RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NEGR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000172260

Ensembl transcript IDs: ENST00000306821.3, ENST00000357731.10, ENST00000467479.1

Found 468 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTCAATGCCAGCTGGTGAAAGCAGCCAGGAGGAGGGCTATACCCTaGAAAGCTGCAGAGGCGGAGCTGCCTAAGGCCATGGGAGCCCAC +
Preference number: 1 (lower is better)
Translates to: TQCQLVKAARRRAIP*KAAEAELPKAMGAH
Trigger: GTGGGCTCCCATGGCCTTAGGCAGCTCCGCCTCTGCAGCTTTGCAGGGTATAGCCCTCCTCCTGGCTGCTTTCACCAGCTGGCATTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 90 bp TGCACCATGCACCTGGAAAAGGCACAGACACTCAATGCCAGCTGGTaGAAGCAGCCAGGAGGAGGGCTATACCCTGCAAAGCTGCAGAGG +
Preference number: 1 (lower is better)
Translates to: CTMHLEKAQTLNASW*KQPGGGLYPAKLQR
Trigger: CCTCTGCAGCTTTGCAGGGTATAGCCCTCCTCCTGGCTGCTTTCACCAGCTGGCATTGAGTGTCTGTGCCTTTTCCAGGTGCATGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 90 bp GGTACAGCTTGGGCTGTTGCTTCAGACAGTGGAAGCCCCAAGCCTTaGCAGCTTCCACATGGTGTTGAGCCTGTGGGTGCATGGAAGTCA +
Preference number: 1 (lower is better)
Translates to: GTAWAVASDSGSPKP*QLPHGVEPVGAWKS
Trigger: TGACTTCCATGCACCCACAGGCTCAACACCATGTGGAAGCTGCCAAGGCTTGGGGCTTCCACTGTCTGAAGCAACAGCCCAAGCTGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 90 bp TCTCCTCATGGAGAACCTCTGCTAGGGCAGTGCAGAAGGAAAATGTaGAGTGAGCCCCACACAGAGTCCCTACTGGGACACCACGTAGTG +
Preference number: 1 (lower is better)
Translates to: SPHGEPLLGQCRRKM*SEPHTESLLGHHVV
Trigger: CACTACGTGGTGTCCCAGTAGGGACTCTGTGTGGGGCTCACTCCACATTTTCCTTCTGCACTGCCCTAGCAGAGGTTCTCCATGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR GCA 90 bp ACTAACAGCTTGCACCATGCACCTGGAAAAGGCACAGACACTCAATaGCAGCTGGTGAAAGCAGCCAGGAGGAGGGCTATACCCTGCAAA +
Preference number: 1 (lower is better)
Translates to: TNSLHHAPGKGTDTQ*QLVKAARRRAIPCK
Trigger: TTTGCAGGGTATAGCCCTCCTCCTGGCTGCTTTCACCAGCTGGCATTGAGTGTCTGTGCCTTTTCCAGGTGCATGGTGCAAGCTGTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 90 bp GTGGAAGCCCCAAGCCTTGGCAGCTTCCACATGGTGTTGAGCCTGTaGGTGCATGGAAGTCAAAAATTGAGGCTTGGAAACCACCACCTA +
Preference number: 1 (lower is better)
Translates to: VEAPSLGSFHMVLSL*VHGSQKLRLGNHHL
Trigger: TAGGTGGTGGTTTCCAAGCCTCAATTTTTGACTTCCATGCACCCACAGGCTCAACACCATGTGGAAGCTGCCAAGGCTTGGGGCTTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 90 bp CCACCCAAGTCTCATTTGGAATTCCCACGGATTGTGGGAGGGACTTaGTGGGAGGTAATTGAATCATGGGAGCAGGTCTTTCCCATGCTG +
Preference number: 1 (lower is better)
Translates to: PPKSHLEFPRIVGGT*WEVIESWEQVFPML
Trigger: CAGCATGGGAAAGACCTGCTCCCATGATTCAATTACCTCCCACCAAGTCCCTCCCACAATCCGTGGGAATTCCAAATGAGACTTGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 90 bp CCCAAGCCTTGGCAGCTTCCACATGGTGTTGAGCCTGTGGGTGCATaGAAGTCAAAAATTGAGGCTTGGAAACCACCACCTAAATTTCAG +
Preference number: 1 (lower is better)
Translates to: PKPWQLPHGVEPVGA*KSKIEAWKPPPKFQ
Trigger: CTGAAATTTAGGTGGTGGTTTCCAAGCCTCAATTTTTGACTTCCATGCACCCACAGGCTCAACACCATGTGGAAGCTGCCAAGGCTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 90 bp CGCCCCTGTAGTCCCTTTGTTCTGGCCAATTTCTTCCACTTGGAATaGCTATGCTTACCCAATGCCTGTACTTCCATTGCATCTAGGAAG +
Preference number: 1 (lower is better)
Translates to: RPCSPFVLANFFHLE*LCLPNACTSIASRK
Trigger: CTTCCTAGATGCAATGGAAGTACAGGCATTGGGTAAGCATAGCCATTCCAAGTGGAAGAAATTGGCCAGAACAAAGGGACTACAGGGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 90 bp CCACACAAATCTCATTTTGAATTCCCACATATTGTGAGAGGGACTTaGTGGGAGGTAATTGAACCATGGGGGCAGGTCTTTCCCATGCTG +
Preference number: 1 (lower is better)
Translates to: PHKSHFEFPHIVRGT*WEVIEPWGQVFPML
Trigger: CAGCATGGGAAAGACCTGCCCCCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAAATGAGATTTGTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 90 bp GCTTGGAAACCACCACCTAAATTTCAGAGGATGTATAGAAATGCCTaGATGCCCAGAATGAAGTTCTCCTCATGGAGAACCTCTGCTAGG +
Preference number: 1 (lower is better)
Translates to: AWKPPPKFQRMYRNA*MPRMKFSSWRTSAR
Trigger: CCTAGCAGAGGTTCTCCATGAGGAGAACTTCATTCTGGGCATCCAGGCATTTCTATACATCCTCTGAAATTTAGGTGGTGGTTTCCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 90 bp CACAAATCTCATTTTGAATTCCCACATATTGTGAGAGGGACTTGGTaGGAGGTAATTGAACCATGGGGGCAGGTCTTTCCCATGCTGTTC +
Preference number: 1 (lower is better)
Translates to: HKSHFEFPHIVRGTW*EVIEPWGQVFPMLF
Trigger: GAACAGCATGGGAAAGACCTGCCCCCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAAATGAGATTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 90 bp CATGGTGTTGAGCCTGTGGGTGCATGGAAGTCAAAAATTGAGGCTTaGAAACCACCACCTAAATTTCAGAGGATGTATAGAAATGCCTGG +
Preference number: 1 (lower is better)
Translates to: HGVEPVGAWKSKIEA*KPPPKFQRMYRNAW
Trigger: CCAGGCATTTCTATACATCCTCTGAAATTTAGGTGGTGGTTTCCAAGCCTCAATTTTTGACTTCCATGCACCCACAGGCTCAACACCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 90 bp CAAAAAGAAGATACATGCGATTATGACAAGATTCTCCACTTGGTGTaGCCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAGGCAACTG +
Preference number: 1 (lower is better)
Translates to: QKEDTCDYDKILHLV*PVSYNPRLCVQRQL
Trigger: CAGTTGCCTTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCTTGTCATAATCGCATGTATCTTCTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 90 bp CTATACAAAAAGAAGATACATGCGATTATGACAAGATTCTCCACTTaGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAGGC +
Preference number: 1 (lower is better)
Translates to: LYKKKIHAIMTRFST*CDQSHTTQGCVSKG
Trigger: GCCTTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCTTGTCATAATCGCATGTATCTTCTTTTTGTATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 90 bp AATGAGCAATTCTACAGAAGGCGATCATCCCCATGTAAGCACTGCTaGTTATATCCCACGCTGCTTTTAACAAACTGTACCAGATTGGAT +
Preference number: 1 (lower is better)
Translates to: NEQFYRRRSSPCKHC*LYPTLLLTNCTRLD
Trigger: ATCCAATCTGGTACAGTTTGTTAAAAGCAGCGTGGGATATAATCAGCAGTGCTTACATGGGGATGATCGCCTTCTGTAGAATTGCTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR GCA 90 bp AAGACATTGCTTTTTATGATAGATCCAGGCAACAGGAAACACACATaGACACACACACCGACACACACAAAAGAGCCTTTCTTAGGAGAA +
Preference number: 1 (lower is better)
Translates to: KTLLFMIDPGNRKHT*THTPTHTKEPFLGE
Trigger: TTCTCCTAAGAAAGGCTCTTTTGTGTGTGTCGGTGTGTGTGTGCATGTGTGTTTCCTGTTGCCTGGATCTATCATAAAAAGCAATGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 90 bp ACCAAAATGCTGATAATGATATGGACAATAAAATCCAGGCTGAGGTaGTCTCAGATGGAAATGAATAACTTGTTGGGAACTGGAGCAAAG +
Preference number: 1 (lower is better)
Translates to: TKMLIMIWTIKSRLR*SQMEMNNLLGTGAK
Trigger: CTTTGCTCCAGTTCCCAACAAGTTATTCATTTCCATCTGAGACCACCTCAGCCTGGATTTTATTGTCCATATCATTATCAGCATTTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 90 bp ATCTCTGGCAATGATTTCTTAAGGAGTATGTCAAAAATGAGCTATTaGACACATTTTTGCCAGGTCACTTGTCAAGTACTTGGTAGGGAG +
Preference number: 1 (lower is better)
Translates to: ISGNDFLRSMSKMSY*THFCQVTCQVLGRE
Trigger: CTCCCTACCAAGTACTTGACAAGTGACCTGGCAAAAATGTGTTCAATAGCTCATTTTTGACATACTCCTTAAGAAATCATTGCCAGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 90 bp CAGAGCTGCACAGCCAGTTATATTACAAGGCTCATTCCTGAAACCTaGATATCATGCGAGCAGAAAAATCTAGATATGTGTTATATTTTG +
Preference number: 1 (lower is better)
Translates to: QSCTASYITRLIPET*ISCEQKNLDMCYIL
Trigger: CAAAATATAACACATATCTAGATTTTTCTGCTCGCATGATATTCAGGTTTCAGGAATGAGCCTTGTAATATAACTGGCTGTGCAGCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR CCA 90 bp TATACTGTTATTAAATTGTCTCTCATCACAAGAACTGAGTTAGTGTaGGGCAAAATTCTCAAACCCCATTGTCAGTGCAGGAAGAGATTT +
Preference number: 1 (lower is better)
Translates to: YTVIKLSLITRTELV*GKILKPHCQCRKRF
Trigger: AAATCTCTTCCTGCACTGACAATGGGGTTTGAGAATTTTGCCCCACACTAACTCAGTTCTTGTGATGAGAGACAATTTAATAACAGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR TCA 90 bp AATCTGCTTTTCTCCATGTCAGTATTTACAGCAGGTGCCATCTTCTaGTTAATTAAATCACAAGATGTTCCTTATGCTAACGTCTTAGCA +
Preference number: 1 (lower is better)
Translates to: NLLFSMSVFTAGAIF*LIKSQDVPYANVLA
Trigger: TGCTAAGACGTTAGCATAAGGAACATCTTGTGATTTAATTAATCAGAAGATGGCACCTGCTGTAAATACTGACATGGAGAAAAGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 90 bp CAGAGGGAGTACATTGACGGGTGTTTGGATCAAATTCCACTAACTTaGATGAATTACCTTGGAAAATTATCTCTACAAATTCTTACTTAC +
Preference number: 1 (lower is better)
Translates to: QREYIDGCLDQIPLT*MNYLGKLSLQILTY
Trigger: GTAAGTAAGAATTTGTAGAGATAATTTTCCAAGGTAATTCATTCAAGTTAGTGGAATTTGATCCAAACACCCGTCAATGTACTCCCTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 90 bp TGTTTCTTTTCTTCTTCCTTTTCCTTTCTCACTTTCAGTTTAAAGTaGAATCAGCTTCCCAAAGAAAGGATTAGAGAAATGGGTGCCTTT +
Preference number: 1 (lower is better)
Translates to: CFFSSSFSFLTFSLK*NQLPKERIREMGAF
Trigger: AAAGGCACCCATTTCTCTAATCCTTTCTTTGGGAAGCTGATTTCACTTTAAACTGAAAGTGAGAAAGGAAAAGGAAGAAGAAAAGAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR GCA 90 bp GTGGAGTCATTTGAAACTGTAGCATCTAGAATTTTTACCCTGTACTaGTTTAGAGTAAGCAGAAAGATGAGTGTAATACAGGAAATAAAG +
Preference number: 1 (lower is better)
Translates to: VESFETVASRIFTLY*FRVSRKMSVIQEIK
Trigger: CTTTATTTCCTGTATTACACTCATCTTTCTGCTTACTCTAAAGCAGTACAGGGTAAAAATTCTAGATGCTACAGTTTCAAATGACTCCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR TCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGGCTTCCACATGGTGTTaGGCCTGTGGGTGCATGGAA +
Preference number: 2 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLASTWC*ACGCME
Trigger: TTCCATGCACCCACAGGCTCAACACCATGTGGAAGC...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR GCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTCCAAGATCACACCACTaGACTCCATCCAGGGCAACC +
Preference number: 2 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGPRSHH*TPSRAT
Trigger: GGTTGCCCTGGATGGAGTGCAGTGGTGTGATCTTGG...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CAA 90 bp GGGCCACTGTCCTCCAGATCCCAGAATCATAAATCCACTAACAGCTaGCACCATGCACCTGGAAAAGGCACAGACACTCAATGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: GPLSSRSQNHKSTNS*HHAPGKGTDTQCQL
Trigger: CAGCTGGCATTGAGTGTCTGTGCCTTTTCCAGGTGCATGGTGCAAGCTGTTAGTGGATTTATGATTCTGGGATCTGGAGGACAGTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTATTCTCCACTTGGTGTaGCCAGTCTCATACAACCCA +
Preference number: 2 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGILHLV*PVSYNP
Trigger: TGGGTTGTATGAGACTGGTCACACCAAGTGGAGAAT...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGGCAATCCATTTGAAATaGAGGAGGGAAACCACCCTC +
Preference number: 2 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLAIHLK*RRETTL
Trigger: GAGGGTGGTTTCCCTCCTTCATTTCAAATGGATTGC...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGCACGTAGTGGAGCTGTaGGAAGTGGGCCACTGTCCT +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWHVVEL*EVGHCP
Trigger: AGGACAGTGGCCCACTTCTCACAGCTCCACTACGTG...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR GCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGAGGAGGGCTATACCCTaGAAAGCTGCAGAGGCGGAG +
Preference number: 2 (lower is better)
Translates to: FKLAAENCISNEELNVTKRRAIP*KAAEAE
Trigger: CTCCGCCTCTGCAGCTTTGCAGGGTATAGCCCTCCT...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTATTTTACATCTCGTCTaGGAGCGGTGGCTCACGCCT +
Preference number: 2 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLILHLV*ERWLTP
Trigger: AGGCGTGAGCCACCGCTCCCAGACGAGATGTAAAAT...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTCTCATTCCTGAAACCTaGATATCATGCGAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGLIPET*ISCEQK
Trigger: TTTCTGCTCGCATGATATTCAGGTTTCAGGAATGAG...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGACTACCCTAATACTCTaGTTCTTCCTTCCCTCTCAT +
Preference number: 2 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLTTLIL*FFLPSH
Trigger: ATGAGAGGGAAGGAAGAATCAGAGTATTAGGGTAGT...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGAGCCTCCCAAGCAGTTaGGATTACAGGCATGTGCCA +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWSLPSS*DYRHVP
Trigger: TGGCACATGCCTGTAATCTCAACTGCTTGGGAGGCT...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGTGGAGCTGTGAGAAGTaGGCCACTGTCCTCCAGATC +
Preference number: 2 (lower is better)
Translates to: FKLAAENCISNEELNVTKWSCEK*ATVLQI
Trigger: GATCTGGAGGACAGTGGCCCACTTCTCACAGCTCCA...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTAAGGCACACCCATGCTaGACTTACAGGAAAGAGAAG +
Preference number: 2 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLKAHPC*TYRKEK
Trigger: CTTCTCTTTCCTGTAAGTTCAGCATGGGTGTGCCTT...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGTTCCAGACTATCAACTaGGTGATACTTTCAGATGGA +
Preference number: 2 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLFQTIN*VILSDG
Trigger: TCCATCTGAAAGTATCACTCAGTTGATAGTCTGGAA...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGCCTCTTGCATCAGCATaGCCTGGATGTGAGAAATGG +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWPLASA*PGCEKW
Trigger: CCATTTCTCACATCCAGGTCATGCTGATGCAAGAGG...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR GCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAGGAAAATATGCAAAATaGTCCTGTCCACAGGAGCAC +
Preference number: 2 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKGKYAK*SCPQEH
Trigger: GTGCTCCTGTGGACAGGAGCATTTTGCATATTTTCC...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR GCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTAGCACAATTCAGAACTaGGGGAGGTCTAAGTCTGCT +
Preference number: 2 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLSTIQN*GRSKSA
Trigger: AGCAGACTTAGACCTCCCGCAGTTCTGAATTGTGCT...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR GCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTCACGTCAGAGACCTTTaGAGCAGCCCCTGCCATCAC +
Preference number: 2 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFHVRDL*SSPCHH
Trigger: GTGATGGCAGGGGCTGCTGCAAAGGTCTCTGACGTG...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGCCTGGATGTGAGAAATaGAGTCAAAGGAGATCATTT +
Preference number: 2 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLPGCEK*SQRRSF
Trigger: AAATGATCTCCTTTGACTCCATTTCTCACATCCAGG...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGCTTGCACCATGCACCTaGAAAAGGCACAGACACTCA +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWLAPCT*KRHRHS
Trigger: TGAGTGTCTGTGCCTTTTCCAGGTGCATGGTGCAAG...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGCCATGTAAGCACTGCTaGTTATATCCCACGCTGCTT +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWPCKHC*LYPTLL
Trigger: AAGCAGCGTGGGATATAATCAGCAGTGCTTACATGG...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAATACAAGGCTCATTCCTaGAACCTGAATATCATGCGA +
Preference number: 2 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKYKAHS*NLNIMR
Trigger: TCGCATGATATTCAGGTTTCAGGAATGAGCCTTGTA...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAGCTCTTACAAGCGTTTaGGTTTTCAGTTGTTTAGCC +
Preference number: 2 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKALTSV*VFSCLA
Trigger: GGCTAAACAACTGAAAACTCAAACGCTTGTAAGAGC...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGGGTCTAGCTTTAGGATaGCTGTGGGTAGAGCTTCTA +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWGLALG*LWVELL
Trigger: TAGAAGCTCTACCCACAGTCATCCTAAAGCTAGACC...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR GCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTAAACAGGGAACTGAATaGTTGTATTGCAGCCTTAAA +
Preference number: 2 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGKQGTE*LYCSLK
Trigger: TTTAAGGCTGCAATACAAGCATTCAGTTCCCTGTTT...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGGAGCCTGTGGGTGCATaGAAGTCAAAAATTGAGGCT +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWEPVGA*KSKIEA
Trigger: AGCCTCAATTTTTGACTTCCATGCACCCACAGGCTC...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CAA 90 bp AGCTTCCACATGGTGTTGAGCCTGTGGGTGCATGGAAGTCAAAAATaGAGGCTTGGAAACCACCACCTAAATTTCAGAGGATGTATAGAA +
Preference number: 2 (lower is better)
Translates to: SFHMVLSLWVHGSQK*RLGNHHLNFRGCIE
Trigger: TTCTATACATCCTCTGAAATTTAGGTGGTGGTTTCCAAGCCTCAATTTTTGACTTCCATGCACCCACAGGCTCAACACCATGTGGAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGTCAGAGGGAGTACATTaGCGGGTGTTTGGATCAAAT +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWSEGVH*RVFGSN
Trigger: ATTTGATCCAAACACCCGTCAATGTACTCCCTCTGA...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR GCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAAAAGAGAAGCAGAGCTaGACAGCCAGTTATATTACA +
Preference number: 2 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKKEKQS*TASYIT
Trigger: TGTAATATAACTGGCTGTGCAGCTCTGCTTCTCTTT...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR GCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGATTTTTACCCTGTACTaGTTTAGAGTAAGCAGAAAG +
Preference number: 2 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLIFTLY*FRVSRK
Trigger: CTTTCTGCTTACTCTAAAGCAGTACAGGGTAAAAAT...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR GCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGCTGAATACCTTCAGGTaGCCGTTGTTTTATACCCAG +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWLNTFR*PLFYTQ
Trigger: CTGGGTATAAAACAACGGGCACCTGAAGGTATTCAG...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGGTAGTCCCTTTGTTCTaGCCAATTTCTTCCACTTGG +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWVVPLF*PISSTW
Trigger: CCAAGTGGAAGAAATTGGCCAGAACAAAGGGACTAC...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGATGAGCCAGTGCACCTaGCTGGCATTCAGTTTTAAA +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWMSQCT*LAFSFK
Trigger: TTTAAAACTGAATGCCAGCCAGGTGCACTGGCTCAT...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGATTGAAACAGGGAACTaGATGCTTGTATTGCAGCCT +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWIETGN*MLVLQP
Trigger: AGGCTGCAATACAAGCATTCAGTTCCCTGTTTCAAT...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTAGATACATGCGATTATaGCAAGATTCTCCACTTGGT +
Preference number: 2 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLRYMRL*QDSPLG
Trigger: ACCAAGTGGAGAATCTTGTCATAATCGCATGTATCT...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTTTGATTGCAGATGTCTaGGGAATAGTCTTAGTGGAT +
Preference number: 2 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLLIADV*GIVLVD
Trigger: ATCCACTAAGACTATTCCTCAGACATCTGCAATCAA...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGGAGATAGTGCTGAAATaGGTTAAGACTTTGAGGGAC +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWEIVLK*VKTLRD
Trigger: GTCCCTCAAAGTCTTAACTCATTTCAGCACTATCTC...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGCTGAAAATGTGGAAGTaGCTTTGGAACTGGGTAACA +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWLKMWK*LWNWVT
Trigger: TGTTACCCAGTTCCAAAGTCACTTCCACATTTTCAG...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR GCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGAGCAGGTCTTTCCCATaGTGTTCTTGTGATAGTGAA +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWSRSFP*CSCDSE
Trigger: TTCACTATCACAAGAACAGCATGGGAAAGACCTGCT...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGCAAACTGTACCAGATTaGATCCAGCCATCAGCACTT +
Preference number: 2 (lower is better)
Translates to: FKLAAENCISNEELNVTKQTVPD*IQPSAL
Trigger: AAGTGCTGATGGCTGGATCCAATCTGGTACAGTTTG...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTCTCTGTTTCATGTGCTaGTTTTCCATGTCTGATACT +
Preference number: 2 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLLCFMC*FSMSDT
Trigger: AGTATCAGACATGGAAAACCAGCACATGAAACAGAG...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTAAGGTGTATGATTCTTaGAAAGTTCAGAGGGAGTAC +
Preference number: 2 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLKVYDS*KVQREY
Trigger: GTACTCCCTCTGAACTTTCCAAGAATCATACACCTT...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGATTCAGAACACCACATaGCCAGCTTGCAAGCTTATT +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWIQNTT*PACKLI
Trigger: AATAAGCTTGCAAGCTGGCCATGTGGTGTTCTGAAT...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTTGCAGAAGGAAAATGTaGAGTGAGCCCCACACAGAG +
Preference number: 2 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFCRRKM*SEPHTE
Trigger: CTCTGTGTGGGGCTCACTCCACATTTTCCTTCTGCA...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGTGGATTGACTCTTATTaGAACAGGGAACTGAATGCT +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWWIDSY*NRELNA
Trigger: AGCATTCAGTTCCCTGTTTCAATAAGAGTCAATCCA...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATAAGGCACACCCATGCTaGACTTACAGGAAAGAGAAG +
Preference number: 2 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNKAHPC*TYRKEK
Trigger: CTTCTCTTTCCTGTAAGTTCAGCATGGGTGTGCCTT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGTCTCATCACAAGAACTaGGTTAGTGTGGGGCAAAAT +
Preference number: 2 (lower is better)
Translates to: FKLAAENCISNEELNVTKSHHKN*VSVGQN
Trigger: ATTTTGCCCCACACTAACTCAGTTCTTGTGATGAGA...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGACTCATAAATACTCATaGTTTCACTCTGTCCGAGGG +
Preference number: 2 (lower is better)
Translates to: FKLAAENCISNEELNVTKTHKYS*FHSVRG
Trigger: CCCTCGGACAGAGTGAAATCATGAGTATTTATGAGT...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR GCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGTGCTCCATTGTAAAATaGAAAGGAGAGGTAGTTGTG +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWCSIVK*KGEVVV
Trigger: CACAACTACCTCTCCTTTGCATTTTACAATGGAGCA...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR GCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTGCTCTGCCTCCCAGTTaGTCCCAGGATGATTTAAAT +
Preference number: 2 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFALPPS*SQDDLN
Trigger: ATTTAAATCATCCTGGGAGCAACTGGGAGGCAGAGC...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGACAAGATTCTCCACTTaGTGTGACCAGTCTCATACA +
Preference number: 2 (lower is better)
Translates to: FKLAAENCISNEELNVTKTRFST*CDQSHT
Trigger: TGTATGAGACTGGTCACACCAAGTGGAGAATCTTGT...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGCCAATTTCTTCCACTTaGAATGGCTATGCTTACCCA +
Preference number: 2 (lower is better)
Translates to: FKLAAENCISNEELNVTKPISST*NGYAYP
Trigger: TGGGTAAGCATAGCCATTCCAAGTGGAAGAAATTGG...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGCTGGTTTTCCATGTCTaGTACTTGATGTTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWLVFHV*YLMFLF
Trigger: AAACAGAAACATCAAGTATCAGACATGGAAAACCAG...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR GCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTTGTCCACAGGAGCACTaGCTCTGTCATACTAACTTA +
Preference number: 2 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFCPQEH*LCHTNL
Trigger: TAAGTTAGTATGACAGAGGCAGTGCTCCTGTGGACA...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR GCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTATTTGTTTGCTAAATTaGTCTCTTTCCACCAGTGAT +
Preference number: 2 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLICLLN*SLSTSD
Trigger: ATCACTGGTGGAAAGAGAGCAATTTAGCAAACAAAT...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR GCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTCAACACTTGCAAAAGTaGTCCATTGTAAAATGCAAA +
Preference number: 2 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLQHLQK*SIVKCK
Trigger: TTTGCATTTTACAATGGAGCACTTTTGCAAGTGTTG...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR GCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTGCTATGCTTACCCAATaGCTGTACTTCCATTGCATC +
Preference number: 2 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFAMLTQ*LYFHCI
Trigger: GATGCAATGGAAGTACAGGCATTGGGTAAGCATAGC...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATCAAACTGTACCAGATTaGATCCAGCCATCAGCACTT +
Preference number: 2 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNQTVPD*IQPSAL
Trigger: AAGTGCTGATGGCTGGATCCAATCTGGTACAGTTTG...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR CCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGCAGACTCCACAAATTTaGAATCATGACAACACTTTG +
Preference number: 2 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWQTPQI*NHDNTL
Trigger: CAAAGTGTTGTCATGATTCCAAATTTGTGGAGTCTG...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCCATGTAAGCACTGCTaGTTATATCCCACGCTGCTT +
Preference number: 2 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLPCKHC*LYPTLL
Trigger: AAGCAGCGTGGGATATAATCAGCAGTGCTTACATGG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATTACAAGGCTCATTCCTaGAACCTGAATATCATGCGA +
Preference number: 2 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNYKAHS*NLNIMR
Trigger: TCGCATGATATTCAGGTTTCAGGAATGAGCCTTGTA...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATACTCATAAATACTCATaGTTTCACTCTGTCCGAGGG +
Preference number: 2 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNTHKYS*FHSVRG
Trigger: CCCTCGGACAGAGTGAAATCATGAGTATTTATGAGT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGTGCCACAATTGTCTCTaGAATGAAGCATGTTTCTTA +
Preference number: 2 (lower is better)
Translates to: FKLAAENCISNEELNVTKCHNCL*NEACFL
Trigger: TAAGAAACATGCTTCATTTCAGAGACAATTGTGGCA...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTAAGGCAACTGTACTGTaGGTTTCACGTTTCCAAAGT +
Preference number: 2 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFKATVL*VSRFQS
Trigger: ACTTTGGAAACGTGAAACTCACAGTACAGTTGCCTT...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATCTAGCAGACCATGACTaGATGCTTTTGAAAAGTTGT +
Preference number: 2 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNLADHD*MLLKSC
Trigger: ACAACTTTTCAAAAGCATTCAGTCATGGTCTGCTAG...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATTGGATTGACTCTTATTaGAACAGGGAACTGAATGCT +
Preference number: 2 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNWIDSY*NRELNA
Trigger: AGCATTCAGTTCCCTGTTTCAATAAGAGTCAATCCA...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATTTCCAGACTATCAACTaGGTGATACTTTCAGATGGA +
Preference number: 2 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNFQTIN*VILSDG
Trigger: TCCATCTGAAAGTATCACTCAGTTGATAGTCTGGAA...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATATAGCTACTGAGCTATaGCTGTACTTCTGTCACATT +
Preference number: 2 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNIATEL*LYFCHI
Trigger: AATGTGACAGAAGTACAGTCATAGCTCAGTAGCTAT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR TCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTACTGTTGGGAAAGCATaGTTGGTTTTGAAATGTGAG +
Preference number: 2 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFTVGKA*LVLKCE
Trigger: CTCACATTTCAAAACCAATCATGCTTTCCCAACAGT...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR GCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATAAAGAGAAGCAGAGCTaGACAGCCAGTTATATTACA +
Preference number: 2 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNKEKQS*TASYIT
Trigger: TGTAATATAACTGGCTGTGCAGCTCTGCTTCTCTTT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR GCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATCCTTTGAGTGGACTGTaGTGTCATTTTAAAGGGAAT +
Preference number: 2 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNPLSGL*CHFKGN
Trigger: ATTCCCTTTAAAATGACAGCACAGTCCACTCAAAGG...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR GCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGTGTCCACAGGAGCACTaGCTCTGTCATACTAACTTA +
Preference number: 2 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLCPQEH*LCHTNL
Trigger: TAAGTTAGTATGACAGAGGCAGTGCTCCTGTGGACA...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR GCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGGGAAAATATGCAAAATaGTCCTGTCCACAGGAGCAC +
Preference number: 2 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLGKYAK*SCPQEH
Trigger: GTGCTCCTGTGGACAGGAGCATTTTGCATATTTTCC...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCAACCTAGCAGACCATaGCTGAATGCTTTTGAAAAG +
Preference number: 2 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLQPSRP*LNAFEK
Trigger: CTTTTCAAAAGCATTCAGTCATGGTCTGCTAGGTTG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGATTGAAACAGGGAACTaGATGCTTGTATTGCAGCCT +
Preference number: 2 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLIETGN*MLVLQP
Trigger: AGGCTGCAATACAAGCATTCAGTTCCCTGTTTCAAT...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCTCATTCCTGAAACCTaGATATCATGCGAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLLIPET*ISCEQK
Trigger: TTTCTGCTCGCATGATATTCAGGTTTCAGGAATGAG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGTCTCATCACAAGAACTaGGTTAGTGTGGGGCAAAAT +
Preference number: 2 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLSHHKN*VSVGQN
Trigger: ATTTTGCCCCACACTAACTCAGTTCTTGTGATGAGA...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATAAATGGCTTTCAAGGTaGTGGCCTTTCTTTAGTAAA +
Preference number: 2 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNKWLSR*WPFFSK
Trigger: TTTACTAAAGAAAGGCCATCACCTTGAAAGCCATTT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR TCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTAAATGGCTTTCAAGGTaGTGGCCTTTCTTTAGTAAA +
Preference number: 2 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFKWLSR*WPFFSK
Trigger: TTTACTAAAGAAAGGCCATCACCTTGAAAGCCATTT...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTAATACATATAGCTACTaGGCTATGACTGTACTTCTG +
Preference number: 2 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFNTYSY*AMTVLL
Trigger: CAGAAGTACAGTCATAGCTCAGTAGCTATATGTATT...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR GCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATTTCAGATGGAAAATATaGAAAATGCTCCTGTCCACA +
Preference number: 2 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNFRWKI*KMLLST
Trigger: TGTGGACAGGAGCATTTTGCATATTTTCCATCTGAA...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR GCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTACAGAAACTGTTGGTTaGACTGTTGTCATTTCTTCT +
Preference number: 2 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFTETVG*TVVISS
Trigger: AGAAGAAATGACAACAGTGCAACCAACAGTTTCTGT...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATCAGACTCCACAAATTTaGAATCATGACAACACTTTG +
Preference number: 2 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNQTPQI*NHDNTL
Trigger: CAAAGTGTTGTCATGATTCCAAATTTGTGGAGTCTG...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR CCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTCTACTTAGAAAACTATaGAAGAGTTCTGTGGCTCTT +
Preference number: 2 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFLLRKL*KSSVAL
Trigger: AAGAGCCACAGAACTCTTCCATAGTTTTCTAAGTAG...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCTAGCAGACCATGACTaGATGCTTTTGAAAAGTTGT +
Preference number: 2 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLLADHD*MLLKSC
Trigger: ACAACTTTTCAAAAGCATTCAGTCATGGTCTGCTAG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR GCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATACTGAATGCTTGTATTaGAGCCTTAAAGAATCACAT +
Preference number: 2 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNTECLY*SLKESH
Trigger: ATGTGATTCTTTAAGGCTGCAATACAAGCATTCAGT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR GCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCCTTTGAGTGGACTGTaGTGTCATTTTAAAGGGAAT +
Preference number: 2 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLPLSGL*CHFKGN
Trigger: ATTCCCTTTAAAATGACAGCACAGTCCACTCAAAGG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR GCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATGATTATTATGGAGTGTaGCACTTTAAAGCTGCAATA +
Preference number: 2 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNDYYGV*HFKAAI
Trigger: TATTGCAGCTTTAAAGTGGCACACTCCATAATAATC...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR CCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATCTTAGAGATAGTGTATaGTTTAACTTGATCACTCTG +
Preference number: 2 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNLRDSV*FNLITL
Trigger: CAGAGTGATCAAGTTAAACCATACACTATCTCTAAG...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR CCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATAGCTATTTTAGAGATTaGTCTGCTACATACCGATAT +
Preference number: 2 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNSYFRD*SATYRY
Trigger: ATATCGGTATGTAGCAGACCAATCTCTAAAATAGCT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR GCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGAAACAGGGAACTGAATaGTTGTATTGCAGCCTTAAA +
Preference number: 2 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLKQGTE*LYCSLK
Trigger: TTTAAGGCTGCAATACAAGCATTCAGTTCCCTGTTT...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR CCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCTTAGAGATAGTGTATaGTTTAACTTGATCACTCTG +
Preference number: 2 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLLRDSV*FNLITL
Trigger: CAGAGTGATCAAGTTAAACCATACACTATCTCTAAG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR GCA 72 bp GGAGGGCTATACCCTGCAAAGCTGCAGAGGCGGAGCTaGCTAAGGCCATGGGAGCCCACCTCTTGCATCAGC +
Preference number: 3 (lower is better)
Translates to: GGLYPAKLQRRS*LRPWEPTSCIS
Trigger: GCTGATGCAAGAGGTGGGCTCCCATGGCCTTAGGCAGCTCCGCCTCTGCAGCTTTGCAGGGTATAGCCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR GCA 72 bp CAGCTGGTGAAAGCAGCCAGGAGGAGGGCTATACCCTaGAAAGCTGCAGAGGCGGAGCTGCCTAAGGCCATG +
Preference number: 3 (lower is better)
Translates to: QLVKAARRRAIP*KAAEAELPKAM
Trigger: CATGGCCTTAGGCAGCTCCGCCTCTGCAGCTTTGCAGGGTATAGCCCTCCTCCTGGCTGCTTTCACCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR GCA 72 bp GGTTTTGTGGGCCTGGCCCAGGGTCCCTCTGCTATGTaGAGTCTAGGAACTTGGTGCTCTGCCTCCCAGTTG +
Preference number: 3 (lower is better)
Translates to: GFVGLAQGPSAM*SLGTWCSASQL
Trigger: CAACTGGGAGGCAGAGCACCAAGTTCCTAGACTGCACATAGCAGAGGGACCCTGGGCCAGGCCCACAAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 72 bp ACAGAGTCCCTACTGGGACACCACGTAGTGGAGCTGTaGGAAGTGGGCCACTGTCCTCCAGATCCCAGAATC +
Preference number: 3 (lower is better)
Translates to: TESLLGHHVVEL*EVGHCPPDPRI
Trigger: GATTCTGGGATCTGGAGGACAGTGGCCCACTTCTCACAGCTCCACTACGTGGTGTCCCAGTAGGGACTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 72 bp ACCTCTGCTAGGGCAGTGCAGAAGGAAAATGTGGAGTaGGCCCCACACAGAGTCCCTACTGGGACACCACGT +
Preference number: 3 (lower is better)
Translates to: TSARAVQKENVE*APHRVPTGTPR
Trigger: ACGTGGTGTCCCAGTAGGGACTCTGTGTGGGGCTCACTCCACATTTTCCTTCTGCACTGCCCTAGCAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 72 bp GGAGAACCTCTGCTAGGGCAGTGCAGAAGGAAAATGTaGAGTGAGCCCCACACAGAGTCCCTACTGGGACAC +
Preference number: 3 (lower is better)
Translates to: GEPLLGQCRRKM*SEPHTESLLGH
Trigger: GTGTCCCAGTAGGGACTCTGTGTGGGGCTCACTCCACATTTTCCTTCTGCACTGCCCTAGCAGAGGTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 72 bp CACCTGGAAAAGGCACAGACACTCAATGCCAGCTGGTaGAAGCAGCCAGGAGGAGGGCTATACCCTGCAAAG +
Preference number: 3 (lower is better)
Translates to: HLEKAQTLNASW*KQPGGGLYPAK
Trigger: CTTTGCAGGGTATAGCCCTCCTCCTGGCTGCTTTCACCAGCTGGCATTGAGTGTCTGTGCCTTTTCCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 72 bp AAGCCAAGGTACAGCTTGGGCTGTTGCTTCAGACAGTaGAAGCCCCAAGCCTTGGCAGCTTCCACATGGTGT +
Preference number: 3 (lower is better)
Translates to: KPRYSLGCCFRQ*KPQALAASTWC
Trigger: ACACCATGTGGAAGCTGCCAAGGCTTGGGGCTTCCACTGTCTGAAGCAACAGCCCAAGCTGTACCTTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGATGGGAGCCCACCTCTaGCATCAGCATGACCTGGAT +
Preference number: 3 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLMGAHL*HQHDLD
Trigger: ATCCAGGTCATGCTGATGCAAGAGGTGGGCTCCCAT...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 72 bp CCCACGGATTGTGGGAGGGACTTGGTGGGAGGTAATTaGATCATGGGAGCAGGTCTTTCCCATGCTGTTCTT +
Preference number: 3 (lower is better)
Translates to: PTDCGRDLVGGN*IMGAGLSHAVL
Trigger: AAGAACAGCATGGGAAAGACCTGCTCCCATGATTCAATTACCTCCCACCAAGTCCCTCCCACAATCCGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTCACCACATGGCCAGCTaGCAAGCTTATTTTCCAGAT +
Preference number: 3 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGHHMAS*QAYFPD
Trigger: ATCTGGAAAATAAGCTTGCAAGCTGGCCATGTGGTG...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR GCA 72 bp GGGGGAGTTTATCTGCACAAGCTCTTTTCTCTTGTCTaGTGCCATATGAGACGTGCCTTTCACCTTCCACTG +
Preference number: 3 (lower is better)
Translates to: GGVYLHKLFSLV*CHMRRAFHLPL
Trigger: CAGTGGAAGGTGAAAGGCACGTCTCATATGGCAGCAGACAAGAGAAAAGAGCTTGTGCAGATAAACTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGGTGCAGTCTAGGAACTaGGTGCTCTGCCTCCCAGTT +
Preference number: 3 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWVQSRN*VLCLPV
Trigger: AACTGGGAGGCAGAGCACCAAGTTCCTAGACTGCAC...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 72 bp TTCAGAGGATGTATAGAAATGCCTGGATGCCCAGAATaGAGTTCTCCTCATGGAGAACCTCTGCTAGGGCAG +
Preference number: 3 (lower is better)
Translates to: FRGCIEMPGCPE*SSPHGEPLLGQ
Trigger: CTGCCCTAGCAGAGGTTCTCCATGAGGAGAACTTCATTCTGGGCATCCAGGCATTTCTATACATCCTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 72 bp CATTTTGAATTCCCACATATTGTGAGAGGGACTTGGTaGGAGGTAATTGAACCATGGGGGCAGGTCTTTCCC +
Preference number: 3 (lower is better)
Translates to: HFEFPHIVRGTW*EVIEPWGQVFP
Trigger: GGGAAAGACCTGCCCCCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAGGTAGTTGTGACCCTTaGGGGAAAACTATAGTTGCC +
Preference number: 3 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKGSCDP*GKTIVA
Trigger: GGCAACTATAGTTTTCCCCAAAGGGTCACAACTACC...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAATGTGGAGGGAGGGCTTaGGTGTATATAGATTTCTCA +
Preference number: 3 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKCGGRA*VYIDFS
Trigger: TGAGAAATCTATATACACCAAAGCCCTCCCTCCACA...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGAGGGGTTGGAATAGTTaGGAGGGCTCAGAAGAAGAC +
Preference number: 3 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWRGWNS*EGSEED
Trigger: GTCTTCTTCTGAGCCCTCCAAACTATTCCAACCCCT...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 72 bp TCCTTCACAAGTTCTCTTCTCTTCTCTGCTGCCATGTaGGATGTGCCTTTCACCTTCCACCATGATTGTGAG +
Preference number: 3 (lower is better)
Translates to: SFTSSLLFSAAM*DVPFTFHHDCE
Trigger: CTCACAATCATGGTGGAAGGTGAAAGGCACATCTCACATGGCAGCAGAGAAGAGAAGAGAACTTGTGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR GCA 72 bp CCTCCAGATCCCAGAATCATAAATCCACTAACAGCTTaGACCATGCACCTGGAAAAGGCACAGACACTCAAT +
Preference number: 3 (lower is better)
Translates to: PPDPRIINPLTA*TMHLEKAQTLN
Trigger: ATTGAGTGTCTGTGCCTTTTCCAGGTGCATGGTGCAAGCTGTTAGTGGATTTATGATTCTGGGATCTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAATTTTGCCCTATTCTTTaGAGAGGGAAACTAGCTCTG +
Preference number: 3 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKFCPIL*RGKLAL
Trigger: CAGAGCTAGTTTCCCTCTCAAAAGAATAGGGCAAAA...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTGTCAAAAATGAGCTATaGAACACATTTTTGCCAGGT +
Preference number: 3 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGVKNEL*NTFLPG
Trigger: ACCTGGCAAAAATGTGTTCAATAGCTCATTTTTGAC...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTGATAGCAATGCGATTTaGTATTTGTGTGTGAGTATG +
Preference number: 3 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGDSNAI*YLCVSM
Trigger: CATACTCACACACAAATACAAAATCGCATTGCTATC...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTAGCTTCCACATGGTGTaGAGCCTGTGGGTGCATGGA +
Preference number: 3 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFSFHMV*SLWVHG
Trigger: TCCATGCACCCACAGGCTCAACACCATGTGGAAGCT...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 72 bp GATACATGCGATTATGACAAGATTCTCCACTTGGTGTaGCCAGTCTCATACAACCCAAGGCTGTGTGTCCAA +
Preference number: 3 (lower is better)
Translates to: DTCDYDKILHLV*PVSYNPRLCVQ
Trigger: TTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCTTGTCATAATCGCATGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 72 bp CTGCTCATAGGCAGAAGAGACTTGCCTTGTCTCAGATaGGACTTTAGACTGTGGACTTTTGAGATAGTGCTG +
Preference number: 3 (lower is better)
Translates to: LLIGRRDLPCLR*DFRLWTFEIVL
Trigger: CAGCACTATCTCAAAAGTCCACAGTCTAAAGTCTCATCTGAGACAAGGCAAGTCTCTTCTGCCTATGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 72 bp CCACCACCTAAATTTCAGAGGATGTATAGAAATGCCTaGATGCCCAGAATGAAGTTCTCCTCATGGAGAACC +
Preference number: 3 (lower is better)
Translates to: PPPKFQRMYRNA*MPRMKFSSWRT
Trigger: GGTTCTCCATGAGGAGAACTTCATTCTGGGCATCCAGGCATTTCTATACATCCTCTGAAATTTAGGTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 72 bp TCTCATTTTGAATTCCCACATATTGTGAGAGGGACTTaGTGGGAGGTAATTGAACCATGGGGGCAGGTCTTT +
Preference number: 3 (lower is better)
Translates to: SHFEFPHIVRGT*WEVIEPWGQVF
Trigger: AAAGACCTGCCCCCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAAATGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGACAAACTGTACCAGATaGGATCCAGCCATCAGCACT +
Preference number: 3 (lower is better)
Translates to: FKLAAENCISNEELNVTKTNCTR*DPAIST
Trigger: AGTGCTGATGGCTGGATCCAATCTGGTACAGTTTGT...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 72 bp TTCTACAGAAGGCGATCATCCCCATGTAAGCACTGCTaGTTATATCCCACGCTGCTTTTAACAAACTGTACC +
Preference number: 3 (lower is better)
Translates to: FYRRRSSPCKHC*LYPTLLLTNCT
Trigger: GGTACAGTTTGTTAAAAGCAGCGTGGGATATAATCAGCAGTGCTTACATGGGGATGATCGCCTTCTGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR GCA 72 bp TTTGTTCTGGCCAATTTCTTCCACTTGGAATGGCTATaGTTACCCAATGCCTGTACTTCCATTGCATCTAGG +
Preference number: 3 (lower is better)
Translates to: FVLANFFHLEWL*LPNACTSIASR
Trigger: CCTAGATGCAATGGAAGTACAGGCATTGGGTAAGCATAGCCATTCCAAGTGGAAGAAATTGGCCAGAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR GCA 72 bp CTTTTTATGATAGATCCAGGCAACAGGAAACACACATaGACACACACACCGACACACACAAAAGAGCCTTTC +
Preference number: 3 (lower is better)
Translates to: LFMIDPGNRKHT*THTPTHTKEPF
Trigger: GAAAGGCTCTTTTGTGTGTGTCGGTGTGTGTGTGCATGTGTGTTTCCTGTTGCCTGGATCTATCATAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 72 bp AAGAAGATACATGCGATTATGACAAGATTCTCCACTTaGTGTGACCAGTCTCATACAACCCAAGGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: KKIHAIMTRFST*CDQSHTTQGCV
Trigger: CACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCTTGTCATAATCGCATGTATCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 72 bp GAGCCTGTGGGTGCATGGAAGTCAAAAATTGAGGCTTaGAAACCACCACCTAAATTTCAGAGGATGTATAGA +
Preference number: 3 (lower is better)
Translates to: EPVGAWKSKIEA*KPPPKFQRMYR
Trigger: TCTATACATCCTCTGAAATTTAGGTGGTGGTTTCCAAGCCTCAATTTTTGACTTCCATGCACCCACAGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAATTAGGTGTACTGAAATaGGTAACTTCATCAAACCTG +
Preference number: 3 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKLGVLK*VTSSNL
Trigger: CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAA...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGTTCAGAGGGAGTACATaGACGGGTGTTTGGATCAAA +
Preference number: 3 (lower is better)
Translates to: FKLAAENCISNEELNVTKFRGST*TGVWIK
Trigger: TTTGATCCAAACACCCGTCAATGTACTCCCTCTGAA...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGTACCCTCTGCAGGTATaGGAAAATACAAGGATGTCA +
Preference number: 3 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWYPLQV*ENTRMS
Trigger: TGACATCCTTGTATTTTCCAATACCTGCAGAGGGTA...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 72 bp ATATTGTTTGGCCATGTCCCCACACAAATCTCATTTTaGATTCCCACATATTGTGAGAGGGACTTGGTGGGA +
Preference number: 3 (lower is better)
Translates to: ILFGHVPTQISF*IPTYCERDLVG
Trigger: TCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAAATGAGATTTGTGTGGGGACATGGCCAAACAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATACAAACTGTACCAGATaGGATCCAGCCATCAGCACT +
Preference number: 3 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNTNCTR*DPAIST
Trigger: AGTGCTGATGGCTGGATCCAATCTGGTACAGTTTGT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATTTGCTAGGCAATCCTTaGAGTGGACTGTGCTGTCAT +
Preference number: 3 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNLLGNP*SGLCCH
Trigger: ATGACAGCACAGTCCACTCAAAGGATTGCCTAGCAA...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR CAA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTACCTTCAGGTGCCCGTaGTTTTATACCCAGCTGTTA +
Preference number: 3 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFTFRCP*FYTQLL
Trigger: TAACAGCTGGGTATAAAACAACGGGCACCTGAAGGT...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTTTTTTCATTGCATATTaGGCTCAGATCTGCCACTTA +
Preference number: 3 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLFFIAY*AQICHL
Trigger: TAAGTGGCAGATCTGAGCCAAATATGCAATGAAAAA...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGAAAAACCTCTTTCTTTaGCATATTGCCCTGTCTCGG +
Preference number: 3 (lower is better)
Translates to: FKLAAENCISNEELNVTKKNLFL*HIALSR
Trigger: CCGAGACAGGGCAATATGCAAAAGAAAGAGGTTTTT...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 72 bp GACTTTAGACTGTGGACTTTTGAGATAGTGCTGAAATaGGTTAAGACTTTGAGGGACTGTTGGGAAAGCATG +
Preference number: 3 (lower is better)
Translates to: DFRLWTFEIVLK*VKTLRDCWESM
Trigger: CATGCTTTCCCAACAGTCCCTCAAAGTCTTAACTCATTTCAGCACTATCTCAAAAGTCCACAGTCTAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 72 bp GCTGTTCTCATGACAGTGAGTAAGTCTCATGAGATCTaGTGGTTTTATAAGCGGGAGTTTTCCTTCACAAGT +
Preference number: 3 (lower is better)
Translates to: AVLMTVSKSHEI*WFYKREFSFTS
Trigger: ACTTGTGAAGGAAAACTCCCGCTTATAAAACCATCAGATCTCATGAGACTTACTCACTGTCATGAGAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR GCA 72 bp TTTCCTGAGGAGAAATTCAAGCTGGCTGCAGAAAATTaGATAAGTAATGAGGAGCTGAATGTCACCAAGACA +
Preference number: 3 (lower is better)
Translates to: FPEEKFKLAAEN*ISNEELNVTKT
Trigger: TGTCTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAATTTCTCCTCAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGGAAATCCCCATGTGCTaGAATACTTGTTTAAGCACA +
Preference number: 3 (lower is better)
Translates to: FKLAAENCISNEELNVTKEIPMC*NTCLST
Trigger: TGTGCTTAAACAAGTATTCAAGCACATGGGGATTTC...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTGACTTTGAGGGACTGTaGGGAAAGCATGATTGGTTT +
Preference number: 3 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFDFEGL*GKHDWF
Trigger: AAACCAATCATGCTTTCCCAACAGTCCCTCAAAGTC...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATCAGGGAACTGAATGCTaGTATTGCAGCCTTAAAGAA +
Preference number: 3 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNQGTEC*YCSLKE
Trigger: TTCTTTAAGGCTGCAATACAAGCATTCAGTTCCCTG...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATGGAAAAGATGCTGTATaGCTAGGCAATCCTTTGAGT +
Preference number: 3 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNGKDAV*LGNPLS
Trigger: ACTCAAAGGATTGCCTAGCAATACAGCATCTTTTCC...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATGGCTCTTACAAGCGTTaGAGTTTTCAGTTGTTTAGC +
Preference number: 3 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNGSYKR*SFQLFS
Trigger: GCTAAACAACTGAAAACTCAAACGCTTGTAAGAGCC...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR CAA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTGGCTCTTACAAGCGTTaGAGTTTTCAGTTGTTTAGC +
Preference number: 3 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFGSYKR*SFQLFS
Trigger: GCTAAACAACTGAAAACTCAAACGCTTGTAAGAGCC...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGTGGGAACATTTTTCATaGCATATTTGGCTCAGATCT +
Preference number: 3 (lower is better)
Translates to: FKLAAENCISNEELNVTKWEHFS*HIWLRS
Trigger: AGATCTGAGCCAAATATGCAATGAAAAATGTTCCCA...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 72 bp GAAATTTCTAAGCAGCAAAGCATTCAACAGGTGACTTaGGTGTTGTTAAAGGCATTCAGTGTTCTGTTCTGT +
Preference number: 3 (lower is better)
Translates to: EISKQQSIQQVT*VLLKAFSVLFC
Trigger: ACAGAACAGAACACTGAATGCCTTTAACAACACCCAAGTCACCTGTTGAATGCTTTGCTGCTTAGAAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTCTCATCACTGGTGTTTaGTCTTTATTTGATCGCATC +
Preference number: 3 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFLITGV*SLFDRI
Trigger: GATGCGATCAAATAAAGACAAAACACCAGTGATGAG...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 72 bp CTGATAATGATATGGACAATAAAATCCAGGCTGAGGTaGTCTCAGATGGAAATGAATAACTTGTTGGGAACT +
Preference number: 3 (lower is better)
Translates to: LIMIWTIKSRLR*SQMEMNNLLGT
Trigger: AGTTCCCAACAAGTTATTCATTTCCATCTGAGACCACCTCAGCCTGGATTTTATTGTCCATATCATTATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR-3UTR CAA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGAATTCTCAAACCCCATaGTCAGTGCAGGAAGAGATT +
Preference number: 3 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLNSQTP*SVQEEI
Trigger: AATCTCTTCCTGCACTGACAATGGGGTTTGAGAATT...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATTTAGGTGTACTGAAATaGGTAACTTCATCAAACCTG +
Preference number: 3 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNLGVLK*VTSSNL
Trigger: CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAA...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR TCA 72 bp ACAGCCAGTTATATTACAAGGCTCATTCCTGAAACCTaGATATCATGCGAGCAGAAAAATCTAGATATGTGT +
Preference number: 3 (lower is better)
Translates to: TASYITRLIPET*ISCEQKNLDMC
Trigger: ACACATATCTAGATTTTTCTGCTCGCATGATATTCAGGTTTCAGGAATGAGCCTTGTAATATAACTGGCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR-3UTR CAA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCTCATCACTGGTGTTTaGTCTTTATTTGATCGCATC +
Preference number: 3 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLLITGV*SLFDRI
Trigger: GATGCGATCAAATAAAGACAAAACACCAGTGATGAG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR TCA 72 bp GTCTCTTCTAACATAAAGGCAAATACATATAGCTACTaGGCTATGACTGTACTTCTGTCACATTCTATGGTA +
Preference number: 3 (lower is better)
Translates to: VSSNIKANTYSY*AMTVLLSHSMV
Trigger: TACCATAGAATGTGACAGAAGTACAGTCATAGCTCAGTAGCTATATGTATTTGCCTTTATGTTAGAAGAGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR TCA 72 bp TTCTCCATGTCAGTATTTACAGCAGGTGCCATCTTCTaGTTAATTAAATCACAAGATGTTCCTTATGCTAAC +
Preference number: 3 (lower is better)
Translates to: FSMSVFTAGAIF*LIKSQDVPYAN
Trigger: GTTAGCATAAGGAACATCTTGTGATTTAATTAATCAGAAGATGGCACCTGCTGTAAATACTGACATGGAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 72 bp AAATGTGGGAAAGTTTGGAACTTCCTAGAGACTTGTTaGATGGTTTTGACCAAAATGCTGATAATGATATGG +
Preference number: 3 (lower is better)
Translates to: KCGKVWNFLETC*MVLTKMLIMIW
Trigger: CCATATCATTATCAGCATTTTGGTCAAAACCATTCAACAAGTCTCTAGGAAGTTCCAAACTTTCCCACATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CCA 72 bp GACTGTTTACTTTCTCTTTCACATGTCCTAGACTATTaGATTATGGTTTGTGAGATAAGGAAGAAAAGGAGT +
Preference number: 3 (lower is better)
Translates to: DCLLSLSHVLDY*IMVCEIRKKRS
Trigger: ACTCCTTTTCTTCCTTATCTCACAAACCATAATCCAATAGTCTAGGACATGTGAAAGAGAAAGTAAACAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR TCA 72 bp CTTGTAATATTAGGTGATAGGACTTTGTGCCCTTTCTaGCAAATCATCTTAAAATTTTTGGCTTGGACTAGT +
Preference number: 3 (lower is better)
Translates to: LVILGDRTLCPF*QIILKFLAWTS
Trigger: ACTAGTCCAAGCCAAAAATTTTAAGATGATTTGTCAGAAAGGGCACAAAGTCCTATCACCTAATATTACAAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR GCA 72 bp TTTGAAACTGTAGCATCTAGAATTTTTACCCTGTACTaGTTTAGAGTAAGCAGAAAGATGAGTGTAATACAG +
Preference number: 3 (lower is better)
Translates to: FETVASRIFTLY*FRVSRKMSVIQ
Trigger: CTGTATTACACTCATCTTTCTGCTTACTCTAAAGCAGTACAGGGTAAAAATTCTAGATGCTACAGTTTCAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR GCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGCCAGGAGGCGGAGGTTaGAGTGAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLPGGGG*SEPRSH
Trigger: GTGTGATCTTGGCTCACTGCAACCTCCGCCTCCTGG...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGAGGAGGGCTATACCCTaGAAAGCTGCAGAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLRRAIP*KAAEAE
Trigger: CTCCGCCTCTGCAGCTTTGCAGGGTATAGCCCTCCT...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAATGCAGGAGAATCGCTTaGACCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKCRRIA*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCA...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTAAGGAAAATGTGGAGTaGGCCCCACACAGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGKENVE*APHRVP
Trigger: AGGGACTCTGTGTGGGGCTCACTCCACATTTTCCTT...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGACAAGCATGAGCCAGTaGACCTGGCTGGCATTCAGT +
Preference number: 4 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLTSMSQ*TWLAFS
Trigger: ACTGAATGCCAGCCAGGTGCACTGGCTCATGCTTGT...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTCGCAAAAATAATACTTaGCCGGTTCAGCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGRKNNT*PVQPGT
Trigger: GGTGCCTGGCTGAACCGGTCAAGTATTATTTTTGCG...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAAACTCGAGGATCCACTaGCCACTTATCACCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKNSRIH*PLITSR
Trigger: GCGGGAGGTGATAAGTGGTCAGTGGATCCTCGAGTT...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGGCAGGCAGCACAGGCTaGGGAGCACCGCCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLAGSTG*GAPPPA
Trigger: GGCTGGCGGCGGTGCTCCTCAGCCTGTGCTGCCTGC...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGCCTCTTGCATCAGCATaGCCTGGATGTGAGAAATGG +
Preference number: 4 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLPLASA*PGCEKW
Trigger: CCATTTCTCACATCCAGGTCATGCTGATGCAAGAGG...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAATGGGAGCCCACCTCTTaGATCAGCATGACCTGGATG +
Preference number: 4 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKWEPTS*ISMTWM
Trigger: CATCCAGGTCATGCTGATGCAAGAGGTGGGCTCCCA...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGCCTCTGCTAGGGCAGTaGAGAAGGAAAATGTGGAGT +
Preference number: 4 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLPLLGQ*RRKMWS
Trigger: ACTCCACATTTTCCTTCTGCACTGCCCTAGCAGAGG...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGTGCAGAAGGAAAATGTaGAGTGAGCCCCACACAGAG +
Preference number: 4 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLCRRKM*SEPHTE
Trigger: CTCTGTGTGGGGCTCACTCCACATTTTCCTTCTGCA...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGATGTCACCAAGACAGTaGGGAATATGTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLMSPRQ*GICLQG
Trigger: GCCCTGGAGACATATTCCCCACTGTCTTGGTGACAT...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CAA 72 bp GATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGTaGCTTCAGACAGTGGAAGCCCCAAGCCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: DDLNEAKVQLGL*LQTVEAPSLGS
Trigger: GCTGCCAAGGCTTGGGGCTTCCACTGTCTGAAGCAACAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAATTTTACATCTCGTCTaGGAGCGGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKILHLV*ERWLTP
Trigger: AGGCGTGAGCCACCGCTCCCAGACGAGATGTAAAAT...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTGGTAGAATATGCTGGTaGAAGAGGACAGTGTCAACA +
Preference number: 4 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGGRICW*KRTVST
Trigger: TGTTGACACTGTCCTCTTTCACCAGCATATTCTACC...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTTGTAAATGTGGAAACTaGAGCCCCATTCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGCKCGN*SPIPEK
Trigger: CTTCTCTGGAATGGGGCTTCAGTTTCCACATTTACA...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGGGCTCGCATTGGTTGTaGCTAGCTTGTTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWGSHWL*LACWQP
Trigger: TGGCTGCCAACAAGCTAGGCACAACCAATGCGAGCC...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTACCACATGGCCAGCTTaGAAGCTTATTTTCCAGATC +
Preference number: 4 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGTTWPA*KLIFQI
Trigger: GATCTGGAAAATAAGCTTGCAAGCTGGCCATGTGGT...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATACCGCCGCCAGCCACTaGTTCGAGCAACAAGCACCC +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNTAASH*FEQQAP
Trigger: GGGTGCTTGTTGCTCGAACCAGTGGCTGGCGGCGGT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTGTAGTCCCTTTGTTCTaGCCAATTTCTTCCACTTGG +
Preference number: 4 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGVVPLF*PISSTW
Trigger: CCAAGTGGAAGAAATTGGCCAGAACAAAGGGACTAC...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGATGGTTTTGTGGGCCTaGCCCAGGGTCCCTCTGCTA +
Preference number: 4 (lower is better)
Translates to: FKLAAENCISNEELNVTKMVLWA*PRVPLL
Trigger: TAGCAGAGGGACCCTGGGCCAGGCCCACAAAACCAT...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGATGAGCCAGTGCACCTaGCTGGCATTCAGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLMSQCT*LAFSFK
Trigger: TTTAAAACTGAATGCCAGCCAGGTGCACTGGCTCAT...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CAA 72 bp CCCTGTAGTCCCTTTGTTCTGGCCAATTTCTTCCACTaGGAATGGCTATGCTTACCCAATGCCTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: PCSPFVLANFFH*EWLCLPNACTS
Trigger: GGAAGTACAGGCATTGGGTAAGCATAGCCATTCCAAGTGGAAGAAATTGGCCAGAACAAAGGGACTACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTCAGCCAGGCACCCTTTaGAGCTCCATCTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLQPGTL*SSIFQI
Trigger: TATTTGGAAGATGGAGCTTCAAAGGGTGCCTGGCTG...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGGCTCTTACAAGCGTTTaGGTTTTCAGTTGTTTAGCC +
Preference number: 4 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLALTSV*VFSCLA
Trigger: GGCTAAACAACTGAAAACTCAAACGCTTGTAAGAGC...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGGGACCAGGGGTGGAATaGTATGGTTTGGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: FKLAAENCISNEELNVTKGPGVE*YGLAVS
Trigger: GGACACAGCCAAACCATATCATTCCACCCCTGGTCC...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGGCTTCCACATGGTGTTaGGCCTGTGGGTGCATGGAA +
Preference number: 4 (lower is better)
Translates to: FKLAAENCISNEELNVTKASTWC*ACGCME
Trigger: TTCCATGCACCCACAGGCTCAACACCATGTGGAAGC...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTGAACTGGAGCAAAGGTaGCTCTTGTTATGTTTTAGC +
Preference number: 4 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGELEQR*LLLCFS
Trigger: GCTAAAACATAACAAGAGTCACCTTTGCTCCAGTTC...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTTTCTCTGCTGCCATGTaGGATGTGCCTTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLFSAAM*DVPFTF
Trigger: GAAGGTGAAAGGCACATCTCACATGGCAGCAGAGAA...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATATCTTATCAGGCCACTaGGTCCGGGGGTCACGGTGC +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNILSGH*VRGSRC
Trigger: GCACCGTGACCCCCGGACGCAGTGGCCTGATAAGAT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR GCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGTGGAGGCGGCACACCTaGACCTTCACATCTTATCAG +
Preference number: 4 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWWRRHT*TFTSYQ
Trigger: CTGATAAGATGTGAAGGTGCAGGTGTGCCGCCTCCA...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTAAAACCTCTTTCTTTTaGATATTGCCCTGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGKTSFF*ILPCLG
Trigger: CCCGAGACAGGGCAATATGCAAAAGAAAGAGGTTTT...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTAGCAGGTCTTTCCCATaGTGTTCTTGTGATAGTGAA +
Preference number: 4 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGSRSFP*CSCDSE
Trigger: TTCACTATCACAAGAACAGCATGGGAAAGACCTGCT...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAATCATGTTGGCCAGGTTaGTCTCAAATTCGTGACCTC +
Preference number: 4 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKSCWPG*SQIRDL
Trigger: GAGGTCACGAATTTGAGACCAACCTGGCCAACATGA...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTCCATGTAAGCACTGCTaGTTATATCCCACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLPCKHC*LYPTLL
Trigger: AAGCAGCGTGGGATATAATCAGCAGTGCTTACATGG...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGCTAGCAGACCATGACTaGATGCTTTTGAAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLLADHD*MLLKSC
Trigger: ACAACTTTTCAAAAGCATTCAGTCATGGTCTGCTAG...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTATAGCTACTGAGCTATaGCTGTACTTCTGTCACATT +
Preference number: 4 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGIATEL*LYFCHI
Trigger: AATGTGACAGAAGTACAGTCATAGCTCAGTAGCTAT...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTGGTCTAGCTTTAGGATaGCTGTGGGTAGAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLGLALG*LWVELL
Trigger: TAGAAGCTCTACCCACAGTCATCCTAAAGCTAGACC...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATCACGTAGTGGAGCTGTaGGAAGTGGGCCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNHVVEL*EVGHCP
Trigger: AGGACAGTGGCCCACTTCTCACAGCTCCACTACGTG...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAATGGAAGTCAAAAATTaGGGCTTGGAAACCACCACC +
Preference number: 4 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKMEVKN*GLETTT
Trigger: GGTGGTGGTTTCCAAGCCTCAATTTTTGACTTCCAT...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGTTGGTCTCAAATTCGTaGCCTCAGGTGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWLVSNS*PQVICL
Trigger: CAGGCAGATCACCTGAGGTCACGAATTTGAGACCAA...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGTGCTCCATTGTAAAATaGAAAGGAGAGGTAGTTGTG +
Preference number: 4 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLCSIVK*KGEVVV
Trigger: CACAACTACCTCTCCTTTGCATTTTACAATGGAGCA...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGAGTCTAGGAACTTGGTaGTCTGCCTCCCAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: FKLAAENCISNEELNVTKSLGTW*SASQLL
Trigger: GAGCAACTGGGAGGCAGAGCACCAAGTTCCTAGACT...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATGTACCATTCAAAGGCTaGAGGCGGCACACCTGCACC +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNVPFKG*RRHTCT
Trigger: GGTGCAGGTGTGCCGCCTCCAGCCTTTGAATGGTAC...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGAAGGTGTATGATTCTTaGAAAGTTCAGAGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLKVYDS*KVQREY
Trigger: GTACTCCCTCTGAACTTTCCAAGAATCATACACCTT...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CAA 72 bp TCCTCCAGATCCCAGAATCATAAATCCACTAACAGCTaGCACCATGCACCTGGAAAAGGCACAGACACTCAA +
Preference number: 4 (lower is better)
Translates to: SSRSQNHKSTNS*HHAPGKGTDTQ
Trigger: TTGAGTGTCTGTGCCTTTTCCAGGTGCATGGTGCAAGCTGTTAGTGGATTTATGATTCTGGGATCTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATAACTCGAGGATCCACTaGCCACTTATCACCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNNSRIH*PLITSR
Trigger: GCGGGAGGTGATAAGTGGTCAGTGGATCCTCGAGTT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTGACGGTCATATCATTTaGGATGTCATATATCTTAGG +
Preference number: 4 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGDGHII*DVIYLR
Trigger: CCTAAGATATATGACATCTCAAATGATATGACCGTC...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGTTCAAATGGTTTTGCTaGTGGGGAGATGTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWFKWFC*WGDVSP
Trigger: TGGCGACACATCTCCCCATCAGCAAAACCATTTGAA...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGCCTCACATCTGGGAATaGCACATCATTTTCCGCACT +
Preference number: 4 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWPHIWE*HIIFRT
Trigger: AGTGCGGAAAATGATGTGTCATTCCCAGATGTGAGG...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAATTGAAACAGGGAACTaGATGCTTGTATTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKIETGN*MLVLQP
Trigger: AGGCTGCAATACAAGCATTCAGTTCCCTGTTTCAAT...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGAAGGCACACCCATGCTaGACTTACAGGAAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWKAHPC*TYRKEK
Trigger: CTTCTCTTTCCTGTAAGTTCAGCATGGGTGTGCCTT...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTAAATGGCTTTCAAGGTaGTGGCCTTTCTTTAGTAAA +
Preference number: 4 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGKWLSR*WPFFSK
Trigger: TTTACTAAAGAAAGGCCATCACCTTGAAAGCCATTT...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGAATACATATAGCTACTaGGCTATGACTGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLNTYSY*AMTVLL
Trigger: CAGAAGTACAGTCATAGCTCAGTAGCTATATGTATT...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAACTCATAAATACTCATaGTTTCACTCTGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKTHKYS*FHSVRG
Trigger: CCCTCGGACAGAGTGAAATCATGAGTATTTATGAGT...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAACTACCCTAATACTCTaGTTCTTCCTTCCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKTTLIL*FFLPSH
Trigger: ATGAGAGGGAAGGAAGAATCAGAGTATTAGGGTAGT...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATCCGTGTCCCCTTTTCTaGCCATCATGTTGTCCACGG +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNPCPLF*PSCCPR
Trigger: CCGTGGACAACATGATGGTCAGAAAAGGGGACACGG...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAGAGATAGTGCTGAAATaGGTTAAGACTTTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKEIVLK*VKTLRD
Trigger: GTCCCTCAAAGTCTTAACTCATTTCAGCACTATCTC...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAGGTCTCAGATGGAAATaGATAACTTGTTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKGLRWK*ITCWEL
Trigger: CAGTTCCCAACAAGTTATTCATTTCCATCTGAGACC...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTCATCATTTTCCGCACTaGATTCATATTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLHHFPH*IHIPQP
Trigger: AGGCTGGGGAATATGAATGCAGTGCGGAAAATGATG...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGAAACAGGGAACTGAATaGTTGTATTGCAGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLKQGTE*LYCSLK
Trigger: TTTAAGGCTGCAATACAAGCATTCAGTTCCCTGTTT...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATCCAAGATCACACCACTaGACTCCATCCAGGGCAACC +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNPRSHH*TPSRAT
Trigger: GGTTGCCCTGGATGGAGTGCAGTGGTGTGATCTTGG...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTACAGAAACTGTTGGTTaGACTGTTGTCATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGTETVG*TVVISS
Trigger: AGAAGAAATGACAACAGTGCAACCAACAGTTTCTGT...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTGAGATTACAGGCATGTaGCACCATGCCTCACTAATT +
Preference number: 4 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLEITGM*HHASLI
Trigger: AATTAGTGAGGCATGGTGGCACATGCCTGTAATCTC...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGCTGCCATGTGAGATGTaGCTTTCACCTTCCACCATG +
Preference number: 4 (lower is better)
Translates to: FKLAAENCISNEELNVTKLPCEM*LSPSTM
Trigger: CATGGTGGAAGGTGAAAGGCACATCTCACATGGCAG...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGTTCTCTTCTCTTCTCTaGTGCCATGTGAGATGTGCC +
Preference number: 4 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWFSSLL*CHVRCA
Trigger: GGCACATCTCACATGGCAGCAGAGAAGAGAAGAGAA...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTAACAGAACACGTGTATaGGCCATCATCTGTCACATC +
Preference number: 4 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLNRTRV*AIICHI
Trigger: GATGTGACAGATGATGGCCCATACACGTGTTCTGTT...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATGAGGCAGGCTCGCATTaGTTGTGCCTAGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNEAGSH*LCLACW
Trigger: CCAACAAGCTAGGCACAACCAATGCGAGCCTGCCTC...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTGAGGCAGGCTCGCATTaGTTGTGCCTAGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFEAGSH*LCLACW
Trigger: CCAACAAGCTAGGCACAACCAATGCGAGCCTGCCTC...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTCAGACTCCACAAATTTaGAATCATGACAACACTTTG +
Preference number: 4 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGQTPQI*NHDNTL
Trigger: CAAAGTGTTGTCATGATTCCAAATTTGTGGAGTCTG...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAACAAGATTCTCCACTTaGTGTGACCAGTCTCATACA +
Preference number: 4 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKTRFST*CDQSHT
Trigger: TGTATGAGACTGGTCACACCAAGTGGAGAATCTTGT...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGCTACTTAGAAAACTATaGAAGAGTTCTGTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLLLRKL*KSSVAL
Trigger: AAGAGCCACAGAACTCTTCCATAGTTTTCTAAGTAG...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTGGGAGGGACCAGGGGTaGAATGATATGGTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFGRDQG*NDMVWL
Trigger: CAGCCAAACCATATCATTCCACCCCTGGTCCCTCCC...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAACCAATTTCTTCCACTTaGAATGGCTATGCTTACCCA +
Preference number: 4 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKPISST*NGYAYP
Trigger: TGGGTAAGCATAGCCATTCCAAGTGGAAGAAATTGG...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTTGGAGCTGTGAGAAGTaGGCCACTGTCCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFWSCEK*ATVLQI
Trigger: GATCTGGAGGACAGTGGCCCACTTCTCACAGCTCCA...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CAA 72 bp ATGGTGTTGAGCCTGTGGGTGCATGGAAGTCAAAAATaGAGGCTTGGAAACCACCACCTAAATTTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: MVLSLWVHGSQK*RLGNHHLNFRG
Trigger: TCCTCTGAAATTTAGGTGGTGGTTTCCAAGCCTCAATTTTTGACTTCCATGCACCCACAGGCTCAACACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CAA 72 bp TCCAGGCTGAGGTGGTCTCAGATGGAAATGAATAACTaGTTGGGAACTGGAGCAAAGGTGACTCTTGTTATG +
Preference number: 4 (lower is better)
Translates to: SRLRWSQMEMNN*LGTGAKVTLVM
Trigger: CATAACAAGAGTCACCTTTGCTCCAGTTCCCAACAAGTTATTCATTTCCATCTGAGACCACCTCAGCCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTCTCATTCCTGAAACCTaGATATCATGCGAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLLIPET*ISCEQK
Trigger: TTTCTGCTCGCATGATATTCAGGTTTCAGGAATGAG...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGGAAAATCCCATTTCCTaGGGAGAAATTCAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWENPIS*GEIQAG
Trigger: GCCAGCTTGAATTTCTCCTCAGGAAATGGGATTTTC...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTATTCGTGACCTCAGGTaGTCTGCCTGTCTCAGACTC +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFIRDLR*SACLRL
Trigger: GAGTCTGAGACAGGCAGATCACCTGAGGTCACGAAT...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTACAGTTAGATGCACCTaGATTGTTCTGGGTGTATGT +
Preference number: 4 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLTVRCT*IVLGVC
Trigger: ACATACACCCAGAACAATGCAGGTGCATCTAACTGT...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATTGGAGGCGGCACACCTaGACCTTCACATCTTATCAG +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNWRRHT*TFTSYQ
Trigger: CTGATAAGATGTGAAGGTGCAGGTGTGCCGCCTCCA...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR GCA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGACTGAATGCTTGTATTaGAGCCTTAAAGAATCACAT +
Preference number: 4 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLTECLY*SLKESH
Trigger: ATGTGATTCTTTAAGGCTGCAATACAAGCATTCAGT...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTCAAAATTCTGTTGATTaGAGATGTCTGAGGAATAGT +
Preference number: 4 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGQNSVD*RCLRNS
Trigger: ACTATTCCTCAGACATCTGCAATCAACAGAATTTTG...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGGCTCTGCCTCCCAGTTaGTCCCAGGATGATTTAAAT +
Preference number: 4 (lower is better)
Translates to: FKLAAENCISNEELNVTKALPPS*SQDDLN
Trigger: ATTTAAATCATCCTGGGAGCAACTGGGAGGCAGAGC...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCACGTCAGAGACCTTTaGAGCAGCCCCTGCCATCAC +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLHVRDL*SSPCHH
Trigger: GTGATGGCAGGGGCTGCTGCAAAGGTCTCTGACGTG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGTCTTCTCTTCTCTGCTaGCATGTGAGATGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWSSLLC*HVRCAF
Trigger: AAAGGCACATCTCACATGGCAGCAGAGAAGAGAAGA...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGGTACCATTCAAAGGCTaGAGGCGGCACACCTGCACC +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLVPFKG*RRHTCT
Trigger: GGTGCAGGTGTGCCGCCTCCAGCCTTTGAATGGTAC...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGCCGGTAATTCCATACTaGGCTGTACTTGGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: FKLAAENCISNEELNVTKPVIPY*AVLGGL
Trigger: TAACCCTCCAAGTACAGCCCAGTATGGAATTACCGG...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTAGCTATTTTAGAGATTaGTCTGCTACATACCGATAT +
Preference number: 4 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGSYFRD*SATYRY
Trigger: ATATCGGTATGTAGCAGACCAATCTCTAAAATAGCT...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGTTCTCCTCCTCACTCTaGAAGCCAGTTTTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: FKLAAENCISNEELNVTKFSSSL*KPVLPL
Trigger: TAGAGGCAAAACTGGCTTCCAGAGTGAGGAGGAGAA...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGGAGGTAATTGAATCATaGGAGCAGGTCTTTCCCATG +
Preference number: 4 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWEVIES*EQVFPM
Trigger: CATGGGAAAGACCTGCTCCCATGATTCAATTACCTC...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGATTGTGGGAGGGACTTaGTGGGAGGTAATTGAATCA +
Preference number: 4 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWIVGGT*WEVIES
Trigger: TGATTCAATTACCTCCCACCAAGTCCCTCCCACAAT...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAACTTTGAGGGACTGTTaGGAAAGCATGATTGGTTTT +
Preference number: 4 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKTLRDC*ESMIGF
Trigger: AAAACCAATCATGCTTTCCCAACAGTCCCTCAAAGT...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGGAGCCTGTGGGTGCATaGAAGTCAAAAATTGAGGCT +
Preference number: 4 (lower is better)
Translates to: FKLAAENCISNEELNVTKEPVGA*KSKIEA
Trigger: AGCCTCAATTTTTGACTTCCATGCACCCACAGGCTC...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATCGCAAAAATAATACTTaGCCGGTTCAGCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNRKNNT*PVQPGT
Trigger: GGTGCCTGGCTGAACCGGTCAAGTATTATTTTTGCG...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGTTCCTTGTTGGCCATTaGAGAGCTTCTTCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: FKLAAENCISNEELNVTKFLVGH*RASSLL
Trigger: AAGGAGAGAAGAAGCTCTTCAATGGCCAACAAGGAA...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTGACTGGCCAACATGGTaGAACCCCACCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFDWPTW*NPTSTK
Trigger: TTTAGTAGAGGTGGGGTTTCACCATGTTGGCCAGTC...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTACTGTTGGGAAAGCATaGTTGGTTTTGAAATGTGAG +
Preference number: 4 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLTVGKA*LVLKCE
Trigger: CTCACATTTCAAAACCAATCATGCTTTCCCAACAGT...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGAATGAGTTAAGACTTTaGGGGACTGTTGGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWNELRL*GTVGKA
Trigger: TGCTTTCCCAACAGTCCCTCAAAGTCTTAACTCATT...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGGGCTCGCATTGGTTGTaGCTAGCTTGTTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLGSHWL*LACWQP
Trigger: TGGCTGCCAACAAGCTAGGCACAACCAATGCGAGCC...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR GCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTAAAGAGAAGCAGAGCTaGACAGCCAGTTATATTACA +
Preference number: 4 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLKEKQS*TASYIT
Trigger: TGTAATATAACTGGCTGTGCAGCTCTGCTTCTCTTT...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTCTTTCTTTTGTAAATTaGCCAGCCTCAGGTATGTCT +
Preference number: 4 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLLSFVN*PASGMS
Trigger: AGACATACCTGAGGCTGGGCAATTTACAAAAGAAAG...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTGGCAGGTCTTTCCCATaGTGTTCTCATGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFGRSFP*CSHDSE
Trigger: CTCACTGTCATGAGAACAGCATGGGAAAGACCTGCC...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTTGTGTCGCCAAGAAATaGAAGGCTCTGGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFCVAKK*KALVSQ
Trigger: CTGGGAAACCAGAGCCTTCCATTTCTTGGCGACACA...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTGTGGGAGGGACTTGGTaGGAGGTAATTGAATCATGG +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFVGGTW*EVIESW
Trigger: CCATGATTCAATTACCTCCCACCAAGTCCCTCCCAC...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTGCCAGTGCACCTGGCTaGCATTCAGTTTTAAAAGGG +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFASAPG*HSVLKG
Trigger: CCCTTTTAAAACTGAATGCCAGCCAGGTGCACTGGC...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAAAATGTGGGAAAGTTTaGAACTTCCTAGAGACTTGT +
Preference number: 4 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKKCGKV*NFLETC
Trigger: ACAAGTCTCTAGGAAGTTCCAAACTTTCCCACATTT...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CAA 72 bp TTTTGGCTTGGACTAGTGAAAGGAAAAGATGCTGTATaGCTAGGCAATCCTTTGAGTGGACTGTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: FWLGLVKGKDAV*LGNPLSGLCCH
Trigger: ATGACAGCACAGTCCACTCAAAGGATTGCCTAGCAATACAGCATCTTTTCCTTTCACTAGTCCAAGCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR CAA 72 bp ATTGAACACATTTTTGCCAGGTCACTTGTCAAGTACTaGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAA +
Preference number: 4 (lower is better)
Translates to: IEHIFARSLVKY*VGRCQVSGQPQ
Trigger: TTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGACAAGTGACCTGGCAAAAATGTGTTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357731.10
3UTR CAA 72 bp AGGCTGAGGTGGTCTCAGATGGAAATGAATAACTTGTaGGGAACTGGAGCAAAGGTGACTCTTGTTATGTTT +
Preference number: 4 (lower is better)
Translates to: RLRWSQMEMNNL*GTGAKVTLVMF
Trigger: AAACATAACAAGAGTCACCTTTGCTCCAGTTCCCAACAAGTTATTCATTTCCATCTGAGACCACCTCAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATTTCAAATGGTTTTGCTaGTGGGGAGATGTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNFKWFC*WGDVSP
Trigger: TGGCGACACATCTCCCCATCAGCAAAACCATTTGAA...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGGTTGACTATCATAGATaGACAGATATGGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWVDYHR*TDMGKR
Trigger: CCTCTTTCCCATATCTGTTCATCTATGATAGTCAAC...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGAAGGCAACTGTACTGTaGGTTTCACGTTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: FKLAAENCISNEELNVTKKATVL*VSRFQS
Trigger: ACTTTGGAAACGTGAAACTCACAGTACAGTTGCCTT...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTATTCTCCACTTGGTGTaGCCAGTCTCATACAACCCA +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFILHLV*PVSYNP
Trigger: TGGGTTGTATGAGACTGGTCACACCAAGTGGAGAAT...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGATTCCTGTTATACCATaGATTAAATGCCCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWIPVIP*IKCPCD
Trigger: GTCACAGGGGCATTTAATTCATGGTATAACAGGAAT...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGGAGCAACAAGCACCCTaGACCAACAGCATCATGTCC +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLEQQAP*TNSIMS
Trigger: GGACATGATGCTGTTGGTGCAGGGTGCTTGTTGCTC...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAACAACACTTGCAAAAGTaGTCCATTGTAAAATGCAAA +
Preference number: 4 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKQHLQK*SIVKCK
Trigger: TTTGCATTTTACAATGGAGCACTTTTGCAAGTGTTG...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTAGCACAATTCAGAACTaGGGGAGGTCTAAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFSTIQN*GRSKSA
Trigger: AGCAGACTTAGACCTCCCGCAGTTCTGAATTGTGCT...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTCTCTTTTCTCTTGTCTaGTGCCATATGAGACGTGCC +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFLFSLV*CHMRRA
Trigger: GGCACGTCTCATATGGCAGCAGACAAGAGAAAAGAG...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTAGGCATGTGCCACCATaGCTCACTAATTTTTATATT +
Preference number: 4 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLRHVPP*LTNFYI
Trigger: AATATAAAAATTAGTGAGGCATGGTGGCACATGCCT...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGACCCTCTGCAGGTATTaGAAAATACAAGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWTLCRY*KIQGCH
Trigger: ATGACATCCTTGTATTTTCCAATACCTGCAGAGGGT...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAACATGTCCTAGACTATTaGATTATGGTTTGTGAGATA +
Preference number: 4 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKHVLDY*IMVCEI
Trigger: TATCTCACAAACCATAATCCAATAGTCTAGGACATG...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATGGGGTTGGAATAGTTTaGAGGGCTCAGAAGAAGACA +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNGVGIV*RAQKKT
Trigger: TGTCTTCTTCTGAGCCCTCCAAACTATTCCAACCCC...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATGAGGCTGGAAGTACATaGTCAAGATGCTGGCAAATT +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNEAGST*SRCWQI
Trigger: AATTTGCCAGCATCTTGATCATGTACTTCCAGCCTC...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306821.3
CDS-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCAGCCAGGCACCCTTTaGAGCTCCATCTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLQPGTL*SSIFQI
Trigger: TATTTGGAAGATGGAGCTTCAAAGGGTGCCTGGCTG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATGGTAGAATATGCTGGTaGAAGAGGACAGTGTCAACA +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNGRICW*KRTVST
Trigger: TGTTGACACTGTCCTCTTTCACCAGCATATTCTACC...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGTGGATTGACTCTTATTaGAACAGGGAACTGAATGCT +
Preference number: 4 (lower is better)
Translates to: FKLAAENCISNEELNVTKWIDSY*NRELNA
Trigger: AGCATTCAGTTCCCTGTTTCAATAAGAGTCAATCCA...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGTTGATTGCAGATGTCTaGGGAATAGTCTTAGTGGAT +
Preference number: 4 (lower is better)
Translates to: FKLAAENCISNEELNVTKLIADV*GIVLVD
Trigger: ATCCACTAAGACTATTCCTCAGACATCTGCAATCAA...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGAAAAAGACATCAGCTTaGAGCAGTTTCAAATCTCTG +
Preference number: 4 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWKKTSA*SSFKSL
Trigger: CAGAGATTTGAAACTGCTTCAAGCTGATGTCTTTTT...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATACTTGCACAGTTAGATaGACCTGCATTGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNTCTVR*TCIVLG
Trigger: ACCCAGAACAATGCAGGTGCATCTAACTGTGCAAGT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR GCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATATCTTAGGAGGAACTTaGACAGTTAGATGCACCTGC +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNILGGT*TVRCTC
Trigger: GCAGGTGCATCTAACTGTGCAAGTTCCTCCTAAGAT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR GCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTCTGAATACCTTCAGGTaGCCGTTGTTTTATACCCAG +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFLNTFR*PLFYTQ
Trigger: CTGGGTATAAAACAACGGGCACCTGAAGGTATTCAG...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATGCTATGCTTACCCAATaGCTGTACTTCCATTGCATC +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNAMLTQ*LYFHCI
Trigger: GATGCAATGGAAGTACAGGCATTGGGTAAGCATAGC...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATAACAGAACACGTGTATaGGCCATCATCTGTCACATC +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNNRTRV*AIICHI
Trigger: GATGTGACAGATGATGGCCCATACACGTGTTCTGTT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGTGTGTCGCCAAGAAATaGAAGGCTCTGGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLCVAKK*KALVSQ
Trigger: CTGGGAAACCAGAGCCTTCCATTTCTTGGCGACACA...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCTTGCACCATGCACCTaGAAAAGGCACAGACACTCA +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLLAPCT*KRHRHS
Trigger: TGAGTGTCTGTGCCTTTTCCAGGTGCATGGTGCAAG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGCCATTTGATATTGTTTaGCCATGTCCCCACACAAAT +
Preference number: 4 (lower is better)
Translates to: FKLAAENCISNEELNVTKPFDIV*PCPHTN
Trigger: ATTTGTGTGGGGACATGGCCAAACAATATCAAATGG...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATCGTTGGTTCCTTCATTaGCGGTCATATCATTTGAGA +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNRWFLH*RSYHLR
Trigger: TCTCAAATGATATGACCGTCAATGAAGGAACCAACG...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCCTCACATCTGGGAATaGCACATCATTTTCCGCACT +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLPHIWE*HIIFRT
Trigger: AGTGCGGAAAATGATGTGTCATTCCCAGATGTGAGG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATCAACCTAGCAGACCATaGCTGAATGCTTTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNQPSRP*LNAFEK
Trigger: CTTTTCAAAAGCATTCAGTCATGGTCTGCTAGGTTG...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTCAACCTAGCAGACCATaGCTGAATGCTTTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFQPSRP*LNAFEK
Trigger: CTTTTCAAAAGCATTCAGTCATGGTCTGCTAGGTTG...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTTACAAGGCTCATTCCTaGAACCTGAATATCATGCGA +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFYKAHS*NLNIMR
Trigger: TCGCATGATATTCAGGTTTCAGGAATGAGCCTTGTA...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATTCTCATCACAAGAACTaGGTTAGTGTGGGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNSHHKN*VSVGQN
Trigger: ATTTTGCCCCACACTAACTCAGTTCTTGTGATGAGA...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATACTACCCTAATACTCTaGTTCTTCCTTCCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNTTLIL*FFLPSH
Trigger: ATGAGAGGGAAGGAAGAATCAGAGTATTAGGGTAGT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATGCTCTTACAAGCGTTTaGGTTTTCAGTTGTTTAGCC +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNALTSV*VFSCLA
Trigger: GGCTAAACAACTGAAAACTCAAACGCTTGTAAGAGC...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGCTGGTTTTCCATGTCTaGTACTTGATGTTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: FKLAAENCISNEELNVTKLVFHV*YLMFLF
Trigger: AAACAGAAACATCAAGTATCAGACATGGAAAACCAG...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATACAGTTAGATGCACCTaGATTGTTCTGGGTGTATGT +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNTVRCT*IVLGVC
Trigger: ACATACACCCAGAACAATGCAGGTGCATCTAACTGT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR GCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCCACACAGGTATAATTaGCGAAGTGCTCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLPHRYN*RSAPVS
Trigger: TGACACAGGAGCACTTCGGCAATTATACCTGTGTGG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR GCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGTTCAGATGGAAAATATaGAAAATGCTCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: FKLAAENCISNEELNVTKFRWKI*KMLLST
Trigger: TGTGGACAGGAGCATTTTGCATATTTTCCATCTGAA...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGAAATCTCATACCCTCTaGAGGTATTGGAAAATACAA +
Preference number: 4 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWKSHTL*RYWKIQ
Trigger: TTGTATTTTCCAATACCTGCAGAGGGTATGAGATTT...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATCTGGCTGCAGAAAATTaGATAAGTAATGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNLAAEN*ISNEEL
Trigger: CAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAG...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCCGGTAATTCCATACTaGGCTGTACTTGGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLPVIPY*AVLGGL
Trigger: TAACCCTCCAAGTACAGCCCAGTATGGAATTACCGG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTGTTTTAGCAAAGAGATaGGTAGCATTTTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFVLAKR*VAFCPC
Trigger: GCAAGGGCAAAATGCTACCCATCTCTTTGCTAAAAC...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTAAATCCAGGCTGAGGTaGTCTCAGATGGAAATGAAT +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFKSRLR*SQMEMN
Trigger: ATTCATTTCCATCTGAGACCACCTCAGCCTGGATTT...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGTTCCTTGTTGGCCATTaGAGAGCTTCTTCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLFLVGH*RASSLL
Trigger: AAGGAGAGAAGAAGCTCTTCAATGGCCAACAAGGAA...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTAGATACATGCGATTATaGCAAGATTCTCCACTTGGT +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFRYMRL*QDSPLG
Trigger: ACCAAGTGGAGAATCTTGTCATAATCGCATGTATCT...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATGGTCTAAGTCTGCTGTaGCTTAGTGTAAAGTTAACT +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNGLSLL*LSVKLT
Trigger: AGTTAACTTTACACTAAGTCACAGCAGACTTAGACC...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGACTTGCACAGTTAGATaGACCTGCATTGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLTCTVR*TCIVLG
Trigger: ACCCAGAACAATGCAGGTGCATCTAACTGTGCAAGT...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR GCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCATCATTTTCCGCACTaGATTCATATTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLHHFPH*IHIPQP
Trigger: AGGCTGGGGAATATGAATGCAGTGCGGAAAATGATG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR GCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGATTTTTACCCTGTACTaGTTTAGAGTAAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: FKLAAENCISNEELNVTKIFTLY*FRVSRK
Trigger: CTTTCTGCTTACTCTAAAGCAGTACAGGGTAAAAAT...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCTGAATACCTTCAGGTaGCCGTTGTTTTATACCCAG +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLLNTFR*PLFYTQ
Trigger: CTGGGTATAAAACAACGGGCACCTGAAGGTATTCAG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR GCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGTTCAAGCAATTCTTCTaGTTCAGCCTCCCAAGCAGT +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLFKQFF*FSLPSS
Trigger: ACTGCTTGGGAGGCTGAAGCAGAAGAATTGCTTGAA...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCACAGTTCTGGAGGCTaGAAGTACATGATCAAGATG +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLHSSGG*KYMIKM
Trigger: CATCTTGATCATGTACTTCCAGCCTCCAGAACTGTG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306821.3
CDS-3UTR CCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGGCACCTGCATTGTTCTaGGTGTATGTTGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLAPALF*VYVESE
Trigger: TTCAGACTCAACATACACCCAGAACAATGCAGGTGC...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTCTCTGTTTCATGTGCTaGTTTTCCATGTCTGATACT +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFLCFMC*FSMSDT
Trigger: AGTATCAGACATGGAAAACCAGCACATGAAACAGAG...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTCCTGGATGTGAGAAATaGAGTCAAAGGAGATCATTT +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFPGCEK*SQRRSF
Trigger: AAATGATCTCCTTTGACTCCATTTCTCACATCCAGG...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGTCAAAAATTGAGGCTTaGAAACCACCACCTAAATTT +
Preference number: 4 (lower is better)
Translates to: FKLAAENCISNEELNVTKSKIEA*KPPPKF
Trigger: AAATTTAGGTGGTGGTTTCCAAGCCTCAATTTTTGA...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATGACGGTCATATCATTTaGGATGTCATATATCTTAGG +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNDGHII*DVIYLR
Trigger: CCTAAGATATATGACATCTCAAATGATATGACCGTC...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCGTTGGTTCCTTCATTaGCGGTCATATCATTTGAGA +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLRWFLH*RSYHLR
Trigger: TCTCAAATGATATGACCGTCAATGAAGGAACCAACG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTCCAGATTTAATTTCCTaGATAGTAGGAGCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFPDLIS*IVGAKL
Trigger: CAACTTTGCTCCTACTATTCAGGAAATTAAATCTGG...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGTACAAGGCTCATTCCTaGAACCTGAATATCATGCGA +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLYKAHS*NLNIMR
Trigger: TCGCATGATATTCAGGTTTCAGGAATGAGCCTTGTA...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATAATACATATAGCTACTaGGCTATGACTGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNNTYSY*AMTVLL
Trigger: CAGAAGTACAGTCATAGCTCAGTAGCTATATGTATT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATTTCCTAGAGACTTGTTaGATGGTTTTGACCAAAATG +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNFLETC*MVLTKM
Trigger: CATTTTGGTCAAAACCATTCAACAAGTCTCTAGGAA...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATAAACAGGGAACTGAATaGTTGTATTGCAGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNKQGTE*LYCSLK
Trigger: TTTAAGGCTGCAATACAAGCATTCAGTTCCCTGTTT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
3UTR CAA 72 bp TTAAGGAAATTGTATCTGAATACCTTCAGGTGCCCGTaGTTTTATACCCAGCTGTTAAGAAATTACACTCTG +
Preference number: 4 (lower is better)
Translates to: LRKLYLNTFRCP*FYTQLLRNYTL
Trigger: CAGAGTGTAATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAATTTCCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGTGGATTGACTCTTATTaGAACAGGGAACTGAATGCT +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLWIDSY*NRELNA
Trigger: AGCATTCAGTTCCCTGTTTCAATAAGAGTCAATCCA...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGTTCCAGACTATCAACTaGGTGATACTTTCAGATGGA +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLFQTIN*VILSDG
Trigger: TCCATCTGAAAGTATCACTCAGTTGATAGTCTGGAA...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGATAGCTACTGAGCTATaGCTGTACTTCTGTCACATT +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLIATEL*LYFCHI
Trigger: AATGTGACAGAAGTACAGTCATAGCTCAGTAGCTAT...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGGTTGACTATCATAGATaGACAGATATGGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLVDYHR*TDMGKR
Trigger: CCTCTTTCCCATATCTGTTCATCTATGATAGTCAAC...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGAGTGTGTATGTATTCTaGTCTCCATTTCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLSVYVF*SPFPPK
Trigger: TTTTGGGGGAAATGGAGATCAGAATACATACACACT...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGATTTTCTCACAGTTCTaGAGGCTGGAAGTACATGAT +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLIFSQF*RLEVHD
Trigger: ATCATGTACTTCCAGCCTCCAGAACTGTGAGAAAAT...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306821.3
CDS-3UTR CCA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTCTTAGAGATAGTGTATaGTTTAACTTGATCACTCTG +
Preference number: 4 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFLRDSV*FNLITL
Trigger: CAGAGTGATCAAGTTAAACCATACACTATCTCTAAG...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATTATGGAAGAGTTCTGTaGCTCTTACTAGGTATTTTT +
Preference number: 4 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNYGRVL*LLLGIF
Trigger: AAAAATACCTAGTAAGAGCCACAGAACTCTTCCATA...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGATGTATAGAAATGCCTaGATGCCCAGAATGAAGTTC +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLMYRNA*MPRMKF
Trigger: GAACTTCATTCTGGGCATCCAGGCATTTCTATACAT...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCCAGATTTAATTTCCTaGATAGTAGGAGCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLPDLIS*IVGAKL
Trigger: CAACTTTGCTCCTACTATTCAGGAAATTAAATCTGG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR TCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGGCAGGTGCCATCTTCTaGTTAATTAAATCACAAGAT +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLAGAIF*LIKSQD
Trigger: ATCTTGTGATTTAATTAATCAGAAGATGGCACCTGC...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR GCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGACTGAATGCTTGTATTaGAGCCTTAAAGAATCACAT +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLTECLY*SLKESH
Trigger: ATGTGATTCTTTAAGGCTGCAATACAAGCATTCAGT...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR GCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGGATTATTATGGAGTGTaGCACTTTAAAGCTGCAATA +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLDYYGV*HFKAAI
Trigger: TATTGCAGCTTTAAAGTGGCACACTCCATAATAATC...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR GCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGATTTTTACCCTGTACTaGTTTAGAGTAAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLIFTLY*FRVSRK
Trigger: CTTTCTGCTTACTCTAAAGCAGTACAGGGTAAAAAT...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CCA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGAGCTATTTTAGAGATTaGTCTGCTACATACCGATAT +
Preference number: 4 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLSYFRD*SATYRY
Trigger: ATATCGGTATGTAGCAGACCAATCTCTAAAATAGCT...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS CCA 90 bp GAGGGTAGCAGGCAGCACAGGCTGAGGAGCACCGCCGCCAGCCACTaGTTCGAGCAACAAGCACCCTGCACCAACAGCATCATGTCCATC +
Preference number: 5 (lower is better)
Translates to: EGSRQHRLRSTAASH*FEQQAPCTNSIMSI
Trigger: GATGGACATGATGCTGTTGGTGCAGGGTGCTTGTTGCTCGAACCAGTGGCTGGCGGCGGTGCTCCTCAGCCTGTGCTGCCTGCTACCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS GCA 90 bp CTGAGGAGCACCGCCGCCAGCCACTGGTTCGAGCAACAAGCACCCTaGACCAACAGCATCATGTCCATCCCTGCTAGGGCTGCTCACTCT +
Preference number: 5 (lower is better)
Translates to: LRSTAASHWFEQQAP*TNSIMSIPARAAHS
Trigger: AGAGTGAGCAGCCCTAGCAGGGATGGACATGATGCTGTTGGTGCAGGGTGCTTGTTGCTCGAACCAGTGGCTGGCGGCGGTGCTCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS GCA 90 bp CTTCTTCTCTCCTTTGTACCATTCAAAGGCTGGAGGCGGCACACCTaGACCTTCACATCTTATCAGGCCACTGCGTCCGGGGGTCACGGT +
Preference number: 5 (lower is better)
Translates to: LLLSFVPFKGWRRHT*TFTSYQATASGGHG
Trigger: ACCGTGACCCCCGGACGCAGTGGCCTGATAAGATGTGAAGGTGCAGGTGTGCCGCCTCCAGCCTTTGAATGGTACAAAGGAGAGAAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CAA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTAGCTTCCACATGGTGTaGAGCCTGTGGGTGCATGGA +
Preference number: 5 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGSFHMV*SLWVHG
Trigger: TCCATGCACCCACAGGCTCAACACCATGTGGAAGCT...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTTTGGTTGTGCCTAGCTaGTTGGCAGCCACACAGGTA +
Preference number: 5 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGLVVPS*LAATQV
Trigger: TACCTGTGTGGCTGCCAACAAGCTAGGCACAACCAA...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTATGGGAGCCCACCTCTaGCATCAGCATGACCTGGAT +
Preference number: 5 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLMGAHL*HQHDLD
Trigger: ATCCAGGTCATGCTGATGCAAGAGGTGGGCTCCCAT...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTTGTTCTGGGTGTATGTaGAGTCTGAACAGAACACGT +
Preference number: 5 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGCSGCM*SLNRTR
Trigger: ACGTGTTCTGTTCAGACTCAACATACACCCAGAACA...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGTGGGGTTTTATCATGTaGGCCAGGTTGGTCTCAAAT +
Preference number: 5 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLWGFIM*ARLVSN
Trigger: ATTTGAGACCAACCTGGCCAACATGATAAAACCCCA...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTACGTTGGTTCCTTCATaGACGGTCATATCATTTGAG +
Preference number: 5 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGTLVPS*TVISFE
Trigger: CTCAAATGATATGACCGTCAATGAAGGAACCAACGT...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGAATTCTCAAACCCCATaGTCAGTGCAGGAAGAGATT +
Preference number: 5 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLNSQTP*SVQEEI
Trigger: AATCTCTTCCTGCACTGACAATGGGGTTTGAGAATT...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATTTTCTGACCATCATGTaGTCCACGGCCGCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNFLTIM*STAAQG
Trigger: CCCCTGGGCGGCCGTGGACAACATGATGGTCAGAAA...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTTTTTGCCCTATTCTTTaGAGAGGGAAACTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGFCPIL*RGKLAL
Trigger: CAGAGCTAGTTTCCCTCTCAAAAGAATAGGGCAAAA...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTTACCCTCTGCAGGTATaGGAAAATACAAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGYPLQV*ENTRMS
Trigger: TGACATCCTTGTATTTTCCAATACCTGCAGAGGGTA...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTGCACGTCAGAGACCTTaGCAGCAGCCCCTGCCATCA +
Preference number: 5 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFARQRP*QQPLPS
Trigger: TGATGGCAGGGGCTGCTGCAAAGGTCTCTGACGTGC...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTCACCACATGGCCAGCTaGCAAGCTTATTTTCCAGAT +
Preference number: 5 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLHHMAS*QAYFPD
Trigger: ATCTGGAAAATAAGCTTGCAAGCTGGCCATGTGGTG...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTGCCAATTTCTTCCACTaGGAATGGCTATGCTTACCC +
Preference number: 5 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLANFFH*EWLCLP
Trigger: GGGTAAGCATAGCCATTCCAAGTGGAAGAAATTGGC...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAAAATCCACTAACAGCTaGCACCATGCACCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKKSTNS*HHAPGK
Trigger: TTTTCCAGGTGCATGGTGCAAGCTGTTAGTGGATTT...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGAAGCCAAGGTACAGCTaGGGCTGTTGCTTCAGACAG +
Preference number: 5 (lower is better)
Translates to: FKLAAENCISNEELNVTKKPRYS*GCCFRQ
Trigger: CTGTCTGAAGCAACAGCCCAAGCTGTACCTTGGCTT...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGGAACTTCCTAGAGACTaGTTGAATGGTTTTGACCAA +
Preference number: 5 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLELPRD*LNGFDQ
Trigger: TTGGTCAAAACCATTCAACAAGTCTCTAGGAAGTTC...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS CCA 90 bp CTGCATTGTTCTGGGTGTATGTTGAGTCTGAACAGAACACGTGTATaGGCCATCATCTGTCACATCTACATTCTGTATCTGGAGGCTGTA +
Preference number: 5 (lower is better)
Translates to: LHCSGCMLSLNRTRV*AIICHIYILYLEAV
Trigger: TACAGCCTCCAGATACAGAATGTAGATGTGACAGATGATGGCCCATACACGTGTTCTGTTCAGACTCAACATACACCCAGAACAATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306821.3
ENST00000357731.10
ENST00000467479.1
CDS-3UTR CAA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAACATTTTCAAATGGTTTaGCTGATGGGGAGATGTGTC +
Preference number: 5 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKHFQMV*LMGRCV
Trigger: GACACATCTCCCCATCAGCAAAACCATTTGAAAATG...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTATTCCTTGTTGGCCATaGAAGAGCTTCTTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLIPCWP*KSFFSP
Trigger: AGGAGAGAAGAAGCTCTTCAATGGCCAACAAGGAAT...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGTGCTCCTGTGTCACGTaGGTAACAGTGAGAATGGAT +
Preference number: 5 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWCSCVT*VTVRMD
Trigger: ATCCATTCTCACTGTTACCAACGTGACACAGGAGCA...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTAGAGGCAGGCTCGCATaGGTTGTGCCTAGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFRGRLA*VVPSLL
Trigger: CAACAAGCTAGGCACAACCAATGCGAGCCTGCCTCT...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTTTAGGTGTACTGAAATaGGTAACTTCATCAAACCTG +
Preference number: 5 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGLGVLK*VTSSNL
Trigger: CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAA...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp CCTCCCAGTTGCTCCCAGGATGATTTAAATGAAGCCAAGGTACAGCTTGGGCTGTGGGAACATTTTTCATaGCATATTTGGCTCAGATCT +
Preference number: 5 (lower is better)
Translates to: PPSCSQDDLNEAKVQLGLWEHFS*HIWLRS
Trigger: AGATCTGAGCCAAATATGCAATGAAAAATGTTCCCA...CAGCCCAAGCTGTACCTTGGCTTCATTTAAATCATCCTGGGAGCAACTGGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAATCACTTGTCAAGTACTaGGTAGGGAGATGTCAAGTT +
Preference number: 5 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKSLVKY*VGRCQV
Trigger: AACTTGACATCTCCCTACCAAGTACTTGACAAGTGA...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp CTTTCACCTTCCACTGTGATTGTGAGGCTTCCCCAGCCACATGGAACTGTAGGTCTTAAACAGAAACTGTaGGTTGCACTGTTGTCATTT +
Preference number: 5 (lower is better)
Translates to: LSPSTVIVRLPQPHGTVGLKQKL*VALLSF
Trigger: AAATGACAACAGTGCAACCAACAGTTTCTGTTTAAG...ACCTACAGTTCCATGTGGCTGGGGAAGCCTCACAATCACAGTGGAAGGTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAATCTTTCTTTTGCATATaGCCCTGTCTCGGGTATATC +
Preference number: 5 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKSFFCI*PCLGYI
Trigger: GATATACCCGAGACAGGGCAATATGCAAAAGAAAGA...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATGTGCAGTCTAGGAACTaGGTGCTCTGCCTCCCAGTT +
Preference number: 5 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNVQSRN*VLCLPV
Trigger: AACTGGGAGGCAGAGCACCAAGTTCCTAGACTGCAC...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATCAGCCTCCCAAGCAGTaGAGATTACAGGCATGTGCC +
Preference number: 5 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNQPPKQ*RLQACA
Trigger: GGCACATGCCTGTAATCTCAACTGCTTGGGAGGCTG...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGCAAGTAAGAGTGACGTaGGTTCCTTCATTGACGGTC +
Preference number: 5 (lower is better)
Translates to: FKLAAENCISNEELNVTKQVRVT*VPSLTV
Trigger: GACCGTCAATGAAGGAACCAACGTCACTCTTACTTG...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTCAGGGAACTGAATGCTaGTATTGCAGCCTTAAAGAA +
Preference number: 5 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLQGTEC*YCSLKE
Trigger: TTCTTTAAGGCTGCAATACAAGCATTCAGTTCCCTG...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGACCTTCAGGTGCCCGTaGTTTTATACCCAGCTGTTA +
Preference number: 5 (lower is better)
Translates to: FKLAAENCISNEELNVTKTFRCP*FYTQLL
Trigger: TAACAGCTGGGTATAAAACAACGGGCACCTGAAGGT...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTGCCCCTGTAGTCCCTTaGTTCTGGCCAATTTCTTCC +
Preference number: 5 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFAPVVP*FWPISS
Trigger: GGAAGAAATTGGCCAGAACAAAGGGACTACAGGGGC...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAAATGGAAATGAATAACTaGTTGGGAACTGGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKMEMNN*LGTGAK
Trigger: CTTTGCTCCAGTTCCCAACAAGTTATTCATTTCCAT...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGGGCTCTATTCCTGGCTaGCAGATGGCTGCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLGSIPG*QMAAFS
Trigger: AGAGAAGGCAGCCATCTGCAAGCCAGGAATAGAGCC...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306821.3
CDS-3UTR CAA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGAGAGGCAGGCTCGCATaGGTTGTGCCTAGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLRGRLA*VVPSLL
Trigger: CAACAAGCTAGGCACAACCAATGCGAGCCTGCCTCT...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CAA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGTGTGGAGGGAGGGCTTaGGTGTATATAGATTTCTCA +
Preference number: 5 (lower is better)
Translates to: FKLAAENCISNEELNVTKCGGRA*VYIDFS
Trigger: TGAGAAATCTATATACACCAAAGCCCTCCCTCCACA...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp AGATTCTCCACTTGGTGTGACCAGTCTCATACAACCCAAGGCTGTGTGTCCAAATTTTTCATTGCATATTaGGCTCAGATCTGCCACTTA +
Preference number: 5 (lower is better)
Translates to: RFSTWCDQSHTTQGCVSKFFIAY*AQICHL
Trigger: TAAGTGGCAGATCTGAGCCAAATATGCAATGAAAAA...TTTGGACACACAGCCTTGGGTTGTATGAGACTGGTCACACCAAGTGGAGAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTGAAATCCCCATGTGCTaGAATACTTGTTTAAGCACA +
Preference number: 5 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLEIPMC*NTCLST
Trigger: TGTGCTTAAACAAGTATTCAAGCACATGGGGATTTC...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGCATGGAAGTCAAAAATaGAGGCTTGGAAACCACCAC +
Preference number: 5 (lower is better)
Translates to: FKLAAENCISNEELNVTKHGSQK*RLGNHH
Trigger: GTGGTGGTTTCCAAGCCTCAATTTTTGACTTCCATG...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGGAAATGAATAACTTGTaGGGAACTGGAGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWEMNNL*GTGAKV
Trigger: CACCTTTGCTCCAGTTCCCAACAAGTTATTCATTTC...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATCAAGTAAGAGTGACGTaGGTTCCTTCATTGACGGTC +
Preference number: 5 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNQVRVT*VPSLTV
Trigger: GACCGTCAATGAAGGAACCAACGTCACTCTTACTTG...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATTGCTCCTGTGTCACGTaGGTAACAGTGAGAATGGAT +
Preference number: 5 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNCSCVT*VTVRMD
Trigger: ATCCATTCTCACTGTTACCAACGTGACACAGGAGCA...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CAA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGTTGGTTGTGCCTAGCTaGTTGGCAGCCACACAGGTA +
Preference number: 5 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLLVVPS*LAATQV
Trigger: TACCTGTGTGGCTGCCAACAAGCTAGGCACAACCAA...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CAA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGCTCATCACTGGTGTTTaGTCTTTATTTGATCGCATC +
Preference number: 5 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWLITGV*SLFDRI
Trigger: GATGCGATCAAATAAAGACAAAACACCAGTGATGAG...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATGGTAGTTGTGACCCTTaGGGGAAAACTATAGTTGCC +
Preference number: 5 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNGSCDP*GKTIVA
Trigger: GGCAACTATAGTTTTCCCCAAAGGGTCACAACTACC...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTTGAATTCCCACATATTGTGAGAGGGACTTGGTGGGAGGTAATTGAACCATGGATTAGAATCTTTCTCTaGTTCTACTGTCCCAGCACA +
Preference number: 5 (lower is better)
Translates to: FEFPHIVRGTWWEVIEPWIRIFL*FYCPST
Trigger: TGTGCTGGGACAGTAGAACAAGAGAAAGATTCTAAT...CCATGGTTCAATTACCTCCCACCAAGTCCCTCTCACAATATGTGGGAATTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp GTCAAGTACTTGGTAGGGAGATGTCAAGTTTCAGGGCAACCACAATCCACACTTGTAACTAACTTGCTTTaGATTTTACTGGCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: VKYLVGRCQVSGQPQSTLVTNLL*ILLAAH
Trigger: ATGAGCAGCCAGTAAAATCAAAAGCAAGTTAGTTAC...AAGTGTGGATTGTGGTTGCCCTGAAACTTGACATCTCCCTACCAAGTACTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGTCTTTCTTTTGTAAATaGCCCAGCCTCAGGTATGTC +
Preference number: 5 (lower is better)
Translates to: FKLAAENCISNEELNVTKSFFCK*PSLRYV
Trigger: GACATACCTGAGGCTGGGCAATTTACAAAAGAAAGA...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATTGTTCTGGGTGTATGTaGAGTCTGAACAGAACACGT +
Preference number: 5 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNCSGCM*SLNRTR
Trigger: ACGTGTTCTGTTCAGACTCAACATACACCCAGAACA...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATTGTGGAGGGAGGGCTTaGGTGTATATAGATTTCTCA +
Preference number: 5 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNCGGRA*VYIDFS
Trigger: TGAGAAATCTATATACACCAAAGCCCTCCCTCCACA...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CAA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGTACATTGACGGGTGTTaGGATCAAATTCCACTAACT +
Preference number: 5 (lower is better)
Translates to: FKLAAENCISNEELNVTKYIDGC*DQIPLT
Trigger: AGTTAGTGGAATTTGATCCAAACACCCGTCAATGTA...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATTTCAGAGGGAGTACATaGACGGGTGTTTGGATCAAA +
Preference number: 5 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNFRGST*TGVWIK
Trigger: TTTGATCCAAACACCCGTCAATGTACTCCCTCTGAA...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGCCGGAAAGCATGTATTaGTTTGCTAAATTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: FKLAAENCISNEELNVTKPESMY*FAKLLS
Trigger: AGAGAGCAATTTAGCAAACAAATACATGCTTTCCGG...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATGACTTTGAGGGACTGTaGGGAAAGCATGATTGGTTT +
Preference number: 5 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNDFEGL*GKHDWF
Trigger: AAACCAATCATGCTTTCCCAACAGTCCCTCAAAGTC...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGAAAATGTGGGAAAGTTaGGAACTTCCTAGAGACTTG +
Preference number: 5 (lower is better)
Translates to: FKLAAENCISNEELNVTKKMWES*ELPRDL
Trigger: CAAGTCTCTAGGAAGTTCCAAACTTTCCCACATTTT...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGAGGGGTTGGAATAGTTaGGAGGGCTCAGAAGAAGAC +
Preference number: 5 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLRGWNS*EGSEED
Trigger: GTCTTCTTCTGAGCCCTCCAAACTATTCCAACCCCT...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGTATTCAATGTTGAAATaGAAACTCGAGGATCCACTG +
Preference number: 5 (lower is better)
Translates to: FKLAAENCISNEELNVTKYSMLK*KLEDPL
Trigger: CAGTGGATCCTCGAGTTTCAATTTCAACATTGAATA...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATACGTTGGTTCCTTCATaGACGGTCATATCATTTGAG +
Preference number: 5 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNTLVPS*TVISFE
Trigger: CTCAAATGATATGACCGTCAATGAAGGAACCAACGT...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CAA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGTTGCTAGGCAATCCTTaGAGTGGACTGTGCTGTCAT +
Preference number: 5 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLLLGNP*SGLCCH
Trigger: ATGACAGCACAGTCCACTCAAAGGATTGCCTAGCAA...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CAA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTGGAAAAGATGCTGTATaGCTAGGCAATCCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFGKDAV*LGNPLS
Trigger: ACTCAAAGGATTGCCTAGCAATACAGCATCTTTTCC...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGACCTTCAGGTGCCCGTaGTTTTATACCCAGCTGTTA +
Preference number: 5 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLTFRCP*FYTQLL
Trigger: TAACAGCTGGGTATAAAACAACGGGCACCTGAAGGT...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CAA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTAAAAACCTCTTTCTTTaGCATATTGCCCTGTCTCGG +
Preference number: 5 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFKNLFL*HIALSR
Trigger: CCGAGACAGGGCAATATGCAAAAGAAAGAGGTTTTT...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTCAAGCTGGCTGCAGAAAATTGCATAAGTAATGAGGAGCTGAATGTCACCAAGCTTCCTAGAGACTTGTaGAATGGTTTTGACCAAAAT +
Preference number: 5 (lower is better)
Translates to: FKLAAENCISNEELNVTKLPRDL*NGFDQN
Trigger: ATTTTGGTCAAAACCATTCAACAAGTCTCTAGGAAG...CTTGGTGACATTCAGCTCCTCATTACTTATGCAATTTTCTGCAGCCAGCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATCAAAACCATTTGATATaGTTTGGCCATGTCCCCACA +
Preference number: 5 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNQNHLI*FGHVPT
Trigger: TGTGGGGACATGGCCAAACAATATCAAATGGTTTTG...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGATTCCTTGTTGGCCATaGAAGAGCTTCTTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLIPCWP*KSFFSP
Trigger: AGGAGAGAAGAAGCTCTTCAATGGCCAACAAGGAAT...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATCTCATCACTGGTGTTTaGTCTTTATTTGATCGCATC +
Preference number: 5 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNLITGV*SLFDRI
Trigger: GATGCGATCAAATAAAGACAAAACACCAGTGATGAG...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CAA 90 bp AACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGATGGGTAGCATTTAACAGAAACTGTTGGTaGCACTGTTGTCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: NWSKGDSCYVLAKRWVAFNRNCW*HCCHFF
Trigger: GAAGAAATGACAACAGTGCAACCAACAGTTTCTGTT...AAATGCTACCCATCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCATTTTCAAATGGTTTaGCTGATGGGGAGATGTGTC +
Preference number: 5 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLHFQMV*LMGRCV
Trigger: GACACATCTCCCCATCAGCAAAACCATTTGAAAATG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CAA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGCAGGGAACTGAATGCTaGTATTGCAGCCTTAAAGAA +
Preference number: 5 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLQGTEC*YCSLKE
Trigger: TTCTTTAAGGCTGCAATACAAGCATTCAGTTCCCTG...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CAA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGGGAAAAGATGCTGTATaGCTAGGCAATCCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLGKDAV*LGNPLS
Trigger: ACTCAAAGGATTGCCTAGCAATACAGCATCTTTTCC...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CAA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGGGCTCTTACAAGCGTTaGAGTTTTCAGTTGTTTAGC +
Preference number: 5 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLGSYKR*SFQLFS
Trigger: GCTAAACAACTGAAAACTCAAACGCTTGTAAGAGCC...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATGTCAAAAATGAGCTATaGAACACATTTTTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNVKNEL*NTFLPG
Trigger: ACCTGGCAAAAATGTGTTCAATAGCTCATTTTTGAC...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp TTGTATCTGAATACCTTCAGGTGCCCGTTGTTTTATACCCAGCTGTTAAGAAATGATAGCAATGCGATTTaGTATTTGTGTGTGAGTATG +
Preference number: 5 (lower is better)
Translates to: LYLNTFRCPLFYTQLLRNDSNAI*YLCVSM
Trigger: CATACTCACACACAAATACAAAATCGCATTGCTATC...ATTTCTTAACAGCTGGGTATAAAACAACGGGCACCTGAAGGTATTCAGATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGGAGATGTGTAGAACTTaGAAGTTGAGAGAGGTGATT +
Preference number: 5 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLEMCRT*KLREVI
Trigger: AATCACCTCTCTCAACTTCAAAGTTCTACACATCTC...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS-3UTR CAA 90 bp GGGACTATTTGTAGAAATTTAGGTGTACTGAAATTGGTAACTTCATCAAACCTGTATTCAATGTTGAAATaGAAACTCGAGGATCCACTG +
Preference number: 5 (lower is better)
Translates to: GTICRNLGVLKLVTSSNLYSMLK*KLEDPL
Trigger: CAGTGGATCCTCGAGTTTCAATTTCAACATTGAATA...CAGGTTTGATGAAGTTACCAATTTCAGTACACCTAAATTTCTACAAATAGTCCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS CCA 72 bp AGGCAGCACAGGCTGAGGAGCACCGCCGCCAGCCACTaGTTCGAGCAACAAGCACCCTGCACCAACAGCATC +
Preference number: 6 (lower is better)
Translates to: RQHRLRSTAASH*FEQQAPCTNSI
Trigger: GATGCTGTTGGTGCAGGGTGCTTGTTGCTCGAACCAGTGGCTGGCGGCGGTGCTCCTCAGCCTGTGCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS GCA 72 bp ACCGCCGCCAGCCACTGGTTCGAGCAACAAGCACCCTaGACCAACAGCATCATGTCCATCCCTGCTAGGGCT +
Preference number: 6 (lower is better)
Translates to: TAASHWFEQQAP*TNSIMSIPARA
Trigger: AGCCCTAGCAGGGATGGACATGATGCTGTTGGTGCAGGGTGCTTGTTGCTCGAACCAGTGGCTGGCGGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357731.10
CDS GCA 72 bp TCCTTTGTACCATTCAAAGGCTGGAGGCGGCACACCTaGACCTTCACATCTTATCAGGCCACTGCGTCCGGG +
Preference number: 6 (lower is better)
Translates to: SFVPFKGWRRHT*TFTSYQATASG
Trigger: CCCGGACGCAGTGGCCTGATAAGATGTGAAGGTGCAGGTGTGCCGCCTCCAGCCTTTGAATGGTACAAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS TCA 72 bp CTGCGTCCGGGGGTCACGGTGCCAGATTTAATTTCCTaGATAGTAGGAGCAAAGTTGACAACAACTTTTACT +
Preference number: 6 (lower is better)
Translates to: LRPGVTVPDLIS*IVGAKLTTTFT
Trigger: AGTAAAAGTTGTTGTCAACTTTGCTCCTACTATTCAGGAAATTAAATCTGGCACCGTGACCCCCGGACGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS CCA 72 bp GAGGAACTTGCACAGTTAGATGCACCTGCATTGTTCTaGGTGTATGTTGAGTCTGAACAGAACACGTGTATG +
Preference number: 6 (lower is better)
Translates to: EELAQLDAPALF*VYVESEQNTCM
Trigger: CATACACGTGTTCTGTTCAGACTCAACATACACCCAGAACAATGCAGGTGCATCTAACTGTGCAAGTTCCTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306821.3
ENST00000357731.10
ENST00000467479.1
CDS TCA 72 bp ATTGTAGAATGGCATTCTTCAGGTAGAATATGCTGGTaGAAGAGGACAGTGTCAACACAAGGTACCAGCAGG +
Preference number: 6 (lower is better)
Translates to: IVEWHSSGRICW*KRTVSTQGTSR
Trigger: CCTGCTGGTACCTTGTGTTGACACTGTCCTCTTTCACCAGCATATTCTACCTGAAGAATGCCATTCTACAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306821.3
ENST00000357731.10
CDS CCA 72 bp TCTGGGTGTATGTTGAGTCTGAACAGAACACGTGTATaGGCCATCATCTGTCACATCTACATTCTGTATCTG +
Preference number: 6 (lower is better)
Translates to: SGCMLSLNRTRV*AIICHIYILYL
Trigger: CAGATACAGAATGTAGATGTGACAGATGATGGCCCATACACGTGTTCTGTTCAGACTCAACATACACCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306821.3
ENST00000357731.10
ENST00000467479.1
CDS CAA 72 bp TCTGGTTTCCCAGTGGCCAAACAAGTAAGAGTGACGTaGGTTCCTTCATTGACGGTCATATCATTTGAGATG +
Preference number: 6 (lower is better)
Translates to: SGFPVAKQVRVT*VPSLTVISFEM
Trigger: CATCTCAAATGATATGACCGTCAATGAAGGAACCAACGTCACTCTTACTTGTTTGGCCACTGGGAAACCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306821.3
ENST00000357731.10
ENST00000467479.1
CDS CAA 90 bp CATCTACATTCTGTATCTGGAGGCTGTAGTCCCTTTTATTCAATGTaGAAATTGAAACTCGAGGATCCACTGACCACTTATCACCTCCCG +
Preference number: 6 (lower is better)
Translates to: HLHSVSGGCSPFYSM*KLKLEDPLTTYHLP
Trigger: CGGGAGGTGATAAGTGGTCAGTGGATCCTCGAGTTTCAATTTCAACATTGAATAAAAGGGACTACAGCCTCCAGATACAGAATGTAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306821.3
ENST00000357731.10
ENST00000467479.1
CDS CAA 90 bp ATGGAAGGCTCTGGTTTCCCAGTGGCCAAACAAGTAAGAGTGACGTaGGTTCCTTCATTGACGGTCATATCATTTGAGATGTCATATATC +
Preference number: 6 (lower is better)
Translates to: MEGSGFPVAKQVRVT*VPSLTVISFEMSYI
Trigger: GATATATGACATCTCAAATGATATGACCGTCAATGAAGGAACCAACGTCACTCTTACTTGTTTGGCCACTGGGAAACCAGAGCCTTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306821.3
ENST00000357731.10
ENST00000467479.1
CDS CAA 72 bp TCTGGAGGCTGTAGTCCCTTTTATTCAATGTTGAAATaGAAACTCGAGGATCCACTGACCACTTATCACCTC +
Preference number: 6 (lower is better)
Translates to: SGGCSPFYSMLK*KLEDPLTTYHL
Trigger: GAGGTGATAAGTGGTCAGTGGATCCTCGAGTTTCAATTTCAACATTGAATAAAAGGGACTACAGCCTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306821.3
ENST00000357731.10
ENST00000467479.1
CDS CAA 90 bp CATTCTGTATCTGGAGGCTGTAGTCCCTTTTATTCAATGTTGAAATaGAAACTCGAGGATCCACTGACCACTTATCACCTCCCGCAAAAA +
Preference number: 6 (lower is better)
Translates to: HSVSGGCSPFYSMLK*KLEDPLTTYHLPQK
Trigger: TTTTTGCGGGAGGTGATAAGTGGTCAGTGGATCCTCGAGTTTCAATTTCAACATTGAATAAAAGGGACTACAGCCTCCAGATACAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306821.3
ENST00000357731.10
ENST00000467479.1
CDS CAA 90 bp GGTTTCCCAGTGGCCAAACAAGTAAGAGTGACGTTGGTTCCTTCATaGACGGTCATATCATTTGAGATGTCATATATCTTAGGAGGAACT +
Preference number: 6 (lower is better)
Translates to: GFPVAKQVRVTLVPS*TVISFEMSYILGGT
Trigger: AGTTCCTCCTAAGATATATGACATCTCAAATGATATGACCGTCAATGAAGGAACCAACGTCACTCTTACTTGTTTGGCCACTGGGAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306821.3
ENST00000357731.10
ENST00000467479.1
CDS TCA 72 bp AGTGACGTTGGTTCCTTCATTGACGGTCATATCATTTaGGATGTCATATATCTTAGGAGGAACTTGCACAGT +
Preference number: 6 (lower is better)
Translates to: SDVGSFIDGHII*DVIYLRRNLHS
Trigger: ACTGTGCAAGTTCCTCCTAAGATATATGACATCTCAAATGATATGACCGTCAATGAAGGAACCAACGTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306821.3
ENST00000357731.10
ENST00000467479.1
CDS CAA 72 bp GTGGCCAAACAAGTAAGAGTGACGTTGGTTCCTTCATaGACGGTCATATCATTTGAGATGTCATATATCTTA +
Preference number: 6 (lower is better)
Translates to: VAKQVRVTLVPS*TVISFEMSYIL
Trigger: TAAGATATATGACATCTCAAATGATATGACCGTCAATGAAGGAACCAACGTCACTCTTACTTGTTTGGCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306821.3
ENST00000357731.10
ENST00000467479.1