Pregenerated sensors for NEIL2 (Homo sapiens)
Ensembl gene IDs: ENSG00000154328Ensembl transcript IDs: ENST00000284503.7, ENST00000403422.7, ENST00000436750.7, ENST00000455213.6, ENST00000528113.5, ENST00000528323.5
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCCGTGGTCCCAACATTTTGGGAGACCAAGGTGGGAGGAATGCTTaGGTTGTAGGAGTTCAAACCAGCCTGGCAAATATGGCAAGACCC | + |
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Preference number: 1 (lower is better) Translates to: TRGPNILGDQGGRNA*VVGVQTSLANMARP Trigger: GGGTCTTGCCATATTTGCCAGGCTGGTTTGAACTCCTACAACTCAAGCATTCCTCCCACCTTGGTCTCCCAAAATGTTGGGACCACGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| 3UTR-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACATCTGCAAAGCTATGTTaGGAGCACAGCCATTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: GQGCREPRSHHHTLARETSAKLC*EHSHFP Trigger: TGGGAAATGGCTGTGCTCCCAACATAGCTTTGCAGA...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| 3UTR GCA 72 bp | TGGTCCCAACATTTTGGGAGACCAAGGTGGGAGGAATaGTTGAGTTGTAGGAGTTCAAACCAGCCTGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: WSQHFGRPRWEE*LSCRSSNQPGK Trigger: TTTGCCAGGCTGGTTTGAACTCCTACAACTCAAGCATTCCTCCCACCTTGGTCTCCCAAAATGTTGGGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| 3UTR TCA 72 bp | CCCAACATTTTGGGAGACCAAGGTGGGAGGAATGCTTaGGTTGTAGGAGTTCAAACCAGCCTGGCAAATATG | + |
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Preference number: 3 (lower is better) Translates to: PNILGDQGGRNA*VVGVQTSLANM Trigger: CATATTTGCCAGGCTGGTTTGAACTCCTACAACTCAAGCATTCCTCCCACCTTGGTCTCCCAAAATGTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR TCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAACCTCCGCAGGCGGCTaGGACGGAGGAGGGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETTSAGG*DGGGPG Trigger: CCCGGGCCCTCCTCCGTCTCAGCCGCCTGCGGAGGT...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284503.7 |
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| CDS-3UTR TCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAGCGCAGACGCGGGTCTaGGGGTCAGTGGGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETAQTRV*GSVGAS Trigger: GGAGGCCCCCACTGACCCTCAGACCCGCGTCTGCGC...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000284503.7 |
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| CDS-3UTR GCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACGGCTCGGCGGCCCATaGGGCCTCCGTCCCCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETRLGGP*GLRPLR Trigger: CCTAAGGGGACGGAGGCCGCATGGGCCGCCGAGCCG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436750.7 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACTCACCGGCTCCGGGTaGGTGGCACGTCGGCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETLTGSG*VARRPD Trigger: GTCGGGCCGACGTGCCACCCACCCGGAGCCGGTGAG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284503.7 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACATGGACCGGCTCCGGGTaGGTGGCACGTCGGCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETWTGSG*VARRPD Trigger: GTCGGGCCGACGTGCCACCCACCCGGAGCCGGTCCA...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000403422.7 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACATCCCGGCTCCGGGTaGGTGGCACGTCGGCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETHPGSG*VARRPD Trigger: GTCGGGCCGACGTGCCACCCACCCGGAGCCGGGATG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436750.7 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAACAGCCGGCTCCGGGTaGGTGGCACGTCGGCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETTAGSG*VARRPD Trigger: GTCGGGCCGACGTGCCACCCACCCGGAGCCGGCTGT...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455213.6 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAGGGTCTGAGGGTCAGTaGGGGCCTCCAGGCGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETGSEGQ*GPPGVG Trigger: GCCCACGCCTGGAGGCCCCCACTGACCCTCAGACCC...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000284503.7 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACGAGGAGCTCGAGGCTaGCGCTGCGCCAGCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETRGARG*RCASQG Trigger: TCCCTGGCTGGCGCAGCGCCAGCCTCGAGCTCCTCG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284503.7 |
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| CDS-3UTR GCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAGCTCGAGGCTGGCGCTaGGCCAGCCAGGGAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETARGWR*ASQGRG Trigger: TCCTCTTCCCTGGCTGGCGCAGCGCCAGCCTCGAGC...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284503.7 |
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| CDS-3UTR GCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACTGGGCTCCCCGACCTaGTTTGGGTCCGCAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETLGSPT*FGSAAP Trigger: AGGGGCTGCGGACCCAAAGCAGGTCGGGGAGCCCAG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAGCTAGCTGGGCGCGGTaGCTCACACCCGTGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETASWAR*LTPVVP Trigger: TGGGACCACGGGTGTGAGCCACCGCGCCCAGCTAGC...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACACAGCCGCTCCAGCTaGGGGCGGAGATTTCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETHSRSS*GRRFPG Trigger: GCCGGGAAATCTCCGCCCCCAGCTGGAGCGGCTGTG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACACCAACGGCCCTTCTaGCATCCCGGCTCCGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETHQRPF*HPGSGW Trigger: CCACCCGGAGCCGGGATGCCAGAAGGGCCGTTGGTG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436750.7 |
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| CDS-3UTR GCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACCATCAAGGGTCTTCTaGCCGCTGGGCTCCCCGACC | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETPSRVF*PLGSPT Trigger: GGTCGGGGAGCCCAGCGGGCAGAAGACCCTTGATGG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR GCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAGAAGCAAGCCGCCTCTaGAACAGCCGGCTCCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETEASRL*NSRLRV Trigger: CACCCGGAGCCGGCTGTTGCAGAGGCGGCTTGCTTC...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455213.6 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAGGGTCTTCTGCCCGCTaGGCTCCCCGACCTGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETGSSAR*APRPAL Trigger: CAAAGCAGGTCGGGGAGCCCAGCGGGCAGAAGACCC...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAGGCTCCTCTGACAACTaGGGCTGGCACTGCGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETGSSDN*GWHCGH Trigger: GTGCCCGCAGTGCCAGCCCCAGTTGTCAGAGGAGCC...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR TCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACTGCTCTGGCTCCTCTaGCAACTGGGGCTGGCACTG | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETLLWLL*QLGLAL Trigger: CAGTGCCAGCCCCAGTTGTCAGAGGAGCCAGAGCAG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR TCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAAGCGGCAAGGTTCCGTaGGGAGCACCACCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETSGKVP*GAPPAP Trigger: AGGAGCTGGTGGTGCTCCTCACGGAACCTTGCCGCT...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR GCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACTGCTTTCCCAACTCTaGCTCGGGGTGCGGGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETLLSQL*LGVRGE Trigger: CTCTCCCCGCACCCCGAGGCAGAGTTGGGAAAGCAG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000284503.7 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAAACACAGGAGCTAGCTaGGCGCGGTGGCTCACACCC | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETNTGAS*ARWLTP Trigger: GGGTGTGAGCCACCGCGCCCAGCTAGCTCCTGTGTT...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR TCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAACTTCGAAGAGTCGCTaGAGATGCCGCGCCCACCCT | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETTSKSR*RCRAHP Trigger: AGGGTGGGCGCGGCATCTTCAGCGACTCTTCGAAGT...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284503.7 |
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| CDS-3UTR TCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAGTCTTGACCACCTGCTaGCCCACAAAGGGGGAGACC | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETVLTTC*PTKGET Trigger: GGTCTCCCCCTTTGTGGGTCAGCAGGTGGTCAAGAC...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000284503.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR TCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACATGCTGCCCCCTGTCTTaGCCACCTGCTGACCCACAA | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETCCPLS*PPADPQ Trigger: TTGTGGGTCAGCAGGTGGTCAAGACAGGGGGCAGCA...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000284503.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR TCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAAGGGCAAGGCTGCCGTaGGCCAAGATCACACCACCA | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETRARLP*AKITPP Trigger: TGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCCT...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR GCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACTGGTGTTGGGCTGCTaGCAGGGGGCCCCATTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETLVLGC*QGAPFL Trigger: AAGAAATGGGGCCCCCTGGCAGCAGCCCAACACCAG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR GCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACAGGGAGGGCAAGGCTaGCGTGAGCCAAGATCACAC | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETQGGQG*REPRSH Trigger: GTGTGATCTTGGCTCACGGCAGCCTTGCCCTCCCTG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR TCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACTCTGGAGGCTGAGATaGAGACTGCTTGAGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETLWRLR*RLLEPG Trigger: CCCTGGCTCAAGCAGTCTTCATCTCAGCCTCCAGAG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR TCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACCTCTGCAACAGCCTTaGAAGATGAGACGCGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETPLQQP*KMRRGR Trigger: CCTTCCGCGTCTCATCTTTCAAGGCTGTTGCAGAGG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284503.7 |
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| CDS-3UTR TCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAGAGCTCTGCAGACCGTaGGGATCCATCAAGGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETELCRP*GSIKGL Trigger: AAGACCCTTGATGGATCCTCACGGTCTGCAGAGCTC...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR TCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACAAACAAACCAAAGCTaGCACGCAGCCACCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETQTNQS*HAATSQ Trigger: CTGGGAGGTGGCTGCGTGTCAGCTTTGGTTTGTTTG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACACCAACGGCCCTTCTaGCATCCCTTAACCAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETHQRPF*HPLTSW Trigger: CCAACTGGTTAAGGGATGCCAGAAGGGCCGTTGGTG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000284503.7 ENST00000455213.6 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAACAGAGACTGCAGGCTaGCGGGCTGTAGCTTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETTETAG*RAVASY Trigger: GTAAGAAGCTACAGCCCGCCAGCCTGCAGTCTCTGT...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000284503.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR TCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAAACAGCCTTGAAAGATaGGACGCGGAAGGGACTTCG | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETNSLER*DAEGTS Trigger: CGAAGTCCCTTCCGCGTCTCATCTTTCAAGGCTGTT...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284503.7 |
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| CDS-3UTR TCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAAACCAGTTGGATGCCTaGTCCTCTTCTACGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETNQLDA*SSSTGK Trigger: CTTCCCCGTAGAAGAGGATCAGGCATCCAACTGGTT...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000284503.7 ENST00000455213.6 |
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| CDS-3UTR TCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAAGCTACTCTGGAGGCTaGGATGAAGACTGCTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETSYSGG*DEDCLS Trigger: GCTCAAGCAGTCTTCATCTCAGCCTCCAGAGTAGCT...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACATTCTTTCCATGGACCTaGGTGTCCTGGAGCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETFFPWT*VSWSHR Trigger: TCTGTGGCTCCAGGACACCCAGGTCCATGGAAAGAA...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000284503.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR TCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAAAATGCACCAAGTCCTaGAAATCTCCGGACACGTGG | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETKCTKS*KSPDTW Trigger: CCACGTGTCCGGAGATTTTCAGGACTTGGTGCATTT...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000284503.7 ENST00000455213.6 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAAATAATTTCTTTCCATaGACCGGCTCCGGGTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETNNFFP*TGSGWV Trigger: CACCCACCCGGAGCCGGTCCATGGAAAGAAATTATT...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000403422.7 |
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| CDS-3UTR GCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACCAAGGTGGGAGGAATaGTTGAGTTGTAGGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETPRWEE*LSCRSS Trigger: TGAACTCCTACAACTCAAGCATTCCTCCCACCTTGG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAGGATTTTTATGGAGATaGACAGGTGGGAAGCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETGFLWR*TGGKQA Trigger: GGCTTGCTTCCCACCTGTCCATCTCCATAAAAATCC...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000284503.7 ENST00000455213.6 |
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| CDS-3UTR TCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAGGAAAAGCCTTCATCTaGAATGCACCAAGTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETGKAFI*NAPSPE Trigger: TTCAGGACTTGGTGCATTTCAGATGAAGGCTTTTCC...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000284503.7 ENST00000455213.6 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACTACGGGGAAGCTTCTaGAAAAGCCTTCATCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETLRGSF*KSLHLK Trigger: TTTCAGATGAAGGCTTTTCCAGAAGCTTCCCCGTAG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000284503.7 ENST00000455213.6 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACATCCCTTAACCAGTTaGATGCCTGATCCTCTTCTA | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETHPLTS*MPDPLL Trigger: TAGAAGAGGATCAGGCATCCAACTGGTTAAGGGATG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000284503.7 ENST00000455213.6 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAAATAATTTCTTTCCATaGACCTGGGTGTCCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GQGCREPRSHHHTLARETNNFFP*TWVSWS Trigger: GCTCCAGGACACCCAGGTCCATGGAAAGAAATTATT...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000284503.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR CAA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAAGGGAAGAGGAGGGGTaGTCTCCGCCGTTCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: GQGCREPRSHHHTLARETREEEG*SPPFSS Trigger: GGAAGAGAACGGCGGAGACAACCCCTCCTCTTCCCT...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000284503.7 |
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| CDS-3UTR CAA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACACGTGGTCCCAACATTTaGGGAGACCAAGGTGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: GQGCREPRSHHHTLARETRGPNI*GDQGGR Trigger: CCTCCCACCTTGGTCTCCCAAAATGTTGGGACCACG...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000284503.7 ENST00000403422.7 ENST00000436750.7 ENST00000455213.6 |
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| CDS-3UTR CAA 90 bp | GGGCAAGGCTGCCGTGAGCCAAGATCACACCACCACACCCTAGCCAGGGAGACAGCCTCTGCAACAGCCTaGAAAGATGAGACGCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: GQGCREPRSHHHTLARETASATA*KDETRK Trigger: CTTCCGCGTCTCATCTTTCAAGGCTGTTGCAGAGGC...TGTCTCCCTGGCTAGGGTGTGGTGGTGTGATCTTGGCTCACGGCAGCCTTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284503.7 |
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| CDS CCA 90 bp | CACGTGGGCATGTTTCGTTTAGGGATTTTTATGGAGATGGACAGGTaGGAAGCAAGCCGCCTCTGCAACAGCCGGCTCCGGGTGGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: HVGMFRLGIFMEMDR*EASRLCNSRLRVGG Trigger: GCCACCCACCCGGAGCCGGCTGTTGCAGAGGCGGCTTGCTTCCCACCTGTCCATCTCCATAAAAATCCCTAAACGAAACATGCCCACGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000455213.6 ENST00000528323.5 |
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| CDS TCA 90 bp | TATGGAGATGGACAGGTGGGAAGCAAGCCGCCTCTGCAACAGCCTTaGAAGATGAGACGCGGAAGGGACTTCGAAGAGTCGCTGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: YGDGQVGSKPPLQQP*KMRRGRDFEESLKM Trigger: CATCTTCAGCGACTCTTCGAAGTCCCTTCCGCGTCTCATCTTTCAAGGCTGTTGCAGAGGCGGCTTGCTTCCCACCTGTCCATCTCCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284503.7 |
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| CDS GCA 72 bp | TCCGCCAGGCCGCAGATCTACCGGAGGGCGGGCGGCTaGACTCACCGGCTCCGGGTGGGTGGCACGTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: SARPQIYRRAGG*THRLRVGGTSA Trigger: GGCCGACGTGCCACCCACCCGGAGCCGGTGAGTGCAGCCGCCCGCCCTCCGGTAGATCTGCGGCCTGGCGGA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284503.7 |
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| CDS CCA 72 bp | GACGCGGGTCTGAGGGTCAGTGGGGGCCTCCAGGCGTaGGCAGCACCTCCGCAGGCGGCTGAGACGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: DAGLRVSGGLQA*AAPPQAAETEE Trigger: CTCCTCCGTCTCAGCCGCCTGCGGAGGTGCTGCCCACGCCTGGAGGCCCCCACTGACCCTCAGACCCGCGTC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000284503.7 |
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| CDS CCA 72 bp | CCCTCCCTGCCCGGGGGCTACCGAGGAGCTCGAGGCTaGCGCTGCGCCAGCCAGGGAAGAGGAGGGGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: PSLPGGYRGARG*RCASQGRGGVV Trigger: GACAACCCCTCCTCTTCCCTGGCTGGCGCAGCGCCAGCCTCGAGCTCCTCGGTAGCCCCCGGGCAGGGAGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000284503.7 |
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| CDS TCA 72 bp | GGACAGGTGGGAAGCAAGCCGCCTCTGCAACAGCCTTaGAAGATGAGACGCGGAAGGGACTTCGAAGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: GQVGSKPPLQQP*KMRRGRDFEES Trigger: CGACTCTTCGAAGTCCCTTCCGCGTCTCATCTTTCAAGGCTGTTGCAGAGGCGGCTTGCTTCCCACCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284503.7 |
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| CDS TCA 72 bp | TGGCGGGCTGTAGCTTCTTACTGCTGCCCCCTGTCTTaGCCACCTGCTGACCCACAAAGGGGGAGACCAAAT | + |
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Preference number: 6 (lower is better) Translates to: WRAVASYCCPLS*PPADPQRGRPN Trigger: ATTTGGTCTCCCCCTTTGTGGGTCAGCAGGTGGTCAAGACAGGGGGCAGCAGTAAGAAGCTACAGCCCGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000284503.7 ENST00000436750.7 ENST00000455213.6 ENST00000528113.5 ENST00000528323.5 |
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| CDS TCA 72 bp | ACGGCCCTTCTGGCATCCCTTAACCAGTTGGATGCCTaGTCCTCTTCTACGGGGAAGCTTCTGGAAAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: TALLASLNQLDA*SSSTGKLLEKP Trigger: AGGCTTTTCCAGAAGCTTCCCCGTAGAAGAGGATCAGGCATCCAACTGGTTAAGGGATGCCAGAAGGGCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000284503.7 ENST00000455213.6 ENST00000528323.5 |
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| CDS CCA 72 bp | ATGTTTCGTTTAGGGATTTTTATGGAGATGGACAGGTaGGAAGCAAGCCGCCTCTGCAACAGCCGGCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: MFRLGIFMEMDR*EASRLCNSRLR Trigger: CCGGAGCCGGCTGTTGCAGAGGCGGCTTGCTTCCCACCTGTCCATCTCCATAAAAATCCCTAAACGAAACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000455213.6 ENST00000528323.5 |
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| CDS CCA 72 bp | ATGTTTCGTTTAGGGATTTTTATGGAGATGGACAGGTaGGAAGCAAGCCGCCTCTGCAACAGCCTTGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: MFRLGIFMEMDR*EASRLCNSLER Trigger: TCTTTCAAGGCTGTTGCAGAGGCGGCTTGCTTCCCACCTGTCCATCTCCATAAAAATCCCTAAACGAAACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000284503.7 |
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