Pregenerated sensors for NEFM (Homo sapiens)
Ensembl gene IDs: ENSG00000104722Ensembl transcript IDs: ENST00000221166.10, ENST00000433454.3, ENST00000437366.2, ENST00000518131.5, ENST00000521540.1, ENST00000523467.1
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCGTGGTTCACCATCTCCAGGGTGGCGCGCAGCTCGCGGATCTCCTaGTCGTACGCGTCGCCCAGCTGGGCGTGCGAGGCCTGCTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: SWFTISRVARSSRIS*SYASPSWACEACFC Trigger: GCAGAAGCAGGCCTCGCACGCCCAGCTGGGCGACGCGTACGACCAGGAGATCCGCGAGCTGCGCGCCACCCTGGAGATGGTGAACCACGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS GCA 90 bp | TCCTGGTCGTACGCGTCGCCCAGCTGGGCGTGCGAGGCCTGCTTCTaGCGCAGCGCCTGGATCTCCGCCTCAATCTCCTTATTCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SWSYASPSWACEACF*RSAWISASISLFCC Trigger: GCAGCAGAATAAGGAGATTGAGGCGGAGATCCAGGCGCTGCGGCAGAAGCAGGCCTCGCACGCCCAGCTGGGCGACGCGTACGACCAGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS GCA 90 bp | CGGATCTCCTGGTCGTACGCGTCGCCCAGCTGGGCGTGCGAGGCCTaGTTCTGCCGCAGCGCCTGGATCTCCGCCTCAATCTCCTTATTC | + |
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Preference number: 5 (lower is better) Translates to: RISWSYASPSWACEA*FCRSAWISASISLF Trigger: GAATAAGGAGATTGAGGCGGAGATCCAGGCGCTGCGGCAGAAGCAGGCCTCGCACGCCCAGCTGGGCGACGCGTACGACCAGGAGATCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS TCA 90 bp | AGCCGGTGGATGTCTTCCTCCAGGTGGTCCGAGTCCAGCTGCACCTaGGCCTTCTCGTGGTTCACCATCTCCAGGGTGGCGCGCAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: SRWMSSSRWSESSCT*AFSWFTISRVARSS Trigger: CGAGCTGCGCGCCACCCTGGAGATGGTGAACCACGAGAAGGCTCAGGTGCAGCTGGACTCGGACCACCTGGAGGAAGACATCCACCGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS TCA 90 bp | CCTCAGTGTCGTCGCGCAACCGCGCCTCCTCCTCAAAGCGCTCCTTaGGCCGGTGGATGTCTTCCTCCAGGTGGTCCGAGTCCAGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: PQCRRATAPPPQSAP*AGGCLPPGGPSPAA Trigger: TGCAGCTGGACTCGGACCACCTGGAGGAAGACATCCACCGGCTCAAGGAGCGCTTTGAGGAGGAGGCGCGGTTGCGCGACGACACTGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS TCA 90 bp | CCACCTCATCCTGCAGCGACTGCACCTTCTTGTCCAGCTCCACCTTaGCCAGCGACGCCTCCTCGATGTCTTTGCGCAGCGCGCGGATGG | + |
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Preference number: 5 (lower is better) Translates to: PPHPAATAPSCPAPP*PATPPRCLCAARGW Trigger: CCATCCGCGCGCTGCGCAAAGACATCGAGGAGGCGTCGCTGGTCAAGGTGGAGCTGGACAAGAAGGTGCAGTCGCTGCAGGATGAGGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS TCA 90 bp | GCGCCGTCGAGATGTCTGTCTTCAGGTAGTCTTTGCGCTCCACCGTaGTGTGCGATGCCTGGATCTGGGCCAGAAGGTCGGCCACCTCCT | + |
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Preference number: 5 (lower is better) Translates to: APSRCLSSGSLCAPP*CAMPGSGPEGRPPP Trigger: AGGAGGTGGCCGACCTTCTGGCCCAGATCCAGGCATCGCACATCACGGTGGAGCGCAAAGACTACCTGAAGACAGACATCTCGACGGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 ENST00000523467.1 |
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| CDS TCA 90 bp | GTAGCGGCATTTGAACCACTCTTCGGCCTGGTGCATATTCTGGTCTaGGTGGCTTTCGAGCTGGGAGCGGATTTCCTTCAGCGCCGTCGA | + |
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Preference number: 5 (lower is better) Translates to: VAAFEPLFGLVHILV*VAFELGADFLQRRR Trigger: TCGACGGCGCTGAAGGAAATCCGCTCCCAGCTCGAAAGCCACTCAGACCAGAATATGCACCAGGCCGAAGAGTGGTTCAAATGCCGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 ENST00000523467.1 |
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| CDS CCA 90 bp | CACTCTTCGGCCTGGTGCATATTCTGGTCTGAGTGGCTTTCGAGCTaGGAGCGGATTTCCTTCAGCGCCGTCGAGATGTCTGTCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: HSSAWCIFWSEWLSS*ERISFSAVEMSVFR Trigger: CCTGAAGACAGACATCTCGACGGCGCTGAAGGAAATCCGCTCCCAGCTCGAAAGCCACTCAGACCAGAATATGCACCAGGCCGAAGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 ENST00000523467.1 |
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| CDS CCA 90 bp | CGGCATTTGAACCACTCTTCGGCCTGGTGCATATTCTGGTCTGAGTaGCTTTCGAGCTGGGAGCGGATTTCCTTCAGCGCCGTCGAGATG | + |
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Preference number: 5 (lower is better) Translates to: RHLNHSSAWCIFWSE*LSSWERISFSAVEM Trigger: CATCTCGACGGCGCTGAAGGAAATCCGCTCCCAGCTCGAAAGCCACTCAGACCAGAATATGCACCAGGCCGAAGAGTGGTTCAAATGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 ENST00000523467.1 |
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| CDS GCA 90 bp | TCGGCTTCCTCTCCTTCAGCTTCAGCTTCTGTTTCTCCTTCTTCCTaGTCACCTTCCTCTTTTTCACTAGAGCCTTCCTTCTCGGATCCT | + |
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Preference number: 5 (lower is better) Translates to: SASSPSASASVSPSS*SPSSFSLEPSFSDP Trigger: AGGATCCGAGAAGGAAGGCTCTAGTGAAAAAGAGGAAGGTGAGCAGGAAGAAGGAGAAACAGAAGCTGAAGCTGAAGGAGAGGAAGCCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 ENST00000518131.5 |
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| CDS CCA 90 bp | GGGAGCTTCCACCTTGGGTTTCTGAATCTTACTGGATATTGTGATTaGGGGTCGGTGTGTATACAGTGGCCCAGTGATGCTTCCTGCAAA | + |
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Preference number: 5 (lower is better) Translates to: GSFHLGFLNLTGYCD*GSVCIQWPSDASCK Trigger: TTTGCAGGAAGCATCACTGGGCCACTGTATACACACCGACCCCCAATCACAATATCCAGTAAGATTCAGAAACCCAAGGTGGAAGCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS GCA 90 bp | TGTGATTGGGGGTCGGTGTGTATACAGTGGCCCAGTGATGCTTCCTaGAAATGTGCTAAATCTAGTCTCTTCACCCTCCAGGAGTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: CDWGSVCIQWPSDAS*KCAKSSLFTLQEFS Trigger: AGAAAACTCCTGGAGGGTGAAGAGACTAGATTTAGCACATTTGCAGGAAGCATCACTGGGCCACTGTATACACACCGACCCCCAATCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS CCA 90 bp | CTCCTTTACAGGGGACTCAGCTTTCTTCTTCTCTGGCACATCCTTTaGTTTCTCTTCCTTTTTCTCTACCTTCTCTTCCTTGGGAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: LLYRGLSFLLLWHIL*FLFLFLYLLFLGSF Trigger: GAAGCTCCCAAGGAAGAGAAGGTAGAGAAAAAGGAAGAGAAACCAAAGGATGTGCCAGAGAAGAAGAAAGCTGAGTCCCCTGTAAAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 |
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| CDS GCA 90 bp | AGCTACTTCTTCTTCTTCAGCTTCGGGTTCCTCTTCCTTTTCTTCTaGTGCTTCTTTCTTCTCTTCCTTCATGGAAACGGCCAATTCCTC | + |
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Preference number: 5 (lower is better) Translates to: SYFFFFSFGFLFLFF*CFFLLFLHGNGQFL Trigger: GAGGAATTGGCCGTTTCCATGAAGGAAGAGAAGAAAGAAGCAGCAGAAGAAAAGGAAGAGGAACCCGAAGCTGAAGAAGAAGAAGTAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS CCA 90 bp | CTGAATCTTACTGGATATTGTGATTGGGGGTCGGTGTGTATACAGTaGCCCAGTGATGCTTCCTGCAAATGTGCTAAATCTAGTCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LNLTGYCDWGSVCIQ*PSDASCKCAKSSLF Trigger: GAAGAGACTAGATTTAGCACATTTGCAGGAAGCATCACTGGGCCACTGTATACACACCGACCCCCAATCACAATATCCAGTAAGATTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS TCA 90 bp | AATTTGTGTTGGACCTTAAGCTTGGGAGCTTCCACCTTGGGTTTCTaGATCTTACTGGATATTGTGATTGGGGGTCGGTGTGTATACAGT | + |
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Preference number: 5 (lower is better) Translates to: NLCWTLSLGASTLGF*ILLDIVIGGRCVYS Trigger: ACTGTATACACACCGACCCCCAATCACAATATCCAGTAAGATTCAGAAACCCAAGGTGGAAGCTCCCAAGCTTAAGGTCCAACACAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS GCA 90 bp | TACTTCTTCTTCTTCAGCTTCGGGTTCCTCTTCCTTTTCTTCTGCTaGTTCTTTCTTCTCTTCCTTCATGGAAACGGCCAATTCCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: YFFFFSFGFLFLFFC*FFLLFLHGNGQFLC Trigger: ACAGAGGAATTGGCCGTTTCCATGAAGGAAGAGAAGAAAGAAGCAGCAGAAGAAAAGGAAGAGGAACCCGAAGCTGAAGAAGAAGAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS GCA 90 bp | AGCTCTTCCGATCACTGCCGGAAAAGTAGAGAATACACGCGTTTCTaGATAAGCTATCCTAAAGTTGCTGATTTATCCACTACCGAATTC | + |
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Preference number: 5 (lower is better) Translates to: SSSDHCRKSREYTRF*ISYPKVADLSTTEF Trigger: GAATTCGGTAGTGGATAAATCAGCAACTTTAGGATAGCTTATGCAGAAACGCGTGTATTCTCTACTTTTCCGGCAGTGATCGGAAGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433454.3 |
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| CDS GCA 72 bp | GAGGACACGGTGCTGGGCGAGCCGCGGGACCACGACTaGGAGCGGAAGCCACTGGACGGGGAGCCGCTGACG | + |
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Preference number: 6 (lower is better) Translates to: EDTVLGEPRDHD*ERKPLDGEPLT Trigger: CGTCAGCGGCTCCCCGTCCAGTGGCTTCCGCTCGCAGTCGTGGTCCCGCGGCTCGCCCAGCACCGTGTCCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS CCA 72 bp | GCGACGCCTCCTCGATGTCTTTGCGCAGCGCGCGGATaGCCGCCTCAGTGTCGTCGCGCAACCGCGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: ATPPRCLCAARG*PPQCRRATAPP Trigger: AGGAGGCGCGGTTGCGCGACGACACTGAGGCGGCCATCCGCGCGCTGCGCAAAGACATCGAGGAGGCGTCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS GCA 72 bp | GGGCGAGCATGCTGCGCTTATAGGAGGAGGACACGGTaGTGGGCGAGCCGCGGGACCACGACTGCGAGCGGA | + |
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Preference number: 6 (lower is better) Translates to: GRACCAYRRRTR*WASRGTTTASG Trigger: TCCGCTCGCAGTCGTGGTCCCGCGGCTCGCCCAGCACCGTGTCCTCCTCCTATAAGCGCAGCATGCTCGCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS GCA 72 bp | TGGTCGTACGCGTCGCCCAGCTGGGCGTGCGAGGCCTaGTTCTGCCGCAGCGCCTGGATCTCCGCCTCAATC | + |
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Preference number: 6 (lower is better) Translates to: WSYASPSWACEA*FCRSAWISASI Trigger: GATTGAGGCGGAGATCCAGGCGCTGCGGCAGAAGCAGGCCTCGCACGCCCAGCTGGGCGACGCGTACGACCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS GCA 72 bp | TGGCCGAGCTGTAAGCGAGGCGCGGGGCGAGCATGCTaGGCTTATAGGAGGAGGACACGGTGCTGGGCGAGC | + |
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Preference number: 6 (lower is better) Translates to: WPSCKRGAGRAC*AYRRRTRCWAS Trigger: GCTCGCCCAGCACCGTGTCCTCCTCCTATAAGCGCAGCATGCTCGCCCCGCGCCTCGCTTACAGCTCGGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS GCA 72 bp | GCATGGCCGAGCTGTAAGCGAGGCGCGGGGCGAGCATaGTGCGCTTATAGGAGGAGGACACGGTGCTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: AWPSCKRGAGRA*CAYRRRTRCWA Trigger: CGCCCAGCACCGTGTCCTCCTCCTATAAGCGCAGCATGCTCGCCCCGCGCCTCGCTTACAGCTCGGCCATGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS GCA 72 bp | TACGCGTCGCCCAGCTGGGCGTGCGAGGCCTGCTTCTaGCGCAGCGCCTGGATCTCCGCCTCAATCTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: YASPSWACEACF*RSAWISASISL Trigger: TAAGGAGATTGAGGCGGAGATCCAGGCGCTGCGGCAGAAGCAGGCCTCGCACGCCCAGCTGGGCGACGCGTA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS CAA 72 bp | AGCTCCACCTTGACCAGCGACGCCTCCTCGATGTCTTaGCGCAGCGCGCGGATGGCCGCCTCAGTGTCGTCG | + |
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Preference number: 6 (lower is better) Translates to: SSTLTSDASSMS*RSARMAASVSS Trigger: CGACGACACTGAGGCGGCCATCCGCGCGCTGCGCAAAGACATCGAGGAGGCGTCGCTGGTCAAGGTGGAGCT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS CAA 90 bp | GCCTCAGTGTCGTCGCGCAACCGCGCCTCCTCCTCAAAGCGCTCCTaGAGCCGGTGGATGTCTTCCTCCAGGTGGTCCGAGTCCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: ASVSSRNRASSSKRS*SRWMSSSRWSESSC Trigger: GCAGCTGGACTCGGACCACCTGGAGGAAGACATCCACCGGCTCAAGGAGCGCTTTGAGGAGGAGGCGCGGTTGCGCGACGACACTGAGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS CAA 90 bp | TTCTTGTCCAGCTCCACCTTGACCAGCGACGCCTCCTCGATGTCTTaGCGCAGCGCGCGGATGGCCGCCTCAGTGTCGTCGCGCAACCGC | + |
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Preference number: 6 (lower is better) Translates to: FLSSSTLTSDASSMS*RSARMAASVSSRNR Trigger: GCGGTTGCGCGACGACACTGAGGCGGCCATCCGCGCGCTGCGCAAAGACATCGAGGAGGCGTCGCTGGTCAAGGTGGAGCTGGACAAGAA 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS GCA 72 bp | AGCGGGTCTCGGTTACCCGCCGGTAGGCGGACGGGTTaGCCAGCGAGTCCAACGTGTAGCTCATCTTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SGSRLPAGRRTG*PASPTCSSSWR Trigger: CCTCCAAGATGAGCTACACGTTGGACTCGCTGGGCAACCCGTCCGCCTACCGGCGGGTAACCGAGACCCGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS CAA 72 bp | TCGTCGCGCAACCGCGCCTCCTCCTCAAAGCGCTCCTaGAGCCGGTGGATGTCTTCCTCCAGGTGGTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: SSRNRASSSKRS*SRWMSSSRWSE Trigger: CTCGGACCACCTGGAGGAAGACATCCACCGGCTCAAGGAGCGCTTTGAGGAGGAGGCGCGGTTGCGCGACGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS CAA 90 bp | TTGTGGCGCTCCTCGATGTCGCTGAGCTGCCGCTCCAGGGACTCCTaGGTGCCGCGCACCGACTCTAGCTCGATGCTCTTGGACTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LWRSSMSLSCRSRDS*VPRTDSSSMLLDCS Trigger: GCTGCAGTCCAAGAGCATCGAGCTAGAGTCGGTGCGCGGCACCAAGGAGTCCCTGGAGCGGCAGCTCAGCGACATCGAGGAGCGCCACAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 ENST00000523467.1 |
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| CDS CCA 72 bp | AACCGCGCCTCCTCCTCAAAGCGCTCCTTGAGCCGGTaGATGTCTTCCTCCAGGTGGTCCGAGTCCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: NRASSSKRSLSR*MSSSRWSESSC Trigger: GCAGCTGGACTCGGACCACCTGGAGGAAGACATCCACCGGCTCAAGGAGCGCTTTGAGGAGGAGGCGCGGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS CAA 72 bp | TCCTCGATGTCGCTGAGCTGCCGCTCCAGGGACTCCTaGGTGCCGCGCACCGACTCTAGCTCGATGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SSMSLSCRSRDS*VPRTDSSSMLL Trigger: CAAGAGCATCGAGCTAGAGTCGGTGCGCGGCACCAAGGAGTCCCTGGAGCGGCAGCTCAGCGACATCGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 ENST00000523467.1 |
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| CDS TCA 72 bp | CCTGCAGCGACTGCACCTTCTTGTCCAGCTCCACCTTaGCCAGCGACGCCTCCTCGATGTCTTTGCGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: PAATAPSCPAPP*PATPPRCLCAA Trigger: CGCTGCGCAAAGACATCGAGGAGGCGTCGCTGGTCAAGGTGGAGCTGGACAAGAAGGTGCAGTCGCTGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS CAA 72 bp | AGGAAGGCCACCTCATCCTGCAGCGACTGCACCTTCTaGTCCAGCTCCACCTTGACCAGCGACGCCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: RKATSSCSDCTF*SSSTLTSDASS Trigger: CGAGGAGGCGTCGCTGGTCAAGGTGGAGCTGGACAAGAAGGTGCAGTCGCTGCAGGATGAGGTGGCCTTCCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS TCA 72 bp | ATGTCTTCCTCCAGGTGGTCCGAGTCCAGCTGCACCTaGGCCTTCTCGTGGTTCACCATCTCCAGGGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: MSSSRWSESSCT*AFSWFTISRVA Trigger: CGCCACCCTGGAGATGGTGAACCACGAGAAGGCTCAGGTGCAGCTGGACTCGGACCACCTGGAGGAAGACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS GCA 72 bp | TTGCTCCGCAGGAAGGCCACCTCATCCTGCAGCGACTaGACCTTCTTGTCCAGCTCCACCTTGACCAGCGAC | + |
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Preference number: 6 (lower is better) Translates to: LLRRKATSSCSD*TFLSSSTLTSD Trigger: GTCGCTGGTCAAGGTGGAGCTGGACAAGAAGGTGCAGTCGCTGCAGGATGAGGTGGCCTTCCTGCGGAGCAA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 ENST00000523467.1 |
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| CDS CAA 72 bp | AGGAAGGCCACCTCATCCTGCAGCGACTGCACCTTCTaGTCCAGCTCCACCTTGACCAGCGACGCCTCGTGT | + |
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Preference number: 6 (lower is better) Translates to: RKATSSCSDCTF*SSSTLTSDASC Trigger: ACACGAGGCGTCGCTGGTCAAGGTGGAGCTGGACAAGAAGGTGCAGTCGCTGCAGGATGAGGTGGCCTTCCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523467.1 |
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| CDS CAA 90 bp | TTGCTCCGCAGGAAGGCCACCTCATCCTGCAGCGACTGCACCTTCTaGTCCAGCTCCACCTTGACCAGCGACGCCTCCTCGATGTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LLRRKATSSCSDCTF*SSSTLTSDASSMSL Trigger: CAAAGACATCGAGGAGGCGTCGCTGGTCAAGGTGGAGCTGGACAAGAAGGTGCAGTCGCTGCAGGATGAGGTGGCCTTCCTGCGGAGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS CAA 90 bp | TTGCTCCGCAGGAAGGCCACCTCATCCTGCAGCGACTGCACCTTCTaGTCCAGCTCCACCTTGACCAGCGACGCCTCGTGTAGCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: LLRRKATSSCSDCTF*SSSTLTSDASCSSS Trigger: AGATGAGCTACACGAGGCGTCGCTGGTCAAGGTGGAGCTGGACAAGAAGGTGCAGTCGCTGCAGGATGAGGTGGCCTTCCTGCGGAGCAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523467.1 |
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| CDS TCA 72 bp | AGATGTCTGTCTTCAGGTAGTCTTTGCGCTCCACCGTaGTGTGCGATGCCTGGATCTGGGCCAGAAGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: RCLSSGSLCAPP*CAMPGSGPEGR Trigger: CCGACCTTCTGGCCCAGATCCAGGCATCGCACATCACGGTGGAGCGCAAAGACTACCTGAAGACAGACATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 ENST00000523467.1 |
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| CDS CCA 72 bp | GCCTGGTGCATATTCTGGTCTGAGTGGCTTTCGAGCTaGGAGCGGATTTCCTTCAGCGCCGTCGAGATGTCT | + |
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Preference number: 6 (lower is better) Translates to: AWCIFWSEWLSS*ERISFSAVEMS Trigger: AGACATCTCGACGGCGCTGAAGGAAATCCGCTCCCAGCTCGAAAGCCACTCAGACCAGAATATGCACCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 ENST00000523467.1 |
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| CDS CCA 72 bp | AACCACTCTTCGGCCTGGTGCATATTCTGGTCTGAGTaGCTTTCGAGCTGGGAGCGGATTTCCTTCAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: NHSSAWCIFWSE*LSSWERISFSA Trigger: GGCGCTGAAGGAAATCCGCTCCCAGCTCGAAAGCCACTCAGACCAGAATATGCACCAGGCCGAAGAGTGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 ENST00000523467.1 |
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| CDS TCA 72 bp | TTTGAACCACTCTTCGGCCTGGTGCATATTCTGGTCTaGGTGGCTTTCGAGCTGGGAGCGGATTTCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: FEPLFGLVHILV*VAFELGADFLQ Trigger: CTGAAGGAAATCCGCTCCCAGCTCGAAAGCCACTCAGACCAGAATATGCACCAGGCCGAAGAGTGGTTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 ENST00000523467.1 |
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| CDS CAA 90 bp | GTGTCCTGGCCATTCCCATCTGAGCCCTTTGGGCTGAAGCCAATTTaGAGAGCTCTTCCGATCACTGCCGGAAAAGTAGAGAATACACGC | + |
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Preference number: 6 (lower is better) Translates to: VSWPFPSEPFGLKPI*RALPITAGKVENTR Trigger: GCGTGTATTCTCTACTTTTCCGGCAGTGATCGGAAGAGCTCTCAAAATTGGCTTCAGCCCAAAGGGCTCAGATGGGAATGGCCAGGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433454.3 |
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| CDS GCA 72 bp | GGGTCGGTGTGTATACAGTGGCCCAGTGATGCTTCCTaGAAATGTGCTAAATCTAGTCTCTTCACCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GSVCIQWPSDAS*KCAKSSLFTLQ Trigger: CTGGAGGGTGAAGAGACTAGATTTAGCACATTTGCAGGAAGCATCACTGGGCCACTGTATACACACCGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS TCA 72 bp | TGGACCTTAAGCTTGGGAGCTTCCACCTTGGGTTTCTaGATCTTACTGGATATTGTGATTGGGGGTCGGTGT | + |
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Preference number: 6 (lower is better) Translates to: WTLSLGASTLGF*ILLDIVIGGRC Trigger: ACACCGACCCCCAATCACAATATCCAGTAAGATTCAGAAACCCAAGGTGGAAGCTCCCAAGCTTAAGGTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS CCA 72 bp | CACCTTGGGTTTCTGAATCTTACTGGATATTGTGATTaGGGGTCGGTGTGTATACAGTGGCCCAGTGATGCT | + |
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Preference number: 6 (lower is better) Translates to: HLGFLNLTGYCD*GSVCIQWPSDA Trigger: AGCATCACTGGGCCACTGTATACACACCGACCCCCAATCACAATATCCAGTAAGATTCAGAAACCCAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS CAA 90 bp | CCTCCTTTACAGGGGACTCAGCTTTCTTCTTCTCTGGCACATCCTTaGGTTTCTCTTCCTTTTTCTCTACCTTCTCTTCCTTGGGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: PPLQGTQLSSSLAHP*VSLPFSLPSLPWEL Trigger: AAGCTCCCAAGGAAGAGAAGGTAGAGAAAAAGGAAGAGAAACCAAAGGATGTGCCAGAGAAGAAGAAAGCTGAGTCCCCTGTAAAGGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 |
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| CDS CCA 72 bp | ACTGGATATTGTGATTGGGGGTCGGTGTGTATACAGTaGCCCAGTGATGCTTCCTGCAAATGTGCTAAATCT | + |
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Preference number: 6 (lower is better) Translates to: TGYCDWGSVCIQ*PSDASCKCAKS Trigger: AGATTTAGCACATTTGCAGGAAGCATCACTGGGCCACTGTATACACACCGACCCCCAATCACAATATCCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS GCA 72 bp | TTCTTCAGCTTCGGGTTCCTCTTCCTTTTCTTCTGCTaGTTCTTTCTTCTCTTCCTTCATGGAAACGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: FFSFGFLFLFFC*FFLLFLHGNGQ Trigger: TTGGCCGTTTCCATGAAGGAAGAGAAGAAAGAAGCAGCAGAAGAAAAGGAAGAGGAACCCGAAGCTGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS GCA 72 bp | TTCTTCTTCAGCTTCGGGTTCCTCTTCCTTTTCTTCTaGTGCTTCTTTCTTCTCTTCCTTCATGGAAACGGC | + |
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Preference number: 6 (lower is better) Translates to: FFFSFGFLFLFF*CFFLLFLHGNG Trigger: GCCGTTTCCATGAAGGAAGAGAAGAAAGAAGCAGCAGAAGAAAAGGAAGAGGAACCCGAAGCTGAAGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS CCA 72 bp | TTGGTTTCCTCTATGATCTCCTCGACAAATTTGTGTTaGACCTTAAGCTTGGGAGCTTCCACCTTGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LVSSMISSTNLC*TLSLGASTLGF Trigger: GAAACCCAAGGTGGAAGCTCCCAAGCTTAAGGTCCAACACAAATTTGTCGAGGAGATCATAGAGGAAACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS CAA 72 bp | TCCACTTTGGTTTCCTCTATGATCTCCTCGACAAATTaGTGTTGGACCTTAAGCTTGGGAGCTTCCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: STLVSSMISSTN*CWTLSLGASTL Trigger: CAAGGTGGAAGCTCCCAAGCTTAAGGTCCAACACAAATTTGTCGAGGAGATCATAGAGGAAACCAAAGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS CAA 90 bp | ATCCTCCACTTTGGTTTCCTCTATGATCTCCTCGACAAATTTGTGTaGGACCTTAAGCTTGGGAGCTTCCACCTTGGGTTTCTGAATCTT | + |
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Preference number: 6 (lower is better) Translates to: ILHFGFLYDLLDKFV*DLKLGSFHLGFLNL Trigger: AAGATTCAGAAACCCAAGGTGGAAGCTCCCAAGCTTAAGGTCCAACACAAATTTGTCGAGGAGATCATAGAGGAAACCAAAGTGGAGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS CAA 72 bp | TTTGGTTTCCTCTATGATCTCCTCGACAAATTTGTGTaGGACCTTAAGCTTGGGAGCTTCCACCTTGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: FGFLYDLLDKFV*DLKLGSFHLGF Trigger: AAACCCAAGGTGGAAGCTCCCAAGCTTAAGGTCCAACACAAATTTGTCGAGGAGATCATAGAGGAAACCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000221166.10 ENST00000433454.3 ENST00000437366.2 ENST00000518131.5 ENST00000521540.1 |
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| CDS GCA 72 bp | GATCACTGCCGGAAAAGTAGAGAATACACGCGTTTCTaGATAAGCTATCCTAAAGTTGCTGATTTATCCACT | + |
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Preference number: 6 (lower is better) Translates to: DHCRKSREYTRF*ISYPKVADLST Trigger: AGTGGATAAATCAGCAACTTTAGGATAGCTTATGCAGAAACGCGTGTATTCTCTACTTTTCCGGCAGTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433454.3 |
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