATGAAGAATCTTGGCATAAAGATGCTGAT +
Preference number: 6 (lower is better)
Translates to: IHHYLLGRLHLP*LNEESWHKDAD
Trigger: ATCAGCATCTTTATGCCAAGATTCTTCATTTAGTCATGGCAGATGGAGCCTACCAAGAAGATAATGATGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
ENST00000638824.1
CDS CAA 72 bp ATTCTCTATACTGGACAATATTTGGATGCTTCATGTTaGCCAATACTGCAACTTCTCTCCTTGATTCTTCTC +
Preference number: 6 (lower is better)
Translates to: ILYTGQYLDASC*PILQLLSLILL
Trigger: GAGAAGAATCAAGGAGAGAAGTTGCAGTATTGGCAAACATGAAGCATCCAAATATTGTCCAGTATAGAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS CAA 72 bp TTTAGCTTCATTATCTTCTGCTCTTTGTTGCTGCATTaGGTCAAAAATGGCATGGTAATGTTCATACTGTCC +
Preference number: 6 (lower is better)
Translates to: FSFIIFCSLLLH*VKNGMVMFILS
Trigger: GGACAGTATGAACATTACCATGCCATTTTTGACCAAATGCAGCAACAAAGAGCAGAAGATAATGAAGCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000439128.6
ENST00000507142.6
ENST00000509912.5
ENST00000510533.5
ENST00000511633.5
ENST00000512193.5
CDS CAA 72 bp GTAAACTATGGACTTTGGGTGATAATGGATCGATGTTaGATCATAACAAACGTTATCACTCAAATGAGGATG +
Preference number: 6 (lower is better)
Translates to: VNYGLWVIMDRC*IITNVITQMRM
Trigger: CATCCTCATTTGAGTGATAACGTTTGTTATGATCAAACATCGATCCATTATCACCCAAAGTCCATAGTTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509912.5
CDS CAA 72 bp TGGAGCACAGGGGATTTTGAAGGCAGTCACATTATTTaGTATGATATTACAGTGGTGGATACCTATAATTAT +
Preference number: 6 (lower is better)
Translates to: WSTGDFEGSHII*YDITVVDTYNY
Trigger: ATAATTATAGGTATCCACCACTGTAATATCATACAAAATAATGTGACTGCCTTCAAAATCCCCTGTGCTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509912.5