RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NECAB3 (Homo sapiens)

Ensembl gene IDs: ENSG00000125967

Ensembl transcript IDs: ENST00000246190.11, ENST00000375238.8, ENST00000439478.5, ENST00000463246.5, ENST00000473892.1, ENST00000477778.5, ENST00000478237.5, ENST00000480994.5, ENST00000483813.5, ENST00000484824.2, ENST00000485399.5, ENST00000485976.5, ENST00000488489.5, ENST00000493590.1, ENST00000494174.5, ENST00000498353.5, ENST00000606106.1, ENST00000606525.5, ENST00000606690.5, ENST00000606699.5, ENST00000607055.1, ENST00000607805.5

Found 705 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCTGCTCTaGGCCTCCACGCTCTCTGCATCTGACCGCCAGCCATGGGCCTGG +
Preference number: 1 (lower is better)
Translates to: LRARRPARRLPQSLL*ASTLSASDRQPWAW
Trigger: CCAGGCCCATGGCTGGCGGTCAGATGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493590.1
3UTR GCA 90 bp CACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCTaGTCTGCGCCTCCACGCTCTCTGCATCTGACCGCCAGCCATGGG +
Preference number: 1 (lower is better)
Translates to: HSSGLGVLPAGCRRA*SAPPRSLHLTASHG
Trigger: CCCATGGCTGGCGGTCAGATGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493590.1
3UTR TCA 90 bp TGCGCCCTGTGTCAGAAGAGCCGGGGGACCAGGTGGATGACCGGCTaGCACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGA +
Preference number: 1 (lower is better)
Translates to: CALCQKSRGTRWMTG*HSSGLGVLPAGCRR
Trigger: TCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCCGGCTCTTCTGACACAGGGCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR TCA 90 bp CCGGCTGCCGCAGAGCCTGCTCTGCGCCTCCACGCTCTCTGCATCTaGCCTAGAGGAAGTGAGGCTCACAGGGCCGAGGACTGGGGCCCC +
Preference number: 1 (lower is better)
Translates to: PAAAEPALRLHALCI*PRGSEAHRAEDWGP
Trigger: GGGGCCCCAGTCCTCGGCCCTGTGAGCCTCACTTCCTCTAGGTCAGATGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGGCAGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR GCA 90 bp CTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCTGCTCTaGGCCTCCACGCTCTCTGCATCTGACCTAGAGGAAGTGAGGCTC +
Preference number: 1 (lower is better)
Translates to: LRARRPARRLPQSLL*ASTLSASDLEEVRL
Trigger: GAGCCTCACTTCCTCTAGGTCAGATGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR CCA 90 bp GGGGCACCCAGCTCAGGCCCAGCCTCGGAGGCAAGGTTTGAGGGTTaGGGGGTCCCTGAGCATCAGCCCTGCTTCTGCCGCTGGCTGAGG +
Preference number: 1 (lower is better)
Translates to: GAPSSGPASEARFEG*GVPEHQPCFCRWLR
Trigger: CCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGGGACCCCCCAACCCTCAAACCTTGCCTCCGAGGCTGGGCCTGAGCTGGGTGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR CCA 90 bp GCACTAGCCCCACAGGTTGACAGCACCCTTACATACCGCCAGCCATaGGCCTGGGCCTCCAGGGTATCTGACGCCCCCTCCAGCGAGCTC +
Preference number: 1 (lower is better)
Translates to: ALAPQVDSTLTYRQP*AWASRVSDAPSSEL
Trigger: GAGCTCGCTGGAGGGGGCGTCAGATACCCTGGAGGCCCAGGCCCATGGCTGGCGGTATGTAAGGGTGCTGTCAACCTGTGGGGCTAGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR GCA 90 bp GGCCCTCTCGTACTCCAGCTTGGTGGCATCCATGGCAGCGAGCACTaGACGGTTCAGCGATTCCAATGCAGCCAGCACCGGCCGGTAGAC +
Preference number: 1 (lower is better)
Translates to: GPLVLQLGGIHGSEH*TVQRFQCSQHRPVD
Trigger: GTCTACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGAGTACGAGAGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
3UTR CCA 90 bp CTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTaGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGAGGGAG +
Preference number: 1 (lower is better)
Translates to: LRALPPGPSPGGDKS*SLRWAGQSRRLQRE
Trigger: CTCCCTCTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
3UTR TCA 90 bp GCATCTTCTGGGCGGACACATGCAGACAATGGCTCTGGGCCCCTGTaGAGTCCACATAGCAGCGCAGGGCTCGGTGGAAGTCCTGCAGGC +
Preference number: 1 (lower is better)
Translates to: ASSGRTHADNGSGPL*SPHSSAGLGGSPAG
Trigger: GCCTGCAGGACTTCCACCGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAAGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
3UTR CCA 90 bp TGCAGCTGGCTCACCGTCTCCCGCAGCAGGAAGCGCGTCACAAACTaGTCCACTTTGGAGGCCCTCTCGTACTCCAGCTTGGTGGCATCC +
Preference number: 1 (lower is better)
Translates to: CSWLTVSRSRKRVTN*STLEALSYSSLVAS
Trigger: GGATGCCACCAAGCTGGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTGTGACGCGCTTCCTGCTGCGGGAGACGGTGAGCCAGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
3UTR TCA 90 bp TTGGAATGGGGGTACAATGGGCGCTTGTGCACTAGCCCCACAGGTTaGCAGCACCCTTACATACCGCCAGCCATGGGCCTGGGCCTCCAG +
Preference number: 1 (lower is better)
Translates to: LEWGYNGRLCTSPTG*QHPYIPPAMGLGLQ
Trigger: CTGGAGGCCCAGGCCCATGGCTGGCGGTATGTAAGGGTGCTGTCAACCTGTGGGGCTAGTGCACAAGCGCCCATTGTACCCCCATTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR TCA 90 bp GGTGCCTTCTCCAGGAGGCCTCATCCTGCCAGAACTCATACAGGGTaGAGGAGGCACCGTCCAGCATCTTCTGGGCGGACACATGCAGAC +
Preference number: 1 (lower is better)
Translates to: GAFSRRPHPARTHTG*RRHRPASSGRTHAD
Trigger: GTCTGCATGTGTCCGCCCAGAAGATGCTGGACGGTGCCTCCTTCACCCTGTATGAGTTCTGGCAGGATGAGGCCTCCTGGAGAAGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR TCA 90 bp TGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATaGCATGCAAACCAACCCAGAGGCCTCTGGCACATCCATGGGTGC +
Preference number: 1 (lower is better)
Translates to: CPENGWDEGMQTICK*HANQPRGLWHIHGC
Trigger: GCACCCATGGATGTGCCAGAGGCCTCTGGGTTGGTTTGCATGTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR GCA 90 bp CTTGGGGCTTCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATaGAAACGATATGCAAATGACATGCAAACCAACCCAGAGGCCTCT +
Preference number: 1 (lower is better)
Translates to: LGASHTALRMGGMRA*KRYANDMQTNPEAS
Trigger: AGAGGCCTCTGGGTTGGTTTGCATGTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGAAGCCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR GCA 90 bp GTGTCCGGGGCCCGCAGGTGGTCGATGAGGATGCGCTGGAAGGCCTTGCTGCCAGTCCTGCCCGCCGGCTaGCGCAGAGCCTGCTCTGCG +
Preference number: 2 (lower is better)
Translates to: VSGARRWSMRMRWKALLPVLPAG*RRACSA
Trigger: CGCAGAGCAGGCTCTGCGGCAGCCGGCGGGCAGGAC...TGGCAGCAAGGCCTTCCAGCGCATCCTCATCGACCACCTGCGGGCCCCGGACAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR CCA 90 bp AGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAGCCAGTCCCTGATCCCTaGGCTGAGAGCCCTTCCACC +
Preference number: 2 (lower is better)
Translates to: SLVAWEGDGAPSSGPASEPVPDP*AESPST
Trigger: GGTGGAAGGGCTCTCAGCCCAGGGATCAGGGACTGG...CTCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CCA 90 bp GAGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGACCCTGCTTCTGCCGCTaGCTGAGGAGGAGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: EPSGLGGRRGTQLRPSLGPCFCR*LRRSRS
Trigger: GCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGG...TCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR GCA 90 bp CGGGGCCCGCAGGTGGTCGATGAGGATGCGCTGGAAGGCCTTGCTGCCAGGCGACCGCAGAGCCTGCTCTaGGCCTCCACGCTCTCTGCA +
Preference number: 2 (lower is better)
Translates to: RGPQVVDEDALEGLAARRPQSLL*ASTLSA
Trigger: TGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGG...TCGCCTGGCAGCAAGGCCTTCCAGCGCATCCTCATCGACCACCTGCGGGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR CCA 90 bp GAGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAGTCTTTGCGCTGGGCTaGCCAGTCCAGAAGGCTCCA +
Preference number: 2 (lower is better)
Translates to: EPSGLGGRRGTQLRPSLGVFALG*PVQKAP
Trigger: TGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGAC...TCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CCA 90 bp GAGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGATCCTGGTCTTTGCGCTaGGCTGGCCAGTCCAGAAGG +
Preference number: 2 (lower is better)
Translates to: EPSGLGGRRGTQLRPSLGSWSLR*AGQSRR
Trigger: CCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGA...TCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CCA 90 bp GTGGATGACCGGCTGACACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGGCCTTGCACTCGAGCTaGTCGATGAGCTCCTGGAGG +
Preference number: 2 (lower is better)
Translates to: VDDRLTLLRARRPARRLPALHSS*SMSSWR
Trigger: CCTCCAGGAGCTCATCGACCAGCTCGAGTGCAAGGC...CGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAGCCGGTCATCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR TCA 90 bp CGGCTGACACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCTGAGAATCCAGGTCTCCTaGGCCAGGCAGAAGCCAAAG +
Preference number: 2 (lower is better)
Translates to: RLTLLRARRPARRLPQSLRIQVS*ARQKPK
Trigger: CTTTGGCTTCTGCCTGGCTCAGGAGACCTGGATTCT...CAGGCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR TCA 90 bp GGTGAGGGTGTCCGGGGCCCGCAGGTGGTCGATGAGGATGCGCTGGAAGGCCTTAGGTGGATGACCGGCTaGCACTCCTCAGGGCTCGGC +
Preference number: 2 (lower is better)
Translates to: GEGVRGPQVVDEDALEGLRWMTG*HSSGLG
Trigger: GCCGAGCCCTGAGGAGTGTCAGCCGGTCATCCACCT...AAGGCCTTCCAGCGCATCCTCATCGACCACCTGCGGGCCCCGGACACCCTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR TCA 90 bp GTGTCAGAAGAGCCGGGGGACCAGGTGGATGACCGGCTGACACTCCTCAGGGCTGGCCTCCAGGGTATCTaGCGCCCCCTCCAGCGAGCT +
Preference number: 2 (lower is better)
Translates to: VSEEPGDQVDDRLTLLRAGLQGI*RPLQRA
Trigger: AGCTCGCTGGAGGGGGCGTCAGATACCCTGGAGGCC...AGCCCTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCCGGCTCTTCTGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
3UTR-3UTR GCA 90 bp TGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTTCCAGCCGGGGGACCTGGAGCCGCCACTaGATCTCGGCCTCTGAGCTG +
Preference number: 2 (lower is better)
Translates to: CKSGPLARSSSRRGSSRGTWSRH*ISASEL
Trigger: CAGCTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGT...CCCCCGGCTGGAACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
3UTR-3UTR GCA 90 bp CGGGGCCCGCAGGTGGTCGATGAGGATGCGCTGGAAGGCCTTGCTGCCAGGCGACCGCTGAACAGTTCCTaGAGCTCCCCCAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: RGPQVVDEDALEGLAARRPLNSS*SSPRLR
Trigger: TCTCAGCCTGGGGGAGCTGCAGGAACTGTTCAGCGG...TCGCCTGGCAGCAAGGCCTTCCAGCGCATCCTCATCGACCACCTGCGGGCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CCA 90 bp GTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTTCCAGCCGGGGTGGAGGCGGTTCACCTaGAGCCGCCACTGCATCTCG +
Preference number: 2 (lower is better)
Translates to: VQVRPLGQVLFTQGFQPGWRRFT*SRHCIS
Trigger: CGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCA...CCCCGGCTGGAACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
3UTR-3UTR GCA 90 bp GAGCCGGGGGACCAGGTGGATGACCGGCTGACACTCCTCAGGGCTCGGCGTCCTGTTCAGCGATTCCAATaGAGCCAGCACCGGCCGGTA +
Preference number: 2 (lower is better)
Translates to: EPGDQVDDRLTLLRARRPVQRFQ*SQHRPV
Trigger: TACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAAC...AGGACGCCGAGCCCTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCCGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
3UTR-3UTR CCA 90 bp TGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTTCCAGCCGGGGGTCCTGGTCTTTGCGCTaGGCTGGCCAGTCCAGAAGG +
Preference number: 2 (lower is better)
Translates to: CKSGPLARSSSRRGSSRGSWSLR*AGQSRR
Trigger: CCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGA...CCCCCGGCTGGAACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR CCA 90 bp CCGCAGAGCCTGCTCTGCGCCTCCACGCTCTCTGCATCTGACCGCCAGCCATGGGCTTGGTGGCATCCATaGCAGCGAGCACTGCACGGT +
Preference number: 2 (lower is better)
Translates to: PQSLLCASTLSASDRQPWAWWHP*QRALHG
Trigger: ACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGC...CCATGGCTGGCGGTCAGATGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493590.1
3UTR-3UTR CCA 90 bp CGGCCTCTGAGCTGCGCCCTGTGTCAGAAGAGCCGGGGGACCAGGTGGATGACCTCGATGAGGATGCGCTaGAAGGCCTTGCTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: RPLSCALCQKSRGTRWMTSMRMR*KALLPG
Trigger: GCCTGGCAGCAAGGCCTTCCAGCGCATCCTCATCGA...GGTCATCCACCTGGTCCCCCGGCTCTTCTGACACAGGGCGCAGCTCAGAGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR CCA 90 bp AGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAGTGTGGGGATTTGGAATaGGGGTACAATGGGCGCTTG +
Preference number: 2 (lower is better)
Translates to: SLVAWEGDGAPSSGPASECGDLE*GYNGRL
Trigger: CAAGCGCCCATTGTACCCCCATTCCAAATCCCCACA...CTCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR TCA 90 bp TGGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCGCTTCTGCCGCTGGCTaGGGAGGAGCAGAAGCCTGG +
Preference number: 2 (lower is better)
Translates to: WAESPSTRPKSRRRQVLVASAAG*GGAEAW
Trigger: CCAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGC...GACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR GCA 90 bp GGCCCCTGTGAAGTCCACATAGCAGCGCAGGGCTCGGTGGAAGTCCTGCAGGCCTCTCGGCCTCTGAGCTaGGCCCTGTGTCAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: GPCEVHIAAQGSVEVLQASRPLS*ALCQKS
Trigger: GCTCTTCTGACACAGGGCGCAGCTCAGAGGCCGAGA...GGCCTGCAGGACTTCCACCGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR GCA 90 bp GTGTCAGAAGAGCCGGGGGACCAGGTGGATGACCGGCTGACACTCCTCAGGGCTCTGCAGGCCTTCCTCTaGCACCTGGACCTGCCTCTG +
Preference number: 2 (lower is better)
Translates to: VSEEPGDQVDDRLTLLRALQAFL*HLDLPL
Trigger: CAGAGGCAGGTCCAGGTGGCAGAGGAAGGCCTGCAG...AGCCCTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCCGGCTCTTCTGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR CCA 90 bp GTCCCTGAGCATCAGCCCTGCTTCTGCCGCTGGCTGAGGAGGAGCAGAAGCCTGCCAGTCCCTGATCCCTaGGCTGAGAGCCCTTCCACC +
Preference number: 2 (lower is better)
Translates to: VPEHQPCFCRWLRRSRSLPVPDP*AESPST
Trigger: GGTGGAAGGGCTCTCAGCCCAGGGATCAGGGACTGG...CAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CCA 90 bp AGCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGCTGGGGTCCCAGCCTaGGGTTCAGAGGCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: SLVPRQQEESRTLARRPDAGVPA*GSEASG
Trigger: CCCAGAGGCCTCTGAACCCCAGGCTGGGACCCCAGC...ATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CCA 90 bp GGCCCCTGTGAAGTCCACATAGCAGCGCAGGGCTCGGTGGAAGTCCTGCAGGCCGCAAGTCAGGCCCCTTaGCCAGGTCCTCTTCACGCA +
Preference number: 2 (lower is better)
Translates to: GPCEVHIAAQGSVEVLQAASQAP*PGPLHA
Trigger: TGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGC...GGCCTGCAGGACTTCCACCGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
3UTR-3UTR CCA 90 bp CGGGGCCCGCAGGTGGTCGATGAGGATGCGCTGGAAGGCCTTGCTGCCAGGCGAGACACATGCAGACAATaGCTCTGGGCCCCTGTGAAG +
Preference number: 2 (lower is better)
Translates to: RGPQVVDEDALEGLAARRDTCRQ*LWAPVK
Trigger: CTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTC...TCGCCTGGCAGCAAGGCCTTCCAGCGCATCCTCATCGACCACCTGCGGGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR TCA 90 bp CCGCCCGAAAATGCAGGCTCCAGGATGCTGGGACTGTGGGGATTTGGAATGGGGGGGGGACCAGGTGGATaGCCGGCTGACACTCCTCAG +
Preference number: 2 (lower is better)
Translates to: PPENAGSRMLGLWGFGMGGGPGG*PADTPQ
Trigger: CTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCC...CCCCATTCCAAATCCCCACAGTCCCAGCATCCTGGAGCCTGCATTTTCGGGCGG
63% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR TCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGCATCTCGGCCTCTaGGCTGCGCCCTGTGTCAGA +
Preference number: 2 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGLHLGL*AAPCVR
Trigger: TCTGACACAGGGCGCAGCTCAGAGGCCGAGATGCAG...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR TCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCCTGCCTCTGGGCCATaGGGATGTGCAAGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGPASGP*GCASQA
Trigger: GGCCTGACTTGCACATCCTCATGGCCCAGAGGCAGG...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR TCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCGCAGCTCCCCCAGGCTaGGAACCCCATCGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: QEETSPGLCAGLASPEGSAAPPG*EPHRQS
Trigger: ACTTTGCCGATGGGGTTCTCAGCCTGGGGGAGCTGC...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR GCA 90 bp CGGCCTCTGAGCTGCGCCCTGTGTCAGAAGAGCCGGGGGACCAGGTGGATGACCTGGGGCTTCCCATACTaGCCTGAGAATGGGTGGGAT +
Preference number: 2 (lower is better)
Translates to: RPLSCALCQKSRGTRWMTWGFPY*PENGWD
Trigger: ATCCCACCCATTCTCAGGGCAGTATGGGAAGCCCCA...GGTCATCCACCTGGTCCCCCGGCTCTTCTGACACAGGGCGCAGCTCAGAGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR GCA 90 bp ATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGCCTCTGAGTCTGCCACCTGGACCTaGCTCTGGGCCATGAGGATG +
Preference number: 2 (lower is better)
Translates to: MSSWRRFTWSRHCISASESATWT*LWAMRM
Trigger: CATCCTCATGGCCCAGAGGCAGGTCCAGGTGGCAGA...CTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
3UTR-3UTR GCA 90 bp GAACACAGTGGTGAGGGTGTCCGGGGCCCGCAGGTGGTCGATGAGGATGCGCTGTTCTGGGCGGACACATaGAGACAATGGCTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: EHSGEGVRGPQVVDEDALFWADT*RQWLWA
Trigger: GGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAA...CAGCGCATCCTCATCGACCACCTGCGGGCCCCGGACACCCTCACCACTGTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR GCA 90 bp GGTGAGGGTGTCCGGGGCCCGCAGGTGGTCGATGAGGATGCGCTGGAAGGCCTTCAGGAGGCCTCATCCTaGCAGAACTCATACAGGGTG +
Preference number: 2 (lower is better)
Translates to: GEGVRGPQVVDEDALEGLQEASS*QNSYRV
Trigger: CACCCTGTATGAGTTCTGGCAGGATGAGGCCTCCTG...AAGGCCTTCCAGCGCATCCTCATCGACCACCTGCGGGCCCCGGACACCCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR CCA 90 bp GTCCCTGAGCATCAGCCCTGCTTCTGCCGCTGGCTGAGGAGGAGCAGAAGCCTGGGAGGAGACAAGTCCTaGTCTTTGCGCTGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: VPEHQPCFCRWLRRSRSLGGDKS*SLRWAG
Trigger: GCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCC...CAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CCA 90 bp GGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGCCAGTCCCTGATCCCTaGGCTGAGAGCCCTTCCACC +
Preference number: 2 (lower is better)
Translates to: GGDKSWSLRWAGQSRRLQPVPDP*AESPST
Trigger: GGTGGAAGGGCTCTCAGCCCAGGGATCAGGGACTGG...CTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR CCA 90 bp TTGCACTCGAGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACGCAAGTCAGGCCCCTTaGCCAGGTCCTCTTCACGCA +
Preference number: 2 (lower is better)
Translates to: LHSSWSMSSWRRFTWSRHASQAP*PGPLHA
Trigger: TGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGC...GTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
3UTR-3UTR CCA 90 bp GGCTGGGAAGAACACAGTGGTGAGGGTGTCCGGGGCCCGCAGGTGGTCGATGAGACCTGGACCTGCCTCTaGGCCATGAGGATGTGCAAG +
Preference number: 2 (lower is better)
Translates to: GWEEHSGEGVRGPQVVDETWTCL*AMRMCK
Trigger: CTTGCACATCCTCATGGCCCAGAGGCAGGTCCAGGT...CTCATCGACCACCTGCGGGCCCCGGACACCCTCACCACTGTGTTCTTCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR TCA 90 bp GCCTGCTCTGCGCCTCCACGCTCTCTGCATCTGACCGCCAGCCATGGGCCTGGGGACACCCAGGTGCTCTaGGAAGTAGTCACACAGTTT +
Preference number: 2 (lower is better)
Translates to: ACSAPPRSLHLTASHGPGDTQVL*EVVTQF
Trigger: AAACTGTGTGACTACTTCTCAGAGCACCTGGGTGTC...CCCAGGCCCATGGCTGGCGGTCAGATGCAGAGAGCGTGGAGGCGCAGAGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493590.1
3UTR-3UTR TCA 90 bp AGCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCTCTGGGCCCCTGTaGAGTCCACATAGCAGCGCA +
Preference number: 2 (lower is better)
Translates to: SLVPRQQEESRTLARRPDGSGPL*SPHSSA
Trigger: TGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCC...ATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCGTCTTTGCGCTGGGCTaGCCAGTCCAGAAGGCTCCA +
Preference number: 2 (lower is better)
Translates to: QEETSPGLCAGLASPEGSVFALG*PVQKAP
Trigger: TGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGAC...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR CCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCTCCTGGTCTTTGCGCTaGGCTGGCCAGTCCAGAAGG +
Preference number: 2 (lower is better)
Translates to: QEETSPGLCAGLASPEGSSWSLR*AGQSRR
Trigger: CCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGA...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR CCA 90 bp TGGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCCAACCCAGAGGCCTCTaGCACATCCATGGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: WAESPSTRPKSRRRQVLVQPRGL*HIHGCW
Trigger: CCAGCACCCATGGATGTGCCAGAGGCCTCTGGGTTG...GACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CCA 90 bp GTGTCAGAAGAGCCGGGGGACCAGGTGGATGACCGGCTGACACTCCTCAGGGCTCGTACTCCAGCTTGGTaGCATCCATGGCAGCGAGCA +
Preference number: 2 (lower is better)
Translates to: VSEEPGDQVDDRLTLLRARTPAW*HPWQRA
Trigger: TGCTCGCTGCCATGGATGCCACCAAGCTGGAGTACG...AGCCCTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCCGGCTCTTCTGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
3UTR-3UTR CCA 90 bp TGGTCGATGAGGATGCGCTGGAAGGCCTTGCTGCCAGGCGACTGCTGGTGCCTTTCGATGAGGATGCGCTaGAAGGCCTTGCTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: WSMRMRWKALLPGDCWCLSMRMR*KALLPG
Trigger: GCCTGGCAGCAAGGCCTTCCAGCGCATCCTCATCGA...AAGGCACCAGCAGTCGCCTGGCAGCAAGGCCTTCCAGCGCATCCTCATCGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR CAA 90 bp GCAGGCAGGGTCCCGGGGCCCTCGGCGTGTGCAGGTCTGGCTCAGTaGTTATTCATTATCCACCAGGAGGCTGGGAAGAACACAGTGGTG +
Preference number: 2 (lower is better)
Translates to: AGRVPGPSACAGLAQ*LFIIHQEAGKNTVV
Trigger: CACCACTGTGTTCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCACACGCCGAGGGCCCCGGGACCCTGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR TCA 90 bp AGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAGGCTTGGAGGCTGAAGTaGCAAACAATAAAATACAGG +
Preference number: 2 (lower is better)
Translates to: SLVAWEGDGAPSSGPASEAWRLK*QTIKYR
Trigger: CCTGTATTTTATTGTTTGTCACTTCAGCCTCCAAGC...CTCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR TCA 90 bp GTCCCTGAGCATCAGCCCTGCTTCTGCCGCTGGCTGAGGAGGAGCAGAAGCCTGAGAATCCAGGTCTCCTaGGCCAGGCAGAAGCCAAAG +
Preference number: 2 (lower is better)
Translates to: VPEHQPCFCRWLRRSRSLRIQVS*ARQKPK
Trigger: CTTTGGCTTCTGCCTGGCTCAGGAGACCTGGATTCT...CAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCGGAGGAGCAGAAGCCTaGTCCCAAGACAGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: QEETSPGLCAGLASPEGSGGAEA*SQDSRK
Trigger: CTTCCTGCTGTCTTGGGACCAGGCTTCTGCTCCTCC...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CCA 90 bp TGGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTGGCCAGGTCACCTTaGGGCTTCCCATACTGCCCT +
Preference number: 2 (lower is better)
Translates to: WAESPSTRPKSRRRQVLVLARSP*GFPYCP
Trigger: AGGGCAGTATGGGAAGCCCCAAGGTGACCTGGCCAA...GACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCGTACTCCAGCTTGGTaGCATCCATGGCAGCGAGCA +
Preference number: 2 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGRTPAW*HPWQRA
Trigger: TGCTCGCTGCCATGGATGCCACCAAGCTGGAGTACG...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CCA 90 bp GAACACAGTGGTGAGGGTGTCCGGGGCCCGCAGGTGGTCGATGAGGATGCGCTGCAAACTGGTCCACTTTaGAGGCCCTCTCGTACTCCA +
Preference number: 2 (lower is better)
Translates to: EHSGEGVRGPQVVDEDALQTGPL*RPSRTP
Trigger: TGGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTG...CAGCGCATCCTCATCGACCACCTGCGGGCCCCGGACACCCTCACCACTGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CCA 90 bp GGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACATAGCAGCGCAGTGGAGGCGGTTCACCTaGAGCCGCCACTGCATCTCG +
Preference number: 2 (lower is better)
Translates to: GHMQTMALGPCEVHIAAQWRRFT*SRHCIS
Trigger: CGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCA...CTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
3UTR-3UTR CCA 90 bp TTGCACTCGAGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCAGACAATGGCTCTaGGCCCCTGTGAAGTCCACA +
Preference number: 2 (lower is better)
Translates to: LHSSWSMSSWRRFTWSRHCRQWL*APVKST
Trigger: TGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCA...GTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
3UTR-3UTR CCA 90 bp TGGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCATGGCTACCCTGCCATaGCTTCCCCGCCCGAAAATG +
Preference number: 2 (lower is better)
Translates to: WAESPSTRPKSRRRQVLVMATLP*LPRPKM
Trigger: CATTTTCGGGCGGGGAAGCCATGGCAGGGTAGCCAT...GACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR TCA 90 bp GTTCAGAGGCCTCTGGGGGCAATAGGTGACCCTGGACCCAAATTATTGCTACTTGGCGGCCAGATGGCCTaGGGCCCACCCAGACAGGGA +
Preference number: 2 (lower is better)
Translates to: VQRPLGAIGDPGPKLLLLGGQMA*GPPRQG
Trigger: TCCCTGTCTGGGTGGGCCTCAGGCCATCTGGCCGCC...AAGTAGCAATAATTTGGGTCCAGGGTCACCTATTGCCCCCAGAGGCCTCTGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR TCA 90 bp TGGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCAGAACTCATACAGGGTaGAGGAGGCACCGTCCAGCA +
Preference number: 2 (lower is better)
Translates to: WAESPSTRPKSRRRQVLVRTHTG*RRHRPA
Trigger: TGCTGGACGGTGCCTCCTTCACCCTGTATGAGTTCT...GACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR GCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGTGGGGCTTCCCATACTaGCCTGAGAATGGGTGGGAT +
Preference number: 2 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGWGFPY*PENGWD
Trigger: ATCCCACCCATTCTCAGGGCAGTATGGGAAGCCCCA...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR GCA 90 bp GGTGAAGGAGGCACCGTCCAGCATCTTCTGGGCGGACACATGCAGACAATGGCTCCTTTATTGCCTCTGTaGTGGGGTCCCAGCCTGGGG +
Preference number: 2 (lower is better)
Translates to: GEGGTVQHLLGGHMQTMAPLLPL*WGPSLG
Trigger: CCCCAGGCTGGGACCCCAGCACAGAGGCAATAAAGG...AGCCATTGTCTGCATGTGTCCGCCCAGAAGATGCTGGACGGTGCCTCCTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR GCA 90 bp CCGCCCGAAAATGCAGGCTCCAGGATGCTGGGACTGTGGGGATTTGGAATGGGGTTCTGGGCGGACACATaGAGACAATGGCTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: PPENAGSRMLGLWGFGMGFWADT*RQWLWA
Trigger: GGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAA...CCCCATTCCAAATCCCCACAGTCCCAGCATCCTGGAGCCTGCATTTTCGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR GCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGATGCAGGCTCCAGGATaGTGGGACTGTGGGGATTTG +
Preference number: 2 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGMQAPG*WDCGDL
Trigger: CAAATCCCCACAGTCCCAGCATCCTGGAGCCTGCAT...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CCA 90 bp GCTCCAGGATGCTGGGACTGTGGGGATTTGGAATGGGGGTACAATGGGCGCTTGGGAGGAGACAAGTCCTaGTCTTTGCGCTGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: APGCWDCGDLEWGYNGRLGGDKS*SLRWAG
Trigger: GCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCC...CAAGCGCCCATTGTACCCCCATTCCAAATCCCCACAGTCCCAGCATCCTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CCA 90 bp CAGAACTCATACAGGGTGAAGGAGGCACCGTCCAGCATCTTCTGGGCGGACACATGGAGGCGGTTCACCTaGAGCCGCCACTGCATCTCG +
Preference number: 2 (lower is better)
Translates to: QNSYRVKEAPSSIFWADTWRRFT*SRHCIS
Trigger: CGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCA...TGTGTCCGCCCAGAAGATGCTGGACGGTGCCTCCTTCACCCTGTATGAGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR CCA 90 bp GGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACATAGCAGCGCAGTGGTCGATGAGCTCCTaGAGGCGGTTCACCTGGAGC +
Preference number: 2 (lower is better)
Translates to: GHMQTMALGPCEVHIAAQWSMSS*RRFTWS
Trigger: GCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCA...CTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
3UTR-3UTR CCA 90 bp TGGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCGACACATGCAGACAATaGCTCTGGGCCCCTGTGAAG +
Preference number: 2 (lower is better)
Translates to: WAESPSTRPKSRRRQVLVDTCRQ*LWAPVK
Trigger: CTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTC...GACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR CCA 90 bp CTCCGAGGCCTAGCCCCAAAGCCAGTCTCATTTCACCCCGCCATGGCTACCCTGCCGTCCAGCATCTTCTaGGCGGACACATGCAGACAA +
Preference number: 2 (lower is better)
Translates to: LRGLAPKPVSFHPAMATLPSSIF*ADTCRQ
Trigger: TTGTCTGCATGTGTCCGCCCAGAAGATGCTGGACGG...CAGGGTAGCCATGGCGGGGTGAAATGAGACTGGCTTTGGGGCTAGGCCTCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CCA 90 bp AGCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATCATTTCACCCCGCCATaGCTACCCTGCCATGGCTTC +
Preference number: 2 (lower is better)
Translates to: SLVPRQQEESRTLARRPDHFTPP*LPCHGF
Trigger: GAAGCCATGGCAGGGTAGCCATGGCGGGGTGAAATG...ATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CCA 90 bp AGGGTGAAGGAGGCACCGTCCAGCATCTTCTGGGCGGACACATGCAGACAATGGCGGGATAAGCCTGGGTaGGGAAGACAAGCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: RVKEAPSSIFWADTCRQWRDKPG*GRQASW
Trigger: CCAGGAGGCTTGTCTTCCCCACCCAGGCTTATCCCG...CCATTGTCTGCATGTGTCCGCCCAGAAGATGCTGGACGGTGCCTCCTTCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR GCA 90 bp AGGGTGAAGGAGGCACCGTCCAGCATCTTCTGGGCGGACACATGCAGACAATGGACAAGTCCTGGTCTTTaGGCTGGGCTGGCCAGTCCA +
Preference number: 2 (lower is better)
Translates to: RVKEAPSSIFWADTCRQWTSPGL*AGLASP
Trigger: TGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT...CCATTGTCTGCATGTGTCCGCCCAGAAGATGCTGGACGGTGCCTCCTTCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR GCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCTGGCACATCCATGGGTaGTGGAAGAGTCAGAGCCTA +
Preference number: 2 (lower is better)
Translates to: QEETSPGLCAGLASPEGSWHIHG*WKSQSL
Trigger: TAGGCTCTGACTCTTCCAGCACCCATGGATGTGCCA...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CCA 90 bp TCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATCAGAGCCTAGTGGCCTaGGAGGGCGACGGGGCACCC +
Preference number: 2 (lower is better)
Translates to: SHTALRMGGMRACKRYANQSLVA*EGDGAP
Trigger: GGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTCTG...ATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CCA 90 bp ATCTTCTGGGCGGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACAGCTTGGTGGCATCCATaGCAGCGAGCACTGCACGGT +
Preference number: 2 (lower is better)
Translates to: IFWADTCRQWLWAPVKSTAWWHP*QRALHG
Trigger: ACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGC...TGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CCA 90 bp CCGCCCGAAAATGCAGGCTCCAGGATGCTGGGACTGTGGGGATTTGGAATGGGGTGCAGACAATGGCTCTaGGCCCCTGTGAAGTCCACA +
Preference number: 2 (lower is better)
Translates to: PPENAGSRMLGLWGFGMGCRQWL*APVKST
Trigger: TGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCA...CCCCATTCCAAATCCCCACAGTCCCAGCATCCTGGAGCCTGCATTTTCGGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CCA 90 bp CGTGTGCAGGTCTGGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGGGAAGATCCGGGGCCCGCAGGTaGTCGATGAGGATGCGCTGG +
Preference number: 2 (lower is better)
Translates to: RVQVWLSCYSLSTRRLGRSGARR*SMRMRW
Trigger: CCAGCGCATCCTCATCGACCACCTGCGGGCCCCGGA...TCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR TCA 90 bp AGGGTGAAGGAGGCACCGTCCAGCATCTTCTGGGCGGACACATGCAGACAATGGACTAGCCCCACAGGTTaGCAGCACCCTTACATACCG +
Preference number: 2 (lower is better)
Translates to: RVKEAPSSIFWADTCRQWTSPTG*QHPYIP
Trigger: CGGTATGTAAGGGTGCTGTCAACCTGTGGGGCTAGT...CCATTGTCTGCATGTGTCCGCCCAGAAGATGCTGGACGGTGCCTCCTTCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CCA 90 bp GGTGAAGGAGGCACCGTCCAGCATCTTCTGGGCGGACACATGCAGACAATGGCTAAGCGCGTCACAAACTaGTCCACTTTGGAGGCCCTC +
Preference number: 2 (lower is better)
Translates to: GEGGTVQHLLGGHMQTMAKRVTN*STLEAL
Trigger: GAGGGCCTCCAAAGTGGACCAGTTTGTGACGCGCTT...AGCCATTGTCTGCATGTGTCCGCCCAGAAGATGCTGGACGGTGCCTCCTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR TCA 90 bp AGCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATTCTGGGGGCAATAGGTaGCCCTGGACCCAAATTATT +
Preference number: 2 (lower is better)
Translates to: SLVPRQQEESRTLARRPDSGGNR*PWTQII
Trigger: AATAATTTGGGTCCAGGGTCACCTATTGCCCCCAGA...ATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR TCA 90 bp CGTGTGCAGGTCTGGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGGGAAGACTGCATCTCGGCCTCTaGGCTGCGCCCTGTGTCAGA +
Preference number: 2 (lower is better)
Translates to: RVQVWLSCYSLSTRRLGRLHLGL*AAPCVR
Trigger: TCTGACACAGGGCGCAGCTCAGAGGCCGAGATGCAG...TCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR GCA 90 bp GTGTGCAGGTCTGGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGGGAAGAACCGCAGAGCCTGCTCTaGGCCTCCACGCTCTCTGCA +
Preference number: 2 (lower is better)
Translates to: VCRSGSVVIHYPPGGWEEPQSLL*ASTLSA
Trigger: TGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGG...TTCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR GCA 90 bp CGTGTGCAGGTCTGGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGGGAAGACTGCAGGCCTTCCTCTaGCACCTGGACCTGCCTCTG +
Preference number: 2 (lower is better)
Translates to: RVQVWLSCYSLSTRRLGRLQAFL*HLDLPL
Trigger: CAGAGGCAGGTCCAGGTGGCAGAGGAAGGCCTGCAG...TCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR CCA 90 bp TTCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAACGCCAGCCATGGGCCTaGGCCTCCAGGGTATCTGAC +
Preference number: 2 (lower is better)
Translates to: FPYCPENGWDEGMQTICKRQPWA*ASRVSD
Trigger: GTCAGATACCCTGGAGGCCCAGGCCCATGGCTGGCG...TTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CCA 90 bp GGTGAAGGAGGCACCGTCCAGCATCTTCTGGGCGGACACATGCAGACAATGGCTTATCCACCAGGAGGCTaGGAAGAACACAGTGGTGAG +
Preference number: 2 (lower is better)
Translates to: GEGGTVQHLLGGHMQTMAYPPGG*EEHSGE
Trigger: CTCACCACTGTGTTCTTCCCAGCCTCCTGGTGGATA...AGCCATTGTCTGCATGTGTCCGCCCAGAAGATGCTGGACGGTGCCTCCTTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR TCA 90 bp TGCAGGTCTGGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGGGAAGAACACCCTGCCTCTGGGCCATaGGGATGTGCAAGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: CRSGSVVIHYPPGGWEEHPASGP*GCASQA
Trigger: GGCCTGACTTGCACATCCTCATGGCCCAGAGGCAGG...GTGTTCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR GCA 90 bp TCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATCCTGAGCATCAGCCCTaGTTCTGCCGCTGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: SHTALRMGGMRACKRYANPEHQP*FCRWLR
Trigger: CCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGG...ATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR GCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGGATATGCAAATGACATaGAAACCAACCCAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGDMQMT*KPTQRP
Trigger: AGGCCTCTGGGTTGGTTTGCATGTCATTTGCATATC...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CCA 90 bp CGTGTGCAGGTCTGGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGGGAAGAGCAAGTCAGGCCCCTTaGCCAGGTCCTCTTCACGCA +
Preference number: 2 (lower is better)
Translates to: RVQVWLSCYSLSTRRLGRASQAP*PGPLHA
Trigger: TGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGC...TCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR TCA 90 bp GGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGCAAACGATATGCAAATaGCATGCAAACCAACCCAGA +
Preference number: 2 (lower is better)
Translates to: GGDKSWSLRWAGQSRRLQQTICK*HANQPR
Trigger: TCTGGGTTGGTTTGCATGTCATTTGCATATCGTTTG...CTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR TCA 90 bp TTCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAAGCCCATCAATGCCGCTaGACAGTTCCTGCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: FPYCPENGWDEGMQTICKAHQCR*TVPAAP
Trigger: GGGAGCTGCAGGAACTGTTCAGCGGCATTGATGGGC...TTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR GCA 90 bp AGCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGATATGCAAATGACATaGAAACCAACCCAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: SLVPRQQEESRTLARRPDDMQMT*KPTQRP
Trigger: AGGCCTCTGGGTTGGTTTGCATGTCATTTGCATATC...ATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR GCA 90 bp TTCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATTGCTGCCAGGCGACTaGTGGTGCCTTCTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: FPYCPENGWDEGMQTICKLLPGD*WCLLQE
Trigger: CTCCTGGAGAAGGCACCAGCAGTCGCCTGGCAGCAA...TTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR GCA 90 bp GCTCCAGGATGCTGGGACTGTGGGGATTTGGAATGGGGGTACAATGGGCGCTTGAAATTGTCGGTGAGATaGCCATCAATGCCGCTGAAC +
Preference number: 2 (lower is better)
Translates to: APGCWDCGDLEWGYNGRLKLSVR*PSMPLN
Trigger: GTTCAGCGGCATTGATGGGCATCTCACCGACAATTT...CAAGCGCCCATTGTACCCCCATTCCAAATCCCCACAGTCCCAGCATCCTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CCA 90 bp TTCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAACAACCCAGAGGCCTCTaGCACATCCATGGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: FPYCPENGWDEGMQTICKQPRGL*HIHGCW
Trigger: CCAGCACCCATGGATGTGCCAGAGGCCTCTGGGTTG...TTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR GCA 90 bp CATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATGACACAAGTCCTGGTCTTTaGGCTGGGCTGGCCAGTCCA +
Preference number: 2 (lower is better)
Translates to: HTALRMGGMRACKRYANDTSPGL*AGLASP
Trigger: TGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT...GTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR GCA 90 bp GTGTGCAGGTCTGGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGGGAAGAAACAAGTCCTGGTCTTTaGGCTGGGCTGGCCAGTCCA +
Preference number: 2 (lower is better)
Translates to: VCRSGSVVIHYPPGGWEETSPGL*AGLASP
Trigger: TGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT...TTCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR CCA 90 bp CATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATGACGGAGGAGCAGAAGCCTaGTCCCAAGACAGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: HTALRMGGMRACKRYANDGGAEA*SQDSRK
Trigger: CTTCCTGCTGTCTTGGGACCAGGCTTCTGCTCCTCC...GTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CCA 90 bp TTCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAAGCAAGGTTTGAGGGTTaGGGGGTCCCTGAGCATCAG +
Preference number: 2 (lower is better)
Translates to: FPYCPENGWDEGMQTICKARFEG*GVPEHQ
Trigger: CTGATGCTCAGGGACCCCCCAACCCTCAAACCTTGC...TTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CCA 90 bp CATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATGACGCAAGGTTTGAGGGTTaGGGGGTCCCTGAGCATCAG +
Preference number: 2 (lower is better)
Translates to: HTALRMGGMRACKRYANDARFEG*GVPEHQ
Trigger: CTGATGCTCAGGGACCCCCCAACCCTCAAACCTTGC...GTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CCA 90 bp GTTCAGAGGCCTCTGGGGGCAATAGGTGACCCTGGACCCAAATTATTGCTACTTCCTCTGGCACATCCATaGGTGCTGGAAGAGTCAGAG +
Preference number: 2 (lower is better)
Translates to: VQRPLGAIGDPGPKLLLLPLAHP*VLEESE
Trigger: CTCTGACTCTTCCAGCACCCATGGATGTGCCAGAGG...AAGTAGCAATAATTTGGGTCCAGGGTCACCTATTGCCCCCAGAGGCCTCTGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CCA 90 bp CATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATGACCCTCTGGCACATCCATaGGTGCTGGAAGAGTCAGAG +
Preference number: 2 (lower is better)
Translates to: HTALRMGGMRACKRYANDPLAHP*VLEESE
Trigger: CTCTGACTCTTCCAGCACCCATGGATGTGCCAGAGG...GTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CCA 90 bp GTGTGCAGGTCTGGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGGGAAGAATCTCGTACTCCAGCTTaGTGGCATCCATGGCAGCGA +
Preference number: 2 (lower is better)
Translates to: VCRSGSVVIHYPPGGWEESRTPA*WHPWQR
Trigger: TCGCTGCCATGGATGCCACCAAGCTGGAGTACGAGA...TTCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR TCA 90 bp TGCAGGTCTGGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGGGAAGAACACTTTCTAAATTGTCGGTaGGATGCCCATCAATGCCGC +
Preference number: 2 (lower is better)
Translates to: CRSGSVVIHYPPGGWEEHFLNCR*DAHQCR
Trigger: GCGGCATTGATGGGCATCTCACCGACAATTTAGAAA...GTGTTCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CCA 90 bp GTGTGCAGGTCTGGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGGGAAGAACAAATTATTGCTACTTaGCCAGGTCACCTTGGGGCT +
Preference number: 2 (lower is better)
Translates to: VCRSGSVVIHYPPGGWEEQIIAT*PGHLGA
Trigger: AGCCCCAAGGTGACCTGGCCAAGTAGCAATAATTTG...TTCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR TCA 90 bp CATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATGACGCTTGGAGGCTGAAGTaGCAAACAATAAAATACAGG +
Preference number: 2 (lower is better)
Translates to: HTALRMGGMRACKRYANDAWRLK*QTIKYR
Trigger: CCTGTATTTTATTGTTTGTCACTTCAGCCTCCAAGC...GTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR GCA 72 bp CGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCTGCTCTaGGCCTCCACGCTCTCTGCATCTGACCGCCAGCCA +
Preference number: 3 (lower is better)
Translates to: RRPARRLPQSLL*ASTLSASDRQP
Trigger: TGGCTGGCGGTCAGATGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGGCAGCCGGCGGGCAGGACGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493590.1
3UTR-3UTR CAA 90 bp CGGCTGACACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCTGCGAGCTCTGAAGGGCTaGCAGCTGGCTCACCGTCTC +
Preference number: 3 (lower is better)
Translates to: RLTLLRARRPARRLPQSLRALKG*QLAHRL
Trigger: GAGACGGTGAGCCAGCTGCAAGCCCTTCAGAGCTCG...CAGGCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
3UTR TCA 72 bp TGTCAGAAGAGCCGGGGGACCAGGTGGATGACCGGCTaGCACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGC +
Preference number: 3 (lower is better)
Translates to: CQKSRGTRWMTG*HSSGLGVLPAG
Trigger: GCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCCGGCTCTTCTGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000493590.1
3UTR GCA 72 bp AGATGGCCTGAGGCCCACCCAGACAGGGACGGGACCTaGCCTGGGTCGCTCAGCCAGGCAGGGACAGCAGGG +
Preference number: 3 (lower is better)
Translates to: RWPEAHPDRDGT*PGSLSQAGTAG
Trigger: CCCTGCTGTCCCTGCCTGGCTGAGCGACCCAGGGCAGGTCCCGTCCCTGTCTGGGTGGGCCTCAGGCCATCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CAA 90 bp GAGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAGACAAGTCCTGGTCTTaGCGCTGGGCTGGCCAGTCC +
Preference number: 3 (lower is better)
Translates to: EPSGLGGRRGTQLRPSLGDKSWS*RWAGQS
Trigger: GGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTC...TCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR TCA 72 bp GCGCCCTGTGTCAGAAGAGCCGGGGGACCAGGTGGATaGCCGGCTGACACTCCTCAGGGCTCGGCGTCCTGC +
Preference number: 3 (lower is better)
Translates to: APCVRRAGGPGG*PADTPQGSASC
Trigger: GCAGGACGCCGAGCCCTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCCGGCTCTTCTGACACAGGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR GCA 72 bp CGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCTGCTCTaGGCCTCCACGCTCTCTGCATCTGACCTAGAGGAA +
Preference number: 3 (lower is better)
Translates to: RRPARRLPQSLL*ASTLSASDLEE
Trigger: TTCCTCTAGGTCAGATGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGGCAGCCGGCGGGCAGGACGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR CCA 72 bp TCCACGCTCTCTGCATCTGACCGCCAGCCATGGGCCTaGGCCTCCAGGGTATCTGACGCCCCCTCCAGCGAG +
Preference number: 3 (lower is better)
Translates to: STLSASDRQPWA*ASRVSDAPSSE
Trigger: CTCGCTGGAGGGGGCGTCAGATACCCTGGAGGCCCAGGCCCATGGCTGGCGGTCAGATGCAGAGAGCGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493590.1
3UTR CCA 72 bp GTGTCCGGGGCCCGCAGGTGGTCGATGAGGATGCGCTaGAAGGCCTTGCTGCCAGGCGACTGCTGGTGCCTT +
Preference number: 3 (lower is better)
Translates to: VSGARRWSMRMR*KALLPGDCWCL
Trigger: AAGGCACCAGCAGTCGCCTGGCAGCAAGGCCTTCCAGCGCATCCTCATCGACCACCTGCGGGCCCCGGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR CAA 90 bp CGGCCTCTGAGCTGCGCCCTGTGTCAGAAGAGCCGGGGGACCAGGTGGATGACCCTTGGCCAGGTCACCTaGGGGCTTCCCATACTGCCC +
Preference number: 3 (lower is better)
Translates to: RPLSCALCQKSRGTRWMTLGQVT*GLPILP
Trigger: GGGCAGTATGGGAAGCCCCAAGGTGACCTGGCCAAG...GGTCATCCACCTGGTCCCCCGGCTCTTCTGACACAGGGCGCAGCTCAGAGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR TCA 72 bp ATACCGCCAGCCATGGGCCTGGGCCTCCAGGGTATCTaGCGCCCCCTCCAGCGAGCTCTGAAGGGCTTGCAG +
Preference number: 3 (lower is better)
Translates to: IPPAMGLGLQGI*RPLQRALKGLQ
Trigger: CTGCAAGCCCTTCAGAGCTCGCTGGAGGGGGCGTCAGATACCCTGGAGGCCCAGGCCCATGGCTGGCGGTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR CCA 72 bp TCCTGCAGGCCTTCCTCTGCCACCTGGACCTGCCTCTaGGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCC +
Preference number: 3 (lower is better)
Translates to: SCRPSSATWTCL*AMRMCKSGPLA
Trigger: GGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCAGAGGCAGGTCCAGGTGGCAGAGGAAGGCCTGCAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
3UTR CCA 72 bp CCACAGGTTGACAGCACCCTTACATACCGCCAGCCATaGGCCTGGGCCTCCAGGGTATCTGACGCCCCCTCC +
Preference number: 3 (lower is better)
Translates to: PQVDSTLTYRQP*AWASRVSDAPS
Trigger: GGAGGGGGCGTCAGATACCCTGGAGGCCCAGGCCCATGGCTGGCGGTATGTAAGGGTGCTGTCAACCTGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CAA 90 bp ATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGCCTCTGAGCGAGCTCTGAAGGGCTaGCAGCTGGCTCACCGTCTC +
Preference number: 3 (lower is better)
Translates to: MSSWRRFTWSRHCISASERALKG*QLAHRL
Trigger: GAGACGGTGAGCCAGCTGCAAGCCCTTCAGAGCTCG...CTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CAA 90 bp GTGTCAGAAGAGCCGGGGGACCAGGTGGATGACCGGCTGACACTCCTCAGGGCTTGCAAGTCAGGCCCCTaGGCCAGGTCCTCTTCACGC +
Preference number: 3 (lower is better)
Translates to: VSEEPGDQVDDRLTLLRACKSGP*ARSSSR
Trigger: GCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCA...AGCCCTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCCGGCTCTTCTGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR TCA 72 bp GCAGAGCCTGCTCTGCGCCTCCACGCTCTCTGCATCTaGCCTAGAGGAAGTGAGGCTCACAGGGCCGAGGAC +
Preference number: 3 (lower is better)
Translates to: AEPALRLHALCI*PRGSEAHRAED
Trigger: GTCCTCGGCCCTGTGAGCCTCACTTCCTCTAGGTCAGATGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR GCA 72 bp CATGGCAGCGAGCACTGCACGGTTCAGCGATTCCAATaGAGCCAGCACCGGCCGGTAGACACCCAGGTGCTC +
Preference number: 3 (lower is better)
Translates to: HGSEHCTVQRFQ*SQHRPVDTQVL
Trigger: GAGCACCTGGGTGTCTACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
3UTR GCA 72 bp ATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTaGATCTCGGCCTCTGAGCTGCGCCCTGTGTCAGAA +
Preference number: 3 (lower is better)
Translates to: MSSWRRFTWSRH*ISASELRPVSE
Trigger: TTCTGACACAGGGCGCAGCTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR CCA 72 bp AAGAACACAGTGGTGAGGGTGTCCGGGGCCCGCAGGTaGTCGATGAGGATGCGCTGGAAGGCCTTGCTGCCA +
Preference number: 3 (lower is better)
Translates to: KNTVVRVSGARR*SMRMRWKALLP
Trigger: TGGCAGCAAGGCCTTCCAGCGCATCCTCATCGACCACCTGCGGGCCCCGGACACCCTCACCACTGTGTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR CAA 90 bp GGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGCTTGGCCAGGTCACCTaGGGGCTTCCCATACTGCCC +
Preference number: 3 (lower is better)
Translates to: GGDKSWSLRWAGQSRRLQLGQVT*GLPILP
Trigger: GGGCAGTATGGGAAGCCCCAAGGTGACCTGGCCAAG...CTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CAA 90 bp CGCAGAGCCTGCTCTGCGCCTCCACGCTCTCTGCATCTGACCGCCAGCCATGGGACAAACTGGTCCACTTaGGAGGCCCTCTCGTACTCC +
Preference number: 3 (lower is better)
Translates to: RRACSAPPRSLHLTASHGTNWST*EALSYS
Trigger: GGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTGT...CCCATGGCTGGCGGTCAGATGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493590.1
3UTR-3UTR CAA 90 bp CCGCCCGAAAATGCAGGCTCCAGGATGCTGGGACTGTGGGGATTTGGAATGGGGGACAAGTCCTGGTCTTaGCGCTGGGCTGGCCAGTCC +
Preference number: 3 (lower is better)
Translates to: PPENAGSRMLGLWGFGMGDKSWS*RWAGQS
Trigger: GGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTC...CCCCATTCCAAATCCCCACAGTCCCAGCATCCTGGAGCCTGCATTTTCGGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CAA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGGGACCACTGCCTTTATaGCCTCTGTGCTGGGGTCCC +
Preference number: 3 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGGPLPL*PLCWGP
Trigger: GGGACCCCAGCACAGAGGCAATAAAGGCAGTGGTCC...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CAA 90 bp CTCCGAGGCCTAGCCCCAAAGCCAGTCTCATTTCACCCCGCCATGGCTACCCTGGGGTACAATGGGCGCTaGTGCACTAGCCCCACAGGT +
Preference number: 3 (lower is better)
Translates to: LRGLAPKPVSFHPAMATLGYNGR*CTSPTG
Trigger: ACCTGTGGGGCTAGTGCACAAGCGCCCATTGTACCC...CAGGGTAGCCATGGCGGGGTGAAATGAGACTGGCTTTGGGGCTAGGCCTCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR TCA 72 bp GGGCGGACACATGCAGACAATGGCTCTGGGCCCCTGTaGAGTCCACATAGCAGCGCAGGGCTCGGTGGAAGT +
Preference number: 3 (lower is better)
Translates to: GRTHADNGSGPL*SPHSSAGLGGS
Trigger: ACTTCCACCGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
3UTR CCA 72 bp CCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTaGGCTGGCCAGTCCAGAAGGCTCCAGAGGGAGGCA +
Preference number: 3 (lower is better)
Translates to: PSPGGDKSWSLR*AGQSRRLQREA
Trigger: TGCCTCCCTCTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
3UTR CCA 72 bp CTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTaGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTC +
Preference number: 3 (lower is better)
Translates to: LPPGPSPGGDKS*SLRWAGQSRRL
Trigger: GAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
3UTR CCA 72 bp CAGGCAGGGTCCCGGGGCCCTCGGCGTGTGCAGGTCTaGCTCAGTTGTTATTCATTATCCACCAGGAGGCTG +
Preference number: 3 (lower is better)
Translates to: QAGSRGPRRVQV*LSCYSLSTRRL
Trigger: CAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCACACGCCGAGGGCCCCGGGACCCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR-3UTR CAA 90 bp AGGGTGAAGGAGGCACCGTCCAGCATCTTCTGGGCGGACACATGCAGACAATGGGACAAGTCCTGGTCTTaGCGCTGGGCTGGCCAGTCC +
Preference number: 3 (lower is better)
Translates to: RVKEAPSSIFWADTCRQWDKSWS*RWAGQS
Trigger: GGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTC...CCATTGTCTGCATGTGTCCGCCCAGAAGATGCTGGACGGTGCCTCCTTCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR TCA 72 bp GGGTACAATGGGCGCTTGTGCACTAGCCCCACAGGTTaGCAGCACCCTTACATACCGCCAGCCATGGGCCTG +
Preference number: 3 (lower is better)
Translates to: GYNGRLCTSPTG*QHPYIPPAMGL
Trigger: CAGGCCCATGGCTGGCGGTATGTAAGGGTGCTGTCAACCTGTGGGGCTAGTGCACAAGCGCCCATTGTACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR GCA 72 bp GTACTCCAGCTTGGTGGCATCCATGGCAGCGAGCACTaGACGGTTCAGCGATTCCAATGCAGCCAGCACCGG +
Preference number: 3 (lower is better)
Translates to: VLQLGGIHGSEH*TVQRFQCSQHR
Trigger: CCGGTGCTGGCTGCATTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGAGTAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
3UTR CCA 72 bp CTCACCGTCTCCCGCAGCAGGAAGCGCGTCACAAACTaGTCCACTTTGGAGGCCCTCTCGTACTCCAGCTTG +
Preference number: 3 (lower is better)
Translates to: LTVSRSRKRVTN*STLEALSYSSL
Trigger: CAAGCTGGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTGTGACGCGCTTCCTGCTGCGGGAGACGGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
3UTR-3UTR CAA 90 bp GGTGAAGGAGGCACCGTCCAGCATCTTCTGGGCGGACACATGCAGACAATGGCTGGACCACTGCCTTTATaGCCTCTGTGCTGGGGTCCC +
Preference number: 3 (lower is better)
Translates to: GEGGTVQHLLGGHMQTMAGPLPL*PLCWGP
Trigger: GGGACCCCAGCACAGAGGCAATAAAGGCAGTGGTCC...AGCCATTGTCTGCATGTGTCCGCCCAGAAGATGCTGGACGGTGCCTCCTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CAA 90 bp TGGTCGATGAGGATGCGCTGGAAGGCCTTGCTGCCAGGCGACTGCTGGTGCCTTACAAACTGGTCCACTTaGGAGGCCCTCTCGTACTCC +
Preference number: 3 (lower is better)
Translates to: WSMRMRWKALLPGDCWCLTNWST*EALSYS
Trigger: GGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTGT...AAGGCACCAGCAGTCGCCTGGCAGCAAGGCCTTCCAGCGCATCCTCATCGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR CCA 72 bp CCGCCCGAAAATGCAGGCTCCAGGATGCTGGGACTGTaGGGATTTGGAATGGGGGTACAATGGGCGCTTGTG +
Preference number: 3 (lower is better)
Translates to: PPENAGSRMLGL*GFGMGVQWALV
Trigger: CACAAGCGCCCATTGTACCCCCATTCCAAATCCCCACAGTCCCAGCATCCTGGAGCCTGCATTTTCGGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CAA 90 bp GGCCTCATCCTGCCAGAACTCATACAGGGTGAAGGAGGCACCGTCCAGCATCTTCTCTCGTACTCCAGCTaGGTGGCATCCATGGCAGCG +
Preference number: 3 (lower is better)
Translates to: GLILPELIQGEGGTVQHLLSYSS*VASMAA
Trigger: CGCTGCCATGGATGCCACCAAGCTGGAGTACGAGAG...AAGATGCTGGACGGTGCCTCCTTCACCCTGTATGAGTTCTGGCAGGATGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
3UTR-3UTR CAA 90 bp GTCCCTGAGCATCAGCCCTGCTTCTGCCGCTGGCTGAGGAGGAGCAGAAGCCTGAGAAGCCAAAGTAGCTaGGAGGCTGAAGTGACAAAC +
Preference number: 3 (lower is better)
Translates to: VPEHQPCFCRWLRRSRSLRSQSS*EAEVTN
Trigger: GTTTGTCACTTCAGCCTCCAAGCTACTTTGGCTTCT...CAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR GCA 72 bp TGCTACTTGGCCAGGTCACCTTGGGGCTTCCCATACTaGCCTGAGAATGGGTGGGATGAGGGCATGCAAACG +
Preference number: 3 (lower is better)
Translates to: CYLARSPWGFPY*PENGWDEGMQT
Trigger: CGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGAAGCCCCAAGGTGACCTGGCCAAGTAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR TCA 72 bp AATGGGTGGGATGAGGGCATGCAAACGATATGCAAATaGCATGCAAACCAACCCAGAGGCCTCTGGCACATC +
Preference number: 3 (lower is better)
Translates to: NGWDEGMQTICK*HANQPRGLWHI
Trigger: GATGTGCCAGAGGCCTCTGGGTTGGTTTGCATGTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CAA 90 bp CATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATGACAGAAGCCAAAGTAGCTaGGAGGCTGAAGTGACAAAC +
Preference number: 3 (lower is better)
Translates to: HTALRMGGMRACKRYANDRSQSS*EAEVTN
Trigger: GTTTGTCACTTCAGCCTCCAAGCTACTTTGGCTTCT...GTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR-3UTR CAA 90 bp GTGTGCAGGTCTGGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGGGAAGAATTTTCTGTTTCTAAATaGTCGGTGAGATGCCCATCA +
Preference number: 3 (lower is better)
Translates to: VCRSGSVVIHYPPGGWEEFSVSK*SVRCPS
Trigger: TGATGGGCATCTCACCGACAATTTAGAAACAGAAAA...TTCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR TCA 90 bp GAGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAGGAGCAGGCACACGGTaGGCAGCCCCGCGCACGCCA +
Preference number: 4 (lower is better)
Translates to: EPSGLGGRRGTQLRPSLGGAGTR*AAPRTP
Trigger: TGGCGTGCGCGGGGCTGCTCACCGTGTGCCTGCTCC...TCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp AGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAGGGGCTCGGCTGCGGTTaGTGCCGACCCTGGACGCCG +
Preference number: 4 (lower is better)
Translates to: SLVAWEGDGAPSSGPASEGLGCG*CRPWTP
Trigger: CGGCGTCCAGGGTCGGCAGCAACCGCAGCCGAGCCC...CTCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp AGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAGCCGCTCGGGCTCGGCTaGGGTTGCTGCCGACCCTGG +
Preference number: 4 (lower is better)
Translates to: SLVAWEGDGAPSSGPASEPLGLG*GCCRPW
Trigger: CCAGGGTCGGCAGCAACCGCAGCCGAGCCCGAGCGG...CTCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp CTGACACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCTGCTCCCGCTCGGGCTCGGCTaGGGTTGCTGCCGACCCTGG +
Preference number: 4 (lower is better)
Translates to: LTLLRARRPARRLPQSLLPLGLG*GCCRPW
Trigger: CCAGGGTCGGCAGCAACCGCAGCCGAGCCCGAGCGG...GAGCAGGCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR TCA 90 bp GAGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAGGCGGCCAGATGGCCTaGGGCCCACCCAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: EPSGLGGRRGTQLRPSLGGGQMA*GPPRQG
Trigger: TCCCTGTCTGGGTGGGCCTCAGGCCATCTGGCCGCC...TCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp AGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAGGGCCTCCAGGGTATCTaGCGCCCCCTCCAGCGAGCT +
Preference number: 4 (lower is better)
Translates to: SLVAWEGDGAPSSGPASEGLQGI*RPLQRA
Trigger: AGCTCGCTGGAGGGGGCGTCAGATACCCTGGAGGCC...CTCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp GACCGGCTGACACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCAGGTGGATGACCGGCTaGCACTCCTCAGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: DRLTLLRARRPARRLPQSRWMTG*HSSGLG
Trigger: GCCGAGCCCTGAGGAGTGTCAGCCGGTCATCCACCT...GCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAGCCGGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000493590.1
CDS-3UTR CCA 90 bp GTGGATGACCGGCTGACACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGGCTGGGGTCCCAGCCTaGGGTTCAGAGGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VDDRLTLLRARRPARRLPAGVPA*GSEASG
Trigger: CCCAGAGGCCTCTGAACCCCAGGCTGGGACCCCAGC...CGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAGCCGGTCATCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR TCA 90 bp GAGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAGGAAGAACACAGTGGTaGGGGTGTCCGGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: EPSGLGGRRGTQLRPSLGGRTQW*GCPGPA
Trigger: TGCGGGCCCCGGACACCCTCACCACTGTGTTCTTCC...TCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GGTGAGGGTGTCCGGGGCCCGCAGGTGGTCGATGAGGATGCGCTGGAAGGCCTTGGTTGCTGCCGACCCTaGACGCCGCGGCGGACTCGG +
Preference number: 4 (lower is better)
Translates to: GEGVRGPQVVDEDALEGLGCCRP*TPRRTR
Trigger: CCGAGTCCGCCGCGGCGTCCAGGGTCGGCAGCAACC...AAGGCCTTCCAGCGCATCCTCATCGACCACCTGCGGGCCCCGGACACCCTCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp CGGCTGACACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCTGTGGAGGCGGTTCACCTaGAGCCGCCACTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: RLTLLRARRPARRLPQSLWRRFT*SRHCIS
Trigger: CGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCA...CAGGCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp GAGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAGCAGCTCCCCCAGGCTaGGAACCCCATCGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: EPSGLGGRRGTQLRPSLGAAPPG*EPHRQS
Trigger: ACTTTGCCGATGGGGTTCTCAGCCTGGGGGAGCTGC...TCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp CGGCTGCCGCAGAGCCTGCTCTGCGCCTCCACGCTCTCTGCATCTGACCGCCAGGGCCTCCAGGGTATCTaGCGCCCCCTCCAGCGAGCT +
Preference number: 4 (lower is better)
Translates to: RLPQSLLCASTLSASDRQGLQGI*RPLQRA
Trigger: AGCTCGCTGGAGGGGGCGTCAGATACCCTGGAGGCC...CTGGCGGTCAGATGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGGCAGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493590.1
CDS-3UTR TCA 90 bp GAGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGACTGCATCTCGGCCTCTaGGCTGCGCCCTGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: EPSGLGGRRGTQLRPSLGLHLGL*AAPCVR
Trigger: TCTGACACAGGGCGCAGCTCAGAGGCCGAGATGCAG...TCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp GGCCCCTGTGAAGTCCACATAGCAGCGCAGGGCTCGGTGGAAGTCCTGCAGGCCCCGCTCGGGCTCGGCTaGGGTTGCTGCCGACCCTGG +
Preference number: 4 (lower is better)
Translates to: GPCEVHIAAQGSVEVLQAPLGLG*GCCRPW
Trigger: CCAGGGTCGGCAGCAACCGCAGCCGAGCCCGAGCGG...GGCCTGCAGGACTTCCACCGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp GAGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAACCTGGAGCCGCCACTaGATCTCGGCCTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: EPSGLGGRRGTQLRPSLGTWSRH*ISASEL
Trigger: CAGCTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGT...TCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp CGGCTGACACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCTGTTGCTGCCAGGCGACTaGTGGTGCCTTCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RLTLLRARRPARRLPQSLLLPGD*WCLLQE
Trigger: CTCCTGGAGAAGGCACCAGCAGTCGCCTGGCAGCAA...CAGGCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp GAGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGATGCGCTGGAAGGCCTTaGTGCCAGGCGACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: EPSGLGGRRGTQLRPSLGCAGRP*CQATAG
Trigger: ACCAGCAGTCGCCTGGCAGCAAGGCCTTCCAGCGCA...TCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp TCCACGCTCTCTGCATCTGACCGCCAGCCATGGGCCTGGGCCTCCAGGGTATCTGGAGCAGGCACACGGTaGGCAGCCCCGCGCACGCCA +
Preference number: 4 (lower is better)
Translates to: STLSASDRQPWAWASRVSGAGTR*AAPRTP
Trigger: TGGCGTGCGCGGGGCTGCTCACCGTGTGCCTGCTCC...AGATACCCTGGAGGCCCAGGCCCATGGCTGGCGGTCAGATGCAGAGAGCGTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493590.1
CDS-3UTR GCA 90 bp AGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAGCCGCTGAACAGTTCCTaGAGCTCCCCCAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SLVAWEGDGAPSSGPASEPLNSS*SSPRLR
Trigger: TCTCAGCCTGGGGGAGCTGCAGGAACTGTTCAGCGG...CTCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp TTGCACTCGAGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACGTCCTGCCCGCCGGCTaGCGCAGAGCCTGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: LHSSWSMSSWRRFTWSRHVLPAG*RRACSA
Trigger: CGCAGAGCAGGCTCTGCGGCAGCCGGCGGGCAGGAC...GTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTGCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp CCATGGCAGCGAGCACTGCACGGTTCAGCGATTCCAATGCAGCCAGCACCGGCCGTCCTGCCCGCCGGCTaGCGCAGAGCCTGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: PWQRALHGSAIPMQPAPAVLPAG*RRACSA
Trigger: CGCAGAGCAGGCTCTGCGGCAGCCGGCGGGCAGGAC...GGCCGGTGCTGGCTGCATTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR GCA 90 bp GCTCTGGGCCCCTGTGAAGTCCACATAGCAGCGCAGGGCTCGGTGGAAGTCCTGGTCCTGCCCGCCGGCTaGCGCAGAGCCTGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: ALGPCEVHIAAQGSVEVLVLPAG*RRACSA
Trigger: CGCAGAGCAGGCTCTGCGGCAGCCGGCGGGCAGGAC...CAGGACTTCCACCGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp GAGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGATCTGCCACCTGGACCTaGCTCTGGGCCATGAGGATG +
Preference number: 4 (lower is better)
Translates to: EPSGLGGRRGTQLRPSLGSATWT*LWAMRM
Trigger: CATCCTCATGGCCCAGAGGCAGGTCCAGGTGGCAGA...TCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp CGGCTGACACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCTGACCTGGACCTGCCTCTaGGCCATGAGGATGTGCAAG +
Preference number: 4 (lower is better)
Translates to: RLTLLRARRPARRLPQSLTWTCL*AMRMCK
Trigger: CTTGCACATCCTCATGGCCCAGAGGCAGGTCCAGGT...CAGGCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GAGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGATCGATGAGGATGCGCTaGAAGGCCTTGCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: EPSGLGGRRGTQLRPSLGSMRMR*KALLPG
Trigger: GCCTGGCAGCAAGGCCTTCCAGCGCATCCTCATCGA...TCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp CAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGCAGAGCCTAGTGGCCTaGGAGGGCGACGGGGCACCC +
Preference number: 4 (lower is better)
Translates to: QEESRTLARRPDGLRPTQQSLVA*EGDGAP
Trigger: GGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTCTG...CTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GAGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGACAACCCAGAGGCCTCTaGCACATCCATGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: EPSGLGGRRGTQLRPSLGQPRGL*HIHGCW
Trigger: CCAGCACCCATGGATGTGCCAGAGGCCTCTGGGTTG...TCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGGGAGCAGGCACACGGTaGGCAGCCCCGCGCACGCCA +
Preference number: 4 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGGAGTR*AAPRTP
Trigger: TGGCGTGCGCGGGGCTGCTCACCGTGTGCCTGCTCC...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp GGTTCAGCGATTCCAATGCAGCCAGCACCGGCCGGTAGACACCCAGGTGCTCTGGGAGCAGGCACACGGTaGGCAGCCCCGCGCACGCCA +
Preference number: 4 (lower is better)
Translates to: GSAIPMQPAPAGRHPGALGAGTR*AAPRTP
Trigger: TGGCGTGCGCGGGGCTGCTCACCGTGTGCCTGCTCC...CAGAGCACCTGGGTGTCTACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR TCA 90 bp GTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTTCCAGCCGGGGGGGGGACCAGGTGGATaGCCGGCTGACACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VQVRPLGQVLFTQGFQPGGGPGG*PADTPQ
Trigger: CTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCC...CCCCGGCTGGAACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCAC
68% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR TCA 90 bp GTGTCCGGGGCCCGCAGGTGGTCGATGAGGATGCGCTGGAAGGCCTTGCTGCCAGCTTCTGCCGCTGGCTaGGGAGGAGCAGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VSGARRWSMRMRWKALLPASAAG*GGAEAW
Trigger: CCAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGC...TGGCAGCAAGGCCTTCCAGCGCATCCTCATCGACCACCTGCGGGCCCCGGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR GCA 90 bp ACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGAGGGAGGCTCGGCTGCGGTTGCTaGCGACCCTGGACGCCGCGG +
Preference number: 4 (lower is better)
Translates to: TSPGLCAGLASPEGSRGRLGCGC*RPWTPR
Trigger: CCGCGGCGTCCAGGGTCGGCAGCAACCGCAGCCGAG...CCTCCCTCTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp GACCGGCTGACACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCATGGCAGCGAGCACTaGACGGTTCAGCGATTCCAA +
Preference number: 4 (lower is better)
Translates to: DRLTLLRARRPARRLPQSHGSEH*TVQRFQ
Trigger: TTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATG...GCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAGCCGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000493590.1
CDS-3UTR GCA 90 bp GCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGTCCTGCCCGCCGGCTaGCGCAGAGCCTGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: ALPPGPSPGGDKSWSLRWVLPAG*RRACSA
Trigger: CGCAGAGCAGGCTCTGCGGCAGCCGGCGGGCAGGAC...CCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGGTCCTGCCCGCCGGCTaGCGCAGAGCCTGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGVLPAG*RRACSA
Trigger: CGCAGAGCAGGCTCTGCGGCAGCCGGCGGGCAGGAC...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp GTGGATGACCGGCTGACACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGTTCTGGGCGGACACATaGAGACAATGGCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VDDRLTLLRARRPARRLPFWADT*RQWLWA
Trigger: GGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAA...CGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAGCCGGTCATCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp TGGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCGGTTGCTGCCGACCCTaGACGCCGCGGCGGACTCGG +
Preference number: 4 (lower is better)
Translates to: WAESPSTRPKSRRRQVLVGCCRP*TPRRTR
Trigger: CCGAGTCCGCCGCGGCGTCCAGGGTCGGCAGCAACC...GACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp CGGCTGACACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCTGAAGCGCGTCACAAACTaGTCCACTTTGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RLTLLRARRPARRLPQSLKRVTN*STLEAL
Trigger: GAGGGCCTCCAAAGTGGACCAGTTTGTGACGCGCTT...CAGGCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000493590.1
CDS-3UTR CCA 90 bp CGGCTGACACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCTGTGCAGACAATGGCTCTaGGCCCCTGTGAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: RLTLLRARRPARRLPQSLCRQWL*APVKST
Trigger: TGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCA...CAGGCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GGCCCCTGTGAAGTCCACATAGCAGCGCAGGGCTCGGTGGAAGTCCTGCAGGCCTCCGGGGCCCGCAGGTaGTCGATGAGGATGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GPCEVHIAAQGSVEVLQASGARR*SMRMRW
Trigger: CCAGCGCATCCTCATCGACCACCTGCGGGCCCCGGA...GGCCTGCAGGACTTCCACCGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp TGGAGCCGCCACTGCATCTCGGCCTCTGAGCTGCGCCCTGTGTCAGAAGAGCCGTCCGGGGCCCGCAGGTaGTCGATGAGGATGCGCTGG +
Preference number: 4 (lower is better)
Translates to: WSRHCISASELRPVSEEPSGARR*SMRMRW
Trigger: CCAGCGCATCCTCATCGACCACCTGCGGGCCCCGGA...CGGCTCTTCTGACACAGGGCGCAGCTCAGAGGCCGAGATGCAGTGGCGGCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp AGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAGGGAGGAGCAGAAGCCTaGTCCCAAGACAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SLVAWEGDGAPSSGPASEGGAEA*SQDSRK
Trigger: CTTCCTGCTGTCTTGGGACCAGGCTTCTGCTCCTCC...CTCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp GGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGGGCGGCCAGATGGCCTaGGGCCCACCCAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: GGDKSWSLRWAGQSRRLQGGQMA*GPPRQG
Trigger: TCCCTGTCTGGGTGGGCCTCAGGCCATCTGGCCGCC...CTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp GCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGGCGGCCAGATGGCCTaGGGCCCACCCAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: AWSQDSRKKAGPSLGGQMGGQMA*GPPRQG
Trigger: TCCCTGTCTGGGTGGGCCTCAGGCCATCTGGCCGCC...CATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp CAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGGCTTCTGCCGCTGGCTaGGGAGGAGCAGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QEESRTLARRPDGLRPTQASAAG*GGAEAW
Trigger: CCAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGC...CTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp CTGACACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCTGCTCCATGGCAGCGAGCACTaGACGGTTCAGCGATTCCAA +
Preference number: 4 (lower is better)
Translates to: LTLLRARRPARRLPQSLLHGSEH*TVQRFQ
Trigger: TTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATG...GAGCAGGCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000493590.1
CDS-3UTR CCA 90 bp CGGCTGCCGCAGAGCCTGCTCTGCGCCTCCACGCTCTCTGCATCTGACCGCCAGGCTTGGTGGCATCCATaGCAGCGAGCACTGCACGGT +
Preference number: 4 (lower is better)
Translates to: RLPQSLLCASTLSASDRQAWWHP*QRALHG
Trigger: ACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGC...CTGGCGGTCAGATGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGGCAGCCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493590.1
CDS-3UTR CCA 90 bp AGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAGTCTCGTACTCCAGCTTaGTGGCATCCATGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SLVAWEGDGAPSSGPASESRTPA*WHPWQR
Trigger: TCGCTGCCATGGATGCCACCAAGCTGGAGTACGAGA...CTCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GAGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAAAGCGCGTCACAAACTaGTCCACTTTGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: EPSGLGGRRGTQLRPSLGKRVTN*STLEAL
Trigger: GAGGGCCTCCAAAGTGGACCAGTTTGTGACGCGCTT...TCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp CACTCGAGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCCGCCAGCCATGGGCCTaGGCCTCCAGGGTATCTGAC +
Preference number: 4 (lower is better)
Translates to: HSSWSMSSWRRFTWSRHCRQPWA*ASRVSD
Trigger: GTCAGATACCCTGGAGGCCCAGGCCCATGGCTGGCG...GCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp AGCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGAGGGTCCTCCCTTGTaGGGCCCTGGCCCCACGGCC +
Preference number: 4 (lower is better)
Translates to: SLVPRQQEESRTLARRPDEGPPL*GPGPTA
Trigger: GGCCGTGGGGCCAGGGCCCCACAAGGGAGGACCCTC...ATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246190.11
CDS-3UTR CCA 90 bp CACTCGAGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCCAGCGCAGGGCTCGGTaGAAGTCCTGCAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: HSSWSMSSWRRFTWSRHCQRRAR*KSCRPS
Trigger: GGAAGGCCTGCAGGACTTCCACCGAGCCCTGCGCTG...GCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp GCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGCAGAGCCTAGTGGCCTaGGAGGGCGACGGGGCACCC +
Preference number: 4 (lower is better)
Translates to: AWSQDSRKKAGPSLGGQMQSLVA*EGDGAP
Trigger: GGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTCTG...CATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp TGGTCGATGAGGATGCGCTGGAAGGCCTTGCTGCCAGGCGACTGCTGGTGCCTTCAGAGCCTAGTGGCCTaGGAGGGCGACGGGGCACCC +
Preference number: 4 (lower is better)
Translates to: WSMRMRWKALLPGDCWCLQSLVA*EGDGAP
Trigger: GGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTCTG...AAGGCACCAGCAGTCGCCTGGCAGCAAGGCCTTCCAGCGCATCCTCATCGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCGCGGCGGACTCGGTGTaGCTAGAGGCCGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: QEETSPGLCAGLASPEGSAADSV*LEAAPW
Trigger: CCAAGGGGCGGCCTCTAGCCACACCGAGTCCGCCGC...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375238.8
CDS-3UTR TCA 90 bp AGGGTGAAGGAGGCACCGTCCAGCATCTTCTGGGCGGACACATGCAGACAATGGGGAGCAGGCACACGGTaGGCAGCCCCGCGCACGCCA +
Preference number: 4 (lower is better)
Translates to: RVKEAPSSIFWADTCRQWGAGTR*AAPRTP
Trigger: TGGCGTGCGCGGGGCTGCTCACCGTGTGCCTGCTCC...CCATTGTCTGCATGTGTCCGCCCAGAAGATGCTGGACGGTGCCTCCTTCACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp GGCCTTGCACTCGAGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGGCAGCTCCCCCAGGCTaGGAACCCCATCGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: GLALELVDELLEAVHLEPAAPPG*EPHRQS
Trigger: ACTTTGCCGATGGGGTTCTCAGCCTGGGGGAGCTGC...CGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTGCAAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR TCA 90 bp GGGCCTGGGCCTCCAGGGTATCTGACGCCCCCTCCAGCGAGCTCTGAAGGGCTTGCCCATCAATGCCGCTaGACAGTTCCTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GPGPPGYLTPPPASSEGLAHQCR*TVPAAP
Trigger: GGGAGCTGCAGGAACTGTTCAGCGGCATTGATGGGC...AAGCCCTTCAGAGCTCGCTGGAGGGGGCGTCAGATACCCTGGAGGCCCAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR TCA 90 bp GCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGGCCTCCAGGGTATCTaGCGCCCCCTCCAGCGAGCT +
Preference number: 4 (lower is better)
Translates to: ALPPGPSPGGDKSWSLRWGLQGI*RPLQRA
Trigger: AGCTCGCTGGAGGGGGCGTCAGATACCCTGGAGGCC...CCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp GTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCGGCCTCCAGGGTATCTaGCGCCCCCTCCAGCGAGCT +
Preference number: 4 (lower is better)
Translates to: VQEETSPGLCAGLASPEGGLQGI*RPLQRA
Trigger: AGCTCGCTGGAGGGGGCGTCAGATACCCTGGAGGCC...GCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp GTCCCTGAGCATCAGCCCTGCTTCTGCCGCTGGCTGAGGAGGAGCAGAAGCCTGAGGTGGATGACCGGCTaGCACTCCTCAGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: VPEHQPCFCRWLRRSRSLRWMTG*HSSGLG
Trigger: GCCGAGCCCTGAGGAGTGTCAGCCGGTCATCCACCT...CAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp CCATGGCAGCGAGCACTGCACGGTTCAGCGATTCCAATGCAGCCAGCACCGGCCAGGTGGATGACCGGCTaGCACTCCTCAGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: PWQRALHGSAIPMQPAPARWMTG*HSSGLG
Trigger: GCCGAGCCCTGAGGAGTGTCAGCCGGTCATCCACCT...GGCCGGTGCTGGCTGCATTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR TCA 90 bp GAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGACAGGGGGACCAGGTGGATaGCCGGCTGACACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: EESRTLARRPDGLRPTQTGGPGG*PADTPQ
Trigger: CTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCC...TGTCTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp ATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGCCTCTGAGGGGGGACCAGGTGGATaGCCGGCTGACACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: MSSWRRFTWSRHCISASEGGPGG*PADTPQ
Trigger: CTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCC...CTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCAT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR TCA 90 bp CAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGGGCTCTGGGCCCCTGTaGAGTCCACATAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: QEESRTLARRPDGLRPTQGSGPL*SPHSSA
Trigger: TGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCC...CTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp GAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGACACCCGCAGGTGGTCGATaGGGATGCGCTGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: EESRTLARRPDGLRPTQTPAGGR*GCAGRP
Trigger: AGGCCTTCCAGCGCATCCTCATCGACCACCTGCGGG...TGTCTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp CACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCCCGCAGAGCCTGCTCTaGGCCTCCACGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: HQAQVQEETSPGLCAGLAPQSLL*ASTLSA
Trigger: TGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGG...GGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp GTCCCTGAGCATCAGCCCTGCTTCTGCCGCTGGCTGAGGAGGAGCAGAAGCCTGCCGCAGAGCCTGCTCTaGGCCTCCACGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VPEHQPCFCRWLRRSRSLPQSLL*ASTLSA
Trigger: TGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGG...CAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp GTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTTCCAGCCGGGGTCTGCCACCTGGACCTaGCTCTGGGCCATGAGGATG +
Preference number: 4 (lower is better)
Translates to: VQVRPLGQVLFTQGFQPGSATWT*LWAMRM
Trigger: CATCCTCATGGCCCAGAGGCAGGTCCAGGTGGCAGA...CCCCGGCTGGAACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp GAGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGATGGCACATCCATGGGTaGTGGAAGAGTCAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: EPSGLGGRRGTQLRPSLGWHIHG*WKSQSL
Trigger: TAGGCTCTGACTCTTCCAGCACCCATGGATGTGCCA...TCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GGTGAGGGTGTCCGGGGCCCGCAGGTGGTCGATGAGGATGCGCTGGAAGGCCTTGCTTGGTGGCATCCATaGCAGCGAGCACTGCACGGT +
Preference number: 4 (lower is better)
Translates to: GEGVRGPQVVDEDALEGLAWWHP*QRALHG
Trigger: ACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGC...AAGGCCTTCCAGCGCATCCTCATCGACCACCTGCGGGCCCCGGACACCCTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GTCCCTGAGCATCAGCCCTGCTTCTGCCGCTGGCTGAGGAGGAGCAGAAGCCTGCGCCAGCCATGGGCCTaGGCCTCCAGGGTATCTGAC +
Preference number: 4 (lower is better)
Translates to: VPEHQPCFCRWLRRSRSLRQPWA*ASRVSD
Trigger: GTCAGATACCCTGGAGGCCCAGGCCCATGGCTGGCG...CAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp CCATGGCAGCGAGCACTGCACGGTTCAGCGATTCCAATGCAGCCAGCACCGGCCCGCCAGCCATGGGCCTaGGCCTCCAGGGTATCTGAC +
Preference number: 4 (lower is better)
Translates to: PWQRALHGSAIPMQPAPARQPWA*ASRVSD
Trigger: GTCAGATACCCTGGAGGCCCAGGCCCATGGCTGGCG...GGCCGGTGCTGGCTGCATTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR CCA 90 bp GTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCGGGGCCCGCAGGTaGTCGATGAGGATGCGCTGG +
Preference number: 4 (lower is better)
Translates to: VQEETSPGLCAGLASPEGSGARR*SMRMRW
Trigger: CCAGCGCATCCTCATCGACCACCTGCGGGCCCCGGA...GCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTTCCAGCCGGGGGTCTTTGCGCTGGGCTaGCCAGTCCAGAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VQVRPLGQVLFTQGFQPGVFALG*PVQKAP
Trigger: TGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGAC...CCCCGGCTGGAACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGGCTGGGGTCCCAGCCTaGGGTTCAGAGGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GGDKSWSLRWAGQSRRLQAGVPA*GSEASG
Trigger: CCCAGAGGCCTCTGAACCCCAGGCTGGGACCCCAGC...CTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp TGGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCGCTGGGGTCCCAGCCTaGGGTTCAGAGGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: WAESPSTRPKSRRRQVLVAGVPA*GSEASG
Trigger: CCCAGAGGCCTCTGAACCCCAGGCTGGGACCCCAGC...GACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GAGCCGGGGGACCAGGTGGATGACCGGCTGACACTCCTCAGGGCTCGGCGTCCTTTATTGCCTCTGTGCTaGGGTCCCAGCCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: EPGDQVDDRLTLLRARRPLLPLC*GPSLGF
Trigger: GAACCCCAGGCTGGGACCCCAGCACAGAGGCAATAA...AGGACGCCGAGCCCTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCCGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp GTGTCCGGGGCCCGCAGGTGGTCGATGAGGATGCGCTGGAAGGCCTTGCTGCCAGCCTTGCACTCGAGCTaGTCGATGAGCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VSGARRWSMRMRWKALLPALHSS*SMSSWR
Trigger: CCTCCAGGAGCTCATCGACCAGCTCGAGTGCAAGGC...TGGCAGCAAGGCCTTCCAGCGCATCCTCATCGACCACCTGCGGGCCCCGGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
3UTR CAA 72 bp TGCCTCTGGGCCATGAGGATGTGCAAGTCAGGCCCCTaGGCCAGGTCCTCTTCACGCAGGGGTTCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: CLWAMRMCKSGP*ARSSSRRGSSR
Trigger: CCGGCTGGAACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCAGAGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR TCA 90 bp GTGTCAGAAGAGCCGGGGGACCAGGTGGATGACCGGCTGACACTCCTCAGGGCTGCAGCTCCCCCAGGCTaGGAACCCCATCGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: VSEEPGDQVDDRLTLLRAAAPPG*EPHRQS
Trigger: ACTTTGCCGATGGGGTTCTCAGCCTGGGGGAGCTGC...AGCCCTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCCGGCTCTTCTGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000493590.1
CDS-3UTR TCA 90 bp CACTCGAGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCGCCCATCAATGCCGCTaGACAGTTCCTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: HSSWSMSSWRRFTWSRHCAHQCR*TVPAAP
Trigger: GGGAGCTGCAGGAACTGTTCAGCGGCATTGATGGGC...GCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR TCA 90 bp GACCGGCTGACACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCTTTCTAAATTGTCGGTaGGATGCCCATCAATGCCGC +
Preference number: 4 (lower is better)
Translates to: DRLTLLRARRPARRLPQSFLNCR*DAHQCR
Trigger: GCGGCATTGATGGGCATCTCACCGACAATTTAGAAA...GCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAGCCGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000493590.1
CDS-3UTR TCA 90 bp GCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAAGGTGGATGACCGGCTaGCACTCCTCAGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: AQVQEETSPGLCAGLASPRWMTG*HSSGLG
Trigger: GCCGAGCCCTGAGGAGTGTCAGCCGGTCATCCACCT...TGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp CACTGCACGGTTCAGCGATTCCAATGCAGCCAGCACCGGCCGGTAGACACCCAGAGGTGGATGACCGGCTaGCACTCCTCAGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: HCTVQRFQCSQHRPVDTQRWMTG*HSSGLG
Trigger: GCCGAGCCCTGAGGAGTGTCAGCCGGTCATCCACCT...CTGGGTGTCTACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAACCGTGCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR TCA 90 bp CCTCTGGGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGAGGTGGATGACCGGCTaGCACTCCTCAGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: PLGHEDVQVRPLGQVLFTRWMTG*HSSGLG
Trigger: GCCGAGCCCTGAGGAGTGTCAGCCGGTCATCCACCT...CGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR TCA 90 bp GTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCGGGGGACCAGGTGGATaGCCGGCTGACACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VQEETSPGLCAGLASPEGGGPGG*PADTPQ
Trigger: CTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCC...GCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp ACGGTTCAGCGATTCCAATGCAGCCAGCACCGGCCGGTAGACACCCAGGTGCTCGGGGGACCAGGTGGATaGCCGGCTGACACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TVQRFQCSQHRPVDTQVLGGPGG*PADTPQ
Trigger: CTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCC...GAGCACCTGGGTGTCTACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAACCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR TCA 90 bp GAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGACACTGCATCTCGGCCTCTaGGCTGCGCCCTGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: EESRTLARRPDGLRPTQTLHLGL*AAPCVR
Trigger: TCTGACACAGGGCGCAGCTCAGAGGCCGAGATGCAG...TGTCTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp TTGCACTCGAGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACCTGCATCTCGGCCTCTaGGCTGCGCCCTGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: LHSSWSMSSWRRFTWSRHLHLGL*AAPCVR
Trigger: TCTGACACAGGGCGCAGCTCAGAGGCCGAGATGCAG...GTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR TCA 90 bp ACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGAGGGAGGCCCGCAGGTGGTCGATaGGGATGCGCTGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: TSPGLCAGLASPEGSRGRPAGGR*GCAGRP
Trigger: AGGCCTTCCAGCGCATCCTCATCGACCACCTGCGGG...CCTCCCTCTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp ATGGCTCTGGGCCCCTGTGAAGTCCACATAGCAGCGCAGGGCTCGGTGGAAGTCCCCGCAGGTGGTCGATaGGGATGCGCTGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: MALGPCEVHIAAQGSVEVPAGGR*GCAGRP
Trigger: AGGCCTTCCAGCGCATCCTCATCGACCACCTGCGGG...GACTTCCACCGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCGGAAGAACACAGTGGTaGGGGTGTCCGGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: QEETSPGLCAGLASPEGSGRTQW*GCPGPA
Trigger: TGCGGGCCCCGGACACCCTCACCACTGTGTTCTTCC...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp GGTTCAGCGATTCCAATGCAGCCAGCACCGGCCGGTAGACACCCAGGTGCTCTGGGAAGAACACAGTGGTaGGGGTGTCCGGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: GSAIPMQPAPAGRHPGALGRTQW*GCPGPA
Trigger: TGCGGGCCCCGGACACCCTCACCACTGTGTTCTTCC...CAGAGCACCTGGGTGTCTACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR TCA 90 bp GCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCTTCTGCCGCTGGCTaGGGAGGAGCAGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AWSQDSRKKAGPSLGGQMASAAG*GGAEAW
Trigger: CCAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGC...CATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp CTTCTGGGCGGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACATACTCGGCTGCGGTTGCTaGCGACCCTGGACGCCGCGG +
Preference number: 4 (lower is better)
Translates to: LLGGHMQTMALGPCEVHILGCGC*RPWTPR
Trigger: CCGCGGCGTCCAGGGTCGGCAGCAACCGCAGCCGAG...TATGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp GGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGCCGCAGAGCCTGCTCTaGGCCTCCACGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GGDKSWSLRWAGQSRRLQPQSLL*ASTLSA
Trigger: TGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGG...CTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp AGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGACCTGGAGCCGCCACTaGATCTCGGCCTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: SWSMSSWRRFTWSRHCISTWSRH*ISASEL
Trigger: CAGCTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGT...CGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp GGCCTTGCACTCGAGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGTCTGCCACCTGGACCTaGCTCTGGGCCATGAGGATG +
Preference number: 4 (lower is better)
Translates to: GLALELVDELLEAVHLEPSATWT*LWAMRM
Trigger: CATCCTCATGGCCCAGAGGCAGGTCCAGGTGGCAGA...CGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTGCAAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp GTCCCTGAGCATCAGCCCTGCTTCTGCCGCTGGCTGAGGAGGAGCAGAAGCCTGCTGCAGGCCTTCCTCTaGCACCTGGACCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VPEHQPCFCRWLRRSRSLLQAFL*HLDLPL
Trigger: CAGAGGCAGGTCCAGGTGGCAGAGGAAGGCCTGCAG...CAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp GTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTTCCAGCCGGGGTTCTGGGCGGACACATaGAGACAATGGCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VQVRPLGQVLFTQGFQPGFWADT*RQWLWA
Trigger: GGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAA...CCCCGGCTGGAACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp GGCCCCTGTGAAGTCCACATAGCAGCGCAGGGCTCGGTGGAAGTCCTGCAGGCCTTGCTGCCAGGCGACTaGTGGTGCCTTCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GPCEVHIAAQGSVEVLQALLPGD*WCLLQE
Trigger: CTCCTGGAGAAGGCACCAGCAGTCGCCTGGCAGCAA...GGCCTGCAGGACTTCCACCGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp CCGCCCGAAAATGCAGGCTCCAGGATGCTGGGACTGTGGGGATTTGGAATGGGGCCGCCATGGCTACCCTaGCATGGCTTCCCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: PPENAGSRMLGLWGFGMGPPWLP*HGFPAR
Trigger: TCGGGCGGGGAAGCCATGGCAGGGTAGCCATGGCGG...CCCCATTCCAAATCCCCACAGTCCCAGCATCCTGGAGCCTGCATTTTCGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp GTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGCCTCGCTTGGTGGCATCCATaGCAGCGAGCACTGCACGGT +
Preference number: 4 (lower is better)
Translates to: VDELLEAVHLEPPLHLGLAWWHP*QRALHG
Trigger: ACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGC...GAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp GCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGCGCCAGCCATGGGCCTaGGCCTCCAGGGTATCTGAC +
Preference number: 4 (lower is better)
Translates to: AWSQDSRKKAGPSLGGQMRQPWA*ASRVSD
Trigger: GTCAGATACCCTGGAGGCCCAGGCCCATGGCTGGCG...CATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GTCCCTGAGCATCAGCCCTGCTTCTGCCGCTGGCTGAGGAGGAGCAGAAGCCTGTGGAGGCGGTTCACCTaGAGCCGCCACTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: VPEHQPCFCRWLRRSRSLWRRFT*SRHCIS
Trigger: CGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCA...CAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGGCCGGGCCTCCAGCATaGGCCTGGCTCTGGTGGATA +
Preference number: 4 (lower is better)
Translates to: GGDKSWSLRWAGQSRRLQAGPPA*AWLWWI
Trigger: TATCCACCAGAGCCAGGCCCATGCTGGAGGCCCGGC...CTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246190.11
CDS-3UTR CCA 90 bp GGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTCAGCGCAGGGCTCGGTaGAAGTCCTGCAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GLRALPPGPSPGGDKSWSQRRAR*KSCRPS
Trigger: GGAAGGCCTGCAGGACTTCCACCGAGCCCTGCGCTG...AGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp CGGGGCCCGCAGGTGGTCGATGAGGATGCGCTGGAAGGCCTTGCTGCCAGGCGACCGTCCAGCATCTTCTaGGCGGACACATGCAGACAA +
Preference number: 4 (lower is better)
Translates to: RGPQVVDEDALEGLAARRPSSIF*ADTCRQ
Trigger: TTGTCTGCATGTGTCCGCCCAGAAGATGCTGGACGG...TCGCCTGGCAGCAAGGCCTTCCAGCGCATCCTCATCGACCACCTGCGGGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp ACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGAGGGAGGCTGCCAGGCGACTGCTaGTGCCTTCTCCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: TSPGLCAGLASPEGSRGRLPGDC*CLLQEA
Trigger: GGCCTCCTGGAGAAGGCACCAGCAGTCGCCTGGCAG...CCTCCCTCTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCCTGCCAGGCGACTGCTaGTGCCTTCTCCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QEETSPGLCAGLASPEGSLPGDC*CLLQEA
Trigger: GGCCTCCTGGAGAAGGCACCAGCAGTCGCCTGGCAG...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp TGGTCGATGAGGATGCGCTGGAAGGCCTTGCTGCCAGGCGACTGCTGGTGCCTTCTGCCAGGCGACTGCTaGTGCCTTCTCCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: WSMRMRWKALLPGDCWCLLPGDC*CLLQEA
Trigger: GGCCTCCTGGAGAAGGCACCAGCAGTCGCCTGGCAG...AAGGCACCAGCAGTCGCCTGGCAGCAAGGCCTTCCAGCGCATCCTCATCGACCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp TGGAGCCGCCACTGCATCTCGGCCTCTGAGCTGCGCCCTGTGTCAGAAGAGCCGTCCTGGTCTTTGCGCTaGGCTGGCCAGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: WSRHCISASELRPVSEEPSWSLR*AGQSRR
Trigger: CCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGA...CGGCTCTTCTGACACAGGGCGCAGCTCAGAGGCCGAGATGCAGTGGCGGCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGCCTCGGAGGAGACAAGTCCTaGTCTTTGCGCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VDELLEAVHLEPPLHLGLGGDKS*SLRWAG
Trigger: GCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCC...GAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GAACACAGTGGTGAGGGTGTCCGGGGCCCGCAGGTGGTCGATGAGGATGCGCTGCAACCCAGAGGCCTCTaGCACATCCATGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: EHSGEGVRGPQVVDEDALQPRGL*HIHGCW
Trigger: CCAGCACCCATGGATGTGCCAGAGGCCTCTGGGTTG...CAGCGCATCCTCATCGACCACCTGCGGGCCCCGGACACCCTCACCACTGTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp GGCCCCTGTGAAGTCCACATAGCAGCGCAGGGCTCGGTGGAAGTCCTGCAGGCCGCCTTGCACTCGAGCTaGTCGATGAGCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GPCEVHIAAQGSVEVLQAALHSS*SMSSWR
Trigger: CCTCCAGGAGCTCATCGACCAGCTCGAGTGCAAGGC...GGCCTGCAGGACTTCCACCGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR TCA 90 bp GCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGCTGCATCTCGGCCTCTaGGCTGCGCCCTGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: ALPPGPSPGGDKSWSLRWLHLGL*AAPCVR
Trigger: TCTGACACAGGGCGCAGCTCAGAGGCCGAGATGCAG...CCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCCCTGCCTCTGGGCCATaGGGATGTGCAAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QEETSPGLCAGLASPEGSPASGP*GCASQA
Trigger: GGCCTGACTTGCACATCCTCATGGCCCAGAGGCAGG...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp CTCTGGGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCCCTGCCTCTGGGCCATaGGGATGTGCAAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LWAMRMCKSGPLARSSSRPASGP*GCASQA
Trigger: GGCCTGACTTGCACATCCTCATGGCCCAGAGGCAGG...GCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR TCA 90 bp GGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTGGCTCTGGGCCCCTGTaGAGTCCACATAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: GLRALPPGPSPGGDKSWSGSGPL*SPHSSA
Trigger: TGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCC...AGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp CCTCTGGGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGGGCTCTGGGCCCCTGTaGAGTCCACATAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: PLGHEDVQVRPLGQVLFTGSGPL*SPHSSA
Trigger: TGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCC...CGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp CACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCCCGCTGAACAGTTCCTaGAGCTCCCCCAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: HQAQVQEETSPGLCAGLAPLNSS*SSPRLR
Trigger: TCTCAGCCTGGGGGAGCTGCAGGAACTGTTCAGCGG...GGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp GCTCTGGGCCCCTGTGAAGTCCACATAGCAGCGCAGGGCTCGGTGGAAGTCCTGCCGCTGAACAGTTCCTaGAGCTCCCCCAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ALGPCEVHIAAQGSVEVLPLNSS*SSPRLR
Trigger: TCTCAGCCTGGGGGAGCTGCAGGAACTGTTCAGCGG...CAGGACTTCCACCGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp GTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGCCTCGTTCAGCGATTCCAATaGAGCCAGCACCGGCCGGTA +
Preference number: 4 (lower is better)
Translates to: VDELLEAVHLEPPLHLGLVQRFQ*SQHRPV
Trigger: TACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAAC...GAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGAC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp GCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGCCTCTGAGCTGCCATGGCAGCGAGCACTaGACGGTTCAGCGATTCCAA +
Preference number: 4 (lower is better)
Translates to: APGGGSPGAATASRPLSCHGSEH*TVQRFQ
Trigger: TTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATG...GCAGCTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp CACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCTCTCGGCCTCTGAGCTaGGCCCTGTGTCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: HQAQVQEETSPGLCAGLASRPLS*ALCQKS
Trigger: GCTCTTCTGACACAGGGCGCAGCTCAGAGGCCGAGA...GGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp GTGTCAGAAGAGCCGGGGGACCAGGTGGATGACCGGCTGACACTCCTCAGGGCTTCTCGGCCTCTGAGCTaGGCCCTGTGTCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VSEEPGDQVDDRLTLLRASRPLS*ALCQKS
Trigger: GCTCTTCTGACACAGGGCGCAGCTCAGAGGCCGAGA...AGCCCTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCCGGCTCTTCTGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp GCTCTGGGCCCCTGTGAAGTCCACATAGCAGCGCAGGGCTCGGTGGAAGTCCTGTCTCGGCCTCTGAGCTaGGCCCTGTGTCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: ALGPCEVHIAAQGSVEVLSRPLS*ALCQKS
Trigger: GCTCTTCTGACACAGGGCGCAGCTCAGAGGCCGAGA...CAGGACTTCCACCGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp CCTCTGGGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGACCTGGAGCCGCCACTaGATCTCGGCCTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: PLGHEDVQVRPLGQVLFTTWSRH*ISASEL
Trigger: CAGCTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGT...CGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp GCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGCTGCAGGCCTTCCTCTaGCACCTGGACCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AWSQDSRKKAGPSLGGQMLQAFL*HLDLPL
Trigger: CAGAGGCAGGTCCAGGTGGCAGAGGAAGGCCTGCAG...CATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp GGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTGCGCTGGAAGGCCTTaGTGCCAGGCGACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GLRALPPGPSPGGDKSWSCAGRP*CQATAG
Trigger: ACCAGCAGTCGCCTGGCAGCAAGGCCTTCCAGCGCA...AGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCGGGGCCCTCGGCGTGTaGAGGTCTGGCTCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: QEETSPGLCAGLASPEGSGALGV*RSGSVV
Trigger: AACAACTGAGCCAGACCTGCACACGCCGAGGGCCCC...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp GCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTGGGGCCCTCGGCGTGTaGAGGTCTGGCTCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: AMRMCKSGPLARSSSRRGGALGV*RSGSVV
Trigger: AACAACTGAGCCAGACCTGCACACGCCGAGGGCCCC...ACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp GCCCTCTCGTACTCCAGCTTGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCGGGGCCCTCGGCGTGTaGAGGTCTGGCTCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: ALSYSSLVASMAASTARFGALGV*RSGSVV
Trigger: AACAACTGAGCCAGACCTGCACACGCCGAGGGCCCC...GAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGAGTACGAGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR GCA 90 bp CACTCGAGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCACAAGTCCTGGTCTTTaGGCTGGGCTGGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: HSSWSMSSWRRFTWSRHCTSPGL*AGLASP
Trigger: TGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT...GCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp TGGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCCCTGAGCATCAGCCCTaGTTCTGCCGCTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: WAESPSTRPKSRRRQVLVPEHQP*FCRWLR
Trigger: CCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGG...GACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp ACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGAGGGAGGCCTGAGCATCAGCCCTaGTTCTGCCGCTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TSPGLCAGLASPEGSRGRPEHQP*FCRWLR
Trigger: CCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGG...CCTCCCTCTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp CTGACACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCTGCTCGGTGGGATGAGGGCATaGAAACGATATGCAAATGAC +
Preference number: 4 (lower is better)
Translates to: LTLLRARRPARRLPQSLLGGMRA*KRYAND
Trigger: GTCATTTGCATATCGTTTGCATGCCCTCATCCCACC...GAGCAGGCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp GTCCCTGAGCATCAGCCCTGCTTCTGCCGCTGGCTGAGGAGGAGCAGAAGCCTGCTGCGGAAAACGTCCTaGAAGAGCGTGTGTCCGGCG +
Preference number: 4 (lower is better)
Translates to: VPEHQPCFCRWLRRSRSLLRKTS*KSVCPA
Trigger: CGCCGGACACACGCTCTTCCAGGACGTTTTCCGCAG...CAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGCCTCCGTACTCCAGCTTGGTaGCATCCATGGCAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: VDELLEAVHLEPPLHLGLRTPAW*HPWQRA
Trigger: TGCTCGCTGCCATGGATGCCACCAAGCTGGAGTACG...GAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGAC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp GCCTGCTCTGCGCCTCCACGCTCTCTGCATCTGACCGCCAGCCATGGGCCTGGGCAAACTGGTCCACTTTaGAGGCCCTCTCGTACTCCA +
Preference number: 4 (lower is better)
Translates to: ACSAPPRSLHLTASHGPGQTGPL*RPSRTP
Trigger: TGGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTG...CCCAGGCCCATGGCTGGCGGTCAGATGCAGAGAGCGTGGAGGCGCAGAGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493590.1
CDS-3UTR CCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCTGGAGGCGGTTCACCTaGAGCCGCCACTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: QEETSPGLCAGLASPEGSWRRFT*SRHCIS
Trigger: CGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCA...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTTGGAGGCGGTTCACCTaGAGCCGCCACTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: AMRMCKSGPLARSSSRRGWRRFT*SRHCIS
Trigger: CGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCA...ACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp CCTCTGGGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGTGGAGGCGGTTCACCTaGAGCCGCCACTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: PLGHEDVQVRPLGQVLFTWRRFT*SRHCIS
Trigger: CGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCA...CGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp GCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCACCTTCCTCTGCCACCTaGACCTGCCTCTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: AQVQEETSPGLCAGLASPPSSAT*TCLWAM
Trigger: CATGGCCCAGAGGCAGGTCCAGGTGGCAGAGGAAGG...TGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp ACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGAGGGAGGCCTTCCTCTGCCACCTaGACCTGCCTCTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: TSPGLCAGLASPEGSRGRPSSAT*TCLWAM
Trigger: CATGGCCCAGAGGCAGGTCCAGGTGGCAGAGGAAGG...CCTCCCTCTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp CTCTGGGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCCCTTCCTCTGCCACCTaGACCTGCCTCTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: LWAMRMCKSGPLARSSSRPSSAT*TCLWAM
Trigger: CATGGCCCAGAGGCAGGTCCAGGTGGCAGAGGAAGG...GCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp GTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCCCAGTCCCTGATCCCTaGGCTGAGAGCCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: VQEETSPGLCAGLASPEGPVPDP*AESPST
Trigger: GGTGGAAGGGCTCTCAGCCCAGGGATCAGGGACTGG...GCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCCCCTGCTTCTGCCGCTaGCTGAGGAGGAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: QEETSPGLCAGLASPEGSPCFCR*LRRSRS
Trigger: GCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGG...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGACAGCCTTGCACTCGAGCTaGTCGATGAGCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: EESRTLARRPDGLRPTQTALHSS*SMSSWR
Trigger: CCTCCAGGAGCTCATCGACCAGCTCGAGTGCAAGGC...TGTCTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGCCTCCATTTCACCCCGCCATaGCTACCCTGCCATGGCTTC +
Preference number: 4 (lower is better)
Translates to: VDELLEAVHLEPPLHLGLHFTPP*LPCHGF
Trigger: GAAGCCATGGCAGGGTAGCCATGGCGGGGTGAAATG...GAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp ATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGCCTCTGAGCGGGATAAGCCTGGGTaGGGAAGACAAGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: MSSWRRFTWSRHCISASERDKPG*GRQASW
Trigger: CCAGGAGGCTTGTCTTCCCCACCCAGGCTTATCCCG...CTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR TCA 90 bp AGCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGCAGCTCCCCCAGGCTaGGAACCCCATCGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SLVPRQQEESRTLARRPDAAPPG*EPHRQS
Trigger: ACTTTGCCGATGGGGTTCTCAGCCTGGGGGAGCTGC...ATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp GGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGGCCCATCAATGCCGCTaGACAGTTCCTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GGDKSWSLRWAGQSRRLQAHQCR*TVPAAP
Trigger: GGGAGCTGCAGGAACTGTTCAGCGGCATTGATGGGC...CTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp TGGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCGCCCATCAATGCCGCTaGACAGTTCCTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: WAESPSTRPKSRRRQVLVAHQCR*TVPAAP
Trigger: GGGAGCTGCAGGAACTGTTCAGCGGCATTGATGGGC...GACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp CCTCTGGGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGGCCCATCAATGCCGCTaGACAGTTCCTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PLGHEDVQVRPLGQVLFTAHQCR*TVPAAP
Trigger: GGGAGCTGCAGGAACTGTTCAGCGGCATTGATGGGC...CGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR TCA 90 bp CTTCTGGGCGGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACATAGGCCTCCAGGGTATCTaGCGCCCCCTCCAGCGAGCT +
Preference number: 4 (lower is better)
Translates to: LLGGHMQTMALGPCEVHIGLQGI*RPLQRA
Trigger: AGCTCGCTGGAGGGGGCGTCAGATACCCTGGAGGCC...TATGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR TCA 90 bp TGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCAGCGATTCCAATGCAGCCAGGGGGACCAGGTGGATaGCCGGCTGACACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: WWHPWQRALHGSAIPMQPGGPGG*PADTPQ
Trigger: CTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCC...TGGCTGCATTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR TCA 90 bp TCCTGCCAGAACTCATACAGGGTGAAGGAGGCACCGTCCAGCATCTTCTGGGCGCCCGCAGGTGGTCGATaGGGATGCGCTGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SCQNSYRVKEAPSSIFWAPAGGR*GCAGRP
Trigger: AGGCCTTCCAGCGCATCCTCATCGACCACCTGCGGG...CGCCCAGAAGATGCTGGACGGTGCCTCCTTCACCCTGTATGAGTTCTGGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp ACGGTTCAGCGATTCCAATGCAGCCAGCACCGGCCGGTAGACACCCAGGTGCTCCCGCTGAACAGTTCCTaGAGCTCCCCCAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: TVQRFQCSQHRPVDTQVLPLNSS*SSPRLR
Trigger: TCTCAGCCTGGGGGAGCTGCAGGAACTGTTCAGCGG...GAGCACCTGGGTGTCTACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAACCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR GCA 90 bp GTCCCTGAGCATCAGCCCTGCTTCTGCCGCTGGCTGAGGAGGAGCAGAAGCCTGGTTCAGCGATTCCAATaGAGCCAGCACCGGCCGGTA +
Preference number: 4 (lower is better)
Translates to: VPEHQPCFCRWLRRSRSLVQRFQ*SQHRPV
Trigger: TACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAAC...CAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp GGTGAAGGAGGCACCGTCCAGCATCTTCTGGGCGGACACATGCAGACAATGGCTCCGCAGAGCCTGCTCTaGGCCTCCACGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GEGGTVQHLLGGHMQTMAPQSLL*ASTLSA
Trigger: TGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGG...AGCCATTGTCTGCATGTGTCCGCCCAGAAGATGCTGGACGGTGCCTCCTTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp CTCCAGCTTGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCAGCGATTCCAACCGCAGAGCCTGCTCTaGGCCTCCACGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LQLGGIHGSEHCTVQRFQPQSLL*ASTLSA
Trigger: TGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGG...TTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR GCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCTCTCGGCCTCTGAGCTaGGCCCTGTGTCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QEETSPGLCAGLASPEGSSRPLS*ALCQKS
Trigger: GCTCTTCTGACACAGGGCGCAGCTCAGAGGCCGAGA...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp CTCCGAGGCCTAGCCCCAAAGCCAGTCTCATTTCACCCCGCCATGGCTACCCTGTCTCGGCCTCTGAGCTaGGCCCTGTGTCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LRGLAPKPVSFHPAMATLSRPLS*ALCQKS
Trigger: GCTCTTCTGACACAGGGCGCAGCTCAGAGGCCGAGA...CAGGGTAGCCATGGCGGGGTGAAATGAGACTGGCTTTGGGGCTAGGCCTCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR GCA 90 bp TGGGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGTCTGCCACCTGGACCTaGCTCTGGGCCATGAGGATG +
Preference number: 4 (lower is better)
Translates to: WAMRMCKSGPLARSSSRRSATWT*LWAMRM
Trigger: CATCCTCATGGCCCAGAGGCAGGTCCAGGTGGCAGA...CCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp CTCGTACTCCAGCTTGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCAGCGACTGCAGGCCTTCCTCTaGCACCTGGACCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LVLQLGGIHGSEHCTVQRLQAFL*HLDLPL
Trigger: CAGAGGCAGGTCCAGGTGGCAGAGGAAGGCCTGCAG...TCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGAGTACGAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR GCA 90 bp GAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGACATTCTGGGCGGACACATaGAGACAATGGCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: EESRTLARRPDGLRPTQTFWADT*RQWLWA
Trigger: GGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAA...TGTCTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp GTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTTGCTGCCAGGCGACTaGTGGTGCCTTCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VQEETSPGLCAGLASPEGLLPGD*WCLLQE
Trigger: CTCCTGGAGAAGGCACCAGCAGTCGCCTGGCAGCAA...GCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp GGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGCCTTTATTGCCTCTGTaGTGGGGTCCCAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GGDKSWSLRWAGQSRRLQPLLPL*WGPSLG
Trigger: CCCCAGGCTGGGACCCCAGCACAGAGGCAATAAAGG...CTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp GCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGCCTTTATTGCCTCTGTaGTGGGGTCCCAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: ALPPGPSPGGDKSWSLRWPLLPL*WGPSLG
Trigger: CCCCAGGCTGGGACCCCAGCACAGAGGCAATAAAGG...CCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp GGCTGGGAAGAACACAGTGGTGAGGGTGTCCGGGGCCCGCAGGTGGTCGATGAGATGCAGGCTCCAGGATaGTGGGACTGTGGGGATTTG +
Preference number: 4 (lower is better)
Translates to: GWEEHSGEGVRGPQVVDEMQAPG*WDCGDL
Trigger: CAAATCCCCACAGTCCCAGCATCCTGGAGCCTGCAT...CTCATCGACCACCTGCGGGCCCCGGACACCCTCACCACTGTGTTCTTCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp GCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGCTGCGGAAAACGTCCTaGAAGAGCGTGTGTCCGGCG +
Preference number: 4 (lower is better)
Translates to: AWSQDSRKKAGPSLGGQMLRKTS*KSVCPA
Trigger: CGCCGGACACACGCTCTTCCAGGACGTTTTCCGCAG...CATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGGCTTGGTGGCATCCATaGCAGCGAGCACTGCACGGT +
Preference number: 4 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGAWWHP*QRALHG
Trigger: ACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGC...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GGTGAAGGAGGCACCGTCCAGCATCTTCTGGGCGGACACATGCAGACAATGGCTCGCCAGCCATGGGCCTaGGCCTCCAGGGTATCTGAC +
Preference number: 4 (lower is better)
Translates to: GEGGTVQHLLGGHMQTMARQPWA*ASRVSD
Trigger: GTCAGATACCCTGGAGGCCCAGGCCCATGGCTGGCG...AGCCATTGTCTGCATGTGTCCGCCCAGAAGATGCTGGACGGTGCCTCCTTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp CTCCAGCTTGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCAGCGATTCCAACGCCAGCCATGGGCCTaGGCCTCCAGGGTATCTGAC +
Preference number: 4 (lower is better)
Translates to: LQLGGIHGSEHCTVQRFQRQPWA*ASRVSD
Trigger: GTCAGATACCCTGGAGGCCCAGGCCCATGGCTGGCG...TTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR CCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCTGGTCGATGAGCTCCTaGAGGCGGTTCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QEETSPGLCAGLASPEGSWSMSS*RRFTWS
Trigger: GCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCA...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCATGGTCGATGAGCTCCTaGAGGCGGTTCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AQVQEETSPGLCAGLASPWSMSS*RRFTWS
Trigger: GCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCA...TGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp TGGGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGTGGTCGATGAGCTCCTaGAGGCGGTTCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WAMRMCKSGPLARSSSRRWSMSS*RRFTWS
Trigger: GCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCA...CCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp GTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCCCTCCAGCATGGGCCTaGCTCTGGTGGATACCAGGA +
Preference number: 4 (lower is better)
Translates to: VQEETSPGLCAGLASPEGPPAWA*LWWIPG
Trigger: TCCTGGTATCCACCAGAGCCAGGCCCATGCTGGAGG...GCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246190.11
CDS-3UTR CCA 90 bp ACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGAGGGAGGGCAAGTCAGGCCCCTTaGCCAGGTCCTCTTCACGCA +
Preference number: 4 (lower is better)
Translates to: TSPGLCAGLASPEGSRGRASQAP*PGPLHA
Trigger: TGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGC...CCTCCCTCTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCAAGTCAGGCCCCTTaGCCAGGTCCTCTTCACGCA +
Preference number: 4 (lower is better)
Translates to: AWSQDSRKKAGPSLGGQMASQAP*PGPLHA
Trigger: TGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGC...CATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCGCAAGTCAGGCCCCTTaGCCAGGTCCTCTTCACGCA +
Preference number: 4 (lower is better)
Translates to: QEETSPGLCAGLASPEGSASQAP*PGPLHA
Trigger: TGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGC...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp TGGGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGCAAGTCAGGCCCCTTaGCCAGGTCCTCTTCACGCA +
Preference number: 4 (lower is better)
Translates to: WAMRMCKSGPLARSSSRRASQAP*PGPLHA
Trigger: TGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGC...CCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp GCTCTGGGCCCCTGTGAAGTCCACATAGCAGCGCAGGGCTCGGTGGAAGTCCTGACCTGGACCTGCCTCTaGGCCATGAGGATGTGCAAG +
Preference number: 4 (lower is better)
Translates to: ALGPCEVHIAAQGSVEVLTWTCL*AMRMCK
Trigger: CTTGCACATCCTCATGGCCCAGAGGCAGGTCCAGGT...CAGGACTTCCACCGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp CTCCAGCTTGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCAGCGATTCCAACAGCGCAGGGCTCGGTaGAAGTCCTGCAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LQLGGIHGSEHCTVQRFQQRRAR*KSCRPS
Trigger: GGAAGGCCTGCAGGACTTCCACCGAGCCCTGCGCTG...TTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGGTCTTTGCGCTGGGCTaGCCAGTCCAGAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGVFALG*PVQKAP
Trigger: TGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGAC...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp TGGGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGTCTTTGCGCTGGGCTaGCCAGTCCAGAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: WAMRMCKSGPLARSSSRRVFALG*PVQKAP
Trigger: TGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGAC...CCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGTCCTGGTCTTTGCGCTaGGCTGGCCAGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: ALPPGPSPGGDKSWSLRWSWSLR*AGQSRR
Trigger: CCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGA...CCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp ACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGAGGGAGGTCCTGGTCTTTGCGCTaGGCTGGCCAGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: TSPGLCAGLASPEGSRGRSWSLR*AGQSRR
Trigger: CCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGA...CCTCCCTCTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGGAGGAGACAAGTCCTaGTCTTTGCGCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AQVQEETSPGLCAGLASPGGDKS*SLRWAG
Trigger: GCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCC...TGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGGGAGGAGCAGAAGCCTaGTCCCAAGACAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GHEDVQVRPLGQVLFTQGGGAEA*SQDSRK
Trigger: CTTCCTGCTGTCTTGGGACCAGGCTTCTGCTCCTCC...CCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp AGCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATCCCTGCTTCTGCCGCTaGCTGAGGAGGAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SLVPRQQEESRTLARRPDPCFCR*LRRSRS
Trigger: GCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGG...ATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGACAGCAAGGTTTGAGGGTTaGGGGGTCCCTGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: EESRTLARRPDGLRPTQTARFEG*GVPEHQ
Trigger: CTGATGCTCAGGGACCCCCCAACCCTCAAACCTTGC...TGTCTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCCAACCCAGAGGCCTCTaGCACATCCATGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QEETSPGLCAGLASPEGSQPRGL*HIHGCW
Trigger: CCAGCACCCATGGATGTGCCAGAGGCCTCTGGGTTG...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp TGGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCGCCTTGCACTCGAGCTaGTCGATGAGCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: WAESPSTRPKSRRRQVLVALHSS*SMSSWR
Trigger: CCTCCAGGAGCTCATCGACCAGCTCGAGTGCAAGGC...GACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTTCCAGCCGGGGTGTGGGGATTTGGAATaGGGGTACAATGGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: VQVRPLGQVLFTQGFQPGCGDLE*GYNGRL
Trigger: CAAGCGCCCATTGTACCCCCATTCCAAATCCCCACA...CCCCGGCTGGAACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR TCA 90 bp CCTCTGAGCTGCGCCCTGTGTCAGAAGAGCCGGGGGACCAGGTGGATGACCGGCGACACCCAGGTGCTCTaGGAAGTAGTCACACAGTTT +
Preference number: 4 (lower is better)
Translates to: PLSCALCQKSRGTRWMTGDTQVL*EVVTQF
Trigger: AAACTGTGTGACTACTTCTCAGAGCACCTGGGTGTC...GCCGGTCATCCACCTGGTCCCCCGGCTCTTCTGACACAGGGCGCAGCTCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp TGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCAGCGATTCCAATGCAGCCACCTGCCTCTGGGCCATaGGGATGTGCAAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: WWHPWQRALHGSAIPMQPPASGP*GCASQA
Trigger: GGCCTGACTTGCACATCCTCATGGCCCAGAGGCAGG...TGGCTGCATTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR TCA 90 bp CACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGAATCCAGGTCTCCTaGGCCAGGCAGAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: HQAQVQEETSPGLCAGLARIQVS*ARQKPK
Trigger: CTTTGGCTTCTGCCTGGCTCAGGAGACCTGGATTCT...GGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp GATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTTCCAGCCGAGAATCCAGGTCTCCTaGGCCAGGCAGAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: DVQVRPLGQVLFTQGFQPRIQVS*ARQKPK
Trigger: CTTTGGCTTCTGCCTGGCTCAGGAGACCTGGATTCT...CGGCTGGAACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR TCA 90 bp GAGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGACAAACGATATGCAAATaGCATGCAAACCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: EPSGLGGRRGTQLRPSLGQTICK*HANQPR
Trigger: TCTGGGTTGGTTTGCATGTCATTTGCATATCGTTTG...TCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp GCTCTGGGCCCCTGTGAAGTCCACATAGCAGCGCAGGGCTCGGTGGAAGTCCTGCACGCTCTCTGCATCTaGCCTAGAGGAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: ALGPCEVHIAAQGSVEVLHALCI*PRGSEA
Trigger: AGCCTCACTTCCTCTAGGTCAGATGCAGAGAGCGTG...CAGGACTTCCACCGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp GCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGTTCAGCGATTCCAATaGAGCCAGCACCGGCCGGTA +
Preference number: 4 (lower is better)
Translates to: ALPPGPSPGGDKSWSLRWVQRFQ*SQHRPV
Trigger: TACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAAC...CCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp CCTCTGGGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGGTTCAGCGATTCCAATaGAGCCAGCACCGGCCGGTA +
Preference number: 4 (lower is better)
Translates to: PLGHEDVQVRPLGQVLFTVQRFQ*SQHRPV
Trigger: TACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAAC...CGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp ATCTTCTGGGCGGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACACCGCAGAGCCTGCTCTaGGCCTCCACGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: IFWADTCRQWLWAPVKSTPQSLL*ASTLSA
Trigger: TGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGG...TGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp GGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACATAGCAGCGCAGCTGCAGGCCTTCCTCTaGCACCTGGACCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GHMQTMALGPCEVHIAAQLQAFL*HLDLPL
Trigger: CAGAGGCAGGTCCAGGTGGCAGAGGAAGGCCTGCAG...CTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp GTACTCCAGCTTGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCAGCGATTCTGCGCTGGAAGGCCTTaGTGCCAGGCGACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VLQLGGIHGSEHCTVQRFCAGRP*CQATAG
Trigger: ACCAGCAGTCGCCTGGCAGCAAGGCCTTCCAGCGCA...GAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGAGTAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR GCA 90 bp GCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGACAAGTCCTGGTCTTTaGGCTGGGCTGGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: AWSQDSRKKAGPSLGGQMTSPGL*AGLASP
Trigger: TGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT...CATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp CCGCCCGAAAATGCAGGCTCCAGGATGCTGGGACTGTGGGGATTTGGAATGGGGCCTTTATTGCCTCTGTaGTGGGGTCCCAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PPENAGSRMLGLWGFGMGPLLPL*WGPSLG
Trigger: CCCCAGGCTGGGACCCCAGCACAGAGGCAATAAAGG...CCCCATTCCAAATCCCCACAGTCCCAGCATCCTGGAGCCTGCATTTTCGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp AGCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGCTTGGTGGCATCCATaGCAGCGAGCACTGCACGGT +
Preference number: 4 (lower is better)
Translates to: SLVPRQQEESRTLARRPDAWWHP*QRALHG
Trigger: ACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGC...ATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCCGTACTCCAGCTTGGTaGCATCCATGGCAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: VQEETSPGLCAGLASPEGRTPAW*HPWQRA
Trigger: TGCTCGCTGCCATGGATGCCACCAAGCTGGAGTACG...GCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp CACGGTTCAGCGATTCCAATGCAGCCAGCACCGGCCGGTAGACACCCAGGTGCTCGTACTCCAGCTTGGTaGCATCCATGGCAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: HGSAIPMQPAPAGRHPGARTPAW*HPWQRA
Trigger: TGCTCGCTGCCATGGATGCCACCAAGCTGGAGTACG...AGCACCTGGGTGTCTACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAACCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR CCA 90 bp ATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGCCTCTGAGTCTCGTACTCCAGCTTaGTGGCATCCATGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: MSSWRRFTWSRHCISASESRTPA*WHPWQR
Trigger: TCGCTGCCATGGATGCCACCAAGCTGGAGTACGAGA...CTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp CAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGCAAACTGGTCCACTTTaGAGGCCCTCTCGTACTCCA +
Preference number: 4 (lower is better)
Translates to: QEESRTLARRPDGLRPTQQTGPL*RPSRTP
Trigger: TGGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTG...CTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGCCTCCAAACTGGTCCACTTTaGAGGCCCTCTCGTACTCCA +
Preference number: 4 (lower is better)
Translates to: VDELLEAVHLEPPLHLGLQTGPL*RPSRTP
Trigger: TGGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTG...GAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp GGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTACCTTGCACTCGAGCTaGTCGATGAGCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GLRALPPGPSPGGDKSWSTLHSS*SMSSWR
Trigger: CCTCCAGGAGCTCATCGACCAGCTCGAGTGCAAGGT...AGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246190.11
CDS-3UTR CCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGACCTGGACCTGCCTCTaGGCCATGAGGATGTGCAAG +
Preference number: 4 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGTWTCL*AMRMCK
Trigger: CTTGCACATCCTCATGGCCCAGAGGCAGGTCCAGGT...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp ACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGAGGGAGGACCTGGACCTGCCTCTaGGCCATGAGGATGTGCAAG +
Preference number: 4 (lower is better)
Translates to: TSPGLCAGLASPEGSRGRTWTCL*AMRMCK
Trigger: CTTGCACATCCTCATGGCCCAGAGGCAGGTCCAGGT...CCTCCCTCTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GCACTAGCCCCACAGGTTGACAGCACCCTTACATACCGCCAGCCATGGGCCTGGACCTGGACCTGCCTCTaGGCCATGAGGATGTGCAAG +
Preference number: 4 (lower is better)
Translates to: ALAPQVDSTLTYRQPWAWTWTCL*AMRMCK
Trigger: CTTGCACATCCTCATGGCCCAGAGGCAGGTCCAGGT...CCAGGCCCATGGCTGGCGGTATGTAAGGGTGCTGTCAACCTGTGGGGCTAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp TCCTGCCAGAACTCATACAGGGTGAAGGAGGCACCGTCCAGCATCTTCTGGGCGCCTTCCTCTGCCACCTaGACCTGCCTCTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: SCQNSYRVKEAPSSIFWAPSSAT*TCLWAM
Trigger: CATGGCCCAGAGGCAGGTCCAGGTGGCAGAGGAAGG...CGCCCAGAAGATGCTGGACGGTGCCTCCTTCACCCTGTATGAGTTCTGGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp TGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCAGCGATTCCAATGCAGCCACCTTCCTCTGCCACCTaGACCTGCCTCTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: WWHPWQRALHGSAIPMQPPSSAT*TCLWAM
Trigger: CATGGCCCAGAGGCAGGTCCAGGTGGCAGAGGAAGG...TGGCTGCATTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp ATCTTCTGGGCGGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACACAGCGCAGGGCTCGGTaGAAGTCCTGCAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: IFWADTCRQWLWAPVKSTQRRAR*KSCRPS
Trigger: GGAAGGCCTGCAGGACTTCCACCGAGCCCTGCGCTG...TGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp GAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGACATGCAGACAATGGCTCTaGGCCCCTGTGAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: EESRTLARRPDGLRPTQTCRQWL*APVKST
Trigger: TGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCA...TGTCTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp ACCTGGAGCCGCCACTGCATCTCGGCCTCTGAGCTGCGCCCTGTGTCAGAAGAGTGCAGACAATGGCTCTaGGCCCCTGTGAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: TWSRHCISASELRPVSEECRQWL*APVKST
Trigger: TGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCA...CTCTTCTGACACAGGGCGCAGCTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp AGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGTGCAGACAATGGCTCTaGGCCCCTGTGAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: SWSMSSWRRFTWSRHCISCRQWL*APVKST
Trigger: TGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCA...CGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp AGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGACACATGCAGACAATaGCTCTGGGCCCCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: SWSMSSWRRFTWSRHCISDTCRQ*LWAPVK
Trigger: CTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTC...CGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp GAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGACACCGTCCAGCATCTTCTaGGCGGACACATGCAGACAA +
Preference number: 4 (lower is better)
Translates to: EESRTLARRPDGLRPTQTPSSIF*ADTCRQ
Trigger: TTGTCTGCATGTGTCCGCCCAGAAGATGCTGGACGG...TGTCTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp CAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGTATCCACCAGGAGGCTaGGAAGAACACAGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: QEESRTLARRPDGLRPTQYPPGG*EEHSGE
Trigger: CTCACCACTGTGTTCTTCCCAGCCTCCTGGTGGATA...CTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp AGCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATTCCTGGTCTTTGCGCTaGGCTGGCCAGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SLVPRQQEESRTLARRPDSWSLR*AGQSRR
Trigger: CCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGA...ATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp AGCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGAGGAGACAAGTCCTaGTCTTTGCGCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SLVPRQQEESRTLARRPDGGDKS*SLRWAG
Trigger: GCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCC...ATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp TGGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCGCAAGGTTTGAGGGTTaGGGGGTCCCTGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: WAESPSTRPKSRRRQVLVARFEG*GVPEHQ
Trigger: CTGATGCTCAGGGACCCCCCAACCCTCAAACCTTGC...GACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GCACTAGCCCCACAGGTTGACAGCACCCTTACATACCGCCAGCCATGGGCCTGGGCAAGGTTTGAGGGTTaGGGGGTCCCTGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: ALAPQVDSTLTYRQPWAWARFEG*GVPEHQ
Trigger: CTGATGCTCAGGGACCCCCCAACCCTCAAACCTTGC...CCAGGCCCATGGCTGGCGGTATGTAAGGGTGCTGTCAACCTGTGGGGCTAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp CACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCTGCCCTGAGAATGGGTaGGATGAGGGCATGCAAACG +
Preference number: 4 (lower is better)
Translates to: HQAQVQEETSPGLCAGLACPENG*DEGMQT
Trigger: CGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCA...GGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp ATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGCCTCTGAGTGCCCTGAGAATGGGTaGGATGAGGGCATGCAAACG +
Preference number: 4 (lower is better)
Translates to: MSSWRRFTWSRHCISASECPENG*DEGMQT
Trigger: CGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCA...CTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp GCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCATTGGCCAGGTCACCTTaGGGCTTCCCATACTGCCCT +
Preference number: 4 (lower is better)
Translates to: AQVQEETSPGLCAGLASPLARSP*GFPYCP
Trigger: AGGGCAGTATGGGAAGCCCCAAGGTGACCTGGCCAA...TGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGTTATTGCCTCTGTGCTaGGGTCCCAGCCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGLLPLC*GPSLGF
Trigger: GAACCCCAGGCTGGGACCCCAGCACAGAGGCAATAA...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp ACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGAGGGAGGTTATTGCCTCTGTGCTaGGGTCCCAGCCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: TSPGLCAGLASPEGSRGRLLPLC*GPSLGF
Trigger: GAACCCCAGGCTGGGACCCCAGCACAGAGGCAATAA...CCTCCCTCTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp AGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGGGACTGTGGGGATTTaGAATGGGGGTACAATGGGC +
Preference number: 4 (lower is better)
Translates to: SWSMSSWRRFTWSRHCISGTVGI*NGGTMG
Trigger: GCCCATTGTACCCCCATTCCAAATCCCCACAGTCCC...CGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp TGGGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGATGGCTACCCTGCCATaGCTTCCCCGCCCGAAAATG +
Preference number: 4 (lower is better)
Translates to: WAMRMCKSGPLARSSSRRMATLP*LPRPKM
Trigger: CATTTTCGGGCGGGGAAGCCATGGCAGGGTAGCCAT...CCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR TCA 90 bp CAGGCCCAGAGAGGTCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTTGAACGCAGCTCCCCCAGGCTaGGAACCCCATCGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: QAQRGQGAQLQSGSQDLNAAPPG*EPHRQS
Trigger: ACTTTGCCGATGGGGTTCTCAGCCTGGGGGAGCTGC...GTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGACCTCTCTGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR TCA 90 bp CTTCTGGGCGGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACATAGCAGCTCCCCCAGGCTaGGAACCCCATCGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: LLGGHMQTMALGPCEVHIAAPPG*EPHRQS
Trigger: ACTTTGCCGATGGGGTTCTCAGCCTGGGGGAGCTGC...TATGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR TCA 90 bp GGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGAGAACTCATACAGGGTaGAGGAGGCACCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GGDKSWSLRWAGQSRRLQRTHTG*RRHRPA
Trigger: TGCTGGACGGTGCCTCCTTCACCCTGTATGAGTTCT...CTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp TGGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCAGAATCCAGGTCTCCTaGGCCAGGCAGAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: WAESPSTRPKSRRRQVLVRIQVS*ARQKPK
Trigger: CTTTGGCTTCTGCCTGGCTCAGGAGACCTGGATTCT...GACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp TGGAGCCGCCACTGCATCTCGGCCTCTGAGCTGCGCCCTGTGTCAGAAGAGCCGTCTGGGGGCAATAGGTaGCCCTGGACCCAAATTATT +
Preference number: 4 (lower is better)
Translates to: WSRHCISASELRPVSEEPSGGNR*PWTQII
Trigger: AATAATTTGGGTCCAGGGTCACCTATTGCCCCCAGA...CGGCTCTTCTGACACAGGGCGCAGCTCAGAGGCCGAGATGCAGTGGCGGCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR GCA 90 bp TCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATCTCGGCTGCGGTTGCTaGCGACCCTGGACGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SHTALRMGGMRACKRYANLGCGC*RPWTPR
Trigger: CCGCGGCGTCCAGGGTCGGCAGCAACCGCAGCCGAG...ATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp CATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATGACCTCGGCTGCGGTTGCTaGCGACCCTGGACGCCGCGG +
Preference number: 4 (lower is better)
Translates to: HTALRMGGMRACKRYANDLGCGC*RPWTPR
Trigger: CCGCGGCGTCCAGGGTCGGCAGCAACCGCAGCCGAG...GTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp TTCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAACCGCTCGGGCTCGGCTaGGGTTGCTGCCGACCCTGG +
Preference number: 4 (lower is better)
Translates to: FPYCPENGWDEGMQTICKPLGLG*GCCRPW
Trigger: CCAGGGTCGGCAGCAACCGCAGCCGAGCCCGAGCGG...TTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp CGCAGAGCCTGCTCTGCGCCTCCACGCTCTCTGCATCTGACCGCCAGCCATGGGAAATTGTCGGTGAGATaGCCATCAATGCCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RRACSAPPRSLHLTASHGKLSVR*PSMPLN
Trigger: GTTCAGCGGCATTGATGGGCATCTCACCGACAATTT...CCCATGGCTGGCGGTCAGATGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493590.1
CDS-3UTR GCA 90 bp TGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTTCCAGCCGGGGGAAATTGTCGGTGAGATaGCCATCAATGCCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: CKSGPLARSSSRRGSSRGKLSVR*PSMPLN
Trigger: GTTCAGCGGCATTGATGGGCATCTCACCGACAATTT...CCCCCGGCTGGAACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp GCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCACATGGCAGCGAGCACTaGACGGTTCAGCGATTCCAA +
Preference number: 4 (lower is better)
Translates to: AQVQEETSPGLCAGLASPHGSEH*TVQRFQ
Trigger: TTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATG...TGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp GCCCTCTCGTACTCCAGCTTGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCCATGGCAGCGAGCACTaGACGGTTCAGCGATTCCAA +
Preference number: 4 (lower is better)
Translates to: ALSYSSLVASMAASTARFHGSEH*TVQRFQ
Trigger: TTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATG...GAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGAGTACGAGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR GCA 90 bp TTCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAAGTCCTGCCCGCCGGCTaGCGCAGAGCCTGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: FPYCPENGWDEGMQTICKVLPAG*RRACSA
Trigger: CGCAGAGCAGGCTCTGCGGCAGCCGGCGGGCAGGAC...TTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp ATCTTCTGGGCGGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACACTGCAGGCCTTCCTCTaGCACCTGGACCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: IFWADTCRQWLWAPVKSTLQAFL*HLDLPL
Trigger: CAGAGGCAGGTCCAGGTGGCAGAGGAAGGCCTGCAG...TGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp GCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGCAGGAGGCCTCATCCTaGCAGAACTCATACAGGGTG +
Preference number: 4 (lower is better)
Translates to: AWSQDSRKKAGPSLGGQMQEASS*QNSYRV
Trigger: CACCCTGTATGAGTTCTGGCAGGATGAGGCCTCCTG...CATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp ACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGAGGGAGGCAGGAGGCCTCATCCTaGCAGAACTCATACAGGGTG +
Preference number: 4 (lower is better)
Translates to: TSPGLCAGLASPEGSRGRQEASS*QNSYRV
Trigger: CACCCTGTATGAGTTCTGGCAGGATGAGGCCTCCTG...CCTCCCTCTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp ATGGCTCTGGGCCCCTGTGAAGTCCACATAGCAGCGCAGGGCTCGGTGGAAGTCCAGGAGGCCTCATCCTaGCAGAACTCATACAGGGTG +
Preference number: 4 (lower is better)
Translates to: MALGPCEVHIAAQGSVEVQEASS*QNSYRV
Trigger: CACCCTGTATGAGTTCTGGCAGGATGAGGCCTCCTG...GACTTCCACCGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp GATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTTCCAGCCGTGGCACATCCATGGGTaGTGGAAGAGTCAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: DVQVRPLGQVLFTQGFQPWHIHG*WKSQSL
Trigger: TAGGCTCTGACTCTTCCAGCACCCATGGATGTGCCA...CGGCTGGAACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR GCA 90 bp GCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGTGGGGCTTCCCATACTaGCCTGAGAATGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: ALPPGPSPGGDKSWSLRWWGFPY*PENGWD
Trigger: ATCCCACCCATTCTCAGGGCAGTATGGGAAGCCCCA...CCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp GCACTAGCCCCACAGGTTGACAGCACCCTTACATACCGCCAGCCATGGGCCTGGTGGGGCTTCCCATACTaGCCTGAGAATGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: ALAPQVDSTLTYRQPWAWWGFPY*PENGWD
Trigger: ATCCCACCCATTCTCAGGGCAGTATGGGAAGCCCCA...CCAGGCCCATGGCTGGCGGTATGTAAGGGTGCTGTCAACCTGTGGGGCTAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR GCA 90 bp GAACACAGTGGTGAGGGTGTCCGGGGCCCGCAGGTGGTCGATGAGGATGCGCTGGAGAGCATTCTTGTCTaGTCTGCGGAAAACGTCCTG +
Preference number: 4 (lower is better)
Translates to: EHSGEGVRGPQVVDEDALESILV*SAENVL
Trigger: CAGGACGTTTTCCGCAGAGCAGACAAGAATGCTCTC...CAGCGCATCCTCATCGACCACCTGCGGGCCCCGGACACCCTCACCACTGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp CATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATGACGGTTGCTGCCGACCCTaGACGCCGCGGCGGACTCGG +
Preference number: 4 (lower is better)
Translates to: HTALRMGGMRACKRYANDGCCRP*TPRRTR
Trigger: CCGAGTCCGCCGCGGCGTCCAGGGTCGGCAGCAACC...GTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GGTGAAGGAGGCACCGTCCAGCATCTTCTGGGCGGACACATGCAGACAATGGCTGCTTGGTGGCATCCATaGCAGCGAGCACTGCACGGT +
Preference number: 4 (lower is better)
Translates to: GEGGTVQHLLGGHMQTMAAWWHP*QRALHG
Trigger: ACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGC...AGCCATTGTCTGCATGTGTCCGCCCAGAAGATGCTGGACGGTGCCTCCTTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGTCTCGTACTCCAGCTTaGTGGCATCCATGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGSRTPA*WHPWQR
Trigger: TCGCTGCCATGGATGCCACCAAGCTGGAGTACGAGA...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp CACTGCACGGTTCAGCGATTCCAATGCAGCCAGCACCGGCCGGTAGACACCCAGTCTCGTACTCCAGCTTaGTGGCATCCATGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: HCTVQRFQCSQHRPVDTQSRTPA*WHPWQR
Trigger: TCGCTGCCATGGATGCCACCAAGCTGGAGTACGAGA...CTGGGTGTCTACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAACCGTGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR CCA 90 bp CCTCTGGGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGTCTCGTACTCCAGCTTaGTGGCATCCATGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: PLGHEDVQVRPLGQVLFTSRTPA*WHPWQR
Trigger: TCGCTGCCATGGATGCCACCAAGCTGGAGTACGAGA...CGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGAAGCGCGTCACAAACTaGTCCACTTTGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGKRVTN*STLEAL
Trigger: GAGGGCCTCCAAAGTGGACCAGTTTGTGACGCGCTT...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGAAGCGCGTCACAAACTaGTCCACTTTGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: ALPPGPSPGGDKSWSLRWKRVTN*STLEAL
Trigger: GAGGGCCTCCAAAGTGGACCAGTTTGTGACGCGCTT...CCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACATAGCAGCGCAGGCAAGTCAGGCCCCTTaGCCAGGTCCTCTTCACGCA +
Preference number: 4 (lower is better)
Translates to: GHMQTMALGPCEVHIAAQASQAP*PGPLHA
Trigger: TGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGC...CTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp GTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTGCAGACAATGGCTCTaGGCCCCTGTGAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: VQEETSPGLCAGLASPEGCRQWL*APVKST
Trigger: TGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCA...GCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp ACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGAGGGAGGGACACATGCAGACAATaGCTCTGGGCCCCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: TSPGLCAGLASPEGSRGRDTCRQ*LWAPVK
Trigger: CTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTC...CCTCCCTCTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTGACACATGCAGACAATaGCTCTGGGCCCCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GLRALPPGPSPGGDKSWSDTCRQ*LWAPVK
Trigger: CTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTC...AGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCGACACATGCAGACAATaGCTCTGGGCCCCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: QEETSPGLCAGLASPEGSDTCRQ*LWAPVK
Trigger: CTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTC...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCACCGTCCAGCATCTTCTaGGCGGACACATGCAGACAA +
Preference number: 4 (lower is better)
Translates to: AQVQEETSPGLCAGLASPPSSIF*ADTCRQ
Trigger: TTGTCTGCATGTGTCCGCCCAGAAGATGCTGGACGG...TGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GTACTCCAGCTTGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCAGCGATTCTCGATGAGGATGCGCTaGAAGGCCTTGCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VLQLGGIHGSEHCTVQRFSMRMR*KALLPG
Trigger: GCCTGGCAGCAAGGCCTTCCAGCGCATCCTCATCGA...GAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGAGTAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp GTGTCAGAAGAGCCGGGGGACCAGGTGGATGACCGGCTGACACTCCTCAGGGCTTATCCACCAGGAGGCTaGGAAGAACACAGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: VSEEPGDQVDDRLTLLRAYPPGG*EEHSGE
Trigger: CTCACCACTGTGTTCTTCCCAGCCTCCTGGTGGATA...AGCCCTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCCGGCTCTTCTGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp CTTCTGGGCGGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACATACCAGTCCCTGATCCCTaGGCTGAGAGCCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: LLGGHMQTMALGPCEVHIPVPDP*AESPST
Trigger: GGTGGAAGGGCTCTCAGCCCAGGGATCAGGGACTGG...TATGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCCTCTGGCACATCCATaGGTGCTGGAAGAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGPLAHP*VLEESE
Trigger: CTCTGACTCTTCCAGCACCCATGGATGTGCCAGAGG...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GGTTCAGCGATTCCAATGCAGCCAGCACCGGCCGGTAGACACCCAGGTGCTCTGCCTCTGGCACATCCATaGGTGCTGGAAGAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: GSAIPMQPAPAGRHPGALPLAHP*VLEESE
Trigger: CTCTGACTCTTCCAGCACCCATGGATGTGCCAGAGG...CAGAGCACCTGGGTGTCTACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGTGCCCTGAGAATGGGTaGGATGAGGGCATGCAAACG +
Preference number: 4 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGCPENG*DEGMQT
Trigger: CGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCA...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp AGCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATTTGGCCAGGTCACCTTaGGGCTTCCCATACTGCCCT +
Preference number: 4 (lower is better)
Translates to: SLVPRQQEESRTLARRPDLARSP*GFPYCP
Trigger: AGGGCAGTATGGGAAGCCCCAAGGTGACCTGGCCAA...ATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
3UTR CAA 72 bp GTCCCGGGGCCCTCGGCGTGTGCAGGTCTGGCTCAGTaGTTATTCATTATCCACCAGGAGGCTGGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: VPGPSACAGLAQ*LFIIHQEAGKN
Trigger: GTTCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCACACGCCGAGGGCCCCGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp GGAAACAGGCCCAGAGAGGTCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTGCCCATCAATGCCGCTaGACAGTTCCTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GNRPREVKGHSYKVGARIAHQCR*TVPAAP
Trigger: GGGAGCTGCAGGAACTGTTCAGCGGCATTGATGGGC...AATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGACCTCTCTGGGCCTGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR TCA 90 bp CTTCTGGGCGGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACATAGCCCATCAATGCCGCTaGACAGTTCCTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LLGGHMQTMALGPCEVHIAHQCR*TVPAAP
Trigger: GGGAGCTGCAGGAACTGTTCAGCGGCATTGATGGGC...TATGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR TCA 90 bp GGCCTTGCACTCGAGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGTTTCTAAATTGTCGGTaGGATGCCCATCAATGCCGC +
Preference number: 4 (lower is better)
Translates to: GLALELVDELLEAVHLEPFLNCR*DAHQCR
Trigger: GCGGCATTGATGGGCATCTCACCGACAATTTAGAAA...CGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTGCAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR TCA 90 bp GTCCCTGAGCATCAGCCCTGCTTCTGCCGCTGGCTGAGGAGGAGCAGAAGCCTGGACACCCAGGTGCTCTaGGAAGTAGTCACACAGTTT +
Preference number: 4 (lower is better)
Translates to: VPEHQPCFCRWLRRSRSLDTQVL*EVVTQF
Trigger: AAACTGTGTGACTACTTCTCAGAGCACCTGGGTGTC...CAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp GAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGACAGACACCCAGGTGCTCTaGGAAGTAGTCACACAGTTT +
Preference number: 4 (lower is better)
Translates to: EESRTLARRPDGLRPTQTDTQVL*EVVTQF
Trigger: AAACTGTGTGACTACTTCTCAGAGCACCTGGGTGTC...TGTCTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp GTGTCAGAAGAGCCGGGGGACCAGGTGGATGACCGGCTGACACTCCTCAGGGCTGACACCCAGGTGCTCTaGGAAGTAGTCACACAGTTT +
Preference number: 4 (lower is better)
Translates to: VSEEPGDQVDDRLTLLRADTQVL*EVVTQF
Trigger: AAACTGTGTGACTACTTCTCAGAGCACCTGGGTGTC...AGCCCTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCCGGCTCTTCTGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000493590.1
CDS-3UTR GCA 90 bp CACTCGAGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCCATTCTTGTCTGCTCTaGGGAAAACGTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: HSSWSMSSWRRFTWSRHCHSCLL*GKRPGR
Trigger: TCTTCCAGGACGTTTTCCGCAGAGCAGACAAGAATG...GCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp GGCCTCATCCTGCCAGAACTCATACAGGGTGAAGGAGGCACCGTCCAGCATCTTCCGCTGAACAGTTCCTaGAGCTCCCCCAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GLILPELIQGEGGTVQHLPLNSS*SSPRLR
Trigger: TCTCAGCCTGGGGGAGCTGCAGGAACTGTTCAGCGG...AAGATGCTGGACGGTGCCTCCTTCACCCTGTATGAGTTCTGGCAGGATGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp TGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCAGCGATTCCAATGCAGCCAACAAGTCCTGGTCTTTaGGCTGGGCTGGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: WWHPWQRALHGSAIPMQPTSPGL*AGLASP
Trigger: TGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT...TGGCTGCATTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR GCA 90 bp ACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGAGGGAGGTGGCACATCCATGGGTaGTGGAAGAGTCAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: TSPGLCAGLASPEGSRGRWHIHG*WKSQSL
Trigger: TAGGCTCTGACTCTTCCAGCACCCATGGATGTGCCA...CCTCCCTCTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GGAAACAGGCCCAGAGAGGTCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTGCTTGGTGGCATCCATaGCAGCGAGCACTGCACGGT +
Preference number: 4 (lower is better)
Translates to: GNRPREVKGHSYKVGARIAWWHP*QRALHG
Trigger: ACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGC...AATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGACCTCTCTGGGCCTGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR CCA 90 bp AGCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATTCTCGTACTCCAGCTTaGTGGCATCCATGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SLVPRQQEESRTLARRPDSRTPA*WHPWQR
Trigger: TCGCTGCCATGGATGCCACCAAGCTGGAGTACGAGA...ATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp ACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGAGGGAGGCAAACTGGTCCACTTTaGAGGCCCTCTCGTACTCCA +
Preference number: 4 (lower is better)
Translates to: TSPGLCAGLASPEGSRGRQTGPL*RPSRTP
Trigger: TGGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTG...CCTCCCTCTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp CACGGTTCAGCGATTCCAATGCAGCCAGCACCGGCCGGTAGACACCCAGGTGCTCAAACTGGTCCACTTTaGAGGCCCTCTCGTACTCCA +
Preference number: 4 (lower is better)
Translates to: HGSAIPMQPAPAGRHPGAQTGPL*RPSRTP
Trigger: TGGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTG...AGCACCTGGGTGTCTACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAACCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR CCA 90 bp GGCCTCATCCTGCCAGAACTCATACAGGGTGAAGGAGGCACCGTCCAGCATCTTTCGATGAGGATGCGCTaGAAGGCCTTGCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GLILPELIQGEGGTVQHLSMRMR*KALLPG
Trigger: GCCTGGCAGCAAGGCCTTCCAGCGCATCCTCATCGA...AAGATGCTGGACGGTGCCTCCTTCACCCTGTATGAGTTCTGGCAGGATGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGTATCCACCAGGAGGCTaGGAAGAACACAGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGYPPGG*EEHSGE
Trigger: CTCACCACTGTGTTCTTCCCAGCCTCCTGGTGGATA...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp AGCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATCCTCTGGCACATCCATaGGTGCTGGAAGAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: SLVPRQQEESRTLARRPDPLAHP*VLEESE
Trigger: CTCTGACTCTTCCAGCACCCATGGATGTGCCAGAGG...ATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp CAGGCCCAGAGAGGTCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTTGAACCCCACTGCCTCACAGTaGATCCCCCACCATCAGCCA +
Preference number: 4 (lower is better)
Translates to: QAQRGQGAQLQSGSQDLNPTASQ*IPHHQP
Trigger: TGGCTGATGGTGGGGGATCCACTGTGAGGCAGTGGG...GTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGACCTCTCTGGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR TCA 90 bp GAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGACATTTCTAAATTGTCGGTaGGATGCCCATCAATGCCGC +
Preference number: 4 (lower is better)
Translates to: EESRTLARRPDGLRPTQTFLNCR*DAHQCR
Trigger: GCGGCATTGATGGGCATCTCACCGACAATTTAGAAA...TGTCTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGGACACCCAGGTGCTCTaGGAAGTAGTCACACAGTTT +
Preference number: 4 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGDTQVL*EVVTQF
Trigger: AAACTGTGTGACTACTTCTCAGAGCACCTGGGTGTC...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp TTCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAAGGCCTCCAGGGTATCTaGCGCCCCCTCCAGCGAGCT +
Preference number: 4 (lower is better)
Translates to: FPYCPENGWDEGMQTICKGLQGI*RPLQRA
Trigger: AGCTCGCTGGAGGGGGCGTCAGATACCCTGGAGGCC...TTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp GGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACATAGCAGCGCAGAGAACTCATACAGGGTaGAGGAGGCACCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GHMQTMALGPCEVHIAAQRTHTG*RRHRPA
Trigger: TGCTGGACGGTGCCTCCTTCACCCTGTATGAGTTCT...CTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp GCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCATCTGGGGGCAATAGGTaGCCCTGGACCCAAATTATT +
Preference number: 4 (lower is better)
Translates to: AQVQEETSPGLCAGLASPSGGNR*PWTQII
Trigger: AATAATTTGGGTCCAGGGTCACCTATTGCCCCCAGA...TGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp GTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCTGGGGGCAATAGGTaGCCCTGGACCCAAATTATT +
Preference number: 4 (lower is better)
Translates to: VQEETSPGLCAGLASPEGSGGNR*PWTQII
Trigger: AATAATTTGGGTCCAGGGTCACCTATTGCCCCCAGA...GCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp TCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTTGAACCCAAGCCCCTAGCTCCGCTGAACAGTTCCTaGAGCTCCCCCAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SRGTATKWEPGFEPKPLAPLNSS*SSPRLR
Trigger: TCTCAGCCTGGGGGAGCTGCAGGAACTGTTCAGCGG...AGCTAGGGGCTTGGGTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR GCA 90 bp CACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAAATTGTCGGTGAGATaGCCATCAATGCCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: HQAQVQEETSPGLCAGLAKLSVR*PSMPLN
Trigger: GTTCAGCGGCATTGATGGGCATCTCACCGACAATTT...GGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp CAGGCCCAGAGAGGTCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTTGAACGTTCAGCGATTCCAATaGAGCCAGCACCGGCCGGTA +
Preference number: 4 (lower is better)
Translates to: QAQRGQGAQLQSGSQDLNVQRFQ*SQHRPV
Trigger: TACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAAC...GTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGACCTCTCTGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR GCA 90 bp TCCAGCTTGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCAGCGATTCCAATGTTCAGCGATTCCAATaGAGCCAGCACCGGCCGGTA +
Preference number: 4 (lower is better)
Translates to: SSLVASMAASTARFSDSNVQRFQ*SQHRPV
Trigger: TACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAAC...ATTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR GCA 90 bp CAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGGATATGCAAATGACATaGAAACCAACCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: QEESRTLARRPDGLRPTQDMQMT*KPTQRP
Trigger: AGGCCTCTGGGTTGGTTTGCATGTCATTTGCATATC...CTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp CAGGCCCAGAGAGGTCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTTGAACACAGCAGATGCCCACTaGCTCACAGTGGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: QAQRGQGAQLQSGSQDLNTADAH*LTVDPP
Trigger: TGGGGGATCCACTGTGAGGCAGTGGGCATCTGCTGT...GTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGACCTCTCTGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR CCA 90 bp ATCTTCTGGGCGGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACACGTACTCCAGCTTGGTaGCATCCATGGCAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: IFWADTCRQWLWAPVKSTRTPAW*HPWQRA
Trigger: TGCTCGCTGCCATGGATGCCACCAAGCTGGAGTACG...TGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp CATCTTCTGGGCGGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACCCGTCCAGCATCTTCTaGGCGGACACATGCAGACAA +
Preference number: 4 (lower is better)
Translates to: HLLGGHMQTMALGPCEVHPSSIF*ADTCRQ
Trigger: TTGTCTGCATGTGTCCGCCCAGAAGATGCTGGACGG...GTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp GGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGCGGCGTGTGCAGGTCTaGCTCAGTTGTTATTCATTA +
Preference number: 4 (lower is better)
Translates to: GHEDVQVRPLGQVLFTQGRRVQV*LSCYSL
Trigger: TAATGAATAACAACTGAGCCAGACCTGCACACGCCG...CCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp CAGGCCCAGAGAGGTCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTTGAACCTCCACTCACCAGCTTaGTGGCATCCATGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: QAQRGQGAQLQSGSQDLNLHSPA*WHPWQR
Trigger: TCGCTGCCATGGATGCCACCAAGCTGGTGAGTGGAG...GTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGACCTCTCTGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR TCA 90 bp ACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGAGGGAGGTTTCTAAATTGTCGGTaGGATGCCCATCAATGCCGC +
Preference number: 4 (lower is better)
Translates to: TSPGLCAGLASPEGSRGRFLNCR*DAHQCR
Trigger: GCGGCATTGATGGGCATCTCACCGACAATTTAGAAA...CCTCCCTCTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp CCTCTGGGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGTTTCTAAATTGTCGGTaGGATGCCCATCAATGCCGC +
Preference number: 4 (lower is better)
Translates to: PLGHEDVQVRPLGQVLFTFLNCR*DAHQCR
Trigger: GCGGCATTGATGGGCATCTCACCGACAATTTAGAAA...CGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR TCA 90 bp ATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACATAGCAGCGCAGGGCTCGGACACCCAGGTGCTCTaGGAAGTAGTCACACAGTTT +
Preference number: 4 (lower is better)
Translates to: MQTMALGPCEVHIAAQGSDTQVL*EVVTQF
Trigger: AAACTGTGTGACTACTTCTCAGAGCACCTGGGTGTC...CGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR TCA 90 bp GTTCAGAGGCCTCTGGGGGCAATAGGTGACCCTGGACCCAAATTATTGCTACTTGGCTCTGGGCCCCTGTaGAGTCCACATAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: VQRPLGAIGDPGPKLLLLGSGPL*SPHSSA
Trigger: TGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCC...AAGTAGCAATAATTTGGGTCCAGGGTCACCTATTGCCCCCAGAGGCCTCTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp CAGAGAGGTCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTTGAACCCAAGCGTGGGAGCCAGGATTTaGACCCAAGCCCCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: QRGQGAQLQSGSQDLNPSVGARI*TQAPSS
Trigger: AGAGCTAGGGGCTTGGGTTCAAATCCTGGCTCCCAC...GCTTGGGTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGACCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR GCA 90 bp GCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGCATTCTTGTCTGCTCTaGGGAAAACGTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: ALPPGPSPGGDKSWSLRWHSCLL*GKRPGR
Trigger: TCTTCCAGGACGTTTTCCGCAGAGCAGACAAGAATG...CCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp TGGGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGCATTCTTGTCTGCTCTaGGGAAAACGTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: WAMRMCKSGPLARSSSRRHSCLL*GKRPGR
Trigger: TCTTCCAGGACGTTTTCCGCAGAGCAGACAAGAATG...CCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp GCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTCATTCTTGTCTGCTCTaGGGAAAACGTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: AMRMCKSGPLARSSSRRGHSCLL*GKRPGR
Trigger: TCTTCCAGGACGTTTTCCGCAGAGCAGACAAGAATG...ACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp GAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGACAATCATCATTCTTGTCTaGTCTGCGGAAAACGTCCTG +
Preference number: 4 (lower is better)
Translates to: EESRTLARRPDGLRPTQTIIILV*SAENVL
Trigger: CAGGACGTTTTCCGCAGAGCAGACAAGAATGATGAT...TGTCTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246190.11
ENST00000375238.8
CDS-3UTR GCA 90 bp TGGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCAAATTGTCGGTGAGATaGCCATCAATGCCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: WAESPSTRPKSRRRQVLVKLSVR*PSMPLN
Trigger: GTTCAGCGGCATTGATGGGCATCTCACCGACAATTT...GACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp GCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTAAATTGTCGGTGAGATaGCCATCAATGCCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: AMRMCKSGPLARSSSRRGKLSVR*PSMPLN
Trigger: GTTCAGCGGCATTGATGGGCATCTCACCGACAATTT...ACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp ATGGCTCTGGGCCCCTGTGAAGTCCACATAGCAGCGCAGGGCTCGGTGGAAGTCAAATTGTCGGTGAGATaGCCATCAATGCCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: MALGPCEVHIAAQGSVEVKLSVR*PSMPLN
Trigger: GTTCAGCGGCATTGATGGGCATCTCACCGACAATTT...GACTTCCACCGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR GCA 90 bp GTTCAGAGGCCTCTGGGGGCAATAGGTGACCCTGGACCCAAATTATTGCTACTTCCTGAGCATCAGCCCTaGTTCTGCCGCTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VQRPLGAIGDPGPKLLLLPEHQP*FCRWLR
Trigger: CCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGG...AAGTAGCAATAATTTGGGTCCAGGGTCACCTATTGCCCCCAGAGGCCTCTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGGGTGGGATGAGGGCATaGAAACGATATGCAAATGAC +
Preference number: 4 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGGGMRA*KRYAND
Trigger: GTCATTTGCATATCGTTTGCATGCCCTCATCCCACC...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp GCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGGTGGGATGAGGGCATaGAAACGATATGCAAATGAC +
Preference number: 4 (lower is better)
Translates to: AQVQEETSPGLCAGLASPGGMRA*KRYAND
Trigger: GTCATTTGCATATCGTTTGCATGCCCTCATCCCACC...TGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp ATCTTCTGGGCGGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACAAAGCGCGTCACAAACTaGTCCACTTTGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: IFWADTCRQWLWAPVKSTKRVTN*STLEAL
Trigger: GAGGGCCTCCAAAGTGGACCAGTTTGTGACGCGCTT...TGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CCA 90 bp TCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATCAGCGCAGGGCTCGGTaGAAGTCCTGCAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SHTALRMGGMRACKRYANQRRAR*KSCRPS
Trigger: GGAAGGCCTGCAGGACTTCCACCGAGCCCTGCGCTG...ATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp TCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATCTGCCAGGCGACTGCTaGTGCCTTCTCCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SHTALRMGGMRACKRYANLPGDC*CLLQEA
Trigger: GGCCTCCTGGAGAAGGCACCAGCAGTCGCCTGGCAG...ATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCCGGCGTGTGCAGGTCTaGCTCAGTTGTTATTCATTA +
Preference number: 4 (lower is better)
Translates to: QEETSPGLCAGLASPEGSRRVQV*LSCYSL
Trigger: TAATGAATAACAACTGAGCCAGACCTGCACACGCCG...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCCGGCGTGTGCAGGTCTaGCTCAGTTGTTATTCATTA +
Preference number: 4 (lower is better)
Translates to: VQEETSPGLCAGLASPEGRRVQV*LSCYSL
Trigger: TAATGAATAACAACTGAGCCAGACCTGCACACGCCG...GCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp GCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGCAAATTATTGCTACTTaGCCAGGTCACCTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: ALPPGPSPGGDKSWSLRWQIIAT*PGHLGA
Trigger: AGCCCCAAGGTGACCTGGCCAAGTAGCAATAATTTG...CCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp AGGTCTGGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGGGAAGAACACAGTGGAAGAACACAGTGGTaGGGGTGTCCGGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: RSGSVVIHYPPGGWEEHSGRTQW*GCPGPA
Trigger: TGCGGGCCCCGGACACCCTCACCACTGTGTTCTTCC...ACTGTGTTCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp GTCCCTGAGCATCAGCCCTGCTTCTGCCGCTGGCTGAGGAGGAGCAGAAGCCTGCAAACGATATGCAAATaGCATGCAAACCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: VPEHQPCFCRWLRRSRSLQTICK*HANQPR
Trigger: TCTGGGTTGGTTTGCATGTCATTTGCATATCGTTTG...CAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp GGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTCTGGAATTCCTCAAATaGGAGCATTCTTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GLRALPPGPSPGGDKSWSLEFLK*EHSCLL
Trigger: GAGCAGACAAGAATGCTCTCATTTGAGGAATTCCAG...AGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR GCA 90 bp GCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGATCATCATTCTTGTCTaGTCTGCGGAAAACGTCCTG +
Preference number: 4 (lower is better)
Translates to: ALPPGPSPGGDKSWSLRWIIILV*SAENVL
Trigger: CAGGACGTTTTCCGCAGAGCAGACAAGAATGATGAT...CCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
CDS-3UTR GCA 90 bp CTCTGGGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCATCATCATTCTTGTCTaGTCTGCGGAAAACGTCCTG +
Preference number: 4 (lower is better)
Translates to: LWAMRMCKSGPLARSSSRIIILV*SAENVL
Trigger: CAGGACGTTTTCCGCAGAGCAGACAAGAATGATGAT...GCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000607805.5
CDS-3UTR GCA 90 bp CAGAGAGGTCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTTGAACCCAAGCCATGGCAGCGAGCACTaGACGGTTCAGCGATTCCAA +
Preference number: 4 (lower is better)
Translates to: QRGQGAQLQSGSQDLNPSHGSEH*TVQRFQ
Trigger: TTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATG...GCTTGGGTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGACCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR GCA 90 bp CATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATGACACCTGGAGCCGCCACTaGATCTCGGCCTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: HTALRMGGMRACKRYANDTWSRH*ISASEL
Trigger: CAGCTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGT...GTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp TCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATTGCGCTGGAAGGCCTTaGTGCCAGGCGACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SHTALRMGGMRACKRYANCAGRP*CQATAG
Trigger: ACCAGCAGTCGCCTGGCAGCAAGGCCTTCCAGCGCA...ATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp CATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATGACGGGGCCCTCGGCGTGTaGAGGTCTGGCTCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: HTALRMGGMRACKRYANDGALGV*RSGSVV
Trigger: AACAACTGAGCCAGACCTGCACACGCCGAGGGCCCC...GTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCGATATGCAAATGACATaGAAACCAACCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: QEETSPGLCAGLASPEGSDMQMT*KPTQRP
Trigger: AGGCCTCTGGGTTGGTTTGCATGTCATTTGCATATC...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp GCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGATATGCAAATGACATaGAAACCAACCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ALPPGPSPGGDKSWSLRWDMQMT*KPTQRP
Trigger: AGGCCTCTGGGTTGGTTTGCATGTCATTTGCATATC...CCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GGCCTCATCCTGCCAGAACTCATACAGGGTGAAGGAGGCACCGTCCAGCATCTTTATCCACCAGGAGGCTaGGAAGAACACAGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GLILPELIQGEGGTVQHLYPPGG*EEHSGE
Trigger: CTCACCACTGTGTTCTTCCCAGCCTCCTGGTGGATA...AAGATGCTGGACGGTGCCTCCTTCACCCTGTATGAGTTCTGGCAGGATGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp TGCAGGTCTGGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGGGAAGAACACCCAGTCCCTGATCCCTaGGCTGAGAGCCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: CRSGSVVIHYPPGGWEEHPVPDP*AESPST
Trigger: GGTGGAAGGGCTCTCAGCCCAGGGATCAGGGACTGG...GTGTTCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp TCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTTGAACCCAAGCCCCTAGCTCCTGAGTCAAGACTGTaGAGGATCCCACAGCACAGC +
Preference number: 4 (lower is better)
Translates to: SRGTATKWEPGFEPKPLAPESRL*RIPQHS
Trigger: GCTGTGCTGTGGGATCCTCCACAGTCTTGACTCAGG...AGCTAGGGGCTTGGGTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR TCA 90 bp CATCTTCTGGGCGGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACTTTCTAAATTGTCGGTaGGATGCCCATCAATGCCGC +
Preference number: 4 (lower is better)
Translates to: HLLGGHMQTMALGPCEVHFLNCR*DAHQCR
Trigger: GCGGCATTGATGGGCATCTCACCGACAATTTAGAAA...GTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR TCA 90 bp GTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCGCTTGGAGGCTGAAGTaGCAAACAATAAAATACAGG +
Preference number: 4 (lower is better)
Translates to: VQEETSPGLCAGLASPEGAWRLK*QTIKYR
Trigger: CCTGTATTTTATTGTTTGTCACTTCAGCCTCCAAGC...GCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp GCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCTTGGAGGCTGAAGTaGCAAACAATAAAATACAGG +
Preference number: 4 (lower is better)
Translates to: AWSQDSRKKAGPSLGGQMAWRLK*QTIKYR
Trigger: CCTGTATTTTATTGTTTGTCACTTCAGCCTCCAAGC...CATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp GCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGCAAACGATATGCAAATaGCATGCAAACCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: ALPPGPSPGGDKSWSLRWQTICK*HANQPR
Trigger: TCTGGGTTGGTTTGCATGTCATTTGCATATCGTTTG...CCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp CAGGCCCAGAGAGGTCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTTGAACTCTCACTGGTCACAGTaGTGTATGAAGGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QAQRGQGAQLQSGSQDLNSHWSQ*CMKGSS
Trigger: AGAGCTGCCCTTCATACATCACTGTGACCAGTGAGA...GTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGACCTCTCTGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR GCA 90 bp CTCCAGCTTGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCAGCGATTCCAACATTCTTGTCTGCTCTaGGGAAAACGTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LQLGGIHGSEHCTVQRFQHSCLL*GKRPGR
Trigger: TCTTCCAGGACGTTTTCCGCAGAGCAGACAAGAATG...TTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR GCA 90 bp GTTCAGAGGCCTCTGGGGGCAATAGGTGACCCTGGACCCAAATTATTGCTACTTTTCTGGGCGGACACATaGAGACAATGGCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VQRPLGAIGDPGPKLLLLFWADT*RQWLWA
Trigger: GGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAA...AAGTAGCAATAATTTGGGTCCAGGGTCACCTATTGCCCCCAGAGGCCTCTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp CATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATGACTTCCCCGCCCGAAAATaGAGGCTCCAGGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: HTALRMGGMRACKRYANDFPARK*RLQDAG
Trigger: CCCAGCATCCTGGAGCCTGCATTTTCGGGCGGGGAA...GTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp GTTCAGAGGCCTCTGGGGGCAATAGGTGACCCTGGACCCAAATTATTGCTACTTCGTACTCCAGCTTGGTaGCATCCATGGCAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: VQRPLGAIGDPGPKLLLLRTPAW*HPWQRA
Trigger: TGCTCGCTGCCATGGATGCCACCAAGCTGGAGTACG...AAGTAGCAATAATTTGGGTCCAGGGTCACCTATTGCCCCCAGAGGCCTCTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp TCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATTCGATGAGGATGCGCTaGAAGGCCTTGCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SHTALRMGGMRACKRYANSMRMR*KALLPG
Trigger: GCCTGGCAGCAAGGCCTTCCAGCGCATCCTCATCGA...ATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp CCAGGCAGAAGCCAAAGTAGCTTGGAGGCTGAAGTGACAAACAATAAAATACAGTCCGGGGCCCGCAGGTaGTCGATGAGGATGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PGRSQSSLEAEVTNNKIQSGARR*SMRMRW
Trigger: CCAGCGCATCCTCATCGACCACCTGCGGGCCCCGGA...CTGTATTTTATTGTTTGTCACTTCAGCCTCCAAGCTACTTTGGCTTCTGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp CATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATGACGTCTTTGCGCTGGGCTaGCCAGTCCAGAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HTALRMGGMRACKRYANDVFALG*PVQKAP
Trigger: TGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGAC...GTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GTTCAGAGGCCTCTGGGGGCAATAGGTGACCCTGGACCCAAATTATTGCTACTTGGAGGAGCAGAAGCCTaGTCCCAAGACAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VQRPLGAIGDPGPKLLLLGGAEA*SQDSRK
Trigger: CTTCCTGCTGTCTTGGGACCAGGCTTCTGCTCCTCC...AAGTAGCAATAATTTGGGTCCAGGGTCACCTATTGCCCCCAGAGGCCTCTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp GGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACATAGCAGCGCAGCAAATTATTGCTACTTaGCCAGGTCACCTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GHMQTMALGPCEVHIAAQQIIAT*PGHLGA
Trigger: AGCCCCAAGGTGACCTGGCCAAGTAGCAATAATTTG...CTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CCA 90 bp CAGAGAGGTCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTTGAACCCAAGCGGCACAGCTACAAAGTaGGAGCCAGGATTTGAACCC +
Preference number: 4 (lower is better)
Translates to: QRGQGAQLQSGSQDLNPSGTATK*EPGFEP
Trigger: GGGTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCC...GCTTGGGTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGACCTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR TCA 90 bp CAGAGAGGTCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTTGAACCCAAGCGACACCCAGGTGCTCTaGGAAGTAGTCACACAGTTT +
Preference number: 4 (lower is better)
Translates to: QRGQGAQLQSGSQDLNPSDTQVL*EVVTQF
Trigger: AAACTGTGTGACTACTTCTCAGAGCACCTGGGTGTC...GCTTGGGTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGACCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR TCA 90 bp GTTCAGAGGCCTCTGGGGGCAATAGGTGACCCTGGACCCAAATTATTGCTACTTAGAACTCATACAGGGTaGAGGAGGCACCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VQRPLGAIGDPGPKLLLLRTHTG*RRHRPA
Trigger: TGCTGGACGGTGCCTCCTTCACCCTGTATGAGTTCT...AAGTAGCAATAATTTGGGTCCAGGGTCACCTATTGCCCCCAGAGGCCTCTGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp CAGGCCCAGAGAGGTCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTTGAACAAATTGTCGGTGAGATaGCCATCAATGCCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: QAQRGQGAQLQSGSQDLNKLSVR*PSMPLN
Trigger: GTTCAGCGGCATTGATGGGCATCTCACCGACAATTT...GTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGACCTCTCTGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR GCA 90 bp GTGTGCAGGTCTGGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGGGAAGAAGTTCAGCGATTCCAATaGAGCCAGCACCGGCCGGTA +
Preference number: 4 (lower is better)
Translates to: VCRSGSVVIHYPPGGWEEVQRFQ*SQHRPV
Trigger: TACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAAC...TTCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp TCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATACAAGTCCTGGTCTTTaGGCTGGGCTGGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: SHTALRMGGMRACKRYANTSPGL*AGLASP
Trigger: TGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT...ATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp CATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATGACCGTACTCCAGCTTGGTaGCATCCATGGCAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: HTALRMGGMRACKRYANDRTPAW*HPWQRA
Trigger: TGCTCGCTGCCATGGATGCCACCAAGCTGGAGTACG...GTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp TTCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATTGGCCAGGTCACCTTaGGGCTTCCCATACTGCCCT +
Preference number: 4 (lower is better)
Translates to: FPYCPENGWDEGMQTICKLARSP*GFPYCP
Trigger: AGGGCAGTATGGGAAGCCCCAAGGTGACCTGGCCAA...TTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp TCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTTGAACCCAAGCCCCTAGCTTTTCTAAATTGTCGGTaGGATGCCCATCAATGCCGC +
Preference number: 4 (lower is better)
Translates to: SRGTATKWEPGFEPKPLAFLNCR*DAHQCR
Trigger: GCGGCATTGATGGGCATCTCACCGACAATTTAGAAA...AGCTAGGGGCTTGGGTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR TCA 90 bp CCAGGCAGAAGCCAAAGTAGCTTGGAGGCTGAAGTGACAAACAATAAAATACAGGGCTCTGGGCCCCTGTaGAGTCCACATAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: PGRSQSSLEAEVTNNKIQGSGPL*SPHSSA
Trigger: TGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCC...CTGTATTTTATTGTTTGTCACTTCAGCCTCCAAGCTACTTTGGCTTCTGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp TCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATAGAACTCATACAGGGTaGAGGAGGCACCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SHTALRMGGMRACKRYANRTHTG*RRHRPA
Trigger: TGCTGGACGGTGCCTCCTTCACCCTGTATGAGTTCT...ATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR TCA 90 bp GGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACATAGCAGCGCAGGCTTGGAGGCTGAAGTaGCAAACAATAAAATACAGG +
Preference number: 4 (lower is better)
Translates to: GHMQTMALGPCEVHIAAQAWRLK*QTIKYR
Trigger: CCTGTATTTTATTGTTTGTCACTTCAGCCTCCAAGC...CTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR TCA 90 bp TTCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAAACTAGCCCCACAGGTTaGCAGCACCCTTACATACCG +
Preference number: 4 (lower is better)
Translates to: FPYCPENGWDEGMQTICKTSPTG*QHPYIP
Trigger: CGGTATGTAAGGGTGCTGTCAACCTGTGGGGCTAGT...TTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR TCA 90 bp GTGTGCAGGTCTGGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGGGAAGAACACGCTCTCTGCATCTaGCCTAGAGGAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VCRSGSVVIHYPPGGWEEHALCI*PRGSEA
Trigger: AGCCTCACTTCCTCTAGGTCAGATGCAGAGAGCGTG...TTCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR GCA 90 bp CATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATGACCAGGAGGCCTCATCCTaGCAGAACTCATACAGGGTG +
Preference number: 4 (lower is better)
Translates to: HTALRMGGMRACKRYANDQEASS*QNSYRV
Trigger: CACCCTGTATGAGTTCTGGCAGGATGAGGCCTCCTG...GTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp TTCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATGGGGCTTCCCATACTaGCCTGAGAATGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: FPYCPENGWDEGMQTICKWGFPY*PENGWD
Trigger: ATCCCACCCATTCTCAGGGCAGTATGGGAAGCCCCA...TTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp CATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATGACAAGCGCGTCACAAACTaGTCCACTTTGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: HTALRMGGMRACKRYANDKRVTN*STLEAL
Trigger: GAGGGCCTCCAAAGTGGACCAGTTTGTGACGCGCTT...GTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp CCAGGCAGAAGCCAAAGTAGCTTGGAGGCTGAAGTGACAAACAATAAAATACAGCCCTGCTTCTGCCGCTaGCTGAGGAGGAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PGRSQSSLEAEVTNNKIQPCFCR*LRRSRS
Trigger: GCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGG...CTGTATTTTATTGTTTGTCACTTCAGCCTCCAAGCTACTTTGGCTTCTGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp CCAGGCAGAAGCCAAAGTAGCTTGGAGGCTGAAGTGACAAACAATAAAATACAGTCTGCCACCTGGACCTaGCTCTGGGCCATGAGGATG +
Preference number: 4 (lower is better)
Translates to: PGRSQSSLEAEVTNNKIQSATWT*LWAMRM
Trigger: CATCCTCATGGCCCAGAGGCAGGTCCAGGTGGCAGA...CTGTATTTTATTGTTTGTCACTTCAGCCTCCAAGCTACTTTGGCTTCTGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp CCAGGCAGAAGCCAAAGTAGCTTGGAGGCTGAAGTGACAAACAATAAAATACAGTTGCTGCCAGGCGACTaGTGGTGCCTTCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PGRSQSSLEAEVTNNKIQLLPGD*WCLLQE
Trigger: CTCCTGGAGAAGGCACCAGCAGTCGCCTGGCAGCAA...CTGTATTTTATTGTTTGTCACTTCAGCCTCCAAGCTACTTTGGCTTCTGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CCA 90 bp TGCAGGTCTGGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGGGAAGAACACCAAACTGGTCCACTTTaGAGGCCCTCTCGTACTCCA +
Preference number: 4 (lower is better)
Translates to: CRSGSVVIHYPPGGWEEHQTGPL*RPSRTP
Trigger: TGGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTG...GTGTTCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CCA 90 bp CGTGTGCAGGTCTGGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGGGAAGACGGCGTGTGCAGGTCTaGCTCAGTTGTTATTCATTA +
Preference number: 4 (lower is better)
Translates to: RVQVWLSCYSLSTRRLGRRRVQV*LSCYSL
Trigger: TAATGAATAACAACTGAGCCAGACCTGCACACGCCG...TCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR TCA 90 bp TCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTTGAACCCAAGCCCCTAGCTGCAGCTCTATTGTTATaGTGGTTTACAGATGAGGAA +
Preference number: 4 (lower is better)
Translates to: SRGTATKWEPGFEPKPLAAALLL*WFTDEE
Trigger: TTCCTCATCTGTAAACCATCATAACAATAGAGCTGC...AGCTAGGGGCTTGGGTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR GCA 90 bp TCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATCATTCTTGTCTGCTCTaGGGAAAACGTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SHTALRMGGMRACKRYANHSCLL*GKRPGR
Trigger: TCTTCCAGGACGTTTTCCGCAGAGCAGACAAGAATG...ATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR GCA 90 bp CATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATGACATCATCATTCTTGTCTaGTCTGCGGAAAACGTCCTG +
Preference number: 4 (lower is better)
Translates to: HTALRMGGMRACKRYANDIIILV*SAENVL
Trigger: CAGGACGTTTTCCGCAGAGCAGACAAGAATGATGAT...GTCATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246190.11
ENST00000375238.8
CDS-3UTR CCA 90 bp CCAGGCAGAAGCCAAAGTAGCTTGGAGGCTGAAGTGACAAACAATAAAATACAGCAAATTATTGCTACTTaGCCAGGTCACCTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PGRSQSSLEAEVTNNKIQQIIAT*PGHLGA
Trigger: AGCCCCAAGGTGACCTGGCCAAGTAGCAATAATTTG...CTGTATTTTATTGTTTGTCACTTCAGCCTCCAAGCTACTTTGGCTTCTGCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS GCA 90 bp GCAGCCCCGCGCACGCCATGGCGCCGCCACCCGCTCGGGCTCGGCTaGGGTTGCTGCCGACCCTGGACGCCGCGGCGGACTCGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: AAPRTPWRRHPLGLG*GCCRPWTPRRTRCG
Trigger: GCCACACCGAGTCCGCCGCGGCGTCCAGGGTCGGCAGCAACCGCAGCCGAGCCCGAGCGGGTGGCGGCGCCATGGCGTGCGCGGGGCTGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246190.11
ENST00000375238.8
CDS-3UTR CAA 90 bp AGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAGCGGGCTCGGCTGCGGTaGCTGCCGACCCTGGACGCC +
Preference number: 5 (lower is better)
Translates to: SLVAWEGDGAPSSGPASERARLR*LPTLDA
Trigger: GGCGTCCAGGGTCGGCAGCAACCGCAGCCGAGCCCG...CTCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS TCA 90 bp CCCCCTGGACAAGCGGCAGCCGCTGGCCAACGCTGGGCAACGGATTaGCTACGCGTCCGGCGCTGGGCTGGGCTCCCCGGCGGCACCCAG +
Preference number: 5 (lower is better)
Translates to: PPGQAAAAGQRWATD*LRVRRWAGLPGGTQ
Trigger: CTGGGTGCCGCCGGGGAGCCCAGCCCAGCGCCGGACGCGTAGTCAATCCGTTGCCCAGCGTTGGCCAGCGGCTGCCGCTTGTCCAGGGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485976.5
CDS GCA 90 bp CTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCTGCTCTaGGCCTCCACGCTCTCTGCATCGCCAGCCATGGGCCTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: LRARRPARRLPQSLL*ASTLSASPAMGLGL
Trigger: GAGGCCCAGGCCCATGGCTGGCGATGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607805.5
CDS GCA 90 bp CACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCTaGTCTGCGCCTCCACGCTCTCTGCATCGCCAGCCATGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: HSSGLGVLPAGCRRA*SAPPRSLHRQPWAW
Trigger: CCAGGCCCATGGCTGGCGATGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607805.5
CDS-3UTR CAA 90 bp TGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTTCCAGCCGGGGGCGGGCTCGGCTGCGGTaGCTGCCGACCCTGGACGCC +
Preference number: 5 (lower is better)
Translates to: CKSGPLARSSSRRGSSRGRARLR*LPTLDA
Trigger: GGCGTCCAGGGTCGGCAGCAACCGCAGCCGAGCCCG...CCCCCGGCTGGAACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000607805.5
CDS CCA 90 bp TGGCCAACGCTGGGCAACGGATTGACTACGCGTCCGGCGCTGGGCTaGGCTCCCCGGCGGCACCCAGATTGCGCGGAGCGGGCGAAGGTA +
Preference number: 5 (lower is better)
Translates to: WPTLGNGLTTRPALG*APRRHPDCAERAKV
Trigger: TACCTTCGCCCGCTCCGCGCAATCTGGGTGCCGCCGGGGAGCCCAGCCCAGCGCCGGACGCGTAGTCAATCCGTTGCCCAGCGTTGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485976.5
CDS-3UTR CAA 90 bp GACCGGCTGACACTCCTCAGGGCTCGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCGAGCTCTGAAGGGCTaGCAGCTGGCTCACCGTCTC +
Preference number: 5 (lower is better)
Translates to: DRLTLLRARRPARRLPQSRALKG*QLAHRL
Trigger: GAGACGGTGAGCCAGCTGCAAGCCCTTCAGAGCTCG...GCTCTGCGGCAGCCGGCGGGCAGGACGCCGAGCCCTGAGGAGTGTCAGCCGGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000493590.1
CDS-3UTR CAA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCGGGCTCGGCTGCGGTaGCTGCCGACCCTGGACGCC +
Preference number: 5 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGRARLR*LPTLDA
Trigger: GGCGTCCAGGGTCGGCAGCAACCGCAGCCGAGCCCG...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CAA 90 bp ATGGCTCTGGGCCCCTGTGAAGTCCACATAGCAGCGCAGGGCTCGGTGGAAGTCCGGGCTCGGCTGCGGTaGCTGCCGACCCTGGACGCC +
Preference number: 5 (lower is better)
Translates to: MALGPCEVHIAAQGSVEVRARLR*LPTLDA
Trigger: GGCGTCCAGGGTCGGCAGCAACCGCAGCCGAGCCCG...GACTTCCACCGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CAA 90 bp GAGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGACTCTCGTACTCCAGCTaGGTGGCATCCATGGCAGCG +
Preference number: 5 (lower is better)
Translates to: EPSGLGGRRGTQLRPSLGLSYSS*VASMAA
Trigger: CGCTGCCATGGATGCCACCAAGCTGGAGTACGAGAG...TCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS TCA 90 bp ACTCCTGTGGGCCCTGGAAGGCGGTGCTCAGAGCCAGGATCGTGCTaGTTCTCCCCCTGGACAAGCGGCAGCCGCTGGCCAACGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TPVGPGRRCSEPGSC*FSPWTSGSRWPTLG
Trigger: GCCCAGCGTTGGCCAGCGGCTGCCGCTTGTCCAGGGGGAGAATCAGCACGATCCTGGCTCTGAGCACCGCCTTCCAGGGCCCACAGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485976.5
CDS CCA 90 bp GGCCCCACGGCCCTCACCTTGCACTCGAGCTGGTCGATGAGCTCCTaGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: GPTALTLHSSWSMSS*RRFTWSRHCISASE
Trigger: CTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTGCAAGGTGAGGGCCGTGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246190.11
ENST00000483813.5
CDS TCA 90 bp CCGGCTGCCGCAGAGCCTGCTCTGCGCCTCCACGCTCTCTGCATCTaGCCTAGAGGAAGTGAGGCTCACAGGGCCGAGGACGCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: PAAAEPALRLHALCI*PRGSEAHRAEDASH
Trigger: ATGGCTGGCGTCCTCGGCCCTGTGAGCCTCACTTCCTCTAGGTCAGATGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGGCAGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494174.5
CDS-3UTR CAA 90 bp CGGCCTCTGAGCTGCGCCCTGTGTCAGAAGAGCCGGGGGACCAGGTGGATGACCCGAGCTCTGAAGGGCTaGCAGCTGGCTCACCGTCTC +
Preference number: 5 (lower is better)
Translates to: RPLSCALCQKSRGTRWMTRALKG*QLAHRL
Trigger: GAGACGGTGAGCCAGCTGCAAGCCCTTCAGAGCTCG...GGTCATCCACCTGGTCCCCCGGCTCTTCTGACACAGGGCGCAGCTCAGAGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CAA 90 bp CCTCTGAGCTGCGCCCTGTGTCAGAAGAGCCGGGGGACCAGGTGGATGACCGGCTGCAAGTCAGGCCCCTaGGCCAGGTCCTCTTCACGC +
Preference number: 5 (lower is better)
Translates to: PLSCALCQKSRGTRWMTGCKSGP*ARSSSR
Trigger: GCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCA...GCCGGTCATCCACCTGGTCCCCCGGCTCTTCTGACACAGGGCGCAGCTCAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS CCA 90 bp GCCACCTGGACCTGCCTCTTGCACTCGAGCTGGTCGATGAGCTCCTaGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: ATWTCLLHSSWSMSS*RRFTWSRHCISASE
Trigger: CTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTGCAAGAGGCAGGTCCAGGTGGC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606690.5
CDS-3UTR CAA 90 bp CACTCGAGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCTGCAAGTCAGGCCCCTaGGCCAGGTCCTCTTCACGC +
Preference number: 5 (lower is better)
Translates to: HSSWSMSSWRRFTWSRHCCKSGP*ARSSSR
Trigger: GCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCA...GCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CAA 90 bp CAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGCTTGGCCAGGTCACCTaGGGGCTTCCCATACTGCCC +
Preference number: 5 (lower is better)
Translates to: QEESRTLARRPDGLRPTQLGQVT*GLPILP
Trigger: GGGCAGTATGGGAAGCCCCAAGGTGACCTGGCCAAG...CTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CAA 90 bp AGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAGCCAAATTATTGCTACTaGGCCAGGTCACCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: SLVAWEGDGAPSSGPASEPNYCY*ARSPWG
Trigger: GCCCCAAGGTGACCTGGCCAAGTAGCAATAATTTGG...CTCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CAA 90 bp TGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTTCCAGCCGGGGGGGGTACAATGGGCGCTaGTGCACTAGCCCCACAGGT +
Preference number: 5 (lower is better)
Translates to: CKSGPLARSSSRRGSSRGGYNGR*CTSPTG
Trigger: ACCTGTGGGGCTAGTGCACAAGCGCCCATTGTACCC...CCCCCGGCTGGAACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCA
66% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS TCA 90 bp CCTGGAAGGCGGTGCTCAGAGCCTGCAATTGGTGAGGTCAGCCCGTaGGGTCACAATGTTGCCAGGGCCCAGGGGGCAGAGCAGACGGAG +
Preference number: 5 (lower is better)
Translates to: PGRRCSEPAIGEVSP*GHNVARAQGAEQTE
Trigger: CTCCGTCTGCTCTGCCCCCTGGGCCCTGGCAACATTGTGACCTCACGGGCTGACCTCACCAATTGCAGGCTCTGAGCACCGCCTTCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000483813.5
ENST00000498353.5
ENST00000606525.5
CDS TCA 90 bp TACTCCTGTGGGCCCTGGAAGGCGGTGCTCAGAGCCTGCAATTGGTaGGGTCAGCCCGTGAGGTCACAATGTTGCCAGGGCCCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: YSCGPWKAVLRACNW*GQPVRSQCCQGPGG
Trigger: GCCCCCTGGGCCCTGGCAACATTGTGACCTCACGGGCTGACCTCACCAATTGCAGGCTCTGAGCACCGCCTTCCAGGGCCCACAGGAGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000483813.5
ENST00000498353.5
ENST00000606525.5
CDS GCA 90 bp CGGTTCATGCGTGTGCACCCCTGGGAGCAGGCACGGGAAGGAGCGTaGACACTCCTGCCAAGACGCGTAGATGTGGGAGCACACAAGGGG +
Preference number: 5 (lower is better)
Translates to: RFMRVHPWEQAREGA*TLLPRRVDVGAHKG
Trigger: CCCCTTGTGTGCTCCCACATCTACGCGTCTTGGCAGGAGTGTGCACGCTCCTTCCCGTGCCTGCTCCCAGGGGTGCACACGCATGAACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606699.5
CDS-3UTR CAA 90 bp GGCCCCTGTGAAGTCCACATAGCAGCGCAGGGCTCGGTGGAAGTCCTGCAGGCCCTCTCGTACTCCAGCTaGGTGGCATCCATGGCAGCG +
Preference number: 5 (lower is better)
Translates to: GPCEVHIAAQGSVEVLQALSYSS*VASMAA
Trigger: CGCTGCCATGGATGCCACCAAGCTGGAGTACGAGAG...GGCCTGCAGGACTTCCACCGAGCCCTGCGCTGCTATGTGGACTTCACAGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CAA 90 bp GAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGACACGAGCTCTGAAGGGCTaGCAGCTGGCTCACCGTCTC +
Preference number: 5 (lower is better)
Translates to: EESRTLARRPDGLRPTQTRALKG*QLAHRL
Trigger: GAGACGGTGAGCCAGCTGCAAGCCCTTCAGAGCTCG...TGTCTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CAA 90 bp GAGGCCCTCTCGTACTCCAGCTTGGTGGCATCCATGGCAGCGAGCACTGCACGGCGAGCTCTGAAGGGCTaGCAGCTGGCTCACCGTCTC +
Preference number: 5 (lower is better)
Translates to: EALSYSSLVASMAASTARRALKG*QLAHRL
Trigger: GAGACGGTGAGCCAGCTGCAAGCCCTTCAGAGCTCG...CCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGAGTACGAGAGGGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR CAA 90 bp GGCCATGAGGATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTGCAAGTCAGGCCCCTaGGCCAGGTCCTCTTCACGC +
Preference number: 5 (lower is better)
Translates to: GHEDVQVRPLGQVLFTQGCKSGP*ARSSSR
Trigger: GCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCA...CCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATCCTCATGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CAA 90 bp CACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCGACAAGTCCTGGTCTTaGCGCTGGGCTGGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: HQAQVQEETSPGLCAGLADKSWS*RWAGQS
Trigger: GGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTC...GGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CAA 90 bp ATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGCCTCTGAGGACAAGTCCTGGTCTTaGCGCTGGGCTGGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: MSSWRRFTWSRHCISASEDKSWS*RWAGQS
Trigger: GGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTC...CTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CAA 90 bp TTGCACTCGAGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGCCACCTTGGCCAGGTCACCTaGGGGCTTCCCATACTGCCC +
Preference number: 5 (lower is better)
Translates to: LHSSWSMSSWRRFTWSRHLGQVT*GLPILP
Trigger: GGGCAGTATGGGAAGCCCCAAGGTGACCTGGCCAAG...GTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS GCA 90 bp AGCCTGGGGTTCAGAGGCAGGCAGGGTCCCGGGGCCCTCGGCGTGTaGAGGTCTGGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SLGFRGRQGPGALGV*RSGSVVIHYPPGGW
Trigger: CCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCACACGCCGAGGGCCCCGGGACCCTGCCTGCCTCTGAACCCCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477778.5
CDS CCA 90 bp TGGGCCATGAGGATGTGCTTGCACTCGAGCTGGTCGATGAGCTCCTaGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: WAMRMCLHSSWSMSS*RRFTWSRHCISASE
Trigger: CTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTGCAAGCACATCCTCATGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439478.5
ENST00000463246.5
ENST00000485976.5
CDS CCA 90 bp TGCAGCTGGCTCACCGTCTCCCGCAGCAGGAAGCGCGTCACAAACTaGTCCACTTTGGAGGCCCTCTCGTACTCCTGTGGGCCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: CSWLTVSRSRKRVTN*STLEALSYSCGPWK
Trigger: CTTCCAGGGCCCACAGGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTGTGACGCGCTTCCTGCTGCGGGAGACGGTGAGCCAGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000478237.5
ENST00000483813.5
ENST00000485976.5
ENST00000498353.5
ENST00000606525.5
CDS CCA 90 bp TGCAGCTGGCTCACCGTCTCCCGCAGCAGGAAGCGCGTCACAAACTaGTCCACTTTGGAGGCCCTCTCGTACTCCACAAGGCCCCTTCGC +
Preference number: 5 (lower is better)
Translates to: CSWLTVSRSRKRVTN*STLEALSYSTRPLR
Trigger: GCGAAGGGGCCTTGTGGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTGTGACGCGCTTCCTGCTGCGGGAGACGGTGAGCCAGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480994.5
ENST00000606106.1
CDS CCA 90 bp AGGTCACAATGTTGCCAGGGCCCAGGGGGCAGAGCAGACGGAGTGTaGGCCATCGTCCCCAGTGGTGACCAGCCCTGCCATGGGAAACTA +
Preference number: 5 (lower is better)
Translates to: RSQCCQGPGGRADGV*AIVPSGDQPCHGKL
Trigger: TAGTTTCCCATGGCAGGGCTGGTCACCACTGGGGACGATGGCCCACACTCCGTCTGCTCTGCCCCCTGGGCCCTGGCAACATTGTGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000483813.5
ENST00000498353.5
ENST00000606525.5
CDS-3UTR CAA 90 bp CACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCCTCTCGTACTCCAGCTaGGTGGCATCCATGGCAGCG +
Preference number: 5 (lower is better)
Translates to: HQAQVQEETSPGLCAGLALSYSS*VASMAA
Trigger: CGCTGCCATGGATGCCACCAAGCTGGAGTACGAGAG...GGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CAA 90 bp GTGTCAGAAGAGCCGGGGGACCAGGTGGATGACCGGCTGACACTCCTCAGGGCTCTCTCGTACTCCAGCTaGGTGGCATCCATGGCAGCG +
Preference number: 5 (lower is better)
Translates to: VSEEPGDQVDDRLTLLRALSYSS*VASMAA
Trigger: CGCTGCCATGGATGCCACCAAGCTGGAGTACGAGAG...AGCCCTGAGGAGTGTCAGCCGGTCATCCACCTGGTCCCCCGGCTCTTCTGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000493590.1
CDS-3UTR CAA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCTGCAAGTCAGGCCCCTaGGCCAGGTCCTCTTCACGC +
Preference number: 5 (lower is better)
Translates to: QEETSPGLCAGLASPEGSCKSGP*ARSSSR
Trigger: GCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCA...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CAA 90 bp GCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCATGCAAGTCAGGCCCCTaGGCCAGGTCCTCTTCACGC +
Preference number: 5 (lower is better)
Translates to: AQVQEETSPGLCAGLASPCKSGP*ARSSSR
Trigger: GCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCA...TGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CAA 90 bp AGCCTAGTGGCCTGGGAGGGCGACGGGGCACCCAGCTCAGGCCCAGCCTCGGAGGCAGGTCTGGCTCAGTaGTTATTCATTATCCACCAG +
Preference number: 5 (lower is better)
Translates to: SLVAWEGDGAPSSGPASEAGLAQ*LFIIHQ
Trigger: CTGGTGGATAATGAATAACAACTGAGCCAGACCTGC...CTCCGAGGCTGGGCCTGAGCTGGGTGCCCCGTCGCCCTCCCAGGCCACTAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CAA 90 bp CAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCGACAAGTCCTGGTCTTaGCGCTGGGCTGGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: QEETSPGLCAGLASPEGSDKSWS*RWAGQS
Trigger: GGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTC...GGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CAA 90 bp GCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGACAAGTCCTGGTCTTaGCGCTGGGCTGGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: AWSQDSRKKAGPSLGGQMDKSWS*RWAGQS
Trigger: GGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTC...CATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CAA 90 bp CCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTTGGCCAGGTCACCTaGGGGCTTCCCATACTGCCC +
Preference number: 5 (lower is better)
Translates to: PFHQAQVQEETSPGLCAGLGQVT*GLPILP
Trigger: GGGCAGTATGGGAAGCCCCAAGGTGACCTGGCCAAG...CCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CAA 90 bp GTCCCTGAGCATCAGCCCTGCTTCTGCCGCTGGCTGAGGAGGAGCAGAAGCCTGGGACCACTGCCTTTATaGCCTCTGTGCTGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: VPEHQPCFCRWLRRSRSLGPLPL*PLCWGP
Trigger: GGGACCCCAGCACAGAGGCAATAAAGGCAGTGGTCC...CAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS GCA 90 bp AGCCACTCCACTCACCAGCTTGGTGGCATCCATGGCAGCGAGCACTaGACGGTTCAGCGATTCCAATGCAGCCAGCACCGGCCGGTAGAC +
Preference number: 5 (lower is better)
Translates to: SHSTHQLGGIHGSEH*TVQRFQCSQHRPVD
Trigger: GTCTACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGTGAGTGGAGTGGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS CCA 90 bp CCCAAGCAGGCCCGCAAGGAGAGGCCGGCTGACATGGACAAGGCCTaGTGGAAATCGTTCCTCAACCACCTCACTCGGAAGAAGCCGGCT +
Preference number: 5 (lower is better)
Translates to: PKQARKERPADMDKA*WKSFLNHLTRKKPA
Trigger: AGCCGGCTTCTTCCGAGTGAGGTGGTTGAGGAACGATTTCCACCAGGCCTTGTCCATGTCAGCCGGCCTCTCCTTGCGGGCCTGCTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606525.5
CDS-3UTR CAA 90 bp GGCCTTGCACTCGAGCTGGTCGATGAGCTCCTGGAGGCGGTTCACCTGGAGCCGACAAACTGGTCCACTTaGGAGGCCCTCTCGTACTCC +
Preference number: 5 (lower is better)
Translates to: GLALELVDELLEAVHLEPTNWST*EALSYS
Trigger: GGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTGT...CGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTGCAAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS-3UTR CAA 90 bp AGCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATCGAGCTCTGAAGGGCTaGCAGCTGGCTCACCGTCTC +
Preference number: 5 (lower is better)
Translates to: SLVPRQQEESRTLARRPDRALKG*QLAHRL
Trigger: GAGACGGTGAGCCAGCTGCAAGCCCTTCAGAGCTCG...ATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CAA 90 bp TGGTCGATGAGGATGCGCTGGAAGGCCTTGCTGCCAGGCGACTGCTGGTGCCTTGGACCACTGCCTTTATaGCCTCTGTGCTGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: WSMRMRWKALLPGDCWCLGPLPL*PLCWGP
Trigger: GGGACCCCAGCACAGAGGCAATAAAGGCAGTGGTCC...AAGGCACCAGCAGTCGCCTGGCAGCAAGGCCTTCCAGCGCATCCTCATCGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS GCA 90 bp AAAGGGGAGAAGGGAAGTAGAGGGAGTAACAGCGGTTCATGCGTGTaGACCCCTGGGAGCAGGCACGGGAAGGAGCGTGCACACTCCTGC +
Preference number: 5 (lower is better)
Translates to: KGEKGSRGSNSGSCV*TPGSRHGKERAHSC
Trigger: GCAGGAGTGTGCACGCTCCTTCCCGTGCCTGCTCCCAGGGGTGCACACGCATGAACCGCTGTTACTCCCTCTACTTCCCTTCTCCCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606699.5
CDS GCA 90 bp CTCAGGAAAGGGGAGAAGGGAAGTAGAGGGAGTAACAGCGGTTCATaGGTGTGCACCCCTGGGAGCAGGCACGGGAAGGAGCGTGCACAC +
Preference number: 5 (lower is better)
Translates to: LRKGEKGSRGSNSGS*VCTPGSRHGKERAH
Trigger: GTGTGCACGCTCCTTCCCGTGCCTGCTCCCAGGGGTGCACACGCATGAACCGCTGTTACTCCCTCTACTTCCCTTCTCCCCTTTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606699.5
CDS CCA 90 bp TGCAGCTGGCTCACCGTCTCCCGCAGCAGGAAGCGCGTCACAAACTaGTCCACTTTGGAGGCCCTCTCGTACTCCTGGGCTAAGGTCACA +
Preference number: 5 (lower is better)
Translates to: CSWLTVSRSRKRVTN*STLEALSYSWAKVT
Trigger: TGTGACCTTAGCCCAGGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTGTGACGCGCTTCCTGCTGCGGGAGACGGTGAGCCAGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463246.5
CDS CCA 90 bp GCCTCACAGTGGATCCCCCACCATCAGCCACTCCACTCACCAGCTTaGTGGCATCCATGGCAGCGAGCACTGCACGGTTCAGCGATTCCA +
Preference number: 5 (lower is better)
Translates to: ASQWIPHHQPLHSPA*WHPWQRALHGSAIP
Trigger: TGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGTGAGTGGAGTGGCTGATGGTGGGGGATCCACTGTGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS CCA 90 bp GCGCGTCACAAACTGGTCCACTTTGGAGGCCCTCTCGTACTCCTGTaGGCCCTGGAAGGCGGTGCTCAGAGCCAGGATCGTGCTGATTCT +
Preference number: 5 (lower is better)
Translates to: ARHKLVHFGGPLVLL*ALEGGAQSQDRADS
Trigger: AGAATCAGCACGATCCTGGCTCTGAGCACCGCCTTCCAGGGCCCACAGGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTGTGACGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485976.5
CDS CCA 90 bp TTCCTGGACCCCCACCCATCTACCCACCCTGGGATTCTGGCCCCCTaGAATTCCTCAGCAGCCAAGCAGGCCTTATATCCTGAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: FLDPHPSTHPGILAP*NSSAAKQALYPEPS
Trigger: GCTGGGCTCAGGATATAAGGCCTGCTTGGCTGCTGAGGAATTCCAGGGGGCCAGAATCCCAGGGTGGGTAGATGGGTGGGGGTCCAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000484824.2
ENST00000606699.5
CDS CCA 90 bp AAGAGGTGCTCAAGGGTTCCTGGACCCCCACCCATCTACCCACCCTaGGATTCTGGCCCCCTGGAATTCCTCAGCAGCCAAGCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: KRCSRVPGPPPIYPP*DSGPLEFLSSQAGL
Trigger: AAGGCCTGCTTGGCTGCTGAGGAATTCCAGGGGGCCAGAATCCCAGGGTGGGTAGATGGGTGGGGGTCCAGGAACCCTTGAGCACCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000484824.2
ENST00000606699.5
CDS CCA 90 bp GCTCTGAGAAGTAGTCTGCAGGCAGAAGAGGTGCTCAAGGGTTCCTaGACCCCCACCCATCTACCCACCCTGGGATTCTGGCCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: ALRSSLQAEEVLKGS*TPTHLPTLGFWPPG
Trigger: TCCAGGGGGCCAGAATCCCAGGGTGGGTAGATGGGTGGGGGTCCAGGAACCCTTGAGCACCTCTTCTGCCTGCAGACTACTTCTCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000484824.2
ENST00000606699.5
CDS CCA 90 bp AAGCAGGCCCGCAAGGAGAGGCCGGCTGACATGGACAAGGCCTGGTaGAAATCGTTCCTCAACCACCTCACTCGGAAGAAGCCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: KQARKERPADMDKAW*KSFLNHLTRKKPAV
Trigger: CACAGCCGGCTTCTTCCGAGTGAGGTGGTTGAGGAACGATTTCCACCAGGCCTTGTCCATGTCAGCCGGCCTCTCCTTGCGGGCCTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606525.5
CDS-3UTR CAA 90 bp ACCTGGAGCCGCCACTGCATCTCGGCCTCTGAGCTGCGCCCTGTGTCAGAAGAGACAAACTGGTCCACTTaGGAGGCCCTCTCGTACTCC +
Preference number: 5 (lower is better)
Translates to: TWSRHCISASELRPVSEETNWST*EALSYS
Trigger: GGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTGT...CTCTTCTGACACAGGGCGCAGCTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CAA 90 bp GGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACATAGCAGCGCAGCGAGCTCTGAAGGGCTaGCAGCTGGCTCACCGTCTC +
Preference number: 5 (lower is better)
Translates to: GHMQTMALGPCEVHIAAQRALKG*QLAHRL
Trigger: GAGACGGTGAGCCAGCTGCAAGCCCTTCAGAGCTCG...CTGCGCTGCTATGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS GCA 90 bp CTGAGTCAAGACTGTGGAGGATCCCACAGCACAGCAGATGCCCACTaGCTCACAGTGGATCCCCCACCATCAGCCACTCCACTCACCAGC +
Preference number: 5 (lower is better)
Translates to: LSQDCGGSHSTADAH*LTVDPPPSATPLTS
Trigger: GCTGGTGAGTGGAGTGGCTGATGGTGGGGGATCCACTGTGAGGCAGTGGGCATCTGCTGTGCTGTGGGATCCTCCACAGTCTTGACTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS GCA 90 bp CCTGCCAAGACGCGTAGATGTGGGAGCACACAAGGGGTAGATGGTTaGGTGTTTATGCACTGCATTCTCGGGTGGAAGCAGGCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: PAKTRRCGSTQGVDG*VFMHCILGWKQAGP
Trigger: GGGCCCCGCCTGCTTCCACCCGAGAATGCAGTGCATAAACACGCAACCATCTACCCCTTGTGTGCTCCCACATCTACGCGTCTTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606699.5
CDS CCA 90 bp ATCCCCCACCATCAGCCACTCCACTCACCAGCTTGGTGGCATCCATaGCAGCGAGCACTGCACGGTTCAGCGATTCCAATGCAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: IPHHQPLHSPAWWHP*QRALHGSAIPMQPA
Trigger: TGCTGGCTGCATTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGTGAGTGGAGTGGCTGATGGTGGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS CCA 90 bp ACTGTGGAGGATCCCACAGCACAGCAGATGCCCACTGCCTCACAGTaGATCCCCCACCATCAGCCACTCCACTCACCAGCTTGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: TVEDPTAQQMPTASQ*IPHHQPLHSPAWWH
Trigger: ATGCCACCAAGCTGGTGAGTGGAGTGGCTGATGGTGGGGGATCCACTGTGAGGCAGTGGGCATCTGCTGTGCTGTGGGATCCTCCACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS CCA 90 bp GTTCAGAGGCAGGCAGGGTCCCGGGGCCCTCGGCGTGTGCAGGTCTaGCTCAGTTGTTATTCATTATCCACCAGGAGGCTGGGAAGAACA +
Preference number: 5 (lower is better)
Translates to: VQRQAGSRGPRRVQV*LSCYSLSTRRLGRT
Trigger: TGTTCTTCCCAGCCTCCTGGTGGATAATGAATAACAACTGAGCCAGACCTGCACACGCCGAGGGCCCCGGGACCCTGCCTGCCTCTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477778.5
CDS CCA 90 bp CTCAAGGGTTCCTGGACCCCCACCCATCTACCCACCCTGGGATTCTaGCCCCCTGGAATTCCTCAGCAGCCAAGCAGGCCTTATATCCTG +
Preference number: 5 (lower is better)
Translates to: LKGSWTPTHLPTLGF*PPGIPQQPSRPYIL
Trigger: CAGGATATAAGGCCTGCTTGGCTGCTGAGGAATTCCAGGGGGCCAGAATCCCAGGGTGGGTAGATGGGTGGGGGTCCAGGAACCCTTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000484824.2
ENST00000606699.5
CDS-3UTR CAA 90 bp AGGCTCCAGGATGCTGGGACTGTGGGGATTTGGAATGGGGGTACAATGGGCGCTCTCTCGTACTCCAGCTaGGTGGCATCCATGGCAGCG +
Preference number: 5 (lower is better)
Translates to: RLQDAGTVGIWNGGTMGALSYSS*VASMAA
Trigger: CGCTGCCATGGATGCCACCAAGCTGGAGTACGAGAG...AGCGCCCATTGTACCCCCATTCCAAATCCCCACAGTCCCAGCATCCTGGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CAA 90 bp GTACTCCAGCTTGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCAGCGATTCCTCTCGTACTCCAGCTaGGTGGCATCCATGGCAGCG +
Preference number: 5 (lower is better)
Translates to: VLQLGGIHGSEHCTVQRFLSYSS*VASMAA
Trigger: CGCTGCCATGGATGCCACCAAGCTGGAGTACGAGAG...GAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGAGTAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR CAA 90 bp GGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTACAAACTGGTCCACTTaGGAGGCCCTCTCGTACTCC +
Preference number: 5 (lower is better)
Translates to: GLRALPPGPSPGGDKSWSTNWST*EALSYS
Trigger: GGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTGT...AGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CAA 90 bp GGTTCAGCGATTCCAATGCAGCCAGCACCGGCCGGTAGACACCCAGGTGCTCTGACAAACTGGTCCACTTaGGAGGCCCTCTCGTACTCC +
Preference number: 5 (lower is better)
Translates to: GSAIPMQPAPAGRHPGALTNWST*EALSYS
Trigger: GGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTGT...CAGAGCACCTGGGTGTCTACCGGCCGGTGCTGGCTGCATTGGAATCGCTGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR CAA 90 bp TTCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAACAGGAGGGTCCTCCCTaGTGGGGCCCTGGCCCCACG +
Preference number: 5 (lower is better)
Translates to: FPYCPENGWDEGMQTICKQEGPP*WGPGPT
Trigger: CGTGGGGCCAGGGCCCCACAAGGGAGGACCCTCCTG...TTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246190.11
CDS-3UTR CAA 90 bp GCTCCTGGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCGGCCTCTGAGCTGCGCAGGTCTGGCTCAGTaGTTATTCATTATCCACCAG +
Preference number: 5 (lower is better)
Translates to: APGGGSPGAATASRPLSCAGLAQ*LFIIHQ
Trigger: CTGGTGGATAATGAATAACAACTGAGCCAGACCTGC...GCAGCTCAGAGGCCGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CAA 90 bp TGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTTCCAGCCGGGGGAGAAGCCAAAGTAGCTaGGAGGCTGAAGTGACAAAC +
Preference number: 5 (lower is better)
Translates to: CKSGPLARSSSRRGSSRGRSQSS*EAEVTN
Trigger: GTTTGTCACTTCAGCCTCCAAGCTACTTTGGCTTCT...CCCCCGGCTGGAACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS TCA 90 bp CAAAAGGACCAAAGCACCCAAGCAGGCCCGCAAGGAGAGGCCGGCTaGCATGGACAAGGCCTGGTGGAAATCGTTCCTCAACCACCTCAC +
Preference number: 5 (lower is better)
Translates to: QKDQSTQAGPQGEAG*HGQGLVEIVPQPPH
Trigger: GTGAGGTGGTTGAGGAACGATTTCCACCAGGCCTTGTCCATGTCAGCCGGCCTCTCCTTGCGGGCCTGCTTGGGTGCTTTGGTCCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606525.5
CDS CCA 90 bp TCACAGTGGATCCCCCACCATCAGCCACTCCACTCACCAGCTTGGTaGCATCCATGGCAGCGAGCACTGCACGGTTCAGCGATTCCAATG +
Preference number: 5 (lower is better)
Translates to: SQWIPHHQPLHSPAW*HPWQRALHGSAIPM
Trigger: CATTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGTGAGTGGAGTGGCTGATGGTGGGGGATCCACTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR CAA 90 bp GCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGCCAAATTATTGCTACTaGGCCAGGTCACCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: ALPPGPSPGGDKSWSLRWPNYCY*ARSPWG
Trigger: GCCCCAAGGTGACCTGGCCAAGTAGCAATAATTTGG...CCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CAA 90 bp GCCCAAGTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCACCTGGACCCAAATTATaGCTACTTGGCCAGGTCACC +
Preference number: 5 (lower is better)
Translates to: AQVQEETSPGLCAGLASPPGPKL*LLGQVT
Trigger: GGTGACCTGGCCAAGTAGCAATAATTTGGGTCCAGG...TGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGACTTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CAA 90 bp TGGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCCCTGGACCCAAATTATaGCTACTTGGCCAGGTCACC +
Preference number: 5 (lower is better)
Translates to: WAESPSTRPKSRRRQVLVPGPKL*LLGQVT
Trigger: GGTGACCTGGCCAAGTAGCAATAATTTGGGTCCAGG...GACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS TCA 90 bp AGGGCCACGTACAGGAAGTGCCCATCACCATGCCAGGGTGCTGTGTaGAAGTCAGCCCCTATCTCCAGTCCGTGGCCAAACCACATTCTC +
Preference number: 5 (lower is better)
Translates to: RATYRKCPSPCQGAV*KSAPISSPWPNHIL
Trigger: GAGAATGTGGTTTGGCCACGGACTGGAGATAGGGGCTGACTTTCACACAGCACCCTGGCATGGTGATGGGCACTTCCTGTACGTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607055.1
CDS-3UTR CAA 90 bp GTCCCTGAGCATCAGCCCTGCTTCTGCCGCTGGCTGAGGAGGAGCAGAAGCCTGTTCCCATCATCATTCTaGTCTGCTCTGCGGAAAACG +
Preference number: 5 (lower is better)
Translates to: VPEHQPCFCRWLRRSRSLFPSSF*SALRKT
Trigger: CGTTTTCCGCAGAGCAGACAAGAATGATGATGGGAA...CAGGCTTCTGCTCCTCCTCAGCCAGCGGCAGAAGCAGGGCTGATGCTCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246190.11
ENST00000375238.8
CDS-3UTR CAA 90 bp GAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGACAAGAAGCCAAAGTAGCTaGGAGGCTGAAGTGACAAAC +
Preference number: 5 (lower is better)
Translates to: EESRTLARRPDGLRPTQTRSQSS*EAEVTN
Trigger: GTTTGTCACTTCAGCCTCCAAGCTACTTTGGCTTCT...TGTCTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CAA 90 bp AGCCTGGTCCCAAGACAGCAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATCCAAATTATTGCTACTaGGCCAGGTCACCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: SLVPRQQEESRTLARRPDPNYCY*ARSPWG
Trigger: GCCCCAAGGTGACCTGGCCAAGTAGCAATAATTTGG...ATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTGCTGTCTTGGGACCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CAA 90 bp CCATGGCAGCGAGCACTGCACGGTTCAGCGATTCCAATGCAGCCAGCACCGGCCCAAATGAGAGCATTCTaGTCTGCTCTGCGGAAAACG +
Preference number: 5 (lower is better)
Translates to: PWQRALHGSAIPMQPAPAQMRAF*SALRKT
Trigger: CGTTTTCCGCAGAGCAGACAAGAATGCTCTCATTTG...GGCCGGTGCTGGCTGCATTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CAA 90 bp GTACTCCAGCTTGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCAGCGATTCTGGGACTGTGGGGATTaGGAATGGGGGTACAATGGG +
Preference number: 5 (lower is better)
Translates to: VLQLGGIHGSEHCTVQRFWDCGD*EWGYNG
Trigger: CCCATTGTACCCCCATTCCAAATCCCCACAGTCCCA...GAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGAGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488489.5
CDS-3UTR CAA 90 bp GGGCCTGGGCCTCCAGGGTATCTGACGCCCCCTCCAGCGAGCTCTGAAGGGCTTCAAAGTAATTCATTCTaGTCTGCTCTGCGGAAAACG +
Preference number: 5 (lower is better)
Translates to: GPGPPGYLTPPPASSEGLQSNSF*SALRKT
Trigger: CGTTTTCCGCAGAGCAGACAAGAATGAATTACTTTG...AAGCCCTTCAGAGCTCGCTGGAGGGGGCGTCAGATACCCTGGAGGCCCAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493590.1
CDS GCA 90 bp TATAACCCTGAGTCAAGACTGTGGAGGATCCCACAGCACAGCAGATaGCCACTGCCTCACAGTGGATCCCCCACCATCAGCCACTCCACT +
Preference number: 5 (lower is better)
Translates to: YNPESRLWRIPQHSR*PLPHSGSPTISHST
Trigger: AGTGGAGTGGCTGATGGTGGGGGATCCACTGTGAGGCAGTGGGCATCTGCTGTGCTGTGGGATCCTCCACAGTCTTGACTCAGGGTTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR CAA 90 bp TTCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAACCCACGGCCCTCACCTaGCACTCGAGCTGGTCGATG +
Preference number: 5 (lower is better)
Translates to: FPYCPENGWDEGMQTICKPTALT*HSSWSM
Trigger: CATCGACCAGCTCGAGTGCAAGGTGAGGGCCGTGGG...TTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246190.11
CDS-3UTR CAA 90 bp TGGGCTGAGAGCCCTTCCACCAGGCCCAAGTCCAGGAGGAGACAAGTCCTGGTCGCAGGTCTGGCTCAGTaGTTATTCATTATCCACCAG +
Preference number: 5 (lower is better)
Translates to: WAESPSTRPKSRRRQVLVAGLAQ*LFIIHQ
Trigger: CTGGTGGATAATGAATAACAACTGAGCCAGACCTGC...GACCAGGACTTGTCTCCTCCTGGACTTGGGCCTGGTGGAAGGGCTCTCAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CAA 90 bp GTCCAGGAGGAGACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCGCAGGTCTGGCTCAGTaGTTATTCATTATCCACCAG +
Preference number: 5 (lower is better)
Translates to: VQEETSPGLCAGLASPEGAGLAQ*LFIIHQ
Trigger: CTGGTGGATAATGAATAACAACTGAGCCAGACCTGC...GCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGTCTCCTCCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CAA 90 bp CAGGAAGAAAGCAGGACCCTCGCTAGGCGGCCAGATGGCCTGAGGCCCACCCAGTTTTCTGTTTCTAAATaGTCGGTGAGATGCCCATCA +
Preference number: 5 (lower is better)
Translates to: QEESRTLARRPDGLRPTQFSVSK*SVRCPS
Trigger: TGATGGGCATCTCACCGACAATTTAGAAACAGAAAA...CTGGGTGGGCCTCAGGCCATCTGGCCGCCTAGCGAGGGTCCTGCTTTCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS TCA 90 bp CCCAGAGAGGTCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTTaGACCCAAGCCCCTAGCTCTATAACCCTGAGTCAAGACTGTGGA +
Preference number: 5 (lower is better)
Translates to: PREVKGHSYKVGARI*TQAPSSITLSQDCG
Trigger: TCCACAGTCTTGACTCAGGGTTATAGAGCTAGGGGCTTGGGTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGACCTCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR CAA 90 bp GATGTGCAAGTCAGGCCCCTTGGCCAGGTCCTCTTCACGCAGGGGTTCCAGCCGTTTTCTGTTTCTAAATaGTCGGTGAGATGCCCATCA +
Preference number: 5 (lower is better)
Translates to: DVQVRPLGQVLFTQGFQPFSVSK*SVRCPS
Trigger: TGATGGGCATCTCACCGACAATTTAGAAACAGAAAA...CGGCTGGAACCCCTGCGTGAAGAGGACCTGGCCAAGGGGCCTGACTTGCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS GCA 90 bp TATCTCCAGTCCGTGGCCAAACCACATTCTCTCCACTCTCCATCCTaGCAAACTTGGCTGAGAACAGCACTTCCTCTGGGAAGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: YLQSVAKPHSLHSPS*QTWLRTALPLGSAL
Trigger: CAAGGCACTTCCCAGAGGAAGTGCTGTTCTCAGCCAAGTTTGGCAGGATGGAGAGTGGAGAGAATGTGGTTTGGCCACGGACTGGAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607055.1
CDS-3UTR CAA 90 bp ACAAGTCCTGGTCTTTGCGCTGGGCTGGCCAGTCCAGAAGGCTCCAGAGGGAGGTTTTCTGTTTCTAAATaGTCGGTGAGATGCCCATCA +
Preference number: 5 (lower is better)
Translates to: TSPGLCAGLASPEGSRGRFSVSK*SVRCPS
Trigger: TGATGGGCATCTCACCGACAATTTAGAAACAGAAAA...CCTCCCTCTGGAGCCTTCTGGACTGGCCAGCCCAGCGCAAAGACCAGGACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000485399.5
ENST00000488489.5
CDS-3UTR CAA 90 bp GCCCTCTCGTACTCCAGCTTGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCTTTTCTGTTTCTAAATaGTCGGTGAGATGCCCATCA +
Preference number: 5 (lower is better)
Translates to: ALSYSSLVASMAASTARFFSVSK*SVRCPS
Trigger: TGATGGGCATCTCACCGACAATTTAGAAACAGAAAA...GAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGAGTACGAGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR CAA 90 bp TTCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAAACAAACTGGTCCACTTaGGAGGCCCTCTCGTACTCC +
Preference number: 5 (lower is better)
Translates to: FPYCPENGWDEGMQTICKTNWST*EALSYS
Trigger: GGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTGT...TTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CAA 90 bp CTCCAGCTTGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCAGCGATTCCAATTTTCTGTTTCTAAATaGTCGGTGAGATGCCCATCA +
Preference number: 5 (lower is better)
Translates to: LQLGGIHGSEHCTVQRFQFSVSK*SVRCPS
Trigger: TGATGGGCATCTCACCGACAATTTAGAAACAGAAAA...TTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488489.5
ENST00000493590.1
CDS-3UTR CAA 90 bp TCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATCCTGGACCCAAATTATaGCTACTTGGCCAGGTCACC +
Preference number: 5 (lower is better)
Translates to: SHTALRMGGMRACKRYANPGPKL*LLGQVT
Trigger: GGTGACCTGGCCAAGTAGCAATAATTTGGGTCCAGG...ATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS-3UTR CAA 90 bp CTTCTGGGCGGACACATGCAGACAATGGCTCTGGGCCCCTGTGAAGTCCACATATTTTCTGTTTCTAAATaGTCGGTGAGATGCCCATCA +
Preference number: 5 (lower is better)
Translates to: LLGGHMQTMALGPCEVHIFSVSK*SVRCPS
Trigger: TGATGGGCATCTCACCGACAATTTAGAAACAGAAAA...TATGTGGACTTCACAGGGGCCCAGAGCCATTGTCTGCATGTGTCCGCCCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000485399.5
ENST00000488489.5
ENST00000607805.5
CDS TCA 90 bp CCAAACTTGGCTGAGAACAGCACTTCCTCTGGGAAGTGCCTTGATTaGTTCTCCTGTTTTGGGCCCCCAAGATTTGTCTCAACTCTTGAC +
Preference number: 5 (lower is better)
Translates to: PNLAENSTSSGKCLD*FSCFGPPRFVSTLD
Trigger: GTCAAGAGTTGAGACAAATCTTGGGGGCCCAAAACAGGAGAATCAATCAAGGCACTTCCCAGAGGAAGTGCTGTTCTCAGCCAAGTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607055.1
CDS-3UTR CAA 90 bp CAGAGAGGTCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTTGAACCCAAGCTTTTCTGTTTCTAAATaGTCGGTGAGATGCCCATCA +
Preference number: 5 (lower is better)
Translates to: QRGQGAQLQSGSQDLNPSFSVSK*SVRCPS
Trigger: TGATGGGCATCTCACCGACAATTTAGAAACAGAAAA...GCTTGGGTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGACCTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS-3UTR CAA 90 bp TCCCATACTGCCCTGAGAATGGGTGGGATGAGGGCATGCAAACGATATGCAAATAGAAGCCAAAGTAGCTaGGAGGCTGAAGTGACAAAC +
Preference number: 5 (lower is better)
Translates to: SHTALRMGGMRACKRYANRSQSS*EAEVTN
Trigger: GTTTGTCACTTCAGCCTCCAAGCTACTTTGGCTTCT...ATTTGCATATCGTTTGCATGCCCTCATCCCACCCATTCTCAGGGCAGTATGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000488489.5
CDS GCA 90 bp CCAAACCACAGAAATCCCCCTCTATTCACCACTAAGCACCTTACATaGATTGCCTCATTTATGATCATTAGCCCAGTTTTACAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: PNHRNPPLFTTKHLT*IASFMIISPVLQLR
Trigger: TCTCAGCTGTAAAACTGGGCTAATGATCATAAATGAGGCAATGCATGTAAGGTGCTTAGTGGTGAATAGAGGGGGATTTCTGTGGTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463246.5
CDS GCA 72 bp TGGCGCCGCCACCCGCTCGGGCTCGGCTGCGGTTGCTaGCGACCCTGGACGCCGCGGCGGACTCGGTGTGGC +
Preference number: 6 (lower is better)
Translates to: WRRHPLGLGCGC*RPWTPRRTRCG
Trigger: GCCACACCGAGTCCGCCGCGGCGTCCAGGGTCGGCAGCAACCGCAGCCGAGCCCGAGCGGGTGGCGGCGCCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246190.11
ENST00000375238.8
CDS GCA 72 bp CGCACGCCATGGCGCCGCCACCCGCTCGGGCTCGGCTaGGGTTGCTGCCGACCCTGGACGCCGCGGCGGACT +
Preference number: 6 (lower is better)
Translates to: RTPWRRHPLGLG*GCCRPWTPRRT
Trigger: AGTCCGCCGCGGCGTCCAGGGTCGGCAGCAACCGCAGCCGAGCCCGAGCGGGTGGCGGCGCCATGGCGTGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000484824.2
ENST00000488489.5
ENST00000606699.5
CDS CAA 72 bp GCCATGGCGCCGCCACCCGCTCGGGCTCGGCTGCGGTaGCTGCCGACCCTGGACGCCGCGGCGGACTCGGTG +
Preference number: 6 (lower is better)
Translates to: AMAPPPARARLR*LPTLDAAADSV
Trigger: CACCGAGTCCGCCGCGGCGTCCAGGGTCGGCAGCAACCGCAGCCGAGCCCGAGCGGGTGGCGGCGCCATGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000484824.2
ENST00000488489.5
ENST00000606699.5
CDS CAA 90 bp CCCGCGCACGCCATGGCGCCGCCACCCGCTCGGGCTCGGCTGCGGTaGCTGCCGACCCTGGACGCCGCGGCGGACTCGGTGTGGCTAGAG +
Preference number: 6 (lower is better)
Translates to: PAHAMAPPPARARLR*LPTLDAAADSVWLE
Trigger: CTCTAGCCACACCGAGTCCGCCGCGGCGTCCAGGGTCGGCAGCAACCGCAGCCGAGCCCGAGCGGGTGGCGGCGCCATGGCGTGCGCGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246190.11
ENST00000375238.8
CDS GCA 72 bp CCATGGCGCCGCCACCCGCTCGGGCTCGGCTGCGGTTaGTGCCGACCCTGGACGCCGCGGCGGACTCGGTGT +
Preference number: 6 (lower is better)
Translates to: PWRRHPLGLGCG*CRPWTPRRTRC
Trigger: ACACCGAGTCCGCCGCGGCGTCCAGGGTCGGCAGCAACCGCAGCCGAGCCCGAGCGGGTGGCGGCGCCATGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246190.11
ENST00000375238.8
ENST00000484824.2
ENST00000488489.5
ENST00000606699.5
CDS CCA 72 bp TTGCTGCCGACCCTGGACGCCGCGGCGGACTCGGTGTaGCTAGAGGCCGCCCCTTGGCGCCGGCGCCGACGC +
Preference number: 6 (lower is better)
Translates to: LLPTLDAAADSV*LEAAPWRRRRR
Trigger: GCGTCGGCGCCGGCGCCAAGGGGCGGCCTCTAGCCACACCGAGTCCGCCGCGGCGTCCAGGGTCGGCAGCAA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375238.8
CDS GCA 72 bp CGGCGTCCTGCCCGCCGGCTGCCGCAGAGCCTGCTCTaGGCCTCCACGCTCTCTGCATCGCCAGCCATGGGC +
Preference number: 6 (lower is better)
Translates to: RRPARRLPQSLL*ASTLSASPAMG
Trigger: GCCCATGGCTGGCGATGCAGAGAGCGTGGAGGCGCAGAGCAGGCTCTGCGGCAGCCGGCGGGCAGGACGCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607805.5
CDS TCA 72 bp CAAGCGGCAGCCGCTGGCCAACGCTGGGCAACGGATTaGCTACGCGTCCGGCGCTGGGCTGGGCTCCCCGGC +
Preference number: 6 (lower is better)
Translates to: QAAAAGQRWATD*LRVRRWAGLPG
Trigger: GCCGGGGAGCCCAGCCCAGCGCCGGACGCGTAGTCAATCCGTTGCCCAGCGTTGGCCAGCGGCTGCCGCTTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485976.5
CDS GCA 72 bp GCGGAGCGGGCGAAGGTAGCGAGCGCGAGCCGAGGATaGCGGTACTGCTGCTGCTGCGGCGGCAAGAGGCGC +
Preference number: 6 (lower is better)
Translates to: AERAKVASASRG*RYCCCCGGKRR
Trigger: GCGCCTCTTGCCGCCGCAGCAGCAGCAGTACCGGCATCCTCGGCTCGCGCTCGCTACCTTCGCCCGCTCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485976.5
CDS CCA 72 bp CTGGGCAACGGATTGACTACGCGTCCGGCGCTGGGCTaGGCTCCCCGGCGGCACCCAGATTGCGCGGAGCGG +
Preference number: 6 (lower is better)
Translates to: LGNGLTTRPALG*APRRHPDCAER
Trigger: CCGCTCCGCGCAATCTGGGTGCCGCCGGGGAGCCCAGCCCAGCGCCGGACGCGTAGTCAATCCGTTGCCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485976.5
CDS CAA 90 bp TCCCCCTGGACAAGCGGCAGCCGCTGGCCAACGCTGGGCAACGGATaGACTACGCGTCCGGCGCTGGGCTGGGCTCCCCGGCGGCACCCA +
Preference number: 6 (lower is better)
Translates to: SPWTSGSRWPTLGNG*TTRPALGWAPRRHP
Trigger: TGGGTGCCGCCGGGGAGCCCAGCCCAGCGCCGGACGCGTAGTCAATCCGTTGCCCAGCGTTGGCCAGCGGCTGCCGCTTGTCCAGGGGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485976.5
CDS CAA 72 bp ACAAGCGGCAGCCGCTGGCCAACGCTGGGCAACGGATaGACTACGCGTCCGGCGCTGGGCTGGGCTCCCCGG +
Preference number: 6 (lower is better)
Translates to: TSGSRWPTLGNG*TTRPALGWAPR
Trigger: CCGGGGAGCCCAGCCCAGCGCCGGACGCGTAGTCAATCCGTTGCCCAGCGTTGGCCAGCGGCTGCCGCTTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485976.5
CDS TCA 72 bp AGGACGCCAGCCATGGGCCTGGGCCTCCAGGGTATCTaGCGCCCCCTCCAGCGAGCTCTGAAGGGCTTGCAG +
Preference number: 6 (lower is better)
Translates to: RTPAMGLGLQGI*RPLQRALKGLQ
Trigger: CTGCAAGCCCTTCAGAGCTCGCTGGAGGGGGCGTCAGATACCCTGGAGGCCCAGGCCCATGGCTGGCGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494174.5
CDS TCA 72 bp GGCCCTGGAAGGCGGTGCTCAGAGCCAGGATCGTGCTaGTTCTCCCCCTGGACAAGCGGCAGCCGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: GPGRRCSEPGSC*FSPWTSGSRWP
Trigger: TGGCCAGCGGCTGCCGCTTGTCCAGGGGGAGAATCAGCACGATCCTGGCTCTGAGCACCGCCTTCCAGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485976.5
CDS TCA 72 bp GCATCGCCAGCCATGGGCCTGGGCCTCCAGGGTATCTaGCGCCCCCTCCAGCGAGCTCTGAAGGGCTTGCAG +
Preference number: 6 (lower is better)
Translates to: ASPAMGLGLQGI*RPLQRALKGLQ
Trigger: CTGCAAGCCCTTCAGAGCTCGCTGGAGGGGGCGTCAGATACCCTGGAGGCCCAGGCCCATGGCTGGCGATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607805.5
CDS CCA 72 bp TGTTGCCAGGGCCCAGGGGGCAGAGCAGACGGAGTGTaGGCCATCGTCCCCAGTGGTGACCAGCCCTGCCAT +
Preference number: 6 (lower is better)
Translates to: CCQGPGGRADGV*AIVPSGDQPCH
Trigger: ATGGCAGGGCTGGTCACCACTGGGGACGATGGCCCACACTCCGTCTGCTCTGCCCCCTGGGCCCTGGCAACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000483813.5
ENST00000498353.5
ENST00000606525.5
CDS CCA 72 bp GCCCTCACCTTGCACTCGAGCTGGTCGATGAGCTCCTaGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCG +
Preference number: 6 (lower is better)
Translates to: ALTLHSSWSMSS*RRFTWSRHCIS
Trigger: CGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTGCAAGGTGAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246190.11
ENST00000483813.5
CDS TCA 72 bp CGGTGCTCAGAGCCTGCAATTGGTGAGGTCAGCCCGTaGGGTCACAATGTTGCCAGGGCCCAGGGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: RCSEPAIGEVSP*GHNVARAQGAE
Trigger: CTCTGCCCCCTGGGCCCTGGCAACATTGTGACCTCACGGGCTGACCTCACCAATTGCAGGCTCTGAGCACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000483813.5
ENST00000498353.5
ENST00000606525.5
CDS TCA 72 bp GGGCCCTGGAAGGCGGTGCTCAGAGCCTGCAATTGGTaGGGTCAGCCCGTGAGGTCACAATGTTGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: GPWKAVLRACNW*GQPVRSQCCQG
Trigger: GCCCTGGCAACATTGTGACCTCACGGGCTGACCTCACCAATTGCAGGCTCTGAGCACCGCCTTCCAGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483813.5
ENST00000498353.5
ENST00000606525.5
CDS CCA 72 bp TCCTGCAGGCCTTCCTCTGCCACCTGGACCTGCCTCTaGGCCATGAGGATGTGCTTGCACTCGAGCTGGTCG +
Preference number: 6 (lower is better)
Translates to: SCRPSSATWTCL*AMRMCLHSSWS
Trigger: CGACCAGCTCGAGTGCAAGCACATCCTCATGGCCCAGAGGCAGGTCCAGGTGGCAGAGGAAGGCCTGCAGGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439478.5
ENST00000463246.5
ENST00000485976.5
CDS CCA 72 bp ACCTGCCTCTTGCACTCGAGCTGGTCGATGAGCTCCTaGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCG +
Preference number: 6 (lower is better)
Translates to: TCLLHSSWSMSS*RRFTWSRHCIS
Trigger: CGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTGCAAGAGGCAGGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606690.5
CDS CAA 90 bp CTCGTACTCCTGTGGGCCCTGGAAGGCGGTGCTCAGAGCCTGCAATaGGTGAGGTCAGCCCGTGAGGTCACAATGTTGCCAGGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: LVLLWALEGGAQSLQ*VRSAREVTMLPGPR
Trigger: CCTGGGCCCTGGCAACATTGTGACCTCACGGGCTGACCTCACCAATTGCAGGCTCTGAGCACCGCCTTCCAGGGCCCACAGGAGTACGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483813.5
ENST00000498353.5
ENST00000606525.5
CDS CCA 72 bp AGGATGTGCTTGCACTCGAGCTGGTCGATGAGCTCCTaGAGGCGGTTCACCTGGAGCCGCCACTGCATCTCG +
Preference number: 6 (lower is better)
Translates to: RMCLHSSWSMSS*RRFTWSRHCIS
Trigger: CGAGATGCAGTGGCGGCTCCAGGTGAACCGCCTCCAGGAGCTCATCGACCAGCTCGAGTGCAAGCACATCCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439478.5
ENST00000463246.5
ENST00000485976.5
CDS CCA 72 bp CTCACCGTCTCCCGCAGCAGGAAGCGCGTCACAAACTaGTCCACTTTGGAGGCCCTCTCGTACTCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: LTVSRSRKRVTN*STLEALSYSWA
Trigger: AGCCCAGGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTGTGACGCGCTTCCTGCTGCGGGAGACGGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463246.5
CDS CCA 72 bp CTCACCGTCTCCCGCAGCAGGAAGCGCGTCACAAACTaGTCCACTTTGGAGGCCCTCTCGTACTCCTGTGGG +
Preference number: 6 (lower is better)
Translates to: LTVSRSRKRVTN*STLEALSYSCG
Trigger: CCCACAGGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTGTGACGCGCTTCCTGCTGCGGGAGACGGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000478237.5
ENST00000483813.5
ENST00000485976.5
ENST00000498353.5
ENST00000606525.5
CDS CAA 90 bp TGCCTCACAGTGGATCCCCCACCATCAGCCACTCCACTCACCAGCTaGGTGGCATCCATGGCAGCGAGCACTGCACGGTTCAGCGATTCC +
Preference number: 6 (lower is better)
Translates to: CLTVDPPPSATPLTS*VASMAASTARFSDS
Trigger: GGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGTGAGTGGAGTGGCTGATGGTGGGGGATCCACTGTGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS GCA 72 bp ACTCACCAGCTTGGTGGCATCCATGGCAGCGAGCACTaGACGGTTCAGCGATTCCAATGCAGCCAGCACCGG +
Preference number: 6 (lower is better)
Translates to: THQLGGIHGSEH*TVQRFQCSQHR
Trigger: CCGGTGCTGGCTGCATTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGTGAGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS GCA 72 bp GACTGTGGAGGATCCCACAGCACAGCAGATGCCCACTaGCTCACAGTGGATCCCCCACCATCAGCCACTCCA +
Preference number: 6 (lower is better)
Translates to: DCGGSHSTADAH*LTVDPPPSATP
Trigger: TGGAGTGGCTGATGGTGGGGGATCCACTGTGAGGCAGTGGGCATCTGCTGTGCTGTGGGATCCTCCACAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS GCA 72 bp AAGGGAAGTAGAGGGAGTAACAGCGGTTCATGCGTGTaGACCCCTGGGAGCAGGCACGGGAAGGAGCGTGCA +
Preference number: 6 (lower is better)
Translates to: KGSRGSNSGSCV*TPGSRHGKERA
Trigger: TGCACGCTCCTTCCCGTGCCTGCTCCCAGGGGTGCACACGCATGAACCGCTGTTACTCCCTCTACTTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606699.5
CDS CCA 72 bp CTCACCGTCTCCCGCAGCAGGAAGCGCGTCACAAACTaGTCCACTTTGGAGGCCCTCTCGTACTCCACAAGG +
Preference number: 6 (lower is better)
Translates to: LTVSRSRKRVTN*STLEALSYSTR
Trigger: CCTTGTGGAGTACGAGAGGGCCTCCAAAGTGGACCAGTTTGTGACGCGCTTCCTGCTGCGGGAGACGGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480994.5
ENST00000606106.1
CDS CCA 72 bp TCCACTTTGGAGGCCCTCTCGTACTCCTGTGGGCCCTaGAAGGCGGTGCTCAGAGCCAGGATCGTGCTGATT +
Preference number: 6 (lower is better)
Translates to: STLEALSYSCGP*KAVLRARIVLI
Trigger: AATCAGCACGATCCTGGCTCTGAGCACCGCCTTCCAGGGCCCACAGGAGTACGAGAGGGCCTCCAAAGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485976.5
CDS CCA 72 bp GCCCGCAAGGAGAGGCCGGCTGACATGGACAAGGCCTaGTGGAAATCGTTCCTCAACCACCTCACTCGGAAG +
Preference number: 6 (lower is better)
Translates to: ARKERPADMDKA*WKSFLNHLTRK
Trigger: CTTCCGAGTGAGGTGGTTGAGGAACGATTTCCACCAGGCCTTGTCCATGTCAGCCGGCCTCTCCTTGCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606525.5
CDS CAA 72 bp CTGTGGGCCCTGGAAGGCGGTGCTCAGAGCCTGCAATaGGTGAGGTCAGCCCGTGAGGTCACAATGTTGCCA +
Preference number: 6 (lower is better)
Translates to: LWALEGGAQSLQ*VRSAREVTMLP
Trigger: TGGCAACATTGTGACCTCACGGGCTGACCTCACCAATTGCAGGCTCTGAGCACCGCCTTCCAGGGCCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483813.5
ENST00000498353.5
ENST00000606525.5
CDS TCA 72 bp CAGAGCAGACGGAGTGTGGGCCATCGTCCCCAGTGGTaGCCAGCCCTGCCATGGGAAACTATAGTTCCCACA +
Preference number: 6 (lower is better)
Translates to: QSRRSVGHRPQW*PALPWETIVPT
Trigger: TGTGGGAACTATAGTTTCCCATGGCAGGGCTGGTCACCACTGGGGACGATGGCCCACACTCCGTCTGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483813.5
ENST00000498353.5
ENST00000606525.5
CDS TCA 72 bp CAAAGCACCCAAGCAGGCCCGCAAGGAGAGGCCGGCTaGCATGGACAAGGCCTGGTGGAAATCGTTCCTCAA +
Preference number: 6 (lower is better)
Translates to: QSTQAGPQGEAG*HGQGLVEIVPQ
Trigger: TTGAGGAACGATTTCCACCAGGCCTTGTCCATGTCAGCCGGCCTCTCCTTGCGGGCCTGCTTGGGTGCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606525.5
CDS GCA 72 bp GAGTCAAGACTGTGGAGGATCCCACAGCACAGCAGATaGCCACTGCCTCACAGTGGATCCCCCACCATCAGC +
Preference number: 6 (lower is better)
Translates to: ESRLWRIPQHSR*PLPHSGSPTIS
Trigger: GCTGATGGTGGGGGATCCACTGTGAGGCAGTGGGCATCTGCTGTGCTGTGGGATCCTCCACAGTCTTGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS GCA 72 bp TTCAGAGGCAGGCAGGGTCCCGGGGCCCTCGGCGTGTaGAGGTCTGGCTCAGTTGTTATTCATTATCCACCA +
Preference number: 6 (lower is better)
Translates to: FRGRQGPGALGV*RSGSVVIHYPP
Trigger: TGGTGGATAATGAATAACAACTGAGCCAGACCTGCACACGCCGAGGGCCCCGGGACCCTGCCTGCCTCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477778.5
CDS GCA 72 bp TGGGACCCAGGGGAAGCCACACTCACCATTCTTGTCTaGTCTGCGGAAAACGTCCTGGAAGAGCGTGTGTCC +
Preference number: 6 (lower is better)
Translates to: WDPGEATLTILV*SAENVLEERVS
Trigger: GGACACACGCTCTTCCAGGACGTTTTCCGCAGAGCAGACAAGAATGGTGAGTGTGGCTTCCCCTGGGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607055.1
CDS CCA 72 bp CATCAGCCACTCCACTCACCAGCTTGGTGGCATCCATaGCAGCGAGCACTGCACGGTTCAGCGATTCCAATG +
Preference number: 6 (lower is better)
Translates to: HQPLHSPAWWHP*QRALHGSAIPM
Trigger: CATTGGAATCGCTGAACCGTGCAGTGCTCGCTGCCATGGATGCCACCAAGCTGGTGAGTGGAGTGGCTGATG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS CCA 72 bp CGCAAGGAGAGGCCGGCTGACATGGACAAGGCCTGGTaGAAATCGTTCCTCAACCACCTCACTCGGAAGAAG +
Preference number: 6 (lower is better)
Translates to: RKERPADMDKAW*KSFLNHLTRKK
Trigger: CTTCTTCCGAGTGAGGTGGTTGAGGAACGATTTCCACCAGGCCTTGTCCATGTCAGCCGGCCTCTCCTTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606525.5
CDS CAA 72 bp CACTGTGGGACCCAGGGGAAGCCACACTCACCATTCTaGTCTGCTCTGCGGAAAACGTCCTGGAAGAGCGTG +
Preference number: 6 (lower is better)
Translates to: HCGTQGKPHSPF*SALRKTSWKSV
Trigger: CACGCTCTTCCAGGACGTTTTCCGCAGAGCAGACAAGAATGGTGAGTGTGGCTTCCCCTGGGTCCCACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607055.1
CDS TCA 72 bp TACAGGAAGTGCCCATCACCATGCCAGGGTGCTGTGTaGAAGTCAGCCCCTATCTCCAGTCCGTGGCCAAAC +
Preference number: 6 (lower is better)
Translates to: YRKCPSPCQGAV*KSAPISSPWPN
Trigger: GTTTGGCCACGGACTGGAGATAGGGGCTGACTTTCACACAGCACCCTGGCATGGTGATGGGCACTTCCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607055.1
CDS TCA 72 bp GGGGTGAGGGAGGAATTCGAAAATCTCTCCCAAGGATaGGGATCCCAGGAGCCCATATGGGTGTGGATGGGG +
Preference number: 6 (lower is better)
Translates to: GVREEFENLSQG*GSQEPIWVWMG
Trigger: CCCCATCCACACCCATATGGGCTCCTGGGATCCTCATCCTTGGGAGAGATTTTCGAATTCCTCCCTCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606525.5
CDS GCA 72 bp ACGCGTAGATGTGGGAGCACACAAGGGGTAGATGGTTaGGTGTTTATGCACTGCATTCTCGGGTGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: TRRCGSTQGVDG*VFMHCILGWKQ
Trigger: CTGCTTCCACCCGAGAATGCAGTGCATAAACACGCAACCATCTACCCCTTGTGTGCTCCCACATCTACGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606699.5
CDS TCA 72 bp GTCAAGGGGCACAGCTACAAAGTGGGAGCCAGGATTTaGACCCAAGCCCCTAGCTCTATAACCCTGAGTCAA +
Preference number: 6 (lower is better)
Translates to: VKGHSYKVGARI*TQAPSSITLSQ
Trigger: TTGACTCAGGGTTATAGAGCTAGGGGCTTGGGTTCAAATCCTGGCTCCCACTTTGTAGCTGTGCCCCTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473892.1
CDS CAA 90 bp AGAACAGCACTTCCTCTGGGAAGTGCCTTGATTGATTCTCCTGTTTaGGGCCCCCAAGATTTGTCTCAACTCTTGACTTCCCACCCAACC +
Preference number: 6 (lower is better)
Translates to: RTALPLGSALIDSPV*GPQDLSQLLTSHPT
Trigger: GGTTGGGTGGGAAGTCAAGAGTTGAGACAAATCTTGGGGGCCCAAAACAGGAGAATCAATCAAGGCACTTCCCAGAGGAAGTGCTGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607055.1
CDS CAA 90 bp TCCTGCCAAACTTGGCTGAGAACAGCACTTCCTCTGGGAAGTGCCTaGATTGATTCTCCTGTTTTGGGCCCCCAAGATTTGTCTCAACTC +
Preference number: 6 (lower is better)
Translates to: SCQTWLRTALPLGSA*IDSPVLGPQDLSQL
Trigger: GAGTTGAGACAAATCTTGGGGGCCCAAAACAGGAGAATCAATCAAGGCACTTCCCAGAGGAAGTGCTGTTCTCAGCCAAGTTTGGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607055.1
CDS TCA 72 bp GCTGAGAACAGCACTTCCTCTGGGAAGTGCCTTGATTaGTTCTCCTGTTTTGGGCCCCCAAGATTTGTCTCA +
Preference number: 6 (lower is better)
Translates to: AENSTSSGKCLD*FSCFGPPRFVS
Trigger: TGAGACAAATCTTGGGGGCCCAAAACAGGAGAATCAATCAAGGCACTTCCCAGAGGAAGTGCTGTTCTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607055.1
CDS CAA 72 bp GCCTTGATTGATTCTCCTGTTTTGGGCCCCCAAGATTaGTCTCAACTCTTGACTTCCCACCCAACCTCCCAA +
Preference number: 6 (lower is better)
Translates to: ALIDSPVLGPQD*SQLLTSHPTSQ
Trigger: TTGGGAGGTTGGGTGGGAAGTCAAGAGTTGAGACAAATCTTGGGGGCCCAAAACAGGAGAATCAATCAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607055.1
CDS CAA 72 bp CTTCCTCTGGGAAGTGCCTTGATTGATTCTCCTGTTTaGGGCCCCCAAGATTTGTCTCAACTCTTGACTTCC +
Preference number: 6 (lower is better)
Translates to: LPLGSALIDSPV*GPQDLSQLLTS
Trigger: GGAAGTCAAGAGTTGAGACAAATCTTGGGGGCCCAAAACAGGAGAATCAATCAAGGCACTTCCCAGAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607055.1
CDS CAA 72 bp CAAAGTAATTCTGGAATTCCTCAAATGAGAGCATTCTaGTCTGCTCTGCGGAAAACGTCCTGGAAGAGCGTG +
Preference number: 6 (lower is better)
Translates to: QSNSGIPQMRAF*SALRKTSWKSV
Trigger: CACGCTCTTCCAGGACGTTTTCCGCAGAGCAGACAAGAATGCTCTCATTTGAGGAATTCCAGAATTACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488489.5