RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NEDD9 (Homo sapiens)

Ensembl gene IDs: ENSG00000111859

Ensembl transcript IDs: ENST00000379433.5, ENST00000379446.10, ENST00000397378.7, ENST00000448183.6, ENST00000459670.2, ENST00000461055.2, ENST00000468612.5, ENST00000504387.5, ENST00000504634.5, ENST00000505589.1, ENST00000508546.5, ENST00000508800.1, ENST00000512665.5, ENST00000513989.5, ENST00000514660.1, ENST00000620854.4

Found 1179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGGGCCCCCAGGCTCTGCACCAACTCCCTCCCTCGGCGAGAACTaGGCTGTCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGT +
Preference number: 1 (lower is better)
Translates to: AGPPGSAPTPSLGEN*AVHFHRCPARPYLC
Trigger: ACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGACAGCTCAGTTCTCGCCGAGGGAGGGAGTTGGTGCAGAGCCTGGGGGCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR TCA 90 bp GCAGCTGTCCCTGGGAGCCACCGTGTGGGTACTCCGTTGAGTTCATaGTGCTCTCCGGCCCATTCTTCAGATGCAAGCTGCCAGGGCCGG +
Preference number: 1 (lower is better)
Translates to: AAVPGSHRVGTPLSS*CSPAHSSDASCQGR
Trigger: CCGGCCCTGGCAGCTTGCATCTGAAGAATGGGCCGGAGAGCATCATGAACTCAACGGAGTACCCACACGGTGGCTCCCAGGGACAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 90 bp TCCTCTCAGAACCATCACTGCTGCTACAGTCAGGGGCCTGCTCCTTaGTCAGGCCTGGGGGCAGTGCCTTGTTGTGGGCCTGGGCCTTGT +
Preference number: 1 (lower is better)
Translates to: SSQNHHCCYSQGPAP*SGLGAVPCCGPGPC
Trigger: ACAAGGCCCAGGCCCACAACAAGGCACTGCCCCCAGGCCTGAGCAAGGAGCAGGCCCCTGACTGTAGCAGCAGTGATGGTTCTGAGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 90 bp ATCCAGCTCCTCTCAGAACCATCACTGCTGCTACAGTCAGGGGCCTaGTCCTTGCTCAGGCCTGGGGGCAGTGCCTTGTTGTGGGCCTGG +
Preference number: 1 (lower is better)
Translates to: IQLLSEPSLLLQSGA*SLLRPGGSALLWAW
Trigger: CCAGGCCCACAACAAGGCACTGCCCCCAGGCCTGAGCAAGGAGCAGGCCCCTGACTGTAGCAGCAGTGATGGTTCTGAGAGGAGCTGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 90 bp CTGCAGGGCCGTGGTGCTGGGGTAATGGAGGGCGGCCATCTTGGTTaGCATGACTATGGTCTTGAGCTGCTCGCAGAGCTGGTTGCTGGA +
Preference number: 1 (lower is better)
Translates to: LQGRGAGVMEGGHLG*HDYGLELLAELVAG
Trigger: TCCAGCAACCAGCTCTGCGAGCAGCTCAAGACCATAGTCATGGCAACCAAGATGGCCGCCCTCCATTACCCCAGCACCACGGCCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 90 bp GGGTACTCCGTTGAGTTCATGATGCTCTCCGGCCCATTCTTCAGATaGAAGCTGCCAGGGCCGGGTCTGAAGAGGGCCTCTGCGTTGGTG +
Preference number: 1 (lower is better)
Translates to: GYSVEFMMLSGPFFR*KLPGPGLKRASALV
Trigger: CACCAACGCAGAGGCCCTCTTCAGACCCGGCCCTGGCAGCTTGCATCTGAAGAATGGGCCGGAGAGCATCATGAACTCAACGGAGTACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 90 bp GGCCCACTGGTTCCCCCAATGCTTCTCTGCACTGATGGTGGCACCTaGTATACCTCTTGTTCTTGGGTGCCGTGGCCAGTGGGGACTTGG +
Preference number: 1 (lower is better)
Translates to: GPLVPPMLLCTDGGT*YTSCSWVPWPVGTW
Trigger: CCAAGTCCCCACTGGCCACGGCACCCAAGAACAAGAGGTATATCAGGTGCCACCATCAGTGCAGAGAAGCATTGGGGGAACCAGTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 90 bp AGGATGCAGCAGCTGTCCCTGGGAGCCACCGTGTGGGTACTCCGTTaGGTTCATGATGCTCTCCGGCCCATTCTTCAGATGCAAGCTGCC +
Preference number: 1 (lower is better)
Translates to: RMQQLSLGATVWVLR*VHDALRPILQMQAA
Trigger: GGCAGCTTGCATCTGAAGAATGGGCCGGAGAGCATCATGAACTCAACGGAGTACCCACACGGTGGCTCCCAGGGACAGCTGCTGCATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 90 bp TGGAGGCAGTCTCCTGCATGGGACCAATCAGAAGCTTCACCCGGTTaGCTGGGACAATGCCTTGCCGACCGTGTAATGAGCACAGCCACC +
Preference number: 1 (lower is better)
Translates to: WRQSPAWDQSEASPG*LGQCLADRVMSTAT
Trigger: GGTGGCTGTGCTCATTACACGGTCGGCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTCTGATTGGTCCCATGCAGGAGACTGCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 90 bp TCAGTCCAGAGGCAGGCTGCTCGTGACTGGAGGCAGTCTCCTGCATaGGACCAATCAGAAGCTTCACCCGGTTGCCTGGGACAATGCCTT +
Preference number: 1 (lower is better)
Translates to: SVQRQAARDWRQSPA*DQSEASPGCLGQCL
Trigger: AAGGCATTGTCCCAGGCAACCGGGTGAAGCTTCTGATTGGTCCCATGCAGGAGACTGCCTCCAGTCACGAGCAGCCTGCCTCTGGACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 90 bp ATGAGCACAGCCACCATCCTTCCAGTCCCCCTGTGTTCTGCTCTATaGCGGTCAGGATGTCTCCCTTGCGAAAGGCCAGTTCCTCGGCAC +
Preference number: 1 (lower is better)
Translates to: MSTATILPVPLCSAL*RSGCLPCERPVPRH
Trigger: GTGCCGAGGAACTGGCCTTTCGCAAGGGAGACATCCTGACCGTCATAGAGCAGAACACAGGGGGACTGGAAGGATGGTGGCTGTGCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 90 bp TGTTGGCCAAAGGTCTGCTGCATCAGTCCAGAGGCAGGCTGCTCGTaGCTGGAGGCAGTCTCCTGCATGGGACCAATCAGAAGCTTCACC +
Preference number: 1 (lower is better)
Translates to: CWPKVCCISPEAGCS*LEAVSCMGPIRSFT
Trigger: GGTGAAGCTTCTGATTGGTCCCATGCAGGAGACTGCCTCCAGTCACGAGCAGCCTGCCTCTGGACTGATGCAGCAGACCTTTGGCCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 90 bp TTTACCCACGTGGGGCCCACTGGTTCCCCCAATGCTTCTCTGCACTaGTGGTGGCACCTGATATACCTCTTGTTCTTGGGTGCCGTGGCC +
Preference number: 1 (lower is better)
Translates to: FTHVGPTGSPNASLH*WWHLIYLLFLGAVA
Trigger: GGCCACGGCACCCAAGAACAAGAGGTATATCAGGTGCCACCATCAGTGCAGAGAAGCATTGGGGGAACCAGTGGGCCCCACGTGGGTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 90 bp TCCCTCCCTCGGCGAGAACTGAGCTGTCCATTTCCACAGATGCCCTaGACGCCCATACCTCTGTGCCTTCATCCATGCCATGTCCTTGTC +
Preference number: 1 (lower is better)
Translates to: SLPRRELSCPFPQMP*TPIPLCLHPCHVLV
Trigger: GACAAGGACATGGCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGACAGCTCAGTTCTCGCCGAGGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR GCA 90 bp ATGGGACCAATCAGAAGCTTCACCCGGTTGCCTGGGACAATGCCTTaGCGACCGTGTAATGAGCACAGCCACCATCCTTCCAGTCCCCCT +
Preference number: 1 (lower is better)
Translates to: MGPIRSFTRLPGTMP*RPCNEHSHHPSSPP
Trigger: AGGGGGACTGGAAGGATGGTGGCTGTGCTCATTACACGGTCGGCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTCTGATTGGTCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 90 bp CCTGCATGGGACCAATCAGAAGCTTCACCCGGTTGCCTGGGACAATaGCTTGCCGACCGTGTAATGAGCACAGCCACCATCCTTCCAGTC +
Preference number: 1 (lower is better)
Translates to: PAWDQSEASPGCLGQ*LADRVMSTATILPV
Trigger: GACTGGAAGGATGGTGGCTGTGCTCATTACACGGTCGGCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTCTGATTGGTCCCATGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 90 bp CCGTGTAATGAGCACAGCCACCATCCTTCCAGTCCCCCTGTGTTCTaGTCTATGACGGTCAGGATGTCTCCCTTGCGAAAGGCCAGTTCC +
Preference number: 1 (lower is better)
Translates to: PCNEHSHHPSSPPVF*SMTVRMSPLRKASS
Trigger: GGAACTGGCCTTTCGCAAGGGAGACATCCTGACCGTCATAGAGCAGAACACAGGGGGACTGGAAGGATGGTGGCTGTGCTCATTACACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 90 bp GTTGATGGTTGTGGTGAGCTGCTTGGCGTCATCGGGCACCGTCTTTaGCACCATCACAAACCGGTCCAGATCGTCACACTTGTTCTGGGG +
Preference number: 1 (lower is better)
Translates to: VDGCGELLGVIGHRL*HHHKPVQIVTLVLG
Trigger: CCCCAGAACAAGTGTGACGATCTGGACCGGTTTGTGATGGTGGCAAAGACGGTGCCCGATGACGCCAAGCAGCTCACCACAACCATCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 90 bp GCCATTAGGCTGGAGACACCCATCTCAAGGGCCTGCTGGAGCCGCTaGAGTCTCTCAATAGCTGTGTCTGGATCCAGGAAGAGCCTTTTG +
Preference number: 1 (lower is better)
Translates to: AIRLETPISRACWSR*SLSIAVSGSRKSLL
Trigger: CAAAAGGCTCTTCCTGGATCCAGACACAGCTATTGAGAGACTTCAGCGGCTCCAGCAGGCCCTTGAGATGGGTGTCTCCAGCCTAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 90 bp AGGTGGCACTTGGTAGATGGTGTCTCGGGGAGCAGCCTGTGGGTTTaGCACTTGATAGAGCTTCTGTTGGCCAAAGGTCTGCTGCATCAG +
Preference number: 1 (lower is better)
Translates to: RWHLVDGVSGSSLWV*HLIELLLAKGLLHQ
Trigger: CTGATGCAGCAGACCTTTGGCCAACAGAAGCTCTATCAAGTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAGTGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 90 bp GTAGGAAGGTGGCACTTGGTAGATGGTGTCTCGGGGAGCAGCCTGTaGGTTTGGCACTTGATAGAGCTTCTGTTGGCCAAAGGTCTGCTG +
Preference number: 1 (lower is better)
Translates to: VGRWHLVDGVSGSSL*VWHLIELLLAKGLL
Trigger: CAGCAGACCTTTGGCCAACAGAAGCTCTATCAAGTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAGTGCCACCTTCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 90 bp AGTTCCGGGAGGCAGGCAGCATTTGCAACAGCTCCCTTGACAAAGTaGAGGTACTCCTTCAGGAACAGCTCCACCTTGTCCACTGCTGTG +
Preference number: 1 (lower is better)
Translates to: SSGRQAAFATAPLTK*RYSFRNSSTLSTAV
Trigger: CACAGCAGTGGACAAGGTGGAGCTGTTCCTGAAGGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGCCTCCCGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 90 bp AGCACAGCAACTGCCGATCCTGAGCACTCACGCCACTGTTTGTGGTaGGTAGGCTCTGAGAGGGCTTCCACTTCGAGATGTCATTCTCCA +
Preference number: 1 (lower is better)
Translates to: STATADPEHSRHCLW*VGSERASTSRCHSP
Trigger: TGGAGAATGACATCTCGAAGTGGAAGCCCTCTCAGAGCCTACCCACCACAAACAGTGGCGTGAGTGCTCAGGATCGGCAGTTGCTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 90 bp GTAGCCATGGCCTGTCCTCACGGGGGTTATCACCCTTGCACAGGCTaGAGACATCAGGGTTGCCAGAACAGCTCAAAGCATGGAATCAGA +
Preference number: 1 (lower is better)
Translates to: VAMACPHGGYHPCTG*RHQGCQNSSKHGIR
Trigger: TCTGATTCCATGCTTTGAGCTGTTCTGGCAACCCTGATGTCTTCAGCCTGTGCAAGGGTGATAACCCCCGTGAGGACAGGCCATGGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 90 bp GTTGTATTTTACATGAAGGTCCTTCCCTGCTGGCTTGGTGCAGGTTaGAGGAATGTCATAAACCCCCTCCGGTCTGAGGTCCGGCCTTCC +
Preference number: 1 (lower is better)
Translates to: VVFYMKVLPCWLGAG*RNVINPLRSEVRPS
Trigger: GGAAGGCCGGACCTCAGACCGGAGGGGGTTTATGACATTCCTCCAACCTGCACCAAGCCAGCAGGGAAGGACCTTCATGTAAAATACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 90 bp AGAAGCACAGCAACTGCCGATCCTGAGCACTCACGCCACTGTTTGTaGTGGGTAGGCTCTGAGAGGGCTTCCACTTCGAGATGTCATTCT +
Preference number: 1 (lower is better)
Translates to: RSTATADPEHSRHCL*WVGSERASTSRCHS
Trigger: AGAATGACATCTCGAAGTGGAAGCCCTCTCAGAGCCTACCCACCACAAACAGTGGCGTGAGTGCTCAGGATCGGCAGTTGCTGTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 90 bp AGTAGAACCCATGGGATATGGGGCAGAACAGTGCCCTATCAGCCATaGATGGTAGTGTTGGGCAAGAGAGGGATCCAAGAAGGCAAGGGA +
Preference number: 1 (lower is better)
Translates to: SRTHGIWGRTVPYQP*MVVLGKRGIQEGKG
Trigger: TCCCTTGCCTTCTTGGATCCCTCTCTTGCCCAACACTACCATGCATGGCTGATAGGGCACTGTTCTGCCCCATATCCCATGGGTTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR CCA 90 bp AACACCATCCCTTTCCTGGGGGTTTGCTTTCTCACTGGTTTCTGCTaGTGGCTCAAGAAACTGAACGCCTCGGGGGACATCATATGCGTC +
Preference number: 1 (lower is better)
Translates to: NTIPFLGVCFLTGFC*WLKKLNASGDIICV
Trigger: GACGCATATGATGTCCCCCGAGGCGTTCAGTTTCTTGAGCCACCAGCAGAAACCAGTGAGAAAGCAAACCCCCAGGAAAGGGATGGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 90 bp GCCATCTTGGTTGCCATGACTATGGTCTTGAGCTGCTCGCAGAGCTaGTTGCTGGAGTTCATGACTTTGTTGCGAATGTCCTGGGCAGTC +
Preference number: 1 (lower is better)
Translates to: AILVAMTMVLSCSQS*LLEFMTLLRMSWAV
Trigger: GACTGCCCAGGACATTCGCAACAAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCAGCTCAAGACCATAGTCATGGCAACCAAGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 90 bp GAGTGGTATGAGAAGGAGGGATATCATAGACGTCCTTTTGGTATCTaGATGGGTACTCGTATACGTAGCCATGGCCTGTCCTCACGGGGG +
Preference number: 1 (lower is better)
Translates to: EWYEKEGYHRRPFGI*MGTRIRSHGLSSRG
Trigger: CCCCCGTGAGGACAGGCCATGGCTACGTATACGAGTACCCATCCAGATACCAAAAGGACGTCTATGATATCCCTCCTTCTCATACCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 90 bp GGACATCATAAACACCATCCCTTTCCTGGGGGTTTGCTTTCTCACTaGTTTCTGCTGGTGGCTCAAGAAACTGAACGCCTCGGGGGACAT +
Preference number: 1 (lower is better)
Translates to: GHHKHHPFPGGLLSH*FLLVAQETERLGGH
Trigger: ATGTCCCCCGAGGCGTTCAGTTTCTTGAGCCACCAGCAGAAACCAGTGAGAAAGCAAACCCCCAGGAAAGGGATGGTGTTTATGATGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 90 bp CAATCGGTTGATCCCATCCACCAAGTCCCGAGAGCCTTTAGCATCTaGCGGGTTATGCAGAGGGACATCATAAACACCATCCCTTTCCTG +
Preference number: 1 (lower is better)
Translates to: QSVDPIHQVPRAFSI*RVMQRDIINTIPFL
Trigger: CAGGAAAGGGATGGTGTTTATGATGTCCCTCTGCATAACCCGCCAGATGCTAAAGGCTCTCGGGACTTGGTGGATGGGATCAACCGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 90 bp GTCTTTGCCACCATCACAAACCGGTCCAGATCGTCACACTTGTTCTaGGGCTTGTTGATGGCCAAGATATTCAGGGACCAGCTGCACTCA +
Preference number: 1 (lower is better)
Translates to: VFATITNRSRSSHLF*GLLMAKIFRDQLHS
Trigger: TGAGTGCAGCTGGTCCCTGAATATCTTGGCCATCAACAAGCCCCAGAACAAGTGTGACGATCTGGACCGGTTTGTGATGGTGGCAAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 90 bp AAGATATTCAGGGACCAGCTGCACTCATTTAAGTCATGGCTGGTTTaGCTCAGGATCTGGTGGGAGTCTTCAACTCGTTGCAGCTCCCGC +
Preference number: 1 (lower is better)
Translates to: KIFRDQLHSFKSWLV*LRIWWESSTRCSSR
Trigger: GCGGGAGCTGCAACGAGTTGAAGACTCCCACCAGATCCTGAGTCAAACCAGCCATGACTTAAATGAGTGCAGCTGGTCCCTGAATATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 90 bp TTCTCTGCACTGATGGTGGCACCTGATATACCTCTTGTTCTTGGGTaGCGTGGCCAGTGGGGACTTGGTAAATTCCCTGATTTTGGTAGG +
Preference number: 1 (lower is better)
Translates to: FSALMVAPDIPLVLG*RGQWGLGKFPDFGR
Trigger: CCTACCAAAATCAGGGAATTTACCAAGTCCCCACTGGCCACGGCACCCAAGAACAAGAGGTATATCAGGTGCCACCATCAGTGCAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 90 bp CTTGGTAAATTCCCTGATTTTGGTAGGAAGGTGGCACTTGGTAGATaGTGTCTCGGGGAGCAGCCTGTGGGTTTGGCACTTGATAGAGCT +
Preference number: 1 (lower is better)
Translates to: LGKFPDFGRKVALGR*CLGEQPVGLALDRA
Trigger: AGCTCTATCAAGTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAGTGCCACCTTCCTACCAAAATCAGGGAATTTACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 90 bp ATGGTGGCACCTGATATACCTCTTGTTCTTGGGTGCCGTGGCCAGTaGGGACTTGGTAAATTCCCTGATTTTGGTAGGAAGGTGGCACTT +
Preference number: 1 (lower is better)
Translates to: MVAPDIPLVLGCRGQ*GLGKFPDFGRKVAL
Trigger: AAGTGCCACCTTCCTACCAAAATCAGGGAATTTACCAAGTCCCCACTGGCCACGGCACCCAAGAACAAGAGGTATATCAGGTGCCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 90 bp GCTGCTGGATGGTTTCCTTTTCCCCAGTTGAGCTCGTATGTGACATaGACACCTGGGTTCTTCTTAACCACAAGCCAGAAACATGTGGGG +
Preference number: 1 (lower is better)
Translates to: AAGWFPFPQLSSYVT*TPGFFLTTSQKHVG
Trigger: CCCCACATGTTTCTGGCTTGTGGTTAAGAAGAACCCAGGTGTTCATGTCACATACGAGCTCAACTGGGGAAAAGGAAACCATCCAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR TCA 90 bp GACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTaGATATTAAGAGTCAGAAAGGCCTCTACTTGCAACTGGCGGATC +
Preference number: 1 (lower is better)
Translates to: DLASFPQVMGVVAPK*ILRVRKASTCNWRI
Trigger: GATCCGCCAGTTGCAAGTAGAGGCCTTTCTGACTCTTAATATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR CCA 90 bp GGTGAAGTTGAGAAATCAGAAACTGTAGAAGAATGCACCCCAAGTTaGGTGAAGCCACTATTGGCAGGCAAGGAGGGCTGCTGGATGGTT +
Preference number: 1 (lower is better)
Translates to: GEVEKSETVEECTPS*VKPLLAGKEGCWMV
Trigger: AACCATCCAGCAGCCCTCCTTGCCTGCCAATAGTGGCTTCACCCAACTTGGGGTGCATTCTTCTACAGTTTCTGATTTCTCAACTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR CCA 90 bp GGTATGAGAAGGAGGGATATCATAGACGTCCTTTTGGTATCTGGATaGGTACTCGTATACGTAGCCATGGCCTGTCCTCACGGGGGTTAT +
Preference number: 1 (lower is better)
Translates to: GMRRRDIIDVLLVSG*VLVYVAMACPHGGY
Trigger: ATAACCCCCGTGAGGACAGGCCATGGCTACGTATACGAGTACCCATCCAGATACCAAAAGGACGTCTATGATATCCCTCCTTCTCATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 90 bp TGGCCAAGATATTCAGGGACCAGCTGCACTCATTTAAGTCATGGCTaGTTTGACTCAGGATCTGGTGGGAGTCTTCAACTCGTTGCAGCT +
Preference number: 1 (lower is better)
Translates to: WPRYSGTSCTHLSHG*FDSGSGGSLQLVAA
Trigger: AGCTGCAACGAGTTGAAGACTCCCACCAGATCCTGAGTCAAACCAGCCATGACTTAAATGAGTGCAGCTGGTCCCTGAATATCTTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 90 bp TCTTCTCAGAACGTTGCCATCTCCAGCAAAGAGCGCTTGAACAGCTaGGCATTTCTAGAAAGGTCTGTCACTTGGTGCACCATTTCCTGC +
Preference number: 1 (lower is better)
Translates to: SSQNVAISSKERLNS*AFLERSVTWCTISC
Trigger: GCAGGAAATGGTGCACCAAGTGACAGACCTTTCTAGAAATGCCCAGCTGTTCAAGCGCTCTTTGCTGGAGATGGCAACGTTCTGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 90 bp CCATCACAAACCGGTCCAGATCGTCACACTTGTTCTGGGGCTTGTTaGTGGCCAAGATATTCAGGGACCAGCTGCACTCATTTAAGTCAT +
Preference number: 1 (lower is better)
Translates to: PSQTGPDRHTCSGAC*WPRYSGTSCTHLSH
Trigger: ATGACTTAAATGAGTGCAGCTGGTCCCTGAATATCTTGGCCATCAACAAGCCCCAGAACAAGTGTGACGATCTGGACCGGTTTGTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 90 bp GGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTaGTGTCTGTGCTGTGTCAATACTAACAGATGTGAGGAGACAGAC +
Preference number: 1 (lower is better)
Translates to: GVEVFHLPHEEPDGL*CLCCVNTNRCEETD
Trigger: GTCTGTCTCCTCACATCTGTTAGTATTGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR TCA 90 bp CCTCCAGCACCTGAACTATCAGAGCTTGGATCCACATATATATTCTaGAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATG +
Preference number: 1 (lower is better)
Translates to: PPAPELSELGSTYIF*NLLRKRAFGHLAIM
Trigger: CATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTTCAGGTGCTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR GCA 90 bp AAGGGAATGTTAGGTGAAGTTGAGAAATCAGAAACTGTAGAAGAATaGACCCCAAGTTGGGTGAAGCCACTATTGGCAGGCAAGGAGGGC +
Preference number: 1 (lower is better)
Translates to: KGMLGEVEKSETVEE*TPSWVKPLLAGKEG
Trigger: GCCCTCCTTGCCTGCCAATAGTGGCTTCACCCAACTTGGGGTGCATTCTTCTACAGTTTCTGATTTCTCAACTTCACCTAACATTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR GCA 90 bp GAAGCTGTGTGCCAGAGGCCATGGCCCCACTGGGTCTTTTTCTGTTaGTTATTGGAAGAATTAGGTCTGAAGAGGGAAGTAATTGACAAA +
Preference number: 1 (lower is better)
Translates to: EAVCQRPWPHWVFFC*LLEELGLKREVIDK
Trigger: TTTGTCAATTACTTCCCTCTTCAGACCTAATTCTTCCAATAAGCAACAGAAAAAGACCCAGTGGGGCCATGGCCTCTGGCACACAGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR GCA 90 bp GTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTaGTGTGTCAATACTAACAGATGTGAGGAGACAGACTATGGAATG +
Preference number: 1 (lower is better)
Translates to: VFHLPHEEPDGLWCL*CVNTNRCEETDYGM
Trigger: CATTCCATAGTCTGTCTCCTCACATCTGTTAGTATTGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR CCA 90 bp TTTATAGGCTTCACATTATTTCTACAAATGTACTTTTTACCCACGTaGGGCCCACTGGTTCCCCCAATGCTTCTCTGCACTGATGGTGGC +
Preference number: 1 (lower is better)
Translates to: FIGFTLFLQMYFLPT*GPLVPPMLLCTDGG
Trigger: GCCACCATCAGTGCAGAGAAGCATTGGGGGAACCAGTGGGCCCCACGTGGGTAAAAAGTACATTTGTAGAAATAATGTGAAGCCTATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 90 bp TGGTCCTGGCCTCTAAACACACAGGTCTCTCTTCCCTCCAGCACCTaGACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCT +
Preference number: 1 (lower is better)
Translates to: WSWPLNTQVSLPSST*TIRAWIHIYILKFA
Trigger: AGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTTCAGGTGCTGGAGGGAAGAGAGACCTGTGTGTTTAGAGGCCAGGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR TCA 90 bp CAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTaGAACAACCCAATCCTAACTGTGGTCCTGGCCTCTAAACACACA +
Preference number: 1 (lower is better)
Translates to: QGGNCSPFIVAVSQY*NNPILTVVLASKHT
Trigger: TGTGTGTTTAGAGGCCAGGACCACAGTTAGGATTGGGTTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR GCA 90 bp GACAAAGTGGAGGTACTCCTTCAGGAACAGCTCCACCTTGTCCACTaGTGTGCGTATTTCATTGATGTGTCTTTCCATATATCCGTAACA +
Preference number: 1 (lower is better)
Translates to: DKVEVLLQEQLHLVH*CAYFIDVSFHISVT
Trigger: TGTTACGGATATATGGAAAGACACATCAATGAAATACGCACAGCAGTGGACAAGGTGGAGCTGTTCCTGAAGGAGTACCTCCACTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 90 bp TGTAGAGTTCTTGGGGTTACTGTTTTCTGCTGTTCGTATCAGTATTaGCATTATTACGGTTATCACCAGAGCAGCTCAAGACACGCCAAT +
Preference number: 1 (lower is better)
Translates to: CRVLGVTVFCCSYQY*HYYGYHQSSSRHAN
Trigger: ATTGGCGTGTCTTGAGCTGCTCTGGTGATAACCGTAATAATGCCAATACTGATACGAACAGCAGAAAACAGTAACCCCAAGAACTCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR GCA 90 bp TGGTCCTTGATGATCATCTGTAGAGTTCTTGGGGTTACTGTTTTCTaGTGTTCGTATCAGTATTGGCATTATTACGGTTATCACCAGAGC +
Preference number: 1 (lower is better)
Translates to: WSLMIICRVLGVTVF*CSYQYWHYYGYHQS
Trigger: GCTCTGGTGATAACCGTAATAATGCCAATACTGATACGAACAGCAGAAAACAGTAACCCCAAGAACTCTACAGATGATCATCAAGGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR GCA 90 bp GTTGCGGGGGTGGGTGATTCGGGGACAGGCTCTGGTGCCTTCGAGCCACCGGTTGGTTGCCTGGGACAATaGCTTGCCGACCGTGTAATG +
Preference number: 2 (lower is better)
Translates to: VAGVGDSGTGSGAFEPPVGCLGQ*LADRVM
Trigger: CATTACACGGTCGGCAAGGCATTGTCCCAGGCAACC...AACCGGTGGCTCGAAGGCACCAGAGCCTGTCCCCGAATCACCCACCCCCGCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp TGCAAGCTGCCAGGGCCGGGTCTGAAGAGGGCCTCTGCGTTGGTGTaGATGGTTGTGGTGAGCTGCTTGGCGTCATCGGGCACCGTCTTT +
Preference number: 2 (lower is better)
Translates to: CKLPGPGLKRASALV*MVVVSCLASSGTVF
Trigger: AAAGACGGTGCCCGATGACGCCAAGCAGCTCACCACAACCATCAACACCAACGCAGAGGCCCTCTTCAGACCCGGCCCTGGCAGCTTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp GGCGTCATCGGGCACCGTCTTTGCCACCATCACAAACCGGTCCAGATCGTCACACCACGTGGGGCCCACTaGTTCCCCCAATGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: GVIGHRLCHHHKPVQIVTPRGAH*FPQCFS
Trigger: AGAGAAGCATTGGGGGAACCAGTGGGCCCCACGTGG...TGTGACGATCTGGACCGGTTTGTGATGGTGGCAAAGACGGTGCCCGATGACGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp CTGGAGGCAGTCTCCTGCATGGGACCAATCAGAAGCTTCACCCGGTaGCCTGGGACAATGCCTTGCCGACCGTGTAATGAGCACAGCCAC +
Preference number: 2 (lower is better)
Translates to: LEAVSCMGPIRSFTR*PGTMPCRPCNEHSH
Trigger: GTGGCTGTGCTCATTACACGGTCGGCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTCTGATTGGTCCCATGCAGGAGACTGCCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp GCAGGTTGGAGGAATGTCATAAACCCCCTCCGGTCTGAGGTCCGGCCTTCCAGCTATACCTCTTGTTCTTaGGTGCCGTGGCCAGTGGGG +
Preference number: 2 (lower is better)
Translates to: AGWRNVINPLRSEVRPSSYTSCS*VPWPVG
Trigger: CCCCACTGGCCACGGCACCCAAGAACAAGAGGTATA...GCTGGAAGGCCGGACCTCAGACCGGAGGGGGTTTATGACATTCCTCCAACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR GCA 90 bp CGCGGGGGCTGGGCTGAGCTGACACAACTGAAGAGTGCGTCAATGGCGTTGAGATCTCAGAACCATCACTaGTGCTACAGTCAGGGGCCT +
Preference number: 2 (lower is better)
Translates to: RGGWAELTQLKSASMALRSQNHH*CYSQGP
Trigger: AGGCCCCTGACTGTAGCAGCAGTGATGGTTCTGAGA...TCTCAACGCCATTGACGCACTCTTCAGTTGTGTCAGCTCAGCCCAGCCCCCGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp GTCTTGAGCTGCTCGCAGAGCTGGTTGCTGGAGTTCATGACTTTGTaGCGAATGTCCTGGGCAGTCACCTGCCGTGTCAGCGTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: VLSCSQSWLLEFMTL*RMSWAVTCRVSVSP
Trigger: TGGAGACACGCTGACACGGCAGGTGACTGCCCAGGACATTCGCAACAAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCAGCTCAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR TCA 90 bp TTTTCCCTAAGCCCTGCTTCATCCCGGCAAGCAGAGGGCGGAATGGCATATACCCACCCTTGCACAGGCTaGAGACATCAGGGTTGCCAG +
Preference number: 2 (lower is better)
Translates to: FSLSPASSRQAEGGMAYTHPCTG*RHQGCQ
Trigger: CTGGCAACCCTGATGTCTTCAGCCTGTGCAAGGGTG...GGTATATGCCATTCCGCCCTCTGCTTGCCGGGATGAAGCAGGGCTTAGGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR TCA 90 bp CGCGGGGGCTGGGCTGAGCTGACACAACTGAAGAGTGCGTCAATGGCGTTGAGATTGCAACAGCTCCCTTaGCAAAGTGGAGGTACTCCT +
Preference number: 2 (lower is better)
Translates to: RGGWAELTQLKSASMALRLQQLP*QSGGTP
Trigger: AGGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAA...TCTCAACGCCATTGACGCACTCTTCAGTTGTGTCAGCTCAGCCCAGCCCCCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp GCAGGCAGCATTTGCAACAGCTCCCTTGACAAAGTGGAGGTACTCCTTCAGGAATTCGGGGACAGGCTCTaGTGCCTTCGAGCCACCGGT +
Preference number: 2 (lower is better)
Translates to: AGSICNSSLDKVEVLLQEFGDRL*CLRATG
Trigger: ACCGGTGGCTCGAAGGCACCAGAGCCTGTCCCCGAA...TTCCTGAAGGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp TTCTTGGGTGCCGTGGCCAGTGGGGACTTGGTAAATTCCCTGATTTaGGTAGGAAGGTGGCACTTGGTAGATGGTGTCTCGGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: FLGAVASGDLVNSLI*VGRWHLVDGVSGSS
Trigger: GCTGCTCCCCGAGACACCATCTACCAAGTGCCACCTTCCTACCAAAATCAGGGAATTTACCAAGTCCCCACTGGCCACGGCACCCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp GACATGTTACTCCGGGTGCTGCCTGTACTGGAGAAAGACAATCGGTaGATCCCATCCACCAAGTCCCGAGAGCCTTTAGCATCTGGCGGG +
Preference number: 2 (lower is better)
Translates to: DMLLRVLPVLEKDNR*IPSTKSREPLASGG
Trigger: CCCGCCAGATGCTAAAGGCTCTCGGGACTTGGTGGATGGGATCAACCGATTGTCTTTCTCCAGTACAGGCAGCACCCGGAGTAACATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp TGGAGGATGAGTTCCGGGAGGCAGGCAGCATTTGCAACAGCTCCCTaGACAAAGTGGAGGTACTCCTTCAGGAACAGCTCCACCTTGTCC +
Preference number: 2 (lower is better)
Translates to: WRMSSGRQAAFATAP*TKWRYSFRNSSTLS
Trigger: GGACAAGGTGGAGCTGTTCCTGAAGGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGCCTCCCGGAACTCATCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp ATGGTCTTGAGCTGCTCGCAGAGCTGGTTGCTGGAGTTCATGACTTaGTTGCGAATGTCCTGGGCAGTCACCTGCCGTGTCAGCGTGTCT +
Preference number: 2 (lower is better)
Translates to: MVLSCSQSWLLEFMT*LRMSWAVTCRVSVS
Trigger: AGACACGCTGACACGGCAGGTGACTGCCCAGGACATTCGCAACAAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCAGCTCAAGACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR TCA 90 bp AGTTCCGGGAGGCAGGCAGCATTTGCAACAGCTCCCTTGACAAAGTGGAGGTACAAGAGCCTTTTGTCCTaGGCTGGGGAGGCTGACAGT +
Preference number: 2 (lower is better)
Translates to: SSGRQAAFATAPLTKWRYKSLLS*AGEADS
Trigger: ACTGTCAGCCTCCCCAGCTCAGGACAAAAGGCTCTT...GTACCTCCACTTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGCCTCCCGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR GCA 90 bp CAGTCGGTAGTGACCAGTGCCATTAGGCTGGAGACACCCATCTCAAGGGCCTGCTTTTTCCCTAAGCCCTaGTTCATCCCGGCAAGCAGA +
Preference number: 2 (lower is better)
Translates to: QSVVTSAIRLETPISRACFFPKP*FIPASR
Trigger: TCTGCTTGCCGGGATGAAGCAGGGCTTAGGGAAAAA...GCAGGCCCTTGAGATGGGTGTCTCCAGCCTAATGGCACTGGTCACTACCGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp CACTTGGTAGATGGTGTCTCGGGGAGCAGCCTGTGGGTTTGGCACTaGATAGAGCTTCTGTTGGCCAAAGGTCTGCTGCATCAGTCCAGA +
Preference number: 2 (lower is better)
Translates to: HLVDGVSGSSLWVWH*IELLLAKGLLHQSR
Trigger: TCTGGACTGATGCAGCAGACCTTTGGCCAACAGAAGCTCTATCAAGTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp AAGGTGGCACTTGGTAGATGGTGTCTCGGGGAGCAGCCTGTGGGTTaGGCACTTGATAGAGCTTCTGTTGGCCAAAGGTCTGCTGCATCA +
Preference number: 2 (lower is better)
Translates to: KVALGRWCLGEQPVG*ALDRASVGQRSAAS
Trigger: TGATGCAGCAGACCTTTGGCCAACAGAAGCTCTATCAAGTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAGTGCCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp ATCTGGTGGGAGTCTTCAACTCGTTGCAGCTCCCGCTTCATCTTGTaGTGGAGGATGAGTTCCGGGAGGCAGGCAGCATTTGCAACAGCT +
Preference number: 2 (lower is better)
Translates to: IWWESSTRCSSRFIL*WRMSSGRQAAFATA
Trigger: AGCTGTTGCAAATGCTGCCTGCCTCCCGGAACTCATCCTCCACAACAAGATGAAGCGGGAGCTGCAACGAGTTGAAGACTCCCACCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp AGGATCTGGTGGGAGTCTTCAACTCGTTGCAGCTCCCGCTTCATCTaGTTGTGGAGGATGAGTTCCGGGAGGCAGGCAGCATTTGCAACA +
Preference number: 2 (lower is better)
Translates to: RIWWESSTRCSSRFI*LWRMSSGRQAAFAT
Trigger: TGTTGCAAATGCTGCCTGCCTCCCGGAACTCATCCTCCACAACAAGATGAAGCGGGAGCTGCAACGAGTTGAAGACTCCCACCAGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp GTCATGGCTGGTTTGACTCAGGATCTGGTGGGAGTCTTCAACTCGTaGCAGCTCCCGCTTCATCTTGTTGTGGAGGATGAGTTCCGGGAG +
Preference number: 2 (lower is better)
Translates to: VMAGLTQDLVGVFNS*QLPLHLVVEDEFRE
Trigger: CTCCCGGAACTCATCCTCCACAACAAGATGAAGCGGGAGCTGCAACGAGTTGAAGACTCCCACCAGATCCTGAGTCAAACCAGCCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp GGCACCGTCTTTGCCACCATCACAAACCGGTCCAGATCGTCACACTaGTTCTGGGGCTTGTTGATGGCCAAGATATTCAGGGACCAGCTG +
Preference number: 2 (lower is better)
Translates to: GTVFATITNRSRSSH*FWGLLMAKIFRDQL
Trigger: CAGCTGGTCCCTGAATATCTTGGCCATCAACAAGCCCCAGAACAAGTGTGACGATCTGGACCGGTTTGTGATGGTGGCAAAGACGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp AGTAGAAGCACAGCAACTGCCGATCCTGAGCACTCACGCCACTGTTaGTGGTGGGTAGGCTCTGAGAGGGCTTCCACTTCGAGATGTCAT +
Preference number: 2 (lower is better)
Translates to: SRSTATADPEHSRHC*WWVGSERASTSRCH
Trigger: ATGACATCTCGAAGTGGAAGCCCTCTCAGAGCCTACCCACCACAAACAGTGGCGTGAGTGCTCAGGATCGGCAGTTGCTGTGCTTCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp CAAAGAGCGCTTGAACAGCTGGGCATTTCTAGAAAGGTCTGTCACTaGGTGCACCATTTCCTGCAGGGCCGTGGTGCTGGGGTAATGGAG +
Preference number: 2 (lower is better)
Translates to: QRALEQLGISRKVCH*VHHFLQGRGAGVME
Trigger: CTCCATTACCCCAGCACCACGGCCCTGCAGGAAATGGTGCACCAAGTGACAGACCTTTCTAGAAATGCCCAGCTGTTCAAGCGCTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR TCA 90 bp TCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCCAATCCTTGGAACTCCCTaGGCCAGTGATCCACACATC +
Preference number: 2 (lower is better)
Translates to: SISTDALHAHTSVPSSMPILGTP*ASDPHI
Trigger: GATGTGTGGATCACTGGCTCAGGGAGTTCCAAGGAT...TGGCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR TCA 90 bp TGCAGCTCCCGCTTCATCTTGTTGTGGAGGATGAGTTCCGGGAGGCAGGCAGCACAGTTGTATTTTACATaGAGGTCCTTCCCTGCTGGC +
Preference number: 2 (lower is better)
Translates to: CSSRFILLWRMSSGRQAAQLYFT*RSFPAG
Trigger: GCCAGCAGGGAAGGACCTTCATGTAAAATACAACTG...TGCTGCCTGCCTCCCGGAACTCATCCTCCACAACAAGATGAAGCGGGAGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp TCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCCATCTGAAACTGGTGCCTaGGAGGCTGTGCTGGGTTTT +
Preference number: 2 (lower is better)
Translates to: SISTDALHAHTSVPSSMPSETGA*EAVLGF
Trigger: AAAACCCAGCACAGCCTCCCAGGCACCAGTTTCAGA...TGGCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CCA 90 bp CTGAATGCCTTTCCCCCACCAAGCCCTTCCCAAACAGATAATATGTCTCTATCCAGCCTTCCGAGTAGCTaGGACTACAGGCACCCGCCC +
Preference number: 2 (lower is better)
Translates to: LNAFPPPSPSQTDNMSLSSLPSS*DYRHPP
Trigger: GGGCGGGTGCCTGTAGTCCCAGCTACTCGGAAGGCT...GGATAGAGACATATTATCTGTTTGGGAAGGGCTTGGTGGGGGAAAGGCATTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAGGCAGTGCCTTGTTGTaGGCCTGGGCCTTGTGGTCA +
Preference number: 2 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSGSALL*AWALWS
Trigger: TGACCACAAGGCCCAGGCCCACAACAAGGCACTGCC...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR TCA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGGTGGTGGGTAGGCTCTaGGAGGGCTTCCACTTCGAG +
Preference number: 2 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKVVGRL*EGFHFE
Trigger: CTCGAAGTGGAAGCCCTCTCAGAGCCTACCCACCAC...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR GCA 90 bp GCAGGTTGGAGGAATGTCATAAACCCCCTCCGGTCTGAGGTCCGGCCTTCCAGCTGCAGCATTAGAAGGTaGTTACTAAGGTGCTTCGTA +
Preference number: 2 (lower is better)
Translates to: AGWRNVINPLRSEVRPSSCSIRR*LLRCFV
Trigger: TACGAAGCACCTTAGTAAGCACCTTCTAATGCTGCA...GCTGGAAGGCCGGACCTCAGACCGGAGGGGGTTTATGACATTCCTCCAACCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp ACCCCAAGTTGGGTGAAGCCACTATTGGCAGGCAAGGAGGGCTGCTGGATGGTTCTCAAGACACGCCAATaGGAAACCCCAGGAGAAAAT +
Preference number: 2 (lower is better)
Translates to: TPSWVKPLLAGKEGCWMVLKTRQ*ETPGEN
Trigger: ATTTTCTCCTGGGGTTTCCCATTGGCGTGTCTTGAG...AACCATCCAGCAGCCCTCCTTGCCTGCCAATAGTGGCTTCACCCAACTTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CCA 90 bp TGTCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCAGGCCATGGCCCCACTaGGTCTTTTTCTGTTGCTTA +
Preference number: 2 (lower is better)
Translates to: CPFPQMPCTPIPLCLHPCRPWPH*VFFCCL
Trigger: TAAGCAACAGAAAAAGACCCAGTGGGGCCATGGCCT...GCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CCA 90 bp TCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCCAAGAACCCATGGGATATaGGGCAGAACAGTGCCCTAT +
Preference number: 2 (lower is better)
Translates to: SISTDALHAHTSVPSSMPRTHGI*GRTVPY
Trigger: ATAGGGCACTGTTCTGCCCCATATCCCATGGGTTCT...TGGCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CCA 90 bp ATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGCCGCAAGAGGGCTTTTaGGCACTTGGCCATCATGTG +
Preference number: 2 (lower is better)
Translates to: MIKDLASFPQVMGVVAPKPQEGF*ALGHHV
Trigger: CACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGG...CTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CCA 90 bp CATGACTATGGTCTTGAGCTGCTCGCAGAGCTGGTTGCTGGAGTTCATGACTTTCGCCACTGTTTGTGGTaGGTAGGCTCTGAGAGGGCT +
Preference number: 2 (lower is better)
Translates to: HDYGLELLAELVAGVHDFRHCLW*VGSERA
Trigger: AGCCCTCTCAGAGCCTACCCACCACAAACAGTGGCG...AAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCAGCTCAAGACCATAGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGTTTCCTGCAGGGCCGTaGTGCTGGGGTAATGGAGGG +
Preference number: 2 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKFPAGP*CWGNGG
Trigger: CCCTCCATTACCCCAGCACCACGGCCCTGCAGGAAA...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp ATCTTGGTTGCCATGACTATGGTCTTGAGCTGCTCGCAGAGCTGGTaGCTGGAGTTCATGACTTTGTTGCGAATGTCCTGGGCAGTCACC +
Preference number: 2 (lower is better)
Translates to: ILVAMTMVLSCSQSW*LEFMTLLRMSWAVT
Trigger: GGTGACTGCCCAGGACATTCGCAACAAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCAGCTCAAGACCATAGTCATGGCAACCAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR TCA 90 bp AGCACTTATCACTTGTGGTTTGACGGTCTTGATGCATCTCATCTCTTCTTCCAGACGATCTCGATCTCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 2 (lower is better)
Translates to: STYHLWFDGLDASHLFFQTISIS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGAGATCGAGATCGT...CTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGATAAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR TCA 90 bp TTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAATATCATATGCGTCGTTCTaGGAGCCCACTGACTGTCCG +
Preference number: 2 (lower is better)
Translates to: FTCPMKNLMACGVCAVSISYASF*EPTDCP
Trigger: CGGACAGTCAGTGGGCTCTCAGAACGACGCATATGA...TATTGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp AGTTCCGGGAGGCAGGCAGCATTTGCAACAGCTCCCTTGACAAAGTGGAGGTACGAACCTGATGGCTTGTaGTGTCTGTGCTGTGTCAAT +
Preference number: 2 (lower is better)
Translates to: SSGRQAAFATAPLTKWRYEPDGL*CLCCVN
Trigger: ATTGACACAGCACAGACACCACAAGCCATCAGGTTC...GTACCTCCACTTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGCCTCCCGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp AAGGCCTCTACTTGCAACTGGCGGATCAAACCATTCCCCTATTTTGGTGAACAACTTCACCCGGTTGCCTaGGACAATGCCTTGCCGACC +
Preference number: 2 (lower is better)
Translates to: KASTCNWRIKPFPYFGEQLHPVA*DNALPT
Trigger: GGTCGGCAAGGCATTGTCCCAGGCAACCGGGTGAAG...TTGTTCACCAAAATAGGGGAATGGTTTGATCCGCCAGTTGCAAGTAGAGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp GCCACCATCACAAACCGGTCCAGATCGTCACACTTGTTCTGGGGCTaGTTGATGGCCAAGATATTCAGGGACCAGCTGCACTCATTTAAG +
Preference number: 2 (lower is better)
Translates to: ATITNRSRSSHLFWG*LMAKIFRDQLHSFK
Trigger: CTTAAATGAGTGCAGCTGGTCCCTGAATATCTTGGCCATCAACAAGCCCCAGAACAAGTGTGACGATCTGGACCGGTTTGTGATGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp GGGCTTCCACTTCGAGATGTCATTCTCCACGGGCTTTGTAATCTCTaGTTCCAACAGCTGGAACTGGCTCAGCTGATGATGTTCCAGCTG +
Preference number: 2 (lower is better)
Translates to: GLPLRDVILHGLCNL*FQQLELAQLMMFQL
Trigger: CAGCTGGAACATCATCAGCTGAGCCAGTTCCAGCTGTTGGAACAAGAGATTACAAAGCCCGTGGAGAATGACATCTCGAAGTGGAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR GCA 90 bp TGTCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCATGGAATCAGATGTATaGTTGCCTATGAGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: CPFPQMPCTPIPLCLHPCMESDV*LPMRLA
Trigger: TGCCAGCCTCATAGGCAAGCATACATCTGATTCCAT...GCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR GCA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGCCTGGGACAATGCCTTaGCGACCGTGTAATGAGCAC +
Preference number: 2 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKPGTMP*RPCNEH
Trigger: GTGCTCATTACACGGTCGGCAAGGCATTGTCCCAGG...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR GCA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTCTGGAGGCAGTCTCCTaGATGGGACCAATCAGAAGC +
Preference number: 2 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVLEAVS*MGPIRS
Trigger: GCTTCTGATTGGTCCCATGCAGGAGACTGCCTCCAG...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR GCA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTATGTTGGCCAAAGGTCTaGTGCATCAGTCCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVCWPKV*CISPEA
Trigger: TGCCTCTGGACTGATGCAGCAGACCTTTGGCCAACA...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR GCA 90 bp GACGTAATCGTAGTCATCCATCCAGCTCCTCTCAGAACCATCACTGCTGCTACACACTGGTTCCCCCAATaGTTCTCTGCACTGATGGTG +
Preference number: 2 (lower is better)
Translates to: DVIVVIHPAPLRTITAATHWFPQ*FSALMV
Trigger: CACCATCAGTGCAGAGAAGCATTGGGGGAACCAGTG...TGTAGCAGCAGTGATGGTTCTGAGAGGAGCTGGATGGATGACTACGATTACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTCCGCAAGAGGGCTTTTaGGCACTTGGCCATCATGTG +
Preference number: 2 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVPQEGF*ALGHHV
Trigger: CACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGG...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CCA 90 bp GCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAAGGGTGCCGTGGCCAGTaGGGACTTGGTAAATTCCCT +
Preference number: 2 (lower is better)
Translates to: APGRQLLSFYCSCLSVLKGCRGQ*GLGKFP
Trigger: AGGGAATTTACCAAGTCCCCACTGGCCACGGCACCC...TTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp CACCTGATATACCTCTTGTTCTTGGGTGCCGTGGCCAGTGGGGACTaGGTAAATTCCCTGATTTTGGTAGGAAGGTGGCACTTGGTAGAT +
Preference number: 2 (lower is better)
Translates to: HLIYLLFLGAVASGD*VNSLILVGRWHLVD
Trigger: ATCTACCAAGTGCCACCTTCCTACCAAAATCAGGGAATTTACCAAGTCCCCACTGGCCACGGCACCCAAGAACAAGAGGTATATCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp GGTTATGCAGAGGGACATCATAAACACCATCCCTTTCCTGGGGGTTaGCTTTCTCACTGGTTTCTGCTGGTGGCTCAAGAAACTGAACGC +
Preference number: 2 (lower is better)
Translates to: GYAEGHHKHHPFPGG*LSHWFLLVAQETER
Trigger: GCGTTCAGTTTCTTGAGCCACCAGCAGAAACCAGTGAGAAAGCAAACCCCCAGGAAAGGGATGGTGTTTATGATGTCCCTCTGCATAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp GAGTGCGTCAATGGCGTTGAGAAGGGAAATGAAATGGGTCTCACATaGGTCATAGTAGAAGCACAGCAACTGCCGATCCTGAGCACTCAC +
Preference number: 2 (lower is better)
Translates to: ECVNGVEKGNEMGLT*VIVEAQQLPILSTH
Trigger: GTGAGTGCTCAGGATCGGCAGTTGCTGTGCTTCTACTATGACCAATGTGAGACCCATTTCATTTCCCTTCTCAACGCCATTGACGCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR TCA 90 bp CAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGAACACTTGCAAGAGGCAGGCTGCTCGTaGCTGGAGGCAGTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: QTRISHAMPHDLEGEHLQEAGCS*LEAVSC
Trigger: GCAGGAGACTGCCTCCAGTCACGAGCAGCCTGCCTC...TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR TCA 90 bp ATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGACTGATGGTGGCACCTaGTATACCTCTTGTTCTTGG +
Preference number: 2 (lower is better)
Translates to: MIKDLASFPQVMGVVAPKTDGGT*YTSCSW
Trigger: CCAAGAACAAGAGGTATATCAGGTGCCACCATCAGT...CTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR TCA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTAGAAAGACAATCGGTTaGTCCCATCCACCAAGTCCC +
Preference number: 2 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCRKTIG*SHPPSP
Trigger: GGGACTTGGTGGATGGGATCAACCGATTGTCTTTCT...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR TCA 90 bp TTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAATATGTTCTGGGGCTTGTTaGTGGCCAAGATATTCAGGG +
Preference number: 2 (lower is better)
Translates to: FTCPMKNLMACGVCAVSICSGAC*WPRYSG
Trigger: CCCTGAATATCTTGGCCATCAACAAGCCCCAGAACA...TATTGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR GCA 90 bp TGTCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCGGGGTTACTGTTTTCTaGTGTTCGTATCAGTATTGG +
Preference number: 2 (lower is better)
Translates to: CPFPQMPCTPIPLCLHPCGVTVF*CSYQYW
Trigger: CCAATACTGATACGAACAGCAGAAAACAGTAACCCC...GCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR GCA 90 bp GGCGTCATCGGGCACCGTCTTTGCCACCATCACAAACCGGTCCAGATCGTCACAAGGTGCTTACTAAGGTaGTTCGTAATTCATGGTTTT +
Preference number: 2 (lower is better)
Translates to: GVIGHRLCHHHKPVQIVTRCLLR*FVIHGF
Trigger: AAAACCATGAATTACGAAGCACCTTAGTAAGCACCT...TGTGACGATCTGGACCGGTTTGTGATGGTGGCAAAGACGGTGCCCGATGACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR GCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAACATGTTACTCCGGGTaGTGCCTGTACTGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSTCYSG*CLYWRK
Trigger: CTTTCTCCAGTACAGGCAGCACCCGGAGTAACATGT...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp ATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTATGCTTCCCAGATTTaGGAGTGCCAGGCTCAGAAT +
Preference number: 2 (lower is better)
Translates to: MIKDLASFPQVMGVVAPKYASQI*ECQAQN
Trigger: ATTCTGAGCCTGGCACTCCCAAATCTGGGAAGCATA...CTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR CAA 90 bp TTTCCCCCACCAAGCCCTTCCCAAACAGATAATATGTCTCTATCCTaGGAACTCCCTGAGCCAGTGATCCACACATCTCTGACAGCACTT +
Preference number: 2 (lower is better)
Translates to: FPPPSPSQTDNMSLS*ELPEPVIHTSLTAL
Trigger: AAGTGCTGTCAGAGATGTGTGGATCACTGGCTCAGGGAGTTCCAAGGATAGAGACATATTATCTGTTTGGGAAGGGCTTGGTGGGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR CAA 90 bp TACCCCTTGAGTGGTATGAGAAGGAGGGATATCATAGACGTCCTTTaGGTATCTGGATGGGTACTCGTATACGTAGCCATGGCCTGTCCT +
Preference number: 2 (lower is better)
Translates to: YPLSGMRRRDIIDVL*VSGWVLVYVAMACP
Trigger: AGGACAGGCCATGGCTACGTATACGAGTACCCATCCAGATACCAAAAGGACGTCTATGATATCCCTCCTTCTCATACCACTCAAGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp ACCATCACAAACCGGTCCAGATCGTCACACTTGTTCTGGGGCTTGTaGATGGCCAAGATATTCAGGGACCAGCTGCACTCATTTAAGTCA +
Preference number: 2 (lower is better)
Translates to: TITNRSRSSHLFWGL*MAKIFRDQLHSFKS
Trigger: TGACTTAAATGAGTGCAGCTGGTCCCTGAATATCTTGGCCATCAACAAGCCCCAGAACAAGTGTGACGATCTGGACCGGTTTGTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR GCA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATATGGAATCAGATGTATaGTTGCCTATGAGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNMESDV*LPMRLA
Trigger: TGCCAGCCTCATAGGCAAGCATACATCTGATTCCAT...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp GACGTAATCGTAGTCATCCATCCAGCTCCTCTCAGAACCATCACTGCTGCTACATATGCTTCCCAGATTTaGGAGTGCCAGGCTCAGAAT +
Preference number: 2 (lower is better)
Translates to: DVIVVIHPAPLRTITAATYASQI*ECQAQN
Trigger: ATTCTGAGCCTGGCACTCCCAAATCTGGGAAGCATA...TGTAGCAGCAGTGATGGTTCTGAGAGGAGCTGGATGGATGACTACGATTACGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGAGGCAGTCTCCTGCATaGGACCAATCAGAAGCTTCA +
Preference number: 2 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKRQSPA*DQSEAS
Trigger: TGAAGCTTCTGATTGGTCCCATGCAGGAGACTGCCT...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATCGTCCTTTTGGTATCTaGATGGGTACTCGTATACGT +
Preference number: 2 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNRPFGI*MGTRIR
Trigger: ACGTATACGAGTACCCATCCAGATACCAAAAGGACG...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp ATCAGGGTTGCCAGAACAGCTCAAAGCATGGAATCAGATGTATGCTaGCCTATGAGGCTGGCAGAAGGAAACAAAATTCTCTCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: IRVARTAQSMESDVC*PMRLAEGNKILSGG
Trigger: GCCTCCAGAGAGAATTTTGTTTCCTTCTGCCAGCCTCATAGGCAAGCATACATCTGATTCCATGCTTTGAGCTGTTCTGGCAACCCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379433.5
ENST00000448183.6
3UTR CAA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTaGTGGTGTCTGTGCTGTGTCAATACTAACAGATGTGAGGAGACA +
Preference number: 2 (lower is better)
Translates to: HGVEVFHLPHEEPDG*WCLCCVNTNRCEET
Trigger: TGTCTCCTCACATCTGTTAGTATTGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR TCA 90 bp TGCCTGGGAGGCTGTGCTGGGTTTTCTACAGCTTCTTTGGGTAAGGGGGAACATAAAATGCTCATCAGATaGGATCTTTTCAGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: CLGGCAGFSTASLGKGEHKMLIR*DLFSGG
Trigger: ACCTCCACTGAAAAGATCTCATCTGATGAGCATTTT...ATGTTCCCCCTTACCCAAAGAAGCTGTAGAAAACCCAGCACAGCCTCCCAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR GCA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATTGCAGCATTAGAAGGTaGTTACTAAGGTGCTTCGTA +
Preference number: 2 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNCSIRR*LLRCFV
Trigger: TACGAAGCACCTTAGTAAGCACCTTCTAATGCTGCA...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR GCA 90 bp CTGTGCTGTGTCAATACTAACAGATGTGAGGAGACAGACTATGGAATGGACGCTTCCCAGATTTGGGAGTaGCAGGCTCAGAATCATCAC +
Preference number: 2 (lower is better)
Translates to: LCCVNTNRCEETDYGMDASQIWE*QAQNHH
Trigger: GTGATGATTCTGAGCCTGGCACTCCCAAATCTGGGA...AGCGTCCATTCCATAGTCTGTCTCCTCACATCTGTTAGTATTGACACAGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR GCA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGCCCCAGGGAGGCAATTaGTCTCCTTTTATTGTAGCT +
Preference number: 2 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLPQGGN*SPFIVA
Trigger: AGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGG...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR GCA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCGAAGCTTCACCCGGTTaGCTGGGACAATGCCTTGCC +
Preference number: 2 (lower is better)
Translates to: LLVICEYIYPWGRSISPAEASPG*LGQCLA
Trigger: GGCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTC...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR GCA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCCCTCTTGTTCTTGGGTaGCGTGGCCAGTGGGGACTT +
Preference number: 2 (lower is better)
Translates to: LLVICEYIYPWGRSISPAPLVLG*RGQWGL
Trigger: AAGTCCCCACTGGCCACGGCACCCAAGAACAAGAGG...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR GCA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCATGGTTGTGGTGAGCTaGTTGGCGTCATCGGGCACC +
Preference number: 2 (lower is better)
Translates to: LLVICEYIYPWGRSISPAMVVVS*LASSGT
Trigger: GGTGCCCGATGACGCCAAGCAGCTCACCACAACCAT...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTCAGGCTGCTCGTGACTaGAGGCAGTCTCCTGCATGG +
Preference number: 2 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSQAARD*RQSPAW
Trigger: CCATGCAGGAGACTGCCTCCAGTCACGAGCAGCCTG...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp CACAAATGCAGAAGATTGAACAGCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTCGTCACACTTGTTCTaGGGCTTGTTGATGGCCAAG +
Preference number: 2 (lower is better)
Translates to: HKCRRLNSPREAIALLLLSSHLF*GLLMAK
Trigger: CTTGGCCATCAACAAGCCCCAGAACAAGTGTGACGA...CAATAAAAGGAGAGCAATTGCCTCCCTGGGGCTGTTCAATCTTCTGCATTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 90 bp GTGTGCCAGAGGCCATGGCCCCACTGGGTCTTTTTCTGTTGCTTATaGGAAGAATTAGGTCTGAAGAGGGAAGTAATTGACAAACAGAAG +
Preference number: 2 (lower is better)
Translates to: VCQRPWPHWVFFCCL*EELGLKREVIDKQK
Trigger: CTTCTGTTTGTCAATTACTTCCCTCTTCAGACCTAATTCTTCCAATAAGCAACAGAAAAAGACCCAGTGGGGCCATGGCCTCTGGCACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR CAA 90 bp GCTCCCTTGACAAAGTGGAGGTACTCCTTCAGGAACAGCTCCACCTaGTCCACTGCTGTGCGTATTTCATTGATGTGTCTTTCCATATAT +
Preference number: 2 (lower is better)
Translates to: APLTKWRYSFRNSST*STAVRISLMCLSIY
Trigger: ATATATGGAAAGACACATCAATGAAATACGCACAGCAGTGGACAAGGTGGAGCTGTTCCTGAAGGAGTACCTCCACTTTGTCAAGGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR TCA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATTCCACATATATATTCTaGAATTTGCTCCGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNSTYIF*NLLRKR
Trigger: CCTCTTGCGGAGCAAATTTCAGAATATATATGTGGA...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR TCA 90 bp GACGTAATCGTAGTCATCCATCCAGCTCCTCTCAGAACCATCACTGCTGCTACAGCTGTCTCTCAGTATTaGAACAACCCAATCCTAACT +
Preference number: 2 (lower is better)
Translates to: DVIVVIHPAPLRTITAATAVSQY*NNPILT
Trigger: AGTTAGGATTGGGTTGTTTCAATACTGAGAGACAGC...TGTAGCAGCAGTGATGGTTCTGAGAGGAGCTGGATGGATGACTACGATTACGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR TCA 90 bp ATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTTTTGGAAAACCTCATaGCTGAACCACTCACAAATG +
Preference number: 2 (lower is better)
Translates to: MIKDLASFPQVMGVVAPKFWKTS*LNHSQM
Trigger: CATTTGTGAGTGGTTCAGTCATGAGGTTTTCCAAAA...CTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR TCA 90 bp ATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTCTCTTGGTAATATGTaGATACATTTACCCATGGGG +
Preference number: 2 (lower is better)
Translates to: MIKDLASFPQVMGVVAPKSLGNM*IHLPMG
Trigger: CCCCATGGGTAAATGTATTCACATATTACCAAGAGA...CTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR TCA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATTCTCTTGGTAATATGTaGATACATTTACCCATGGGG +
Preference number: 2 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNSLGNM*IHLPMG
Trigger: CCCCATGGGTAAATGTATTCACATATTACCAAGAGA...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR GCA 90 bp TGTCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCTGGGTCTTTTTCTGTTaGTTATTGGAAGAATTAGGT +
Preference number: 2 (lower is better)
Translates to: CPFPQMPCTPIPLCLHPCWVFFC*LLEELG
Trigger: ACCTAATTCTTCCAATAAGCAACAGAAAAAGACCCA...GCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR GCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCATGCAGCATTAGAAGGTaGTTACTAAGGTGCTTCGTA +
Preference number: 2 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSCSIRR*LLRCFV
Trigger: TACGAAGCACCTTAGTAAGCACCTTCTAATGCTGCA...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR GCA 90 bp GGTTATACACACTGGCCACAGGAAGTTGCAAAAATTAGATGGACTCTGTGTAGCTCCCAGATTTGGGAGTaGCAGGCTCAGAATCATCAC +
Preference number: 2 (lower is better)
Translates to: GYTHWPQEVAKIRWTLCSSQIWE*QAQNHH
Trigger: GTGATGATTCTGAGCCTGGCACTCCCAAATCTGGGA...GCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR GCA 90 bp GCAGGCAGCATTTGCAACAGCTCCCTTGACAAAGTGGAGGTACTCCTTCAGGAACTTGCAAATAAACTATaGTTCCCAGATTTGGGAGTG +
Preference number: 2 (lower is better)
Translates to: AGSICNSSLDKVEVLLQELANKL*FPDLGV
Trigger: CACTCCCAAATCTGGGAAGCATAGTTTATTTGCAAG...TTCCTGAAGGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR GCA 90 bp CACAAATGCAGAAGATTGAACAGCCCCAGGGAGGCAATTGCTCTCCTTTTATTGCCCCAGGGAGGCAATTaGTCTCCTTTTATTGTAGCT +
Preference number: 2 (lower is better)
Translates to: HKCRRLNSPREAIALLLLPQGGN*SPFIVA
Trigger: AGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGG...CAATAAAAGGAGAGCAATTGCCTCCCTGGGGCTGTTCAATCTTCTGCATTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR GCA 90 bp CTGTGCTGTGTCAATACTAACAGATGTGAGGAGACAGACTATGGAATGGACGCTAGAAAGGCCTCTACTTaGAACTGGCGGATCAAACCA +
Preference number: 2 (lower is better)
Translates to: LCCVNTNRCEETDYGMDARKAST*NWRIKP
Trigger: TGGTTTGATCCGCCAGTTGCAAGTAGAGGCCTTTCT...AGCGTCCATTCCATAGTCTGTCTCCTCACATCTGTTAGTATTGACACAGCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CCA 90 bp AGCACTTATCACTTGTGGTTTGACGGTCTTGATGCATCTCATCTCTTCTTCCAGGAATGCACCCCAAGTTaGGTGAAGCCACTATTGGCA +
Preference number: 2 (lower is better)
Translates to: STYHLWFDGLDASHLFFQECTPS*VKPLLA
Trigger: TGCCAATAGTGGCTTCACCCAACTTGGGGTGCATTC...CTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGATAAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR TCA 90 bp CACAAATGCAGAAGATTGAACAGCCCCAGGGAGGCAATTGCTCTCCTTTTATTGGGAAAACCTCATGACTaGACCACTCACAAATGCAGA +
Preference number: 2 (lower is better)
Translates to: HKCRRLNSPREAIALLLLGKPHD*TTHKCR
Trigger: TCTGCATTTGTGAGTGGTTCAGTCATGAGGTTTTCC...CAATAAAAGGAGAGCAATTGCCTCCCTGGGGCTGTTCAATCTTCTGCATTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR TCA 90 bp TCAGATGTATGCTTGCCTATGAGGCTGGCAGAAGGAAACAAAATTCTCTCTGGAAATGCTTCTCTGCACTaGTGGTGGCACCTGATATAC +
Preference number: 2 (lower is better)
Translates to: SDVCLPMRLAEGNKILSGNASLH*WWHLIY
Trigger: GTATATCAGGTGCCACCATCAGTGCAGAGAAGCATT...TCCAGAGAGAATTTTGTTTCCTTCTGCCAGCCTCATAGGCAAGCATACATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR GCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTCAGGATGTCTCCCTTaGGAAAGGCCAGTTCCTCGG +
Preference number: 2 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSSGCLP*ERPVPR
Trigger: CCGAGGAACTGGCCTTTCGCAAGGGAGACATCCTGA...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR GCA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGGCCCATTCTTCAGATaGAAGCTGCCAGGGCCGGGT +
Preference number: 2 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGGPFFR*KLPGPG
Trigger: ACCCGGCCCTGGCAGCTTGCATCTGAAGAATGGGCC...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp CACATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATTATGCTTCCCAGATTTaGGAGTGCCAGGCTCAGAAT +
Preference number: 2 (lower is better)
Translates to: HIYILKFAPQEGFWALGHYASQI*ECQAQN
Trigger: ATTCTGAGCCTGGCACTCCCAAATCTGGGAAGCATA...ATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CCA 90 bp CTGTGCTGTGTCAATACTAACAGATGTGAGGAGACAGACTATGGAATGGACGCTAGGGGTTATACACACTaGCCACAGGAAGTTGCAAAA +
Preference number: 2 (lower is better)
Translates to: LCCVNTNRCEETDYGMDARGYTH*PQEVAK
Trigger: TTTTGCAACTTCCTGTGGCCAGTGTGTATAACCCCT...AGCGTCCATTCCATAGTCTGTCTCCTCACATCTGTTAGTATTGACACAGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CCA 90 bp TCTCCACTTAGCGTAGATCAATCAAGTCAGCCATCTCCTAAGAAATACACATTAAGGAGGTGGAAGACGTaGACATGTTACTCCGGGTGC +
Preference number: 2 (lower is better)
Translates to: SPLSVDQSSQPSPKKYTLRRWKT*TCYSGC
Trigger: GCACCCGGAGTAACATGTCCACGTCTTCCACCTCCT...TAATGTGTATTTCTTAGGAGATGGCTGACTTGATTGATCTACGCTAAGTGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR TCA 90 bp AGCACTTATCACTTGTGGTTTGACGGTCTTGATGCATCTCATCTCTTCTTCCAGAGCTCGTATGTGACATaGACACCTGGGTTCTTCTTA +
Preference number: 2 (lower is better)
Translates to: STYHLWFDGLDASHLFFQSSYVT*TPGFFL
Trigger: TAAGAAGAACCCAGGTGTTCATGTCACATACGAGCT...CTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGATAAGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR TCA 90 bp TCTCCACTTAGCGTAGATCAATCAAGTCAGCCATCTCCTAAGAAATACACATTACTGTGTTCTGCTCTATaGCGGTCAGGATGTCTCCCT +
Preference number: 2 (lower is better)
Translates to: SPLSVDQSSQPSPKKYTLLCSAL*RSGCLP
Trigger: AGGGAGACATCCTGACCGTCATAGAGCAGAACACAG...TAATGTGTATTTCTTAGGAGATGGCTGACTTGATTGATCTACGCTAAGTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR GCA 90 bp AGCACTTATCACTTGTGGTTTGACGGTCTTGATGCATCTCATCTCTTCTTCCAGGAAACTGTAGAAGAATaGACCCCAAGTTGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: STYHLWFDGLDASHLFFQETVEE*TPSWVK
Trigger: CTTCACCCAACTTGGGGTGCATTCTTCTACAGTTTC...CTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGATAAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAGAATACATTTACCCATaGGGTAGAAGTATTTCACCT +
Preference number: 2 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSEYIYP*GRSISP
Trigger: AGGTGAAATACTTCTACCCCATGGGTAAATGTATTC...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR TCA 90 bp GGAATTCAGGGGACAAGACAACAGGAACAAGACAAGCAACAGTCAATTCTTGCTAGATCTACGAGGCAGTaGGAATTTCAAACCAAAGCA +
Preference number: 2 (lower is better)
Translates to: GIQGTRQQEQDKQQSILARSTRQ*EFQTKA
Trigger: TGCTTTGGTTTGAAATTCTCACTGCCTCGTAGATCT...AGCAAGAATTGACTGTTGCTTGTCTTGTTCCTGTTGTCTTGTCCCCTGAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR TCA 90 bp ATCACTTGTGGTTTGACGGTCTTGATGCATCTCATCTCTTCTTCCAGCATTTTATTAAGCAAGATGGCGTaGGGTCTGCCACTACAGAAT +
Preference number: 2 (lower is better)
Translates to: ITCGLTVLMHLISSSSILLSKMA*GLPLQN
Trigger: ATTCTGTAGTGGCAGACCTCACGCCATCTTGCTTAA...TAAAATGCTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR GCA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGAGGTGCTTACTAAGGTaGTTCGTAATTCATGGTTTT +
Preference number: 2 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKRCLLR*FVIHGF
Trigger: AAAACCATGAATTACGAAGCACCTTAGTAAGCACCT...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR GCA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGATATATTCTGAAATTTaGTCCGCAAGAGGGCTTTTG +
Preference number: 2 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLIYSEI*SARGLL
Trigger: CAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATAT...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CCA 90 bp GCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAAGCATACAAAAGCACGTaGACAAGTTTTCTGTACAGT +
Preference number: 2 (lower is better)
Translates to: APGRQLLSFYCSCLSVLKAYKST*TSFLYS
Trigger: ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC...TTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CCA 90 bp CTGTGCTGTGTCAATACTAACAGATGTGAGGAGACAGACTATGGAATGGACGCTGCATACAAAAGCACGTaGACAAGTTTTCTGTACAGT +
Preference number: 2 (lower is better)
Translates to: LCCVNTNRCEETDYGMDAAYKST*TSFLYS
Trigger: ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC...AGCGTCCATTCCATAGTCTGTCTCCTCACATCTGTTAGTATTGACACAGCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCACTTTTAATCTTCTTTTaGCAGAGTAGGACTTTGAGA +
Preference number: 2 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSLLIFF*QSRTLR
Trigger: TCTCAAAGTCCTACTCTGCCAAAAGAAGATTAAAAG...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CCA 90 bp TTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAATACTTTTAATCTTCTTTTaGCAGAGTAGGACTTTGAGA +
Preference number: 2 (lower is better)
Translates to: FTCPMKNLMACGVCAVSILLIFF*QSRTLR
Trigger: TCTCAAAGTCCTACTCTGCCAAAAGAAGATTAAAAG...TATTGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CCA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTTACTTTTTACCCACGTaGGGCCCACTGGTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGYFLPT*GPLVPP
Trigger: TGGGGGAACCAGTGGGCCCCACGTGGGTAAAAAGTA...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR TCA 90 bp TCTCCACTTAGCGTAGATCAATCAAGTCAGCCATCTCCTAAGAAATACACATTAAGCTCTATAGTTCCATaGTCAAGGACCTGGCCAGTT +
Preference number: 2 (lower is better)
Translates to: SPLSVDQSSQPSPKKYTLSSIVP*SRTWPV
Trigger: AACTGGCCAGGTCCTTGATCATGGAACTATAGAGCT...TAATGTGTATTTCTTAGGAGATGGCTGACTTGATTGATCTACGCTAAGTGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR GCA 90 bp GGTTATACACACTGGCCACAGGAAGTTGCAAAAATTAGATGGACTCTGTGTAGCCTTGCAAATAAACTATaGTTCCCAGATTTGGGAGTG +
Preference number: 2 (lower is better)
Translates to: GYTHWPQEVAKIRWTLCSLANKL*FPDLGV
Trigger: CACTCCCAAATCTGGGAAGCATAGTTTATTTGCAAG...GCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR GCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGTATTCAGGGACCAGCTaGACTCATTTAAGTCATGGC +
Preference number: 2 (lower is better)
Translates to: NYQSLDPHIYSEICSARGYSGTS*THLSHG
Trigger: GCCATGACTTAAATGAGTGCAGCTGGTCCCTGAATA...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp AGCACTTATCACTTGTGGTTTGACGGTCTTGATGCATCTCATCTCTTCTTCCAGAATGGTAAGAGACAGTaGTCCTTGATGATCATCTGT +
Preference number: 2 (lower is better)
Translates to: STYHLWFDGLDASHLFFQNGKRQ*SLMIIC
Trigger: ACAGATGATCATCAAGGACCACTGTCTCTTACCATT...CTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGATAAGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CCA 90 bp GGTTATACACACTGGCCACAGGAAGTTGCAAAAATTAGATGGACTCTGTGTAGCACAAACATGAATACATaGGCATACAAAAGCACGTGG +
Preference number: 2 (lower is better)
Translates to: GYTHWPQEVAKIRWTLCSTNMNT*AYKSTW
Trigger: CCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT...GCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CCA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCAGGGGTTATACACACTaGCCACAGGAAGTTGCAAAA +
Preference number: 2 (lower is better)
Translates to: LLVICEYIYPWGRSISPARGYTH*PQEVAK
Trigger: TTTTGCAACTTCCTGTGGCCAGTGTGTATAACCCCT...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR TCA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCGCTGTCTCTCAGTATTaGAACAACCCAATCCTAACT +
Preference number: 2 (lower is better)
Translates to: LLVICEYIYPWGRSISPAAVSQY*NNPILT
Trigger: AGTTAGGATTGGGTTGTTTCAATACTGAGAGACAGC...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR TCA 90 bp GGTTATACACACTGGCCACAGGAAGTTGCAAAAATTAGATGGACTCTGTGTAGCGTAGTAGCACCAAAGTaGATATTAAGAGTCAGAAAG +
Preference number: 2 (lower is better)
Translates to: GYTHWPQEVAKIRWTLCSVVAPK*ILRVRK
Trigger: CTTTCTGACTCTTAATATTCACTTTGGTGCTACTAC...GCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR GCA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCAGAGGCAGGCAGCATTTaGAACAGCTCCCTTGACAAA +
Preference number: 2 (lower is better)
Translates to: LLLLVICEYIYPWGRSISEAGSI*NSSLDK
Trigger: TTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGCCTC...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp ATCACTTGTGGTTTGACGGTCTTGATGCATCTCATCTCTTCTTCCAGCATTTTATTTCTACAGCTTCTTTaGGTAAGGGGGAACATTGGA +
Preference number: 2 (lower is better)
Translates to: ITCGLTVLMHLISSSSILFLQLL*VRGNIG
Trigger: TCCAATGTTCCCCCTTACCCAAAGAAGCTGTAGAAA...TAAAATGCTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CCA 90 bp CAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGAACACTTGCAAATTTTGGTAGGAAGGTaGCACTTGGTAGATGGTGTC +
Preference number: 2 (lower is better)
Translates to: QTRISHAMPHDLEGEHLQILVGR*HLVDGV
Trigger: GACACCATCTACCAAGTGCCACCTTCCTACCAAAAT...TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR GCA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTAGAAAGGCCTCTACTTaGAACTGGCGGATCAAACCA +
Preference number: 2 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGRKAST*NWRIKP
Trigger: TGGTTTGATCCGCCAGTTGCAAGTAGAGGCCTTTCT...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR GCA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGACACAACTGAAGAGTaGGTCAATGGCGTTGAGAAG +
Preference number: 2 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGDTTEE*VNGVEK
Trigger: CTTCTCAACGCCATTGACGCACTCTTCAGTTGTGTC...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CCA 90 bp GGAATTCAGGGGACAAGACAACAGGAACAAGACAAGCAACAGTCAATTCTTGCTTGTTCGTATCAGTATTaGCATTATTACGGTTATCAC +
Preference number: 2 (lower is better)
Translates to: GIQGTRQQEQDKQQSILACSYQY*HYYGYH
Trigger: GTGATAACCGTAATAATGCCAATACTGATACGAACA...AGCAAGAATTGACTGTTGCTTGTCTTGTTCCTGTTGTCTTGTCCCCTGAATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR TCA 90 bp AGGGGACAAGACAACAGGAACAAGACAAGCAACAGTCAATTCTTGCTTTCTAATTCCAAGTCTAGGAGATaGAGATATTTATCCAAGAGA +
Preference number: 2 (lower is better)
Translates to: RGQDNRNKTSNSQFLLSNSKSRR*RYLSKR
Trigger: TCTCTTGGATAAATATCTTCATCTCCTAGACTTGGA...ATTAGAAAGCAAGAATTGACTGTTGCTTGTCTTGTTCCTGTTGTCTTGTCCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR TCA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCCTGTGCGTATTTCATTaGTGTGTCTTTCCATATATC +
Preference number: 2 (lower is better)
Translates to: LLVICEYIYPWGRSISPALCVFH*CVFPYI
Trigger: GATATATGGAAAGACACATCAATGAAATACGCACAG...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR GCA 90 bp TCTCCACTTAGCGTAGATCAATCAAGTCAGCCATCTCCTAAGAAATACACATTACTTGCAAATAAACTATaGTTCCCAGATTTGGGAGTG +
Preference number: 2 (lower is better)
Translates to: SPLSVDQSSQPSPKKYTLLANKL*FPDLGV
Trigger: CACTCCCAAATCTGGGAAGCATAGTTTATTTGCAAG...TAATGTGTATTTCTTAGGAGATGGCTGACTTGATTGATCTACGCTAAGTGGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGGAATACATTTACCCATaGGGTAGAAGTATTTCACCT +
Preference number: 2 (lower is better)
Translates to: NYQSLDPHIYSEICSARGEYIYP*GRSISP
Trigger: AGGTGAAATACTTCTACCCCATGGGTAAATGTATTC...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CCA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTACAAACATGAATACATaGGCATACAAAAGCACGTGG +
Preference number: 2 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFTNMNT*AYKSTW
Trigger: CCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR TCA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCATCCACATATATATTCTaGAATTTGCTCCGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: LLLLVICEYIYPWGRSISSTYIF*NLLRKR
Trigger: CCTCTTGCGGAGCAAATTTCAGAATATATATGTGGA...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR TCA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCAGTAGTAGCACCAAAGTaGATATTAAGAGTCAGAAAG +
Preference number: 2 (lower is better)
Translates to: LLLLVICEYIYPWGRSISVVAPK*ILRVRK
Trigger: CTTTCTGACTCTTAATATTCACTTTGGTGCTACTAC...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR CCA 72 bp TGCTCCTTGCTCAGGCCTGGGGGCAGTGCCTTGTTGTaGGCCTGGGCCTTGTGGTCACCAGGATGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: CSLLRPGGSALL*AWALWSPGCSS
Trigger: GCTGCTGCATCCTGGTGACCACAAGGCCCAGGCCCACAACAAGGCACTGCCCCCAGGCCTGAGCAAGGAGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 72 bp AGGCAGGCTGCTCGTGACTGGAGGCAGTCTCCTGCATaGGACCAATCAGAAGCTTCACCCGGTTGCCTGGGA +
Preference number: 3 (lower is better)
Translates to: RQAARDWRQSPA*DQSEASPGCLG
Trigger: TCCCAGGCAACCGGGTGAAGCTTCTGATTGGTCCCATGCAGGAGACTGCCTCCAGTCACGAGCAGCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 72 bp GGTCTGTCACTTGGTGCACCATTTCCTGCAGGGCCGTaGTGCTGGGGTAATGGAGGGCGGCCATCTTGGTTG +
Preference number: 3 (lower is better)
Translates to: GLSLGAPFPAGP*CWGNGGRPSWL
Trigger: CAACCAAGATGGCCGCCCTCCATTACCCCAGCACCACGGCCCTGCAGGAAATGGTGCACCAAGTGACAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp GTTGCGGGGGTGGGTGATTCGGGGACAGGCTCTGGTGCCTTCGAGCCACCGGTTCTGAAGACATCAGGGTaGCCAGAACAGCTCAAAGCA +
Preference number: 3 (lower is better)
Translates to: VAGVGDSGTGSGAFEPPVLKTSG*PEQLKA
Trigger: TGCTTTGAGCTGTTCTGGCAACCCTGATGTCTTCAG...AACCGGTGGCTCGAAGGCACCAGAGCCTGTCCCCGAATCACCCACCCCCGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 72 bp CGTGGTGCTGGGGTAATGGAGGGCGGCCATCTTGGTTaGCATGACTATGGTCTTGAGCTGCTCGCAGAGCTG +
Preference number: 3 (lower is better)
Translates to: RGAGVMEGGHLG*HDYGLELLAEL
Trigger: CAGCTCTGCGAGCAGCTCAAGACCATAGTCATGGCAACCAAGATGGCCGCCCTCCATTACCCCAGCACCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 72 bp CCTGGGAGCCACCGTGTGGGTACTCCGTTGAGTTCATaGTGCTCTCCGGCCCATTCTTCAGATGCAAGCTGC +
Preference number: 3 (lower is better)
Translates to: PGSHRVGTPLSS*CSPAHSSDASC
Trigger: GCAGCTTGCATCTGAAGAATGGGCCGGAGAGCATCATGAACTCAACGGAGTACCCACACGGTGGCTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 72 bp CAGCTGTCCCTGGGAGCCACCGTGTGGGTACTCCGTTaGGTTCATGATGCTCTCCGGCCCATTCTTCAGATG +
Preference number: 3 (lower is better)
Translates to: QLSLGATVWVLR*VHDALRPILQM
Trigger: CATCTGAAGAATGGGCCGGAGAGCATCATGAACTCAACGGAGTACCCACACGGTGGCTCCCAGGGACAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 72 bp GTTGAGTTCATGATGCTCTCCGGCCCATTCTTCAGATaGAAGCTGCCAGGGCCGGGTCTGAAGAGGGCCTCT +
Preference number: 3 (lower is better)
Translates to: VEFMMLSGPFFR*KLPGPGLKRAS
Trigger: AGAGGCCCTCTTCAGACCCGGCCCTGGCAGCTTGCATCTGAAGAATGGGCCGGAGAGCATCATGAACTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 72 bp GCAACTGCCGATCCTGAGCACTCACGCCACTGTTTGTaGTGGGTAGGCTCTGAGAGGGCTTCCACTTCGAGA +
Preference number: 3 (lower is better)
Translates to: ATADPEHSRHCL*WVGSERASTSR
Trigger: TCTCGAAGTGGAAGCCCTCTCAGAGCCTACCCACCACAAACAGTGGCGTGAGTGCTCAGGATCGGCAGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp CGCGGGGGCTGGGCTGAGCTGACACAACTGAAGAGTGCGTCAATGGCGTTGAGATTTGCAACAGCTCCCTaGACAAAGTGGAGGTACTCC +
Preference number: 3 (lower is better)
Translates to: RGGWAELTQLKSASMALRFATAP*TKWRYS
Trigger: GGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAAA...TCTCAACGCCATTGACGCACTCTTCAGTTGTGTCAGCTCAGCCCAGCCCCCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 72 bp CTGGAGACACCCATCTCAAGGGCCTGCTGGAGCCGCTaGAGTCTCTCAATAGCTGTGTCTGGATCCAGGAAG +
Preference number: 3 (lower is better)
Translates to: LETPISRACWSR*SLSIAVSGSRK
Trigger: CTTCCTGGATCCAGACACAGCTATTGAGAGACTTCAGCGGCTCCAGCAGGCCCTTGAGATGGGTGTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 72 bp CTCGTTGCAGCTCCCGCTTCATCTTGTTGTGGAGGATaGGTTCCGGGAGGCAGGCAGCATTTGCAACAGCTC +
Preference number: 3 (lower is better)
Translates to: LVAAPASSCCGG*VPGGRQHLQQL
Trigger: GAGCTGTTGCAAATGCTGCCTGCCTCCCGGAACTCATCCTCCACAACAAGATGAAGCGGGAGCTGCAACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 72 bp CGGCGAGAACTGAGCTGTCCATTTCCACAGATGCCCTaGACGCCCATACCTCTGTGCCTTCATCCATGCCAT +
Preference number: 3 (lower is better)
Translates to: RRELSCPFPQMP*TPIPLCLHPCH
Trigger: ATGGCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGACAGCTCAGTTCTCGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR GCA 72 bp ATCAGAAGCTTCACCCGGTTGCCTGGGACAATGCCTTaGCGACCGTGTAATGAGCACAGCCACCATCCTTCC +
Preference number: 3 (lower is better)
Translates to: IRSFTRLPGTMP*RPCNEHSHHPS
Trigger: GGAAGGATGGTGGCTGTGCTCATTACACGGTCGGCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 72 bp GACCAATCAGAAGCTTCACCCGGTTGCCTGGGACAATaGCTTGCCGACCGTGTAATGAGCACAGCCACCATC +
Preference number: 3 (lower is better)
Translates to: DQSEASPGCLGQ*LADRVMSTATI
Trigger: GATGGTGGCTGTGCTCATTACACGGTCGGCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTCTGATTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 72 bp TCTCCTGCATGGGACCAATCAGAAGCTTCACCCGGTTaGCTGGGACAATGCCTTGCCGACCGTGTAATGAGC +
Preference number: 3 (lower is better)
Translates to: SPAWDQSEASPG*LGQCLADRVMS
Trigger: GCTCATTACACGGTCGGCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTCTGATTGGTCCCATGCAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 72 bp TGTGGTGAGCTGCTTGGCGTCATCGGGCACCGTCTTTaGCACCATCACAAACCGGTCCAGATCGTCACACTT +
Preference number: 3 (lower is better)
Translates to: CGELLGVIGHRL*HHHKPVQIVTL
Trigger: AAGTGTGACGATCTGGACCGGTTTGTGATGGTGGCAAAGACGGTGCCCGATGACGCCAAGCAGCTCACCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 72 bp ACTGCCGATCCTGAGCACTCACGCCACTGTTTGTGGTaGGTAGGCTCTGAGAGGGCTTCCACTTCGAGATGT +
Preference number: 3 (lower is better)
Translates to: TADPEHSRHCLW*VGSERASTSRC
Trigger: ACATCTCGAAGTGGAAGCCCTCTCAGAGCCTACCCACCACAAACAGTGGCGTGAGTGCTCAGGATCGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp GCTGCCTGTACTGGAGAAAGACAATCGGTTGATCCCATCCACCAAGTCCCGAGAAGAAGCTTCACCCGGTaGCCTGGGACAATGCCTTGC +
Preference number: 3 (lower is better)
Translates to: AACTGERQSVDPIHQVPRRSFTR*PGTMPC
Trigger: GCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTCT...TCTCGGGACTTGGTGGATGGGATCAACCGATTGTCTTTCTCCAGTACAGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp CAGTCGGTAGTGACCAGTGCCATTAGGCTGGAGACACCCATCTCAAGGGCCTGCGTGGCCAGTGGGGACTaGGTAAATTCCCTGATTTTG +
Preference number: 3 (lower is better)
Translates to: QSVVTSAIRLETPISRACVASGD*VNSLIL
Trigger: CAAAATCAGGGAATTTACCAAGTCCCCACTGGCCAC...GCAGGCCCTTGAGATGGGTGTCTCCAGCCTAATGGCACTGGTCACTACCGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp CATGACTATGGTCTTGAGCTGCTCGCAGAGCTGGTTGCTGGAGTTCATGACTTTGTTGTGGTGAGCTGCTaGGCGTCATCGGGCACCGTC +
Preference number: 3 (lower is better)
Translates to: HDYGLELLAELVAGVHDFVVVSC*ASSGTV
Trigger: GACGGTGCCCGATGACGCCAAGCAGCTCACCACAAC...AAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCAGCTCAAGACCATAGTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 72 bp GTTCCCCCAATGCTTCTCTGCACTGATGGTGGCACCTaGTATACCTCTTGTTCTTGGGTGCCGTGGCCAGTG +
Preference number: 3 (lower is better)
Translates to: VPPMLLCTDGGT*YTSCSWVPWPV
Trigger: CACTGGCCACGGCACCCAAGAACAAGAGGTATATCAGGTGCCACCATCAGTGCAGAGAAGCATTGGGGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 72 bp ATAGCTGTGTCTGGATCCAGGAAGAGCCTTTTGTCCTaGGCTGGGGAGGCTGACAGTGAGGACTCCTTGGAG +
Preference number: 3 (lower is better)
Translates to: IAVSGSRKSLLS*AGEADSEDSLE
Trigger: CTCCAAGGAGTCCTCACTGTCAGCCTCCCCAGCTCAGGACAAAAGGCTCTTCCTGGATCCAGACACAGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 72 bp TACATGAAGGTCCTTCCCTGCTGGCTTGGTGCAGGTTaGAGGAATGTCATAAACCCCCTCCGGTCTGAGGTC +
Preference number: 3 (lower is better)
Translates to: YMKVLPCWLGAG*RNVINPLRSEV
Trigger: GACCTCAGACCGGAGGGGGTTTATGACATTCCTCCAACCTGCACCAAGCCAGCAGGGAAGGACCTTCATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 72 bp ACAAACTTGCTGTGTGCCACGAAGATTCGCGGGGGCTaGGCTGAGCTGACACAACTGAAGAGTGCGTCAATG +
Preference number: 3 (lower is better)
Translates to: TNLLCATKIRGG*AELTQLKSASM
Trigger: CATTGACGCACTCTTCAGTTGTGTCAGCTCAGCCCAGCCCCCGCGAATCTTCGTGGCACACAGCAAGTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 72 bp TTGAACAGCTGGGCATTTCTAGAAAGGTCTGTCACTTaGTGCACCATTTCCTGCAGGGCCGTGGTGCTGGGG +
Preference number: 3 (lower is better)
Translates to: LNSWAFLERSVT*CTISCRAVVLG
Trigger: CCCCAGCACCACGGCCCTGCAGGAAATGGTGCACCAAGTGACAGACCTTTCTAGAAATGCCCAGCTGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp GCAGGCAGCATTTGCAACAGCTCCCTTGACAAAGTGGAGGTACTCCTTCAGGAAGTAGGAAGGTGGCACTaGGTAGATGGTGTCTCGGGG +
Preference number: 3 (lower is better)
Translates to: AGSICNSSLDKVEVLLQEVGRWH*VDGVSG
Trigger: CCCCGAGACACCATCTACCAAGTGCCACCTTCCTAC...TTCCTGAAGGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 72 bp GTTGTGGAGGATGAGTTCCGGGAGGCAGGCAGCATTTaGAACAGCTCCCTTGACAAAGTGGAGGTACTCCTT +
Preference number: 3 (lower is better)
Translates to: VVEDEFREAGSI*NSSLDKVEVLL
Trigger: AAGGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGCCTCCCGGAACTCATCCTCCACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 72 bp GCGGCCATCTTGGTTGCCATGACTATGGTCTTGAGCTaGTCGCAGAGCTGGTTGCTGGAGTTCATGACTTTG +
Preference number: 3 (lower is better)
Translates to: AAILVAMTMVLS*SQSWLLEFMTL
Trigger: CAAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCAGCTCAAGACCATAGTCATGGCAACCAAGATGGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 72 bp TTGGTAGATGGTGTCTCGGGGAGCAGCCTGTGGGTTTaGCACTTGATAGAGCTTCTGTTGGCCAAAGGTCTG +
Preference number: 3 (lower is better)
Translates to: LVDGVSGSSLWV*HLIELLLAKGL
Trigger: CAGACCTTTGGCCAACAGAAGCTCTATCAAGTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 72 bp TGGCACTTGGTAGATGGTGTCTCGGGGAGCAGCCTGTaGGTTTGGCACTTGATAGAGCTTCTGTTGGCCAAA +
Preference number: 3 (lower is better)
Translates to: WHLVDGVSGSSL*VWHLIELLLAK
Trigger: TTTGGCCAACAGAAGCTCTATCAAGTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 72 bp TTCCCTGATTTTGGTAGGAAGGTGGCACTTGGTAGATaGTGTCTCGGGGAGCAGCCTGTGGGTTTGGCACTT +
Preference number: 3 (lower is better)
Translates to: FPDFGRKVALGR*CLGEQPVGLAL
Trigger: AAGTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAGTGCCACCTTCCTACCAAAATCAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 72 bp TGGTTGCTGGAGTTCATGACTTTGTTGCGAATGTCCTaGGCAGTCACCTGCCGTGTCAGCGTGTCTCCAATG +
Preference number: 3 (lower is better)
Translates to: WLLEFMTLLRMS*AVTCRVSVSPM
Trigger: CATTGGAGACACGCTGACACGGCAGGTGACTGCCCAGGACATTCGCAACAAAGTCATGAACTCCAGCAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp CTGAATGCCTTTCCCCCACCAAGCCCTTCCCAAACAGATAATATGTCTCTATCCTGGGTGAAGCCACTATaGGCAGGCAAGGAGGGCTGC +
Preference number: 3 (lower is better)
Translates to: LNAFPPPSPSQTDNMSLSWVKPL*AGKEGC
Trigger: GCAGCCCTCCTTGCCTGCCAATAGTGGCTTCACCCA...GGATAGAGACATATTATCTGTTTGGGAAGGGCTTGGTGGGGGAAAGGCATTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CAA 90 bp ATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGATATACCTCTTGTTCTaGGGTGCCGTGGCCAGTGGG +
Preference number: 3 (lower is better)
Translates to: MIKDLASFPQVMGVVAPKIYLLF*GAVASG
Trigger: CCCACTGGCCACGGCACCCAAGAACAAGAGGTATAT...CTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAGCCATGACTATGGTCTaGAGCTGCTCGCAGAGCTGG +
Preference number: 3 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSAMTMV*SCSQSW
Trigger: CCAGCTCTGCGAGCAGCTCAAGACCATAGTCATGGC...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 72 bp ACCGGTCCAGATCGTCACACTTGTTCTGGGGCTTGTTaGTGGCCAAGATATTCAGGGACCAGCTGCACTCAT +
Preference number: 3 (lower is better)
Translates to: TGPDRHTCSGAC*WPRYSGTSCTH
Trigger: ATGAGTGCAGCTGGTCCCTGAATATCTTGGCCATCAACAAGCCCCAGAACAAGTGTGACGATCTGGACCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 72 bp CATGGGATATGGGGCAGAACAGTGCCCTATCAGCCATaGATGGTAGTGTTGGGCAAGAGAGGGATCCAAGAA +
Preference number: 3 (lower is better)
Translates to: HGIWGRTVPYQP*MVVLGKRGIQE
Trigger: TTCTTGGATCCCTCTCTTGCCCAACACTACCATGCATGGCTGATAGGGCACTGTTCTGCCCCATATCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR GCA 72 bp CTGATGGTGGCACCTGATATACCTCTTGTTCTTGGGTaGCGTGGCCAGTGGGGACTTGGTAAATTCCCTGAT +
Preference number: 3 (lower is better)
Translates to: LMVAPDIPLVLG*RGQWGLGKFPD
Trigger: ATCAGGGAATTTACCAAGTCCCCACTGGCCACGGCACCCAAGAACAAGAGGTATATCAGGTGCCACCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 72 bp GATCCCATCCACCAAGTCCCGAGAGCCTTTAGCATCTaGCGGGTTATGCAGAGGGACATCATAAACACCATC +
Preference number: 3 (lower is better)
Translates to: DPIHQVPRAFSI*RVMQRDIINTI
Trigger: GATGGTGTTTATGATGTCCCTCTGCATAACCCGCCAGATGCTAAAGGCTCTCGGGACTTGGTGGATGGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp TGTCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCTTAATAGAGGTGAGATaGCTTTTCAAGCCTGGGGGC +
Preference number: 3 (lower is better)
Translates to: CPFPQMPCTPIPLCLHPCLIEVR*LFKPGG
Trigger: GCCCCCAGGCTTGAAAAGCAATCTCACCTCTATTAA...GCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CAA 90 bp AACAGTGCCCTATCAGCCATGCATGGTAGTGTTGGGCAAGAGAGGGATCCAAGAAGAATGCACCCCAAGTaGGGTGAAGCCACTATTGGC +
Preference number: 3 (lower is better)
Translates to: NSALSAMHGSVGQERDPRRMHPK*GEATIG
Trigger: GCCAATAGTGGCTTCACCCAACTTGGGGTGCATTCT...TCTTGGATCCCTCTCTTGCCCAACACTACCATGCATGGCTGATAGGGCACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CAA 90 bp CTAAGCCCTGCTTCATCCCGGCAAGCAGAGGGCGGAATGGCATATACCCCTTTTAGGGCTTTTGGGCACTaGGCCATCATGTGTTTAAGA +
Preference number: 3 (lower is better)
Translates to: LSPASSRQAEGGMAYTPFRAFGH*AIMCLR
Trigger: TCTTAAACACATGATGGCCAAGTGCCCAAAAGCCCT...AAAAGGGGTATATGCCATTCCGCCCTCTGCTTGCCGGGATGAAGCAGGGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATGAAGAACCTGATGGCTaGTGGTGTCTGTGCTGTGTC +
Preference number: 3 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNEEPDG*WCLCCV
Trigger: GACACAGCACAGACACCACAAGCCATCAGGTTCTTC...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CAA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCATCCCGCTTCATCTTGTaGTGGAGGATGAGTTCCGGG +
Preference number: 3 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSSRFIL*WRMSSG
Trigger: CCCGGAACTCATCCTCCACAACAAGATGAAGCGGGA...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp AACAGTGCCCTATCAGCCATGCATGGTAGTGTTGGGCAAGAGAGGGATCCAAGACTGAAGACATCAGGGTaGCCAGAACAGCTCAAAGCA +
Preference number: 3 (lower is better)
Translates to: NSALSAMHGSVGQERDPRLKTSG*PEQLKA
Trigger: TGCTTTGAGCTGTTCTGGCAACCCTGATGTCTTCAG...TCTTGGATCCCTCTCTTGCCCAACACTACCATGCATGGCTGATAGGGCACTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CAA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTATGCTTCCCAGATTaGGGAGTGCCAGGCTCAGAA +
Preference number: 3 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCLCFPD*GVPGSE
Trigger: TTCTGAGCCTGGCACTCCCAAATCTGGGAAGCATAG...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CAA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAGAAGAACCTGATGGCTaGTGGTGTCTGTGCTGTGTC +
Preference number: 3 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSEEPDG*WCLCCV
Trigger: GACACAGCACAGACACCACAAGCCATCAGGTTCTTC...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR TCA 72 bp AGGGACCAGCTGCACTCATTTAAGTCATGGCTGGTTTaGCTCAGGATCTGGTGGGAGTCTTCAACTCGTTGC +
Preference number: 3 (lower is better)
Translates to: RDQLHSFKSWLV*LRIWWESSTRC
Trigger: GCAACGAGTTGAAGACTCCCACCAGATCCTGAGTCAAACCAGCCATGACTTAAATGAGTGCAGCTGGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 72 bp TGTATTTTACATGAAGGTCCTTCCCTGCTGGCTTGGTaGAGGTTGGAGGAATGTCATAAACCCCCTCCGGTC +
Preference number: 3 (lower is better)
Translates to: CILHEGPSLLAW*RLEECHKPPPV
Trigger: GACCGGAGGGGGTTTATGACATTCCTCCAACCTGCACCAAGCCAGCAGGGAAGGACCTTCATGTAAAATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 72 bp ACCATCACAAACCGGTCCAGATCGTCACACTTGTTCTaGGGCTTGTTGATGGCCAAGATATTCAGGGACCAG +
Preference number: 3 (lower is better)
Translates to: TITNRSRSSHLF*GLLMAKIFRDQ
Trigger: CTGGTCCCTGAATATCTTGGCCATCAACAAGCCCCAGAACAAGTGTGACGATCTGGACCGGTTTGTGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 72 bp GTTGCCATGACTATGGTCTTGAGCTGCTCGCAGAGCTaGTTGCTGGAGTTCATGACTTTGTTGCGAATGTCC +
Preference number: 3 (lower is better)
Translates to: VAMTMVLSCSQS*LLEFMTLLRMS
Trigger: GGACATTCGCAACAAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCAGCTCAAGACCATAGTCATGGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 72 bp AACGTTGCCATCTCCAGCAAAGAGCGCTTGAACAGCTaGGCATTTCTAGAAAGGTCTGTCACTTGGTGCACC +
Preference number: 3 (lower is better)
Translates to: NVAISSKERLNS*AFLERSVTWCT
Trigger: GGTGCACCAAGTGACAGACCTTTCTAGAAATGCCCAGCTGTTCAAGCGCTCTTTGCTGGAGATGGCAACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp TGTCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCTCATCTGTAGAGTTCTaGGGGTTACTGTTTTCTGCT +
Preference number: 3 (lower is better)
Translates to: CPFPQMPCTPIPLCLHPCSSVEF*GLLFSA
Trigger: AGCAGAAAACAGTAACCCCAAGAACTCTACAGATGA...GCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CAA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTCAGAAAGGCCTCTACTaGCAACTGGCGGATCAAACC +
Preference number: 3 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVQKGLY*QLADQT
Trigger: GGTTTGATCCGCCAGTTGCAAGTAGAGGCCTTTCTG...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CAA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGCTGTGGGTTTGGCACTaGATAGAGCTTCTGTTGGCC +
Preference number: 3 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLLWVWH*IELLLA
Trigger: GGCCAACAGAAGCTCTATCAAGTGCCAAACCCACAG...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp GAGGGATATCATAGACGTCCTTTTGGTATCTGGATGGGTACTCGTATACGTAGCCACCTGATATACCTCTaGTTCTTGGGTGCCGTGGCC +
Preference number: 3 (lower is better)
Translates to: EGYHRRPFGIWMGTRIRSHLIYL*FLGAVA
Trigger: GGCCACGGCACCCAAGAACAAGAGGTATATCAGGTG...GCTACGTATACGAGTACCCATCCAGATACCAAAAGGACGTCTATGATATCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp CATGACTATGGTCTTGAGCTGCTCGCAGAGCTGGTTGCTGGAGTTCATGACTTTGATGTCGTATACCCCTaGAGTGGTATGAGAAGGAGG +
Preference number: 3 (lower is better)
Translates to: HDYGLELLAELVAGVHDFDVVYP*SGMRRR
Trigger: CCTCCTTCTCATACCACTCAAGGGGTATACGACATC...AAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCAGCTCAAGACCATAGTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 72 bp GGAGACAGACTATGGAATGGACGCTGTGACTATCTGTaGGATAGTGGAAGGGGTTATACACACTGGCCACAG +
Preference number: 3 (lower is better)
Translates to: GDRLWNGRCDYL*DSGRGYTHWPQ
Trigger: CTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR GCA 72 bp CTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTaGTGTGTCAATACTAACAGATGTGAGGAGACAGAC +
Preference number: 3 (lower is better)
Translates to: LPHEEPDGLWCL*CVNTNRCEETD
Trigger: GTCTGTCTCCTCACATCTGTTAGTATTGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR CCA 72 bp CCTGATATACCTCTTGTTCTTGGGTGCCGTGGCCAGTaGGGACTTGGTAAATTCCCTGATTTTGGTAGGAAG +
Preference number: 3 (lower is better)
Translates to: PDIPLVLGCRGQ*GLGKFPDFGRK
Trigger: CTTCCTACCAAAATCAGGGAATTTACCAAGTCCCCACTGGCCACGGCACCCAAGAACAAGAGGTATATCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 72 bp AGGAGGGATATCATAGACGTCCTTTTGGTATCTGGATaGGTACTCGTATACGTAGCCATGGCCTGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: RRDIIDVLLVSG*VLVYVAMACPH
Trigger: GTGAGGACAGGCCATGGCTACGTATACGAGTACCCATCCAGATACCAAAAGGACGTCTATGATATCCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 72 bp GAGAAGGAGGGATATCATAGACGTCCTTTTGGTATCTaGATGGGTACTCGTATACGTAGCCATGGCCTGTCC +
Preference number: 3 (lower is better)
Translates to: EKEGYHRRPFGI*MGTRIRSHGLS
Trigger: GGACAGGCCATGGCTACGTATACGAGTACCCATCCAGATACCAAAAGGACGTCTATGATATCCCTCCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGAATCAGATGTATGCTaGCCTATGAGGCTGGCAGAA +
Preference number: 3 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVESDVC*PMRLAE
Trigger: TTCTGCCAGCCTCATAGGCAAGCATACATCTGATTC...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp TCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCCACTGGGTCTTTTTCTGTaGCTTATTGGAAGAATTAGG +
Preference number: 3 (lower is better)
Translates to: SISTDALHAHTSVPSSMPLGLFL*LIGRIR
Trigger: CCTAATTCTTCCAATAAGCAACAGAAAAAGACCCAG...TGGCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CAA 90 bp CACAAATGCAGAAGATTGAACAGCCCCAGGGAGGCAATTGCTCTCCTTTTATTGGGAGTCTTCAACTCGTaGCAGCTCCCGCTTCATCTT +
Preference number: 3 (lower is better)
Translates to: HKCRRLNSPREAIALLLLGVFNS*QLPLHL
Trigger: AAGATGAAGCGGGAGCTGCAACGAGTTGAAGACTCC...CAATAAAAGGAGAGCAATTGCCTCCCTGGGGCTGTTCAATCTTCTGCATTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp GACGTAATCGTAGTCATCCATCCAGCTCCTCTCAGAACCATCACTGCTGCTACACACTTGTTCTGGGGCTaGTTGATGGCCAAGATATTC +
Preference number: 3 (lower is better)
Translates to: DVIVVIHPAPLRTITAATHLFWG*LMAKIF
Trigger: GAATATCTTGGCCATCAACAAGCCCCAGAACAAGTG...TGTAGCAGCAGTGATGGTTCTGAGAGGAGCTGGATGGATGACTACGATTACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR GCA 72 bp TGCCAGAGGCCATGGCCCCACTGGGTCTTTTTCTGTTaGTTATTGGAAGAATTAGGTCTGAAGAGGGAAGTA +
Preference number: 3 (lower is better)
Translates to: CQRPWPHWVFFC*LLEELGLKREV
Trigger: TACTTCCCTCTTCAGACCTAATTCTTCCAATAAGCAACAGAAAAAGACCCAGTGGGGCCATGGCCTCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR CCA 72 bp GTCACAGTTGTATTTTACATGAAGGTCCTTCCCTGCTaGCTTGGTGCAGGTTGGAGGAATGTCATAAACCCC +
Preference number: 3 (lower is better)
Translates to: VTVVFYMKVLPC*LGAGWRNVINP
Trigger: GGGGTTTATGACATTCCTCCAACCTGCACCAAGCCAGCAGGGAAGGACCTTCATGTAAAATACAACTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp CTGAATGCCTTTCCCCCACCAAGCCCTTCCCAAACAGATAATATGTCTCTATCCGAATCAGATGTATGCTaGCCTATGAGGCTGGCAGAA +
Preference number: 3 (lower is better)
Translates to: LNAFPPPSPSQTDNMSLSESDVC*PMRLAE
Trigger: TTCTGCCAGCCTCATAGGCAAGCATACATCTGATTC...GGATAGAGACATATTATCTGTTTGGGAAGGGCTTGGTGGGGGAAAGGCATTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CAA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAGCTATGCCTCATGATTaGGAAGGTGAACACTTGCAA +
Preference number: 3 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSAMPHD*EGEHLQ
Trigger: TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGC...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CAA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGCTATGCCTCATGATTaGGAAGGTGAACACTTGCAA +
Preference number: 3 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVAMPHD*EGEHLQ
Trigger: TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGC...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CAA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAAGCTGTCTCTCAGTATaGAAACAACCCAATCCTAAC +
Preference number: 3 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVSCLSV*KQPNPN
Trigger: GTTAGGATTGGGTTGTTTCAATACTGAGAGACAGCT...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CAA 90 bp CAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGAACACTTGCAAGTCAGGATGTCTCCCTaGCGAAAGGCCAGTTCCTCG +
Preference number: 3 (lower is better)
Translates to: QTRISHAMPHDLEGEHLQVRMSP*RKASSS
Trigger: CGAGGAACTGGCCTTTCGCAAGGGAGACATCCTGAC...TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CCA 72 bp TTTTCCCCAGTTGAGCTCGTATGTGACATGAACACCTaGGTTCTTCTTAACCACAAGCCAGAAACATGTGGG +
Preference number: 3 (lower is better)
Translates to: FSPVELVCDMNT*VLLNHKPETCG
Trigger: CCCACATGTTTCTGGCTTGTGGTTAAGAAGAACCCAGGTGTTCATGTCACATACGAGCTCAACTGGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR CCA 72 bp GGTGAACACTTGCAAATAAACTATGCTTCCCAGATTTaGGAGTGCCAGGCTCAGAATCATCACAAGGACGTG +
Preference number: 3 (lower is better)
Translates to: GEHLQINYASQI*ECQAQNHHKDV
Trigger: CACGTCCTTGTGATGATTCTGAGCCTGGCACTCCCAAATCTGGGAAGCATAGTTTATTTGCAAGTGTTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR CCA 72 bp GTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTaGTGTCTGTGCTGTGTCAATACTAACAGATGTGAG +
Preference number: 3 (lower is better)
Translates to: VFHLPHEEPDGL*CLCCVNTNRCE
Trigger: CTCACATCTGTTAGTATTGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CAA 90 bp CTGAATGCCTTTCCCCCACCAAGCCCTTCCCAAACAGATAATATGTCTCTATCCAAGAGACAGTGGTCCTaGATGATCATCTGTAGAGTT +
Preference number: 3 (lower is better)
Translates to: LNAFPPPSPSQTDNMSLSKRQWS*MIICRV
Trigger: AACTCTACAGATGATCATCAAGGACCACTGTCTCTT...GGATAGAGACATATTATCTGTTTGGGAAGGGCTTGGTGGGGGAAAGGCATTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CAA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGCTATGCTTCCCAGATTaGGGAGTGCCAGGCTCAGAA +
Preference number: 3 (lower is better)
Translates to: NYQSLDPHIYSEICSARGLCFPD*GVPGSE
Trigger: TTCTGAGCCTGGCACTCCCAAATCTGGGAAGCATAG...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CAA 90 bp GCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAAGCTATGCCTCATGATTaGGAAGGTGAACACTTGCAA +
Preference number: 3 (lower is better)
Translates to: APGRQLLSFYCSCLSVLKAMPHD*EGEHLQ
Trigger: TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGC...TTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CAA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATCTGAACTATCAGAGCTaGGATCCACATATATATTCT +
Preference number: 3 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNLNYQS*DPHIYS
Trigger: AGAATATATATGTGGATCCAAGCTCTGATAGTTCAG...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CAA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTAGCTGTCTCTCAGTATaGAAACAACCCAATCCTAAC +
Preference number: 3 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVSCLSV*KQPNPN
Trigger: GTTAGGATTGGGTTGTTTCAATACTGAGAGACAGCT...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CAA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAAACCATTCCCCTATTTaGGTGAACAATCATAGTCTG +
Preference number: 3 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVNHSPI*VNNHSL
Trigger: CAGACTATGATTGTTCACCAAAATAGGGGAATGGTT...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR TCA 72 bp CCTCTAAACACACAGGTCTCTCTTCCCTCCAGCACCTaGACTATCAGAGCTTGGATCCACATATATATTCTG +
Preference number: 3 (lower is better)
Translates to: PLNTQVSLPSST*TIRAWIHIYIL
Trigger: CAGAATATATATGTGGATCCAAGCTCTGATAGTTCAGGTGCTGGAGGGAAGAGAGACCTGTGTGTTTAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR GCA 72 bp GAGGTACTCCTTCAGGAACAGCTCCACCTTGTCCACTaGTGTGCGTATTTCATTGATGTGTCTTTCCATATA +
Preference number: 3 (lower is better)
Translates to: EVLLQEQLHLVH*CAYFIDVSFHI
Trigger: TATATGGAAAGACACATCAATGAAATACGCACAGCAGTGGACAAGGTGGAGCTGTTCCTGAAGGAGTACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGGAGTTCATGACTTTGTaGCGAATGTCCTGGGCAGTC +
Preference number: 3 (lower is better)
Translates to: NYQSLDPHIYSEICSARGEFMTL*RMSWAV
Trigger: GACTGCCCAGGACATTCGCAACAAAGTCATGAACTC...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 72 bp CTTATTGGAAGAATTAGGTCTGAAGAGGGAAGTAATTaGCAAACAGAAGCTGGACTCAGGCAGAGCTGGATC +
Preference number: 3 (lower is better)
Translates to: LIGRIRSEEGSN*QTEAGLRQSWI
Trigger: GATCCAGCTCTGCCTGAGTCCAGCTTCTGTTTGTCAATTACTTCCCTCTTCAGACCTAATTCTTCCAATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR TCA 72 bp AGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTaGATATTAAGAGTCAGAAAGGCCTCTACTTGCAAC +
Preference number: 3 (lower is better)
Translates to: SFPQVMGVVAPK*ILRVRKASTCN
Trigger: GTTGCAAGTAGAGGCCTTTCTGACTCTTAATATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR GCA 72 bp GTTGCCAGAACAGCTCAAAGCATGGAATCAGATGTATaGTTGCCTATGAGGCTGGCAGAAGGAAACAAAATT +
Preference number: 3 (lower is better)
Translates to: VARTAQSMESDV*LPMRLAEGNKI
Trigger: AATTTTGTTTCCTTCTGCCAGCCTCATAGGCAAGCATACATCTGATTCCATGCTTTGAGCTGTTCTGGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379433.5
ENST00000448183.6
3UTR-3UTR CAA 90 bp CTGAATGCCTTTCCCCCACCAAGCCCTTCCCAAACAGATAATATGTCTCTATCCCTGTTCGTATCAGTATaGGCATTATTACGGTTATCA +
Preference number: 3 (lower is better)
Translates to: LNAFPPPSPSQTDNMSLSLFVSV*ALLRLS
Trigger: TGATAACCGTAATAATGCCAATACTGATACGAACAG...GGATAGAGACATATTATCTGTTTGGGAAGGGCTTGGTGGGGGAAAGGCATTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CAA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCATCCGCAAGAGGGCTTTaGGGCACTTGGCCATCATGT +
Preference number: 3 (lower is better)
Translates to: LLLLVICEYIYPWGRSISSARGL*GTWPSC
Trigger: ACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGA...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CAA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCTTTCTTCTCAGAACGTaGCCATCTCCAGCAAAGAGC +
Preference number: 3 (lower is better)
Translates to: LLVICEYIYPWGRSISPAFLLRT*PSPAKS
Trigger: GCTCTTTGCTGGAGATGGCAACGTTCTGAGAAGAAA...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 72 bp CTGGATCTAAATCCCGGTTCTACCACTCACAAGCTATaGGAACAAAGGTTCCATTCTAAGCCTGTTTTCTCA +
Preference number: 3 (lower is better)
Translates to: LDLNPGSTTHKL*EQRFHSKPVFS
Trigger: TGAGAAAACAGGCTTAGAATGGAACCTTTGTTCTCATAGCTTGTGAGTGGTAGAACCGGGATTTAGATCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR TCA 72 bp AATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTaGAACAACCCAATCCTAACTGTGGTCCTGGCCTCT +
Preference number: 3 (lower is better)
Translates to: NCSPFIVAVSQY*NNPILTVVLAS
Trigger: AGAGGCCAGGACCACAGTTAGGATTGGGTTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR CCA 72 bp CTTGGGGTTACTGTTTTCTGCTGTTCGTATCAGTATTaGCATTATTACGGTTATCACCAGAGCAGCTCAAGA +
Preference number: 3 (lower is better)
Translates to: LGVTVFCCSYQY*HYYGYHQSSSR
Trigger: TCTTGAGCTGCTCTGGTGATAACCGTAATAATGCCAATACTGATACGAACAGCAGAAAACAGTAACCCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CAA 90 bp ATCACTTGTGGTTTGACGGTCTTGATGCATCTCATCTCTTCTTCCAGCATTTTATTTTCTACAGCTTCTTaGGGTAAGGGGGAACATTGG +
Preference number: 3 (lower is better)
Translates to: ITCGLTVLMHLISSSSILFSTAS*GKGEHW
Trigger: CCAATGTTCCCCCTTACCCAAAGAAGCTGTAGAAAA...TAAAATGCTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CAA 90 bp GCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAACTGAACTATCAGAGCTaGGATCCACATATATATTCT +
Preference number: 3 (lower is better)
Translates to: APGRQLLSFYCSCLSVLKLNYQS*DPHIYS
Trigger: AGAATATATATGTGGATCCAAGCTCTGATAGTTCAG...TTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR CCA 72 bp GAATTTCAAACCAAAGCAGCAAATGGTAAGAGACAGTaGTCCTTGATGATCATCTGTAGAGTTCTTGGGGTT +
Preference number: 3 (lower is better)
Translates to: EFQTKAANGKRQ*SLMIICRVLGV
Trigger: AACCCCAAGAACTCTACAGATGATCATCAAGGACCACTGTCTCTTACCATTTGCTGCTTTGGTTTGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR CCA 72 bp ATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTaGGCACTTGGCCATCATGTGTTTAAGATGGTCAGT +
Preference number: 3 (lower is better)
Translates to: IYILKFAPQEGF*ALGHHVFKMVS
Trigger: ACTGACCATCTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CAA 90 bp AGCACTTATCACTTGTGGTTTGACGGTCTTGATGCATCTCATCTCTTCTTCCAGTTACTAGGTCAAACTTaGGGAGAAGAGTTAATAGAG +
Preference number: 3 (lower is better)
Translates to: STYHLWFDGLDASHLFFQLLGQT*GEELIE
Trigger: CTCTATTAACTCTTCTCCCAAAGTTTGACCTAGTAA...CTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGATAAGTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CAA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCAACCATTCCCCTATTTaGGTGAACAATCATAGTCTG +
Preference number: 3 (lower is better)
Translates to: LLVICEYIYPWGRSISPANHSPI*VNNHSL
Trigger: CAGACTATGATTGTTCACCAAAATAGGGGAATGGTT...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR-3UTR CAA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCATTGTTCTGGGGCTTGTaGATGGCCAAGATATTCAGG +
Preference number: 3 (lower is better)
Translates to: LLLLVICEYIYPWGRSISLFWGL*MAKIFR
Trigger: CCTGAATATCTTGGCCATCAACAAGCCCCAGAACAA...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR-3UTR CAA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGTAAATTCCCTGATTTaGGTAGGAAGGTGGCACTTG +
Preference number: 3 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGVNSLI*VGRWHL
Trigger: CAAGTGCCACCTTCCTACCAAAATCAGGGAATTTAC...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR TCA 72 bp GAATGTATAGTGCTCAAAATGAGATCTACGAGGCAGTaGGAATTTCAAACCAAAGCAGCAAATGGTAAGAGA +
Preference number: 3 (lower is better)
Translates to: ECIVLKMRSTRQ*EFQTKAANGKR
Trigger: TCTCTTACCATTTGCTGCTTTGGTTTGAAATTCTCACTGCCTCGTAGATCTCATTTTGAGCACTATACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR-3UTR CAA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTTGGCAGAGTAGGACTTaGAGAATTATAATAGCAGTT +
Preference number: 3 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGWQSRT*RIIIAV
Trigger: AACTGCTATTATAATTCTCAAAGTCCTACTCTGCCA...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GGCGTCATCGGGCACCGTCTTTGCCACCATCACAAACCGGTCCAGATCGTCACAGCAGGGCCGTGGTGCTaGGGTAATGGAGGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GVIGHRLCHHHKPVQIVTAGPWC*GNGGRP
Trigger: TGGCCGCCCTCCATTACCCCAGCACCACGGCCCTGC...TGTGACGATCTGGACCGGTTTGTGATGGTGGCAAAGACGGTGCCCGATGACGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp GTTGCGGGGGTGGGTGATTCGGGGACAGGCTCTGGTGCCTTCGAGCCACCGGTTCCAGTGCCATTAGGCTaGAGACACCCATCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: VAGVGDSGTGSGAFEPPVPVPLG*RHPSQG
Trigger: CCCTTGAGATGGGTGTCTCCAGCCTAATGGCACTGG...AACCGGTGGCTCGAAGGCACCAGAGCCTGTCCCCGAATCACCCACCCCCGCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp GTTGCGGGGGTGGGTGATTCGGGGACAGGCTCTGGTGCCTTCGAGCCACCGGTTAGAAAGACAATCGGTTaGTCCCATCCACCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: VAGVGDSGTGSGAFEPPVRKTIG*SHPPSP
Trigger: GGGACTTGGTGGATGGGATCAACCGATTGTCTTTCT...AACCGGTGGCTCGAAGGCACCAGAGCCTGTCCCCGAATCACCCACCCCCGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp TCTGCTGCATCAGTCCAGAGGCAGGCTGCTCGTGACTGGAGGCAGTCTCCTGCATCTTGTTGTGGAGGATaGGTTCCGGGAGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SAASVQRQAARDWRQSPASCCGG*VPGGRQ
Trigger: CTGCCTGCCTCCCGGAACTCATCCTCCACAACAAGA...TGCAGGAGACTGCCTCCAGTCACGAGCAGCCTGCCTCTGGACTGATGCAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp GCAGGTTGGAGGAATGTCATAAACCCCCTCCGGTCTGAGGTCCGGCCTTCCAGCGAAGCTTCACCCGGTTaGCTGGGACAATGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: AGWRNVINPLRSEVRPSSEASPG*LGQCLA
Trigger: GGCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTC...GCTGGAAGGCCGGACCTCAGACCGGAGGGGGTTTATGACATTCCTCCAACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp TGCCTGGGAGGCTGTGCTGGGTTTTCTACAGCTTCTTTGGGTAAGGGGGAACATAGGGCCCCCAGGCTCTaGACCAACTCCCTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: CLGGCAGFSTASLGKGEHRAPRL*TNSLPR
Trigger: CCGAGGGAGGGAGTTGGTGCAGAGCCTGGGGGCCCT...ATGTTCCCCCTTACCCAAAGAAGCTGTAGAAAACCCAGCACAGCCTCCCAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp GGAAGGTGGCACTTGGTAGATGGTGTCTCGGGGAGCAGCCTGTGGGTTTGGCACGTGGCACTTGGTAGATaGTGTCTCGGGGAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GRWHLVDGVSGSSLWVWHVALGR*CLGEQP
Trigger: AGGCTGCTCCCCGAGACACCATCTACCAAGTGCCAC...GTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAGTGCCACCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp GCAGGTTGGAGGAATGTCATAAACCCCCTCCGGTCTGAGGTCCGGCCTTCCAGCAAGATTCGCGGGGGCTaGGCTGAGCTGACACAACTG +
Preference number: 4 (lower is better)
Translates to: AGWRNVINPLRSEVRPSSKIRGG*AELTQL
Trigger: CAGTTGTGTCAGCTCAGCCCAGCCCCCGCGAATCTT...GCTGGAAGGCCGGACCTCAGACCGGAGGGGGTTTATGACATTCCTCCAACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp CTAAGCCCTGCTTCATCCCGGCAAGCAGAGGGCGGAATGGCATATACCCCTTTTGTTCTGAGAGCCCACTaGCTGTCCGAGTTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: LSPASSRQAEGGMAYTPFVLRAH*LSELRG
Trigger: CCCCCGCAACTCGGACAGTCAGTGGGCTCTCAGAAC...AAAAGGGGTATATGCCATTCCGCCCTCTGCTTGCCGGGATGAAGCAGGGCTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp GGAAGGTGGCACTTGGTAGATGGTGTCTCGGGGAGCAGCCTGTGGGTTTGGCACGGGCTGTTCTTGGCTTaGTACGGTGCCCAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: GRWHLVDGVSGSSLWVWHGLFLA*YGAQSF
Trigger: AAAGCTCTGGGCACCGTATCAAGCCAAGAACAGCCC...GTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAGTGCCACCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp TCCTTCCAGTCCCCCTGTGTTCTGCTCTATGACGGTCAGGATGTCTCCCTTGCGGGCCCATTCTTCAGATaGAAGCTGCCAGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: SFQSPCVLLYDGQDVSLAGPFFR*KLPGPG
Trigger: ACCCGGCCCTGGCAGCTTGCATCTGAAGAATGGGCC...CGCAAGGGAGACATCCTGACCGTCATAGAGCAGAACACAGGGGGACTGGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp TCTGCTGCATCAGTCCAGAGGCAGGCTGCTCGTGACTGGAGGCAGTCTCCTGCACAGAACCATCACTGCTaGTACAGTCAGGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SAASVQRQAARDWRQSPAQNHHC*YSQGPA
Trigger: AGCAGGCCCCTGACTGTAGCAGCAGTGATGGTTCTG...TGCAGGAGACTGCCTCCAGTCACGAGCAGCCTGCCTCTGGACTGATGCAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp ACCCCAAGTTGGGTGAAGCCACTATTGGCAGGCAAGGAGGGCTGCTGGATGGTTCAGGCTGCTCGTGACTaGAGGCAGTCTCCTGCATGG +
Preference number: 4 (lower is better)
Translates to: TPSWVKPLLAGKEGCWMVQAARD*RQSPAW
Trigger: CCATGCAGGAGACTGCCTCCAGTCACGAGCAGCCTG...AACCATCCAGCAGCCCTCCTTGCCTGCCAATAGTGGCTTCACCCAACTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp ACCCCAAGTTGGGTGAAGCCACTATTGGCAGGCAAGGAGGGCTGCTGGATGGTTCCACGTGGGGCCCACTaGTTCCCCCAATGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TPSWVKPLLAGKEGCWMVPRGAH*FPQCFS
Trigger: AGAGAAGCATTGGGGGAACCAGTGGGCCCCACGTGG...AACCATCCAGCAGCCCTCCTTGCCTGCCAATAGTGGCTTCACCCAACTTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp TCCTTCCAGTCCCCCTGTGTTCTGCTCTATGACGGTCAGGATGTCTCCCTTGCGCCACGTGGGGCCCACTaGTTCCCCCAATGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SFQSPCVLLYDGQDVSLAPRGAH*FPQCFS
Trigger: AGAGAAGCATTGGGGGAACCAGTGGGCCCCACGTGG...CGCAAGGGAGACATCCTGACCGTCATAGAGCAGAACACAGGGGGACTGGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp GCAGGTTGGAGGAATGTCATAAACCCCCTCCGGTCTGAGGTCCGGCCTTCCAGCCCTTCCCTGCTGGCTTaGTGCAGGTTGGAGGAATGT +
Preference number: 4 (lower is better)
Translates to: AGWRNVINPLRSEVRPSSPSLLA*CRLEEC
Trigger: ACATTCCTCCAACCTGCACCAAGCCAGCAGGGAAGG...GCTGGAAGGCCGGACCTCAGACCGGAGGGGGTTTATGACATTCCTCCAACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp CGCGGGGGCTGGGCTGAGCTGACACAACTGAAGAGTGCGTCAATGGCGTTGAGAAGGAGGTGGAAGACGTaGACATGTTACTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: RGGWAELTQLKSASMALRRRWKT*TCYSGC
Trigger: GCACCCGGAGTAACATGTCCACGTCTTCCACCTCCT...TCTCAACGCCATTGACGCACTCTTCAGTTGTGTCAGCTCAGCCCAGCCCCCGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp CGCGGGGGCTGGGCTGAGCTGACACAACTGAAGAGTGCGTCAATGGCGTTGAGAAAGTCATGGCTGGTTTaGCTCAGGATCTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RGGWAELTQLKSASMALRKSWLV*LRIWWE
Trigger: CTCCCACCAGATCCTGAGTCAAACCAGCCATGACTT...TCTCAACGCCATTGACGCACTCTTCAGTTGTGTCAGCTCAGCCCAGCCCCCGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp GGAAGGTGGCACTTGGTAGATGGTGTCTCGGGGAGCAGCCTGTGGGTTTGGCACCACTGGTTCCCCCAATaGTTCTCTGCACTGATGGTG +
Preference number: 4 (lower is better)
Translates to: GRWHLVDGVSGSSLWVWHHWFPQ*FSALMV
Trigger: CACCATCAGTGCAGAGAAGCATTGGGGGAACCAGTG...GTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAGTGCCACCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp GGAAGGTGGCACTTGGTAGATGGTGTCTCGGGGAGCAGCCTGTGGGTTTGGCACTCCCTGCTGGCTTGGTaGAGGTTGGAGGAATGTCAT +
Preference number: 4 (lower is better)
Translates to: GRWHLVDGVSGSSLWVWHSLLAW*RLEECH
Trigger: ATGACATTCCTCCAACCTGCACCAAGCCAGCAGGGA...GTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAGTGCCACCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCACCTGCAGGGCCGTGGTaGTGGGGTAATGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSPAGPW*WGNGGR
Trigger: CCGCCCTCCATTACCCCAGCACCACGGCCCTGCAGG...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp TGTCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCCTTCACCCGGTTGCCTaGGACAATGCCTTGCCGACC +
Preference number: 4 (lower is better)
Translates to: CPFPQMPCTPIPLCLHPCLHPVA*DNALPT
Trigger: GGTCGGCAAGGCATTGTCCCAGGCAACCGGGTGAAG...GCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp CAGTCGGTAGTGACCAGTGCCATTAGGCTGGAGACACCCATCTCAAGGGCCTGCTATACCTCTTGTTCTTaGGTGCCGTGGCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: QSVVTSAIRLETPISRACYTSCS*VPWPVG
Trigger: CCCCACTGGCCACGGCACCCAAGAACAAGAGGTATA...GCAGGCCCTTGAGATGGGTGTCTCCAGCCTAATGGCACTGGTCACTACCGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp CTGGGGGTTTGCTTTCTCACTGGTTTCTGCTGGTGGCTCAAGAAACTGAACGCCTCCGAGTTGCGGGGGTaGGTGATTCGGGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: LGVCFLTGFCWWLKKLNASELRG*VIRGQA
Trigger: AGCCTGTCCCCGAATCACCCACCCCCGCAACTCGGA...GGCGTTCAGTTTCTTGAGCCACCAGCAGAAACCAGTGAGAAAGCAAACCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp GCCTCTGCGTTGGTGTTGATGGTTGTGGTGAGCTGCTaGGCGTCATCGGGCACCGTCTTTGCCACCATCACA +
Preference number: 4 (lower is better)
Translates to: ASALVLMVVVSC*ASSGTVFATIT
Trigger: TGTGATGGTGGCAAAGACGGTGCCCGATGACGCCAAGCAGCTCACCACAACCATCAACACCAACGCAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp ACAGCAACTGCCGATCCTGAGCACTCACGCCACTGTTaGTGGTGGGTAGGCTCTGAGAGGGCTTCCACTTCG +
Preference number: 4 (lower is better)
Translates to: TATADPEHSRHC*WWVGSERASTS
Trigger: CGAAGTGGAAGCCCTCTCAGAGCCTACCCACCACAAACAGTGGCGTGAGTGCTCAGGATCGGCAGTTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTGAGGCAGGCTGCTCGTaGCTGGAGGCAGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCEAGCS*LEAVSC
Trigger: GCAGGAGACTGCCTCCAGTCACGAGCAGCCTGCCTC...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR TCA 90 bp TCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCCACACCCTTGCACAGGCTaGAGACATCAGGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: SISTDALHAHTSVPSSMPHPCTG*RHQGCQ
Trigger: CTGGCAACCCTGATGTCTTCAGCCTGTGCAAGGGTG...TGGCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp ACCCCAAGTTGGGTGAAGCCACTATTGGCAGGCAAGGAGGGCTGCTGGATGGTTCCTGGGACAATGCCTTaGCGACCGTGTAATGAGCAC +
Preference number: 4 (lower is better)
Translates to: TPSWVKPLLAGKEGCWMVPGTMP*RPCNEH
Trigger: GTGCTCATTACACGGTCGGCAAGGCATTGTCCCAGG...AACCATCCAGCAGCCCTCCTTGCCTGCCAATAGTGGCTTCACCCAACTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp ACCCCAAGTTGGGTGAAGCCACTATTGGCAGGCAAGGAGGGCTGCTGGATGGTTGTGCCTGGGAGGCTGTaGTGGGTTTTCTACAGCTTC +
Preference number: 4 (lower is better)
Translates to: TPSWVKPLLAGKEGCWMVVPGRL*WVFYSF
Trigger: GAAGCTGTAGAAAACCCAGCACAGCCTCCCAGGCAC...AACCATCCAGCAGCCCTCCTTGCCTGCCAATAGTGGCTTCACCCAACTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp GGAAGGTGGCACTTGGTAGATGGTGTCTCGGGGAGCAGCCTGTGGGTTTGGCACTTTTTCCCTAAGCCCTaGTTCATCCCGGCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GRWHLVDGVSGSSLWVWHFFPKP*FIPASR
Trigger: TCTGCTTGCCGGGATGAAGCAGGGCTTAGGGAAAAA...GTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAGTGCCACCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp ATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGGGGGACAGGCTCTGGTaGCTTCGAGCCACCGGTTCT +
Preference number: 4 (lower is better)
Translates to: MIKDLASFPQVMGVVAPKGDRLW*LRATGS
Trigger: AGAACCGGTGGCTCGAAGGCACCAGAGCCTGTCCCC...CTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CTAAGCCCTGCTTCATCCCGGCAAGCAGAGGGCGGAATGGCATATACCCCTTTTTTGTGGTCACCAGGATaGAGCAGCTGTCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LSPASSRQAEGGMAYTPFLWSPG*SSCPWE
Trigger: CTCCCAGGGACAGCTGCTGCATCCTGGTGACCACAA...AAAAGGGGTATATGCCATTCCGCCCTCTGCTTGCCGGGATGAAGCAGGGCTTAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp GCAGGTTGGAGGAATGTCATAAACCCCCTCCGGTCTGAGGTCCGGCCTTCCAGCTGGCTTGGTGCAGGTTaGAGGAATGTCATAAACCCC +
Preference number: 4 (lower is better)
Translates to: AGWRNVINPLRSEVRPSSWLGAG*RNVINP
Trigger: GGGGTTTATGACATTCCTCCAACCTGCACCAAGCCA...GCTGGAAGGCCGGACCTCAGACCGGAGGGGGTTTATGACATTCCTCCAACCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp ATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGGGCCTGGGCCTTGTaGTCACCAGGATGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: MIKDLASFPQVMGVVAPKWAWAL*SPGCSS
Trigger: GCTGCTGCATCCTGGTGACCACAAGGCCCAGGCCCA...CTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp AGTTCCGGGAGGCAGGCAGCATTTGCAACAGCTCCCTTGACAAAGTGGAGGTACGGATGGAACCGCTGGTaGATCATCTTGCCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: SSGRQAAFATAPLTKWRYGWNRW*IILPPR
Trigger: TCGGGGAGGCAAGATGATCCACCAGCGGTTCCATCC...GTACCTCCACTTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGCCTCCCGGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp CCTGTGTTCTGCTCTATGACGGTCAGGATGTCTCCCTaGCGAAAGGCCAGTTCCTCGGCACACTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: PVFCSMTVRMSP*RKASSSAHSGT
Trigger: TGTCCCAGAGTGTGCCGAGGAACTGGCCTTTCGCAAGGGAGACATCCTGACCGTCATAGAGCAGAACACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp GTCTCCTGCATGGGACCAATCAGAAGCTTCACCCGGTaGCCTGGGACAATGCCTTGCCGACCGTGTAATGAG +
Preference number: 4 (lower is better)
Translates to: VSCMGPIRSFTR*PGTMPCRPCNE
Trigger: CTCATTACACGGTCGGCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTCTGATTGGTCCCATGCAGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp TGGGAGTCTTCAACTCGTTGCAGCTCCCGCTTCATCTaGTTGTGGAGGATGAGTTCCGGGAGGCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: WESSTRCSSRFI*LWRMSSGRQAA
Trigger: TGCTGCCTGCCTCCCGGAACTCATCCTCCACAACAAGATGAAGCGGGAGCTGCAACGAGTTGAAGACTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp TGCTCGCAGAGCTGGTTGCTGGAGTTCATGACTTTGTaGCGAATGTCCTGGGCAGTCACCTGCCGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: CSQSWLLEFMTL*RMSWAVTCRVS
Trigger: GCTGACACGGCAGGTGACTGCCCAGGACATTCGCAACAAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp AGCTGCTCGCAGAGCTGGTTGCTGGAGTTCATGACTTaGTTGCGAATGTCCTGGGCAGTCACCTGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: SCSQSWLLEFMT*LRMSWAVTCRV
Trigger: GACACGGCAGGTGACTGCCCAGGACATTCGCAACAAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp TGGAGGGCGGCCATCTTGGTTGCCATGACTATGGTCTaGAGCTGCTCGCAGAGCTGGTTGCTGGAGTTCATG +
Preference number: 4 (lower is better)
Translates to: WRAAILVAMTMV*SCSQSWLLEFM
Trigger: CATGAACTCCAGCAACCAGCTCTGCGAGCAGCTCAAGACCATAGTCATGGCAACCAAGATGGCCGCCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATGAGTGCAGCGCTAGATaGAAGCGAGAAGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNECSAR*KREGPG
Trigger: CCCGGGACCTTCTCGCTTTCATCTAGCGCTGCACTC...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000620854.4
CDS-3UTR TCA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTATCGCGGGGGCTGGGCTaGGCTGACACAACTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVSRGLG*ADTTEE
Trigger: CTCTTCAGTTGTGTCAGCTCAGCCCAGCCCCCGCGA...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CATGACTATGGTCTTGAGCTGCTCGCAGAGCTGGTTGCTGGAGTTCATGACTTTGGGGACAGGCTCTGGTaGCTTCGAGCCACCGGTTCT +
Preference number: 4 (lower is better)
Translates to: HDYGLELLAELVAGVHDFGDRLW*LRATGS
Trigger: AGAACCGGTGGCTCGAAGGCACCAGAGCCTGTCCCC...AAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCAGCTCAAGACCATAGTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp CAGTCGGTAGTGACCAGTGCCATTAGGCTGGAGACACCCATCTCAAGGGCCTGCTGTTACTCCGGGTGCTaGCTGTACTGGAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: QSVVTSAIRLETPISRACCYSGC*LYWRKT
Trigger: TGTCTTTCTCCAGTACAGGCAGCACCCGGAGTAACA...GCAGGCCCTTGAGATGGGTGTCTCCAGCCTAATGGCACTGGTCACTACCGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTATGGTGCACCATTTCCTaGAGGGCCGTGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVWCTIS*RAVVLG
Trigger: CCCCAGCACCACGGCCCTGCAGGAAATGGTGCACCA...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TTTTCCCTAAGCCCTGCTTCATCCCGGCAAGCAGAGGGCGGAATGGCATATACCAGGTCTGTCACTTGGTaGACCATTTCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: FSLSPASSRQAEGGMAYTRSVTW*TISCRA
Trigger: GGCCCTGCAGGAAATGGTGCACCAAGTGACAGACCT...GGTATATGCCATTCCGCCCTCTGCTTGCCGGGATGAAGCAGGGCTTAGGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp TCTGCTGCATCAGTCCAGAGGCAGGCTGCTCGTGACTGGAGGCAGTCTCCTGCAGATTCTTGGAACGTTTaGCCAGAAAGGAGATTGGGC +
Preference number: 4 (lower is better)
Translates to: SAASVQRQAARDWRQSPADSWNV*PERRLG
Trigger: GCCCAATCTCCTTTCTGGGCAAACGTTCCAAGAATC...TGCAGGAGACTGCCTCCAGTCACGAGCAGCCTGCCTCTGGACTGATGCAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATCTTCACCCGGTTGCCTaGGACAATGCCTTGCCGACC +
Preference number: 4 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNLHPVA*DNALPT
Trigger: GGTCGGCAAGGCATTGTCCCAGGCAACCGGGTGAAG...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CCA 90 bp TGTCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCTATACCTCTTGTTCTTaGGTGCCGTGGCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: CPFPQMPCTPIPLCLHPCYTSCS*VPWPVG
Trigger: CCCCACTGGCCACGGCACCCAAGAACAAGAGGTATA...GCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp TTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAATATTCGGGGACAGGCTCTaGTGCCTTCGAGCCACCGGT +
Preference number: 4 (lower is better)
Translates to: FTCPMKNLMACGVCAVSIFGDRL*CLRATG
Trigger: ACCGGTGGCTCGAAGGCACCAGAGCCTGTCCCCGAA...TATTGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCATCCGAGTTGCGGGGGTaGGTGATTCGGGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSSELRG*VIRGQA
Trigger: AGCCTGTCCCCGAATCACCCACCCCCGCAACTCGGA...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp ATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTTTCCTGCAGGGCCGTaGTGCTGGGGTAATGGAGGG +
Preference number: 4 (lower is better)
Translates to: MIKDLASFPQVMGVVAPKFPAGP*CWGNGG
Trigger: CCCTCCATTACCCCAGCACCACGGCCCTGCAGGAAA...CTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GGAAGGTGGCACTTGGTAGATGGTGTCTCGGGGAGCAGCCTGTGGGTTTGGCACGAGCGCTTGAACAGCTaGGCATTTCTAGAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: GRWHLVDGVSGSSLWVWHERLNS*AFLERS
Trigger: AGACCTTTCTAGAAATGCCCAGCTGTTCAAGCGCTC...GTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAGTGCCACCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp GATGGTGTCTCGGGGAGCAGCCTGTGGGTTTGGCACTaGATAGAGCTTCTGTTGGCCAAAGGTCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: DGVSGSSLWVWH*IELLLAKGLLH
Trigger: ATGCAGCAGACCTTTGGCCAACAGAAGCTCTATCAAGTGCCAAACCCACAGGCTGCTCCCCGAGACACCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp CTCCGGGTGCTGCCTGTACTGGAGAAAGACAATCGGTaGATCCCATCCACCAAGTCCCGAGAGCCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: LRVLPVLEKDNR*IPSTKSREPLA
Trigger: TGCTAAAGGCTCTCGGGACTTGGTGGATGGGATCAACCGATTGTCTTTCTCCAGTACAGGCAGCACCCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp AGTTCCGGGAGGCAGGCAGCATTTGCAACAGCTCCCTaGACAAAGTGGAGGTACTCCTTCAGGAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSGRQAAFATAP*TKWRYSFRNSS
Trigger: GGAGCTGTTCCTGAAGGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGCCTCCCGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp TCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCCACTGTGTTCTGCTCTATaGCGGTCAGGATGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SISTDALHAHTSVPSSMPLCSAL*RSGCLP
Trigger: AGGGAGACATCCTGACCGTCATAGAGCAGAACACAG...TGGCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR TCA 90 bp GCAGGCAGCATTTGCAACAGCTCCCTTGACAAAGTGGAGGTACTCCTTCAGGAACACCCTTGCACAGGCTaGAGACATCAGGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: AGSICNSSLDKVEVLLQEHPCTG*RHQGCQ
Trigger: CTGGCAACCCTGATGTCTTCAGCCTGTGCAAGGGTG...TTCCTGAAGGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp AACAGTGCCCTATCAGCCATGCATGGTAGTGTTGGGCAAGAGAGGGATCCAAGAGCACCCCAAGTTGGGTaGAGCCACTATTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: NSALSAMHGSVGQERDPRAPQVG*SHYWQA
Trigger: TGCCTGCCAATAGTGGCTTCACCCAACTTGGGGTGC...TCTTGGATCCCTCTCTTGCCCAACACTACCATGCATGGCTGATAGGGCACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR TCA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTGTGGTGGGTAGGCTCTaGGAGGGCTTCCACTTCGAG +
Preference number: 4 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCVVGRL*EGFHFE
Trigger: CTCGAAGTGGAAGCCCTCTCAGAGCCTACCCACCAC...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp TGCAGCTCCCGCTTCATCTTGTTGTGGAGGATGAGTTCCGGGAGGCAGGCAGCAAGCTCTATAGTTCCATaGTCAAGGACCTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: CSSRFILLWRMSSGRQAASSIVP*SRTWPV
Trigger: AACTGGCCAGGTCCTTGATCATGGAACTATAGAGCT...TGCTGCCTGCCTCCCGGAACTCATCCTCCACAACAAGATGAAGCGGGAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp TCCTTCCAGTCCCCCTGTGTTCTGCTCTATGACGGTCAGGATGTCTCCCTTGCGATGTTTGCCAGTGTCTaGCATTACGGACCTCACAGC +
Preference number: 4 (lower is better)
Translates to: SFQSPCVLLYDGQDVSLAMFASV*HYGPHS
Trigger: GCTGTGAGGTCCGTAATGTCAGACACTGGCAAACAT...CGCAAGGGAGACATCCTGACCGTCATAGAGCAGAACACAGGGGGACTGGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp TGCCTGGGAGGCTGTGCTGGGTTTTCTACAGCTTCTTTGGGTAAGGGGGAACATTCAGGATGTCTCCCTTaGGAAAGGCCAGTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: CLGGCAGFSTASLGKGEHSGCLP*ERPVPR
Trigger: CCGAGGAACTGGCCTTTCGCAAGGGAGACATCCTGA...ATGTTCCCCCTTACCCAAAGAAGCTGTAGAAAACCCAGCACAGCCTCCCAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp AACAGTGCCCTATCAGCCATGCATGGTAGTGTTGGGCAAGAGAGGGATCCAAGAGAAGCTTCACCCGGTTaGCTGGGACAATGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: NSALSAMHGSVGQERDPREASPG*LGQCLA
Trigger: GGCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTC...TCTTGGATCCCTCTCTTGCCCAACACTACCATGCATGGCTGATAGGGCACTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp TGCCTGGGAGGCTGTGCTGGGTTTTCTACAGCTTCTTTGGGTAAGGGGGAACATGCAGGCAAGGAGGGCTaGTGGATGGTTTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: CLGGCAGFSTASLGKGEHAGKEG*WMVSFS
Trigger: GGAAAAGGAAACCATCCAGCAGCCCTCCTTGCCTGC...ATGTTCCCCCTTACCCAAAGAAGCTGTAGAAAACCCAGCACAGCCTCCCAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp TCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCCAGTGCCCTATCAGCCATaGATGGTAGTGTTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SISTDALHAHTSVPSSMPVPYQP*MVVLGK
Trigger: CTTGCCCAACACTACCATGCATGGCTGATAGGGCAC...TGGCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp GCAGGTTGGAGGAATGTCATAAACCCCCTCCGGTCTGAGGTCCGGCCTTCCAGCCTCCACCTTGTCCACTaGTGTGCGTATTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: AGWRNVINPLRSEVRPSSLHLVH*CAYFID
Trigger: ATCAATGAAATACGCACAGCAGTGGACAAGGTGGAG...GCTGGAAGGCCGGACCTCAGACCGGAGGGGGTTTATGACATTCCTCCAACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp ATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTTGTGGTCACCAGGATaGAGCAGCTGTCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: MIKDLASFPQVMGVVAPKLWSPG*SSCPWE
Trigger: CTCCCAGGGACAGCTGCTGCATCCTGGTGACCACAA...CTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TTTTCCCTAAGCCCTGCTTCATCCCGGCAAGCAGAGGGCGGAATGGCATATACCTCTCAGAACCATCACTaGTGCTACAGTCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: FSLSPASSRQAEGGMAYTSQNHH*CYSQGP
Trigger: AGGCCCCTGACTGTAGCAGCAGTGATGGTTCTGAGA...GGTATATGCCATTCCGCCCTCTGCTTGCCGGGATGAAGCAGGGCTTAGGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCACAGGCTGCTCGTGACTaGAGGCAGTCTCCTGCATGG +
Preference number: 4 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSQAARD*RQSPAW
Trigger: CCATGCAGGAGACTGCCTCCAGTCACGAGCAGCCTG...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CCA 90 bp GCAGGTTGGAGGAATGTCATAAACCCCCTCCGGTCTGAGGTCCGGCCTTCCAGCATTTTGGTAGGAAGGTaGCACTTGGTAGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: AGWRNVINPLRSEVRPSSILVGR*HLVDGV
Trigger: GACACCATCTACCAAGTGCCACCTTCCTACCAAAAT...GCTGGAAGGCCGGACCTCAGACCGGAGGGGGTTTATGACATTCCTCCAACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp ACCCCAAGTTGGGTGAAGCCACTATTGGCAGGCAAGGAGGGCTGCTGGATGGTTAGGCCATGGCCCCACTaGGTCTTTTTCTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: TPSWVKPLLAGKEGCWMVRPWPH*VFFCCL
Trigger: TAAGCAACAGAAAAAGACCCAGTGGGGCCATGGCCT...AACCATCCAGCAGCCCTCCTTGCCTGCCAATAGTGGCTTCACCCAACTTGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp TTTTCCCTAAGCCCTGCTTCATCCCGGCAAGCAGAGGGCGGAATGGCATATACCAGAGCCTTTAGCATCTaGCGGGTTATGCAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: FSLSPASSRQAEGGMAYTRAFSI*RVMQRD
Trigger: GTCCCTCTGCATAACCCGCCAGATGCTAAAGGCTCT...GGTATATGCCATTCCGCCCTCTGCTTGCCGGGATGAAGCAGGGCTTAGGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTGCCTTGTTGTGGGCCTaGGCCTTGTGGTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCALLWA*ALWSPG
Trigger: TCCTGGTGACCACAAGGCCCAGGCCCACAACAAGGC...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp TTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAATAGCCTTGTTGTGGGCCTaGGCCTTGTGGTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: FTCPMKNLMACGVCAVSIALLWA*ALWSPG
Trigger: TCCTGGTGACCACAAGGCCCAGGCCCACAACAAGGC...TATTGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTGGCAGTGCCTTGTTGTaGGCCTGGGCCTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCGSALL*AWALWS
Trigger: TGACCACAAGGCCCAGGCCCACAACAAGGCACTGCC...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTCGCTCTGGCCCTCTCTaGGCAGGCGGGCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTRSGPL*AGGREV
Trigger: CACCTCCCGCCCGCCTGCCCAGAGAGGGCCAGAGCG...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
3UTR CAA 72 bp TGCCTGGGAGGCTGTGCTGGGTTTTCTACAGCTTCTTaGGGTAAGGGGGAACATTGGACTATAGGGCTCACC +
Preference number: 4 (lower is better)
Translates to: CLGGCAGFSTAS*GKGEHWTIGLT
Trigger: GGTGAGCCCTATAGTCCAATGTTCCCCCTTACCCAAAGAAGCTGTAGAAAACCCAGCACAGCCTCCCAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR CAA 72 bp CTTGGTAGATGGTGTCTCGGGGAGCAGCCTGTGGGTTaGGCACTTGATAGAGCTTCTGTTGGCCAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LGRWCLGEQPVG*ALDRASVGQRS
Trigger: AGACCTTTGGCCAACAGAAGCTCTATCAAGTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp GCCGTGGCCAGTGGGGACTTGGTAAATTCCCTGATTTaGGTAGGAAGGTGGCACTTGGTAGATGGTGTCTCG +
Preference number: 4 (lower is better)
Translates to: AVASGDLVNSLI*VGRWHLVDGVS
Trigger: CGAGACACCATCTACCAAGTGCCACCTTCCTACCAAAATCAGGGAATTTACCAAGTCCCCACTGGCCACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp CTGTGCTGTGTCAATACTAACAGATGTGAGGAGACAGACTATGGAATGGACGCTGTTCTGAGAGCCCACTaGCTGTCCGAGTTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: LCCVNTNRCEETDYGMDAVLRAH*LSELRG
Trigger: CCCCCGCAACTCGGACAGTCAGTGGGCTCTCAGAAC...AGCGTCCATTCCATAGTCTGTCTCCTCACATCTGTTAGTATTGACACAGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GCAGGTTGGAGGAATGTCATAAACCCCCTCCGGTCTGAGGTCCGGCCTTCCAGCAACTTCAAGCGTTGTTaGTTTTCAGCAACCCTCTTC +
Preference number: 4 (lower is better)
Translates to: AGWRNVINPLRSEVRPSSNFKRC*FSATLF
Trigger: GAAGAGGGTTGCTGAAAATCAACAACGCTTGAAGTT...GCTGGAAGGCCGGACCTCAGACCGGAGGGGGTTTATGACATTCCTCCAACCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp AGTTCCGGGAGGCAGGCAGCATTTGCAACAGCTCCCTTGACAAAGTGGAGGTACTTTTGCCCCAAGGAATaGTGCAGCTCTGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: SSGRQAAFATAPLTKWRYFCPKE*CSSGCW
Trigger: CCAACATCCAGAGCTGCATCATTCCTTGGGGCAAAA...GTACCTCCACTTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGCCTCCCGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTGACAGCATTAAGCACTaGGGTGCCCGCCCCTCCATT +
Preference number: 4 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCDSIKH*GARPSI
Trigger: AATGGAGGGGCGGGCACCGCAGTGCTTAATGCTGTC...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000620854.4
CDS-3UTR GCA 90 bp AACAGTGCCCTATCAGCCATGCATGGTAGTGTTGGGCAAGAGAGGGATCCAAGACTGGAGGCAGTCTCCTaGATGGGACCAATCAGAAGC +
Preference number: 4 (lower is better)
Translates to: NSALSAMHGSVGQERDPRLEAVS*MGPIRS
Trigger: GCTTCTGATTGGTCCCATGCAGGAGACTGCCTCCAG...TCTTGGATCCCTCTCTTGCCCAACACTACCATGCATGGCTGATAGGGCACTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp ATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGCTGGAGGCAGTCTCCTaGATGGGACCAATCAGAAGC +
Preference number: 4 (lower is better)
Translates to: MIKDLASFPQVMGVVAPKLEAVS*MGPIRS
Trigger: GCTTCTGATTGGTCCCATGCAGGAGACTGCCTCCAG...CTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR GCA 90 bp AAGGCCTCTACTTGCAACTGGCGGATCAAACCATTCCCCTATTTTGGTGAACAAGGGGACAGGCTCTGGTaGCTTCGAGCCACCGGTTCT +
Preference number: 4 (lower is better)
Translates to: KASTCNWRIKPFPYFGEQGDRLW*LRATGS
Trigger: AGAACCGGTGGCTCGAAGGCACCAGAGCCTGTCCCC...TTGTTCACCAAAATAGGGGAATGGTTTGATCCGCCAGTTGCAAGTAGAGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp AGTTCCGGGAGGCAGGCAGCATTTGCAACAGCTCCCTTGACAAAGTGGAGGTACTCTGAAGAGGGCCTCTaGGTTGGTGTTGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: SSGRQAAFATAPLTKWRYSEEGL*VGVDGC
Trigger: ACAACCATCAACACCAACGCAGAGGCCCTCTTCAGA...GTACCTCCACTTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGCCTCCCGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTATTGTGGTCACCAGGATaGAGCAGCTGTCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVLWSPG*SSCPWE
Trigger: CTCCCAGGGACAGCTGCTGCATCCTGGTGACCACAA...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp ATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATCAGGCCTGGGGGCAGTaGCTTGTTGTGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: IYILKFAPQEGFWALGHHQAWGQ*LVVGLG
Trigger: GCCCAGGCCCACAACAAGGCACTGCCCCCAGGCCTG...ATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp ATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATCCTGCAGGGCCGTGGTaGTGGGGTAATGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: IYILKFAPQEGFWALGHHPAGPW*WGNGGR
Trigger: CCGCCCTCCATTACCCCAGCACCACGGCCCTGCAGG...ATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TGCAGCTCCCGCTTCATCTTGTTGTGGAGGATGAGTTCCGGGAGGCAGGCAGCAGGCTTGTGGTGTCTGTaGTGTGTCAATACTAACAGA +
Preference number: 4 (lower is better)
Translates to: CSSRFILLWRMSSGRQAAGLWCL*CVNTNR
Trigger: TCTGTTAGTATTGACACAGCACAGACACCACAAGCC...TGCTGCCTGCCTCCCGGAACTCATCCTCCACAACAAGATGAAGCGGGAGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp AAGGCCTCTACTTGCAACTGGCGGATCAAACCATTCCCCTATTTTGGTGAACAAGCTGGTGGATCATCTTaGCTCCCCGACGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: KASTCNWRIKPFPYFGEQAGGSS*LPDALA
Trigger: GGCCAGAGCGTCGGGGAGGCAAGATGATCCACCAGC...TTGTTCACCAAAATAGGGGAATGGTTTGATCCGCCAGTTGCAAGTAGAGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp GTGGGTTTGGCACTTGATAGAGCTTCTGTTGGCCAAAGGTCTGCTGCATCAGTCTCGGGGAGCAGCCTGTaGGTTTGGCACTTGATAGAG +
Preference number: 4 (lower is better)
Translates to: VGLALDRASVGQRSAASVSGSSL*VWHLIE
Trigger: CTCTATCAAGTGCCAAACCCACAGGCTGCTCCCCGA...GACTGATGCAGCAGACCTTTGGCCAACAGAAGCTCTATCAAGTGCCAAACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGGGTGCCGTGGCCAGTaGGGACTTGGTAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVGCRGQ*GLGKFP
Trigger: AGGGAATTTACCAAGTCCCCACTGGCCACGGCACCC...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CCA 90 bp GCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAATCCGAGTTGCGGGGGTaGGTGATTCGGGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: APGRQLLSFYCSCLSVLKSELRG*VIRGQA
Trigger: AGCCTGTCCCCGAATCACCCACCCCCGCAACTCGGA...TTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGCTCCTTGCTCAGGCCTaGGGGCAGTGCCTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLLLAQA*GQCLVV
Trigger: CACAACAAGGCACTGCCCCCAGGCCTGAGCAAGGAG...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCGCCACTGTTTGTGGTaGGTAGGCTCTGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCRHCLW*VGSERA
Trigger: AGCCCTCTCAGAGCCTACCCACCACAAACAGTGGCG...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTAAGATTCGCGGGGGCTaGGCTGAGCTGACACAACTG +
Preference number: 4 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCKIRGG*AELTQL
Trigger: CAGTTGTGTCAGCTCAGCCCAGCCCCCGCGAATCTT...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTCGCTCTGGCCCTCTCTaGGCAGGCGGGCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSRSGPL*AGGREV
Trigger: CACCTCCCGCCCGCCTGCCCAGAGAGGGCCAGAGCG...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CCA 90 bp GCAGGCAGCATTTGCAACAGCTCCCTTGACAAAGTGGAGGTACTCCTTCAGGAATACTTTTTACCCACGTaGGGCCCACTGGTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: AGSICNSSLDKVEVLLQEYFLPT*GPLVPP
Trigger: TGGGGGAACCAGTGGGCCCCACGTGGGTAAAAAGTA...TTCCTGAAGGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp GTAGAAGAATGCACCCCAAGTTGGGTGAAGCCACTATaGGCAGGCAAGGAGGGCTGCTGGATGGTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VEECTPSWVKPL*AGKEGCWMVSF
Trigger: AAAGGAAACCATCCAGCAGCCCTCCTTGCCTGCCAATAGTGGCTTCACCCAACTTGGGGTGCATTCTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR CAA 72 bp AACCGGTCCAGATCGTCACACTTGTTCTGGGGCTTGTaGATGGCCAAGATATTCAGGGACCAGCTGCACTCA +
Preference number: 4 (lower is better)
Translates to: NRSRSSHLFWGL*MAKIFRDQLHS
Trigger: TGAGTGCAGCTGGTCCCTGAATATCTTGGCCATCAACAAGCCCCAGAACAAGTGTGACGATCTGGACCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp ACAAACCGGTCCAGATCGTCACACTTGTTCTGGGGCTaGTTGATGGCCAAGATATTCAGGGACCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: TNRSRSSHLFWG*LMAKIFRDQLH
Trigger: GTGCAGCTGGTCCCTGAATATCTTGGCCATCAACAAGCCCCAGAACAAGTGTGACGATCTGGACCGGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp GCCATGACTATGGTCTTGAGCTGCTCGCAGAGCTGGTaGCTGGAGTTCATGACTTTGTTGCGAATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: AMTMVLSCSQSW*LEFMTLLRMSW
Trigger: CCAGGACATTCGCAACAAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCAGCTCAAGACCATAGTCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp TCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCCAAATGCTTCTCTGCACTaGTGGTGGCACCTGATATAC +
Preference number: 4 (lower is better)
Translates to: SISTDALHAHTSVPSSMPNASLH*WWHLIY
Trigger: GTATATCAGGTGCCACCATCAGTGCAGAGAAGCATT...TGGCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR TCA 90 bp TCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCCATTAAGCAAGATGGCGTaGGGTCTGCCACTACAGAAT +
Preference number: 4 (lower is better)
Translates to: SISTDALHAHTSVPSSMPLSKMA*GLPLQN
Trigger: ATTCTGTAGTGGCAGACCTCACGCCATCTTGCTTAA...TGGCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR TCA 90 bp CACATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATAAACCCCCTCCGGTCTaGGGTCCGGCCTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: HIYILKFAPQEGFWALGHKPPPV*GPAFQL
Trigger: AAGCTGGAAGGCCGGACCTCAGACCGGAGGGGGTTT...ATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGGGTGGCTCAAGAAACTaGACGCCTCGGGGGACATCA +
Preference number: 4 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKGGSRN*TPRGTS
Trigger: TGATGTCCCCCGAGGCGTTCAGTTTCTTGAGCCACC...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAAAGAGCCTTTTGTCCTaGGCTGGGGAGGCTGACAGT +
Preference number: 4 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVKSLLS*AGEADS
Trigger: ACTGTCAGCCTCCCCAGCTCAGGACAAAAGGCTCTT...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTAAGAGCCTTTTGTCCTaGGCTGGGGAGGCTGACAGT +
Preference number: 4 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCKSLLS*AGEADS
Trigger: ACTGTCAGCCTCCCCAGCTCAGGACAAAAGGCTCTT...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGGCCTGCTGGAGCCGCTaGAGTCTCTCAATAGCTGTG +
Preference number: 4 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLACWSR*SLSIAV
Trigger: CACAGCTATTGAGAGACTTCAGCGGCTCCAGCAGGC...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp TTTTCCCTAAGCCCTGCTTCATCCCGGCAAGCAGAGGGCGGAATGGCATATACCCGCTGTGACTATCTGTaGGATAGTGGAAGGGGTTAT +
Preference number: 4 (lower is better)
Translates to: FSLSPASSRQAEGGMAYTRCDYL*DSGRGY
Trigger: ATAACCCCTTCCACTATCTCACAGATAGTCACAGCG...GGTATATGCCATTCCGCCCTCTGCTTGCCGGGATGAAGCAGGGCTTAGGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTCCTCTTGTTCTTGGGTaGCGTGGCCAGTGGGGACTT +
Preference number: 4 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVPLVLG*RGQWGL
Trigger: AAGTCCCCACTGGCCACGGCACCCAAGAACAAGAGG...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR GCA 90 bp ACCCCAAGTTGGGTGAAGCCACTATTGGCAGGCAAGGAGGGCTGCTGGATGGTTATGGAATCAGATGTATaGTTGCCTATGAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TPSWVKPLLAGKEGCWMVMESDV*LPMRLA
Trigger: TGCCAGCCTCATAGGCAAGCATACATCTGATTCCAT...AACCATCCAGCAGCCCTCCTTGCCTGCCAATAGTGGCTTCACCCAACTTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp CATGACTATGGTCTTGAGCTGCTCGCAGAGCTGGTTGCTGGAGTTCATGACTTTTCGAGCCACCGGTTCTaGAGCTCCTGGAATGTCACA +
Preference number: 4 (lower is better)
Translates to: HDYGLELLAELVAGVHDFSSHRF*SSWNVT
Trigger: TGTGACATTCCAGGAGCTGCAGAACCGGTGGCTCGA...AAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCAGCTCAAGACCATAGTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTATCGGGGGACATCATATaGGTCGTTCTGAGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVSGDII*VVLRAH
Trigger: GTGGGCTCTCAGAACGACGCATATGATGTCCCCCGA...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAATCGGGCACCGTCTTTaGCACCATCACAAACCGGTC +
Preference number: 4 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSIGHRL*HHHKPV
Trigger: GACCGGTTTGTGATGGTGGCAAAGACGGTGCCCGAT...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATACTATGGTCTTGAGCTaGTCGCAGAGCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNTMVLS*SQSWLL
Trigger: CAGCAACCAGCTCTGCGAGCAGCTCAAGACCATAGT...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTCCTGCAGGGCCGTGGTaGTGGGGTAATGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTPAGPW*WGNGGR
Trigger: CCGCCCTCCATTACCCCAGCACCACGGCCCTGCAGG...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp AGTTCCGGGAGGCAGGCAGCATTTGCAACAGCTCCCTTGACAAAGTGGAGGTACAGAAAGGCCTCTACTTaGAACTGGCGGATCAAACCA +
Preference number: 4 (lower is better)
Translates to: SSGRQAAFATAPLTKWRYRKAST*NWRIKP
Trigger: TGGTTTGATCCGCCAGTTGCAAGTAGAGGCCTTTCT...GTACCTCCACTTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGCCTCCCGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp AAGGCCTCTACTTGCAACTGGCGGATCAAACCATTCCCCTATTTTGGTGAACAACCACGTGGGGCCCACTaGTTCCCCCAATGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KASTCNWRIKPFPYFGEQPRGAH*FPQCFS
Trigger: AGAGAAGCATTGGGGGAACCAGTGGGCCCCACGTGG...TTGTTCACCAAAATAGGGGAATGGTTTGATCCGCCAGTTGCAAGTAGAGGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CCA 90 bp AACAGTGCCCTATCAGCCATGCATGGTAGTGTTGGGCAAGAGAGGGATCCAAGATCTGAAACTGGTGCCTaGGAGGCTGTGCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: NSALSAMHGSVGQERDPRSETGA*EAVLGF
Trigger: AAAACCCAGCACAGCCTCCCAGGCACCAGTTTCAGA...TCTTGGATCCCTCTCTTGCCCAACACTACCATGCATGGCTGATAGGGCACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp TCCTTCCAGTCCCCCTGTGTTCTGCTCTATGACGGTCAGGATGTCTCCCTTGCGCTTTTGGTATCTGGATaGGTACTCGTATACGTAGCC +
Preference number: 4 (lower is better)
Translates to: SFQSPCVLLYDGQDVSLALLVSG*VLVYVA
Trigger: GGCTACGTATACGAGTACCCATCCAGATACCAAAAG...CGCAAGGGAGACATCCTGACCGTCATAGAGCAGAACACAGGGGGACTGGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAAGGAGGTGGAAGACGTaGACATGTTACTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVRRWKT*TCYSGC
Trigger: GCACCCGGAGTAACATGTCCACGTCTTCCACCTCCT...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCACCAGTGCCATTAGGCTaGAGACACCCATCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSPVPLG*RHPSQG
Trigger: CCCTTGAGATGGGTGTCTCCAGCCTAATGGCACTGG...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CACAAATGCAGAAGATTGAACAGCCCCAGGGAGGCAATTGCTCTCCTTTTATTGGGCAGTGCCTTGTTGTaGGCCTGGGCCTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: HKCRRLNSPREAIALLLLGSALL*AWALWS
Trigger: TGACCACAAGGCCCAGGCCCACAACAAGGCACTGCC...CAATAAAAGGAGAGCAATTGCCTCCCTGGGGCTGTTCAATCTTCTGCATTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTCGCCACTGTTTGTGGTaGGTAGGCTCTGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVRHCLW*VGSERA
Trigger: AGCCCTCTCAGAGCCTACCCACCACAAACAGTGGCG...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCATTGTTGCGAATGTCCTaGGCAGTCACCTGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSLLRMS*AVTCRV
Trigger: GACACGGCAGGTGACTGCCCAGGACATTCGCAACAA...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CATGACTATGGTCTTGAGCTGCTCGCAGAGCTGGTTGCTGGAGTTCATGACTTTTTGTTGCGAATGTCCTaGGCAGTCACCTGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: HDYGLELLAELVAGVHDFLLRMS*AVTCRV
Trigger: GACACGGCAGGTGACTGCCCAGGACATTCGCAACAA...AAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCAGCTCAAGACCATAGTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp ATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGAGCTGCTCGCAGAGCTaGTTGCTGGAGTTCATGACT +
Preference number: 4 (lower is better)
Translates to: MIKDLASFPQVMGVVAPKSCSQS*LLEFMT
Trigger: AGTCATGAACTCCAGCAACCAGCTCTGCGAGCAGCT...CTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTGCAGGGCCGTGGTGCTaGGGTAATGGAGGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTAGPWC*GNGGRP
Trigger: TGGCCGCCCTCCATTACCCCAGCACCACGGCCCTGC...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATGCCTCTACTTGCAACTaGCGGATCAAACCATTCCCC +
Preference number: 4 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNASTCN*RIKPFP
Trigger: GGGGAATGGTTTGATCCGCCAGTTGCAAGTAGAGGC...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GGAATTCAGGGGACAAGACAACAGGAACAAGACAAGCAACAGTCAATTCTTGCTGAGTGCAGCGCTAGATaGAAGCGAGAAGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: GIQGTRQQEQDKQQSILAECSAR*KREGPG
Trigger: CCCGGGACCTTCTCGCTTTCATCTAGCGCTGCACTC...AGCAAGAATTGACTGTTGCTTGTCTTGTTCCTGTTGTCTTGTCCCCTGAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR TCA 90 bp AGGGGACAAGACAACAGGAACAAGACAAGCAACAGTCAATTCTTGCTTTCTAATGAGGCAGGCTGCTCGTaGCTGGAGGCAGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RGQDNRNKTSNSQFLLSNEAGCS*LEAVSC
Trigger: GCAGGAGACTGCCTCCAGTCACGAGCAGCCTGCCTC...ATTAGAAAGCAAGAATTGACTGTTGCTTGTCTTGTTCCTGTTGTCTTGTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR TCA 90 bp TCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCCATGCCATGTCCTTGTCTaGGATGCTCTTCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SISTDALHAHTSVPSSMPCHVLV*DALLSF
Trigger: GAAAGAAAGAAGAGCATCTCAGACAAGGACATGGCA...TGGCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR TCA 90 bp TTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAATACTCTCCCACTGGAACTaGAAACACAGGGCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: FTCPMKNLMACGVCAVSILSHWN*KHRAFC
Trigger: GCAAAAGGCCCTGTGTTTTCAGTTCCAGTGGGAGAG...TATTGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGAGTTGCGGGGGTGGGTaGTTCGGGGACAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: NYQSLDPHIYSEICSARGSCGGG*FGDRLW
Trigger: CCAGAGCCTGTCCCCGAATCACCCACCCCCGCAACT...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGTCATATGCGTCGTTCTaGGAGCCCACTGACTGTCCG +
Preference number: 4 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKSYASF*EPTDCP
Trigger: CGGACAGTCAGTGGGCTCTCAGAACGACGCATATGA...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CACAAATGCAGAAGATTGAACAGCCCCAGGGAGGCAATTGCTCTCCTTTTATTGGGTGGCTCAAGAAACTaGACGCCTCGGGGGACATCA +
Preference number: 4 (lower is better)
Translates to: HKCRRLNSPREAIALLLLGGSRN*TPRGTS
Trigger: TGATGTCCCCCGAGGCGTTCAGTTTCTTGAGCCACC...CAATAAAAGGAGAGCAATTGCCTCCCTGGGGCTGTTCAATCTTCTGCATTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CTGTGCTGTGTCAATACTAACAGATGTGAGGAGACAGACTATGGAATGGACGCTGGTGGCTCAAGAAACTaGACGCCTCGGGGGACATCA +
Preference number: 4 (lower is better)
Translates to: LCCVNTNRCEETDYGMDAGGSRN*TPRGTS
Trigger: TGATGTCCCCCGAGGCGTTCAGTTTCTTGAGCCACC...AGCGTCCATTCCATAGTCTGTCTCCTCACATCTGTTAGTATTGACACAGCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp AAGGCCTCTACTTGCAACTGGCGGATCAAACCATTCCCCTATTTTGGTGAACAATCTTGTTGTGGAGGATaGGTTCCGGGAGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KASTCNWRIKPFPYFGEQSCCGG*VPGGRQ
Trigger: CTGCCTGCCTCCCGGAACTCATCCTCCACAACAAGA...TTGTTCACCAAAATAGGGGAATGGTTTGATCCGCCAGTTGCAAGTAGAGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATTCAGCGTGTCTCCAATaGACACCAGTTTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNSACLQ*TPVCVH
Trigger: GTGCACACAAACTGGTGTTCATTGGAGACACGCTGA...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTCAGGCGGGCGGGAGGTaGCAGCTAGTCCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTQAGGR*QLVLLH
Trigger: ATGCAGCAGGACTAGCTGTCACCTCCCGCCCGCCTG...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
CDS-3UTR GCA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGGGTTGCCTGGGACAATaGCTTGCCGACCGTGTAATG +
Preference number: 4 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLGCLGQ*LADRVM
Trigger: CATTACACGGTCGGCAAGGCATTGTCCCAGGCAACC...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR GCA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGCTGGAGGCAGTCTCCTaGATGGGACCAATCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKLEAVS*MGPIRS
Trigger: GCTTCTGATTGGTCCCATGCAGGAGACTGCCTCCAG...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR GCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCACACTGGTTCCCCCAATaGTTCTCTGCACTGATGGTG +
Preference number: 4 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSHWFPQ*FSALMV
Trigger: CACCATCAGTGCAGAGAAGCATTGGGGGAACCAGTG...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR GCA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTATGAAGGTCCTTCCCTaGTGGCTTGGTGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVMKVLP*WLGAGW
Trigger: CCAACCTGCACCAAGCCAGCAGGGAAGGACCTTCAT...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATGAGTCTTCAACTCGTTaGAGCTCCCGCTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNESSTR*SSRFIL
Trigger: CAAGATGAAGCGGGAGCTGCAACGAGTTGAAGACTC...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp GCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAAATGGTTGTGGTGAGCTaGTTGGCGTCATCGGGCACC +
Preference number: 4 (lower is better)
Translates to: APGRQLLSFYCSCLSVLKMVVVS*LASSGT
Trigger: GGTGCCCGATGACGCCAAGCAGCTCACCACAACCAT...TTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp AAGGCCTCTACTTGCAACTGGCGGATCAAACCATTCCCCTATTTTGGTGAACAAATGGTTGTGGTGAGCTaGTTGGCGTCATCGGGCACC +
Preference number: 4 (lower is better)
Translates to: KASTCNWRIKPFPYFGEQMVVVS*LASSGT
Trigger: GGTGCCCGATGACGCCAAGCAGCTCACCACAACCAT...TTGTTCACCAAAATAGGGGAATGGTTTGATCCGCCAGTTGCAAGTAGAGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp GGTTATACACACTGGCCACAGGAAGTTGCAAAAATTAGATGGACTCTGTGTAGCGGCCCATTCTTCAGATaGAAGCTGCCAGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: GYTHWPQEVAKIRWTLCSGPFFR*KLPGPG
Trigger: ACCCGGCCCTGGCAGCTTGCATCTGAAGAATGGGCC...GCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACAGGCCTGGGGGCAGTaGCTTGTTGTGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIQAWGQ*LVVGLG
Trigger: GCCCAGGCCCACAACAAGGCACTGCCCCCAGGCCTG...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTCAGGCCTGGGGGCAGTaGCTTGTTGTGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSQAWGQ*LVVGLG
Trigger: GCCCAGGCCCACAACAAGGCACTGCCCCCAGGCCTG...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTCAGAACCATCACTGCTaGTACAGTCAGGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVQNHHC*YSQGPA
Trigger: AGCAGGCCCCTGACTGTAGCAGCAGTGATGGTTCTG...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCATCTCAGAACCATCACTaGTGCTACAGTCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSSQNHH*CYSQGP
Trigger: AGGCCCCTGACTGTAGCAGCAGTGATGGTTCTGAGA...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTGACAAACTTGCTGTGTaGCACGAAGATTCGCGGGGG +
Preference number: 4 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVDKLAV*HEDSRG
Trigger: CCCCCGCGAATCTTCGTGGCACACAGCAAGTTTGTC...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAGGCGGCCATCTTGGTTaGCATGACTATGGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSGGHLG*HDYGLE
Trigger: CTCAAGACCATAGTCATGGCAACCAAGATGGCCGCC...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACCTGCAGGGCCGTGGTaGTGGGGTAATGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIPAGPW*WGNGGR
Trigger: CCGCCCTCCATTACCCCAGCACCACGGCCCTGCAGG...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp CAGCCTGTGGGTTTGGCACTTGATAGAGCTTCTGTTGGCCAAAGGTCTGCTGCATTCTTCTCAGAACGTTaGCATCTCCAGCAAAGAGCG +
Preference number: 4 (lower is better)
Translates to: QPVGLALDRASVGQRSAAFFSER*HLQQRA
Trigger: CGCTCTTTGCTGGAGATGGCAACGTTCTGAGAAGAA...TGCAGCAGACCTTTGGCCAACAGAAGCTCTATCAAGTGCCAAACCCACAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp GTGGGTTTGGCACTTGATAGAGCTTCTGTTGGCCAAAGGTCTGCTGCATCAGTCTCCCAGATTTGGGAGTaGCAGGCTCAGAATCATCAC +
Preference number: 4 (lower is better)
Translates to: VGLALDRASVGQRSAASVSQIWE*QAQNHH
Trigger: GTGATGATTCTGAGCCTGGCACTCCCAAATCTGGGA...GACTGATGCAGCAGACCTTTGGCCAACAGAAGCTCTATCAAGTGCCAAACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAATGTTTCCCTCTCCATaGAGCGAGCGGACTTGCTTC +
Preference number: 4 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSMFPSP*SERTCF
Trigger: GAAGCAAGTCCGCTCGCTGCATGGAGAGGGAAACAT...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp CCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAACAATTCGGGGACAGGCTCTaGTGCCTTCGAGCCACCGGT +
Preference number: 4 (lower is better)
Translates to: PGRQLLSFYCSCLSVLKQFGDRL*CLRATG
Trigger: ACCGGTGGCTCGAAGGCACCAGAGCCTGTCCCCGAA...TTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CACATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATGCCTTGTTGTGGGCCTaGGCCTTGTGGTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: HIYILKFAPQEGFWALGHALLWA*ALWSPG
Trigger: TCCTGGTGACCACAAGGCCCAGGCCCACAACAAGGC...ATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAAAAGATTCGCGGGGGCTaGGCTGAGCTGACACAACTG +
Preference number: 4 (lower is better)
Translates to: APGRQLLSFYCSCLSVLKKIRGG*AELTQL
Trigger: CAGTTGTGTCAGCTCAGCCCAGCCCCCGCGAATCTT...TTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTAGCTGCTCGCAGAGCTaGTTGCTGGAGTTCATGACT +
Preference number: 4 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCSCSQS*LLEFMT
Trigger: AGTCATGAACTCCAGCAACCAGCTCTGCGAGCAGCT...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGCAGGGCCGTGGTGCTaGGGTAATGGAGGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIAGPWC*GNGGRP
Trigger: TGGCCGCCCTCCATTACCCCAGCACCACGGCCCTGC...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGCCGCAAGAGGGCTTTTaGGCACTTGGCCATCATGTG +
Preference number: 4 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKPQEGF*ALGHHV
Trigger: CACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGG...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTGAGGCAGGCTGCTCGTaGCTGGAGGCAGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSEAGCS*LEAVSC
Trigger: GCAGGAGACTGCCTCCAGTCACGAGCAGCCTGCCTC...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR TCA 90 bp ATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGAATGCTTCTCTGCACTaGTGGTGGCACCTGATATAC +
Preference number: 4 (lower is better)
Translates to: MIKDLASFPQVMGVVAPKNASLH*WWHLIY
Trigger: GTATATCAGGTGCCACCATCAGTGCAGAGAAGCATT...CTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR TCA 90 bp TGCCTGGGAGGCTGTGCTGGGTTTTCTACAGCTTCTTTGGGTAAGGGGGAACATAGCTCGTATGTGACATaGACACCTGGGTTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: CLGGCAGFSTASLGKGEHSSYVT*TPGFFL
Trigger: TAAGAAGAACCCAGGTGTTCATGTCACATACGAGCT...ATGTTCCCCCTTACCCAAAGAAGCTGTAGAAAACCCAGCACAGCCTCCCAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR TCA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTCTCTCCCACTGGAACTaGAAACACAGGGCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVLSHWN*KHRAFC
Trigger: GCAAAAGGCCCTGTGTTTTCAGTTCCAGTGGGAGAG...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAAACCCCCTCCGGTCTaGGGTCCGGCCTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDKPPPV*GPAFQL
Trigger: AAGCTGGAAGGCCGGACCTCAGACCGGAGGGGGTTT...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCAGTTGCGGGGGTGGGTaGTTCGGGGACAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFSCGGG*FGDRLW
Trigger: CCAGAGCCTGTCCCCGAATCACCCACCCCCGCAACT...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp GCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAATCATATGCGTCGTTCTaGGAGCCCACTGACTGTCCG +
Preference number: 4 (lower is better)
Translates to: APGRQLLSFYCSCLSVLKSYASF*EPTDCP
Trigger: CGGACAGTCAGTGGGCTCTCAGAACGACGCATATGA...TTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp AAGGCCTCTACTTGCAACTGGCGGATCAAACCATTCCCCTATTTTGGTGAACAAAAGAGCCTTTTGTCCTaGGCTGGGGAGGCTGACAGT +
Preference number: 4 (lower is better)
Translates to: KASTCNWRIKPFPYFGEQKSLLS*AGEADS
Trigger: ACTGTCAGCCTCCCCAGCTCAGGACAAAAGGCTCTT...TTGTTCACCAAAATAGGGGAATGGTTTGATCCGCCAGTTGCAAGTAGAGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTTTGCAACAGCTCCCTTaGCAAAGTGGAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCLQQLP*QSGGTP
Trigger: AGGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAA...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTAAGTCATGGCTGGTTTaGCTCAGGATCTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVKSWLV*LRIWWE
Trigger: CTCCCACCAGATCCTGAGTCAAACCAGCCATGACTT...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTATGTTCTGGGGCTTGTTaGTGGCCAAGATATTCAGGG +
Preference number: 4 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVCSGAC*WPRYSG
Trigger: CCCTGAATATCTTGGCCATCAACAAGCCCCAGAACA...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCATGTTCTGGGGCTTGTTaGTGGCCAAGATATTCAGGG +
Preference number: 4 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSCSGAC*WPRYSG
Trigger: CCCTGAATATCTTGGCCATCAACAAGCCCCAGAACA...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGACTCCGTTGAGTTCATaGTGCTCTCCGGCCCATTCT +
Preference number: 4 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLTPLSS*CSPAHS
Trigger: AGAATGGGCCGGAGAGCATCATGAACTCAACGGAGT...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTACTCCGTTGAGTTCATaGTGCTCTCCGGCCCATTCT +
Preference number: 4 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVTPLSS*CSPAHS
Trigger: AGAATGGGCCGGAGAGCATCATGAACTCAACGGAGT...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAAGTGTGGGTACTCCGTTaGGTTCATGATGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: APGRQLLSFYCSCLSVLKVWVLR*VHDALR
Trigger: CCGGAGAGCATCATGAACTCAACGGAGTACCCACAC...TTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCGCGGGGGCTGGGCTaGGCTGACACAACTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTSRGLG*ADTTEE
Trigger: CTCTTCAGTTGTGTCAGCTCAGCCCAGCCCCCGCGA...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGCTTCCCTCCAGCACCTaGACTATCAGAGCTTGGATC +
Preference number: 4 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKLPSST*TIRAWI
Trigger: GATCCAAGCTCTGATAGTTCAGGTGCTGGAGGGAAG...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTCAGGCGGGCGGGAGGTaGCAGCTAGTCCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSQAGGR*QLVLLH
Trigger: ATGCAGCAGGACTAGCTGTCACCTCCCGCCCGCCTG...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
CDS-3UTR GCA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGTGTTGGCCAAAGGTCTaGTGCATCAGTCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLCWPKV*CISPEA
Trigger: TGCCTCTGGACTGATGCAGCAGACCTTTGGCCAACA...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR GCA 90 bp TCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCCAGGGGTTACTGTTTTCTaGTGTTCGTATCAGTATTGG +
Preference number: 4 (lower is better)
Translates to: SISTDALHAHTSVPSSMPGVTVF*CSYQYW
Trigger: CCAATACTGATACGAACAGCAGAAAACAGTAACCCC...TGGCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp TCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCCAGAAGGAACATACGATTaGTTTAGTTCTGGGGATGTG +
Preference number: 4 (lower is better)
Translates to: SISTDALHAHTSVPSSMPEGTYD*FSSGDV
Trigger: CACATCCCCAGAACTAAAGCAATCGTATGTTCCTTC...TGGCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTATTTTTCCCTAAGCCCTaGTTCATCCCGGCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVFFPKP*FIPASR
Trigger: TCTGCTTGCCGGGATGAAGCAGGGCTTAGGGAAAAA...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CACAAATGCAGAAGATTGAACAGCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTCGGGGGACATCATATaGGTCGTTCTGAGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: HKCRRLNSPREAIALLLLSGDII*VVLRAH
Trigger: GTGGGCTCTCAGAACGACGCATATGATGTCCCCCGA...CAATAAAAGGAGAGCAATTGCCTCCCTGGGGCTGTTCAATCTTCTGCATTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TCAGATGTATGCTTGCCTATGAGGCTGGCAGAAGGAAACAAAATTCTCTCTGGAATGGTTGTGGTGAGCTaGTTGGCGTCATCGGGCACC +
Preference number: 4 (lower is better)
Translates to: SDVCLPMRLAEGNKILSGMVVVS*LASSGT
Trigger: GGTGCCCGATGACGCCAAGCAGCTCACCACAACCAT...TCCAGAGAGAATTTTGTTTCCTTCTGCCAGCCTCATAGGCAAGCATACATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp AAGGCCTCTACTTGCAACTGGCGGATCAAACCATTCCCCTATTTTGGTGAACAAGACAAACTTGCTGTGTaGCACGAAGATTCGCGGGGG +
Preference number: 4 (lower is better)
Translates to: KASTCNWRIKPFPYFGEQDKLAV*HEDSRG
Trigger: CCCCCGCGAATCTTCGTGGCACACAGCAAGTTTGTC...TTGTTCACCAAAATAGGGGAATGGTTTGATCCGCCAGTTGCAAGTAGAGGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGACTATGGTCTTGAGCTaGTCGCAGAGCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKTMVLS*SQSWLL
Trigger: CAGCAACCAGCTCTGCGAGCAGCTCAAGACCATAGT...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGGGCGGCCATCTTGGTTaGCATGACTATGGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKGGHLG*HDYGLE
Trigger: CTCAAGACCATAGTCATGGCAACCAAGATGGCCGCC...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATTGGTGCACCATTTCCTaGAGGGCCGTGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDWCTIS*RAVVLG
Trigger: CCCCAGCACCACGGCCCTGCAGGAAATGGTGCACCA...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATGCTGGTGGATCATCTTaGCTCCCCGACGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDAGGSS*LPDALA
Trigger: GGCCAGAGCGTCGGGGAGGCAAGATGATCCACCAGC...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CCA 90 bp CTGAATGCCTTTCCCCCACCAAGCCCTTCCCAAACAGATAATATGTCTCTATCCTCATTTCGGCAGCGGTaGGTTGAGCCGTTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: LNAFPPPSPSQTDNMSLSSFRQR*VEPFSY
Trigger: GTAGGAAAACGGCTCAACCCACCGCTGCCGAAATGA...GGATAGAGACATATTATCTGTTTGGGAAGGGCTTGGTGGGGGAAAGGCATTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp TCAGATGTATGCTTGCCTATGAGGCTGGCAGAAGGAAACAAAATTCTCTCTGGAGGGTGCCGTGGCCAGTaGGGACTTGGTAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: SDVCLPMRLAEGNKILSGGCRGQ*GLGKFP
Trigger: AGGGAATTTACCAAGTCCCCACTGGCCACGGCACCC...TCCAGAGAGAATTTTGTTTCCTTCTGCCAGCCTCATAGGCAAGCATACATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379433.5
ENST00000448183.6
CDS-3UTR CCA 90 bp CACAAATGCAGAAGATTGAACAGCCCCAGGGAGGCAATTGCTCTCCTTTTATTGCCTTCCCTGCTGGCTTaGTGCAGGTTGGAGGAATGT +
Preference number: 4 (lower is better)
Translates to: HKCRRLNSPREAIALLLLPSLLA*CRLEEC
Trigger: ACATTCCTCCAACCTGCACCAAGCCAGCAGGGAAGG...CAATAAAAGGAGAGCAATTGCCTCCCTGGGGCTGTTCAATCTTCTGCATTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGTGGGCCTGGGCCTTGTaGTCACCAGGATGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NYQSLDPHIYSEICSARGWAWAL*SPGCSS
Trigger: GCTGCTGCATCCTGGTGACCACAAGGCCCAGGCCCA...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTGGGCCTGGGCCTTGTaGTCACCAGGATGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTWAWAL*SPGCSS
Trigger: GCTGCTGCATCCTGGTGACCACAAGGCCCAGGCCCA...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp GGTTATACACACTGGCCACAGGAAGTTGCAAAAATTAGATGGACTCTGTGTAGCCGCCACTGTTTGTGGTaGGTAGGCTCTGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GYTHWPQEVAKIRWTLCSRHCLW*VGSERA
Trigger: AGCCCTCTCAGAGCCTACCCACCACAAACAGTGGCG...GCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GAGGGATATCATAGACGTCCTTTTGGTATCTGGATGGGTACTCGTATACGTAGCTCACGCCACTGTTTGTaGTGGGTAGGCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: EGYHRRPFGIWMGTRIRSSRHCL*WVGSER
Trigger: CCTCTCAGAGCCTACCCACCACAAACAGTGGCGTGA...GCTACGTATACGAGTACCCATCCAGATACCAAAAGGACGTCTATGATATCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCGCAGGGCCGTGGTGCTaGGGTAATGGAGGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVAGPWC*GNGGRP
Trigger: TGGCCGCCCTCCATTACCCCAGCACCACGGCCCTGC...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp ATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGGAACCTGATGGCTTGTaGTGTCTGTGCTGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: MIKDLASFPQVMGVVAPKEPDGL*CLCCVN
Trigger: ATTGACACAGCACAGACACCACAAGCCATCAGGTTC...CTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CACAAATGCAGAAGATTGAACAGCCCCAGGGAGGCAATTGCTCTCCTTTTATTGGTAGGATGGAACCGCTaGTGGATCATCTTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: HKCRRLNSPREAIALLLLVGWNR*WIILPP
Trigger: GGGAGGCAAGATGATCCACCAGCGGTTCCATCCTAC...CAATAAAAGGAGAGCAATTGCCTCCCTGGGGCTGTTCAATCTTCTGCATTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp GCAGGCAGCATTTGCAACAGCTCCCTTGACAAAGTGGAGGTACTCCTTCAGGAAGCCCAGAAAGGAGATTaGGCTGTTCTTGGCTTGATA +
Preference number: 4 (lower is better)
Translates to: AGSICNSSLDKVEVLLQEAQKGD*AVLGLI
Trigger: TATCAAGCCAAGAACAGCCCAATCTCCTTTCTGGGC...TTCCTGAAGGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp GTGCCAGAGGCCATGGCCCCACTGGGTCTTTTTCTGTaGCTTATTGGAAGAATTAGGTCTGAAGAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: VPEAMAPLGLFL*LIGRIRSEEGS
Trigger: ACTTCCCTCTTCAGACCTAATTCTTCCAATAAGCAACAGAAAAAGACCCAGTGGGGCCATGGCCTCTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR CAA 72 bp TTATCTCTCCCACTGGAACTGAAAACACAGGGCCTTTaGCTGATGAGGGAGGGATGTCGTATACCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: LSLPLELKTQGL*LMREGCRIPLE
Trigger: CTCAAGGGGTATACGACATCCCTCCCTCATCAGCAAAAGGCCCTGTGTTTTCAGTTCCAGTGGGAGAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp GAGGGACATCATAAACACCATCCCTTTCCTGGGGGTTaGCTTTCTCACTGGTTTCTGCTGGTGGCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: EGHHKHHPFPGG*LSHWFLLVAQE
Trigger: TTCTTGAGCCACCAGCAGAAACCAGTGAGAAAGCAAACCCCCAGGAAAGGGATGGTGTTTATGATGTCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp CTTGGGGTTACTGTTTTCTGCTGTTCGTATCAGTATTGGCATTATTACGGTTATACGATCTCGATCTCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LGVTVFCCSYQYWHYYGYTISIS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGAGATCGAGATCGT...ATAACCGTAATAATGCCAATACTGATACGAACAGCAGAAAACAGTAACCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR TCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCAAACCCCCTCCGGTCTaGGGTCCGGCCTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFKPPPV*GPAFQL
Trigger: AAGCTGGAAGGCCGGACCTCAGACCGGAGGGGGTTT...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTAGTTGCGGGGGTGGGTaGTTCGGGGACAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFSCGGG*FGDRLW
Trigger: CCAGAGCCTGTCCCCGAATCACCCACCCCCGCAACT...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCGTTCTGAGAGCCCACTaGCTGTCCGAGTTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFVLRAH*LSELRG
Trigger: CCCCCGCAACTCGGACAGTCAGTGGGCTCTCAGAAC...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTGTTCTGAGAGCCCACTaGCTGTCCGAGTTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSVLRAH*LSELRG
Trigger: CCCCCGCAACTCGGACAGTCAGTGGGCTCTCAGAAC...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTAGAAAGACAATCGGTTaGTCCCATCCACCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVRKTIG*SHPPSP
Trigger: GGGACTTGGTGGATGGGATCAACCGATTGTCTTTCT...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp TCTCCACTTAGCGTAGATCAATCAAGTCAGCCATCTCCTAAGAAATACACATTATCGCGGGGGCTGGGCTaGGCTGACACAACTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SPLSVDQSSQPSPKKYTLSRGLG*ADTTEE
Trigger: CTCTTCAGTTGTGTCAGCTCAGCCCAGCCCCCGCGA...TAATGTGTATTTCTTAGGAGATGGCTGACTTGATTGATCTACGCTAAGTGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGTCAGCGTGTCTCCAATaGACACCAGTTTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLSACLQ*TPVCVH
Trigger: GTGCACACAAACTGGTGTTCATTGGAGACACGCTGA...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CAGCCTGTGGGTTTGGCACTTGATAGAGCTTCTGTTGGCCAAAGGTCTGCTGCAGCTGTCTCTCAGTATTaGAACAACCCAATCCTAACT +
Preference number: 4 (lower is better)
Translates to: QPVGLALDRASVGQRSAAAVSQY*NNPILT
Trigger: AGTTAGGATTGGGTTGTTTCAATACTGAGAGACAGC...TGCAGCAGACCTTTGGCCAACAGAAGCTCTATCAAGTGCCAAACCCACAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAAGCTCTATAGTTCCATaGTCAAGGACCTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVSSIVP*SRTWPV
Trigger: AACTGGCCAGGTCCTTGATCATGGAACTATAGAGCT...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTGTAGCTAGCCACTCTTaGGTGTCAGGTCTGCATATG +
Preference number: 4 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVVASHS*VSGLHM
Trigger: CATATGCAGACCTGACACTCAAGAGTGGCTAGCTAC...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp GGTTATACACACTGGCCACAGGAAGTTGCAAAAATTAGATGGACTCTGTGTAGCCCTGGGACAATGCCTTaGCGACCGTGTAATGAGCAC +
Preference number: 4 (lower is better)
Translates to: GYTHWPQEVAKIRWTLCSPGTMP*RPCNEH
Trigger: GTGCTCATTACACGGTCGGCAAGGCATTGTCCCAGG...GCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR GCA 90 bp CACATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATGGTTGCCTGGGACAATaGCTTGCCGACCGTGTAATG +
Preference number: 4 (lower is better)
Translates to: HIYILKFAPQEGFWALGHGCLGQ*LADRVM
Trigger: CATTACACGGTCGGCAAGGCATTGTCCCAGGCAACC...ATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR GCA 90 bp GGAATTCAGGGGACAAGACAACAGGAACAAGACAAGCAACAGTCAATTCTTGCTTTCACGCCATTCTCCTaGCTCAGCCTTCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GIQGTRQQEQDKQQSILAFTPFS*LSLPSS
Trigger: GCTACTCGGAAGGCTGAGGCAGGAGAATGGCGTGAA...AGCAAGAATTGACTGTTGCTTGTCTTGTTCCTGTTGTCTTGTCCCCTGAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp ATCACTTGTGGTTTGACGGTCTTGATGCATCTCATCTCTTCTTCCAGCATTTTATCGCCCAGGCTGGAGTaGAGTGGTGAGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ITCGLTVLMHLISSSSILSPRLE*SGEISA
Trigger: AGCCGAGATCTCACCACTGCACTCCAGCCTGGGCGA...TAAAATGCTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGTGTTACTCCGGGTGCTaGCTGTACTGGAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKCYSGC*LYWRKT
Trigger: TGTCTTTCTCCAGTACAGGCAGCACCCGGAGTAACA...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGACATGTTACTCCGGGTaGTGCCTGTACTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLTCYSG*CLYWRK
Trigger: CTTTCTCCAGTACAGGCAGCACCCGGAGTAACATGT...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATGGCCCATTCTTCAGATaGAAGCTGCCAGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDGPFFR*KLPGPG
Trigger: ACCCGGCCCTGGCAGCTTGCATCTGAAGAATGGGCC...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACAGGCCTGGGGGCAGTaGCTTGTTGTGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLLLVICEYIYPWGRSISQAWGQ*LVVGLG
Trigger: GCCCAGGCCCACAACAAGGCACTGCCCCCAGGCCTG...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CTAAGCCCTGCTTCATCCCGGCAAGCAGAGGGCGGAATGGCATATACCCCTTTTAATAGCTCTTTCTGTTaGCTCTCAAACTCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: LSPASSRQAEGGMAYTPFNSSFC*LSNSSL
Trigger: TAAGGAGGAGTTTGAGAGGCAACAGAAAGAGCTATT...AAAAGGGGTATATGCCATTCCGCCCTCTGCTTGCCGGGATGAAGCAGGGCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGTCCTGGGCAGTCACCTaGCGTGTCAGCGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: NYQSLDPHIYSEICSARGSWAVT*RVSVSP
Trigger: TGGAGACACGCTGACACGGCAGGTGACTGCCCAGGA...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATTCCTGGGCAGTCACCTaGCGTGTCAGCGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDSWAVT*RVSVSP
Trigger: TGGAGACACGCTGACACGGCAGGTGACTGCCCAGGA...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp GCTCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTCCTGGGCAGTCACCTaGCGTGTCAGCGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: AQNHHKDVENNIITSWYVSWAVT*RVSVSP
Trigger: TGGAGACACGCTGACACGGCAGGTGACTGCCCAGGA...AACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CTGTGCTGTGTCAATACTAACAGATGTGAGGAGACAGACTATGGAATGGACGCTGGCGGCCATCTTGGTTaGCATGACTATGGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LCCVNTNRCEETDYGMDAGGHLG*HDYGLE
Trigger: CTCAAGACCATAGTCATGGCAACCAAGATGGCCGCC...AGCGTCCATTCCATAGTCTGTCTCCTCACATCTGTTAGTATTGACACAGCACAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTGGTGCACCATTTCCTaGAGGGCCGTGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSWCTIS*RAVVLG
Trigger: CCCCAGCACCACGGCCCTGCAGGAAATGGTGCACCA...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp TCTCCACTTAGCGTAGATCAATCAAGTCAGCCATCTCCTAAGAAATACACATTATGGTGCACCATTTCCTaGAGGGCCGTGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SPLSVDQSSQPSPKKYTLWCTIS*RAVVLG
Trigger: CCCCAGCACCACGGCCCTGCAGGAAATGGTGCACCA...TAATGTGTATTTCTTAGGAGATGGCTGACTTGATTGATCTACGCTAAGTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CTGAATGCCTTTCCCCCACCAAGCCCTTCCCAAACAGATAATATGTCTCTATCCAGGCAGTCTCCTGCATaGGACCAATCAGAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LNAFPPPSPSQTDNMSLSRQSPA*DQSEAS
Trigger: TGAAGCTTCTGATTGGTCCCATGCAGGAGACTGCCT...GGATAGAGACATATTATCTGTTTGGGAAGGGCTTGGTGGGGGAAAGGCATTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGCAGGCTGCTCGTGACTaGAGGCAGTCTCCTGCATGG +
Preference number: 4 (lower is better)
Translates to: NYQSLDPHIYSEICSARGQAARD*RQSPAW
Trigger: CCATGCAGGAGACTGCCTCCAGTCACGAGCAGCCTG...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATCAGGCTGCTCGTGACTaGAGGCAGTCTCCTGCATGG +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDQAARD*RQSPAW
Trigger: CCATGCAGGAGACTGCCTCCAGTCACGAGCAGCCTG...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTCCACGTGGGGCCCACTaGTTCCCCCAATGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTPRGAH*FPQCFS
Trigger: AGAGAAGCATTGGGGGAACCAGTGGGCCCCACGTGG...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CCA 90 bp GTCCCACATACAATCAAAGATAAACAGGAATTCAGGGGACAAGACAACAGGAACACCTTTTTACCCACGTaGGGCCCACTGGTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: VPHTIKDKQEFRGQDNRNTFLPT*GPLVPP
Trigger: TGGGGGAACCAGTGGGCCCCACGTGGGTAAAAAGGT...GTTCCTGTTGTCTTGTCCCCTGAATTCCTGTTTATCTTTGATTGTATGTGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATCGGTTCTGCAGCTCCTaGAATGTCACAGTTGTATTT +
Preference number: 4 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNRFCSS*NVTVVF
Trigger: AAATACAACTGTGACATTCCAGGAGCTGCAGAACCG...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCTTCGGGGACAGGCTCTaGTGCCTTCGAGCCACCGGT +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFFGDRL*CLRATG
Trigger: ACCGGTGGCTCGAAGGCACCAGAGCCTGTCCCCGAA...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTCCGAGTTGCGGGGGTaGGTGATTCGGGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSSELRG*VIRGQA
Trigger: AGCCTGTCCCCGAATCACCCACCCCCGCAACTCGGA...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp TTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAATACTCACTGGTTTCTGCTaGTGGCTCAAGAAACTGAAC +
Preference number: 4 (lower is better)
Translates to: FTCPMKNLMACGVCAVSILTGFC*WLKKLN
Trigger: GTTCAGTTTCTTGAGCCACCAGCAGAAACCAGTGAG...TATTGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAAAGAGCCTTTAGCATCTaGCGGGTTATGCAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: APGRQLLSFYCSCLSVLKRAFSI*RVMQRD
Trigger: GTCCCTCTGCATAACCCGCCAGATGCTAAAGGCTCT...TTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCTGGGCCTGGGCCTTGTaGTCACCAGGATGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFWAWAL*SPGCSS
Trigger: GCTGCTGCATCCTGGTGACCACAAGGCCCAGGCCCA...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTGCCTTGTTGTGGGCCTaGGCCTTGTGGTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTALLWA*ALWSPG
Trigger: TCCTGGTGACCACAAGGCCCAGGCCCACAACAAGGC...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATCTCCTTGCTCAGGCCTaGGGGCAGTGCCTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDLLAQA*GQCLVV
Trigger: CACAACAAGGCACTGCCCCCAGGCCTGAGCAAGGAG...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp GGTTATACACACTGGCCACAGGAAGTTGCAAAAATTAGATGGACTCTGTGTAGCTCACGCCACTGTTTGTaGTGGGTAGGCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: GYTHWPQEVAKIRWTLCSSRHCL*WVGSER
Trigger: CCTCTCAGAGCCTACCCACCACAAACAGTGGCGTGA...GCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GGTTATACACACTGGCCACAGGAAGTTGCAAAAATTAGATGGACTCTGTGTAGCCCGCAAGAGGGCTTTTaGGCACTTGGCCATCATGTG +
Preference number: 4 (lower is better)
Translates to: GYTHWPQEVAKIRWTLCSPQEGF*ALGHHV
Trigger: CACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGG...GCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR CAA 72 bp CCAAGCCCTTCCCAAACAGATAATATGTCTCTATCCTaGGAACTCCCTGAGCCAGTGATCCACACATCTCTG +
Preference number: 4 (lower is better)
Translates to: PSPSQTDNMSLS*ELPEPVIHTSL
Trigger: CAGAGATGTGTGGATCACTGGCTCAGGGAGTTCCAAGGATAGAGACATATTATCTGTTTGGGAAGGGCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR CAA 72 bp GCTGAGCTGACACAACTGAAGAGTGCGTCAATGGCGTaGAGAAGGGAAATGAAATGGGTCTCACATTGGTCA +
Preference number: 4 (lower is better)
Translates to: AELTQLKSASMA*RREMKWVSHWS
Trigger: TGACCAATGTGAGACCCATTTCATTTCCCTTCTCAACGCCATTGACGCACTCTTCAGTTGTGTCAGCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp TCTTCTCAGAACGTTGCCATCTCCAGCAAAGAGCGCTaGAACAGCTGGGCATTTCTAGAAAGGTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: SSQNVAISSKER*NSWAFLERSVT
Trigger: AGTGACAGACCTTTCTAGAAATGCCCAGCTGTTCAAGCGCTCTTTGCTGGAGATGGCAACGTTCTGAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGAGGCAGGCTGCTCGTaGCTGGAGGCAGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGEAGCS*LEAVSC
Trigger: GCAGGAGACTGCCTCCAGTCACGAGCAGCCTGCCTC...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR TCA 90 bp AACAGTGCCCTATCAGCCATGCATGGTAGTGTTGGGCAAGAGAGGGATCCAAGAACCACTCACAAGCTATaGGAACAAAGGTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: NSALSAMHGSVGQERDPRTTHKL*EQRFHS
Trigger: AGAATGGAACCTTTGTTCTCATAGCTTGTGAGTGGT...TCTTGGATCCCTCTCTTGCCCAACACTACCATGCATGGCTGATAGGGCACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR TCA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTAAACCCCCTCCGGTCTaGGGTCCGGCCTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFKPPPV*GPAFQL
Trigger: AAGCTGGAAGGCCGGACCTCAGACCGGAGGGGGTTT...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGCAGTTGTATTTTACATaGAGGTCCTTCCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKQLYFT*RSFPAG
Trigger: GCCAGCAGGGAAGGACCTTCATGTAAAATACAACTG...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCAAGTTGCGGGGGTGGGTaGTTCGGGGACAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LLLLVICEYIYPWGRSISSCGGG*FGDRLW
Trigger: CCAGAGCCTGTCCCCGAATCACCCACCCCCGCAACT...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATGGTGGCTCAAGAAACTaGACGCCTCGGGGGACATCA +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDGGSRN*TPRGTS
Trigger: TGATGTCCCCCGAGGCGTTCAGTTTCTTGAGCCACC...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp CAGCCTGTGGGTTTGGCACTTGATAGAGCTTCTGTTGGCCAAAGGTCTGCTGCATCCACATATATATTCTaGAATTTGCTCCGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: QPVGLALDRASVGQRSAASTYIF*NLLRKR
Trigger: CCTCTTGCGGAGCAAATTTCAGAATATATATGTGGA...TGCAGCAGACCTTTGGCCAACAGAAGCTCTATCAAGTGCCAAACCCACAGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp TTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAATAGGAAAACCTCATGACTaGACCACTCACAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: FTCPMKNLMACGVCAVSIGKPHD*TTHKCR
Trigger: TCTGCATTTGTGAGTGGTTCAGTCATGAGGTTTTCC...TATTGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGGACAGCATTAAGCACTaGGGTGCCCGCCCCTCCATT +
Preference number: 4 (lower is better)
Translates to: NYQSLDPHIYSEICSARGDSIKH*GARPSI
Trigger: AATGGAGGGGCGGGCACCGCAGTGCTTAATGCTGTC...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000620854.4
CDS-3UTR GCA 90 bp CCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAACAACCTGGGACAATGCCTTaGCGACCGTGTAATGAGCAC +
Preference number: 4 (lower is better)
Translates to: PGRQLLSFYCSCLSVLKQPGTMP*RPCNEH
Trigger: GTGCTCATTACACGGTCGGCAAGGCATTGTCCCAGG...TTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR GCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTGAAGCTTCACCCGGTTaGCTGGGACAATGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTEASPG*LGQCLA
Trigger: GGCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTC...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR GCA 90 bp ACCCCAAGTTGGGTGAAGCCACTATTGGCAGGCAAGGAGGGCTGCTGGATGGTTTGGGTCTTTTTCTGTTaGTTATTGGAAGAATTAGGT +
Preference number: 4 (lower is better)
Translates to: TPSWVKPLLAGKEGCWMVWVFFC*LLEELG
Trigger: ACCTAATTCTTCCAATAAGCAACAGAAAAAGACCCA...AACCATCCAGCAGCCCTCCTTGCCTGCCAATAGTGGCTTCACCCAACTTGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp CTGAATGCCTTTCCCCCACCAAGCCCTTCCCAAACAGATAATATGTCTCTATCCAGATGGCGTGAGGTCTaGCACTACAGAATAAGCTTG +
Preference number: 4 (lower is better)
Translates to: LNAFPPPSPSQTDNMSLSRWREV*HYRISL
Trigger: CAAGCTTATTCTGTAGTGGCAGACCTCACGCCATCT...GGATAGAGACATATTATCTGTTTGGGAAGGGCTTGGTGGGGGAAAGGCATTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp TCAGATGTATGCTTGCCTATGAGGCTGGCAGAAGGAAACAAAATTCTCTCTGGAACGCCCATACCTCTGTaGCTTCATCCATGCCATGTC +
Preference number: 4 (lower is better)
Translates to: SDVCLPMRLAEGNKILSGTPIPL*LHPCHV
Trigger: GACATGGCATGGATGAAGGCACAGAGGTATGGGCGT...TCCAGAGAGAATTTTGTTTCCTTCTGCCAGCCTCATAGGCAAGCATACATCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCGGGGACAGGCTCTGGTaGCTTCGAGCCACCGGTTCT +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVGDRLW*LRATGS
Trigger: AGAACCGGTGGCTCGAAGGCACCAGAGCCTGTCCCC...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTTTTCTCACTGGTTTCTaGTGGTGGCTCAAGAAACTG +
Preference number: 4 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCFLTGF*WWLKKL
Trigger: CAGTTTCTTGAGCCACCAGCAGAAACCAGTGAGAAA...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCATTTCTCACTGGTTTCTaGTGGTGGCTCAAGAAACTG +
Preference number: 4 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSFLTGF*WWLKKL
Trigger: CAGTTTCTTGAGCCACCAGCAGAAACCAGTGAGAAA...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTACTCCACCTTGTCCACTaGTGTGCGTATTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVLHLVH*CAYFID
Trigger: ATCAATGAAATACGCACAGCAGTGGACAAGGTGGAG...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp ATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATATCGGGCACCGTCTTTaGCACCATCACAAACCGGTC +
Preference number: 4 (lower is better)
Translates to: IYILKFAPQEGFWALGHHIGHRL*HHHKPV
Trigger: GACCGGTTTGTGATGGTGGCAAAGACGGTGCCCGAT...ATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp ATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATCAGAACCATCACTGCTaGTACAGTCAGGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: IYILKFAPQEGFWALGHHQNHHC*YSQGPA
Trigger: AGCAGGCCCCTGACTGTAGCAGCAGTGATGGTTCTG...ATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CACATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATTCTCAGAACCATCACTaGTGCTACAGTCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: HIYILKFAPQEGFWALGHSQNHH*CYSQGP
Trigger: AGGCCCCTGACTGTAGCAGCAGTGATGGTTCTGAGA...ATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp ATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGACAAACTTGCTGTGTaGCACGAAGATTCGCGGGGG +
Preference number: 4 (lower is better)
Translates to: IYILKFAPQEGFWALGHHDKLAV*HEDSRG
Trigger: CCCCCGCGAATCTTCGTGGCACACAGCAAGTTTGTC...ATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGTTCTTCTCAGAACGTTaGCATCTCCAGCAAAGAGCG +
Preference number: 4 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLFFSER*HLQQRA
Trigger: CGCTCTTTGCTGGAGATGGCAACGTTCTGAGAAGAA...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGTTCTTCTCAGAACGTTaGCATCTCCAGCAAAGAGCG +
Preference number: 4 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKFFSER*HLQQRA
Trigger: CGCTCTTTGCTGGAGATGGCAACGTTCTGAGAAGAA...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAACAATCGGGGAGCAGCCTGTaGGTTTGGCACTTGATAGAG +
Preference number: 4 (lower is better)
Translates to: PGRQLLSFYCSCLSVLKQSGSSL*VWHLIE
Trigger: CTCTATCAAGTGCCAAACCCACAGGCTGCTCCCCGA...TTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTGGGTGCCGTGGCCAGTaGGGACTTGGTAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTGCRGQ*GLGKFP
Trigger: AGGGAATTTACCAAGTCCCCACTGGCCACGGCACCC...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCACGTCCTTTTGGTATCTaGATGGGTACTCGTATACGT +
Preference number: 4 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSRPFGI*MGTRIR
Trigger: ACGTATACGAGTACCCATCCAGATACCAAAAGGACG...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTACGTATACCCCTTGAGTaGTATGAGAAGGAGGGATAT +
Preference number: 4 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVRIPLE*YEKEGY
Trigger: ATATCCCTCCTTCTCATACCACTCAAGGGGTATACG...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CTGTGCTGTGTCAATACTAACAGATGTGAGGAGACAGACTATGGAATGGACGCTTGGCTTGGTGCAGGTTaGAGGAATGTCATAAACCCC +
Preference number: 4 (lower is better)
Translates to: LCCVNTNRCEETDYGMDAWLGAG*RNVINP
Trigger: GGGGTTTATGACATTCCTCCAACCTGCACCAAGCCA...AGCGTCCATTCCATAGTCTGTCTCCTCACATCTGTTAGTATTGACACAGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GAGGGATATCATAGACGTCCTTTTGGTATCTGGATGGGTACTCGTATACGTAGCACTGGTTTCTGCTGGTaGCTCAAGAAACTGAACGCC +
Preference number: 4 (lower is better)
Translates to: EGYHRRPFGIWMGTRIRSTGFCW*LKKLNA
Trigger: GGCGTTCAGTTTCTTGAGCCACCAGCAGAAACCAGT...GCTACGTATACGAGTACCCATCCAGATACCAAAAGGACGTCTATGATATCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTCAATAGCTGTGTCTaGATCCAGGAAGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCLNSCV*IQEEPF
Trigger: AAAAGGCTCTTCCTGGATCCAGACACAGCTATTGAG...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTACTCAATAGCTGTGTCTaGATCCAGGAAGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVLNSCV*IQEEPF
Trigger: AAAAGGCTCTTCCTGGATCCAGACACAGCTATTGAG...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGAACACTTGCAAGGCAGTGCCTTGTTGTaGGCCTGGGCCTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: QTRISHAMPHDLEGEHLQGSALL*AWALWS
Trigger: TGACCACAAGGCCCAGGCCCACAACAAGGCACTGCC...TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCGGCAGTGCCTTGTTGTaGGCCTGGGCCTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFGSALL*AWALWS
Trigger: TGACCACAAGGCCCAGGCCCACAACAAGGCACTGCC...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCCTCCTTGCTCAGGCCTaGGGGCAGTGCCTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFLLAQA*GQCLVV
Trigger: CACAACAAGGCACTGCCCCCAGGCCTGAGCAAGGAG...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTAAGATTCGCGGGGGCTaGGCTGAGCTGACACAACTG +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTKIRGG*AELTQL
Trigger: CAGTTGTGTCAGCTCAGCCCAGCCCCCGCGAATCTT...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp CACATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATAGCTGCTCGCAGAGCTaGTTGCTGGAGTTCATGACT +
Preference number: 4 (lower is better)
Translates to: HIYILKFAPQEGFWALGHSCSQS*LLEFMT
Trigger: AGTCATGAACTCCAGCAACCAGCTCTGCGAGCAGCT...ATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTTCCTGCAGGGCCGTaGTGCTGGGGTAATGGAGGG +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSFPAGP*CWGNGG
Trigger: CCCTCCATTACCCCAGCACCACGGCCCTGCAGGAAA...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp CACATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATGCCTCTACTTGCAACTaGCGGATCAAACCATTCCCC +
Preference number: 4 (lower is better)
Translates to: HIYILKFAPQEGFWALGHASTCN*RIKPFP
Trigger: GGGGAATGGTTTGATCCGCCAGTTGCAAGTAGAGGC...ATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAAGGGGTTATACACACTaGCCACAGGAAGTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSRGYTH*PQEVAK
Trigger: TTTTGCAACTTCCTGTGGCCAGTGTGTATAACCCCT...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGGAACCTGATGGCTTGTaGTGTCTGTGCTGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLEPDGL*CLCCVN
Trigger: ATTGACACAGCACAGACACCACAAGCCATCAGGTTC...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCGAGTGCAGCGCTAGATaGAAGCGAGAAGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVECSAR*KREGPG
Trigger: CCCGGGACCTTCTCGCTTTCATCTAGCGCTGCACTC...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000620854.4
CDS-3UTR TCA 90 bp CCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAACAACTGTGTTCTGCTCTATaGCGGTCAGGATGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PGRQLLSFYCSCLSVLKQLCSAL*RSGCLP
Trigger: AGGGAGACATCCTGACCGTCATAGAGCAGAACACAG...TTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR TCA 90 bp CTGTGCTGTGTCAATACTAACAGATGTGAGGAGACAGACTATGGAATGGACGCTAATGCTTCTCTGCACTaGTGGTGGCACCTGATATAC +
Preference number: 4 (lower is better)
Translates to: LCCVNTNRCEETDYGMDANASLH*WWHLIY
Trigger: GTATATCAGGTGCCACCATCAGTGCAGAGAAGCATT...AGCGTCCATTCCATAGTCTGTCTCCTCACATCTGTTAGTATTGACACAGCACAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR TCA 90 bp AACAGTGCCCTATCAGCCATGCATGGTAGTGTTGGGCAAGAGAGGGATCCAAGAAAAATGCTCATCAGATaGGATCTTTTCAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: NSALSAMHGSVGQERDPRKMLIR*DLFSGG
Trigger: ACCTCCACTGAAAAGATCTCATCTGATGAGCATTTT...TCTTGGATCCCTCTCTTGCCCAACACTACCATGCATGGCTGATAGGGCACTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR TCA 90 bp ATCACTTGTGGTTTGACGGTCTTGATGCATCTCATCTCTTCTTCCAGCATTTTATTTTCAAGGCCCGGCTaGATGCCTTTCCCCCACCAA +
Preference number: 4 (lower is better)
Translates to: ITCGLTVLMHLISSSSILFSRPG*MPFPHQ
Trigger: TTGGTGGGGGAAAGGCATTCAGCCGGGCCTTGAAAA...TAAAATGCTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR TCA 90 bp CTGTGCTGTGTCAATACTAACAGATGTGAGGAGACAGACTATGGAATGGACGCTCAGTTGTATTTTACATaGAGGTCCTTCCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LCCVNTNRCEETDYGMDAQLYFT*RSFPAG
Trigger: GCCAGCAGGGAAGGACCTTCATGTAAAATACAACTG...AGCGTCCATTCCATAGTCTGTCTCCTCACATCTGTTAGTATTGACACAGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCATATGCGTCGTTCTaGGAGCCCACTGACTGTCCG +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTSYASF*EPTDCP
Trigger: CGGACAGTCAGTGGGCTCTCAGAACGACGCATATGA...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTAAGAGCCTTTTGTCCTaGGCTGGGGAGGCTGACAGT +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTKSLLS*AGEADS
Trigger: ACTGTCAGCCTCCCCAGCTCAGGACAAAAGGCTCTT...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCGCCTGCTGGAGCCGCTaGAGTCTCTCAATAGCTGTG +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFACWSR*SLSIAV
Trigger: CACAGCTATTGAGAGACTTCAGCGGCTCCAGCAGGC...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTCTTGTTGTGGAGGATaGGTTCCGGGAGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSSCCGG*VPGGRQ
Trigger: CTGCCTGCCTCCCGGAACTCATCCTCCACAACAAGA...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp CCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAACAAAAGTCATGGCTGGTTTaGCTCAGGATCTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PGRQLLSFYCSCLSVLKQKSWLV*LRIWWE
Trigger: CTCCCACCAGATCCTGAGTCAAACCAGCCATGACTT...TTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCGTGGTGGGTAGGCTCTaGGAGGGCTTCCACTTCGAG +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVVVGRL*EGFHFE
Trigger: CTCGAAGTGGAAGCCCTCTCAGAGCCTACCCACCAC...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGCAACTGCCGATCCTaGGCACTCACGCCACTGTTT +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDSNCRS*ALTPLF
Trigger: AAACAGTGGCGTGAGTGCTCAGGATCGGCAGTTGCT...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGAGCAACTGCCGATCCTaGGCACTCACGCCACTGTTT +
Preference number: 4 (lower is better)
Translates to: NYQSLDPHIYSEICSARGSNCRS*ALTPLF
Trigger: AAACAGTGGCGTGAGTGCTCAGGATCGGCAGTTGCT...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTTCGCGGGGGCTGGGCTaGGCTGACACAACTGAAGAG +
Preference number: 4 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGSRGLG*ADTTEE
Trigger: CTCTTCAGTTGTGTCAGCTCAGCCCAGCCCCCGCGA...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAACAACTTCCCTCCAGCACCTaGACTATCAGAGCTTGGATC +
Preference number: 4 (lower is better)
Translates to: PGRQLLSFYCSCLSVLKQLPSST*TIRAWI
Trigger: GATCCAAGCTCTGATAGTTCAGGTGCTGGAGGGAAG...TTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATCCTGGGACAATGCCTTaGCGACCGTGTAATGAGCAC +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDPGTMP*RPCNEH
Trigger: GTGCTCATTACACGGTCGGCAAGGCATTGTCCCAGG...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR GCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATGGTTGCCTGGGACAATaGCTTGCCGACCGTGTAATG +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDGCLGQ*LADRVM
Trigger: CATTACACGGTCGGCAAGGCATTGTCCCAGGCAACC...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR GCA 90 bp CTTGGGGTTACTGTTTTCTGCTGTTCGTATCAGTATTGGCATTATTACGGTTATCCTCTTGTTCTTGGGTaGCGTGGCCAGTGGGGACTT +
Preference number: 4 (lower is better)
Translates to: LGVTVFCCSYQYWHYYGYPLVLG*RGQWGL
Trigger: AAGTCCCCACTGGCCACGGCACCCAAGAACAAGAGG...ATAACCGTAATAATGCCAATACTGATACGAACAGCAGAAAACAGTAACCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCCCTCTTGTTCTTGGGTaGCGTGGCCAGTGGGGACTT +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFPLVLG*RGQWGL
Trigger: AAGTCCCCACTGGCCACGGCACCCAAGAACAAGAGG...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR GCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTATGAAGGTCCTTCCCTaGTGGCTTGGTGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTMKVLP*WLGAGW
Trigger: CCAACCTGCACCAAGCCAGCAGGGAAGGACCTTCAT...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp GCTCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTCGAGCCACCGGTTCTaGAGCTCCTGGAATGTCACA +
Preference number: 4 (lower is better)
Translates to: AQNHHKDVENNIITSWYVSSHRF*SSWNVT
Trigger: TGTGACATTCCAGGAGCTGCAGAACCGGTGGCTCGA...AACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CACATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATGAGGCAGGCAGCATTTaGAACAGCTCCCTTGACAAA +
Preference number: 4 (lower is better)
Translates to: HIYILKFAPQEGFWALGHEAGSI*NSSLDK
Trigger: TTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGCCTC...ATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATATCGGGCACCGTCTTTaGCACCATCACAAACCGGTC +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDIGHRL*HHHKPV
Trigger: GACCGGTTTGTGATGGTGGCAAAGACGGTGCCCGAT...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCATGGTTGTGGTGAGCTaGTTGGCGTCATCGGGCACC +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFMVVVS*LASSGT
Trigger: GGTGCCCGATGACGCCAAGCAGCTCACCACAACCAT...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCGGCCCATTCTTCAGATaGAAGCTGCCAGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVGPFFR*KLPGPG
Trigger: ACCCGGCCCTGGCAGCTTGCATCTGAAGAATGGGCC...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTGTGGTCACCAGGATaGAGCAGCTGTCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSLWSPG*SSCPWE
Trigger: CTCCCAGGGACAGCTGCTGCATCCTGGTGACCACAA...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATCAGAACCATCACTGCTaGTACAGTCAGGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDQNHHC*YSQGPA
Trigger: AGCAGGCCCCTGACTGTAGCAGCAGTGATGGTTCTG...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATGACAAACTTGCTGTGTaGCACGAAGATTCGCGGGGG +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDDKLAV*HEDSRG
Trigger: CCCCCGCGAATCTTCGTGGCACACAGCAAGTTTGTC...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp ATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGCTTGCAAATAAACTATaGTTCCCAGATTTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: MIKDLASFPQVMGVVAPKLANKL*FPDLGV
Trigger: CACTCCCAAATCTGGGAAGCATAGTTTATTTGCAAG...CTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CACATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATAGGCAGTCTCCTGCATaGGACCAATCAGAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: HIYILKFAPQEGFWALGHRQSPA*DQSEAS
Trigger: TGAAGCTTCTGATTGGTCCCATGCAGGAGACTGCCT...ATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTGTGGCACTTGGTAGATaGTGTCTCGGGGAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSVALGR*CLGEQP
Trigger: AGGCTGCTCCCCGAGACACCATCTACCAAGTGCCAC...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTGGGTGCCGTGGCCAGTaGGGACTTGGTAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSGCRGQ*GLGKFP
Trigger: AGGGAATTTACCAAGTCCCCACTGGCCACGGCACCC...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATTATACCTCTTGTTCTTaGGTGCCGTGGCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDYTSCS*VPWPVG
Trigger: CCCCACTGGCCACGGCACCCAAGAACAAGAGGTATA...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CCA 90 bp CAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGAACACTTGCAAACCTTTTTACCCACGTaGGGCCCACTGGTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: QTRISHAMPHDLEGEHLQTFLPT*GPLVPP
Trigger: TGGGGGAACCAGTGGGCCCCACGTGGGTAAAAAGGT...TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379446.10
CDS-3UTR CCA 90 bp AGCACTTATCACTTGTGGTTTGACGGTCTTGATGCATCTCATCTCTTCTTCCAGCCTGGGAGGCTGTGCTaGGTTTTCTACAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: STYHLWFDGLDASHLFFQPGRLC*VFYSFF
Trigger: AAAGAAGCTGTAGAAAACCCAGCACAGCCTCCCAGG...CTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGATAAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp GGAATTCAGGGGACAAGACAACAGGAACAAGACAAGCAACAGTCAATTCTTGCTGAATGCACCCCAAGTTaGGTGAAGCCACTATTGGCA +
Preference number: 4 (lower is better)
Translates to: GIQGTRQQEQDKQQSILAECTPS*VKPLLA
Trigger: TGCCAATAGTGGCTTCACCCAACTTGGGGTGCATTC...AGCAAGAATTGACTGTTGCTTGTCTTGTTCCTGTTGTCTTGTCCCCTGAATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp ATTCTCTCTGGAGGCAGAGAACATCTTTATAGGCTTCACATTATTTCTACAAATTTCGGGGACAGGCTCTaGTGCCTTCGAGCCACCGGT +
Preference number: 4 (lower is better)
Translates to: ILSGGREHLYRLHIISTNFGDRL*CLRATG
Trigger: ACCGGTGGCTCGAAGGCACCAGAGCCTGTCCCCGAA...ATTTGTAGAAATAATGTGAAGCCTATAAAGATGTTCTCTGCCTCCAGAGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CCA 90 bp CACAAATGCAGAAGATTGAACAGCCCCAGGGAGGCAATTGCTCTCCTTTTATTGCTCACTGGTTTCTGCTaGTGGCTCAAGAAACTGAAC +
Preference number: 4 (lower is better)
Translates to: HKCRRLNSPREAIALLLLLTGFC*WLKKLN
Trigger: GTTCAGTTTCTTGAGCCACCAGCAGAAACCAGTGAG...CAATAAAAGGAGAGCAATTGCCTCCCTGGGGCTGTTCAATCTTCTGCATTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGGAGGTGGAAGACGTaGACATGTTACTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDRRWKT*TCYSGC
Trigger: GCACCCGGAGTAACATGTCCACGTCTTCCACCTCCT...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTCCAGTGCCATTAGGCTaGAGACACCCATCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTPVPLG*RHPSQG
Trigger: CCCTTGAGATGGGTGTCTCCAGCCTAATGGCACTGG...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTCGCCACTGTTTGTGGTaGGTAGGCTCTGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSRHCLW*VGSERA
Trigger: AGCCCTCTCAGAGCCTACCCACCACAAACAGTGGCG...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGTTGTTGCGAATGTCCTaGGCAGTCACCTGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: NYQSLDPHIYSEICSARGLLRMS*AVTCRV
Trigger: GACACGGCAGGTGACTGCCCAGGACATTCGCAACAA...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAAGAGCGCTTGAACAGCTaGGCATTTCTAGAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: APGRQLLSFYCSCLSVLKERLNS*AFLERS
Trigger: AGACCTTTCTAGAAATGCCCAGCTGTTCAAGCGCTC...TTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp ATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGGCATACAAAAGCACGTaGACAAGTTTTCTGTACAGT +
Preference number: 4 (lower is better)
Translates to: MIKDLASFPQVMGVVAPKAYKST*TSFLYS
Trigger: ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC...CTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCCCGCAAGAGGGCTTTTaGGCACTTGGCCATCATGTG +
Preference number: 4 (lower is better)
Translates to: LLVICEYIYPWGRSISPAPQEGF*ALGHHV
Trigger: CACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGG...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAAGAACCTGATGGCTTGTaGTGTCTGTGCTGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: APGRQLLSFYCSCLSVLKEPDGL*CLCCVN
Trigger: ATTGACACAGCACAGACACCACAAGCCATCAGGTTC...TTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCGGATGGAACCGCTGGTaGATCATCTTGCCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFGWNRW*IILPPR
Trigger: TCGGGGAGGCAAGATGATCCACCAGCGGTTCCATCC...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATGTAGGATGGAACCGCTaGTGGATCATCTTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDVGWNR*WIILPP
Trigger: GGGAGGCAAGATGATCCACCAGCGGTTCCATCCTAC...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
3UTR CAA 72 bp ACAAAGTGGAGGTACTCCTTCAGGAACAGCTCCACCTaGTCCACTGCTGTGCGTATTTCATTGATGTGTCTT +
Preference number: 4 (lower is better)
Translates to: TKWRYSFRNSST*STAVRISLMCL
Trigger: AAGACACATCAATGAAATACGCACAGCAGTGGACAAGGTGGAGCTGTTCCTGAAGGAGTACCTCCACTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp AGGGGACAAGACAACAGGAACAAGACAAGCAACAGTCAATTCTTGCTTTCTAATATCCTTGGAACTCCCTaGGCCAGTGATCCACACATC +
Preference number: 4 (lower is better)
Translates to: RGQDNRNKTSNSQFLLSNILGTP*ASDPHI
Trigger: GATGTGTGGATCACTGGCTCAGGGAGTTCCAAGGAT...ATTAGAAAGCAAGAATTGACTGTTGCTTGTCTTGTTCCTGTTGTCTTGTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR TCA 90 bp GCTCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTCTCTCCCACTGGAACTaGAAACACAGGGCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: AQNHHKDVENNIITSWYVLSHWN*KHRAFC
Trigger: GCAAAAGGCCCTGTGTTTTCAGTTCCAGTGGGAGAG...AACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAAATGTCATACACCCCTTaGGGTTTTATCTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: APGRQLLSFYCSCLSVLKMSYTP*GFISPT
Trigger: AGTGGGAGAGATAAAACCTCAAGGGGTGTATGACAT...TTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATATCATATGCGTCGTTCTaGGAGCCCACTGACTGTCCG +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQISYASF*EPTDCP
Trigger: CGGACAGTCAGTGGGCTCTCAGAACGACGCATATGA...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCGCCTGCTGGAGCCGCTaGAGTCTCTCAATAGCTGTG +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVACWSR*SLSIAV
Trigger: CACAGCTATTGAGAGACTTCAGCGGCTCCAGCAGGC...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp CCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAACAATTGCAACAGCTCCCTTaGCAAAGTGGAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: PGRQLLSFYCSCLSVLKQLQQLP*QSGGTP
Trigger: AGGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAA...TTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp ATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATTGTTCTGGGGCTTGTTaGTGGCCAAGATATTCAGGG +
Preference number: 4 (lower is better)
Translates to: IYILKFAPQEGFWALGHHCSGAC*WPRYSG
Trigger: CCCTGAATATCTTGGCCATCAACAAGCCCCAGAACA...ATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTACTCCGTTGAGTTCATaGTGCTCTCCGGCCCATTCT +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTTPLSS*CSPAHS
Trigger: AGAATGGGCCGGAGAGCATCATGAACTCAACGGAGT...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTGTGTGGGTACTCCGTTaGGTTCATGATGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSVWVLR*VHDALR
Trigger: CCGGAGAGCATCATGAACTCAACGGAGTACCCACAC...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGTGGTGGGTAGGCTCTaGGAGGGCTTCCACTTCGAG +
Preference number: 4 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGVVGRL*EGFHFE
Trigger: CTCGAAGTGGAAGCCCTCTCAGAGCCTACCCACCAC...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGAACACTTGCAAAGCAACTGCCGATCCTaGGCACTCACGCCACTGTTT +
Preference number: 4 (lower is better)
Translates to: QTRISHAMPHDLEGEHLQSNCRS*ALTPLF
Trigger: AAACAGTGGCGTGAGTGCTCAGGATCGGCAGTTGCT...TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCAGCAACTGCCGATCCTaGGCACTCACGCCACTGTTT +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFSNCRS*ALTPLF
Trigger: AAACAGTGGCGTGAGTGCTCAGGATCGGCAGTTGCT...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTATTTTGGAAAACCTCATaGCTGAACCACTCACAAATG +
Preference number: 4 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVFWKTS*LNHSQM
Trigger: CATTTGTGAGTGGTTCAGTCATGAGGTTTTCCAAAA...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp TTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAATATTTTGGAAAACCTCATaGCTGAACCACTCACAAATG +
Preference number: 4 (lower is better)
Translates to: FTCPMKNLMACGVCAVSIFWKTS*LNHSQM
Trigger: CATTTGTGAGTGGTTCAGTCATGAGGTTTTCCAAAA...TATTGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GGTTATACACACTGGCCACAGGAAGTTGCAAAAATTAGATGGACTCTGTGTAGCCGCTGTGACTATCTGTaGGATAGTGGAAGGGGTTAT +
Preference number: 4 (lower is better)
Translates to: GYTHWPQEVAKIRWTLCSRCDYL*DSGRGY
Trigger: ATAACCCCTTCCACTATCTCACAGATAGTCACAGCG...GCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTGGCGTTTTACTCTTCTaGCCAGTTTCTTCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVGVLLF*PVSSFS
Trigger: TGAAAACGAAGAAACTGGTCAGAAGAGTAAAACGCC...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp CTTGGGGTTACTGTTTTCTGCTGTTCGTATCAGTATTGGCATTATTACGGTTATGGTTGCCTGGGACAATaGCTTGCCGACCGTGTAATG +
Preference number: 4 (lower is better)
Translates to: LGVTVFCCSYQYWHYYGYGCLGQ*LADRVM
Trigger: CATTACACGGTCGGCAAGGCATTGTCCCAGGCAACC...ATAACCGTAATAATGCCAATACTGATACGAACAGCAGAAAACAGTAACCCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCGAAGCTTCACCCGGTTaGCTGGGACAATGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVEASPG*LGQCLA
Trigger: GGCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTC...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR GCA 90 bp GCTCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTGTTGGCCAAAGGTCTaGTGCATCAGTCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: AQNHHKDVENNIITSWYVCWPKV*CISPEA
Trigger: TGCCTCTGGACTGATGCAGCAGACCTTTGGCCAACA...AACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR GCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATCACTGGTTCCCCCAATaGTTCTCTGCACTGATGGTG +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDHWFPQ*FSALMV
Trigger: CACCATCAGTGCAGAGAAGCATTGGGGGAACCAGTG...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR GCA 90 bp CTTGGGGTTACTGTTTTCTGCTGTTCGTATCAGTATTGGCATTATTACGGTTATTTTCCACAGATGCCCTaGACGCCCATACCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LGVTVFCCSYQYWHYYGYFPQMP*TPIPLC
Trigger: GCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAA...ATAACCGTAATAATGCCAATACTGATACGAACAGCAGAAAACAGTAACCCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATTCCCTGCTGGCTTGGTaGAGGTTGGAGGAATGTCAT +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDSLLAW*RLEECH
Trigger: ATGACATTCCTCCAACCTGCACCAAGCCAGCAGGGA...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCATGAAGGTCCTTCCCTaGTGGCTTGGTGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFMKVLP*WLGAGW
Trigger: CCAACCTGCACCAAGCCAGCAGGGAAGGACCTTCAT...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp CAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGAACACTTGCAATCGAGCCACCGGTTCTaGAGCTCCTGGAATGTCACA +
Preference number: 4 (lower is better)
Translates to: QTRISHAMPHDLEGEHLQSSHRF*SSWNVT
Trigger: TGTGACATTCCAGGAGCTGCAGAACCGGTGGCTCGA...TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTCGAGCCACCGGTTCTaGAGCTCCTGGAATGTCACA +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSSSHRF*SSWNVT
Trigger: TGTGACATTCCAGGAGCTGCAGAACCGGTGGCTCGA...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATATCGGGGGACATCATATaGGTCGTTCTGAGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQISGDII*VVLRAH
Trigger: GTGGGCTCTCAGAACGACGCATATGATGTCCCCCGA...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp GCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAATTTCTCACTGGTTTCTaGTGGTGGCTCAAGAAACTG +
Preference number: 4 (lower is better)
Translates to: APGRQLLSFYCSCLSVLKFLTGF*WWLKKL
Trigger: CAGTTTCTTGAGCCACCAGCAGAAACCAGTGAGAAA...TTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CACAAATGCAGAAGATTGAACAGCCCCAGGGAGGCAATTGCTCTCCTTTTATTGCTCCACCTTGTCCACTaGTGTGCGTATTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: HKCRRLNSPREAIALLLLLHLVH*CAYFID
Trigger: ATCAATGAAATACGCACAGCAGTGGACAAGGTGGAG...CAATAAAAGGAGAGCAATTGCCTCCCTGGGGCTGTTCAATCTTCTGCATTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp ATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGAGTCTTCAACTCGTTaGAGCTCCCGCTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: IYILKFAPQEGFWALGHHESSTR*SSRFIL
Trigger: CAAGATGAAGCGGGAGCTGCAACGAGTTGAAGACTC...ATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAATAAATAGCTCTTTCTGTTaGCTCTCAAACTCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: FTCPMKNLMACGVCAVSINSSFC*LSNSSL
Trigger: TAAGGAGGAGTTTGAGAGGCAACAGAAAGAGCTATT...TATTGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAAATAGCTCTTTCTGTTaGCTCTCAAACTCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSNSSFC*LSNSSL
Trigger: TAAGGAGGAGTTTGAGAGGCAACAGAAAGAGCTATT...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCATCCTGGGCAGTCACCTaGCGTGTCAGCGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLLLVICEYIYPWGRSISSWAVT*RVSVSP
Trigger: TGGAGACACGCTGACACGGCAGGTGACTGCCCAGGA...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGACTATGGTCTTGAGCTaGTCGCAGAGCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: NYQSLDPHIYSEICSARGTMVLS*SQSWLL
Trigger: CAGCAACCAGCTCTGCGAGCAGCTCAAGACCATAGT...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTAGGTCTGTCACTTGGTaGACCATTTCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSRSVTW*TISCRA
Trigger: GGCCCTGCAGGAAATGGTGCACCAAGTGACAGACCT...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp CACATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATAGAAAGGCCTCTACTTaGAACTGGCGGATCAAACCA +
Preference number: 4 (lower is better)
Translates to: HIYILKFAPQEGFWALGHRKAST*NWRIKP
Trigger: TGGTTTGATCCGCCAGTTGCAAGTAGAGGCCTTTCT...ATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp GCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAAGGCTTGTGGTGTCTGTaGTGTGTCAATACTAACAGA +
Preference number: 4 (lower is better)
Translates to: APGRQLLSFYCSCLSVLKGLWCL*CVNTNR
Trigger: TCTGTTAGTATTGACACAGCACAGACACCACAAGCC...TTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GCTCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTCATTTCGGCAGCGGTaGGTTGAGCCGTTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: AQNHHKDVENNIITSWYVSFRQR*VEPFSY
Trigger: GTAGGAAAACGGCTCAACCCACCGCTGCCGAAATGA...AACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000620854.4
CDS-3UTR CCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTCGGGGAGCAGCCTGTaGGTTTGGCACTTGATAGAG +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSSGSSL*VWHLIE
Trigger: CTCTATCAAGTGCCAAACCCACAGGCTGCTCCCCGA...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCGTGGCACTTGGTAGATaGTGTCTCGGGGAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVVALGR*CLGEQP
Trigger: AGGCTGCTCCCCGAGACACCATCTACCAAGTGCCAC...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCTATACCTCTTGTTCTTaGGTGCCGTGGCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFYTSCS*VPWPVG
Trigger: CCCCACTGGCCACGGCACCCAAGAACAAGAGGTATA...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCACCTTTTTACCCACGTaGGGCCCACTGGTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVTFLPT*GPLVPP
Trigger: TGGGGGAACCAGTGGGCCCCACGTGGGTAAAAAGGT...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000504387.5
CDS-3UTR CCA 90 bp GGAATTCAGGGGACAAGACAACAGGAACAAGACAAGCAACAGTCAATTCTTGCTACTTGCCCATCTCTCTaGAACACCTTTTTACCCACG +
Preference number: 4 (lower is better)
Translates to: GIQGTRQQEQDKQQSILATCPSL*NTFLPT
Trigger: CGTGGGTAAAAAGGTGTTCCAGAGAGATGGGCAAGT...AGCAAGAATTGACTGTTGCTTGTCTTGTTCCTGTTGTCTTGTCCCCTGAATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCCCTTCCCTGCTGGCTTaGTGCAGGTTGGAGGAATGT +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFPSLLA*CRLEEC
Trigger: ACATTCCTCCAACCTGCACCAAGCCAGCAGGGAAGG...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGAGCCTTTAGCATCTaGCGGGTTATGCAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDRAFSI*RVMQRD
Trigger: GTCCCTCTGCATAACCCGCCAGATGCTAAAGGCTCT...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTAGGAGGTGGAAGACGTaGACATGTTACTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSRRWKT*TCYSGC
Trigger: GCACCCGGAGTAACATGTCCACGTCTTCCACCTCCT...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp CACAAATGCAGAAGATTGAACAGCCCCAGGGAGGCAATTGCTCTCCTTTTATTGCTCAATAGCTGTGTCTaGATCCAGGAAGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: HKCRRLNSPREAIALLLLLNSCV*IQEEPF
Trigger: AAAAGGCTCTTCCTGGATCCAGACACAGCTATTGAG...CAATAAAAGGAGAGCAATTGCCTCCCTGGGGCTGTTCAATCTTCTGCATTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACCAGTGCCATTAGGCTaGAGACACCCATCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIPVPLG*RHPSQG
Trigger: CCCTTGAGATGGGTGTCTCCAGCCTAATGGCACTGG...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp CCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAACAAGCTCCCTTGACAAAGTaGAGGTACTCCTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PGRQLLSFYCSCLSVLKQAPLTK*RYSFRN
Trigger: GTTCCTGAAGGAGTACCTCCACTTTGTCAAGGGAGC...TTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCTCACGCCACTGTTTGTaGTGGGTAGGCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFSRHCL*WVGSER
Trigger: CCTCTCAGAGCCTACCCACCACAAACAGTGGCGTGA...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGCTGCTCGCAGAGCTaGTTGCTGGAGTTCATGACT +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDSCSQS*LLEFMT
Trigger: AGTCATGAACTCCAGCAACCAGCTCTGCGAGCAGCT...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTTTTCCTGCAGGGCCGTaGTGCTGGGGTAATGGAGGG +
Preference number: 4 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGFPAGP*CWGNGG
Trigger: CCCTCCATTACCCCAGCACCACGGCCCTGCAGGAAA...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GGTTATACACACTGGCCACAGGAAGTTGCAAAAATTAGATGGACTCTGTGTAGCTATGCTTCCCAGATTTaGGAGTGCCAGGCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: GYTHWPQEVAKIRWTLCSYASQI*ECQAQN
Trigger: ATTCTGAGCCTGGCACTCCCAAATCTGGGAAGCATA...GCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR CAA 72 bp GCCAGAACAGCTCAAAGCATGGAATCAGATGTATGCTaGCCTATGAGGCTGGCAGAAGGAAACAAAATTCTC +
Preference number: 4 (lower is better)
Translates to: ARTAQSMESDVC*PMRLAEGNKIL
Trigger: GAGAATTTTGTTTCCTTCTGCCAGCCTCATAGGCAAGCATACATCTGATTCCATGCTTTGAGCTGTTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379433.5
ENST00000448183.6
3UTR CAA 72 bp ATCCACACATCTCTGACAGCACTTATCACTTGTGGTTaGACGGTCTTGATGCATCTCATCTCTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: IHTSLTALITCG*TVLMHLISSSS
Trigger: GCTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGATAAGTGCTGTCAGAGATGTGTGGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR CAA 72 bp ATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTaGCAAAAATTAGATGGACTCTGTGTAGCTAGCCAC +
Preference number: 4 (lower is better)
Translates to: IVEGVIHTGHRK*QKLDGLCVASH
Trigger: GTGGCTAGCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
3UTR CAA 72 bp AGTGGTATGAGAAGGAGGGATATCATAGACGTCCTTTaGGTATCTGGATGGGTACTCGTATACGTAGCCATG +
Preference number: 4 (lower is better)
Translates to: SGMRRRDIIDVL*VSGWVLVYVAM
Trigger: CATGGCTACGTATACGAGTACCCATCCAGATACCAAAAGGACGTCTATGATATCCCTCCTTCTCATACCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp GTCCCACATACAATCAAAGATAAACAGGAATTCAGGGGACAAGACAACAGGAACACTGATGGTGGCACCTaGTATACCTCTTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VPHTIKDKQEFRGQDNRNTDGGT*YTSCSW
Trigger: CCAAGAACAAGAGGTATATCAGGTGCCACCATCAGT...GTTCCTGTTGTCTTGTCCCCTGAATTCCTGTTTATCTTTGATTGTATGTGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR TCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTCTCTCCCACTGGAACTaGAAACACAGGGCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSLSHWN*KHRAFC
Trigger: GCAAAAGGCCCTGTGTTTTCAGTTCCAGTGGGAGAG...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGAAAGACAATCGGTTaGTCCCATCCACCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDRKTIG*SHPPSP
Trigger: GGGACTTGGTGGATGGGATCAACCGATTGTCTTTCT...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCAGCCTGCTGGAGCCGCTaGAGTCTCTCAATAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LLLLVICEYIYPWGRSISACWSR*SLSIAV
Trigger: CACAGCTATTGAGAGACTTCAGCGGCTCCAGCAGGC...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATTTGCAACAGCTCCCTTaGCAAAGTGGAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDLQQLP*QSGGTP
Trigger: AGGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAA...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCATCTTGTTGTGGAGGATaGGTTCCGGGAGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LLLLVICEYIYPWGRSISSCCGG*VPGGRQ
Trigger: CTGCCTGCCTCCCGGAACTCATCCTCCACAACAAGA...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTAAGTCATGGCTGGTTTaGCTCAGGATCTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSKSWLV*LRIWWE
Trigger: CTCCCACCAGATCCTGAGTCAAACCAGCCATGACTT...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTGTTCTGGGGCTTGTTaGTGGCCAAGATATTCAGGG +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTCSGAC*WPRYSG
Trigger: CCCTGAATATCTTGGCCATCAACAAGCCCCAGAACA...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCTCAGCGTGTCTCCAATaGACACCAGTTTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: LLVICEYIYPWGRSISPASACLQ*TPVCVH
Trigger: GTGCACACAAACTGGTGTTCATTGGAGACACGCTGA...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CACATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATGGAAAACCTCATGACTaGACCACTCACAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: HIYILKFAPQEGFWALGHGKPHD*TTHKCR
Trigger: TCTGCATTTGTGAGTGGTTCAGTCATGAGGTTTTCC...ATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp ATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATAGCTCTATAGTTCCATaGTCAAGGACCTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: IYILKFAPQEGFWALGHHSSIVP*SRTWPV
Trigger: AACTGGCCAGGTCCTTGATCATGGAACTATAGAGCT...ATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GCTCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTGTAGCTAGCCACTCTTaGGTGTCAGGTCTGCATATG +
Preference number: 4 (lower is better)
Translates to: AQNHHKDVENNIITSWYVVASHS*VSGLHM
Trigger: CATATGCAGACCTGACACTCAAGAGTGGCTAGCTAC...AACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGAGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCGTAGCTAGCCACTCTTaGGTGTCAGGTCTGCATATG +
Preference number: 4 (lower is better)
Translates to: LLVICEYIYPWGRSISPAVASHS*VSGLHM
Trigger: CATATGCAGACCTGACACTCAAGAGTGGCTAGCTAC...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp ATTCTCTCTGGAGGCAGAGAACATCTTTATAGGCTTCACATTATTTCTACAAATGACAGCATTAAGCACTaGGGTGCCCGCCCCTCCATT +
Preference number: 4 (lower is better)
Translates to: ILSGGREHLYRLHIISTNDSIKH*GARPSI
Trigger: AATGGAGGGGCGGGCACCGCAGTGCTTAATGCTGTC...ATTTGTAGAAATAATGTGAAGCCTATAAAGATGTTCTCTGCCTCCAGAGAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCCTGGAGGCAGTCTCCTaGATGGGACCAATCAGAAGC +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVLEAVS*MGPIRS
Trigger: GCTTCTGATTGGTCCCATGCAGGAGACTGCCTCCAG...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR GCA 90 bp CTTGGGGTTACTGTTTTCTGCTGTTCGTATCAGTATTGGCATTATTACGGTTATCACTGGTTCCCCCAATaGTTCTCTGCACTGATGGTG +
Preference number: 4 (lower is better)
Translates to: LGVTVFCCSYQYWHYYGYHWFPQ*FSALMV
Trigger: CACCATCAGTGCAGAGAAGCATTGGGGGAACCAGTG...ATAACCGTAATAATGCCAATACTGATACGAACAGCAGAAAACAGTAACCCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp GGAATTCAGGGGACAAGACAACAGGAACAAGACAAGCAACAGTCAATTCTTGCTGAAACTGTAGAAGAATaGACCCCAAGTTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GIQGTRQQEQDKQQSILAETVEE*TPSWVK
Trigger: CTTCACCCAACTTGGGGTGCATTCTTCTACAGTTTC...AGCAAGAATTGACTGTTGCTTGTCTTGTTCCTGTTGTCTTGTCCCCTGAATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp CTTGGGGTTACTGTTTTCTGCTGTTCGTATCAGTATTGGCATTATTACGGTTATTATGGGGCAGAACAGTaGCCTATCAGCCATGCATGG +
Preference number: 4 (lower is better)
Translates to: LGVTVFCCSYQYWHYYGYYGAEQ*PISHAW
Trigger: CCATGCATGGCTGATAGGGCACTGTTCTGCCCCATA...ATAACCGTAATAATGCCAATACTGATACGAACAGCAGAAAACAGTAACCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTTTTTCCCTAAGCCCTaGTTCATCCCGGCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTFFPKP*FIPASR
Trigger: TCTGCTTGCCGGGATGAAGCAGGGCTTAGGGAAAAA...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGTTTTTCCCTAAGCCCTaGTTCATCCCGGCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: NYQSLDPHIYSEICSARGFFPKP*FIPASR
Trigger: TCTGCTTGCCGGGATGAAGCAGGGCTTAGGGAAAAA...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTATGAAGGTCCTTCCCTaGTGGCTTGGTGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFMKVLP*WLGAGW
Trigger: CCAACCTGCACCAAGCCAGCAGGGAAGGACCTTCAT...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGTGTTACTCCGGGTGCTaGCTGTACTGGAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: NYQSLDPHIYSEICSARGCYSGC*LYWRKT
Trigger: TGTCTTTCTCCAGTACAGGCAGCACCCGGAGTAACA...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACATGTTACTCCGGGTaGTGCCTGTACTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDTCYSG*CLYWRK
Trigger: CTTTCTCCAGTACAGGCAGCACCCGGAGTAACATGT...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCACATGTTACTCCGGGTaGTGCCTGTACTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LLVICEYIYPWGRSISPATCYSG*CLYWRK
Trigger: CTTTCTCCAGTACAGGCAGCACCCGGAGTAACATGT...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGGAGGCAGGCAGCATTTaGAACAGCTCCCTTGACAAA +
Preference number: 4 (lower is better)
Translates to: NYQSLDPHIYSEICSARGEAGSI*NSSLDK
Trigger: TTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGCCTC...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp GCTCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTGAGTCTTCAACTCGTTaGAGCTCCCGCTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: AQNHHKDVENNIITSWYVESSTR*SSRFIL
Trigger: CAAGATGAAGCGGGAGCTGCAACGAGTTGAAGACTC...AACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTATCGGGCACCGTCTTTaGCACCATCACAAACCGGTC +
Preference number: 4 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFIGHRL*HHHKPV
Trigger: GACCGGTTTGTGATGGTGGCAAAGACGGTGCCCGAT...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATATCTCAGAACCATCACTaGTGCTACAGTCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQISQNHH*CYSQGP
Trigger: AGGCCCCTGACTGTAGCAGCAGTGATGGTTCTGAGA...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp CCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAACAAGACACAACTGAAGAGTaGGTCAATGGCGTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PGRQLLSFYCSCLSVLKQDTTEE*VNGVEK
Trigger: CTTCTCAACGCCATTGACGCACTCTTCAGTTGTGTC...TTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTACTATGGTCTTGAGCTaGTCGCAGAGCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSTMVLS*SQSWLL
Trigger: CAGCAACCAGCTCTGCGAGCAGCTCAAGACCATAGT...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTAGGTCTGTCACTTGGTaGACCATTTCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFRSVTW*TISCRA
Trigger: GGCCCTGCAGGAAATGGTGCACCAAGTGACAGACCT...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGGCAGTCTCCTGCATaGGACCAATCAGAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDRQSPA*DQSEAS
Trigger: TGAAGCTTCTGATTGGTCCCATGCAGGAGACTGCCT...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CCA 90 bp ATTCTCTCTGGAGGCAGAGAACATCTTTATAGGCTTCACATTATTTCTACAAATGTGGCACTTGGTAGATaGTGTCTCGGGGAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ILSGGREHLYRLHIISTNVALGR*CLGEQP
Trigger: AGGCTGCTCCCCGAGACACCATCTACCAAGTGCCAC...ATTTGTAGAAATAATGTGAAGCCTATAAAGATGTTCTCTGCCTCCAGAGAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379433.5
ENST00000448183.6
CDS-3UTR CCA 90 bp TCAGATGTATGCTTGCCTATGAGGCTGGCAGAAGGAAACAAAATTCTCTCTGGAATTTTGGTAGGAAGGTaGCACTTGGTAGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: SDVCLPMRLAEGNKILSGILVGR*HLVDGV
Trigger: GACACCATCTACCAAGTGCCACCTTCCTACCAAAAT...TCCAGAGAGAATTTTGTTTCCTTCTGCCAGCCTCATAGGCAAGCATACATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379433.5
ENST00000448183.6
CDS-3UTR CCA 90 bp CACATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCGGTTCTGCAGCTCCTaGAATGTCACAGTTGTATTT +
Preference number: 4 (lower is better)
Translates to: HIYILKFAPQEGFWALGHRFCSS*NVTVVF
Trigger: AAATACAACTGTGACATTCCAGGAGCTGCAGAACCG...ATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGACTGGTTTCTGCTGGTaGCTCAAGAAACTGAACGCC +
Preference number: 4 (lower is better)
Translates to: NYQSLDPHIYSEICSARGTGFCW*LKKLNA
Trigger: GGCGTTCAGTTTCTTGAGCCACCAGCAGAAACCAGT...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTGGTTTCTGCTGGTaGCTCAAGAAACTGAACGCC +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDTGFCW*LKKLNA
Trigger: GGCGTTCAGTTTCTTGAGCCACCAGCAGAAACCAGT...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCAGAGCCTTTAGCATCTaGCGGGTTATGCAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFRAFSI*RVMQRD
Trigger: GTCCCTCTGCATAACCCGCCAGATGCTAAAGGCTCT...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp GCTCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTACTCCTTGGAGGAGGTaGAAGACGTGGACATGTTAC +
Preference number: 4 (lower is better)
Translates to: AQNHHKDVENNIITSWYVTPWRR*KTWTCY
Trigger: GTAACATGTCCACGTCTTCCACCTCCTCCAAGGAGT...AACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGAGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCACTCCTTGGAGGAGGTaGAAGACGTGGACATGTTAC +
Preference number: 4 (lower is better)
Translates to: LLVICEYIYPWGRSISPATPWRR*KTWTCY
Trigger: GTAACATGTCCACGTCTTCCACCTCCTCCAAGGAGT...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATGCTCCCTTGACAAAGTaGAGGTACTCCTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDAPLTK*RYSFRN
Trigger: GTTCCTGAAGGAGTACCTCCACTTTGTCAAGGGAGC...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTGCTCCCTTGACAAAGTaGAGGTACTCCTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTAPLTK*RYSFRN
Trigger: GTTCCTGAAGGAGTACCTCCACTTTGTCAAGGGAGC...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCTTGTTGCGAATGTCCTaGGCAGTCACCTGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVLLRMS*AVTCRV
Trigger: GACACGGCAGGTGACTGCCCAGGACATTCGCAACAA...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGCCTCTACTTGCAACTaGCGGATCAAACCATTCCCC +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIASTCN*RIKPFP
Trigger: GGGGAATGGTTTGATCCGCCAGTTGCAAGTAGAGGC...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CACATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATAGGGGTTATACACACTaGCCACAGGAAGTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: HIYILKFAPQEGFWALGHRGYTH*PQEVAK
Trigger: TTTTGCAACTTCCTGTGGCCAGTGTGTATAACCCCT...ATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CACAAATGCAGAAGATTGAACAGCCCCAGGGAGGCAATTGCTCTCCTTTTATTGGGAATGATGCAGCTCTaGATGTTGGAAAGGACAATT +
Preference number: 4 (lower is better)
Translates to: HKCRRLNSPREAIALLLLGMMQL*MLERTI
Trigger: AATTGTCCTTTCCAACATCCAGAGCTGCATCATTCC...CAATAAAAGGAGAGCAATTGCCTCCCTGGGGCTGTTCAATCTTCTGCATTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
3UTR CAA 72 bp CAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATaGAAACAACCCAATCCTAACTGTGGTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QLLSFYCSCLSV*KQPNPNCGPGL
Trigger: GAGGCCAGGACCACAGTTAGGATTGGGTTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTGATGGTGGCACCTaGTATACCTCTTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDTDGGT*YTSCSW
Trigger: CCAAGAACAAGAGGTATATCAGGTGCCACCATCAGT...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR TCA 90 bp GCTCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTCAGTTGTATTTTACATaGAGGTCCTTCCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: AQNHHKDVENNIITSWYVQLYFT*RSFPAG
Trigger: GCCAGCAGGGAAGGACCTTCATGTAAAATACAACTG...AACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGCTGTGCGTATTTCATTaGTGTGTCTTTCCATATATC +
Preference number: 4 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKLCVFH*CVFPYI
Trigger: GATATATGGAAAGACACATCAATGAAATACGCACAG...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCTTGCAACAGCTCCCTTaGCAAAGTGGAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFLQQLP*QSGGTP
Trigger: AGGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAA...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCAGTGTGGGTACTCCGTTaGGTTCATGATGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: LLLLVICEYIYPWGRSISVWVLR*VHDALR
Trigger: CCGGAGAGCATCATGAACTCAACGGAGTACCCACAC...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCTCAGCGTGTCTCCAATaGACACCAGTTTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFSACLQ*TPVCVH
Trigger: GTGCACACAAACTGGTGTTCATTGGAGACACGCTGA...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCCTTCCCTCCAGCACCTaGACTATCAGAGCTTGGATC +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVLPSST*TIRAWI
Trigger: GATCCAAGCTCTGATAGTTCAGGTGCTGGAGGGAAG...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GGTTATACACACTGGCCACAGGAAGTTGCAAAAATTAGATGGACTCTGTGTAGCGCTGTCTCTCAGTATTaGAACAACCCAATCCTAACT +
Preference number: 4 (lower is better)
Translates to: GYTHWPQEVAKIRWTLCSAVSQY*NNPILT
Trigger: AGTTAGGATTGGGTTGTTTCAATACTGAGAGACAGC...GCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTCGCTGTGACTATCTGTaGGATAGTGGAAGGGGTTAT +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTRCDYL*DSGRGY
Trigger: ATAACCCCTTCCACTATCTCACAGATAGTCACAGCG...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GGTTATACACACTGGCCACAGGAAGTTGCAAAAATTAGATGGACTCTGTGTAGCAACTTCAAGCGTTGTTaGTTTTCAGCAACCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GYTHWPQEVAKIRWTLCSNFKRC*FSATLF
Trigger: GAAGAGGGTTGCTGAAAATCAACAACGCTTGAAGTT...GCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTATGTTTGCCAGTGTCTaGCATTACGGACCTCACAGC +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSMFASV*HYGPHS
Trigger: GCTGTGAGGTCCGTAATGTCAGACACTGGCAAACAT...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
CDS-3UTR TCA 90 bp GGTTATACACACTGGCCACAGGAAGTTGCAAAAATTAGATGGACTCTGTGTAGCTGTGCAGTTGATGGTTaGTTCTCCTTGTCCACATTT +
Preference number: 4 (lower is better)
Translates to: GYTHWPQEVAKIRWTLCSCAVDG*FSLSTF
Trigger: AAATGTGGACAAGGAGAATCAACCATCAACTGCACA...GCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCTGTTGGCCAAAGGTCTaGTGCATCAGTCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVCWPKV*CISPEA
Trigger: TGCCTCTGGACTGATGCAGCAGACCTTTGGCCAACA...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR GCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCACATGTTACTCCGGGTaGTGCCTGTACTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFTCYSG*CLYWRK
Trigger: CTTTCTCCAGTACAGGCAGCACCCGGAGTAACATGT...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTGAGGCAGGCAGCATTTaGAACAGCTCCCTTGACAAA +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSEAGSI*NSSLDK
Trigger: TTTGTCAAGGGAGCTGTTGCAAATGCTGCCTGCCTC...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCTCTGAAGAGGGCCTCTaGGTTGGTGTTGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFSEEGL*VGVDGC
Trigger: ACAACCATCAACACCAACGCAGAGGCCCTCTTCAGA...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGGACACAACTGAAGAGTaGGTCAATGGCGTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: NYQSLDPHIYSEICSARGDTTEE*VNGVEK
Trigger: CTTCTCAACGCCATTGACGCACTCTTCAGTTGTGTC...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCGGCGGCCATCTTGGTTaGCATGACTATGGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVGGHLG*HDYGLE
Trigger: CTCAAGACCATAGTCATGGCAACCAAGATGGCCGCC...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATTTCTTCTCAGAACGTTaGCATCTCCAGCAAAGAGCG +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDFFSER*HLQQRA
Trigger: CGCTCTTTGCTGGAGATGGCAACGTTCTGAGAAGAA...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCCCCCAGGGAGGCAATTaGTCTCCTTTTATTGTAGCT +
Preference number: 4 (lower is better)
Translates to: LLVICEYIYPWGRSISPAPQGGN*SPFIVA
Trigger: AGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGG...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTCCCCAGGGAGGCAATTaGTCTCCTTTTATTGTAGCT +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTPQGGN*SPFIVA
Trigger: AGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGG...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCATGTTTCCCTCTCCATaGAGCGAGCGGACTTGCTTC +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVMFPSP*SERTCF
Trigger: GAAGCAAGTCCGCTCGCTGCATGGAGAGGGAAACAT...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CCA 90 bp AAATGTGTTTTTCCAAGTCTAGGAGATGAAGATATTTATCCAAGAGAAAGACGGTCGGGGAGCAGCCTGTaGGTTTGGCACTTGATAGAG +
Preference number: 4 (lower is better)
Translates to: KCVFPSLGDEDIYPRERRSGSSL*VWHLIE
Trigger: CTCTATCAAGTGCCAAACCCACAGGCTGCTCCCCGA...CCGTCTTTCTCTTGGATAAATATCTTCATCTCCTAGACTTGGAAAAACACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp AGGGGACAAGACAACAGGAACAAGACAAGCAACAGTCAATTCTTGCTTTCTAATCTCAAGACACGCCAATaGGAAACCCCAGGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: RGQDNRNKTSNSQFLLSNLKTRQ*ETPGEN
Trigger: ATTTTCTCCTGGGGTTTCCCATTGGCGTGTCTTGAG...ATTAGAAAGCAAGAATTGACTGTTGCTTGTCTTGTTCCTGTTGTCTTGTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp AGCACTTATCACTTGTGGTTTGACGGTCTTGATGCATCTCATCTCTTCTTCCAGTTTCTACAGCTTCTTTaGGTAAGGGGGAACATTGGA +
Preference number: 4 (lower is better)
Translates to: STYHLWFDGLDASHLFFQFLQLL*VRGNIG
Trigger: TCCAATGTTCCCCCTTACCCAAAGAAGCTGTAGAAA...CTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGATAAGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp CTTGGGGTTACTGTTTTCTGCTGTTCGTATCAGTATTGGCATTATTACGGTTATAGAACCCATGGGATATaGGGCAGAACAGTGCCCTAT +
Preference number: 4 (lower is better)
Translates to: LGVTVFCCSYQYWHYYGYRTHGI*GRTVPY
Trigger: ATAGGGCACTGTTCTGCCCCATATCCCATGGGTTCT...ATAACCGTAATAATGCCAATACTGATACGAACAGCAGAAAACAGTAACCCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATATGGCTTGGTGCAGGTTaGAGGAATGTCATAAACCCC +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIWLGAG*RNVINP
Trigger: GGGGTTTATGACATTCCTCCAACCTGCACCAAGCCA...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTTCCCTGCTGGCTTaGTGCAGGTTGGAGGAATGT +
Preference number: 4 (lower is better)
Translates to: LLLLVICEYIYPWGRSISPSLLA*CRLEEC
Trigger: ACATTCCTCCAACCTGCACCAAGCCAGCAGGGAAGG...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGAACACTTGCAAACTGGTTTCTGCTGGTaGCTCAAGAAACTGAACGCC +
Preference number: 4 (lower is better)
Translates to: QTRISHAMPHDLEGEHLQTGFCW*LKKLNA
Trigger: GGCGTTCAGTTTCTTGAGCCACCAGCAGAAACCAGT...TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATCTCACTGGTTTCTGCTaGTGGCTCAAGAAACTGAAC +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDLTGFC*WLKKLN
Trigger: GTTCAGTTTCTTGAGCCACCAGCAGAAACCAGTGAG...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTACTCCTTGGAGGAGGTaGAAGACGTGGACATGTTAC +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSTPWRR*KTWTCY
Trigger: GTAACATGTCCACGTCTTCCACCTCCTCCAAGGAGT...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp CAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGAACACTTGCAAGCTCCCTTGACAAAGTaGAGGTACTCCTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: QTRISHAMPHDLEGEHLQAPLTK*RYSFRN
Trigger: GTTCCTGAAGGAGTACCTCCACTTTGTCAAGGGAGC...TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATATCGTCACACTTGTTCTaGGGCTTGTTGATGGCCAAG +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQISSHLF*GLLMAK
Trigger: CTTGGCCATCAACAAGCCCCAGAACAAGTGTGACGA...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTTCACGCCACTGTTTGTaGTGGGTAGGCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGSRHCL*WVGSER
Trigger: CCTCTCAGAGCCTACCCACCACAAACAGTGGCGTGA...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATGAGCGCTTGAACAGCTaGGCATTTCTAGAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDERLNS*AFLERS
Trigger: AGACCTTTCTAGAAATGCCCAGCTGTTCAAGCGCTC...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGGAGCGCTTGAACAGCTaGGCATTTCTAGAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: NYQSLDPHIYSEICSARGERLNS*AFLERS
Trigger: AGACCTTTCTAGAAATGCCCAGCTGTTCAAGCGCTC...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GCTCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTATGCTTCCCAGATTTaGGAGTGCCAGGCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: AQNHHKDVENNIITSWYVYASQI*ECQAQN
Trigger: ATTCTGAGCCTGGCACTCCCAAATCTGGGAAGCATA...AACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCTATGCTTCCCAGATTTaGGAGTGCCAGGCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: LLVICEYIYPWGRSISPAYASQI*ECQAQN
Trigger: ATTCTGAGCCTGGCACTCCCAAATCTGGGAAGCATA...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAATCCAAGTGTAGGATaGAACCGCTGGTGGATCATC +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDNPSVG*NRWWII
Trigger: GATGATCCACCAGCGGTTCCATCCTACACTTGGATT...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
3UTR CAA 72 bp TCTTGGGGTTACTGTTTTCTGCTGTTCGTATCAGTATaGGCATTATTACGGTTATCACCAGAGCAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: SWGYCFLLFVSV*ALLRLSPEQLK
Trigger: CTTGAGCTGCTCTGGTGATAACCGTAATAATGCCAATACTGATACGAACAGCAGAAAACAGTAACCCCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR CAA 72 bp CAAACCAAAGCAGCAAATGGTAAGAGACAGTGGTCCTaGATGATCATCTGTAGAGTTCTTGGGGTTACTGTT +
Preference number: 4 (lower is better)
Translates to: QTKAANGKRQWS*MIICRVLGVTV
Trigger: AACAGTAACCCCAAGAACTCTACAGATGATCATCAAGGACCACTGTCTCTTACCATTTGCTGCTTTGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR CAA 72 bp ACCAAAGTGAATATTAAGAGTCAGAAAGGCCTCTACTaGCAACTGGCGGATCAAACCATTCCCCTATTTTGG +
Preference number: 4 (lower is better)
Translates to: TKVNIKSQKGLY*QLADQTIPLFW
Trigger: CCAAAATAGGGGAATGGTTTGATCCGCCAGTTGCAAGTAGAGGCCTTTCTGACTCTTAATATTCACTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp TCTCCACTTAGCGTAGATCAATCAAGTCAGCCATCTCCTAAGAAATACACATTAACTGATGGTGGCACCTaGTATACCTCTTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SPLSVDQSSQPSPKKYTLTDGGT*YTSCSW
Trigger: CCAAGAACAAGAGGTATATCAGGTGCCACCATCAGT...TAATGTGTATTTCTTAGGAGATGGCTGACTTGATTGATCTACGCTAAGTGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR TCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCACTGATGGTGGCACCTaGTATACCTCTTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFTDGGT*YTSCSW
Trigger: CCAAGAACAAGAGGTATATCAGGTGCCACCATCAGT...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR TCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTAATGCTTCTCTGCACTaGTGGTGGCACCTGATATAC +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSNASLH*WWHLIY
Trigger: GTATATCAGGTGCCACCATCAGTGCAGAGAAGCATT...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR TCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACAGTTGTATTTTACATaGAGGTCCTTCCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIQLYFT*RSFPAG
Trigger: GCCAGCAGGGAAGGACCTTCATGTAAAATACAACTG...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCAGAAAGACAATCGGTTaGTCCCATCCACCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVRKTIG*SHPPSP
Trigger: GGGACTTGGTGGATGGGATCAACCGATTGTCTTTCT...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCAACTCCGTTGAGTTCATaGTGCTCTCCGGCCCATTCT +
Preference number: 4 (lower is better)
Translates to: LLLLVICEYIYPWGRSISTPLSS*CSPAHS
Trigger: AGAATGGGCCGGAGAGCATCATGAACTCAACGGAGT...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAACAAGCTGTCTCTCAGTATTaGAACAACCCAATCCTAACT +
Preference number: 4 (lower is better)
Translates to: PGRQLLSFYCSCLSVLKQAVSQY*NNPILT
Trigger: AGTTAGGATTGGGTTGTTTCAATACTGAGAGACAGC...TTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCTTTTGCCCCAAGGAATaGTGCAGCTCTGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVFCPKE*CSSGCW
Trigger: CCAACATCCAGAGCTGCATCATTCCTTGGGGCAAAA...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
CDS-3UTR GCA 90 bp AAATGTGTTTTTCCAAGTCTAGGAGATGAAGATATTTATCCAAGAGAAAGACGGTGTTGGCCAAAGGTCTaGTGCATCAGTCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: KCVFPSLGDEDIYPRERRCWPKV*CISPEA
Trigger: TGCCTCTGGACTGATGCAGCAGACCTTTGGCCAACA...CCGTCTTTCTCTTGGATAAATATCTTCATCTCCTAGACTTGGAAAAACACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTTCCCTGCTGGCTTGGTaGAGGTTGGAGGAATGTCAT +
Preference number: 4 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGSLLAW*RLEECH
Trigger: ATGACATTCCTCCAACCTGCACCAAGCCAGCAGGGA...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCTGTTACTCCGGGTGCTaGCTGTACTGGAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVCYSGC*LYWRKT
Trigger: TGTCTTTCTCCAGTACAGGCAGCACCCGGAGTAACA...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCGAGTCTTCAACTCGTTaGAGCTCCCGCTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVESSTR*SSRFIL
Trigger: CAAGATGAAGCGGGAGCTGCAACGAGTTGAAGACTC...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTATTCAGGGACCAGCTaGACTCATTTAAGTCATGGC +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTYSGTS*THLSHG
Trigger: GCCATGACTTAAATGAGTGCAGCTGGTCCCTGAATA...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCTATTCAGGGACCAGCTaGACTCATTTAAGTCATGGC +
Preference number: 4 (lower is better)
Translates to: LLVICEYIYPWGRSISPAYSGTS*THLSHG
Trigger: GCCATGACTTAAATGAGTGCAGCTGGTCCCTGAATA...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCTCTGAAGAGGGCCTCTaGGTTGGTGTTGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVSEEGL*VGVDGC
Trigger: ACAACCATCAACACCAACGCAGAGGCCCTCTTCAGA...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTGACACAACTGAAGAGTaGGTCAATGGCGTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSDTTEE*VNGVEK
Trigger: CTTCTCAACGCCATTGACGCACTCTTCAGTTGTGTC...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp GCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAAAGGTGCTTACTAAGGTaGTTCGTAATTCATGGTTTT +
Preference number: 4 (lower is better)
Translates to: APGRQLLSFYCSCLSVLKRCLLR*FVIHGF
Trigger: AAAACCATGAATTACGAAGCACCTTAGTAAGCACCT...TTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp ATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATTGCAGCATTAGAAGGTaGTTACTAAGGTGCTTCGTA +
Preference number: 4 (lower is better)
Translates to: IYILKFAPQEGFWALGHHCSIRR*LLRCFV
Trigger: TACGAAGCACCTTAGTAAGCACCTTCTAATGCTGCA...ATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp AAGGCCTCTACTTGCAACTGGCGGATCAAACCATTCCCCTATTTTGGTGAACAAATATATTCTGAAATTTaGTCCGCAAGAGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: KASTCNWRIKPFPYFGEQIYSEI*SARGLL
Trigger: CAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATAT...TTGTTCACCAAAATAGGGGAATGGTTTGATCCGCCAGTTGCAAGTAGAGGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGAACACTTGCAACCCCAGGGAGGCAATTaGTCTCCTTTTATTGTAGCT +
Preference number: 4 (lower is better)
Translates to: QTRISHAMPHDLEGEHLQPQGGN*SPFIVA
Trigger: AGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGG...TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCAGAAAGGCCTCTACTTaGAACTGGCGGATCAAACCA +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFRKAST*NWRIKP
Trigger: TGGTTTGATCCGCCAGTTGCAAGTAGAGGCCTTTCT...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTGCTAGTCCTGCTGCATaGTCATGTTTCCCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFASPAA*SCFPLH
Trigger: ATGGAGAGGGAAACATGAGCATGCAGCAGGACTAGC...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCGCTAGTCCTGCTGCATaGTCATGTTTCCCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVASPAA*SCFPLH
Trigger: ATGGAGAGGGAAACATGAGCATGCAGCAGGACTAGC...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CCA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTTCATTTCGGCAGCGGTaGGTTGAGCCGTTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGSFRQR*VEPFSY
Trigger: GTAGGAAAACGGCTCAACCCACCGCTGCCGAAATGA...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000620854.4
CDS-3UTR CCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCAGGCAGTCTCCTGCATaGGACCAATCAGAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVRQSPA*DQSEAS
Trigger: TGAAGCTTCTGATTGGTCCCATGCAGGAGACTGCCT...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGCGTCCTTTTGGTATCTaGATGGGTACTCGTATACGT +
Preference number: 4 (lower is better)
Translates to: NYQSLDPHIYSEICSARGRPFGI*MGTRIR
Trigger: ACGTATACGAGTACCCATCCAGATACCAAAAGGACG...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTCGTATACCCCTTGAGTaGTATGAGAAGGAGGGATAT +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTRIPLE*YEKEGY
Trigger: ATATCCCTCCTTCTCATACCACTCAAGGGGTATACG...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATCGTATACCCCTTGAGTaGTATGAGAAGGAGGGATAT +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDRIPLE*YEKEGY
Trigger: ATATCCCTCCTTCTCATACCACTCAAGGGGTATACG...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATCGGTTCTGCAGCTCCTaGAATGTCACAGTTGTATTT +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDRFCSS*NVTVVF
Trigger: AAATACAACTGTGACATTCCAGGAGCTGCAGAACCG...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCACTCCTTGGAGGAGGTaGAAGACGTGGACATGTTAC +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVTPWRR*KTWTCY
Trigger: GTAACATGTCCACGTCTTCCACCTCCTCCAAGGAGT...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
3UTR CAA 72 bp TCTCTGACAGCACTTATCACTTGTGGTTTGACGGTCTaGATGCATCTCATCTCTTCTTCCAGCATTTTAAAG +
Preference number: 4 (lower is better)
Translates to: SLTALITCGLTV*MHLISSSSILK
Trigger: CTTTAAAATGCTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGATAAGTGCTGTCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
3UTR CAA 72 bp CTACTTGCAACTGGCGGATCAAACCATTCCCCTATTTaGGTGAACAATCATAGTCTGATACGCCTTTGTAAA +
Preference number: 4 (lower is better)
Translates to: LLATGGSNHSPI*VNNHSLIRLCK
Trigger: TTTACAAAGGCGTATCAGACTATGATTGTTCACCAAAATAGGGGAATGGTTTGATCCGCCAGTTGCAAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp TCTCCACTTAGCGTAGATCAATCAAGTCAGCCATCTCCTAAGAAATACACATTAGGAAAACCTCATGACTaGACCACTCACAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: SPLSVDQSSQPSPKKYTLGKPHD*TTHKCR
Trigger: TCTGCATTTGTGAGTGGTTCAGTCATGAGGTTTTCC...TAATGTGTATTTCTTAGGAGATGGCTGACTTGATTGATCTACGCTAAGTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp AGCACTTATCACTTGTGGTTTGACGGTCTTGATGCATCTCATCTCTTCTTCCAGAACCAAAACAAACCCTaGTTTTTACCTCAACATCAG +
Preference number: 4 (lower is better)
Translates to: STYHLWFDGLDASHLFFQNQNKP*FLPQHQ
Trigger: CTGATGTTGAGGTAAAAAGCAGGGTTTGTTTTGGTT...CTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGATAAGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR GCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCTTTCTCACTGGTTTCTaGTGGTGGCTCAAGAAACTG +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFFLTGF*WWLKKL
Trigger: CAGTTTCTTGAGCCACCAGCAGAAACCAGTGAGAAA...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTCCACCTTGTCCACTaGTGTGCGTATTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQILHLVH*CAYFID
Trigger: ATCAATGAAATACGCACAGCAGTGGACAAGGTGGAG...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATATATTCAGGGACCAGCTaGACTCATTTAAGTCATGGC +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIYSGTS*THLSHG
Trigger: GCCATGACTTAAATGAGTGCAGCTGGTCCCTGAATA...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCATCTGAAGAGGGCCTCTaGGTTGGTGTTGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: LLLLVICEYIYPWGRSISSEEGL*VGVDGC
Trigger: ACAACCATCAACACCAACGCAGAGGCCCTCTTCAGA...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTGACACAACTGAAGAGTaGGTCAATGGCGTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFDTTEE*VNGVEK
Trigger: CTTCTCAACGCCATTGACGCACTCTTCAGTTGTGTC...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCATCCCAGATTTGGGAGTaGCAGGCTCAGAATCATCAC +
Preference number: 4 (lower is better)
Translates to: LLLLVICEYIYPWGRSISSQIWE*QAQNHH
Trigger: GTGATGATTCTGAGCCTGGCACTCCCAAATCTGGGA...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp TCTCCACTTAGCGTAGATCAATCAAGTCAGCCATCTCCTAAGAAATACACATTAATTTTGGTAGGAAGGTaGCACTTGGTAGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: SPLSVDQSSQPSPKKYTLILVGR*HLVDGV
Trigger: GACACCATCTACCAAGTGCCACCTTCCTACCAAAAT...TAATGTGTATTTCTTAGGAGATGGCTGACTTGATTGATCTACGCTAAGTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAATTTTGGTAGGAAGGTaGCACTTGGTAGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIILVGR*HLVDGV
Trigger: GACACCATCTACCAAGTGCCACCTTCCTACCAAAAT...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTTTGGTATCTGGATaGGTACTCGTATACGTAGCC +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQILLVSG*VLVYVA
Trigger: GGCTACGTATACGAGTACCCATCCAGATACCAAAAG...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTCGTCCTTTTGGTATCTaGATGGGTACTCGTATACGT +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSRPFGI*MGTRIR
Trigger: ACGTATACGAGTACCCATCCAGATACCAAAAGGACG...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCCGTATACCCCTTGAGTaGTATGAGAAGGAGGGATAT +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFRIPLE*YEKEGY
Trigger: ATATCCCTCCTTCTCATACCACTCAAGGGGTATACG...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTTCGTCACACTTGTTCTaGGGCTTGTTGATGGCCAAG +
Preference number: 4 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGSSHLF*GLLMAK
Trigger: CTTGGCCATCAACAAGCCCCAGAACAAGTGTGACGA...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCATCGTCACACTTGTTCTaGGGCTTGTTGATGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LLLLVICEYIYPWGRSISSSHLF*GLLMAK
Trigger: CTTGGCCATCAACAAGCCCCAGAACAAGTGTGACGA...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp ATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGCATACAAAAGCACGTaGACAAGTTTTCTGTACAGT +
Preference number: 4 (lower is better)
Translates to: IYILKFAPQEGFWALGHHAYKST*TSFLYS
Trigger: ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC...ATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GGTTATACACACTGGCCACAGGAAGTTGCAAAAATTAGATGGACTCTGTGTAGCGAATACATTTACCCATaGGGTAGAAGTATTTCACCT +
Preference number: 4 (lower is better)
Translates to: GYTHWPQEVAKIRWTLCSEYIYP*GRSISP
Trigger: AGGTGAAATACTTCTACCCCATGGGTAAATGTATTC...GCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTAATCCAAGTGTAGGATaGAACCGCTGGTGGATCATC +
Preference number: 4 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFNPSVG*NRWWII
Trigger: GATGATCCACCAGCGGTTCCATCCTACACTTGGATT...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR TCA 90 bp GTCCCACATACAATCAAAGATAAACAGGAATTCAGGGGACAAGACAACAGGAACTCCAAGTCTAGGAGATaGAGATATTTATCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: VPHTIKDKQEFRGQDNRNSKSRR*RYLSKR
Trigger: TCTCTTGGATAAATATCTTCATCTCCTAGACTTGGA...GTTCCTGTTGTCTTGTCCCCTGAATTCCTGTTTATCTTTGATTGTATGTGGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR TCA 90 bp CTTGGGGTTACTGTTTTCTGCTGTTCGTATCAGTATTGGCATTATTACGGTTATAGATCTACGAGGCAGTaGGAATTTCAAACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LGVTVFCCSYQYWHYYGYRSTRQ*EFQTKA
Trigger: TGCTTTGGTTTGAAATTCTCACTGCCTCGTAGATCT...ATAACCGTAATAATGCCAATACTGATACGAACAGCAGAAAACAGTAACCCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR TCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCATGTCATACACCCCTTaGGGTTTTATCTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVMSYTP*GFISPT
Trigger: AGTGGGAGAGATAAAACCTCAAGGGGTGTATGACAT...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTATGTCATACACCCCTTaGGGTTTTATCTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFMSYTP*GFISPT
Trigger: AGTGGGAGAGATAAAACCTCAAGGGGTGTATGACAT...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GCTCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTCCACATATATATTCTaGAATTTGCTCCGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: AQNHHKDVENNIITSWYVSTYIF*NLLRKR
Trigger: CCTCTTGCGGAGCAAATTTCAGAATATATATGTGGA...AACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTTTTGGAAAACCTCATaGCTGAACCACTCACAAATG +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTFWKTS*LNHSQM
Trigger: CATTTGTGAGTGGTTCAGTCATGAGGTTTTCCAAAA...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGTCTCTTGGTAATATGTaGATACATTTACCCATGGGG +
Preference number: 4 (lower is better)
Translates to: NYQSLDPHIYSEICSARGSLGNM*IHLPMG
Trigger: CCCCATGGGTAAATGTATTCACATATTACCAAGAGA...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GCTCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTCTCTTGGTAATATGTaGATACATTTACCCATGGGG +
Preference number: 4 (lower is better)
Translates to: AQNHHKDVENNIITSWYVSLGNM*IHLPMG
Trigger: CCCCATGGGTAAATGTATTCACATATTACCAAGAGA...AACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCAACTTCAAGCGTTGTTaGTTTTCAGCAACCCTCTTC +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFNFKRC*FSATLF
Trigger: GAAGAGGGTTGCTGAAAATCAACAACGCTTGAAGTT...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGGCGTTTTACTCTTCTaGCCAGTTTCTTCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIGVLLF*PVSSFS
Trigger: TGAAAACGAAGAAACTGGTCAGAAGAGTAAAACGCC...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
CDS-3UTR GCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCTGCAGCATTAGAAGGTaGTTACTAAGGTGCTTCGTA +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFCSIRR*LLRCFV
Trigger: TACGAAGCACCTTAGTAAGCACCTTCTAATGCTGCA...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp ATCACTTGTGGTTTGACGGTCTTGATGCATCTCATCTCTTCTTCCAGCATTTTAATGAGATCTTTTCAGTaGAGGTTCACAAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: ITCGLTVLMHLISSSSILMRSFQ*RFTSWF
Trigger: AAACCAGCTTGTGAACCTCCACTGAAAAGATCTCAT...TAAAATGCTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp ATTCTCTCTGGAGGCAGAGAACATCTTTATAGGCTTCACATTATTTCTACAAATTTGACAAACAGAAGCTaGACTCAGGCAGAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: ILSGGREHLYRLHIISTNLTNRS*TQAELD
Trigger: ATCCAGCTCTGCCTGAGTCCAGCTTCTGTTTGTCAA...ATTTGTAGAAATAATGTGAAGCCTATAAAGATGTTCTCTGCCTCCAGAGAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTCTTTTGGTATCTGGATaGGTACTCGTATACGTAGCC +
Preference number: 4 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFLLVSG*VLVYVA
Trigger: GGCTACGTATACGAGTACCCATCCAGATACCAAAAG...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCCTTTTGGTATCTGGATaGGTACTCGTATACGTAGCC +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVLLVSG*VLVYVA
Trigger: GGCTACGTATACGAGTACCCATCCAGATACCAAAAG...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCCGTCCTTTTGGTATCTaGATGGGTACTCGTATACGT +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVRPFGI*MGTRIR
Trigger: ACGTATACGAGTACCCATCCAGATACCAAAAGGACG...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACTCACTGGTTTCTGCTaGTGGCTCAAGAAACTGAAC +
Preference number: 4 (lower is better)
Translates to: LLLLVICEYIYPWGRSISLTGFC*WLKKLN
Trigger: GTTCAGTTTCTTGAGCCACCAGCAGAAACCAGTGAG...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCCTCAATAGCTGTGTCTaGATCCAGGAAGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVLNSCV*IQEEPF
Trigger: AAAAGGCTCTTCCTGGATCCAGACACAGCTATTGAG...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp GCTCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTACAAACATGAATACATaGGCATACAAAAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: AQNHHKDVENNIITSWYVTNMNT*AYKSTW
Trigger: CCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT...AACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCGGAATGATGCAGCTCTaGATGTTGGAAAGGACAATT +
Preference number: 4 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFGMMQL*MLERTI
Trigger: AATTGTCCTTTCCAACATCCAGAGCTGCATCATTCC...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
CDS-3UTR TCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGCTGTGCGTATTTCATTaGTGTGTCTTTCCATATATC +
Preference number: 4 (lower is better)
Translates to: NYQSLDPHIYSEICSARGLCVFH*CVFPYI
Trigger: GATATATGGAAAGACACATCAATGAAATACGCACAG...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATCTGTGCGTATTTCATTaGTGTGTCTTTCCATATATC +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDLCVFH*CVFPYI
Trigger: GATATATGGAAAGACACATCAATGAAATACGCACAG...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGGTAGTAGCACCAAAGTaGATATTAAGAGTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: NYQSLDPHIYSEICSARGVVAPK*ILRVRK
Trigger: CTTTCTGACTCTTAATATTCACTTTGGTGCTACTAC...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCAATGGAATCAGATGTATaGTTGCCTATGAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LLLLVICEYIYPWGRSISMESDV*LPMRLA
Trigger: TGCCAGCCTCATAGGCAAGCATACATCTGATTCCAT...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGGTGCTTACTAAGGTaGTTCGTAATTCATGGTTTT +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDRCLLR*FVIHGF
Trigger: AAAACCATGAATTACGAAGCACCTTAGTAAGCACCT...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTCTTGCAAATAAACTATaGTTCCCAGATTTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSLANKL*FPDLGV
Trigger: CACTCCCAAATCTGGGAAGCATAGTTTATTTGCAAG...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCAGGCTTGTGGTGTCTGTaGTGTGTCAATACTAACAGA +
Preference number: 4 (lower is better)
Translates to: LLLLVICEYIYPWGRSISGLWCL*CVNTNR
Trigger: TCTGTTAGTATTGACACAGCACAGACACCACAAGCC...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TCTCCACTTAGCGTAGATCAATCAAGTCAGCCATCTCCTAAGAAATACACATTAAGAACATATGATGTTTaGCAGTGTCTGACATTACGG +
Preference number: 4 (lower is better)
Translates to: SPLSVDQSSQPSPKKYTLRTYDV*QCLTLR
Trigger: CCGTAATGTCAGACACTGGCAAACATCATATGTTCT...TAATGTGTATTTCTTAGGAGATGGCTGACTTGATTGATCTACGCTAAGTGGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR GCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAAGAACATATGATGTTTaGCAGTGTCTGACATTACGG +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIRTYDV*QCLTLR
Trigger: CCGTAATGTCAGACACTGGCAAACATCATATGTTCT...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGCATACAAAAGCACGTaGACAAGTTTTCTGTACAGT +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIAYKST*TSFLYS
Trigger: ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTGCATACAAAAGCACGTaGACAAGTTTTCTGTACAGT +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSAYKST*TSFLYS
Trigger: ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAACAAACATGAATACATaGGCATACAAAAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQITNMNT*AYKSTW
Trigger: CCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTGTGCGTATTTCATTaGTGTGTCTTTCCATATATC +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQILCVFH*CVFPYI
Trigger: GATATATGGAAAGACACATCAATGAAATACGCACAG...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR TCA 90 bp CAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGAACACTTGCAAGTAGTAGCACCAAAGTaGATATTAAGAGTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: QTRISHAMPHDLEGEHLQVVAPK*ILRVRK
Trigger: CTTTCTGACTCTTAATATTCACTTTGGTGCTACTAC...TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTTCTCTTGGTAATATGTaGATACATTTACCCATGGGG +
Preference number: 4 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFSLGNM*IHLPMG
Trigger: CCCCATGGGTAAATGTATTCACATATTACCAAGAGA...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCAATAGCTCTTTCTGTTaGCTCTCAAACTCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVNSSFC*LSNSSL
Trigger: TAAGGAGGAGTTTGAGAGGCAACAGAAAGAGCTATT...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR GCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAAGGTGCTTACTAAGGTaGTTCGTAATTCATGGTTTT +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIRCLLR*FVIHGF
Trigger: AAAACCATGAATTACGAAGCACCTTAGTAAGCACCT...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR GCA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTATATATTCTGAAATTTaGTCCGCAAGAGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSIYSEI*SARGLL
Trigger: CAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATAT...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGAATACATTTACCCATaGGGTAGAAGTATTTCACCT +
Preference number: 4 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIEYIYP*GRSISP
Trigger: AGGTGAAATACTTCTACCCCATGGGTAAATGTATTC...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATCTTTTAATCTTCTTTTaGCAGAGTAGGACTTTGAGA +
Preference number: 4 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDLLIFF*QSRTLR
Trigger: TCTCAAAGTCCTACTCTGCCAAAAGAAGATTAAAAG...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GCTCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTCTTTTAATCTTCTTTTaGCAGAGTAGGACTTTGAGA +
Preference number: 4 (lower is better)
Translates to: AQNHHKDVENNIITSWYVLLIFF*QSRTLR
Trigger: TCTCAAAGTCCTACTCTGCCAAAAGAAGATTAAAAG...AACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTCTTTTAATCTTCTTTTaGCAGAGTAGGACTTTGAGA +
Preference number: 4 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTLLIFF*QSRTLR
Trigger: TCTCAAAGTCCTACTCTGCCAAAAGAAGATTAAAAG...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR TCA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTGTAGTAGCACCAAAGTaGATATTAAGAGTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFVVAPK*ILRVRK
Trigger: CTTTCTGACTCTTAATATTCACTTTGGTGCTACTAC...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp ATTCTCTCTGGAGGCAGAGAACATCTTTATAGGCTTCACATTATTTCTACAAATAATGGTAAGAGACAGTaGTCCTTGATGATCATCTGT +
Preference number: 4 (lower is better)
Translates to: ILSGGREHLYRLHIISTNNGKRQ*SLMIIC
Trigger: ACAGATGATCATCAAGGACCACTGTCTCTTACCATT...ATTTGTAGAAATAATGTGAAGCCTATAAAGATGTTCTCTGCCTCCAGAGAGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CCA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGAATACATTTACCCATaGGGTAGAAGTATTTCACCT +
Preference number: 4 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGEYIYP*GRSISP
Trigger: AGGTGAAATACTTCTACCCCATGGGTAAATGTATTC...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CCA 90 bp ATTCTCTCTGGAGGCAGAGAACATCTTTATAGGCTTCACATTATTTCTACAAATTGTTCGTATCAGTATTaGCATTATTACGGTTATCAC +
Preference number: 4 (lower is better)
Translates to: ILSGGREHLYRLHIISTNCSYQY*HYYGYH
Trigger: GTGATAACCGTAATAATGCCAATACTGATACGAACA...ATTTGTAGAAATAATGTGAAGCCTATAAAGATGTTCTCTGCCTCCAGAGAGAAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS CCA 90 bp AACCGCTGGTGGATCATCTTGCCTCCCCGACGCTCTGGCCCTCTCTaGGCAGGCGGGCGGGAGGTGACAGCTAGTCCTGCTGCATGCTCA +
Preference number: 5 (lower is better)
Translates to: NRWWIILPPRRSGPL*AGGREVTASPAACS
Trigger: TGAGCATGCAGCAGGACTAGCTGTCACCTCCCGCCCGCCTGCCCAGAGAGGGCCAGAGCGTCGGGGAGGCAAGATGATCCACCAGCGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000397378.7
ENST00000448183.6
ENST00000459670.2
ENST00000461055.2
ENST00000468612.5
ENST00000504387.5
ENST00000504634.5
ENST00000508546.5
ENST00000508800.1
ENST00000512665.5
ENST00000513989.5
ENST00000514660.1
CDS TCA 90 bp ATTAAGCACTGCGGTGCCCGCCCCTCCATTGAGTGCAGCGCTAGATaGAAGCGAGAAGGTCCCGGGCAGAGCCGCTTGTCAGTCGCAGCG +
Preference number: 5 (lower is better)
Translates to: IKHCGARPSIECSAR*KREGPGQSRLSVAA
Trigger: CGCTGCGACTGACAAGCGGCTCTGCCCGGGACCTTCTCGCTTTCATCTAGCGCTGCACTCAATGGAGGGGCGGGCACCGCAGTGCTTAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379433.5
ENST00000379446.10
ENST00000620854.4
CDS GCA 90 bp CCTCTCTGGGCAGGCGGGCGGGAGGTGACAGCTAGTCCTGCTGCATaGTCATGTTTCCCTCTCCATGCAGCGAGCGGACTTGCTTCTAGA +
Preference number: 5 (lower is better)
Translates to: PLWAGGREVTASPAA*SCFPLHAASGLASR
Trigger: TCTAGAAGCAAGTCCGCTCGCTGCATGGAGAGGGAAACATGAGCATGCAGCAGGACTAGCTGTCACCTCCCGCCCGCCTGCCCAGAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000397378.7
ENST00000448183.6
ENST00000459670.2
ENST00000461055.2
ENST00000468612.5
ENST00000504387.5
ENST00000504634.5
ENST00000508546.5
ENST00000508800.1
ENST00000513989.5
ENST00000514660.1
CDS CCA 90 bp GGACCTCACAGCTTACTGAATCCAAGTGTAGGATGGAACCGCTGGTaGATCATCTTGCCTCCCCGACGCTCTGGCCCTCTCTGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: GPHSLLNPSVGWNRW*IILPPRRSGPLWAG
Trigger: GCCTGCCCAGAGAGGGCCAGAGCGTCGGGGAGGCAAGATGATCCACCAGCGGTTCCATCCTACACTTGGATTCAGTAAGCTGTGAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000448183.6
ENST00000459670.2
ENST00000468612.5
ENST00000504387.5
ENST00000504634.5
ENST00000508546.5
ENST00000512665.5
ENST00000513989.5
ENST00000514660.1
CDS CCA 90 bp GTAGCACAAGAGATCCAATGCCCAAGTGTAGGATGGAACCGCTGGTaGATCATCTTGCCTCCCCGACGCTCTGGCCCTCTCTGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: VAQEIQCPSVGWNRW*IILPPRRSGPLWAG
Trigger: GCCTGCCCAGAGAGGGCCAGAGCGTCGGGGAGGCAAGATGATCCACCAGCGGTTCCATCCTACACTTGGGCATTGGATCTCTTGTGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508800.1
CDS-3UTR CAA 90 bp GTTGCGGGGGTGGGTGATTCGGGGACAGGCTCTGGTGCCTTCGAGCCACCGGTTAAAACACAGGGCCTTTaGCTGATGAGGGAGGGATGT +
Preference number: 5 (lower is better)
Translates to: VAGVGDSGTGSGAFEPPVKTQGL*LMREGC
Trigger: ACATCCCTCCCTCATCAGCAAAAGGCCCTGTGTTTT...AACCGGTGGCTCGAAGGCACCAGAGCCTGTCCCCGAATCACCCACCCCCGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp GCAGGTTGGAGGAATGTCATAAACCCCCTCCGGTCTGAGGTCCGGCCTTCCAGCGACAGTGAGGACTCCTaGGAGGAGGTGGAAGACGTG +
Preference number: 5 (lower is better)
Translates to: AGWRNVINPLRSEVRPSSDSEDS*EEVEDV
Trigger: CACGTCTTCCACCTCCTCCAAGGAGTCCTCACTGTC...GCTGGAAGGCCGGACCTCAGACCGGAGGGGGTTTATGACATTCCTCCAACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp CGCGGGGGCTGGGCTGAGCTGACACAACTGAAGAGTGCGTCAATGGCGTTGAGACACTCACGCCACTGTTaGTGGTGGGTAGGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: RGGWAELTQLKSASMALRHSRHC*WWVGSE
Trigger: CTCAGAGCCTACCCACCACAAACAGTGGCGTGAGTG...TCTCAACGCCATTGACGCACTCTTCAGTTGTGTCAGCTCAGCCCAGCCCCCGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGCCCGGGCAGAGCCGCTaGTCAGTCGCAGCGCCTCCC +
Preference number: 5 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKPGQSR*SVAAPP
Trigger: GGGAGGCGCTGCGACTGACAAGCGGCTCTGCCCGGG...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000620854.4
CDS-3UTR CAA 90 bp GCAGGTTGGAGGAATGTCATAAACCCCCTCCGGTCTGAGGTCCGGCCTTCCAGCCACCTGATATACCTCTaGTTCTTGGGTGCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: AGWRNVINPLRSEVRPSSHLIYL*FLGAVA
Trigger: GGCCACGGCACCCAAGAACAAGAGGTATATCAGGTG...GCTGGAAGGCCGGACCTCAGACCGGAGGGGGTTTATGACATTCCTCCAACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp TCTGCTGCATCAGTCCAGAGGCAGGCTGCTCGTGACTGGAGGCAGTCTCCTGCATCCGCAAGAGGGCTTTaGGGCACTTGGCCATCATGT +
Preference number: 5 (lower is better)
Translates to: SAASVQRQAARDWRQSPASARGL*GTWPSC
Trigger: ACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGA...TGCAGGAGACTGCCTCCAGTCACGAGCAGCCTGCCTCTGGACTGATGCAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp GCAGGTTGGAGGAATGTCATAAACCCCCTCCGGTCTGAGGTCCGGCCTTCCAGCTGGGCTGTTCTTGGCTaGATACGGTGCCCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: AGWRNVINPLRSEVRPSSWAVLG*IRCPEL
Trigger: AAGCTCTGGGCACCGTATCAAGCCAAGAACAGCCCA...GCTGGAAGGCCGGACCTCAGACCGGAGGGGGTTTATGACATTCCTCCAACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp GTTGCGGGGGTGGGTGATTCGGGGACAGGCTCTGGTGCCTTCGAGCCACCGGTTGAAATGGGTCTCACATaGGTCATAGTAGAAGCACAG +
Preference number: 5 (lower is better)
Translates to: VAGVGDSGTGSGAFEPPVEMGLT*VIVEAQ
Trigger: CTGTGCTTCTACTATGACCAATGTGAGACCCATTTC...AACCGGTGGCTCGAAGGCACCAGAGCCTGTCCCCGAATCACCCACCCCCGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS GCA 90 bp GGTTGTGAGAAAGCTGAGGCCCACTCATTACCTGTAGGAGTGATTTaGCAAGGCGGCAGGGCAGGTCAGACCCGATTCCAGCTTTCCACG +
Preference number: 5 (lower is better)
Translates to: GCEKAEAHSLPVGVI*QGGRAGQTRFQLST
Trigger: CGTGGAAAGCTGGAATCGGGTCTGACCTGCCCTGCCGCCTTGGCAAATCACTCCTACAGGTAATGAGTGGGCCTCAGCTTTCTCACAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512665.5
CDS CCA 90 bp TTTCCCCATTATTCATTCTCTCCAAGTGTAGGATGGAACCGCTGGTaGATCATCTTGCCTCCCCGACGCTCTGGCCCTCTCTGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: FPHYSFSPSVGWNRW*IILPPRRSGPLWAG
Trigger: GCCTGCCCAGAGAGGGCCAGAGCGTCGGGGAGGCAAGATGATCCACCAGCGGTTCCATCCTACACTTGGAGAGAATGAATAATGGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397378.7
ENST00000461055.2
CDS-3UTR CAA 90 bp GGAAGGTGGCACTTGGTAGATGGTGTCTCGGGGAGCAGCCTGTGGGTTTGGCACGTGGCCAGTGGGGACTaGGTAAATTCCCTGATTTTG +
Preference number: 5 (lower is better)
Translates to: GRWHLVDGVSGSSLWVWHVASGD*VNSLIL
Trigger: CAAAATCAGGGAATTTACCAAGTCCCCACTGGCCAC...GTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAGTGCCACCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp ACCCCAAGTTGGGTGAAGCCACTATTGGCAGGCAAGGAGGGCTGCTGGATGGTTATATACCTCTTGTTCTaGGGTGCCGTGGCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: TPSWVKPLLAGKEGCWMVIYLLF*GAVASG
Trigger: CCCACTGGCCACGGCACCCAAGAACAAGAGGTATAT...AACCATCCAGCAGCCCTCCTTGCCTGCCAATAGTGGCTTCACCCAACTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp TGTCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCTTCGGCAGCGGTGGGTaGAGCCGTTTTCCTACACTA +
Preference number: 5 (lower is better)
Translates to: CPFPQMPCTPIPLCLHPCFGSGG*SRFPTL
Trigger: TAGTGTAGGAAAACGGCTCAACCCACCGCTGCCGAA...GCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp TCCTTCCAGTCCCCCTGTGTTCTGCTCTATGACGGTCAGGATGTCTCCCTTGCGGCACACTCTGGGACATaGTCATATAAGGCCCTTGCC +
Preference number: 5 (lower is better)
Translates to: SFQSPCVLLYDGQDVSLAAHSGT*SYKALA
Trigger: GGCAAGGGCCTTATATGACAATGTCCCAGAGTGTGC...CGCAAGGGAGACATCCTGACCGTCATAGAGCAGAACACAGGGGGACTGGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp CTGGGGGTTTGCTTTCTCACTGGTTTCTGCTGGTGGCTCAAGAAACTGAACGCCTCCTTCCCTGCTGGCTaGGTGCAGGTTGGAGGAATG +
Preference number: 5 (lower is better)
Translates to: LGVCFLTGFCWWLKKLNASFPAG*VQVGGM
Trigger: CATTCCTCCAACCTGCACCAAGCCAGCAGGGAAGGA...GGCGTTCAGTTTCTTGAGCCACCAGCAGAAACCAGTGAGAAAGCAAACCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp CTAAGCCCTGCTTCATCCCGGCAAGCAGAGGGCGGAATGGCATATACCCCTTTTTCCCGCTTCATCTTGTaGTGGAGGATGAGTTCCGGG +
Preference number: 5 (lower is better)
Translates to: LSPASSRQAEGGMAYTPFSRFIL*WRMSSG
Trigger: CCCGGAACTCATCCTCCACAACAAGATGAAGCGGGA...AAAAGGGGTATATGCCATTCCGCCCTCTGCTTGCCGGGATGAAGCAGGGCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp CGCGGGGGCTGGGCTGAGCTGACACAACTGAAGAGTGCGTCAATGGCGTTGAGACACTTGTTCTGGGGCTaGTTGATGGCCAAGATATTC +
Preference number: 5 (lower is better)
Translates to: RGGWAELTQLKSASMALRHLFWG*LMAKIF
Trigger: GAATATCTTGGCCATCAACAAGCCCCAGAACAAGTG...TCTCAACGCCATTGACGCACTCTTCAGTTGTGTCAGCTCAGCCCAGCCCCCGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAGTTGTGGTGAGCTGCTaGGCGTCATCGGGCACCGTC +
Preference number: 5 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSVVVSC*ASSGTV
Trigger: GACGGTGCCCGATGACGCCAAGCAGCTCACCACAAC...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CTGGGGGTTTGCTTTCTCACTGGTTTCTGCTGGTGGCTCAAGAAACTGAACGCCGCCTCTGCGTTGGTGTaGATGGTTGTGGTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LGVCFLTGFCWWLKKLNAASALV*MVVVSC
Trigger: GCAGCTCACCACAACCATCAACACCAACGCAGAGGC...GGCGTTCAGTTTCTTGAGCCACCAGCAGAAACCAGTGAGAAAGCAAACCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp TTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAATATTGTGGGCCTGGGCCTaGTGGTCACCAGGATGCAGC +
Preference number: 5 (lower is better)
Translates to: FTCPMKNLMACGVCAVSILWAWA*WSPGCS
Trigger: GCTGCATCCTGGTGACCACAAGGCCCAGGCCCACAA...TATTGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp TGCAGCTCCCGCTTCATCTTGTTGTGGAGGATGAGTTCCGGGAGGCAGGCAGCACTCCTTGTCCACATTTaGCCCCAAGGAATGATGCAG +
Preference number: 5 (lower is better)
Translates to: CSSRFILLWRMSSGRQAALLVHI*PQGMMQ
Trigger: CTGCATCATTCCTTGGGGCAAAATGTGGACAAGGAG...TGCTGCCTGCCTCCCGGAACTCATCCTCCACAACAAGATGAAGCGGGAGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp CGCGGGGGCTGGGCTGAGCTGACACAACTGAAGAGTGCGTCAATGGCGTTGAGAAGATTCTTGGAACGTTaGCCCAGAAAGGAGATTGGG +
Preference number: 5 (lower is better)
Translates to: RGGWAELTQLKSASMALRRFLER*PRKEIG
Trigger: CCCAATCTCCTTTCTGGGCAAACGTTCCAAGAATCT...TCTCAACGCCATTGACGCACTCTTCAGTTGTGTCAGCTCAGCCCAGCCCCCGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp AGGGGACAAGACAACAGGAACAAGACAAGCAACAGTCAATTCTTGCTTTCTAATCCCGGGCAGAGCCGCTaGTCAGTCGCAGCGCCTCCC +
Preference number: 5 (lower is better)
Translates to: RGQDNRNKTSNSQFLLSNPGQSR*SVAAPP
Trigger: GGGAGGCGCTGCGACTGACAAGCGGCTCTGCCCGGG...ATTAGAAAGCAAGAATTGACTGTTGCTTGTCTTGTTCCTGTTGTCTTGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp GCTCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTCCCGGGCAGAGCCGCTaGTCAGTCGCAGCGCCTCCC +
Preference number: 5 (lower is better)
Translates to: AQNHHKDVENNIITSWYVPGQSR*SVAAPP
Trigger: GGGAGGCGCTGCGACTGACAAGCGGCTCTGCCCGGG...AACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000620854.4
CDS-3UTR CAA 90 bp TGTCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCGCACACTCTGGGACATaGTCATATAAGGCCCTTGCC +
Preference number: 5 (lower is better)
Translates to: CPFPQMPCTPIPLCLHPCAHSGT*SYKALA
Trigger: GGCAAGGGCCTTATATGACAATGTCCCAGAGTGTGC...GCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp AACAGTGCCCTATCAGCCATGCATGGTAGTGTTGGGCAAGAGAGGGATCCAAGAGTAGGAAGGTGGCACTaGGTAGATGGTGTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: NSALSAMHGSVGQERDPRVGRWH*VDGVSG
Trigger: CCCCGAGACACCATCTACCAAGTGCCACCTTCCTAC...TCTTGGATCCCTCTCTTGCCCAACACTACCATGCATGGCTGATAGGGCACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp GGAAGGTGGCACTTGGTAGATGGTGTCTCGGGGAGCAGCCTGTGGGTTTGGCACGTAAATTCCCTGATTTaGGTAGGAAGGTGGCACTTG +
Preference number: 5 (lower is better)
Translates to: GRWHLVDGVSGSSLWVWHVNSLI*VGRWHL
Trigger: CAAGTGCCACCTTCCTACCAAAATCAGGGAATTTAC...GTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAGTGCCACCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp TGTCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCAGAATGCACCCCAAGTaGGGTGAAGCCACTATTGGC +
Preference number: 5 (lower is better)
Translates to: CPFPQMPCTPIPLCLHPCRMHPK*GEATIG
Trigger: GCCAATAGTGGCTTCACCCAACTTGGGGTGCATTCT...GCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATGACAGTGAGGACTCCTaGGAGGAGGTGGAAGACGTG +
Preference number: 5 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNDSEDS*EEVEDV
Trigger: CACGTCTTCCACCTCCTCCAAGGAGTCCTCACTGTC...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATGCCATGACTATGGTCTaGAGCTGCTCGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNAMTMV*SCSQSW
Trigger: CCAGCTCTGCGAGCAGCTCAAGACCATAGTCATGGC...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GTGGGTTTGGCACTTGATAGAGCTTCTGTTGGCCAAAGGTCTGCTGCATCAGTCGCCATGACTATGGTCTaGAGCTGCTCGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: VGLALDRASVGQRSAASVAMTMV*SCSQSW
Trigger: CCAGCTCTGCGAGCAGCTCAAGACCATAGTCATGGC...GACTGATGCAGCAGACCTTTGGCCAACAGAAGCTCTATCAAGTGCCAAACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS TCA 90 bp AAGCAGATTGCCCTTCATAATGTTGGTGGGCCTCATCCAATCAGTTaGAGGCCTGTAGGAGTGATTTGCCAAGGCGGCAGGGCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: KQIALHNVGGPHPIS*RPVGVICQGGRAGQ
Trigger: CTGACCTGCCCTGCCGCCTTGGCAAATCACTCCTACAGGCCTTCAACTGATTGGATGAGGCCCACCAACATTATGAAGGGCAATCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468612.5
ENST00000508546.5
CDS-3UTR CAA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGGTGCCCGCCCCTCCATaGAGTGCAGCGCTAGATGAA +
Preference number: 5 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKVPAPP*SAALDE
Trigger: TTCATCTAGCGCTGCACTCAATGGAGGGGCGGGCAC...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000620854.4
CDS-3UTR CAA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAGTCAGGATGTCTCCCTaGCGAAAGGCCAGTTCCTCG +
Preference number: 5 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSVRMSP*RKASSS
Trigger: CGAGGAACTGGCCTTTCGCAAGGGAGACATCCTGAC...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CAA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAAGAAGCTTCACCCGGTaGCCTGGGACAATGCCTTGC +
Preference number: 5 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVRSFTR*PGTMPC
Trigger: GCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTCT...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CAA 90 bp ACCCCAAGTTGGGTGAAGCCACTATTGGCAGGCAAGGAGGGCTGCTGGATGGTTGAATCAGATGTATGCTaGCCTATGAGGCTGGCAGAA +
Preference number: 5 (lower is better)
Translates to: TPSWVKPLLAGKEGCWMVESDVC*PMRLAE
Trigger: TTCTGCCAGCCTCATAGGCAAGCATACATCTGATTC...AACCATCCAGCAGCCCTCCTTGCCTGCCAATAGTGGCTTCACCCAACTTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp TGTCCATTTCCACAGATGCCCTGCACGCCCATACCTCTGTGCCTTCATCCATGCCTGAAGACATCAGGGTaGCCAGAACAGCTCAAAGCA +
Preference number: 5 (lower is better)
Translates to: CPFPQMPCTPIPLCLHPCLKTSG*PEQLKA
Trigger: TGCTTTGAGCTGTTCTGGCAACCCTGATGTCTTCAG...GCATGGATGAAGGCACAGAGGTATGGGCGTGCAGGGCATCTGTGGAAATGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp TGCCTGGGAGGCTGTGCTGGGTTTTCTACAGCTTCTTTGGGTAAGGGGGAACATCCATGCATGGTAGTGTaGGGCAAGAGAGGGATCCAA +
Preference number: 5 (lower is better)
Translates to: CLGGCAGFSTASLGKGEHPCMVV*GKRGIQ
Trigger: TTGGATCCCTCTCTTGCCCAACACTACCATGCATGG...ATGTTCCCCCTTACCCAAAGAAGCTGTAGAAAACCCAGCACAGCCTCCCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp TTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAATACACTCACGCCACTGTTaGTGGTGGGTAGGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: FTCPMKNLMACGVCAVSIHSRHC*WWVGSE
Trigger: CTCAGAGCCTACCCACCACAAACAGTGGCGTGAGTG...TATTGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp TCAGATGTATGCTTGCCTATGAGGCTGGCAGAAGGAAACAAAATTCTCTCTGGACGCTGGTGGATCATCTaGCCTCCCCGACGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: SDVCLPMRLAEGNKILSGRWWII*PPRRSG
Trigger: GCCAGAGCGTCGGGGAGGCAAGATGATCCACCAGCG...TCCAGAGAGAATTTTGTTTCCTTCTGCCAGCCTCATAGGCAAGCATACATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCATTCGGCAGCGGTGGGTaGAGCCGTTTTCCTACACTA +
Preference number: 5 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSFGSGG*SRFPTL
Trigger: TAGTGTAGGAAAACGGCTCAACCCACCGCTGCCGAA...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000620854.4
CDS-3UTR CAA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGGTAGGAAGGTGGCACTaGGTAGATGGTGTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKVGRWH*VDGVSG
Trigger: CCCCGAGACACCATCTACCAAGTGCCACCTTCCTAC...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CAA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAATATACCTCTTGTTCTaGGGTGCCGTGGCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSIYLLF*GAVASG
Trigger: CCCACTGGCCACGGCACCCAAGAACAAGAGGTATAT...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CAA 90 bp ACCCCAAGTTGGGTGAAGCCACTATTGGCAGGCAAGGAGGGCTGCTGGATGGTTTTTTCTACAGCTTCTTaGGGTAAGGGGGAACATTGG +
Preference number: 5 (lower is better)
Translates to: TPSWVKPLLAGKEGCWMVFSTAS*GKGEHW
Trigger: CCAATGTTCCCCCTTACCCAAAGAAGCTGTAGAAAA...AACCATCCAGCAGCCCTCCTTGCCTGCCAATAGTGGCTTCACCCAACTTGGGGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGTCCTTCCCTGCTGGCTaGGTGCAGGTTGGAGGAATG +
Preference number: 5 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLSFPAG*VQVGGM
Trigger: CATTCCTCCAACCTGCACCAAGCCAGCAGGGAAGGA...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATAGGAACAGCTCCACCTaGTCCACTGCTGTGCGTATT +
Preference number: 5 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNRNSST*STAVRI
Trigger: AATACGCACAGCAGTGGACAAGGTGGAGCTGTTCCT...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp ATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGAGGAACAGCTCCACCTaGTCCACTGCTGTGCGTATT +
Preference number: 5 (lower is better)
Translates to: MIKDLASFPQVMGVVAPKRNSST*STAVRI
Trigger: AATACGCACAGCAGTGGACAAGGTGGAGCTGTTCCT...CTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp ATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGGGAGTCTTCAACTCGTaGCAGCTCCCGCTTCATCTT +
Preference number: 5 (lower is better)
Translates to: MIKDLASFPQVMGVVAPKGVFNS*QLPLHL
Trigger: AAGATGAAGCGGGAGCTGCAACGAGTTGAAGACTCC...CTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGCATCGGGCACCGTCTTaGCCACCATCACAAACCGGT +
Preference number: 5 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLHRAPS*PPSQTG
Trigger: ACCGGTTTGTGATGGTGGCAAAGACGGTGCCCGATG...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp TCAGATGTATGCTTGCCTATGAGGCTGGCAGAAGGAAACAAAATTCTCTCTGGATTGTGGGCCTGGGCCTaGTGGTCACCAGGATGCAGC +
Preference number: 5 (lower is better)
Translates to: SDVCLPMRLAEGNKILSGLWAWA*WSPGCS
Trigger: GCTGCATCCTGGTGACCACAAGGCCCAGGCCCACAA...TCCAGAGAGAATTTTGTTTCCTTCTGCCAGCCTCATAGGCAAGCATACATCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp CTGGGGGTTTGCTTTCTCACTGGTTTCTGCTGGTGGCTCAAGAAACTGAACGCCCTGGAGTTCATGACTTaGTTGCGAATGTCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: LGVCFLTGFCWWLKKLNALEFMT*LRMSWA
Trigger: TGCCCAGGACATTCGCAACAAAGTCATGAACTCCAG...GGCGTTCAGTTTCTTGAGCCACCAGCAGAAACCAGTGAGAAAGCAAACCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTTGGAGGGCGGCCATCTaGGTTGCCATGACTATGGTC +
Preference number: 5 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVWRAAI*VAMTMV
Trigger: GACCATAGTCATGGCAACCAAGATGGCCGCCCTCCA...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CTAAGCCCTGCTTCATCCCGGCAAGCAGAGGGCGGAATGGCATATACCCCTTTTTTTCTTCTCAGAACGTaGCCATCTCCAGCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: LSPASSRQAEGGMAYTPFFLLRT*PSPAKS
Trigger: GCTCTTTGCTGGAGATGGCAACGTTCTGAGAAGAAA...AAAAGGGGTATATGCCATTCCGCCCTCTGCTTGCCGGGATGAAGCAGGGCTTAG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATCTATGCTTCCCAGATTaGGGAGTGCCAGGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNLCFPD*GVPGSE
Trigger: TTCTGAGCCTGGCACTCCCAAATCTGGGAAGCATAG...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCATCCGCAAGAGGGCTTTaGGGCACTTGGCCATCATGT +
Preference number: 5 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSSARGL*GTWPSC
Trigger: ACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGA...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGTAGCACCAAAGTGAATCAGAAAGGCCTCTACTaGCAACTGGCGGATCAAACC +
Preference number: 5 (lower is better)
Translates to: QGPGQFPSGNGGSSTKVNQKGLY*QLADQT
Trigger: GGTTTGATCCGCCAGTTGCAAGTAGAGGCCTTTCTG...ATTCACTTTGGTGCTACTACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS TCA 90 bp ACTGCAGAGGAAATTGACAACCTCCCCTGTGCAGAAGTTATGTCCTaGGGCATCTTCCTCGGTCACGGTCATGGTTTTCTCTCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: TAEEIDNLPCAEVMS*GIFLGHGHGFLSPL
Trigger: GAGAGGAGAGAGAAAACCATGACCGTGACCGAGGAAGATGCCTCAGGACATAACTTCTGCACAGGGGAGGTTGTCAATTTCCTCTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512665.5
CDS-3UTR CAA 90 bp TCAGATGTATGCTTGCCTATGAGGCTGGCAGAAGGAAACAAAATTCTCTCTGGAGTGCCCGCCCCTCCATaGAGTGCAGCGCTAGATGAA +
Preference number: 5 (lower is better)
Translates to: SDVCLPMRLAEGNKILSGVPAPP*SAALDE
Trigger: TTCATCTAGCGCTGCACTCAATGGAGGGGCGGGCAC...TCCAGAGAGAATTTTGTTTCCTTCTGCCAGCCTCATAGGCAAGCATACATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp CACAAATGCAGAAGATTGAACAGCCCCAGGGAGGCAATTGCTCTCCTTTTATTGGTCAGGATGTCTCCCTaGCGAAAGGCCAGTTCCTCG +
Preference number: 5 (lower is better)
Translates to: HKCRRLNSPREAIALLLLVRMSP*RKASSS
Trigger: CGAGGAACTGGCCTTTCGCAAGGGAGACATCCTGAC...CAATAAAAGGAGAGCAATTGCCTCCCTGGGGCTGTTCAATCTTCTGCATTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CAA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTCACCTGATATACCTCTaGTTCTTGGGTGCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVHLIYL*FLGAVA
Trigger: GGCCACGGCACCCAAGAACAAGAGGTATATCAGGTG...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CAA 90 bp TCAGATGTATGCTTGCCTATGAGGCTGGCAGAAGGAAACAAAATTCTCTCTGGATGGGTGAAGCCACTATaGGCAGGCAAGGAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: SDVCLPMRLAEGNKILSGWVKPL*AGKEGC
Trigger: GCAGCCCTCCTTGCCTGCCAATAGTGGCTTCACCCA...TCCAGAGAGAATTTTGTTTCCTTCTGCCAGCCTCATAGGCAAGCATACATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTAGGAACAGCTCCACCTaGTCCACTGCTGTGCGTATT +
Preference number: 5 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCRNSST*STAVRI
Trigger: AATACGCACAGCAGTGGACAAGGTGGAGCTGTTCCT...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTAGCTCCCGCTTCATCTaGTTGTGGAGGATGAGTTCC +
Preference number: 5 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCSSRFI*LWRMSS
Trigger: GGAACTCATCCTCCACAACAAGATGAAGCGGGAGCT...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAACAAGTTGTGGTGAGCTGCTaGGCGTCATCGGGCACCGTC +
Preference number: 5 (lower is better)
Translates to: PGRQLLSFYCSCLSVLKQVVVSC*ASSGTV
Trigger: GACGGTGCCCGATGACGCCAAGCAGCTCACCACAAC...TTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CTGTGCTGTGTCAATACTAACAGATGTGAGGAGACAGACTATGGAATGGACGCTCACTCACGCCACTGTTaGTGGTGGGTAGGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: LCCVNTNRCEETDYGMDAHSRHC*WWVGSE
Trigger: CTCAGAGCCTACCCACCACAAACAGTGGCGTGAGTG...AGCGTCCATTCCATAGTCTGTCTCCTCACATCTGTTAGTATTGACACAGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GCTGCCTGTACTGGAGAAAGACAATCGGTTGATCCCATCCACCAAGTCCCGAGAAGTGCGTCAATGGCGTaGAGAAGGGAAATGAAATGG +
Preference number: 5 (lower is better)
Translates to: AACTGERQSVDPIHQVPRSASMA*RREMKW
Trigger: CCATTTCATTTCCCTTCTCAACGCCATTGACGCACT...TCTCGGGACTTGGTGGATGGGATCAACCGATTGTCTTTCTCCAGTACAGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCACTATGCTTCCCAGATTaGGGAGTGCCAGGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSLCFPD*GVPGSE
Trigger: TTCTGAGCCTGGCACTCCCAAATCTGGGAAGCATAG...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTTCCGCAAGAGGGCTTTaGGGCACTTGGCCATCATGT +
Preference number: 5 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVSARGL*GTWPSC
Trigger: ACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGA...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp TTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCAATACAGAAAGGCCTCTACTaGCAACTGGCGGATCAAACC +
Preference number: 5 (lower is better)
Translates to: FTCPMKNLMACGVCAVSIQKGLY*QLADQT
Trigger: GGTTTGATCCGCCAGTTGCAAGTAGAGGCCTTTCTG...TATTGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGAAGAACCTGATGGCTaGTGGTGTCTGTGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVEEPDG*WCLCCV
Trigger: GACACAGCACAGACACCACAAGCCATCAGGTTCTTC...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTGAAGAACCTGATGGCTaGTGGTGTCTGTGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCEEPDG*WCLCCV
Trigger: GACACAGCACAGACACCACAAGCCATCAGGTTCTTC...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTCGCTGGTGGATCATCTaGCCTCCCCGACGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTRWWII*PPRRSG
Trigger: GCCAGAGCGTCGGGGAGGCAAGATGATCCACCAGCG...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CAA 90 bp CACAAATGCAGAAGATTGAACAGCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTTCGGCAGCGGTGGGTaGAGCCGTTTTCCTACACTA +
Preference number: 5 (lower is better)
Translates to: HKCRRLNSPREAIALLLLFGSGG*SRFPTL
Trigger: TAGTGTAGGAAAACGGCTCAACCCACCGCTGCCGAA...CAATAAAAGGAGAGCAATTGCCTCCCTGGGGCTGTTCAATCTTCTGCATTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000620854.4
CDS-3UTR CAA 90 bp CTCTATAGTTCCATGATCAAGGACCTGGCCAGTTTCCCTCAGGTAATGGGGGTAGATGTCGTATACCCCTaGAGTGGTATGAGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: LYSSMIKDLASFPQVMGVDVVYP*SGMRRR
Trigger: CCTCCTTCTCATACCACTCAAGGGGTATACGACATC...TACCCCCATTACCTGAGGGAAACTGGCCAGGTCCTTGATCATGGAACTATAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGATGCAGCTCTGGATGTaGGAAAGGACAATTCCGGCG +
Preference number: 5 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLMQLWM*ERTIPA
Trigger: CGCCGGAATTGTCCTTTCCAACATCCAGAGCTGCAT...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp GAGAAAGACGGCAAGCCTCCAAACTCAGGACACTTTATTAAAATGCTCATCAGAAGAAGCTTCACCCGGTaGCCTGGGACAATGCCTTGC +
Preference number: 5 (lower is better)
Translates to: EKDGKPPNSGHFIKMLIRRSFTR*PGTMPC
Trigger: GCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTCT...TCTGATGAGCATTTTAATAAAGTGTCCTGAGTTTGGAGGCTTGCCGTCTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGCTGAAGACATCAGGGTaGCCAGAACAGCTCAAAGCA +
Preference number: 5 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKLKTSG*PEQLKA
Trigger: TGCTTTGAGCTGTTCTGGCAACCCTGATGTCTTCAG...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGAAAACACAGGGCCTTTaGCTGATGAGGGAGGGATGT +
Preference number: 5 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKKTQGL*LMREGC
Trigger: ACATCCCTCCCTCATCAGCAAAAGGCCCTGTGTTTT...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTGATGTCATACACCCCTaGAGGTTTTATCTCTCCCAC +
Preference number: 5 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCDVIHP*RFYLSH
Trigger: GTGGGAGAGATAAAACCTCAAGGGGTGTATGACATC...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATGTGTTTAAGGAGAAAGACAATCGGTaGATCCCATCCACCAAGTCC +
Preference number: 5 (lower is better)
Translates to: LKFAPQEGFWALGHHVFKEKDNR*IPSTKS
Trigger: GGACTTGGTGGATGGGATCAACCGATTGTCTTTCTC...CTTAAACACATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTTTTGCAACAGCTCCCTaGACAAAGTGGAGGTACTCC +
Preference number: 5 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVFATAP*TKWRYS
Trigger: GGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAAA...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GGTTATACACACTGGCCACAGGAAGTTGCAAAAATTAGATGGACTCTGTGTAGCTCCCGCTTCATCTTGTaGTGGAGGATGAGTTCCGGG +
Preference number: 5 (lower is better)
Translates to: GYTHWPQEVAKIRWTLCSSRFIL*WRMSSG
Trigger: CCCGGAACTCATCCTCCACAACAAGATGAAGCGGGA...GCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CTGTGCTGTGTCAATACTAACAGATGTGAGGAGACAGACTATGGAATGGACGCTAGCTCCCGCTTCATCTaGTTGTGGAGGATGAGTTCC +
Preference number: 5 (lower is better)
Translates to: LCCVNTNRCEETDYGMDASSRFI*LWRMSS
Trigger: GGAACTCATCCTCCACAACAAGATGAAGCGGGAGCT...AGCGTCCATTCCATAGTCTGTCTCCTCACATCTGTTAGTATTGACACAGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCACTTGTTCTGGGGCTaGTTGATGGCCAAGATATTC +
Preference number: 5 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCHLFWG*LMAKIF
Trigger: GAATATCTTGGCCATCAACAAGCCCCAGAACAAGTG...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCACACTTGTTCTGGGGCTaGTTGATGGCCAAGATATTC +
Preference number: 5 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSHLFWG*LMAKIF
Trigger: GAATATCTTGGCCATCAACAAGCCCCAGAACAAGTG...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTGTTGTGGTGAGCTGCTaGGCGTCATCGGGCACCGTC +
Preference number: 5 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSVVVSC*ASSGTV
Trigger: GACGGTGCCCGATGACGCCAAGCAGCTCACCACAAC...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp TCTCCACTTAGCGTAGATCAATCAAGTCAGCCATCTCCTAAGAAATACACATTATTGTGGGCCTGGGCCTaGTGGTCACCAGGATGCAGC +
Preference number: 5 (lower is better)
Translates to: SPLSVDQSSQPSPKKYTLLWAWA*WSPGCS
Trigger: GCTGCATCCTGGTGACCACAAGGCCCAGGCCCACAA...TAATGTGTATTTCTTAGGAGATGGCTGACTTGATTGATCTACGCTAAGTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCTTGTGGGCCTGGGCCTaGTGGTCACCAGGATGCAGC +
Preference number: 5 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFLWAWA*WSPGCS
Trigger: GCTGCATCCTGGTGACCACAAGGCCCAGGCCCACAA...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp GAGGGATATCATAGACGTCCTTTTGGTATCTGGATGGGTACTCGTATACGTAGCTGCTCGCAGAGCTGGTaGCTGGAGTTCATGACTTTG +
Preference number: 5 (lower is better)
Translates to: EGYHRRPFGIWMGTRIRSCSQSW*LEFMTL
Trigger: CAAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCA...GCTACGTATACGAGTACCCATCCAGATACCAAAAGGACGTCTATGATATCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGTCCAGCAAAGAGCGCTaGAACAGCTGGGCATTTCTA +
Preference number: 5 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLSSKER*NSWAFL
Trigger: TAGAAATGCCCAGCTGTTCAAGCGCTCTTTGCTGGA...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp TATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTCTGTGCTGTGTCATTTCTTCTCAGAACGTaGCCATCTCCAGCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: YFTCPMKNLMACGVCAVSFLLRT*PSPAKS
Trigger: GCTCTTTGCTGGAGATGGCAACGTTCTGAGAAGAAA...TGACACAGCACAGACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTAGGGCTTTTGGGCACTaGGCCATCATGTGTTTAAGA +
Preference number: 5 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCRAFGH*AIMCLR
Trigger: TCTTAAACACATGATGGCCAAGTGCCCAAAAGCCCT...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CTGTGCTGTGTCAATACTAACAGATGTGAGGAGACAGACTATGGAATGGACGCTGAAGAACCTGATGGCTaGTGGTGTCTGTGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: LCCVNTNRCEETDYGMDAEEPDG*WCLCCV
Trigger: GACACAGCACAGACACCACAAGCCATCAGGTTCTTC...AGCGTCCATTCCATAGTCTGTCTCCTCACATCTGTTAGTATTGACACAGCACAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGAGAAGCTTCACCCGGTaGCCTGGGACAATGCCTTGC +
Preference number: 5 (lower is better)
Translates to: NYQSLDPHIYSEICSARGRSFTR*PGTMPC
Trigger: GCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTCT...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CAA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCCTTCCCTGCTGGCTaGGTGCAGGTTGGAGGAATG +
Preference number: 5 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTSFPAG*VQVGGM
Trigger: CATTCCTCCAACCTGCACCAAGCCAGCAGGGAAGGA...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp GCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAAGAGAAAGACAATCGGTaGATCCCATCCACCAAGTCC +
Preference number: 5 (lower is better)
Translates to: APGRQLLSFYCSCLSVLKEKDNR*IPSTKS
Trigger: GGACTTGGTGGATGGGATCAACCGATTGTCTTTCTC...TTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTGACAGTGAGGACTCCTaGGAGGAGGTGGAAGACGTG +
Preference number: 5 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTDSEDS*EEVEDV
Trigger: CACGTCTTCCACCTCCTCCAAGGAGTCCTCACTGTC...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATCATCGGGCACCGTCTTaGCCACCATCACAAACCGGT +
Preference number: 5 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDHRAPS*PPSQTG
Trigger: ACCGGTTTGTGATGGTGGCAAAGACGGTGCCCGATG...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGGGGCTTTGTAATCTCTaGTTCCAACAGCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLGLCNL*FQQLEL
Trigger: CAGTTCCAGCTGTTGGAACAAGAGATTACAAAGCCC...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GAGGGATATCATAGACGTCCTTTTGGTATCTGGATGGGTACTCGTATACGTAGCGAGTTCATGACTTTGTaGCGAATGTCCTGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: EGYHRRPFGIWMGTRIRSEFMTL*RMSWAV
Trigger: GACTGCCCAGGACATTCGCAACAAAGTCATGAACTC...GCTACGTATACGAGTACCCATCCAGATACCAAAAGGACGTCTATGATATCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp CACATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATTGCTCGCAGAGCTGGTaGCTGGAGTTCATGACTTTG +
Preference number: 5 (lower is better)
Translates to: HIYILKFAPQEGFWALGHCSQSW*LEFMTL
Trigger: CAAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCA...ATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGGCCATGACTATGGTCTaGAGCTGCTCGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: NYQSLDPHIYSEICSARGAMTMV*SCSQSW
Trigger: CCAGCTCTGCGAGCAGCTCAAGACCATAGTCATGGC...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATTGGAGGGCGGCCATCTaGGTTGCCATGACTATGGTC +
Preference number: 5 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDWRAAI*VAMTMV
Trigger: GACCATAGTCATGGCAACCAAGATGGCCGCCCTCCA...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS CCA 90 bp AGAAGGGCCAGTAGGTTCAGTCTAAGCAGCTACAAGGGCCCAGTGTaGGGAGGGAGTAAACATATCCAAGGAATTGAAGAAATCAAGATA +
Preference number: 5 (lower is better)
Translates to: RRASRFSLSSYKGPV*GGSKHIQGIEEIKI
Trigger: TATCTTGATTTCTTCAATTCCTTGGATATGTTTACTCCCTCCCCACACTGGGCCCTTGTAGCTGCTTAGACTGAACCTACTGGCCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504634.5
CDS-3UTR CAA 90 bp CTTGGGGTTACTGTTTTCTGCTGTTCGTATCAGTATTGGCATTATTACGGTTATGTCAGGATGTCTCCCTaGCGAAAGGCCAGTTCCTCG +
Preference number: 5 (lower is better)
Translates to: LGVTVFCCSYQYWHYYGYVRMSP*RKASSS
Trigger: CGAGGAACTGGCCTTTCGCAAGGGAGACATCCTGAC...ATAACCGTAATAATGCCAATACTGATACGAACAGCAGAAAACAGTAACCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAAGAAGCTTCACCCGGTaGCCTGGGACAATGCCTTGC +
Preference number: 5 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIRSFTR*PGTMPC
Trigger: GCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTCT...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CAA 90 bp TCTCCACTTAGCGTAGATCAATCAAGTCAGCCATCTCCTAAGAAATACACATTAGTAGGAAGGTGGCACTaGGTAGATGGTGTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: SPLSVDQSSQPSPKKYTLVGRWH*VDGVSG
Trigger: CCCCGAGACACCATCTACCAAGTGCCACCTTCCTAC...TAATGTGTATTTCTTAGGAGATGGCTGACTTGATTGATCTACGCTAAGTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CAA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGTAGGAAGGTGGCACTaGGTAGATGGTGTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIVGRWH*VDGVSG
Trigger: CCCCGAGACACCATCTACCAAGTGCCACCTTCCTAC...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CAA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTATCATAGACGTCCTTTaGGTATCTGGATGGGTACTC +
Preference number: 5 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVIIDVL*VSGWVL
Trigger: GAGTACCCATCCAGATACCAAAAGGACGTCTATGAT...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCCCGCTTCATCTTGTaGTGGAGGATGAGTTCCGGG +
Preference number: 5 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTSRFIL*WRMSSG
Trigger: CCCGGAACTCATCCTCCACAACAAGATGAAGCGGGA...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGCCTCTGCGTTGGTGTaGATGGTTGTGGTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIASALV*MVVVSC
Trigger: GCAGCTCACCACAACCATCAACACCAACGCAGAGGC...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTCACTCACGCCACTGTTaGTGGTGGGTAGGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSHSRHC*WWVGSE
Trigger: CTCAGAGCCTACCCACCACAAACAGTGGCGTGAGTG...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp ATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATTGCTCGCAGAGCTGGTaGCTGGAGTTCATGACTTTG +
Preference number: 5 (lower is better)
Translates to: IYILKFAPQEGFWALGHHCSQSW*LEFMTL
Trigger: CAAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCA...ATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCGCCATGACTATGGTCTaGAGCTGCTCGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFAMTMV*SCSQSW
Trigger: CCAGCTCTGCGAGCAGCTCAAGACCATAGTCATGGC...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATATGGAGGGCGGCCATCTaGGTTGCCATGACTATGGTC +
Preference number: 5 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIWRAAI*VAMTMV
Trigger: GACCATAGTCATGGCAACCAAGATGGCCGCCCTCCA...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp GGTTATACACACTGGCCACAGGAAGTTGCAAAAATTAGATGGACTCTGTGTAGCTCCAGCAAAGAGCGCTaGAACAGCTGGGCATTTCTA +
Preference number: 5 (lower is better)
Translates to: GYTHWPQEVAKIRWTLCSSSKER*NSWAFL
Trigger: TAGAAATGCCCAGCTGTTCAAGCGCTCTTTGCTGGA...GCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGGCTATGCCTCATGATTaGGAAGGTGAACACTTGCAA +
Preference number: 5 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLAMPHD*EGEHLQ
Trigger: TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGC...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAACAACAGAAAGGCCTCTACTaGCAACTGGCGGATCAAACC +
Preference number: 5 (lower is better)
Translates to: PGRQLLSFYCSCLSVLKQQKGLY*QLADQT
Trigger: GGTTTGATCCGCCAGTTGCAAGTAGAGGCCTTTCTG...TTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTATGCAGCGAGCGGACTaGCTTCTAGAGGCAGCTGTA +
Preference number: 5 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTMQRAD*LLEAAV
Trigger: TACAGCTGCCTCTAGAAGCAAGTCCGCTCGCTGCAT...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CAA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATATGCAGCGAGCGGACTaGCTTCTAGAGGCAGCTGTA +
Preference number: 5 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDMQRAD*LLEAAV
Trigger: TACAGCTGCCTCTAGAAGCAAGTCCGCTCGCTGCAT...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CAA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGCTTGCCATAAGATTCTaGGAACGTTTGCCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLLAIRF*ERLPRK
Trigger: CTTTCTGGGCAAACGTTCCAAGAATCTTATGGCAAG...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS TCA 90 bp AGCCGGGTGACCCTTTGTCTCTACTTTGCCTTCCGTGCTAAGTGTTaGCTTCTGCTGAGTTTGATTTCATTCATTTCAGCTAGACATGTC +
Preference number: 5 (lower is better)
Translates to: SRVTLCLYFAFRAKC*LLLSLISFISARHV
Trigger: GACATGTCTAGCTGAAATGAATGAAATCAAACTCAGCAGAAGTCAACACTTAGCACGGAAGGCAAAGTAGAGACAAAGGGTCACCCGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461055.2
CDS TCA 90 bp GAAAACACAGGGCCTTTTGCTGATGAGGGAGGGATGTCGTATACCTaGAGAGAAACCCGTGAGTTACCCAGAATGGAAATGTCTTATACT +
Preference number: 5 (lower is better)
Translates to: ENTGPFADEGGMSYT*RETRELPRMEMSYT
Trigger: AGTATAAGACATTTCCATTCTGGGTAACTCACGGGTTTCTCTTCAGGTATACGACATCCCTCCCTCATCAGCAAAAGGCCCTGTGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505589.1
CDS-3UTR CAA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCGCACACTCTGGGACATaGTCATATAAGGCCCTTGCC +
Preference number: 5 (lower is better)
Translates to: LLVICEYIYPWGRSISPAAHSGT*SYKALA
Trigger: GGCAAGGGCCTTATATGACAATGTCCCAGAGTGTGC...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CAA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTGCACACTCTGGGACATaGTCATATAAGGCCCTTGCC +
Preference number: 5 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTAHSGT*SYKALA
Trigger: GGCAAGGGCCTTATATGACAATGTCCCAGAGTGTGC...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CAA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCGTCAGGATGTCTCCCTaGCGAAAGGCCAGTTCCTCG +
Preference number: 5 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVVRMSP*RKASSS
Trigger: CGAGGAACTGGCCTTTCGCAAGGGAGACATCCTGAC...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CAA 90 bp AGGGGACAAGACAACAGGAACAAGACAAGCAACAGTCAATTCTTGCTTTCTAATCTGTGGGTTTGGCACTaGATAGAGCTTCTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: RGQDNRNKTSNSQFLLSNLWVWH*IELLLA
Trigger: GGCCAACAGAAGCTCTATCAAGTGCCAAACCCACAG...ATTAGAAAGCAAGAATTGACTGTTGCTTGTCTTGTTCCTGTTGTCTTGTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp GCTCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTCTGTGGGTTTGGCACTaGATAGAGCTTCTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: AQNHHKDVENNIITSWYVLWVWH*IELLLA
Trigger: GGCCAACAGAAGCTCTATCAAGTGCCAAACCCACAG...AACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CAA 90 bp GAGAAAGACGGCAAGCCTCCAAACTCAGGACACTTTATTAAAATGCTCATCAGAGTGGCCAGTGGGGACTaGGTAAATTCCCTGATTTTG +
Preference number: 5 (lower is better)
Translates to: EKDGKPPNSGHFIKMLIRVASGD*VNSLIL
Trigger: CAAAATCAGGGAATTTACCAAGTCCCCACTGGCCAC...TCTGATGAGCATTTTAATAAAGTGTCCTGAGTTTGGAGGCTTGCCGTCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp CAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGAACACTTGCAAATATACCTCTTGTTCTaGGGTGCCGTGGCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: QTRISHAMPHDLEGEHLQIYLLF*GAVASG
Trigger: CCCACTGGCCACGGCACCCAAGAACAAGAGGTATAT...TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CAA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAATATACCTCTTGTTCTaGGGTGCCGTGGCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIIYLLF*GAVASG
Trigger: CCCACTGGCCACGGCACCCAAGAACAAGAGGTATAT...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CAA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTCACCTGATATACCTCTaGTTCTTGGGTGCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSHLIYL*FLGAVA
Trigger: GGCCACGGCACCCAAGAACAAGAGGTATATCAGGTG...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CAA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTTCCTTCCCTGCTGGCTaGGTGCAGGTTGGAGGAATG +
Preference number: 5 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFSFPAG*VQVGGM
Trigger: CATTCCTCCAACCTGCACCAAGCCAGCAGGGAAGGA...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGGAACAGCTCCACCTaGTCCACTGCTGTGCGTATT +
Preference number: 5 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDRNSST*STAVRI
Trigger: AATACGCACAGCAGTGGACAAGGTGGAGCTGTTCCT...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGGGAGTCTTCAACTCGTaGCAGCTCCCGCTTCATCTT +
Preference number: 5 (lower is better)
Translates to: NYQSLDPHIYSEICSARGGVFNS*QLPLHL
Trigger: AAGATGAAGCGGGAGCTGCAACGAGTTGAAGACTCC...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAACAATCCAGATCGTCACACTaGTTCTGGGGCTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: PGRQLLSFYCSCLSVLKQSRSSH*FWGLLM
Trigger: CATCAACAAGCCCCAGAACAAGTGTGACGATCTGGA...TTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTCATCGGGCACCGTCTTaGCCACCATCACAAACCGGT +
Preference number: 5 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFHRAPS*PPSQTG
Trigger: ACCGGTTTGTGATGGTGGCAAAGACGGTGCCCGATG...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCCATCGGGCACCGTCTTaGCCACCATCACAAACCGGT +
Preference number: 5 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVHRAPS*PPSQTG
Trigger: ACCGGTTTGTGATGGTGGCAAAGACGGTGCCCGATG...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTGCCTCTGCGTTGGTGTaGATGGTTGTGGTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFASALV*MVVVSC
Trigger: GCAGCTCACCACAACCATCAACACCAACGCAGAGGC...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAACAAGAGTTCATGACTTTGTaGCGAATGTCCTGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: PGRQLLSFYCSCLSVLKQEFMTL*RMSWAV
Trigger: GACTGCCCAGGACATTCGCAACAAAGTCATGAACTC...TTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAACAACTGGAGTTCATGACTTaGTTGCGAATGTCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: PGRQLLSFYCSCLSVLKQLEFMT*LRMSWA
Trigger: TGCCCAGGACATTCGCAACAAAGTCATGAACTCCAG...TTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTTGGAGGGCGGCCATCTaGGTTGCCATGACTATGGTC +
Preference number: 5 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFWRAAI*VAMTMV
Trigger: GACCATAGTCATGGCAACCAAGATGGCCGCCCTCCA...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS TCA 90 bp CATACAGATCTTGTCCTCATGGGCAGTGTAGATGTTTACAGACACTaGGCCCACTTGATCTGCTGTTTCATGATCCAACTCAGACATTTG +
Preference number: 5 (lower is better)
Translates to: HTDLVLMGSVDVYRH*AHLICCFMIQLRHL
Trigger: CAAATGTCTGAGTTGGATCATGAAACAGCAGATCAAGTGGGCTCAGTGTCTGTAAACATCTACACTGCCCATGAGGACAAGATCTGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508800.1
CDS CCA 90 bp ATCAACTACATGTGGCTGAATCTGCAGCTTCATTCATTGGGGAAGTaGTATGTCATCCATTCCAAGGTTTTGACTTCCTCTCTACCTCTG +
Preference number: 5 (lower is better)
Translates to: INYMWLNLQLHSLGK*YVIHSKVLTSSLPL
Trigger: CAGAGGTAGAGAGGAAGTCAAAACCTTGGAATGGATGACATACCACTTCCCCAATGAATGAAGCTGCAGATTCAGCCACATGTAGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504634.5
CDS-3UTR CAA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTGTGGGTTTGGCACTaGATAGAGCTTCTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQILWVWH*IELLLA
Trigger: GGCCAACAGAAGCTCTATCAAGTGCCAAACCCACAG...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CAA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTGTGGCCAGTGGGGACTaGGTAAATTCCCTGATTTTG +
Preference number: 5 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTVASGD*VNSLIL
Trigger: CAAAATCAGGGAATTTACCAAGTCCCCACTGGCCAC...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CAA 90 bp GCTCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTGATGTCGTATACCCCTaGAGTGGTATGAGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: AQNHHKDVENNIITSWYVDVVYP*SGMRRR
Trigger: CCTCCTTCTCATACCACTCAAGGGGTATACGACATC...AACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTGATGTCGTATACCCCTaGAGTGGTATGAGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTDVVYP*SGMRRR
Trigger: CCTCCTTCTCATACCACTCAAGGGGTATACGACATC...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp GCTCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTGAGAAAGACAATCGGTaGATCCCATCCACCAAGTCC +
Preference number: 5 (lower is better)
Translates to: AQNHHKDVENNIITSWYVEKDNR*IPSTKS
Trigger: GGACTTGGTGGATGGGATCAACCGATTGTCTTTCTC...AACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTTTGCAACAGCTCCCTaGACAAAGTGGAGGTACTCC +
Preference number: 5 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTFATAP*TKWRYS
Trigger: GGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAAA...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCTCCCGCTTCATCTTGTaGTGGAGGATGAGTTCCGGG +
Preference number: 5 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVSRFIL*WRMSSG
Trigger: CCCGGAACTCATCCTCCACAACAAGATGAAGCGGGA...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAAGCTCCCGCTTCATCTaGTTGTGGAGGATGAGTTCC +
Preference number: 5 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQISSRFI*LWRMSS
Trigger: GGAACTCATCCTCCACAACAAGATGAAGCGGGAGCT...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCAGCTCCCGCTTCATCTaGTTGTGGAGGATGAGTTCC +
Preference number: 5 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFSSRFI*LWRMSS
Trigger: GGAACTCATCCTCCACAACAAGATGAAGCGGGAGCT...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTGGAGTCTTCAACTCGTaGCAGCTCCCGCTTCATCTT +
Preference number: 5 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSGVFNS*QLPLHL
Trigger: AAGATGAAGCGGGAGCTGCAACGAGTTGAAGACTCC...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp ATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATCATTTGTTCTGGGGCTTGTaGATGGCCAAGATATTCAGG +
Preference number: 5 (lower is better)
Translates to: IYILKFAPQEGFWALGHHLFWGL*MAKIFR
Trigger: CCTGAATATCTTGGCCATCAACAAGCCCCAGAACAA...ATGATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATTCCAGATCGTCACACTaGTTCTGGGGCTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDSRSSH*FWGLLM
Trigger: CATCAACAAGCCCCAGAACAAGTGTGACGATCTGGA...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTGCTCGCAGAGCTGGTaGCTGGAGTTCATGACTTTG +
Preference number: 5 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSCSQSW*LEFMTL
Trigger: CAAAGTCATGAACTCCAGCAACCAGCTCTGCGAGCA...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATTCCAGCAAAGAGCGCTaGAACAGCTGGGCATTTCTA +
Preference number: 5 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDSSKER*NSWAFL
Trigger: TAGAAATGCCCAGCTGTTCAAGCGCTCTTTGCTGGA...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp GCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAAAGCTGTCTCTCAGTATaGAAACAACCCAATCCTAAC +
Preference number: 5 (lower is better)
Translates to: APGRQLLSFYCSCLSVLKSCLSV*KQPNPN
Trigger: GTTAGGATTGGGTTGTTTCAATACTGAGAGACAGCT...TTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GTGACTATCTGTGAGATAGTGGAAGGGGTTATACACACTGGCCACAGGAAGTTGAACCATTCCCCTATTTaGGTGAACAATCATAGTCTG +
Preference number: 5 (lower is better)
Translates to: VTICEIVEGVIHTGHRKLNHSPI*VNNHSL
Trigger: CAGACTATGATTGTTCACCAAAATAGGGGAATGGTT...CAACTTCCTGTGGCCAGTGTGTATAACCCCTTCCACTATCTCACAGATAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTAACCATTCCCCTATTTaGGTGAACAATCATAGTCTG +
Preference number: 5 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVNHSPI*VNNHSL
Trigger: CAGACTATGATTGTTCACCAAAATAGGGGAATGGTT...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CATGGGGTAGAAGTATTTCACCTGCCCCATGAAGAACCTGATGGCTTGTGGTGTTGGCAGAGTAGGACTTaGAGAATTATAATAGCAGTT +
Preference number: 5 (lower is better)
Translates to: HGVEVFHLPHEEPDGLWCWQSRT*RIIIAV
Trigger: AACTGCTATTATAATTCTCAAAGTCCTACTCTGCCA...ACACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCATGCAGCTCTGGATGTaGGAAAGGACAATTCCGGCG +
Preference number: 5 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFMQLWM*ERTIPA
Trigger: CGCCGGAATTGTCCTTTCCAACATCCAGAGCTGCAT...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448183.6
ENST00000504387.5
CDS TCA 90 bp GGCAAGCCTCCAAACTCAGGACACTTTATTAAAATGCTCATCAGATaGGATCTTTTCAGTGGAGGTTCACAAGCTGGTTTGTTTAGAGGC +
Preference number: 5 (lower is better)
Translates to: GKPPNSGHFIKMLIR*DLFSGGSQAGLFRG
Trigger: GCCTCTAAACAAACCAGCTTGTGAACCTCCACTGAAAAGATCTCATCTGATGAGCATTTTAATAAAGTGTCCTGAGTTTGGAGGCTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS TCA 90 bp AAGGAAAAATGCAGTCTTGACATGGCGACATCAACTACATGTGGCTaGATCTGCAGCTTCATTCATTGGGGAAGTGGTATGTCATCCATT +
Preference number: 5 (lower is better)
Translates to: KEKCSLDMATSTTCG*ICSFIHWGSGMSSI
Trigger: AATGGATGACATACCACTTCCCCAATGAATGAAGCTGCAGATTCAGCCACATGTAGTTGATGTCGCCATGTCAAGACTGCATTTTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504634.5
CDS-3UTR CAA 90 bp ATCACTTGTGGTTTGACGGTCTTGATGCATCTCATCTCTTCTTCCAGCATTTTATTGATAGAGCTTCTGTaGGCCAAAGGTCTGCTGCAT +
Preference number: 5 (lower is better)
Translates to: ITCGLTVLMHLISSSSILLIELL*AKGLLH
Trigger: ATGCAGCAGACCTTTGGCCAACAGAAGCTCTATCAA...TAAAATGCTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATTTGATAGAGCTTCTGTaGGCCAAAGGTCTGCTGCAT +
Preference number: 5 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDLIELL*AKGLLH
Trigger: ATGCAGCAGACCTTTGGCCAACAGAAGCTCTATCAA...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CAA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGTGGCCAGTGGGGACTaGGTAAATTCCCTGATTTTG +
Preference number: 5 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIVASGD*VNSLIL
Trigger: CAAAATCAGGGAATTTACCAAGTCCCCACTGGCCAC...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CAA 90 bp AAATGTGTTTTTCCAAGTCTAGGAGATGAAGATATTTATCCAAGAGAAAGACGGCACCTGATATACCTCTaGTTCTTGGGTGCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: KCVFPSLGDEDIYPRERRHLIYL*FLGAVA
Trigger: GGCCACGGCACCCAAGAACAAGAGGTATATCAGGTG...CCGTCTTTCTCTTGGATAAATATCTTCATCTCCTAGACTTGGAAAAACACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp AGGGGACAAGACAACAGGAACAAGACAAGCAACAGTCAATTCTTGCTTTCTAATTTAATAGAGGTGAGATaGCTTTTCAAGCCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: RGQDNRNKTSNSQFLLSNLIEVR*LFKPGG
Trigger: GCCCCCAGGCTTGAAAAGCAATCTCACCTCTATTAA...ATTAGAAAGCAAGAATTGACTGTTGCTTGTCTTGTTCCTGTTGTCTTGTCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp GTCCCACATACAATCAAAGATAAACAGGAATTCAGGGGACAAGACAACAGGAACCTTATCACTTGTGGTTaGACGGTCTTGATGCATCTC +
Preference number: 5 (lower is better)
Translates to: VPHTIKDKQEFRGQDNRNLITCG*TVLMHL
Trigger: GAGATGCATCAAGACCGTCAAACCACAAGTGATAAG...GTTCCTGTTGTCTTGTCCCCTGAATTCCTGTTTATCTTTGATTGTATGTGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp CCAGGGAGGCAATTGCTCTCCTTTTATTGTAGCTGTCTCTCAGTATTGAAACAAATCATAGACGTCCTTTaGGTATCTGGATGGGTACTC +
Preference number: 5 (lower is better)
Translates to: PGRQLLSFYCSCLSVLKQIIDVL*VSGWVL
Trigger: GAGTACCCATCCAGATACCAAAAGGACGTCTATGAT...TTGTTTCAATACTGAGAGACAGCTACAATAAAAGGAGAGCAATTGCCTCCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATGATGTCATACACCCCTaGAGGTTTTATCTCTCCCAC +
Preference number: 5 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDDVIHP*RFYLSH
Trigger: GTGGGAGAGATAAAACCTCAAGGGGTGTATGACATC...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTGAGAAAGACAATCGGTaGATCCCATCCACCAAGTCC +
Preference number: 5 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSEKDNR*IPSTKS
Trigger: GGACTTGGTGGATGGGATCAACCGATTGTCTTTCTC...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTCCAGATCGTCACACTaGTTCTGGGGCTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSSRSSH*FWGLLM
Trigger: CATCAACAAGCCCCAGAACAAGTGTGACGATCTGGA...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCGGGCTTTGTAATCTCTaGTTCCAACAGCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: LLVICEYIYPWGRSISPAGLCNL*FQQLEL
Trigger: CAGTTCCAGCTGTTGGAACAAGAGATTACAAAGCCC...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTAGTGCGTCAATGGCGTaGAGAAGGGAAATGAAATGG +
Preference number: 5 (lower is better)
Translates to: GHTKARGQVFCTVYVSDTSASMA*RREMKW
Trigger: CCATTTCATTTCCCTTCTCAACGCCATTGACGCACT...AGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTGAGTTCATGACTTTGTaGCGAATGTCCTGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSEFMTL*RMSWAV
Trigger: GACTGCCCAGGACATTCGCAACAAAGTCATGAACTC...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTGGAGTTCATGACTTaGTTGCGAATGTCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQILEFMT*LRMSWA
Trigger: TGCCCAGGACATTCGCAACAAAGTCATGAACTCCAG...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp CTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCACCTGCCAGGGCTTTTGGGCACTaGGCCATCATGTGTTTAAGA +
Preference number: 5 (lower is better)
Translates to: LLVICEYIYPWGRSISPARAFGH*AIMCLR
Trigger: TCTTAAACACATGATGGCCAAGTGCCCAAAAGCCCT...GGCAGGTGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GGTTATACACACTGGCCACAGGAAGTTGCAAAAATTAGATGGACTCTGTGTAGCAGCTGTCTCTCAGTATaGAAACAACCCAATCCTAAC +
Preference number: 5 (lower is better)
Translates to: GYTHWPQEVAKIRWTLCSSCLSV*KQPNPN
Trigger: GTTAGGATTGGGTTGTTTCAATACTGAGAGACAGCT...GCTACACAGAGTCCATCTAATTTTTGCAACTTCCTGTGGCCAGTGTGTATAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp GAGACAGACTATGGAATGGACGCTGTGACTATCTGTGAGATAGTGGAAGGGGTTTGGCAGAGTAGGACTTaGAGAATTATAATAGCAGTT +
Preference number: 5 (lower is better)
Translates to: ETDYGMDAVTICEIVEGVWQSRT*RIIIAV
Trigger: AACTGCTATTATAATTCTCAAAGTCCTACTCTGCCA...AACCCCTTCCACTATCTCACAGATAGTCACAGCGTCCATTCCATAGTCTGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATTTCCTTGTCCACATTTaGCCCCAAGGAATGATGCAG +
Preference number: 5 (lower is better)
Translates to: HGHTKARGQVFCTVYVSDFLVHI*PQGMMQ
Trigger: CTGCATCATTCCTTGGGGCAAAATGTGGACAAGGAA...ATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504387.5
CDS CCA 90 bp TTACCCCATACTTCTGTGTTTGGAAGGAAAAATGCAGTCTTGACATaGCGACATCAACTACATGTGGCTGAATCTGCAGCTTCATTCATT +
Preference number: 5 (lower is better)
Translates to: LPHTSVFGRKNAVLT*RHQLHVAESAASFI
Trigger: AATGAATGAAGCTGCAGATTCAGCCACATGTAGTTGATGTCGCCATGTCAAGACTGCATTTTTCCTTCCAAACACAGAAGTATGGGGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504634.5
CDS-3UTR CAA 90 bp GCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATACTTCTTGATAGAGCTTCTGTaGGCCAAAGGTCTGCTGCAT +
Preference number: 5 (lower is better)
Translates to: AYKSTWTSFLYSLCLRYFLIELL*AKGLLH
Trigger: ATGCAGCAGACCTTTGGCCAACAGAAGCTCTATCAA...GAAGTATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CAA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTGATAGAGCTTCTGTaGGCCAAAGGTCTGCTGCAT +
Preference number: 5 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSLIELL*AKGLLH
Trigger: ATGCAGCAGACCTTTGGCCAACAGAAGCTCTATCAA...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CAA 90 bp AGGGGACAAGACAACAGGAACAAGACAAGCAACAGTCAATTCTTGCTTTCTAATGTAAATTCCCTGATTTaGGTAGGAAGGTGGCACTTG +
Preference number: 5 (lower is better)
Translates to: RGQDNRNKTSNSQFLLSNVNSLI*VGRWHL
Trigger: CAAGTGCCACCTTCCTACCAAAATCAGGGAATTTAC...ATTAGAAAGCAAGAATTGACTGTTGCTTGTCTTGTTCCTGTTGTCTTGTCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp TCAGATGTATGCTTGCCTATGAGGCTGGCAGAAGGAAACAAAATTCTCTCTGGACTGGGTCTTTTTCTGTaGCTTATTGGAAGAATTAGG +
Preference number: 5 (lower is better)
Translates to: SDVCLPMRLAEGNKILSGLGLFL*LIGRIR
Trigger: CCTAATTCTTCCAATAAGCAACAGAAAAAGACCCAG...TCCAGAGAGAATTTTGTTTCCTTCTGCCAGCCTCATAGGCAAGCATACATCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp ATCACTTGTGGTTTGACGGTCTTGATGCATCTCATCTCTTCTTCCAGCATTTTAATCCATGCCATGTCCTaGTCTGAGATGCTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: ITCGLTVLMHLISSSSILIHAMS*SEMLFF
Trigger: AAAGAAGAGCATCTCAGACAAGGACATGGCATGGAT...TAAAATGCTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCAAAACACAGGGCCTTTaGCTGATGAGGGAGGGATGT +
Preference number: 5 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVKTQGL*LMREGC
Trigger: ACATCCCTCCCTCATCAGCAAAAGGCCCTGTGTTTT...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGATGTCATACACCCCTaGAGGTTTTATCTCTCCCAC +
Preference number: 5 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIDVIHP*RFYLSH
Trigger: GTGGGAGAGATAAAACCTCAAGGGGTGTATGACATC...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTGATGTCATACACCCCTaGAGGTTTTATCTCTCCCAC +
Preference number: 5 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSDVIHP*RFYLSH
Trigger: GTGGGAGAGATAAAACCTCAAGGGGTGTATGACATC...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTTTTGCAACAGCTCCCTaGACAAAGTGGAGGTACTCC +
Preference number: 5 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFFATAP*TKWRYS
Trigger: GGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAAA...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGGAGTCTTCAACTCGTaGCAGCTCCCGCTTCATCTT +
Preference number: 5 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGGVFNS*QLPLHL
Trigger: AAGATGAAGCGGGAGCTGCAACGAGTTGAAGACTCC...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp TCTCCACTTAGCGTAGATCAATCAAGTCAGCCATCTCCTAAGAAATACACATTATTGTTCTGGGGCTTGTaGATGGCCAAGATATTCAGG +
Preference number: 5 (lower is better)
Translates to: SPLSVDQSSQPSPKKYTLLFWGL*MAKIFR
Trigger: CCTGAATATCTTGGCCATCAACAAGCCCCAGAACAA...TAATGTGTATTTCTTAGGAGATGGCTGACTTGATTGATCTACGCTAAGTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGGGCTTTGTAATCTCTaGTTCCAACAGCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIGLCNL*FQQLEL
Trigger: CAGTTCCAGCTGTTGGAACAAGAGATTACAAAGCCC...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGGAAATGGGTCTCACATaGGTCATAGTAGAAGCACAG +
Preference number: 5 (lower is better)
Translates to: NYQSLDPHIYSEICSARGEMGLT*VIVEAQ
Trigger: CTGTGCTTCTACTATGACCAATGTGAGACCCATTTC...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTAGTGCGTCAATGGCGTaGAGAAGGGAAATGAAATGG +
Preference number: 5 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSSASMA*RREMKW
Trigger: CCATTTCATTTCCCTTCTCAACGCCATTGACGCACT...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCCTGGAGTTCATGACTTaGTTGCGAATGTCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVLEFMT*LRMSWA
Trigger: TGCCCAGGACATTCGCAACAAAGTCATGAACTCCAG...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp CAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGAACACTTGCAATTTCTTCTCAGAACGTaGCCATCTCCAGCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: QTRISHAMPHDLEGEHLQFLLRT*PSPAKS
Trigger: GCTCTTTGCTGGAGATGGCAACGTTCTGAGAAGAAA...TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp AACTATCAGAGCTTGGATCCACATATATATTCTGAAATTTGCTCCGCAAGAGGGGCTATGCCTCATGATTaGGAAGGTGAACACTTGCAA +
Preference number: 5 (lower is better)
Translates to: NYQSLDPHIYSEICSARGAMPHD*EGEHLQ
Trigger: TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGC...CCCTCTTGCGGAGCAAATTTCAGAATATATATGTGGATCCAAGCTCTGATAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTAGGGCTTTTGGGCACTaGGCCATCATGTGTTTAAGA +
Preference number: 5 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSRAFGH*AIMCLR
Trigger: TCTTAAACACATGATGGCCAAGTGCCCAAAAGCCCT...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CACATATATATTCTGAAATTTGCTCCGCAAGAGGGCTTTTGGGCACTTGGCCATAACCATTCCCCTATTTaGGTGAACAATCATAGTCTG +
Preference number: 5 (lower is better)
Translates to: HIYILKFAPQEGFWALGHNHSPI*VNNHSL
Trigger: CAGACTATGATTGTTCACCAAAATAGGGGAATGGTT...ATGGCCAAGTGCCCAAAAGCCCTCTTGCGGAGCAAATTTCAGAATATATATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp CACAAATGCAGAAGATTGAACAGCCCCAGGGAGGCAATTGCTCTCCTTTTATTGTGGCAGAGTAGGACTTaGAGAATTATAATAGCAGTT +
Preference number: 5 (lower is better)
Translates to: HKCRRLNSPREAIALLLLWQSRT*RIIIAV
Trigger: AACTGCTATTATAATTCTCAAAGTCCTACTCTGCCA...CAATAAAAGGAGAGCAATTGCCTCCCTGGGGCTGTTCAATCTTCTGCATTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS TCA 90 bp GTTTTCATAACTCTACTTGAAGAACATATGATGTTTGCCAGTGTCTaGCATTACGGACCTCACAGCTTACTGAATCCAAGTGTAGGATGG +
Preference number: 5 (lower is better)
Translates to: VFITLLEEHMMFASV*HYGPHSLLNPSVGW
Trigger: CCATCCTACACTTGGATTCAGTAAGCTGTGAGGTCCGTAATGTCAGACACTGGCAAACATCATATGTTCTTCAAGTAGAGTTATGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000448183.6
ENST00000459670.2
ENST00000468612.5
ENST00000504387.5
ENST00000504634.5
ENST00000508546.5
ENST00000512665.5
ENST00000513989.5
ENST00000514660.1
CDS-3UTR CAA 90 bp TCTCCACTTAGCGTAGATCAATCAAGTCAGCCATCTCCTAAGAAATACACATTAGTAAATTCCCTGATTTaGGTAGGAAGGTGGCACTTG +
Preference number: 5 (lower is better)
Translates to: SPLSVDQSSQPSPKKYTLVNSLI*VGRWHL
Trigger: CAAGTGCCACCTTCCTACCAAAATCAGGGAATTTAC...TAATGTGTATTTCTTAGGAGATGGCTGACTTGATTGATCTACGCTAAGTGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379446.10
ENST00000448183.6
CDS-3UTR CAA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTGTAAATTCCCTGATTTaGGTAGGAAGGTGGCACTTG +
Preference number: 5 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSVNSLI*VGRWHL
Trigger: CAAGTGCCACCTTCCTACCAAAATCAGGGAATTTAC...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
CDS-3UTR CAA 90 bp ATCACTTGTGGTTTGACGGTCTTGATGCATCTCATCTCTTCTTCCAGCATTTTATCATCTGTAGAGTTCTaGGGGTTACTGTTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: ITCGLTVLMHLISSSSILSSVEF*GLLFSA
Trigger: AGCAGAAAACAGTAACCCCAAGAACTCTACAGATGA...TAAAATGCTGGAAGAAGAGATGAGATGCATCAAGACCGTCAAACCACAAGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp TCAGATGTATGCTTGCCTATGAGGCTGGCAGAAGGAAACAAAATTCTCTCTGGATTACTAGGTCAAACTTaGGGAGAAGAGTTAATAGAG +
Preference number: 5 (lower is better)
Translates to: SDVCLPMRLAEGNKILSGLLGQT*GEELIE
Trigger: CTCTATTAACTCTTCTCCCAAAGTTTGACCTAGTAA...TCCAGAGAGAATTTTGTTTCCTTCTGCCAGCCTCATAGGCAAGCATACATCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp ACAAACATGAATACATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTATCATAGACGTCCTTTaGGTATCTGGATGGGTACTC +
Preference number: 5 (lower is better)
Translates to: TNMNTWAYKSTWTSFLYSIIDVL*VSGWVL
Trigger: GAGTACCCATCCAGATACCAAAAGGACGTCTATGAT...ACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCATGTATTCATGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp CTTCTTCTCTTGGTAATATGTGAATACATTTACCCATGGGGTAGAAGTATTTCATTTGCAACAGCTCCCTaGACAAAGTGGAGGTACTCC +
Preference number: 5 (lower is better)
Translates to: LLLLVICEYIYPWGRSISFATAP*TKWRYS
Trigger: GGAGTACCTCCACTTTGTCAAGGGAGCTGTTGCAAA...TGAAATACTTCTACCCCATGGGTAAATGTATTCACATATTACCAAGAGAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCTTGTTCTGGGGCTTGTaGATGGCCAAGATATTCAGG +
Preference number: 5 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVLFWGL*MAKIFR
Trigger: CCTGAATATCTTGGCCATCAACAAGCCCCAGAACAA...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCCACTTGTTCTGGGGCTaGTTGATGGCCAAGATATTC +
Preference number: 5 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVHLFWG*LMAKIF
Trigger: GAATATCTTGGCCATCAACAAGCCCCAGAACAAGTG...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTTCCAGATCGTCACACTaGTTCTGGGGCTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGSRSSH*FWGLLM
Trigger: CATCAACAAGCCCCAGAACAAGTGTGACGATCTGGA...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp ATGGGCATACAAAAGCACGTGGACAAGTTTTCTGTACAGTTTATGTCTCAGATAGAAATGGGTCTCACATaGGTCATAGTAGAAGCACAG +
Preference number: 5 (lower is better)
Translates to: MGIQKHVDKFSVQFMSQIEMGLT*VIVEAQ
Trigger: CTGTGCTTCTACTATGACCAATGTGAGACCCATTTC...TATCTGAGACATAAACTGTACAGAAAACTTGTCCACGTGCTTTTGTATGCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGAGTTCATGACTTTGTaGCGAATGTCCTGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGEFMTL*RMSWAV
Trigger: GACTGCCCAGGACATTCGCAACAAAGTCATGAACTC...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp TTTACAAAAACCAGACAGTATTTCCAGTTTTCCTTAGTAACCGTTAACGCAGTCTTTCTTCTCAGAACGTaGCCATCTCCAGCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: FTKTRQYFQFSLVTVNAVFLLRT*PSPAKS
Trigger: GCTCTTTGCTGGAGATGGCAACGTTCTGAGAAGAAA...GACTGCGTTAACGGTTACTAAGGAAAACTGGAAATACTGTCTGGTTTTTGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000504387.5
ENST00000620854.4
CDS-3UTR CAA 90 bp TCTCCACTTAGCGTAGATCAATCAAGTCAGCCATCTCCTAAGAAATACACATTAGCTATGCCTCATGATTaGGAAGGTGAACACTTGCAA +
Preference number: 5 (lower is better)
Translates to: SPLSVDQSSQPSPKKYTLAMPHD*EGEHLQ
Trigger: TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGC...TAATGTGTATTTCTTAGGAGATGGCTGACTTGATTGATCTACGCTAAGTGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS TCA 90 bp GCGTTTTACTCTTCTGACCAGTTTCTTCGTTTTCATAACTCTACTTaGAGAACATATGATGTTTGCCAGTGTCTGACATTACGGACCTCA +
Preference number: 5 (lower is better)
Translates to: AFYSSDQFLRFHNST*RTYDVCQCLTLRTS
Trigger: TGAGGTCCGTAATGTCAGACACTGGCAAACATCATATGTTCTTCAAGTAGAGTTATGAAAACGAAGAAACTGGTCAGAAGAGTAAAACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000397378.7
ENST00000448183.6
ENST00000459670.2
ENST00000468612.5
ENST00000504387.5
ENST00000504634.5
ENST00000508546.5
ENST00000512665.5
ENST00000513989.5
ENST00000514660.1
CDS-3UTR CAA 90 bp AAAAGAGTTTTCCAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGAATCAGATGTATGCTaGCCTATGAGGCTGGCAGAA +
Preference number: 5 (lower is better)
Translates to: KRVFQTRISHAMPHDLEGESDVC*PMRLAE
Trigger: TTCTGCCAGCCTCATAGGCAAGCATACATCTGATTC...ACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTGGAAAACTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS-3UTR CAA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTGAAATGGGTCTCACATaGGTCATAGTAGAAGCACAG +
Preference number: 5 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFEMGLT*VIVEAQ
Trigger: CTGTGCTTCTACTATGACCAATGTGAGACCCATTTC...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS TCA 90 bp GTTTTCATAACTCTACTTGAAGAACATATGATGTTTGCCAGTGTCTaGCATTACGGACCTCACAGCTTACTGAATCTGCAAATATCTCCT +
Preference number: 5 (lower is better)
Translates to: VFITLLEEHMMFASV*HYGPHSLLNLQISP
Trigger: AGGAGATATTTGCAGATTCAGTAAGCTGTGAGGTCCGTAATGTCAGACACTGGCAAACATCATATGTTCTTCAAGTAGAGTTATGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397378.7
CDS-3UTR CAA 90 bp CTTGGGGTTACTGTTTTCTGCTGTTCGTATCAGTATTGGCATTATTACGGTTATCTGTTCGTATCAGTATaGGCATTATTACGGTTATCA +
Preference number: 5 (lower is better)
Translates to: LGVTVFCCSYQYWHYYGYLFVSV*ALLRLS
Trigger: TGATAACCGTAATAATGCCAATACTGATACGAACAG...ATAACCGTAATAATGCCAATACTGATACGAACAGCAGAAAACAGTAACCCCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS-3UTR CAA 90 bp CAAACAAGAATAAGTCATGCTATGCCTCATGATTTGGAAGGTGAACACTTGCAACTGAACTATCAGAGCTaGGATCCACATATATATTCT +
Preference number: 5 (lower is better)
Translates to: QTRISHAMPHDLEGEHLQLNYQS*DPHIYS
Trigger: AGAATATATATGTGGATCCAAGCTCTGATAGTTCAG...TTGCAAGTGTTCACCTTCCAAATCATGAGGCATAGCATGACTTATTCTTGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS-3UTR CAA 90 bp TCAGAATCATCACAAGGACGTGGAGAACAATATTATAACCAGCTGGTATGTTTTCTGAACTATCAGAGCTaGGATCCACATATATATTCT +
Preference number: 5 (lower is better)
Translates to: SESSQGRGEQYYNQLVCFLNYQS*DPHIYS
Trigger: AGAATATATATGTGGATCCAAGCTCTGATAGTTCAG...AAAACATACCAGCTGGTTATAATATTGTTCTCCACGTCCTTGTGATGATTCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379446.10
ENST00000448183.6
ENST00000620854.4
CDS TCA 90 bp AACTTGACAGCACTGTTGAATCATTGTCTTCATTTACTTATGAGATaGTTGGCATTGTCCTTTAAAGCAGAACAACTTGAGCTAAAGCTA +
Preference number: 5 (lower is better)
Translates to: NLTALLNHCLHLLMR*LALSFKAEQLELKL
Trigger: TAGCTTTAGCTCAAGTTGTTCTGCTTTAAAGGACAATGCCAATCATCTCATAAGTAAATGAAGACAATGATTCAACAGTGCTGTCAAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461055.2
CDS TCA 72 bp TGCGGTGCCCGCCCCTCCATTGAGTGCAGCGCTAGATaGAAGCGAGAAGGTCCCGGGCAGAGCCGCTTGTCA +
Preference number: 6 (lower is better)
Translates to: CGARPSIECSAR*KREGPGQSRLS
Trigger: TGACAAGCGGCTCTGCCCGGGACCTTCTCGCTTTCATCTAGCGCTGCACTCAATGGAGGGGCGGGCACCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379433.5
ENST00000379446.10
ENST00000620854.4
CDS CAA 72 bp TGCCCAAGTGTAGGATGGAACCGCTGGTGGATCATCTaGCCTCCCCGACGCTCTGGCCCTCTCTGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: CPSVGWNRWWII*PPRRSGPLWAG
Trigger: GCCTGCCCAGAGAGGGCCAGAGCGTCGGGGAGGCAAGATGATCCACCAGCGGTTCCATCCTACACTTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508800.1
CDS CAA 72 bp TCTCCAAGTGTAGGATGGAACCGCTGGTGGATCATCTaGCCTCCCCGACGCTCTGGCCCTCTCTGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: SPSVGWNRWWII*PPRRSGPLWAG
Trigger: GCCTGCCCAGAGAGGGCCAGAGCGTCGGGGAGGCAAGATGATCCACCAGCGGTTCCATCCTACACTTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397378.7
ENST00000461055.2
CDS CAA 72 bp AATCCAAGTGTAGGATGGAACCGCTGGTGGATCATCTaGCCTCCCCGACGCTCTGGCCCTCTCTGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: NPSVGWNRWWII*PPRRSGPLWAG
Trigger: GCCTGCCCAGAGAGGGCCAGAGCGTCGGGGAGGCAAGATGATCCACCAGCGGTTCCATCCTACACTTGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000448183.6
ENST00000459670.2
ENST00000468612.5
ENST00000504387.5
ENST00000504634.5
ENST00000508546.5
ENST00000512665.5
ENST00000513989.5
ENST00000514660.1
CDS CCA 72 bp GAGATCCAATGCCCAAGTGTAGGATGGAACCGCTGGTaGATCATCTTGCCTCCCCGACGCTCTGGCCCTCTC +
Preference number: 6 (lower is better)
Translates to: EIQCPSVGWNRW*IILPPRRSGPL
Trigger: GAGAGGGCCAGAGCGTCGGGGAGGCAAGATGATCCACCAGCGGTTCCATCCTACACTTGGGCATTGGATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508800.1
CDS CAA 90 bp ACACTAGTTAAGACAGCATTAAGCACTGCGGTGCCCGCCCCTCCATaGAGTGCAGCGCTAGATGAAAGCGAGAAGGTCCCGGGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: TLVKTALSTAVPAPP*SAALDESEKVPGRA
Trigger: GGCTCTGCCCGGGACCTTCTCGCTTTCATCTAGCGCTGCACTCAATGGAGGGGCGGGCACCGCAGTGCTTAATGCTGTCTTAACTAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379433.5
ENST00000379446.10
ENST00000620854.4
CDS CCA 72 bp CAAGAGATCCAATGCCCAAGTGTAGGATGGAACCGCTaGTGGATCATCTTGCCTCCCCGACGCTCTGGCCCT +
Preference number: 6 (lower is better)
Translates to: QEIQCPSVGWNR*WIILPPRRSGP
Trigger: AGGGCCAGAGCGTCGGGGAGGCAAGATGATCCACCAGCGGTTCCATCCTACACTTGGGCATTGGATCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508800.1
CDS CAA 72 bp AAGACAGCATTAAGCACTGCGGTGCCCGCCCCTCCATaGAGTGCAGCGCTAGATGAAAGCGAGAAGGTCCCG +
Preference number: 6 (lower is better)
Translates to: KTALSTAVPAPP*SAALDESEKVP
Trigger: CGGGACCTTCTCGCTTTCATCTAGCGCTGCACTCAATGGAGGGGCGGGCACCGCAGTGCTTAATGCTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379433.5
ENST00000379446.10
ENST00000620854.4
CDS GCA 72 bp AAAGCTGAGGCCCACTCATTACCTGTAGGAGTGATTTaGCAAGGCGGCAGGGCAGGTCAGACCCGATTCCAG +
Preference number: 6 (lower is better)
Translates to: KAEAHSLPVGVI*QGGRAGQTRFQ
Trigger: CTGGAATCGGGTCTGACCTGCCCTGCCGCCTTGGCAAATCACTCCTACAGGTAATGAGTGGGCCTCAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512665.5
CDS CCA 72 bp AGCTTACTGAATCCAAGTGTAGGATGGAACCGCTGGTaGATCATCTTGCCTCCCCGACGCTCTGGCCCTCTC +
Preference number: 6 (lower is better)
Translates to: SLLNPSVGWNRW*IILPPRRSGPL
Trigger: GAGAGGGCCAGAGCGTCGGGGAGGCAAGATGATCCACCAGCGGTTCCATCCTACACTTGGATTCAGTAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000448183.6
ENST00000459670.2
ENST00000468612.5
ENST00000504387.5
ENST00000504634.5
ENST00000508546.5
ENST00000512665.5
ENST00000513989.5
ENST00000514660.1
CDS CCA 72 bp CACAGCTTACTGAATCCAAGTGTAGGATGGAACCGCTaGTGGATCATCTTGCCTCCCCGACGCTCTGGCCCT +
Preference number: 6 (lower is better)
Translates to: HSLLNPSVGWNR*WIILPPRRSGP
Trigger: AGGGCCAGAGCGTCGGGGAGGCAAGATGATCCACCAGCGGTTCCATCCTACACTTGGATTCAGTAAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000448183.6
ENST00000459670.2
ENST00000468612.5
ENST00000504387.5
ENST00000504634.5
ENST00000508546.5
ENST00000512665.5
ENST00000513989.5
ENST00000514660.1
CDS CAA 72 bp GCCTCATCCAATCAGTTGAAGGCCTGTAGGAGTGATTaGCCAAGGCGGCAGGGCAGGTCAGACCCGATTCCA +
Preference number: 6 (lower is better)
Translates to: ASSNQLKACRSD*PRRQGRSDPIP
Trigger: TGGAATCGGGTCTGACCTGCCCTGCCGCCTTGGCAAATCACTCCTACAGGCCTTCAACTGATTGGATGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468612.5
ENST00000508546.5
CDS CCA 72 bp TATTCATTCTCTCCAAGTGTAGGATGGAACCGCTGGTaGATCATCTTGCCTCCCCGACGCTCTGGCCCTCTC +
Preference number: 6 (lower is better)
Translates to: YSFSPSVGWNRW*IILPPRRSGPL
Trigger: GAGAGGGCCAGAGCGTCGGGGAGGCAAGATGATCCACCAGCGGTTCCATCCTACACTTGGAGAGAATGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397378.7
ENST00000461055.2
CDS CAA 90 bp GTCCTGCTGCATGCTCATGTTTCCCTCTCCATGCAGCGAGCGGACTaGCTTCTAGAGGCAGCTGTAAGCATTTCCCTACTGAGCAACCAC +
Preference number: 6 (lower is better)
Translates to: VLLHAHVSLSMQRAD*LLEAAVSISLLSNH
Trigger: GTGGTTGCTCAGTAGGGAAATGCTTACAGCTGCCTCTAGAAGCAAGTCCGCTCGCTGCATGGAGAGGGAAACATGAGCATGCAGCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461055.2
ENST00000468612.5
ENST00000504387.5
ENST00000504634.5
ENST00000508800.1
CDS TCA 72 bp GCCCTTCATAATGTTGGTGGGCCTCATCCAATCAGTTaGAGGCCTGTAGGAGTGATTTGCCAAGGCGGCAGG +
Preference number: 6 (lower is better)
Translates to: ALHNVGGPHPIS*RPVGVICQGGR
Trigger: CCTGCCGCCTTGGCAAATCACTCCTACAGGCCTTCAACTGATTGGATGAGGCCCACCAACATTATGAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468612.5
ENST00000508546.5
CDS CCA 72 bp CATTATTCATTCTCTCCAAGTGTAGGATGGAACCGCTaGTGGATCATCTTGCCTCCCCGACGCTCTGGCCCT +
Preference number: 6 (lower is better)
Translates to: HYSFSPSVGWNR*WIILPPRRSGP
Trigger: AGGGCCAGAGCGTCGGGGAGGCAAGATGATCCACCAGCGGTTCCATCCTACACTTGGAGAGAATGAATAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397378.7
ENST00000461055.2
CDS CAA 72 bp CATGCTCATGTTTCCCTCTCCATGCAGCGAGCGGACTaGCTTCTAGAGGCAGCTGTAAGCATTTCCCTACTG +
Preference number: 6 (lower is better)
Translates to: HAHVSLSMQRAD*LLEAAVSISLL
Trigger: CAGTAGGGAAATGCTTACAGCTGCCTCTAGAAGCAAGTCCGCTCGCTGCATGGAGAGGGAAACATGAGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000448183.6
ENST00000461055.2
ENST00000468612.5
ENST00000504387.5
ENST00000504634.5
ENST00000508546.5
ENST00000508800.1
ENST00000514660.1
CDS CAA 90 bp ATGTCTCCCTTGCGAAAGGCCAGTTCCTCGGCACACTCTGGGACATaGTCATATAAGGCCCTTGCCATAAGATTCTTGGAACGTTTGCCC +
Preference number: 6 (lower is better)
Translates to: MSPLRKASSSAHSGT*SYKALAIRFLERLP
Trigger: GGGCAAACGTTCCAAGAATCTTATGGCAAGGGCCTTATATGACAATGTCCCAGAGTGTGCCGAGGAACTGGCCTTTCGCAAGGGAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS TCA 72 bp CGGTCACGGTCATGGTTTTCTCTCTCCTCTCTAAGGTaGGCGGGACTCACATCAGGATCTCAGTTTTGGTTG +
Preference number: 6 (lower is better)
Translates to: RSRSWFSLSSLR*AGLTSGSQFWL
Trigger: CAACCAAAACTGAGATCCTGATGTGAGTCCCGCTCACCTTAGAGAGGAGAGAGAAAACCATGACCGTGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512665.5
CDS CAA 90 bp CCTCACGGGGGTTATCACCTTATACTTCATTTCGGCAGCGGTGGGTaGAGCCGTTTTCCTACACTAGTTAAGACAGCATTAAGCACTGCG +
Preference number: 6 (lower is better)
Translates to: PHGGYHLILHFGSGG*SRFPTLVKTALSTA
Trigger: CGCAGTGCTTAATGCTGTCTTAACTAGTGTAGGAAAACGGCTCAACCCACCGCTGCCGAAATGAAGTATAAGGTGATAACCCCCGTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620854.4
CDS TCA 72 bp GAAATTGACAACCTCCCCTGTGCAGAAGTTATGTCCTaGGGCATCTTCCTCGGTCACGGTCATGGTTTTCTC +
Preference number: 6 (lower is better)
Translates to: EIDNLPCAEVMS*GIFLGHGHGFL
Trigger: GAGAAAACCATGACCGTGACCGAGGAAGATGCCTCAGGACATAACTTCTGCACAGGGGAGGTTGTCAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512665.5
CDS TCA 72 bp CAGTACTCACCCTTGTCCACATTTTGCCCCAAGGAATaGTGCAGCTCTGGATGTTGGAAAGGACAATTCCGG +
Preference number: 6 (lower is better)
Translates to: QYSPLSTFCPKE*CSSGCWKGQFR
Trigger: CCGGAATTGTCCTTTCCAACATCCAGAGCTGCATCATTCCTTGGGGCAAAATGTGGACAAGGGTGAGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514660.1
CDS CAA 72 bp TTGCGAAAGGCCAGTTCCTCGGCACACTCTGGGACATaGTCATATAAGGCCCTTGCCATAAGATTCCTTGTC +
Preference number: 6 (lower is better)
Translates to: LRKASSSAHSGT*SYKALAIRFLV
Trigger: GACAAGGAATCTTATGGCAAGGGCCTTATATGACAATGTCCCAGAGTGTGCCGAGGAACTGGCCTTTCGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397378.7
ENST00000504387.5
CDS CAA 72 bp CTGGCTCCAGGTCAACTCTACTACCTTGTCCACATTTaGCCCCAAGGAATGATGCAGCTCTGGATGTTGGAA +
Preference number: 6 (lower is better)
Translates to: LAPGQLYYLVHI*PQGMMQLWMLE
Trigger: TTCCAACATCCAGAGCTGCATCATTCCTTGGGGCAAAATGTGGACAAGGTAGTAGAGTTGACCTGGAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459670.2
CDS CAA 72 bp TTGCGAAAGGCCAGTTCCTCGGCACACTCTGGGACATaGTCATATAAGGCCCTTGCCATAAGATTCTGTAGG +
Preference number: 6 (lower is better)
Translates to: LRKASSSAHSGT*SYKALAIRFCR
Trigger: CCTACAGAATCTTATGGCAAGGGCCTTATATGACAATGTCCCAGAGTGTGCCGAGGAACTGGCCTTTCGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513989.5
CDS CAA 72 bp TCTAAGGTGAGCGGGACTCACATCAGGATCTCAGTTTaGGTTGTGAGAAAGCTGAGGCCCACTCATTACCTG +
Preference number: 6 (lower is better)
Translates to: SKVSGTHIRISV*VVRKLRPTHYL
Trigger: CAGGTAATGAGTGGGCCTCAGCTTTCTCACAACCAAAACTGAGATCCTGATGTGAGTCCCGCTCACCTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512665.5
CDS CAA 90 bp ATGTCTCCCTTGCGAAAGGCCAGTTCCTCGGCACACTCTGGGACATaGTCATATAAGGCCCTTGCCATAAGATTCCTTGTCCACATTTTG +
Preference number: 6 (lower is better)
Translates to: MSPLRKASSSAHSGT*SYKALAIRFLVHIL
Trigger: CAAAATGTGGACAAGGAATCTTATGGCAAGGGCCTTATATGACAATGTCCCAGAGTGTGCCGAGGAACTGGCCTTTCGCAAGGGAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397378.7
ENST00000504387.5
CDS CAA 90 bp GTCAGGTCACTGGCTCCAGGTCAACTCTACTACCTTGTCCACATTTaGCCCCAAGGAATGATGCAGCTCTGGATGTTGGAAAGGACAATT +
Preference number: 6 (lower is better)
Translates to: VRSLAPGQLYYLVHI*PQGMMQLWMLERTI
Trigger: AATTGTCCTTTCCAACATCCAGAGCTGCATCATTCCTTGGGGCAAAATGTGGACAAGGTAGTAGAGTTGACCTGGAGCCAGTGACCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459670.2
CDS CAA 90 bp CTTGAGGTTTTATCTCTCCCACTGGAACTGAAAACACAGGGCCTTTaGCTGATGAGGGAGGGATGTCGTATACCTGAAGAGAAACCCGTG +
Preference number: 6 (lower is better)
Translates to: LEVLSLPLELKTQGL*LMREGCRIPEEKPV
Trigger: CACGGGTTTCTCTTCAGGTATACGACATCCCTCCCTCATCAGCAAAAGGCCCTGTGTTTTCAGTTCCAGTGGGAGAGATAAAACCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505589.1
CDS CAA 90 bp ATGTCTCCCTTGCGAAAGGCCAGTTCCTCGGCACACTCTGGGACATaGTCATATAAGGCCCTTGCCATAAGATTCTGTAGGAGTGATTTG +
Preference number: 6 (lower is better)
Translates to: MSPLRKASSSAHSGT*SYKALAIRFCRSDL
Trigger: CAAATCACTCCTACAGAATCTTATGGCAAGGGCCTTATATGACAATGTCCCAGAGTGTGCCGAGGAACTGGCCTTTCGCAAGGGAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513989.5
CDS TCA 72 bp AGAATCAGAGCCTTGTCCACATTTTGCCCCAAGGAATaGTGCAGCTCTGGATGTTGGAAAGGACAATTCCGG +
Preference number: 6 (lower is better)
Translates to: RIRALSTFCPKE*CSSGCWKGQFR
Trigger: CCGGAATTGTCCTTTCCAACATCCAGAGCTGCATCATTCCTTGGGGCAAAATGTGGACAAGGCTCTGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000468612.5
ENST00000508546.5
ENST00000512665.5
ENST00000513989.5
CDS CCA 72 bp CATAAGATTCTTGGAACGTTTGCCCAGAAAGGAGATTaGGCTGTTCTTGGCTTGATACGGTGCCCAGAGCTT +
Preference number: 6 (lower is better)
Translates to: HKILGTFAQKGD*AVLGLIRCPEL
Trigger: AAGCTCTGGGCACCGTATCAAGCCAAGAACAGCCCAATCTCCTTTCTGGGCAAACGTTCCAAGAATCTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS CCA 72 bp TCACTAGGCTCTTTTCTAGTGACCCACGAAAGCTTCTaGCCTCAGACACAGTGTTCAACCACTTCAGGGATT +
Preference number: 6 (lower is better)
Translates to: SLGSFLVTHESF*PQTQCSTTSGI
Trigger: AATCCCTGAAGTGGTTGAACACTGTGTCTGAGGCCAGAAGCTTTCGTGGGTCACTAGAAAAGAGCCTAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000468612.5
ENST00000508546.5
ENST00000512665.5
ENST00000513989.5
CDS CCA 72 bp CTGGTGAATAAACTTCTTACCAATCTTCCCCTGGAATaGTTGAGTCAGCTCTGGTGTGAGTTAGTGGCCCCA +
Preference number: 6 (lower is better)
Translates to: LVNKLLTNLPLE*LSQLWCELVAP
Trigger: TGGGGCCACTAACTCACACCAGAGCTGACTCAACCATTCCAGGGGAAGATTGGTAAGAAGTTTATTCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461055.2
CDS CAA 72 bp TTGCGAAAGGCCAGTTCCTCGGCACACTCTGGGACATaGTCATATAAGGCCCTTGCCATAAGATTCTTGGAA +
Preference number: 6 (lower is better)
Translates to: LRKASSSAHSGT*SYKALAIRFLE
Trigger: TTCCAAGAATCTTATGGCAAGGGCCTTATATGACAATGTCCCAGAGTGTGCCGAGGAACTGGCCTTTCGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448183.6
CDS CAA 72 bp GTGAATAAACTTCTTACCAATCTTCCCCTGGAATGGTaGAGTCAGCTCTGGTGTGAGTTAGTGGCCCCAGAG +
Preference number: 6 (lower is better)
Translates to: VNKLLTNLPLEW*SQLWCELVAPE
Trigger: CTCTGGGGCCACTAACTCACACCAGAGCTGACTCAACCATTCCAGGGGAAGATTGGTAAGAAGTTTATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461055.2
CDS CAA 72 bp TTATCTCTCCCACTGGAACTGAAAACACAGGGCCTTTaGCTGATGAGGGAGGGATGTCGTATACCTGAAGAG +
Preference number: 6 (lower is better)
Translates to: LSLPLELKTQGL*LMREGCRIPEE
Trigger: CTCTTCAGGTATACGACATCCCTCCCTCATCAGCAAAAGGCCCTGTGTTTTCAGTTCCAGTGGGAGAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505589.1
CDS CAA 90 bp GGCCCTTGCCATAAGATTCTTATACTTCATTTCGGCAGCGGTGGGTaGAGCCGTTTTCCTACACTAGTTAAGACAGCATTAAGCACTGCG +
Preference number: 6 (lower is better)
Translates to: GPCHKILILHFGSGG*SRFPTLVKTALSTA
Trigger: CGCAGTGCTTAATGCTGTCTTAACTAGTGTAGGAAAACGGCTCAACCCACCGCTGCCGAAATGAAGTATAAGAATCTTATGGCAAGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379433.5
ENST00000379446.10
CDS CAA 90 bp ATGTCTCCCTTGCGAAAGGCCAGTTCCTCGGCACACTCTGGGACATaGTCATATAAGGCCCTTGCCATAAGATTCTTATACTTCATTTCG +
Preference number: 6 (lower is better)
Translates to: MSPLRKASSSAHSGT*SYKALAIRFLYFIS
Trigger: CGAAATGAAGTATAAGAATCTTATGGCAAGGGCCTTATATGACAATGTCCCAGAGTGTGCCGAGGAACTGGCCTTTCGCAAGGGAGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379433.5
ENST00000379446.10
CDS TCA 72 bp AACTCTACTACCTTGTCCACATTTTGCCCCAAGGAATaGTGCAGCTCTGGATGTTGGAAAGGACAATTCCGG +
Preference number: 6 (lower is better)
Translates to: NSTTLSTFCPKE*CSSGCWKGQFR
Trigger: CCGGAATTGTCCTTTCCAACATCCAGAGCTGCATCATTCCTTGGGGCAAAATGTGGACAAGGTAGTAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459670.2
CDS TCA 72 bp TGCAGTCTTGACATGGCGACATCAACTACATGTGGCTaGATCTGCAGCTTCATTCATTGGGGAAGTGGTATG +
Preference number: 6 (lower is better)
Translates to: CSLDMATSTTCG*ICSFIHWGSGM
Trigger: CATACCACTTCCCCAATGAATGAAGCTGCAGATTCAGCCACATGTAGTTGATGTCGCCATGTCAAGACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504634.5
CDS TCA 72 bp CTTGTCCTCATGGGCAGTGTAGATGTTTACAGACACTaGGCCCACTTGATCTGCTGTTTCATGATCCAACTC +
Preference number: 6 (lower is better)
Translates to: LVLMGSVDVYRH*AHLICCFMIQL
Trigger: GAGTTGGATCATGAAACAGCAGATCAAGTGGGCTCAGTGTCTGTAAACATCTACACTGCCCATGAGGACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508800.1
CDS GCA 72 bp CCACCAGCAACATGGCATCATGGTAAGGAATGGTCCTaGCAGTCAGAAAGACCAGAGTTTAAATTTTGGCTG +
Preference number: 6 (lower is better)
Translates to: PPATWHHGKEWS*QSERPEFKFWL
Trigger: CAGCCAAAATTTAAACTCTGGTCTTTCTGACTGGCAGGACCATTCCTTACCATGATGCCATGTTGCTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508800.1
CDS CAA 72 bp TTGCGAAAGGCCAGTTCCTCGGCACACTCTGGGACATaGTCATATAAGGCCCTTGCCATAAGATTCTTATAC +
Preference number: 6 (lower is better)
Translates to: LRKASSSAHSGT*SYKALAIRFLY
Trigger: GTATAAGAATCTTATGGCAAGGGCCTTATATGACAATGTCCCAGAGTGTGCCGAGGAACTGGCCTTTCGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379433.5
ENST00000379446.10
CDS CAA 90 bp CATGGCGACATCAACTACATGTGGCTGAATCTGCAGCTTCATTCATaGGGGAAGTGGTATGTCATCCATTCCAAGGTTTTGACTTCCTCT +
Preference number: 6 (lower is better)
Translates to: HGDINYMWLNLQLHS*GKWYVIHSKVLTSS
Trigger: AGAGGAAGTCAAAACCTTGGAATGGATGACATACCACTTCCCCAATGAATGAAGCTGCAGATTCAGCCACATGTAGTTGATGTCGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504634.5
CDS CCA 72 bp TATGTCAACGTGACTGGGCTGCAATGCCCACGTATTTaGTCAGACATTATTTTGGATGTTTCTGCGAGGGTT +
Preference number: 6 (lower is better)
Translates to: YVNVTGLQCPRI*SDIILDVSARV
Trigger: AACCCTCGCAGAAACATCCAAAATAATGTCTGACCAAATACGTGGGCATTGCAGCCCAGTCACGTTGACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468612.5
CDS CAA 72 bp TATAAGGCCCTTGCCATAAGATTCCTTGTCCACATTTaGCCCCAAGGAATGATGCAGCTCTGGATGTTGGAA +
Preference number: 6 (lower is better)
Translates to: YKALAIRFLVHI*PQGMMQLWMLE
Trigger: TTCCAACATCCAGAGCTGCATCATTCCTTGGGGCAAAATGTGGACAAGGAATCTTATGGCAAGGGCCTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397378.7
ENST00000504387.5
CDS CAA 72 bp ATATGTCAACGTGACTGGGCTGCAATGCCCACGTATTaGGTCAGACATTATTTTGGATGTTTCTGCGAGGGT +
Preference number: 6 (lower is better)
Translates to: ICQRDWAAMPTY*VRHYFGCFCEG
Trigger: ACCCTCGCAGAAACATCCAAAATAATGTCTGACCAAATACGTGGGCATTGCAGCCCAGTCACGTTGACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468612.5
CDS CCA 72 bp AAACACAGAAACAGAGATTCAAAAGGGTCAGGTCACTaGCTCCAGGTCAACTCTACTACCTTGTCCACATTT +
Preference number: 6 (lower is better)
Translates to: KHRNRDSKGSGH*LQVNSTTLSTF
Trigger: AAATGTGGACAAGGTAGTAGAGTTGACCTGGAGCCAGTGACCTGACCCTTTTGAATCTCTGTTTCTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459670.2
CDS CCA 72 bp ATGTGGCTGAATCTGCAGCTTCATTCATTGGGGAAGTaGTATGTCATCCATTCCAAGGTTTTGACTTCCTCT +
Preference number: 6 (lower is better)
Translates to: MWLNLQLHSLGK*YVIHSKVLTSS
Trigger: AGAGGAAGTCAAAACCTTGGAATGGATGACATACCACTTCCCCAATGAATGAAGCTGCAGATTCAGCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504634.5
CDS CAA 72 bp GGTTATCACCTTATACTTCATTTCGGCAGCGGTGGGTaGAGCCGTTTTCCTACACTAGTTAAGACAGCATTA +
Preference number: 6 (lower is better)
Translates to: GYHLILHFGSGG*SRFPTLVKTAL
Trigger: TAATGCTGTCTTAACTAGTGTAGGAAAACGGCTCAACCCACCGCTGCCGAAATGAAGTATAAGGTGATAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620854.4
CDS GCA 72 bp AAGTTTACCCCATACTTCTGTGTTTGGAAGGAAAAATaGAGTCTTGACATGGCGACATCAACTACATGTGGC +
Preference number: 6 (lower is better)
Translates to: KFTPYFCVWKEK*SLDMATSTTCG
Trigger: GCCACATGTAGTTGATGTCGCCATGTCAAGACTGCATTTTTCCTTCCAAACACAGAAGTATGGGGTAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504634.5
CDS CAA 72 bp ATCAACTACATGTGGCTGAATCTGCAGCTTCATTCATaGGGGAAGTGGTATGTCATCCATTCCAAGGTTTTG +
Preference number: 6 (lower is better)
Translates to: INYMWLNLQLHS*GKWYVIHSKVL
Trigger: CAAAACCTTGGAATGGATGACATACCACTTCCCCAATGAATGAAGCTGCAGATTCAGCCACATGTAGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504634.5
CDS TCA 72 bp ACTCTACTTGAAGAACATATGATGTTTGCCAGTGTCTaGCATTACGGACCTCACAGCTTACTGAATCTGCAA +
Preference number: 6 (lower is better)
Translates to: TLLEEHMMFASV*HYGPHSLLNLQ
Trigger: TTGCAGATTCAGTAAGCTGTGAGGTCCGTAATGTCAGACACTGGCAAACATCATATGTTCTTCAAGTAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397378.7
CDS TCA 72 bp ACTCTACTTGAAGAACATATGATGTTTGCCAGTGTCTaGCATTACGGACCTCACAGCTTACTGAATCCAAGT +
Preference number: 6 (lower is better)
Translates to: TLLEEHMMFASV*HYGPHSLLNPS
Trigger: ACTTGGATTCAGTAAGCTGTGAGGTCCGTAATGTCAGACACTGGCAAACATCATATGTTCTTCAAGTAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000448183.6
ENST00000459670.2
ENST00000468612.5
ENST00000504387.5
ENST00000504634.5
ENST00000508546.5
ENST00000512665.5
ENST00000513989.5
ENST00000514660.1
CDS TCA 72 bp ACCCTTTGTCTCTACTTTGCCTTCCGTGCTAAGTGTTaGCTTCTGCTGAGTTTGATTTCATTCATTTCAGCT +
Preference number: 6 (lower is better)
Translates to: TLCLYFAFRAKC*LLLSLISFISA
Trigger: AGCTGAAATGAATGAAATCAAACTCAGCAGAAGTCAACACTTAGCACGGAAGGCAAAGTAGAGACAAAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461055.2
CDS GCA 72 bp TGGGTAATTTCATATGTCAACGTGACTGGGCTGCAATaGCCACGTATTTGGTCAGACATTATTTTGGATGTT +
Preference number: 6 (lower is better)
Translates to: WVISYVNVTGLQ*PRIWSDIILDV
Trigger: AACATCCAAAATAATGTCTGACCAAATACGTGGGCATTGCAGCCCAGTCACGTTGACATATGAAATTACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468612.5
CDS CAA 72 bp CATAAGATTCTTATACTTCATTTCGGCAGCGGTGGGTaGAGCCGTTTTCCTACACTAGTTAAGACAGCATTA +
Preference number: 6 (lower is better)
Translates to: HKILILHFGSGG*SRFPTLVKTAL
Trigger: TAATGCTGTCTTAACTAGTGTAGGAAAACGGCTCAACCCACCGCTGCCGAAATGAAGTATAAGAATCTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379433.5
ENST00000379446.10
CDS TCA 72 bp CCAAACTCAGGACACTTTATTAAAATGCTCATCAGATaGGATCTTTTCAGTGGAGGTTCACAAGCTGGTTTG +
Preference number: 6 (lower is better)
Translates to: PNSGHFIKMLIR*DLFSGGSQAGL
Trigger: CAAACCAGCTTGTGAACCTCCACTGAAAAGATCTCATCTGATGAGCATTTTAATAAAGTGTCCTGAGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379433.5
CDS CAA 72 bp GTCAGACATTATTTTGGATGTTTCTGCGAGGGTTTTTaGGGAGGAGACTTACATTTAAACCAATGGACTTTG +
Preference number: 6 (lower is better)
Translates to: VRHYFGCFCEGF*GGDLHLNQWTL
Trigger: CAAAGTCCATTGGTTTAAATGTAAGTCTCCTCCCAAAAAACCCTCGCAGAAACATCCAAAATAATGTCTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468612.5
CDS CAA 90 bp ACGTATTTGGTCAGACATTATTTTGGATGTTTCTGCGAGGGTTTTTaGGGAGGAGACTTACATTTAAACCAATGGACTTTGAGTAAAGCA +
Preference number: 6 (lower is better)
Translates to: TYLVRHYFGCFCEGF*GGDLHLNQWTLSKA
Trigger: TGCTTTACTCAAAGTCCATTGGTTTAAATGTAAGTCTCCTCCCAAAAAACCCTCGCAGAAACATCCAAAATAATGTCTGACCAAATACGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468612.5
CDS TCA 72 bp AGTTTGATTTCATTCATTTCAGCTAGACATGTCTGGTaGATAAACTTCTTACCAATCTTCCCCTGGAATGGT +
Preference number: 6 (lower is better)
Translates to: SLISFISARHVW*INFLPIFPWNG
Trigger: ACCATTCCAGGGGAAGATTGGTAAGAAGTTTATTCACCAGACATGTCTAGCTGAAATGAATGAAATCAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461055.2
CDS CCA 72 bp ACCTTTGTCTCTTGTCCTCTACTAATGAGATACCTATaGTGGAGACATTTCAGAGAGCTTAATATTAAACAG +
Preference number: 6 (lower is better)
Translates to: TFVSCPLLMRYL*WRHFRELNIKQ
Trigger: CTGTTTAATATTAAGCTCTCTGAAATGTCTCCACCATAGGTATCTCATTAGTAGAGGACAAGAGACAAAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512665.5
CDS TCA 72 bp TCTTCTGACCAGTTTCTTCGTTTTCATAACTCTACTTaGAGAACATATGATGTTTGCCAGTGTCTGACATTA +
Preference number: 6 (lower is better)
Translates to: SSDQFLRFHNST*RTYDVCQCLTL
Trigger: TAATGTCAGACACTGGCAAACATCATATGTTCTTCAAGTAGAGTTATGAAAACGAAGAAACTGGTCAGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000397378.7
ENST00000448183.6
ENST00000459670.2
ENST00000468612.5
ENST00000504387.5
ENST00000504634.5
ENST00000508546.5
ENST00000512665.5
ENST00000513989.5
ENST00000514660.1