RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NEBL (Homo sapiens)

Ensembl gene IDs: ENSG00000078114

Ensembl transcript IDs: ENST00000377119.5, ENST00000377122.9, ENST00000417816.2, ENST00000434381.1, ENST00000460652.1, ENST00000464278.1, ENST00000473616.5, ENST00000481592.5, ENST00000482754.1, ENST00000485750.1, ENST00000493005.5, ENST00000498424.2, ENST00000529198.1, ENST00000534331.7, ENST00000649437.1, ENST00000674540.1, ENST00000675114.1, ENST00000675700.1, ENST00000675702.1, ENST00000675747.1, ENST00000676125.1

Found 637 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGGACTaGAGACTCTGGATGAAATTTCAAGACCCACCAGCAAGGGCTAGC +
Preference number: 1 (lower is better)
Translates to: KHRVADGCRWLGDLD*RLWMKFQDPPARAS
Trigger: GCTAGCCCTTGCTGGTGGGTCTTGAAATTTCATCCAGAGTCTGCAGTCCAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR CCA 90 bp GTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGGACTGCAGACTCTaGATGAAATTTCAAGACCCACCAGCAAGGGCTAGCATAAAGCCT +
Preference number: 1 (lower is better)
Translates to: VADGCRWLGDLDCRL*MKFQDPPARASIKP
Trigger: AGGCTTTATGCTAGCCCTTGCTGGTGGGTCTTGAAATTTCATCCAGAGTCTGCAGTCCAGGTCACCAAGCCAGCGGCACCCGTCGGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR TCA 90 bp ACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTaGCCTGGACTGCAGACTCTGGATGAAATTTCAAGACCCACCAGC +
Preference number: 1 (lower is better)
Translates to: TIRKTQGCRRVPLAW*PGLQTLDEISRPTS
Trigger: GCTGGTGGGTCTTGAAATTTCATCCAGAGTCTGCAGTCCAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR CCA 90 bp GAGAGGGGCTGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTaGAAACTGTGCTTACAAATGCCTGTGTGGTGTATGGAGGTCGAG +
Preference number: 1 (lower is better)
Translates to: ERGWSNLIHIPTRCL*KLCLQMPVWCMEVE
Trigger: CTCGACCTCCATACACCACACAGGCATTTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCAGCCCCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR GCA 90 bp TTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAAATaGCTGTGTGGTGTATGGAGGTCGAGGAGACCTGGGATCATCAAG +
Preference number: 1 (lower is better)
Translates to: LSIFLQGACGNCAYK*LCGVWRSRRPGIIK
Trigger: CTTGATGATCCCAGGTCTCCTCGACCTCCATACACCACACAGGCATTTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR GCA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTaGTTACAAATGCCTGTGTGGTGTATGGAGGTCGAGGAGACCTGG +
Preference number: 1 (lower is better)
Translates to: WSNLIHIPTRCLWKL*LQMPVWCMEVEETW
Trigger: CCAGGTCTCCTCGACCTCCATACACCACACAGGCATTTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR GCA 90 bp AGTTGTCATGTTAAATCTCAGACCCGGGGTATTATTAGGGTGCATTaGTTGCATCTAACAACCCATGCTCCAAGAAACCACGGTGAGAGC +
Preference number: 1 (lower is better)
Translates to: SCHVKSQTRGIIRVH*LHLTTHAPRNHGES
Trigger: GCTCTCACCGTGGTTTCTTGGAGCATGGGTTGTTAGATGCAAGCAATGCACCCTAATAATACCCCGGGTCTGAGATTTAACATGACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR GCA 90 bp ATCAGTCACCCTTTTTGCTTCAATAATAGGAACGCGCAGTGCAGCTaGCTATGTTACAGAAGCTTGAATCTACATGACATGCAACAGGGT +
Preference number: 1 (lower is better)
Translates to: ISHPFCFNNRNAQCS*LCYRSLNLHDMQQG
Trigger: ACCCTGTTGCATGTCATGTAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAAGCAAAAAGGGTGACTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR GCA 90 bp AAGTTTCACACCATGCCTGTAATAGACTTGGTGCTGCTTCCTAAATaGTCAGCAATTCATTGCATGGACACTGGAGAATGGGACTGTGAT +
Preference number: 1 (lower is better)
Translates to: KFHTMPVIDLVLLPK*SAIHCMDTGEWDCD
Trigger: ATCACAGTCCCATTCTCCAGTGTCCATGCAATGAATTGCTGAGCATTTAGGAAGCAGCACCAAGTCTATTACAGGCATGGTGTGAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR GCA 90 bp CCTGTAATAGACTTGGTGCTGCTTCCTAAATGCTCAGCAATTCATTaGATGGACACTGGAGAATGGGACTGTGATGCAGTTTTCTCTTTT +
Preference number: 1 (lower is better)
Translates to: PVIDLVLLPKCSAIH*MDTGEWDCDAVFSF
Trigger: AAAAGAGAAAACTGCATCACAGTCCCATTCTCCAGTGTCCATGCAATGAATTGCTGAGCATTTAGGAAGCAGCACCAAGTCTATTACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR TCA 90 bp TCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTaGATCTACATGACATGCAACAGGGTAAATGCTACTAGGGAAATT +
Preference number: 1 (lower is better)
Translates to: SIIGTRSAAAYVTEA*IYMTCNRVNATREI
Trigger: AATTTCCCTAGTAGCATTTACCCTGTTGCATGTCATGTAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR GCA 90 bp TTAGGTATCAGTCACCCTTTTTGCTTCAATAATAGGAACGCGCAGTaGAGCTGCCTATGTTACAGAAGCTTGAATCTACATGACATGCAA +
Preference number: 1 (lower is better)
Translates to: LGISHPFCFNNRNAQ*SCLCYRSLNLHDMQ
Trigger: TTGCATGTCATGTAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAAGCAAAAAGGGTGACTGATACCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR GCA 90 bp ATTAGAAATGCCCCTCCCTCAAAAGACAAGCCAACCACATTTCCATaGTTTGTTAGTTATCGGATTAATAGTGAAGTAATGCCATCCGTG +
Preference number: 1 (lower is better)
Translates to: IRNAPPSKDKPTTFP*FVSYRINSEVMPSV
Trigger: CACGGATGGCATTACTTCACTATTAATCCGATAACTAACAAAGCATGGAAATGTGGTTGGCTTGTCTTTTGAGGGAGGGGCATTTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460652.1
ENST00000473616.5
ENST00000481592.5
3UTR GCA 90 bp ATTTCTCCTGAGATGCTTAACATCCTGACAAGCTTTATTAACAACTaGCAACACTACCAAATTATGGCCTCAAGAGCATGCAACATCTTG +
Preference number: 1 (lower is better)
Translates to: ISPEMLNILTSFINN*QHYQIMASRACNIL
Trigger: CAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGCAGTTGTTAATAAAGCTTGTCAGGATGTTAAGCATCTCAGGAGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR GCA 90 bp TCTGTCAGGCTTGAGAACACATCAAACTTTAGAAAGTCAGGTGCATaGTCTCTGTGCTTGGACATTTACACAGTCATCTTTAACTCAATT +
Preference number: 1 (lower is better)
Translates to: SVRLENTSNFRKSGA*SLCLDIYTVIFNSI
Trigger: AATTGAGTTAAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAAGTTTGATGTGTTCTCAAGCCTGACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR TCA 90 bp GAAATAATGTCTTATTACACATTAACTGCGACATCCACTAAAATGTaGACTAGTTTGCATAGGTTAGTCCTTTGGGCAGCACGATGTTGC +
Preference number: 1 (lower is better)
Translates to: EIMSYYTLTATSTKM*TSLHRLVLWAARCC
Trigger: GCAACATCGTGCTGCCCAAAGGACTAACCTATGCAAACTAGTTCACATTTTAGTGGATGTCGCAGTTAATGTGTAATAAGACATTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR TCA 90 bp TATCACTTACAACTAAGTTTATTTGGGGGAGGAAAATATCTTGACTaGTTCACCAATGTAAATGCACTGAAGGCAGCACACACCTCTGAT +
Preference number: 1 (lower is better)
Translates to: YHLQLSLFGGGKYLD*FTNVNALKAAHTSD
Trigger: ATCAGAGGTGTGTGCTGCCTTCAGTGCATTTACATTGGTGAATCAGTCAAGATATTTTCCTCCCCCAAATAAACTTAGTTGTAAGTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR TCA 90 bp TTGTTATCACTTACAACTAAGTTTATTTGGGGGAGGAAAATATCTTaGCTGATTCACCAATGTAAATGCACTGAAGGCAGCACACACCTC +
Preference number: 1 (lower is better)
Translates to: LLSLTTKFIWGRKIS*LIHQCKCTEGSTHL
Trigger: GAGGTGTGTGCTGCCTTCAGTGCATTTACATTGGTGAATCAGTCAAGATATTTTCCTCCCCCAAATAAACTTAGTTGTAAGTGATAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR TCA 90 bp CATTCCTTAGCATGTTTTAAGAATGATCTGGTTGGACCCTACCATTaGAATATGATTTTGTGCTTCTTTAACATGTCTCATAGCAGGTGT +
Preference number: 1 (lower is better)
Translates to: HSLACFKNDLVGPYH*NMILCFFNMSHSRC
Trigger: ACACCTGCTATGAGACATGTTAAAGAAGCACAAAATCATATTTCAATGGTAGGGTCCAACCAGATCATTCTTAAAACATGCTAAGGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
3UTR GCA 90 bp TTTATTAACAACTGCCAACACTACCAAATTATGGCCTCAAGAGCATaGAACATCTTGTTCAGTTTTAGTCTTCATTGTAAAACAACTACC +
Preference number: 1 (lower is better)
Translates to: FINNCQHYQIMASRA*NILFSFSLHCKTTT
Trigger: GGTAGTTGTTTTACAATGAAGACTAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGCAGTTGTTAATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR GCA 90 bp CTTGAGAACACATCAAACTTTAGAAAGTCAGGTGCATGCTCTCTGTaGTTGGACATTTACACAGTCATCTTTAACTCAATTTTTAAAATC +
Preference number: 1 (lower is better)
Translates to: LENTSNFRKSGACSL*LDIYTVIFNSIFKI
Trigger: GATTTTAAAAATTGAGTTAAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAAGTTTGATGTGTTCTCAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR GCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGCTGTTCTCTGCACTGTaGCGTACATCCAGCCATCGT +
Preference number: 2 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLLFSAL*RTSSHR
Trigger: ACGATGGCTGGATGTACGGCACAGTGCAGAGAACAG...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676125.1
3UTR-3UTR TCA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAAGTGCCGCTGGCTTGGTaGCCTGGACTGCAGACTCTG +
Preference number: 2 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKVPLAW*PGLQTL
Trigger: CAGAGTCTGCAGTCCAGGTCACCAAGCCAGCGGCAC...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR GCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGAATAGGAACGCGCAGTaGAGCTGCCTATGTTACAGA +
Preference number: 2 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLNRNAQ*SCLCYR
Trigger: TCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATT...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR GCA 90 bp AGATCTGCATCTTCTTCAAGAAATAAACCCAGTGGACAGAGAGGGGCTGGTCTAAGGGTTGCCGACGGGTaGCGCTGGCTTGGTGACCTG +
Preference number: 2 (lower is better)
Translates to: RSASSSRNKPSGQRGAGLRVADG*RWLGDL
Trigger: CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCT...TAGACCAGCCCCTCTCTGTCCACTGGGTTTATTTCTTGAAGAAGATGCAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCGCCGACGGGTGCCGCTaGCTTGGTGACCTGGACTGC +
Preference number: 2 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTADGCR*LGDLDC
Trigger: GCAGTCCAGGTCACCAAGCCAGCGGCACCCGTCGGC...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR GCA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTAACGCGCAGTGCAGCTaGCTATGTTACAGAAGCTTG +
Preference number: 2 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAANAQCS*LCYRSL
Trigger: CAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTT...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR GCA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCAGGGTTGCCGACGGGTaGCGCTGGCTTGGTGACCTG +
Preference number: 2 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTRVADG*RWLGDL
Trigger: CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCT...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR TCA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTACTGCAGACTCTGGATaGAATTTCAAGACCCACCAG +
Preference number: 2 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAATADSG*NFKTHQ
Trigger: CTGGTGGGTCTTGAAATTTCATCCAGAGTCTGCAGT...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR GCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGAAAACTAGAGTGCGATaGAGCAGGAAAATCTCAAGC +
Preference number: 2 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLKTRVR*SRKISS
Trigger: GCTTGAGATTTTCCTGCTGCATCGCACTCTAGTTTT...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR CCA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAAGCCGACGGGTGCCGCTaGCTTGGTGACCTGGACTGC +
Preference number: 2 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQEADGCR*LGDLDC
Trigger: GCAGTCCAGGTCACCAAGCCAGCGGCACCCGTCGGC...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR TCA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTAAGTCAGACCCTAAGTaGATGCCACCCCGTTGCAGG +
Preference number: 2 (lower is better)
Translates to: LTVSCEERVQKAWNTSETKSDPK*MPPRCR
Trigger: CCTGCAACGGGGTGGCATTCACTTAGGGTCTGACTT...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR GCA 90 bp TCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGAAACGCGCAGTGCAGCTaGCTATGTTACAGAAGCTTG +
Preference number: 2 (lower is better)
Translates to: SLAVSFMHEIPVAKPKVGNAQCS*LCYRSL
Trigger: CAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTT...TCCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR GCA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAACACTCCAGCTTCCATTaGTTCACTGGCTTCTGTTAC +
Preference number: 2 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKHSSFH*FTGFCY
Trigger: GTAACAGAAGCCAGTGAAGCAATGGAAGCTGGAGTG...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR TCA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTAAAGCAAAACGGGTTTaGAATTATTGGCTGCATTAC +
Preference number: 2 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAAKAKRV*NYWLHY
Trigger: GTAATGCAGCCAATAATTTCAAACCCGTTTTGCTTT...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR GCA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCGCACGAGATACCTGTTaGCAAACCAAAGGTGGGAGG +
Preference number: 2 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTARDTC*QTKGGR
Trigger: CCTCCCACCTTTGGTTTGGCAACAGGTATCTCGTGC...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAAGTTTTTCTGATGAGCTaGCGACTAGAGGAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKVFLMS*RLEEER
Trigger: CCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR CAA 90 bp ACAGAGAGGGGCTGGTCTAATCTTATCCATATTCCTACAAGGTGCTaGTGGAAACTGTGCTTACAAATGCCTGTGTGGTGTATGGAGGTC +
Preference number: 2 (lower is better)
Translates to: TERGWSNLIHIPTRC*WKLCLQMPVWCMEV
Trigger: GACCTCCATACACCACACAGGCATTTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCAGCCCCTCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR CAA 90 bp TGTCATGTTAAATCTCAGACCCGGGGTATTATTAGGGTGCATTGCTaGCATCTAACAACCCATGCTCCAAGAAACCACGGTGAGAGCCAA +
Preference number: 2 (lower is better)
Translates to: CHVKSQTRGIIRVHC*HLTTHAPRNHGESQ
Trigger: TTGGCTCTCACCGTGGTTTCTTGGAGCATGGGTTGTTAGATGCAAGCAATGCACCCTAATAATACCCCGGGTCTGAGATTTAACATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR TCA 90 bp TTCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGGAAGTTATTTGGTCCTaGCATTCTGTGGAACTGAGC +
Preference number: 2 (lower is better)
Translates to: FFSCQLHARDTCCQTKGGEVIWS*HSVELS
Trigger: GCTCAGTTCCACAGAATGTCAGGACCAAATAACTTC...CCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR GCA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAACCTTCAAAACTAGAGTaGGATGCAGCAGGAAAATCT +
Preference number: 2 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKPSKLE*DAAGKS
Trigger: AGATTTTCCTGCTGCATCGCACTCTAGTTTTGAAGG...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR GCA 90 bp TTTAGAAAGTCAGGTGCATGCTCTCTGTGCTTGGACATTTACACAGTCATCTTTCAGACCCTAAGTGAATaGCACCCCGTTGCAGGTCAC +
Preference number: 2 (lower is better)
Translates to: FRKSGACSLCLDIYTVIFQTLSE*HPVAGH
Trigger: GTGACCTGCAACGGGGTGGCATTCACTTAGGGTCTG...AAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp AGATCTGCATCTTCTTCAAGAAATAAACCCAGTGGACAGAGAGGGGCTGGTCTATGGGAGGGAAGCACGTaGAAAGTGGAAAAGTTGTTC +
Preference number: 2 (lower is better)
Translates to: RSASSSRNKPSGQRGAGLWEGST*KVEKLF
Trigger: GAACAACTTTTCCACTTTCCACGTGCTTCCCTCCCA...TAGACCAGCCCCTCTCTGTCCACTGGGTTTATTTCTTGAAGAAGATGCAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR CAA 90 bp CAGTTCTATCATAGGAGACCACTTGCAGGGAACACATTAAAGCCATaGCTGACACAGCCATCTGTCATTCCTGGTTTGCCGTCATTTAAG +
Preference number: 2 (lower is better)
Translates to: QFYHRRPLAGNTLKP*LTQPSVIPGLPSFK
Trigger: CTTAAATGACGGCAAACCAGGAATGACAGATGGCTGTGTCAGCAATGGCTTTAATGTGTTCCCTGCAAGTGGTCTCCTATGATAGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAAATTAACCCGTTTTGGTaGCTAGATTTCCATTCCAGA +
Preference number: 2 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKINPFW*LDFHSR
Trigger: TCTGGAATGGAAATCTAGCCACCAAAACGGGTTAAT...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR CCA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAATTGATTAACCCGTTTTaGTGGCTAGATTTCCATTCC +
Preference number: 2 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKLINPF*WLDFHS
Trigger: GGAATGGAAATCTAGCCACCAAAACGGGTTAATCAA...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR CCA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTTTACAAATGCCTGTGTaGTGTATGGAGGTCGAGGAG +
Preference number: 2 (lower is better)
Translates to: LTVSCEERVQKAWNTSETLQMPV*CMEVEE
Trigger: CTCCTCGACCTCCATACACCACACAGGCATTTGTAA...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR TCA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCAGAAGTTATTTGGTCCTaGCATTCTGTGGAACTGAGC +
Preference number: 2 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSEVIWS*HSVELS
Trigger: GCTCAGTTCCACAGAATGTCAGGACCAAATAACTTC...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR GCA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTAGAAAAACACAGGGTTaGCGACGGGTGCCGCTGGCT +
Preference number: 2 (lower is better)
Translates to: LISLNITYKADIPKTRTSRKTQG*RRVPLA
Trigger: AGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCT...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR CCA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCCTGGACTGCAGACTCTaGATGAAATTTCAAGACCCA +
Preference number: 2 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTLDCRL*MKFQDP
Trigger: TGGGTCTTGAAATTTCATCCAGAGTCTGCAGTCCAG...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTGAAGCACGTGGAAAGTaGAAAAGTTGTTCAGGCATG +
Preference number: 2 (lower is better)
Translates to: LTVSCEERVQKAWNTSETEARGK*KSCSGM
Trigger: CATGCCTGAACAACTTTTCCACTTTCCACGTGCTTC...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp TTTAGAAAGTCAGGTGCATGCTCTCTGTGCTTGGACATTTACACAGTCATCTTTTTGCCAAACCAAAGGTaGGAGGGAAGCACGTGGAAA +
Preference number: 2 (lower is better)
Translates to: FRKSGACSLCLDIYTVIFLPNQR*EGSTWK
Trigger: TTTCCACGTGCTTCCCTCCCACCTTTGGTTTGGCAA...AAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTCAAGAGCCTCCTCCATaGGCAGTTGATAACCAAATA +
Preference number: 2 (lower is better)
Translates to: LTVSCEERVQKAWNTSETQEPPP*AVDNQI
Trigger: TATTTGGTTATCAACTGCCCATGGAGGAGGCTCTTG...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR CAA 90 bp GATCACAGGTCAAACATCAAGTTTCACACCATGCCTGTAATAGACTaGGTGCTGCTTCCTAAATGCTCAGCAATTCATTGCATGGACACT +
Preference number: 2 (lower is better)
Translates to: DHRSNIKFHTMPVID*VLLPKCSAIHCMDT
Trigger: AGTGTCCATGCAATGAATTGCTGAGCATTTAGGAAGCAGCACCAAGTCTATTACAGGCATGGTGTGAAACTTGATGTTTGACCTGTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR TCA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTAGAAGTTATTTGGTCCTaGCATTCTGTGGAACTGAGC +
Preference number: 2 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLEVIWS*HSVELS
Trigger: GCTCAGTTCCACAGAATGTCAGGACCAAATAACTTC...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR TCA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCCATTGTAACATTCCGTaGAGCCCCTTCATTTGCAAA +
Preference number: 2 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTHCNIP*SPFICK
Trigger: TTTGCAAATGAAGGGGCTTCACGGAATGTTACAATG...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR GCA 90 bp AGATCTGCATCTTCTTCAAGAAATAAACCCAGTGGACAGAGAGGGGCTGGTCTAATCAGTCACCCTTTTTaGTTCAATAATAGGAACGCG +
Preference number: 2 (lower is better)
Translates to: RSASSSRNKPSGQRGAGLISHPF*FNNRNA
Trigger: CGCGTTCCTATTATTGAAGCAAAAAGGGTGACTGAT...TAGACCAGCCCCTCTCTGTCCACTGGGTTTATTTCTTGAAGAAGATGCAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR GCA 90 bp TTTAGAAAGTCAGGTGCATGCTCTCTGTGCTTGGACATTTACACAGTCATCTTTCACTCCAGCTTCCATTaGTTCACTGGCTTCTGTTAC +
Preference number: 2 (lower is better)
Translates to: FRKSGACSLCLDIYTVIFHSSFH*FTGFCY
Trigger: GTAACAGAAGCCAGTGAAGCAATGGAAGCTGGAGTG...AAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR CAA 90 bp TACAGAGAGAAAACACAGAATATTAAGACCCTGAAGAGAGTGCATTaGAGAACGCAGTTCTATCATAGGAGACCACTTGCAGGGAACACA +
Preference number: 2 (lower is better)
Translates to: YREKTQNIKTLKRVH*RTQFYHRRPLAGNT
Trigger: TGTGTTCCCTGCAAGTGGTCTCCTATGATAGAACTGCGTTCTCAAATGCACTCTCTTCAGGGTCTTAATATTCTGTGTTTTCTCTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR GCA 90 bp ATCCTGACAAGCTTTATTAACAACTGCCAACACTACCAAATTATGGCCTCAAGAAATAGGAACGCGCAGTaGAGCTGCCTATGTTACAGA +
Preference number: 2 (lower is better)
Translates to: ILTSFINNCQHYQIMASRNRNAQ*SCLCYR
Trigger: TCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATT...TCTTGAGGCCATAATTTGGTAGTGTTGGCAGTTGTTAATAAAGCTTGTCAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR GCA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGAGAAAGTCAGGTGCATaGTCTCTGTGCTTGGACATT +
Preference number: 2 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQRKSGA*SLCLDI
Trigger: AATGTCCAAGCACAGAGAGCATGCACCTGACTTTCT...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCTTAAGAGAATTGGCTTaGGGTGATTCCAAAGTGACA +
Preference number: 2 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTLRELA*GDSKVT
Trigger: TGTCACTTTGGAATCACCCCAAGCCAATTCTCTTAA...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp GCCAACACTACCAAATTATGGCCTCAAGAGCATGCAACATCTTGTTCAGTTTTACTGGACTGCAGACTCTaGATGAAATTTCAAGACCCA +
Preference number: 2 (lower is better)
Translates to: ANTTKLWPQEHATSCSVLLDCRL*MKFQDP
Trigger: TGGGTCTTGAAATTTCATCCAGAGTCTGCAGTCCAG...TAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCAGGGTCCAAAAGGCATaGAATACTTCAGAGACTTTT +
Preference number: 2 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTRVQKA*NTSETF
Trigger: AAAAGTCTCTGAAGTATTCCATGCCTTTTGGACCCT...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR TCA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTTATGTTACAGAAGCTTaGATCTACATGACATGCAAC +
Preference number: 2 (lower is better)
Translates to: LTVSCEERVQKAWNTSETYVTEA*IYMTCN
Trigger: GTTGCATGTCATGTAGATTCAAGCTTCTGTAACATA...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR TCA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCTTTTTGATCAACAGTTaGCAGTTAGTTGCGAGGAAA +
Preference number: 2 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTFLINS*QLVARK
Trigger: TTTCCTCGCAACTAACTGTCAACTGTTGATCAAAAA...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR GCA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAACTTGGTGACCTGGACTaGAGACTCTGGATGAAATTT +
Preference number: 2 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQELGDLD*RLWMKF
Trigger: AAATTTCATCCAGAGTCTGCAGTCCAGGTCACCAAG...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR GCA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGTCTGTTGCTATACTTTaGTCAAGAGAGAGAGGATCC +
Preference number: 2 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQSVAIL*SRERGS
Trigger: GGATCCTCTCTCTCTTGAGCAAAGTATAGCAACAGA...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAACAAGAGCCTCCTCCATaGGCAGTTGATAACCAAATA +
Preference number: 2 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQEQEPPP*AVDNQI
Trigger: TATTTGGTTATCAACTGCCCATGGAGGAGGCTCTTG...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp GTGATTAGAAATGCCCCTCCCTCAAAAGACAAGCCAACCACATTTCCATGCTTTATCTGTTTATGGTCCTaGGTATATTTTACCGAGCTA +
Preference number: 2 (lower is better)
Translates to: VIRNAPPSKDKPTTFPCFICLWS*VYFTEL
Trigger: TAGCTCGGTAAAATATACCCAGGACCATAAACAGAT...AAAGCATGGAAATGTGGTTGGCTTGTCTTTTGAGGGAGGGGCATTTCTAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
3UTR-3UTR CCA 90 bp GAGGTACATCCCTTGAACTTCCACTATCTTTTTAGAAAAAGTCTTGTTCCTCATCTCAATGTAATTCGCTaGGAGCATTCCTGTTCTCCC +
Preference number: 2 (lower is better)
Translates to: EVHPLNFHYLFRKSLVPHLNVIR*EHSCSP
Trigger: GGGAGAACAGGAATGCTCCCAGCGAATTACATTGAG...ATGAGGAACAAGACTTTTTCTAAAAAGATAGTGGAAGTTCAAGGGATGTACCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000676125.1
3UTR-3UTR GCA 90 bp GAGGTACATCCCTTGAACTTCCACTATCTTTTTAGAAAAAGTCTTGTTCCTCATAGAAAGTCAGGTGCATaGTCTCTGTGCTTGGACATT +
Preference number: 2 (lower is better)
Translates to: EVHPLNFHYLFRKSLVPHRKSGA*SLCLDI
Trigger: AATGTCCAAGCACAGAGAGCATGCACCTGACTTTCT...ATGAGGAACAAGACTTTTTCTAAAAAGATAGTGGAAGTTCAAGGGATGTACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp GCCAACACTACCAAATTATGGCCTCAAGAGCATGCAACATCTTGTTCAGTTTTATTAAGAGAATTGGCTTaGGGTGATTCCAAAGTGACA +
Preference number: 2 (lower is better)
Translates to: ANTTKLWPQEHATSCSVLLRELA*GDSKVT
Trigger: TGTCACTTTGGAATCACCCCAAGCCAATTCTCTTAA...TAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGTTGATTAACCCGTTTTaGTGGCTAGATTTCCATTCC +
Preference number: 2 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQLINPF*WLDFHS
Trigger: GGAATGGAAATCTAGCCACCAAAACGGGTTAATCAA...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp AATCAGCTAACACCTTTAATATCTGAGGAGCATCCCACTTCCCTACCACAAAAATTGATTAACCCGTTTTaGTGGCTAGATTTCCATTCC +
Preference number: 2 (lower is better)
Translates to: NQLTPLISEEHPTSLPQKLINPF*WLDFHS
Trigger: GGAATGGAAATCTAGCCACCAAAACGGGTTAATCAA...TTTTTGTGGTAGGGAAGTGGGATGCTCCTCAGATATTAAAGGTGTTAGCTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAACATGCTCTCTGTGCTTaGACATTTACACAGTCATCT +
Preference number: 2 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQHALCA*TFTQSS
Trigger: AGATGACTGTGTAAATGTCCAAGCACAGAGAGCATG...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAATGGACAGAGAGGGGCTaGTCTAATCTTATCCATATT +
Preference number: 2 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQEWTERG*SNLIHI
Trigger: AATATGGATAAGATTAGACCAGCCCCTCTCTGTCCA...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp ATGTTTCCACTGCATTTCAGTGTGATTAGAAATGCCCCTCCCTCAAAAGACAAGGTTTTAAGAATGATCTaGTTGGACCCTACCATTGAA +
Preference number: 2 (lower is better)
Translates to: MFPLHFSVIRNAPPSKDKVLRMI*LDPTIE
Trigger: TTCAATGGTAGGGTCCAACCAGATCATTCTTAAAAC...CTTGTCTTTTGAGGGAGGGGCATTTCTAATCACACTGAAATGCAGTGGAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
3UTR-3UTR CCA 90 bp ACCTTTCATCTGTTTATGGTCCTGGGTATATTTTACCGAGCTAATATTTTCTTGCCTCTTCAGCTCTGGTaGATCAGAAATTGCAGTTCC +
Preference number: 2 (lower is better)
Translates to: TFHLFMVLGIFYRANIFLPLQLW*IRNCSS
Trigger: GGAACTGCAATTTCTGATCCACCAGAGCTGAAGAGG...CAAGAAAATATTAGCTCGGTAAAATATACCCAGGACCATAAACAGATGAAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481592.5
3UTR CAA 90 bp TTCCAAAAGAAGATACCAGATCATCTCTGTATGGAATTGGTAACTTaGTTTGCTGAGTATTTTTCCAGTCACACTCCAGCTTCCATTGCT +
Preference number: 2 (lower is better)
Translates to: FQKKIPDHLCMELVT*FAEYFSSHTPASIA
Trigger: AGCAATGGAAGCTGGAGTGTGACTGGAAAAATACTCAGCAAACAAAGTTACCAATTCCATACAGAGATGATCTGGTATCTTCTTTTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR TCA 90 bp CTCATAGCAGGTGTATCTAAAATCAGACTTGGTCTACCTTTCATCTGTTTATGGGTTGGACCCTACCATTaGAATATGATTTTGTGCTTC +
Preference number: 2 (lower is better)
Translates to: LIAGVSKIRLGLPFICLWVGPYH*NMILCF
Trigger: GAAGCACAAAATCATATTTCAATGGTAGGGTCCAAC...CCATAAACAGATGAAAGGTAGACCAAGTCTGATTTTAGATACACCTGCTATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
3UTR-3UTR GCA 90 bp GAGGTACATCCCTTGAACTTCCACTATCTTTTTAGAAAAAGTCTTGTTCCTCATTCTGTTGCTATACTTTaGTCAAGAGAGAGAGGATCC +
Preference number: 2 (lower is better)
Translates to: EVHPLNFHYLFRKSLVPHSVAIL*SRERGS
Trigger: GGATCCTCTCTCTCTTGAGCAAAGTATAGCAACAGA...ATGAGGAACAAGACTTTTTCTAAAAAGATAGTGGAAGTTCAAGGGATGTACCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTGTTTTTCTGATGAGCTaGCGACTAGAGGAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: LISLNITYKADIPKTRTSVFLMS*RLEEER
Trigger: CCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR CCA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAAATTAACCCGTTTTGGTaGCTAGATTTCCATTCCAGA +
Preference number: 2 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQEINPFW*LDFHSR
Trigger: TCTGGAATGGAAATCTAGCCACCAAAACGGGTTAAT...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGCACTGTAATCGTACATaGCTCGGTAGGTCCTTAGAT +
Preference number: 2 (lower is better)
Translates to: KFILCSESSLTIILSYNRHCNRT*LGRSLD
Trigger: ATCTAAGGACCTACCGAGCCATGTACGATTACAGTG...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676125.1
3UTR-3UTR GCA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTCCTTCAAAACTAGAGTaGGATGCAGCAGGAAAATCT +
Preference number: 2 (lower is better)
Translates to: LISLNITYKADIPKTRTSPSKLE*DAAGKS
Trigger: AGATTTTCCTGCTGCATCGCACTCTAGTTTTGAAGG...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR GCA 90 bp AATCAGCTAACACCTTTAATATCTGAGGAGCATCCCACTTCCCTACCACAAAAATCAGTGACATATAGATaGAGCTTCAGTGTAATAAAG +
Preference number: 2 (lower is better)
Translates to: NQLTPLISEEHPTSLPQKSVTYR*SFSVIK
Trigger: CTTTATTACACTGAAGCTGCATCTATATGTCACTGA...TTTTTGTGGTAGGGAAGTGGGATGCTCCTCAGATATTAAAGGTGTTAGCTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp AATCAGCTAACACCTTTAATATCTGAGGAGCATCCCACTTCCCTACCACAAAAAATAAATATTTCAAACTaGGCTACACTGCAAGTGTGT +
Preference number: 2 (lower is better)
Translates to: NQLTPLISEEHPTSLPQKINISN*ATLQVC
Trigger: ACACACTTGCAGTGTAGCCCAGTTTGAAATATTTAT...TTTTTGTGGTAGGGAAGTGGGATGCTCCTCAGATATTAAAGGTGTTAGCTGATT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTTTAAGAGAATTGGCTTaGGGTGATTCCAAAGTGACA +
Preference number: 2 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLILRELA*GDSKVT
Trigger: TGTCACTTTGGAATCACCCCAAGCCAATTCTCTTAA...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR CAA 90 bp GAGAACACATCAAACTTTAGAAAGTCAGGTGCATGCTCTCTGTGCTaGGACATTTACACAGTCATCTTTAACTCAATTTTTAAAATCTTC +
Preference number: 2 (lower is better)
Translates to: ENTSNFRKSGACSLC*DIYTVIFNSIFKIF
Trigger: GAAGATTTTAAAAATTGAGTTAAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAAGTTTGATGTGTTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR TCA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGAAAGCAAAACGGGTTTaGAATTATTGGCTGCATTAC +
Preference number: 2 (lower is better)
Translates to: KFILCSESSLTIILSYNRKAKRV*NYWLHY
Trigger: GTAATGCAGCCAATAATTTCAAACCCGTTTTGCTTT...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CCA 90 bp GAGGTACATCCCTTGAACTTCCACTATCTTTTTAGAAAAAGTCTTGTTCCTCATATAAATATTTCAAACTaGGCTACACTGCAAGTGTGT +
Preference number: 2 (lower is better)
Translates to: EVHPLNFHYLFRKSLVPHINISN*ATLQVC
Trigger: ACACACTTGCAGTGTAGCCCAGTTTGAAATATTTAT...ATGAGGAACAAGACTTTTTCTAAAAAGATAGTGGAAGTTCAAGGGATGTACCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR GCA 72 bp ACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTaGCGCTGGCTTGGTGACCTGGACTGCAGACTCTGG +
Preference number: 3 (lower is better)
Translates to: TAQSEKHRVADG*RWLGDLDCRLW
Trigger: CCAGAGTCTGCAGTCCAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR GCA 72 bp GTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGGACTaGAGACTCTGGATGAAATTTCAAGACCCACCAGCA +
Preference number: 3 (lower is better)
Translates to: VADGCRWLGDLD*RLWMKFQDPPA
Trigger: TGCTGGTGGGTCTTGAAATTTCATCCAGAGTCTGCAGTCCAGGTCACCAAGCCAGCGGCACCCGTCGGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR TCA 72 bp AAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTaGCCTGGACTGCAGACTCTGGATGAAATTTCAAGA +
Preference number: 3 (lower is better)
Translates to: KTQGCRRVPLAW*PGLQTLDEISR
Trigger: TCTTGAAATTTCATCCAGAGTCTGCAGTCCAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR CAA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGAAAAGGACGTCTTTaGATTAACCCGTTTTGGTGG +
Preference number: 3 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAAGKGRL*INPFWW
Trigger: CCACCAAAACGGGTTAATCAAAAGACGTCCTTTTCC...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR GCA 72 bp TTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAAATaGCTGTGTGGTGTATGGAGGTCGAGGAGACCTGGG +
Preference number: 3 (lower is better)
Translates to: FLQGACGNCAYK*LCGVWRSRRPG
Trigger: CCCAGGTCTCCTCGACCTCCATACACCACACAGGCATTTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR CCA 72 bp TGTGGAAACTGTGCTTACAAATGCCTGTGTGGTGTATaGAGGTCGAGGAGACCTGGGATCATCAAGAGCCTC +
Preference number: 3 (lower is better)
Translates to: CGNCAYKCLCGV*RSRRPGIIKSL
Trigger: GAGGCTCTTGATGATCCCAGGTCTCCTCGACCTCCATACACCACACAGGCATTTGTAAGCACAGTTTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR GCA 72 bp TTCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTaGCAAACCAAAGGTGGGAGGGAAGCACGTGGAAAG +
Preference number: 3 (lower is better)
Translates to: FFSCQLHARDTC*QTKGGREARGK
Trigger: CTTTCCACGTGCTTCCCTCCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR CCA 72 bp GCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTaGGAGGGAAGCACGTGGAAAGTGGAAAAGTTGTTC +
Preference number: 3 (lower is better)
Translates to: ASCTRYLLPNQR*EGSTWKVEKLF
Trigger: GAACAACTTTTCCACTTTCCACGTGCTTCCCTCCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR CCA 72 bp AGACCTCGTCTTCATCCTGGGCACTGTAATCGTACATaGCTCGGTAGGTCCTTAGATTTGGTGAATGCTGCA +
Preference number: 3 (lower is better)
Translates to: RPRLHPGHCNRT*LGRSLDLVNAA
Trigger: TGCAGCATTCACCAAATCTAAGGACCTACCGAGCCATGTACGATTACAGTGCCCAGGATGAAGACGAGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676125.1
3UTR-3UTR CAA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGACGGGTGCCGCTGGCTaGGTGACCTGGACTGCAGAC +
Preference number: 3 (lower is better)
Translates to: KFILCSESSLTIILSYNRTGAAG*VTWTAD
Trigger: GTCTGCAGTCCAGGTCACCAAGCCAGCGGCACCCGT...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CAA 90 bp TGCACTGGATCCGCCCATTCCTTAGCATGTTTTAAGAATGATCTGGTTGGACCCCTGGTGGATCAGAAATaGCAGTTCCCCGTTGAAGTT +
Preference number: 3 (lower is better)
Translates to: CTGSAHSLACFKNDLVGPLVDQK*QFPVEV
Trigger: AACTTCAACGGGGAACTGCAATTTCTGATCCACCAG...GGGTCCAACCAGATCATTCTTAAAACATGCTAAGGAATGGGCGGATCCAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481592.5
3UTR TCA 72 bp TGCCCTTTGCAGAGTAGCTGTGAAGTTATTTGGTCCTaGCATTCTGTGGAACTGAGCATAGACTTGGGTCCA +
Preference number: 3 (lower is better)
Translates to: CPLQSSCEVIWS*HSVELSIDLGP
Trigger: TGGACCCAAGTCTATGCTCAGTTCCACAGAATGTCAGGACCAAATAACTTCACAGCTACTCTGCAAAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR TCA 72 bp GGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTaGATCTACATGACATGCAACAGGGTAAATGCTACT +
Preference number: 3 (lower is better)
Translates to: GTRSAAAYVTEA*IYMTCNRVNAT
Trigger: AGTAGCATTTACCCTGTTGCATGTCATGTAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR GCA 72 bp GACTTGGTGCTGCTTCCTAAATGCTCAGCAATTCATTaGATGGACACTGGAGAATGGGACTGTGATGCAGTT +
Preference number: 3 (lower is better)
Translates to: DLVLLPKCSAIH*MDTGEWDCDAV
Trigger: AACTGCATCACAGTCCCATTCTCCAGTGTCCATGCAATGAATTGCTGAGCATTTAGGAAGCAGCACCAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CAA 90 bp AGATCTGCATCTTCTTCAAGAAATAAACCCAGTGGACAGAGAGGGGCTGGTCTAGGAAAAGGACGTCTTTaGATTAACCCGTTTTGGTGG +
Preference number: 3 (lower is better)
Translates to: RSASSSRNKPSGQRGAGLGKGRL*INPFWW
Trigger: CCACCAAAACGGGTTAATCAAAAGACGTCCTTTTCC...TAGACCAGCCCCTCTCTGTCCACTGGGTTTATTTCTTGAAGAAGATGCAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CAA 90 bp GAGGTACATCCCTTGAACTTCCACTATCTTTTTAGAAAAAGTCTTGTTCCTCATGTGAATGCCACCCCGTaGCAGGTCACAGTAAACGGC +
Preference number: 3 (lower is better)
Translates to: EVHPLNFHYLFRKSLVPHVNATP*QVTVNG
Trigger: GCCGTTTACTGTGACCTGCAACGGGGTGGCATTCAC...ATGAGGAACAAGACTTTTTCTAAAAAGATAGTGGAAGTTCAAGGGATGTACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR TCA 72 bp TCCCAGAAGGGTTCAATAGCCAATCAAAGGAAACCATaGACACAATTAGCAGCACCAGGTGTCCAGACACAA +
Preference number: 3 (lower is better)
Translates to: SQKGSIANQRKP*TQLAAPGVQTQ
Trigger: TTGTGTCTGGACACCTGGTGCTGCTAATTGTGTTCATGGTTTCCTTTGATTGGCTATTGAACCCTTCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR GCA 72 bp ACCATGCCTGTAATAGACTTGGTGCTGCTTCCTAAATaGTCAGCAATTCATTGCATGGACACTGGAGAATGG +
Preference number: 3 (lower is better)
Translates to: TMPVIDLVLLPK*SAIHCMDTGEW
Trigger: CCATTCTCCAGTGTCCATGCAATGAATTGCTGAGCATTTAGGAAGCAGCACCAAGTCTATTACAGGCATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR CCA 72 bp TGGTGCTGCTTCCTAAATGCTCAGCAATTCATTGCATaGACACTGGAGAATGGGACTGTGATGCAGTTTTCT +
Preference number: 3 (lower is better)
Translates to: WCCFLNAQQFIA*TLENGTVMQFS
Trigger: AGAAAACTGCATCACAGTCCCATTCTCCAGTGTCCATGCAATGAATTGCTGAGCATTTAGGAAGCAGCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CAA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAAATTATAATTTGCCCTTaGCAGAGTAGCTGTGAAGTT +
Preference number: 3 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKIIICP*QSSCEV
Trigger: AACTTCACAGCTACTCTGCAAAGGGCAAATTATAAT...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR CAA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCCAGCAACTTGCTTGCTaGGTTTTCTTTCCAAGAGCA +
Preference number: 3 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTQQLAC*VFFPRA
Trigger: TGCTCTTGGAAAGAAAACCAAGCAAGCAAGTTGCTG...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CAA 90 bp TCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGAATTATAATTTGCCCTTaGCAGAGTAGCTGTGAAGTT +
Preference number: 3 (lower is better)
Translates to: SLAVSFMHEIPVAKPKVGIIICP*QSSCEV
Trigger: AACTTCACAGCTACTCTGCAAAGGGCAAATTATAAT...TCCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CAA 90 bp TTTAGAAAGTCAGGTGCATGCTCTCTGTGCTTGGACATTTACACAGTCATCTTTGCATGCTCTCTGTGCTaGGACATTTACACAGTCATC +
Preference number: 3 (lower is better)
Translates to: FRKSGACSLCLDIYTVIFACSLC*DIYTVI
Trigger: GATGACTGTGTAAATGTCCAAGCACAGAGAGCATGC...AAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR GCA 72 bp CCTTTTTGCTTCAATAATAGGAACGCGCAGTGCAGCTaGCTATGTTACAGAAGCTTGAATCTACATGACATG +
Preference number: 3 (lower is better)
Translates to: PFCFNNRNAQCS*LCYRSLNLHDM
Trigger: CATGTCATGTAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAAGCAAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR GCA 72 bp AGTCACCCTTTTTGCTTCAATAATAGGAACGCGCAGTaGAGCTGCCTATGTTACAGAAGCTTGAATCTACAT +
Preference number: 3 (lower is better)
Translates to: SHPFCFNNRNAQ*SCLCYRSLNLH
Trigger: ATGTAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAAGCAAAAAGGGTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR GCA 72 bp GAGATGCTTAACATCCTGACAAGCTTTATTAACAACTaGCAACACTACCAAATTATGGCCTCAAGAGCATGC +
Preference number: 3 (lower is better)
Translates to: EMLNILTSFINN*QHYQIMASRAC
Trigger: GCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGCAGTTGTTAATAAAGCTTGTCAGGATGTTAAGCATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR GCA 72 bp GCCCCTCCCTCAAAAGACAAGCCAACCACATTTCCATaGTTTGTTAGTTATCGGATTAATAGTGAAGTAATG +
Preference number: 3 (lower is better)
Translates to: APPSKDKPTTFP*FVSYRINSEVM
Trigger: CATTACTTCACTATTAATCCGATAACTAACAAAGCATGGAAATGTGGTTGGCTTGTCTTTTGAGGGAGGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460652.1
ENST00000473616.5
ENST00000481592.5
3UTR CCA 72 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTaGAAACTGTGCTTACAAATGCCTGTGTGGTGTATG +
Preference number: 3 (lower is better)
Translates to: WSNLIHIPTRCL*KLCLQMPVWCM
Trigger: CATACACCACACAGGCATTTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CAA 90 bp AATCAGCTAACACCTTTAATATCTGAGGAGCATCCCACTTCCCTACCACAAAAAACAGAGTTAAGAGAATaGGCTTGGGGTGATTCCAAA +
Preference number: 3 (lower is better)
Translates to: NQLTPLISEEHPTSLPQKTELRE*AWGDSK
Trigger: TTTGGAATCACCCCAAGCCAATTCTCTTAACTCTGT...TTTTTGTGGTAGGGAAGTGGGATGCTCCTCAGATATTAAAGGTGTTAGCTGATT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CAA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCAATTATAATTTGCCCTTaGCAGAGTAGCTGTGAAGTT +
Preference number: 3 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSIIICP*QSSCEV
Trigger: AACTTCACAGCTACTCTGCAAAGGGCAAATTATAAT...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR-3UTR CAA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCTCAGTGAATCTGGTTTaGAAATCGGTGGATGAAATT +
Preference number: 3 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTSVNLV*KSVDEI
Trigger: AATTTCATCCACCGATTTCAAAACCAGATTCACTGA...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CAA 90 bp AATCAGCTAACACCTTTAATATCTGAGGAGCATCCCACTTCCCTACCACAAAAAATTCCTACAAGGTGCTaGTGGAAACTGTGCTTACAA +
Preference number: 3 (lower is better)
Translates to: NQLTPLISEEHPTSLPQKIPTRC*WKLCLQ
Trigger: TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAAT...TTTTTGTGGTAGGGAAGTGGGATGCTCCTCAGATATTAAAGGTGTTAGCTGATT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CAA 90 bp ATCCTGACAAGCTTTATTAACAACTGCCAACACTACCAAATTATGGCCTCAAGAGGTAGGTCCTTAGATTaGGTGAATGCTGCATTGATC +
Preference number: 3 (lower is better)
Translates to: ILTSFINNCQHYQIMASRGRSLD*VNAALI
Trigger: GATCAATGCAGCATTCACCAAATCTAAGGACCTACC...TCTTGAGGCCATAATTTGGTAGTGTTGGCAGTTGTTAATAAAGCTTGTCAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676125.1
3UTR-3UTR CAA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGCATCTCTGTATGGAATaGGTAACTTTGTTTGCTGAG +
Preference number: 3 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQHLCME*VTLFAE
Trigger: CTCAGCAAACAAAGTTACCAATTCCATACAGAGATG...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CAA 90 bp AATCAGCTAACACCTTTAATATCTGAGGAGCATCCCACTTCCCTACCACAAAAAAACGAGGTACATCCCTaGAACTTCCACTATCTTTTT +
Preference number: 3 (lower is better)
Translates to: NQLTPLISEEHPTSLPQKNEVHP*NFHYLF
Trigger: AAAAAGATAGTGGAAGTTCAAGGGATGTACCTCGTT...TTTTTGTGGTAGGGAAGTGGGATGCTCCTCAGATATTAAAGGTGTTAGCTGATT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR TCA 72 bp AGCAAACAGAAGCCAAACTGTACAATGGTTCAATTTTaGTCACAGGTCAAACATCAAGTTTCACACCATGCC +
Preference number: 3 (lower is better)
Translates to: SKQKPNCTMVQF*SQVKHQVSHHA
Trigger: GGCATGGTGTGAAACTTGATGTTTGACCTGTGATCAAAATTGAACCATTGTACAGTTTGGCTTCTGTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CAA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAACATCTCTGTATGGAATaGGTAACTTTGTTTGCTGAG +
Preference number: 3 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQHLCME*VTLFAE
Trigger: CTCAGCAAACAAAGTTACCAATTCCATACAGAGATG...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CAA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGGGAAAAGGACGTCTTTaGATTAACCCGTTTTGGTGG +
Preference number: 3 (lower is better)
Translates to: KFILCSESSLTIILSYNRGKGRL*INPFWW
Trigger: CCACCAAAACGGGTTAATCAAAAGACGTCCTTTTCC...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CAA 90 bp TTTAGAAAGTCAGGTGCATGCTCTCTGTGCTTGGACATTTACACAGTCATCTTTTCAGTGAATCTGGTTTaGAAATCGGTGGATGAAATT +
Preference number: 3 (lower is better)
Translates to: FRKSGACSLCLDIYTVIFSVNLV*KSVDEI
Trigger: AATTTCATCCACCGATTTCAAAACCAGATTCACTGA...AAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CAA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGTGGAAAGTGGAAAAGTaGTTCAGGCATGTCATTTTT +
Preference number: 3 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQWKVEK*FRHVIF
Trigger: AAAAATGACATGCCTGAACAACTTTTCCACTTTCCA...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR-3UTR CAA 90 bp GTGTATCTAAAATCAGACTTGGTCTACCTTTCATCTGTTTATGGTCCTGGGTATGGTTGGACCCTACCATaGAAATATGATTTTGTGCTT +
Preference number: 3 (lower is better)
Translates to: VYLKSDLVYLSSVYGPGYGWTLP*KYDFVL
Trigger: AAGCACAAAATCATATTTCAATGGTAGGGTCCAACC...ATACCCAGGACCATAAACAGATGAAAGGTAGACCAAGTCTGATTTTAGATACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
3UTR-3UTR CAA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTACAGAGTTAAGAGAATaGGCTTGGGGTGATTCCAAA +
Preference number: 3 (lower is better)
Translates to: LISLNITYKADIPKTRTSTELRE*AWGDSK
Trigger: TTTGGAATCACCCCAAGCCAATTCTCTTAACTCTGT...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR GCA 72 bp AACTGCCAACACTACCAAATTATGGCCTCAAGAGCATaGAACATCTTGTTCAGTTTTAGTCTTCATTGTAAA +
Preference number: 3 (lower is better)
Translates to: NCQHYQIMASRA*NILFSFSLHCK
Trigger: TTTACAATGAAGACTAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGCAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR GCA 72 bp ACATCAAACTTTAGAAAGTCAGGTGCATGCTCTCTGTaGTTGGACATTTACACAGTCATCTTTAACTCAATT +
Preference number: 3 (lower is better)
Translates to: TSNFRKSGACSL*LDIYTVIFNSI
Trigger: AATTGAGTTAAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAAGTTTGATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR CCA 72 bp CAAGCTTTATTAACAACTGCCAACACTACCAAATTATaGCCTCAAGAGCATGCAACATCTTGTTCAGTTTTA +
Preference number: 3 (lower is better)
Translates to: QALLTTANTTKL*PQEHATSCSVL
Trigger: TAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGCAGTTGTTAATAAAGCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR CCA 72 bp CAAACTTTAGAAAGTCAGGTGCATGCTCTCTGTGCTTaGACATTTACACAGTCATCTTTAACTCAATTTTTA +
Preference number: 3 (lower is better)
Translates to: QTLESQVHALCA*TFTQSSLTQFL
Trigger: TAAAAATTGAGTTAAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAAGTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR GCA 72 bp ACTACAAAAGCTTACAACAAAAGCAATATATTCTGTTaGTATACTTTGCTCAAGAGAGAGAGGATCCCTATA +
Preference number: 3 (lower is better)
Translates to: TTKAYNKSNIFC*YTLLKRERIPI
Trigger: TATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACAGAATATATTGCTTTTGTTGTAAGCTTTTGTAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR GCA 72 bp ATACAATGTGATGCTAGGCTTAATGTGTCATTTCAATaGTGTTGTACATTATGCAGGGGAAATAATGTCTTA +
Preference number: 3 (lower is better)
Translates to: IQCDARLNVSFQ*CCTLCRGNNVL
Trigger: TAAGACATTATTTCCCCTGCATAATGTACAACAGCATTGAAATGACACATTAAGCCTAGCATCACATTGTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGCGCACTGGGGGTTCATaGTCGCGGTTCCCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLRTGGS*SRFPGA
Trigger: CGCCCCCGGGAACCGCGATCATGAACCCCCAGTGCG...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS-3UTR CCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGGCCGACGGGTGCCGCTaGCTTGGTGACCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLADGCR*LGDLDC
Trigger: GCAGTCCAGGTCACCAAGCCAGCGGCACCCGTCGGC...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGCCGCAACGGGCGCACTaGGGGTTCATGATCGCGGTT +
Preference number: 4 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLPQRAH*GFMIAV
Trigger: AACCGCGATCATGAACCCCCAGTGCGCCCGTTGCGG...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS-3UTR GCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGCAGACCCTAAGTGAATaGCACCCCGTTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLQTLSE*HPVAGH
Trigger: GTGACCTGCAACGGGGTGGCATTCACTTAGGGTCTG...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAAAGGGTTGCCGACGGGTaGCGCTGGCTTGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKRVADG*RWLGDL
Trigger: CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCT...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTCTGTTCTCTGCACTGTaGCGTACATCCAGCCATCGT +
Preference number: 4 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAALFSAL*RTSSHR
Trigger: ACGATGGCTGGATGTACGGCACAGTGCAGAGAACAG...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGCACTCCAGCTTCCATTaGTTCACTGGCTTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLHSSFH*FTGFCY
Trigger: GTAACAGAAGCCAGTGAAGCAATGGAAGCTGGAGTG...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGTTACAAATGCCTGTGTaGTGTATGGAGGTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLLQMPV*CMEVEE
Trigger: CTCCTCGACCTCCATACACCACACAGGCATTTGTAA...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp TCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGAGTGCCCTTGAGATGCTaGCGTCTCTGGTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SLAVSFMHEIPVAKPKVGVPLRC*RLWCSG
Trigger: GCCAGAGCACCAGAGACGTCAGCATCTCAAGGGCAC...TCCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR TCA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTTCCAAGAAACCACGGTaGGAGCCAAGAAGTGAACCA +
Preference number: 4 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAASKKPR*EPRSEP
Trigger: TGGTTCACTTCTTGGCTCTCACCGTGGTTTCTTGGA...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGTTACTGATTTGCTCCTaGGTCCTCTTCAGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLLLICS*VLFSLC
Trigger: ACAGAGACTGAAGAGGACTCAGGAGCAAATCAGTAA...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS-3UTR GCA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTCTGTACCGAAAGTACTaGTGGAATGGGATCGAGACC +
Preference number: 4 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAALYRKY*WNGIET
Trigger: GGTCTCGATCCCATTCCAGCAGTACTTTCGGTACAG...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR GCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGCTTGGTGACCTGGACTaGAGACTCTGGATGAAATTT +
Preference number: 4 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLLGDLD*RLWMKF
Trigger: AAATTTCATCCAGAGTCTGCAGTCCAGGTCACCAAG...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTAGGGTTGCCGACGGGTaGCGCTGGCTTGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: LTVSCEERVQKAWNTSETRVADG*RWLGDL
Trigger: CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCT...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAAAGAAAAACACAGGGTTaGCGACGGGTGCCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKRKTQG*RRVPLA
Trigger: AGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCT...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGCAGTTGACAGTTAGTTaGGAGGAAAGGGTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLQLTVS*EERVQK
Trigger: CTTTTGGACCCTTTCCTCGCAACTAACTGTCAACTG...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGTGTATTGTTTCTGGCTaGCCATCTCGGATGCTTTCT +
Preference number: 4 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLCIVSG*PSRMLS
Trigger: AGAAAGCATCCGAGATGGCCAGCCAGAAACAATACA...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGTTCTTGTATTGTTTCTaGCTGGCCATCTCGGATGCT +
Preference number: 4 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLFLYCF*LAISDA
Trigger: AGCATCCGAGATGGCCAGCCAGAAACAATACAAGAA...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGGTTTTTCTGATGAGCTaGCGACTAGAGGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLVFLMS*RLEEER
Trigger: CCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR TCA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTTATATTCTCGGCCGCTaGGCATTTTGCTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAAYILGR*AFCWLS
Trigger: TGAAAGCCAGCAAAATGCTCAGCGGCCGAGAATATA...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR TCA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTGTGCCGCTGGCTTGGTaGCCTGGACTGCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: LTVSCEERVQKAWNTSETVPLAW*PGLQTL
Trigger: CAGAGTCTGCAGTCCAGGTCACCAAGCCAGCGGCAC...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAAAAGTCAGACCCTAAGTaGATGCCACCCCGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKKSDPK*MPPRCR
Trigger: CCTGCAACGGGGTGGCATTCACTTAGGGTCTGACTT...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTAATAGGAACGCGCAGTaGAGCTGCCTATGTTACAGA +
Preference number: 4 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAANRNAQ*SCLCYR
Trigger: TCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATT...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTAAGGGTTGCCGACGGGTaGCGCTGGCTTGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLRVADG*RWLGDL
Trigger: CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCT...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTCACTCGTTCGATCTCTaGGCTATCTTTCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAAHSFDL*AIFHCS
Trigger: ACTGCAGTGAAAGATAGCCCAGAGATCGAACGAGTG...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTCTCAATGTAATTCGCTaGGAGCATTCCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAALNVIR*EHSCSP
Trigger: GGGAGAACAGGAATGCTCCCAGCGAATTACATTGAG...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR TCA 90 bp TCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGAAAGTCAGACCCTAAGTaGATGCCACCCCGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLAVSFMHEIPVAKPKVGKSDPK*MPPRCR
Trigger: CCTGCAACGGGGTGGCATTCACTTAGGGTCTGACTT...TCCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp TTCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGAAGTCAGACCCTAAGTaGATGCCACCCCGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: FFSCQLHARDTCCQTKGGKSDPK*MPPRCR
Trigger: CCTGCAACGGGGTGGCATTCACTTAGGGTCTGACTT...CCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTTCCCAGGAGCCGCTGTaGCATCCCCCGGCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLISQEPL*HPPASP
Trigger: GGGGCTCGCCGGGGGATGTCACAGCGGCTCCTGGGA...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS-3UTR GCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGCTGTCATTCCTGGTTTaGCGTCATTTAAGTAGTTTC +
Preference number: 4 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLLSFLV*RHLSSF
Trigger: GAAACTACTTAAATGACGGCAAACCAGGAATGACAG...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGTTGTTCATGTTGAGTaGCATCTTGCAGACCTCACA +
Preference number: 4 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAAVVHVE*HLADLT
Trigger: TGTGAGGTCTGCAAGATGGCACTCAACATGAACAAC...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS-3UTR CCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGAAACACTGTCAATTGTaGCTGGCATCCGCTTATAAA +
Preference number: 4 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLKHCQL*LASAYK
Trigger: TTTATAAGCGGATGCCAGCCACAATTGACAGTGTTT...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGATGATCTTAGAGATCTaGGTTGCCATCTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLMILEI*VAILMS
Trigger: AGACATCAAGATGGCAACCCAGATCTCTAAGATCAT...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp TCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGAGATCAAGGTCGAAGATaGAGCCAGGATCTGTGCGCC +
Preference number: 4 (lower is better)
Translates to: SLAVSFMHEIPVAKPKVGDQGRR*SQDLCA
Trigger: GGCGCACAGATCCTGGCTCCATCTTCGACCTTGATC...TCCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGTTAAGAGAATTGGCTTaGGGTGATTCCAAAGTGACA +
Preference number: 4 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLLRELA*GDSKVT
Trigger: TGTCACTTTGGAATCACCCCAAGCCAATTCTCTTAA...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAAGCCGACGGGTGCCGCTaGCTTGGTGACCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQADGCR*LGDLDC
Trigger: GCAGTCCAGGTCACCAAGCCAGCGGCACCCGTCGGC...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp ATCCTGACAAGCTTTATTAACAACTGCCAACACTACCAAATTATGGCCTCAAGAGCCGACGGGTGCCGCTaGCTTGGTGACCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: ILTSFINNCQHYQIMASRADGCR*LGDLDC
Trigger: GCAGTCCAGGTCACCAAGCCAGCGGCACCCGTCGGC...TCTTGAGGCCATAATTTGGTAGTGTTGGCAGTTGTTAATAAAGCTTGTCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp TTCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGATACCACAGTGCCCTTaGGATGCTGACGTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: FFSCQLHARDTCCQTKGGIPQCP*DADVSG
Trigger: ACCAGAGACGTCAGCATCTCAAGGGCACTGTGGTAT...CCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR TCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGGTTGTCTTAATTCTCTaGATTTCAGGAGTATCTGCT +
Preference number: 4 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLVVLIL*ISGVSA
Trigger: AGCAGATACTCCTGAAATTCAGAGAATTAAGACAAC...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR TCA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTACACTCCAGGTACGGGTaGCTCACACAGTCACTCGCG +
Preference number: 4 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLHSRYG*LTQSLA
Trigger: CGCGAGTGACTGTGTGAGTCACCCGTACCTGGAGTG...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS-3UTR GCA 90 bp GAAAATGCTGCTGTTTTCAGCCCAGAGGTCATTCCTTCTTCCTGGTACCTGTGTGCTGGCCATCTCGGATaGTTTCTTAGCTCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: ENAAVFSPEVIPSSWYLCAGHLG*FLSSLD
Trigger: GTCCAGAGAGCTAAGAAAGCATCCGAGATGGCCAGC...ACACAGGTACCAGGAAGAAGGAATGACCTCTGGGCTGAAAACAGCAGCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR GCA 90 bp TCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGATTTACCGCACTCAGCTaGTCCTGGTTTCGCCTCACT +
Preference number: 4 (lower is better)
Translates to: SLAVSFMHEIPVAKPKVGFTALS*SWFRLT
Trigger: AGTGAGGCGAAACCAGGAGCAGCTGAGTGCGGTAAA...TCCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp TCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGACTGTTCTCTGCACTGTaGCGTACATCCAGCCATCGT +
Preference number: 4 (lower is better)
Translates to: SLAVSFMHEIPVAKPKVGLFSAL*RTSSHR
Trigger: ACGATGGCTGGATGTACGGCACAGTGCAGAGAACAG...TCCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp AGATCTGCATCTTCTTCAAGAAATAAACCCAGTGGACAGAGAGGGGCTGGTCTACAGACCCTAAGTGAATaGCACCCCGTTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: RSASSSRNKPSGQRGAGLQTLSE*HPVAGH
Trigger: GTGACCTGCAACGGGGTGGCATTCACTTAGGGTCTG...TAGACCAGCCCCTCTCTGTCCACTGGGTTTATTTCTTGAAGAAGATGCAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp TCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGATGGGCAGCACGATGTTaGTCTAGTCCACCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: SLAVSFMHEIPVAKPKVGWAARC*SSPPRL
Trigger: AAGCCTTGGTGGACTAGAGCAACATCGTGCTGCCCA...TCCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTCTCTGCAATTCACTTTaGTGCTTCAGGCGAAGATTT +
Preference number: 4 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAALCNSL*CFRRRF
Trigger: AAATCTTCGCCTGAAGCAGCAAAGTGAATTGCAGAG...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS-3UTR CCA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGCCTTTCAGAAATAGATaGAAGAAGTCGGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLPFRNR*KKSAFS
Trigger: AGAAAATGCCGACTTCTTCCATCTATTTCTGAAAGG...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp CTGCATTTCAGTGTGATTAGAAATGCCCCTCCCTCAAAAGACAAGCCAACCACAATGCCATCCGTGCACTaGATCCGCCCATTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: LHFSVIRNAPPSKDKPTTMPSVH*IRPFLS
Trigger: GCTAAGGAATGGGCGGATCCAGTGCACGGATGGCAT...TGTGGTTGGCTTGTCTTTTGAGGGAGGGGCATTTCTAATCACACTGAAATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460652.1
ENST00000473616.5
ENST00000481592.5
3UTR CAA 72 bp CATAGGAGACCACTTGCAGGGAACACATTAAAGCCATaGCTGACACAGCCATCTGTCATTCCTGGTTTGCCG +
Preference number: 4 (lower is better)
Translates to: HRRPLAGNTLKP*LTQPSVIPGLP
Trigger: CGGCAAACCAGGAATGACAGATGGCTGTGTCAGCAATGGCTTTAATGTGTTCCCTGCAAGTGGTCTCCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCATATAGGCAGCATCGCTaGCCACCTGGGTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSYRQHR*PPGCSS
Trigger: GGAAGAACACCCAGGTGGTCAGCGATGCTGCCTATA...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR TCA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAAACTTATCCAGGCAGTTaGCTTTCTCGGTGGGATACA +
Preference number: 4 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKTYPGS*LSRWDT
Trigger: TGTATCCCACCGAGAAAGTCAACTGCCTGGATAAGT...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS-3UTR TCA 90 bp CGGATTAATAGTGAAGTAATGCCATCCGTGCACTGGATCCGCCCATTCCTTAGCCACTGCATTTCAGTGTaGTTAGAAATGCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: RINSEVMPSVHWIRPFLSHCISV*LEMPLP
Trigger: AGGGAGGGGCATTTCTAATCACACTGAAATGCAGTG...GCTAAGGAATGGGCGGATCCAGTGCACGGATGGCATTACTTCACTATTAATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR GCA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCCTATCTCCGGGGTCATaGTTACCGGAGTGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTLSPGS*LPEWPC
Trigger: ACAAGGCCACTCCGGTAAGCATGACCCCGGAGATAG...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR GCA 90 bp GAAAATGCTGCTGTTTTCAGCCCAGAGGTCATTCCTTCTTCCTGGTACCTGTGTAACGCGCAGTGCAGCTaGCTATGTTACAGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: ENAAVFSPEVIPSSWYLCNAQCS*LCYRSL
Trigger: CAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTT...ACACAGGTACCAGGAAGAAGGAATGACCTCTGGGCTGAAAACAGCAGCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTCAAACTGGGCTACACTaGAAGTGTGTAAACAATAAC +
Preference number: 4 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAAQTGLH*KCVNNN
Trigger: GTTATTGTTTACACACTTGCAGTGTAGCCCAGTTTG...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp GCAGGTGTATCTAAAATCAGACTTGGTCTACCTTTCATCTGTTTATGGTCCTGGATGCCCGCACTCAGCTaGTCCTGGTTTCGCCTCACT +
Preference number: 4 (lower is better)
Translates to: AGVSKIRLGLPFICLWSWMPALS*SWFRLT
Trigger: AGTGAGGCGAAACCAGGAGCAGCTGAGTGCGGGCAT...CCAGGACCATAAACAGATGAAAGGTAGACCAAGTCTGATTTTAGATACACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481592.5
CDS-3UTR GCA 90 bp ATGTTTCCACTGCATTTCAGTGTGATTAGAAATGCCCCTCCCTCAAAAGACAAGTGGACACGCAGTTCATaGCCGCACTCAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: MFPLHFSVIRNAPPSKDKWTRSS*PHSAAP
Trigger: AGGAGCAGCTGAGTGCGGGCATGAACTGCGTGTCCA...CTTGTCTTTTGAGGGAGGGGCATTTCTAATCACACTGAAATGCAGTGGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481592.5
CDS-3UTR CCA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCGCATCGCTGACCACCTaGGTGTTCTTCCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTASLTT*VFFLTL
Trigger: GAGAGTGAGGAAGAACACCCAGGTGGTCAGCGATGC...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAACTCAATGTAATTCGCTaGGAGCATTCCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKLNVIR*EHSCSP
Trigger: GGGAGAACAGGAATGCTCCCAGCGAATTACATTGAG...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTATTAACCCGTTTTGGTaGCTAGATTTCCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAAINPFW*LDFHSR
Trigger: TCTGGAATGGAAATCTAGCCACCAAAACGGGTTAAT...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp GAAAATGCTGCTGTTTTCAGCCCAGAGGTCATTCCTTCTTCCTGGTACCTGTGTTTGCCAAACCAAAGGTaGGAGGGAAGCACGTGGAAA +
Preference number: 4 (lower is better)
Translates to: ENAAVFSPEVIPSSWYLCLPNQR*EGSTWK
Trigger: TTTCCACGTGCTTCCCTCCCACCTTTGGTTTGGCAA...ACACAGGTACCAGGAAGAAGGAATGACCTCTGGGCTGAAAACAGCAGCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCAGAGGTCGAGGAGACCTaGGATCATCAAGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSEVEET*DHQEPP
Trigger: AGGAGGCTCTTGATGATCCCAGGTCTCCTCGACCTC...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCACTCACTCGCTATCTCTaGAGCCTTCTTGGCATGCTG +
Preference number: 4 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSLTRYL*SLLGML
Trigger: CAGCATGCCAAGAAGGCTGCAGAGATAGCGAGTGAG...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp TTCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGGGCTCGAAGGATATCTaGGATATCCATGCTCACTTG +
Preference number: 4 (lower is better)
Translates to: FFSCQLHARDTCCQTKGGGSKDI*DIHAHL
Trigger: CAAGTGAGCATGGATATCCCAGATATCCTTCGAGCC...CCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTCCTTTCATCTGTTTATaGTCCTGGGTATATTTTACC +
Preference number: 4 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAAPFICL*SWVYFT
Trigger: GGTAAAATATACCCAGGACCATAAACAGATGAAAGG...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTAGCATCGCTGACCACCTaGGTGTTCTTCCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLASLTT*VFFLTL
Trigger: GAGAGTGAGGAAGAACACCCAGGTGGTCAGCGATGC...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp TTCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGCATAGGTTAGTCCTTTaGGCAGCACGATGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: FFSCQLHARDTCCQTKGGHRLVL*AARCCS
Trigger: AGAGCAACATCGTGCTGCCCAAAGGACTAACCTATG...CCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp AGATCTGCATCTTCTTCAAGAAATAAACCCAGTGGACAGAGAGGGGCTGGTCTACATGTGGGCATAATCTaGGAATCCTTTGGCAGCATC +
Preference number: 4 (lower is better)
Translates to: RSASSSRNKPSGQRGAGLHVGII*ESFGSI
Trigger: GATGCTGCCAAAGGATTCTCAGATTATGCCCACATG...TAGACCAGCCCCTCTCTGTCCACTGGGTTTATTTCTTGAAGAAGATGCAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR TCA 90 bp GCCAACACTACCAAATTATGGCCTCAAGAGCATGCAACATCTTGTTCAGTTTTATATAGGCAGCATCGCTaGCCACCTGGGTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ANTTKLWPQEHATSCSVLYRQHR*PPGCSS
Trigger: GGAAGAACACCCAGGTGGTCAGCGATGCTGCCTATA...TAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTGTGCCGCTGGCTTGGTaGCCTGGACTGCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: LISLNITYKADIPKTRTSVPLAW*PGLQTL
Trigger: CAGAGTCTGCAGTCCAGGTCACCAAGCCAGCGGCAC...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR TCA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGGTGCCGCTGGCTTGGTaGCCTGGACTGCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGVPLAW*PGLQTL
Trigger: CAGAGTCTGCAGTCCAGGTCACCAAGCCAGCGGCAC...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR TCA 90 bp GAAAATGCTGCTGTTTTCAGCCCAGAGGTCATTCCTTCTTCCTGGTACCTGTGTTGGAGAATGGGACTGTaGTGCAGTTTTCTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: ENAAVFSPEVIPSSWYLCWRMGL*CSFLFS
Trigger: GGAAAAGAGAAAACTGCATCACAGTCCCATTCTCCA...ACACAGGTACCAGGAAGAAGGAATGACCTCTGGGCTGAAAACAGCAGCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAACTTTTGTACTTGACCTaGCTCTGCAATTCACTTTGC +
Preference number: 4 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKLLYLT*LCNSLC
Trigger: GCAAAGTGAATTGCAGAGTCAGGTCAAGTACAAAAG...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS-3UTR TCA 90 bp GTTAGTTATCGGATTAATAGTGAAGTAATGCCATCCGTGCACTGGATCCGCCCACACTGCATTTCAGTGTaGTTAGAAATGCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VSYRINSEVMPSVHWIRPHCISV*LEMPLP
Trigger: AGGGAGGGGCATTTCTAATCACACTGAAATGCAGTG...TGGGCGGATCCAGTGCACGGATGGCATTACTTCACTATTAATCCGATAACTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460652.1
ENST00000473616.5
ENST00000481592.5
CDS-3UTR GCA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTATGGTCGGTCAAGTTCTaGACTGTACGTGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLWSVKF*TVRVGV
Trigger: GACACCCACACGTACAGTGCAGAACTTGACCGACCA...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR GCA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCAACGCGCAGTGCAGCTaGCTATGTTACAGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTNAQCS*LCYRSL
Trigger: CAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTT...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp TCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGACTTGGTGACCTGGACTaGAGACTCTGGATGAAATTT +
Preference number: 4 (lower is better)
Translates to: SLAVSFMHEIPVAKPKVGLGDLD*RLWMKF
Trigger: AAATTTCATCCAGAGTCTGCAGTCCAGGTCACCAAG...TCCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp GCCAACACTACCAAATTATGGCCTCAAGAGCATGCAACATCTTGTTCAGTTTTAGCACTCAGCTGCTCCTaGTTTCGCCTCACTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ANTTKLWPQEHATSCSVLALSCS*FRLTLS
Trigger: AGAGAGAGTGAGGCGAAACCAGGAGCAGCTGAGTGC...TAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TTCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGGAAGCACGTGGAAAGTaGAAAAGTTGTTCAGGCATG +
Preference number: 4 (lower is better)
Translates to: FFSCQLHARDTCCQTKGGEARGK*KSCSGM
Trigger: CATGCCTGAACAACTTTTCCACTTTCCACGTGCTTC...CCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR CAA 72 bp AGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTaGAATCTACATGACATGCAACAGGGTAAATGCTAC +
Preference number: 4 (lower is better)
Translates to: RNAQCSCLCYRS*NLHDMQQGKCY
Trigger: GTAGCATTTACCCTGTTGCATGTCATGTAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
3UTR CAA 72 bp AAATCTCAGACCCGGGGTATTATTAGGGTGCATTGCTaGCATCTAACAACCCATGCTCCAAGAAACCACGGT +
Preference number: 4 (lower is better)
Translates to: KSQTRGIIRVHC*HLTTHAPRNHG
Trigger: ACCGTGGTTTCTTGGAGCATGGGTTGTTAGATGCAAGCAATGCACCCTAATAATACCCCGGGTCTGAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTAGAACAGGTGCAACAATaGTTCCAGGTCTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLEQVQQ*FQVSCP
Trigger: TGGACAGGAGACCTGGAATCATTGTTGCACCTGTTC...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS-3UTR GCA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAAAGATTTGGTGAATGCTaGATTGATCTCATGGATGAC +
Preference number: 4 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKRFGEC*IDLMDD
Trigger: GTCATCCATGAGATCAATGCAGCATTCACCAAATCT...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp TTTAGAAAGTCAGGTGCATGCTCTCTGTGCTTGGACATTTACACAGTCATCTTTGCACGAGATACCTGTTaGCAAACCAAAGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: FRKSGACSLCLDIYTVIFARDTC*QTKGGR
Trigger: CCTCCCACCTTTGGTTTGGCAACAGGTATCTCGTGC...AAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAACAAACTGGGCTACACTaGAAGTGTGTAAACAATAAC +
Preference number: 4 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKQTGLH*KCVNNN
Trigger: GTTATTGTTTACACACTTGCAGTGTAGCCCAGTTTG...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp AGATCTGCATCTTCTTCAAGAAATAAACCCAGTGGACAGAGAGGGGCTGGTCTAAACTGTGCTTACAAATaGCTGTGTGGTGTATGGAGG +
Preference number: 4 (lower is better)
Translates to: RSASSSRNKPSGQRGAGLNCAYK*LCGVWR
Trigger: CCTCCATACACCACACAGGCATTTGTAAGCACAGTT...TAGACCAGCCCCTCTCTGTCCACTGGGTTTATTTCTTGAAGAAGATGCAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAACATATTCCTACAAGGTaGTTGTGGAAACTGTGCTTA +
Preference number: 4 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKHIPTR*LWKLCL
Trigger: TAAGCACAGTTTCCACAAGCACCTTGTAGGAATATG...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp TCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGAGTGCTGCTTCCTAAATaGTCAGCAATTCATTGCATG +
Preference number: 4 (lower is better)
Translates to: SLAVSFMHEIPVAKPKVGVLLPK*SAIHCM
Trigger: CATGCAATGAATTGCTGAGCATTTAGGAAGCAGCAC...TCCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp AATCAGCTAACACCTTTAATATCTGAGGAGCATCCCACTTCCCTACCACAAAAATCTGCACTGTACGTGTaGGTGTCCTGCACGTCTTTC +
Preference number: 4 (lower is better)
Translates to: NQLTPLISEEHPTSLPQKSALYV*VSCTSF
Trigger: GAAAGACGTGCAGGACACCCACACGTACAGTGCAGA...TTTTTGTGGTAGGGAAGTGGGATGCTCCTCAGATATTAAAGGTGTTAGCTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCACGGCATTGCCTTTATaGTGCAGATGTTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTTALPL*CRCSTA
Trigger: TGCTGTGGAACATCTGCACCATAAAGGCAATGCCGT...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAAGCACTCAGCTGCTCCTaGTTTCGCCTCACTCTCTCT +
Preference number: 4 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQALSCS*FRLTLS
Trigger: AGAGAGAGTGAGGCGAAACCAGGAGCAGCTGAGTGC...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTCCTCTTCAGCTCTGGTaGATCAGAAATTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LTVSCEERVQKAWNTSETPLQLW*IRNCSS
Trigger: GGAACTGCAATTTCTGATCCACCAGAGCTGAAGAGG...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTTACCGAAAGTACTGCTaGAATGGGATCGAGACCAGT +
Preference number: 4 (lower is better)
Translates to: LTVSCEERVQKAWNTSETYRKYC*NGIETS
Trigger: ACTGGTCTCGATCCCATTCCAGCAGTACTTTCGGTA...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAATTAAGAGAATTGGCTTaGGGTGATTCCAAAGTGACA +
Preference number: 4 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKLRELA*GDSKVT
Trigger: TGTCACTTTGGAATCACCCCAAGCCAATTCTCTTAA...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp AGATCTGCATCTTCTTCAAGAAATAAACCCAGTGGACAGAGAGGGGCTGGTCTACTGGACTGCAGACTCTaGATGAAATTTCAAGACCCA +
Preference number: 4 (lower is better)
Translates to: RSASSSRNKPSGQRGAGLLDCRL*MKFQDP
Trigger: TGGGTCTTGAAATTTCATCCAGAGTCTGCAGTCCAG...TAGACCAGCCCCTCTCTGTCCACTGGGTTTATTTCTTGAAGAAGATGCAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTTGGGAGGGAAGCACGTaGAAAGTGGAAAAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LTVSCEERVQKAWNTSETWEGST*KVEKLF
Trigger: GAACAACTTTTCCACTTTCCACGTGCTTCCCTCCCA...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCATTACAAATGCCTGTGTaGTGTATGGAGGTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSLQMPV*CMEVEE
Trigger: CTCCTCGACCTCCATACACCACACAGGCATTTGTAA...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp GTGTATCTAAAATCAGACTTGGTCTACCTTTCATCTGTTTATGGTCCTGGGTATATGCCATCCGTGCACTaGATCCGCCCATTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: VYLKSDLVYLSSVYGPGYMPSVH*IRPFLS
Trigger: GCTAAGGAATGGGCGGATCCAGTGCACGGATGGCAT...ATACCCAGGACCATAAACAGATGAAAGGTAGACCAAGTCTGATTTTAGATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR TCA 90 bp AATCAGCTAACACCTTTAATATCTGAGGAGCATCCCACTTCCCTACCACAAAAATCTGGGTTGCCATCTTaGTGTCTGGTCGGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: NQLTPLISEEHPTSLPQKSGLPS*CLVGQV
Trigger: AACTTGACCGACCAGACATCAAGATGGCAACCCAGA...TTTTTGTGGTAGGGAAGTGGGATGCTCCTCAGATATTAAAGGTGTTAGCTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR TCA 90 bp GAAAATGCTGCTGTTTTCAGCCCAGAGGTCATTCCTTCTTCCTGGTACCTGTGTATTGCAGTTCCCCGTTaGAGTTCTCCCTTATATTTT +
Preference number: 4 (lower is better)
Translates to: ENAAVFSPEVIPSSWYLCIAVPR*SSPLYF
Trigger: AAAATATAAGGGAGAACTTCAACGGGGAACTGCAAT...ACACAGGTACCAGGAAGAAGGAATGACCTCTGGGCTGAAAACAGCAGCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAAAATCTCGGAGATTTCTaGCCTGTCGTCTCCGAGACC +
Preference number: 4 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQNLGDF*PVVSET
Trigger: GGTCTCGGAGACGACAGGTCAGAAATCTCCGAGATT...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR TCA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTGAAGTTATTTGGTCCTaGCATTCTGTGGAACTGAGC +
Preference number: 4 (lower is better)
Translates to: LTVSCEERVQKAWNTSETEVIWS*HSVELS
Trigger: GCTCAGTTCCACAGAATGTCAGGACCAAATAACTTC...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAATCAACTTTATGTCAGTaGCATATAGATGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKSTLCQ*HIDAAS
Trigger: TGAAGCTGCATCTATATGTCACTGACATAAAGTTGA...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR TCA 90 bp GCCAACACTACCAAATTATGGCCTCAAGAGCATGCAACATCTTGTTCAGTTTTATCCAAGAAACCACGGTaGGAGCCAAGAAGTGAACCA +
Preference number: 4 (lower is better)
Translates to: ANTTKLWPQEHATSCSVLSKKPR*EPRSEP
Trigger: TGGTTCACTTCTTGGCTCTCACCGTGGTTTCTTGGA...TAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCATGTAGTTGTTCATGTTaGGTGCCATCTTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSCSCSC*VPSCRP
Trigger: AGGTCTGCAAGATGGCACTCAACATGAACAACTACA...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS-3UTR GCA 90 bp TTTAGAAAGTCAGGTGCATGCTCTCTGTGCTTGGACATTTACACAGTCATCTTTCATCAAGAGTGTCTGTaGTCACCTGCATCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: FRKSGACSLCLDIYTVIFHQECL*SPASLS
Trigger: GGAAAGGGATGCAGGTGAGCACAGACACTCTTGATG...AAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR GCA 90 bp ATCCTGACAAGCTTTATTAACAACTGCCAACACTACCAAATTATGGCCTCAAGATGGGCTATCTTTCACTaGAGTGCCAGCTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: ILTSFINNCQHYQIMASRWAIFH*SASSHF
Trigger: GAAGTGGGAGCTGGCACTGCAGTGAAAGATAGCCCA...TCTTGAGGCCATAATTTGGTAGTGTTGGCAGTTGTTAATAAAGCTTGTCAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR GCA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAATTTACCGCACTCAGCTaGTCCTGGTTTCGCCTCACT +
Preference number: 4 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQEFTALS*SWFRLT
Trigger: AGTGAGGCGAAACCAGGAGCAGCTGAGTGCGGTAAA...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp CTCATAGCAGGTGTATCTAAAATCAGACTTGGTCTACCTTTCATCTGTTTATGGTTTACCGCACTCAGCTaGTCCTGGTTTCGCCTCACT +
Preference number: 4 (lower is better)
Translates to: LIAGVSKIRLGLPFICLWFTALS*SWFRLT
Trigger: AGTGAGGCGAAACCAGGAGCAGCTGAGTGCGGTAAA...CCATAAACAGATGAAAGGTAGACCAAGTCTGATTTTAGATACACCTGCTATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460652.1
CDS-3UTR GCA 90 bp AGATCTGCATCTTCTTCAAGAAATAAACCCAGTGGACAGAGAGGGGCTGGTCTACCTTCAAAACTAGAGTaGGATGCAGCAGGAAAATCT +
Preference number: 4 (lower is better)
Translates to: RSASSSRNKPSGQRGAGLPSKLE*DAAGKS
Trigger: AGATTTTCCTGCTGCATCGCACTCTAGTTTTGAAGG...TAGACCAGCCCCTCTCTGTCCACTGGGTTTATTTCTTGAAGAAGATGCAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGAGAAAAACACAGGGTTaGCGACGGGTGCCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: KFILCSESSLTIILSYNRRKTQG*RRVPLA
Trigger: AGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCT...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGAGAAAAACACAGGGTTaGCGACGGGTGCCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGRKTQG*RRVPLA
Trigger: AGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCT...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTAGAAAGTCAGGTGCATaGTCTCTGTGCTTGGACATT +
Preference number: 4 (lower is better)
Translates to: LTVSCEERVQKAWNTSETRKSGA*SLCLDI
Trigger: AATGTCCAAGCACAGAGAGCATGCACCTGACTTTCT...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp AGATCTGCATCTTCTTCAAGAAATAAACCCAGTGGACAGAGAGGGGCTGGTCTAAGGCAGCAACTTGCTTaGTTGGTTTTCTTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: RSASSSRNKPSGQRGAGLRQQLA*LVFFPR
Trigger: TCTTGGAAAGAAAACCAAGCAAGCAAGTTGCTGCCT...TAGACCAGCCCCTCTCTGTCCACTGGGTTTATTTCTTGAAGAAGATGCAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAATGGGCAGCACGATGTTaGTCTAGTCCACCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQWAARC*SSPPRL
Trigger: AAGCCTTGGTGGACTAGAGCAACATCGTGCTGCCCA...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp AGATCTGCATCTTCTTCAAGAAATAAACCCAGTGGACAGAGAGGGGCTGGTCTAATTCACCAATGTAAATaGACTGAAGGCAGCACACAC +
Preference number: 4 (lower is better)
Translates to: RSASSSRNKPSGQRGAGLIHQCK*TEGSTH
Trigger: GTGTGTGCTGCCTTCAGTGCATTTACATTGGTGAAT...TAGACCAGCCCCTCTCTGTCCACTGGGTTTATTTCTTGAAGAAGATGCAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCAGGCATGTTCAAAATCTaGTCTTCCAATTACAGCGGG +
Preference number: 4 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSGMFKI*SSNYSG
Trigger: CCCGCTGTAATTGGAAGACCAGATTTTGAACATGCC...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp TTCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGGCTCGCTTTGCTCTTTaGATATCAAGAACTTCTGAA +
Preference number: 4 (lower is better)
Translates to: FFSCQLHARDTCCQTKGGARFAL*ISRTSE
Trigger: TTCAGAAGTTCTTGATATCCAAAGAGCAAAGCGAGC...CCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCATCATGCTTACCGGAGTaGCCTTGTAGTTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSSCLPE*PCSFAL
Trigger: AAGAGCAAAACTACAAGGCCACTCCGGTAAGCATGA...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp GGTCTACCTTTCATCTGTTTATGGTCCTGGGTATATTTTACCGAGCTAATATTTGCACTCAGCTGCTCCTaGTTTCGCCTCACTCTCTCT +
Preference number: 4 (lower is better)
Translates to: GLPFICLWSWVYFTELIFALSCS*FRLTLS
Trigger: AGAGAGAGTGAGGCGAAACCAGGAGCAGCTGAGTGC...AAATATTAGCTCGGTAAAATATACCCAGGACCATAAACAGATGAAAGGTAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR CCA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGAAAGTACTGCTGGAATaGGATCGAGACCAGTGTCGC +
Preference number: 4 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQKVLLE*DRDQCR
Trigger: GCGACACTGGTCTCGATCCCATTCCAGCAGTACTTT...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTATCATGGATGACACACTaGTCTGGTGCATGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLSWMTH*SGACSH
Trigger: ATGGCTACATGCACCAGACCAGTGTGTCATCCATGA...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp GAAAATGCTGCTGTTTTCAGCCCAGAGGTCATTCCTTCTTCCTGGTACCTGTGTTTAAGAGAATTGGCTTaGGGTGATTCCAAAGTGACA +
Preference number: 4 (lower is better)
Translates to: ENAAVFSPEVIPSSWYLCLRELA*GDSKVT
Trigger: TGTCACTTTGGAATCACCCCAAGCCAATTCTCTTAA...ACACAGGTACCAGGAAGAAGGAATGACCTCTGGGCTGAAAACAGCAGCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTGTTTTTCTGATGAGCTaGCGACTAGAGGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LTVSCEERVQKAWNTSETVFLMS*RLEEER
Trigger: CCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp GAAAATGCTGCTGTTTTCAGCCCAGAGGTCATTCCTTCTTCCTGGTACCTGTGTATTAACCCGTTTTGGTaGCTAGATTTCCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: ENAAVFSPEVIPSSWYLCINPFW*LDFHSR
Trigger: TCTGGAATGGAAATCTAGCCACCAAAACGGGTTAAT...ACACAGGTACCAGGAAGAAGGAATGACCTCTGGGCTGAAAACAGCAGCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp GGTCTACCTTTCATCTGTTTATGGTCCTGGGTATATTTTACCGAGCTAATATTTATGCCATCCGTGCACTaGATCCGCCCATTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: GLPFICLWSWVYFTELIFMPSVH*IRPFLS
Trigger: GCTAAGGAATGGGCGGATCCAGTGCACGGATGGCAT...AAATATTAGCTCGGTAAAATATACCCAGGACCATAAACAGATGAAAGGTAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR TCA 90 bp TTCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGCAAATTTGGGAGATCTaGAACTGGATCATGCATATT +
Preference number: 4 (lower is better)
Translates to: FFSCQLHARDTCCQTKGGQIWEI*NWIMHI
Trigger: AATATGCATGATCCAGTTTCAGATCTCCCAAATTTG...CCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR TCA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCTCTTTATATTTCACCTaGCTTTGGAGGACGGCATTG +
Preference number: 4 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTSLYFT*LWRTAL
Trigger: CAATGCCGTCCTCCAAAGTCAGGTGAAATATAAAGA...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR TCA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGTATAGGCAGCATCGCTaGCCACCTGGGTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: KFILCSESSLTIILSYNRYRQHR*PPGCSS
Trigger: GGAAGAACACCCAGGTGGTCAGCGATGCTGCCTATA...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCACATTGTAACATTCCGTaGAGCCCCTTCATTTGCAAA +
Preference number: 4 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSHCNIP*SPFICK
Trigger: TTTGCAAATGAAGGGGCTTCACGGAATGTTACAATG...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGTATCTGCCACCGTGGTaGAGGACTGCTTCGGGTAGT +
Preference number: 4 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGYLPPW*RTASGS
Trigger: ACTACCCGAAGCAGTCCTTCACCACGGTGGCAGATA...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS-3UTR TCA 90 bp AGTTATCGGATTAATAGTGAAGTAATGCCATCCGTGCACTGGATCCGCCCATTCGTTGGACCCTACCATTaGAATATGATTTTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SYRINSEVMPSVHWIRPFVGPYH*NMILCF
Trigger: GAAGCACAAAATCATATTTCAATGGTAGGGTCCAAC...GAATGGGCGGATCCAGTGCACGGATGGCATTACTTCACTATTAATCCGATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460652.1
ENST00000473616.5
ENST00000481592.5
CDS-3UTR TCA 90 bp GTTAGTTATCGGATTAATAGTGAAGTAATGCCATCCGTGCACTGGATCCGCCCAGTTGGACCCTACCATTaGAATATGATTTTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: VSYRINSEVMPSVHWIRPVGPYH*NMILCF
Trigger: GAAGCACAAAATCATATTTCAATGGTAGGGTCCAAC...TGGGCGGATCCAGTGCACGGATGGCATTACTTCACTATTAATCCGATAACTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460652.1
ENST00000473616.5
ENST00000481592.5
CDS-3UTR TCA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGCAACAAACCCAACAATaGTTCCAGGTCTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQQQTQQ*FQVSCP
Trigger: TGGACAGGAGACCTGGAATCATTGTTGGGTTTGTTG...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676125.1
CDS-3UTR GCA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTGTATTCTTTCTCACTTaGCATTTCAGAGGCTCGCTT +
Preference number: 4 (lower is better)
Translates to: LTVSCEERVQKAWNTSETVFFLT*HFRGSL
Trigger: AAGCGAGCCTCTGAAATGGCAAGTGAGAAAGAATAC...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR GCA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTTATCTGGGATATCCATaGTCACTTGCATTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LTVSCEERVQKAWNTSETYLGYP*SLAFLS
Trigger: GGAAAGGAATGCAAGTGAGCATGGATATCCCAGATA...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR GCA 90 bp ACCTTTCATCTGTTTATGGTCCTGGGTATATTTTACCGAGCTAATATTTTCTTGCTATCTCCGGGGTCATaGTTACCGGAGTGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: TFHLFMVLGIFYRANIFLLSPGS*LPEWPC
Trigger: ACAAGGCCACTCCGGTAAGCATGACCCCGGAGATAG...CAAGAAAATATTAGCTCGGTAAAATATACCCAGGACCATAAACAGATGAAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460652.1
CDS-3UTR GCA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAAAACGCGCAGTGCAGCTaGCTATGTTACAGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQNAQCS*LCYRSL
Trigger: CAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTT...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTAAAACTAGAGTGCGATaGAGCAGGAAAATCTCAAGC +
Preference number: 4 (lower is better)
Translates to: LTVSCEERVQKAWNTSETKTRVR*SRKISS
Trigger: GCTTGAGATTTTCCTGCTGCATCGCACTCTAGTTTT...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp GCCAACACTACCAAATTATGGCCTCAAGAGCATGCAACATCTTGTTCAGTTTTACACTCCAGCTTCCATTaGTTCACTGGCTTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: ANTTKLWPQEHATSCSVLHSSFH*FTGFCY
Trigger: GTAACAGAAGCCAGTGAAGCAATGGAAGCTGGAGTG...TAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAATCAGTGACATATAGATaGAGCTTCAGTGTAATAAAG +
Preference number: 4 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKSVTYR*SFSVIK
Trigger: CTTTATTACACTGAAGCTGCATCTATATGTCACTGA...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGGGTGCATGCTCTCTGTaGTTGGACATTTACACAGTC +
Preference number: 4 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQGACSL*LDIYTV
Trigger: GACTGTGTAAATGTCCAAGCACAGAGAGCATGCACC...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCAAGGCAGCAACTTGCTTaGTTGGTTTTCTTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSRQQLA*LVFFPR
Trigger: TCTTGGAAAGAAAACCAAGCAAGCAAGTTGCTGCCT...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTATGCTCAGCAATTCATTaGATGGACACTGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLCSAIH*MDTGEW
Trigger: CCATTCTCCAGTGTCCATGCAATGAATTGCTGAGCA...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTAGCTTTCTTAGCTCTCTaGACATCAAGAGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLAFLAL*TSRVSV
Trigger: CACAGACACTCTTGATGTCCAGAGAGCTAAGAAAGC...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp ACCTTTCATCTGTTTATGGTCCTGGGTATATTTTACCGAGCTAATATTTTCTTGGCACTCAGCTGCTCCTaGTTTCGCCTCACTCTCTCT +
Preference number: 4 (lower is better)
Translates to: TFHLFMVLGIFYRANIFLALSCS*FRLTLS
Trigger: AGAGAGAGTGAGGCGAAACCAGGAGCAGCTGAGTGC...CAAGAAAATATTAGCTCGGTAAAATATACCCAGGACCATAAACAGATGAAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR CCA 90 bp AATCAGCTAACACCTTTAATATCTGAGGAGCATCCCACTTCCCTACCACAAAAATGCCCTCTTCAGCTCTaGTGGATCAGAAATTGCAGT +
Preference number: 4 (lower is better)
Translates to: NQLTPLISEEHPTSLPQKCPLQL*WIRNCS
Trigger: ACTGCAATTTCTGATCCACCAGAGCTGAAGAGGGCA...TTTTTGTGGTAGGGAAGTGGGATGCTCCTCAGATATTAAAGGTGTTAGCTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGGCATCGCTGACCACCTaGGTGTTCTTCCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: KFILCSESSLTIILSYNRASLTT*VFFLTL
Trigger: GAGAGTGAGGAAGAACACCCAGGTGGTCAGCGATGC...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp GCCAACACTACCAAATTATGGCCTCAAGAGCATGCAACATCTTGTTCAGTTTTAGCTGCATTGATCTCATaGATGACACACTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: ANTTKLWPQEHATSCSVLAALIS*MTHWSG
Trigger: ACCAGACCAGTGTGTCATCCATGAGATCAATGCAGC...TAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGGAGGTCGAGGAGACCTaGGATCATCAAGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KFILCSESSLTIILSYNREVEET*DHQEPP
Trigger: AGGAGGCTCTTGATGATCCCAGGTCTCCTCGACCTC...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCACCTACAAGGTGCTTGTaGAAACTGTGCTTACAAATG +
Preference number: 4 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSPTRCL*KLCLQM
Trigger: CATTTGTAAGCACAGTTTCCACAAGCACCTTGTAGG...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp TTCAGTGTGATTAGAAATGCCCCTCCCTCAAAAGACAAGCCAACCACATTTCCAATTGCAGTTCCCCGTTaGAGTTCTCCCTTATATTTT +
Preference number: 4 (lower is better)
Translates to: FSVIRNAPPSKDKPTTFPIAVPR*SSPLYF
Trigger: AAAATATAAGGGAGAACTTCAACGGGGAACTGCAAT...TGGAAATGTGGTTGGCTTGTCTTTTGAGGGAGGGGCATTTCTAATCACACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR TCA 90 bp GCCAACACTACCAAATTATGGCCTCAAGAGCATGCAACATCTTGTTCAGTTTTATACCTCACTGCAGCATaGAAAGCTAGGGTAAATCTC +
Preference number: 4 (lower is better)
Translates to: ANTTKLWPQEHATSCSVLYLTAA*KARVNL
Trigger: GAGATTTACCCTAGCTTTTCATGCTGCAGTGAGGTA...TAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR TCA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGGAAGTTATTTGGTCCTaGCATTCTGTGGAACTGAGC +
Preference number: 4 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQEVIWS*HSVELS
Trigger: GCTCAGTTCCACAGAATGTCAGGACCAAATAACTTC...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAAACTGCAGACTCTGGATaGAATTTCAAGACCCACCAG +
Preference number: 4 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQETADSG*NFKTHQ
Trigger: CTGGTGGGTCTTGAAATTTCATCCAGAGTCTGCAGT...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp TTTCCACTGCATTTCAGTGTGATTAGAAATGCCCCTCCCTCAAAAGACAAGCCAGTTGGACCCTACCATTaGAATATGATTTTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: FPLHFSVIRNAPPSKDKPVGPYH*NMILCF
Trigger: GAAGCACAAAATCATATTTCAATGGTAGGGTCCAAC...TGGCTTGTCTTTTGAGGGAGGGGCATTTCTAATCACACTGAAATGCAGTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000460652.1
ENST00000473616.5
ENST00000481592.5
CDS-3UTR GCA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGCTGTTCTCTGCACTGTaGCGTACATCCAGCCATCGT +
Preference number: 4 (lower is better)
Translates to: KFILCSESSLTIILSYNRLFSAL*RTSSHR
Trigger: ACGATGGCTGGATGTACGGCACAGTGCAGAGAACAG...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCAATCAGTCACCCTTTTTaGTTCAATAATAGGAACGCG +
Preference number: 4 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSISHPF*FNNRNA
Trigger: CGCGTTCCTATTATTGAAGCAAAAAGGGTGACTGAT...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp GAAAATGCTGCTGTTTTCAGCCCAGAGGTCATTCCTTCTTCCTGGTACCTGTGTTCAGTGACATATAGATaGAGCTTCAGTGTAATAAAG +
Preference number: 4 (lower is better)
Translates to: ENAAVFSPEVIPSSWYLCSVTYR*SFSVIK
Trigger: CTTTATTACACTGAAGCTGCATCTATATGTCACTGA...ACACAGGTACCAGGAAGAAGGAATGACCTCTGGGCTGAAAACAGCAGCATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGGCACGAGATACCTGTTaGCAAACCAAAGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGARDTC*QTKGGR
Trigger: CCTCCCACCTTTGGTTTGGCAACAGGTATCTCGTGC...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp GCCAACACTACCAAATTATGGCCTCAAGAGCATGCAACATCTTGTTCAGTTTTAAGAAAGTCAGGTGCATaGTCTCTGTGCTTGGACATT +
Preference number: 4 (lower is better)
Translates to: ANTTKLWPQEHATSCSVLRKSGA*SLCLDI
Trigger: AATGTCCAAGCACAGAGAGCATGCACCTGACTTTCT...TAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTAGTGCTGCTTCCTAAATaGTCAGCAATTCATTGCATG +
Preference number: 4 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLVLLPK*SAIHCM
Trigger: CATGCAATGAATTGCTGAGCATTTAGGAAGCAGCAC...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAATGCCATCTTGATGTCTaGTCGGTCAAGTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQCHLDV*SVKFCT
Trigger: AGTGCAGAACTTGACCGACCAGACATCAAGATGGCA...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp AATCAGACTTGGTCTACCTTTCATCTGTTTATGGTCCTGGGTATATTTTACCGACCTCTTCAGCTCTGGTaGATCAGAAATTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: NQTWSTFHLFMVLGIFYRPLQLW*IRNCSS
Trigger: GGAACTGCAATTTCTGATCCACCAGAGCTGAAGAGG...TCGGTAAAATATACCCAGGACCATAAACAGATGAAAGGTAGACCAAGTCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR CCA 90 bp GTGTATCTAAAATCAGACTTGGTCTACCTTTCATCTGTTTATGGTCCTGGGTATTGCCCTCTTCAGCTCTaGTGGATCAGAAATTGCAGT +
Preference number: 4 (lower is better)
Translates to: VYLKSDLVYLSSVYGPGYCPLQL*WIRNCS
Trigger: ACTGCAATTTCTGATCCACCAGAGCTGAAGAGGGCA...ATACCCAGGACCATAAACAGATGAAAGGTAGACCAAGTCTGATTTTAGATACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR CCA 90 bp AGTTATCGGATTAATAGTGAAGTAATGCCATCCGTGCACTGGATCCGCCCATTCATCTGTTTATGGTCCTaGGTATATTTTACCGAGCTA +
Preference number: 4 (lower is better)
Translates to: SYRINSEVMPSVHWIRPFICLWS*VYFTEL
Trigger: TAGCTCGGTAAAATATACCCAGGACCATAAACAGAT...GAATGGGCGGATCCAGTGCACGGATGGCATTACTTCACTATTAATCCGATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460652.1
ENST00000473616.5
ENST00000481592.5
CDS-3UTR CCA 90 bp CTGCATTTCAGTGTGATTAGAAATGCCCCTCCCTCAAAAGACAAGCCAACCACACCTTTCATCTGTTTATaGTCCTGGGTATATTTTACC +
Preference number: 4 (lower is better)
Translates to: LHFSVIRNAPPSKDKPTTPFICL*SWVYFT
Trigger: GGTAAAATATACCCAGGACCATAAACAGATGAAAGG...TGTGGTTGGCTTGTCTTTTGAGGGAGGGGCATTTCTAATCACACTGAAATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000460652.1
ENST00000473616.5
ENST00000481592.5
CDS-3UTR CCA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAATCATGGATGACACACTaGTCTGGTGCATGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQESWMTH*SGACSH
Trigger: ATGGCTACATGCACCAGACCAGTGTGTCATCCATGA...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp GCCAACACTACCAAATTATGGCCTCAAGAGCATGCAACATCTTGTTCAGTTTTAGTTTTTCTGATGAGCTaGCGACTAGAGGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: ANTTKLWPQEHATSCSVLVFLMS*RLEEER
Trigger: CCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC...TAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCATTGATTAACCCGTTTTaGTGGCTAGATTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSLINPF*WLDFHS
Trigger: GGAATGGAAATCTAGCCACCAAAACGGGTTAATCAA...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp TTTAGAAAGTCAGGTGCATGCTCTCTGTGCTTGGACATTTACACAGTCATCTTTCTGGACTGCAGACTCTaGATGAAATTTCAAGACCCA +
Preference number: 4 (lower is better)
Translates to: FRKSGACSLCLDIYTVIFLDCRL*MKFQDP
Trigger: TGGGTCTTGAAATTTCATCCAGAGTCTGCAGTCCAG...AAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp GCCAACACTACCAAATTATGGCCTCAAGAGCATGCAACATCTTGTTCAGTTTTAGAAGCACGTGGAAAGTaGAAAAGTTGTTCAGGCATG +
Preference number: 4 (lower is better)
Translates to: ANTTKLWPQEHATSCSVLEARGK*KSCSGM
Trigger: CATGCCTGAACAACTTTTCCACTTTCCACGTGCTTC...TAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAATGGGAGGGAAGCACGTaGAAAGTGGAAAAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQEWEGST*KVEKLF
Trigger: GAACAACTTTTCCACTTTCCACGTGCTTCCCTCCCA...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TATCTAAAATCAGACTTGGTCTACCTTTCATCTGTTTATGGTCCTGGGTATATTCAGTCCCAAATTTCCTaGACACGCAGTTCATGCCCG +
Preference number: 4 (lower is better)
Translates to: YLKSDLVYLSSVYGPGYIQSQIS*TRSSCP
Trigger: CGGGCATGAACTGCGTGTCCAGGAAATTTGGGACTG...AATATACCCAGGACCATAAACAGATGAAAGGTAGACCAAGTCTGATTTTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481592.5
3UTR CAA 72 bp TCAAACATCAAGTTTCACACCATGCCTGTAATAGACTaGGTGCTGCTTCCTAAATGCTCAGCAATTCATTGC +
Preference number: 4 (lower is better)
Translates to: SNIKFHTMPVID*VLLPKCSAIHC
Trigger: GCAATGAATTGCTGAGCATTTAGGAAGCAGCACCAAGTCTATTACAGGCATGGTGTGAAACTTGATGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTGAACTAATATTCTGCTaGTTTTTCTTCACTCGTTCG +
Preference number: 4 (lower is better)
Translates to: LTVSCEERVQKAWNTSETELIFC*FFFTRS
Trigger: CGAACGAGTGAAGAAAAATCAGCAGAATATTAGTTC...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR TCA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCAAAAGCAAAACGGGTTTaGAATTATTGGCTGCATTAC +
Preference number: 4 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSKAKRV*NYWLHY
Trigger: GTAATGCAGCCAATAATTTCAAACCCGTTTTGCTTT...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR TCA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCATATGTTACAGAAGCTTaGATCTACATGACATGCAAC +
Preference number: 4 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSYVTEA*IYMTCN
Trigger: GTTGCATGTCATGTAGATTCAAGCTTCTGTAACATA...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR TCA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCAATGGCCTGCCTGGGTaGAATGTAAATATATACTTA +
Preference number: 4 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTNGLPG*NVNIYL
Trigger: TAAGTATATATTTACATTTCACCCAGGCAGGCCATT...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp ATCCTGACAAGCTTTATTAACAACTGCCAACACTACCAAATTATGGCCTCAAGAAACACCTTTAATATCTaGGGAGCATCCCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: ILTSFINNCQHYQIMASRNTFNI*GASHFP
Trigger: AGGGAAGTGGGATGCTCCTCAGATATTAAAGGTGTT...TCTTGAGGCCATAATTTGGTAGTGTTGGCAGTTGTTAATAAAGCTTGTCAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp AATCAGCTAACACCTTTAATATCTGAGGAGCATCCCACTTCCCTACCACAAAAACATTGTAACATTCCGTaGAGCCCCTTCATTTGCAAA +
Preference number: 4 (lower is better)
Translates to: NQLTPLISEEHPTSLPQKHCNIP*SPFICK
Trigger: TTTGCAAATGAAGGGGCTTCACGGAATGTTACAATG...TTTTTGTGGTAGGGAAGTGGGATGCTCCTCAGATATTAAAGGTGTTAGCTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp GTATCTAAAATCAGACTTGGTCTACCTTTCATCTGTTTATGGTCCTGGGTATATCACTGCATTTCAGTGTaGTTAGAAATGCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VSKIRLGLPFICLWSWVYHCISV*LEMPLP
Trigger: AGGGAGGGGCATTTCTAATCACACTGAAATGCAGTG...ATATACCCAGGACCATAAACAGATGAAAGGTAGACCAAGTCTGATTTTAGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR GCA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCACTGTGTAACTTCTCCTaGAAAAACACTGTCAATTGT +
Preference number: 4 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSLCNFS*KNTVNC
Trigger: ACAATTGACAGTGTTTTTGCAGGAGAAGTTACACAG...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR GCA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGGCCTTCTTGGCATGCTaGATTTCAAGGGTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGAFLAC*ISRVSV
Trigger: CACTGACACCCTTGAAATGCAGCATGCCAAGAAGGC...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR GCA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAATATCTTTCACTGCAGTaGCAGCTCCCACTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQYLSLQ*QLPLLS
Trigger: AGAAAGAAGTGGGAGCTGGCACTGCAGTGAAAGATA...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR GCA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTAATCAGTCACCCTTTTTaGTTCAATAATAGGAACGCG +
Preference number: 4 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLISHPF*FNNRNA
Trigger: CGCGTTCCTATTATTGAAGCAAAAAGGGTGACTGAT...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp TTTAGAAAGTCAGGTGCATGCTCTCTGTGCTTGGACATTTACACAGTCATCTTTCCTTCAAAACTAGAGTaGGATGCAGCAGGAAAATCT +
Preference number: 4 (lower is better)
Translates to: FRKSGACSLCLDIYTVIFPSKLE*DAAGKS
Trigger: AGATTTTCCTGCTGCATCGCACTCTAGTTTTGAAGG...AAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp AATCAGCTAACACCTTTAATATCTGAGGAGCATCCCACTTCCCTACCACAAAAATCTGTTGCTATACTTTaGTCAAGAGAGAGAGGATCC +
Preference number: 4 (lower is better)
Translates to: NQLTPLISEEHPTSLPQKSVAIL*SRERGS
Trigger: GGATCCTCTCTCTCTTGAGCAAAGTATAGCAACAGA...TTTTTGTGGTAGGGAAGTGGGATGCTCCTCAGATATTAAAGGTGTTAGCTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAACAGTTGACAGTTAGTTaGGAGGAAAGGGTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQQLTVS*EERVQK
Trigger: CTTTTGGACCCTTTCCTCGCAACTAACTGTCAACTG...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGATTCACCAATGTAAATaGACTGAAGGCAGCACACAC +
Preference number: 4 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQIHQCK*TEGSTH
Trigger: GTGTGTGCTGCCTTCAGTGCATTTACATTGGTGAAT...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTATGCAATTCACTTTGCTaGTTCAGGCGAAGATTTTCA +
Preference number: 4 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLCNSLC*FRRRFS
Trigger: TGAAAATCTTCGCCTGAAGCAGCAAAGTGAATTGCA...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS-3UTR GCA 90 bp GTGATTAGAAATGCCCCTCCCTCAAAAGACAAGCCAACCACATTTCCATGCTTTCCAACCACATTTCCATaGTTTGTTAGTTATCGGATT +
Preference number: 4 (lower is better)
Translates to: VIRNAPPSKDKPTTFPCFPTTFP*FVSYRI
Trigger: AATCCGATAACTAACAAAGCATGGAAATGTGGTTGG...AAAGCATGGAAATGTGGTTGGCTTGTCTTTTGAGGGAGGGGCATTTCTAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460652.1
ENST00000473616.5
ENST00000481592.5
CDS-3UTR CCA 90 bp TTTAGAAAGTCAGGTGCATGCTCTCTGTGCTTGGACATTTACACAGTCATCTTTACTGTCAATTGTGGCTaGCATCCGCTTATAAAGAGA +
Preference number: 4 (lower is better)
Translates to: FRKSGACSLCLDIYTVIFTVNCG*HPLIKR
Trigger: TCTCTTTATAAGCGGATGCCAGCCACAATTGACAGT...AAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTTCTCTGCAGCCTTCTTaGCATGCTGCATTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: LISLNITYKADIPKTRTSSLQPS*HAAFQG
Trigger: CCCTTGAAATGCAGCATGCCAAGAAGGCTGCAGAGA...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp GGTCTACCTTTCATCTGTTTATGGTCCTGGGTATATTTTACCGAGCTAATATTTCCTCTTCAGCTCTGGTaGATCAGAAATTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GLPFICLWSWVYFTELIFPLQLW*IRNCSS
Trigger: GGAACTGCAATTTCTGATCCACCAGAGCTGAAGAGG...AAATATTAGCTCGGTAAAATATACCCAGGACCATAAACAGATGAAAGGTAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR CCA 90 bp GAGGTACATCCCTTGAACTTCCACTATCTTTTTAGAAAAAGTCTTGTTCCTCATCCTCTTCAGCTCTGGTaGATCAGAAATTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: EVHPLNFHYLFRKSLVPHPLQLW*IRNCSS
Trigger: GGAACTGCAATTTCTGATCCACCAGAGCTGAAGAGG...ATGAGGAACAAGACTTTTTCTAAAAAGATAGTGGAAGTTCAAGGGATGTACCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCATCTGTTTATGGTCCTaGGTATATTTTACCGAGCTA +
Preference number: 4 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTICLWS*VYFTEL
Trigger: TAGCTCGGTAAAATATACCCAGGACCATAAACAGAT...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAACACTGTAATCGTACATaGCTCGGTAGGTCCTTAGAT +
Preference number: 4 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQEHCNRT*LGRSLD
Trigger: ATCTAAGGACCTACCGAGCCATGTACGATTACAGTG...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTATTGATTAACCCGTTTTaGTGGCTAGATTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLLINPF*WLDFHS
Trigger: GGAATGGAAATCTAGCCACCAAAACGGGTTAATCAA...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGTTGCCAAACCAAAGGTaGGAGGGAAGCACGTGGAAA +
Preference number: 4 (lower is better)
Translates to: KFILCSESSLTIILSYNRLPNQR*EGSTWK
Trigger: TTTCCACGTGCTTCCCTCCCACCTTTGGTTTGGCAA...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TTTAGAAAGTCAGGTGCATGCTCTCTGTGCTTGGACATTTACACAGTCATCTTTCATGCTCTCTGTGCTTaGACATTTACACAGTCATCT +
Preference number: 4 (lower is better)
Translates to: FRKSGACSLCLDIYTVIFHALCA*TFTQSS
Trigger: AGATGACTGTGTAAATGTCCAAGCACAGAGAGCATG...AAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp ATCCTGACAAGCTTTATTAACAACTGCCAACACTACCAAATTATGGCCTCAAGACAAGAGCCTCCTCCATaGGCAGTTGATAACCAAATA +
Preference number: 4 (lower is better)
Translates to: ILTSFINNCQHYQIMASRQEPPP*AVDNQI
Trigger: TATTTGGTTATCAACTGCCCATGGAGGAGGCTCTTG...TCTTGAGGCCATAATTTGGTAGTGTTGGCAGTTGTTAATAAAGCTTGTCAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGTGGACAGAGAGGGGCTaGTCTAATCTTATCCATATT +
Preference number: 4 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQWTERG*SNLIHI
Trigger: AATATGGATAAGATTAGACCAGCCCCTCTCTGTCCA...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTATTGCAGACCTCACAATaGAAACATCCTTTATGCCAA +
Preference number: 4 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLLQTSQ*KHPLCQ
Trigger: TTGGCATAAAGGATGTTTCCATTGTGAGGTCTGCAA...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS-3UTR CCA 90 bp TTCAGTGTGATTAGAAATGCCCCTCCCTCAAAAGACAAGCCAACCACATTTCCAGTTTTAAGAATGATCTaGTTGGACCCTACCATTGAA +
Preference number: 4 (lower is better)
Translates to: FSVIRNAPPSKDKPTTFPVLRMI*LDPTIE
Trigger: TTCAATGGTAGGGTCCAACCAGATCATTCTTAAAAC...TGGAAATGTGGTTGGCTTGTCTTTTGAGGGAGGGGCATTTCTAATCACACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000460652.1
ENST00000473616.5
ENST00000481592.5
CDS-3UTR TCA 90 bp GCCAACACTACCAAATTATGGCCTCAAGAGCATGCAACATCTTGTTCAGTTTTAATTGCAGTTCCCCGTTaGAGTTCTCCCTTATATTTT +
Preference number: 4 (lower is better)
Translates to: ANTTKLWPQEHATSCSVLIAVPR*SSPLYF
Trigger: AAAATATAAGGGAGAACTTCAACGGGGAACTGCAAT...TAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTACTGCAGACTCTGGATaGAATTTCAAGACCCACCAG +
Preference number: 4 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLITADSG*NFKTHQ
Trigger: CTGGTGGGTCTTGAAATTTCATCCAGAGTCTGCAGT...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR TCA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGACTGCAGACTCTGGATaGAATTTCAAGACCCACCAG +
Preference number: 4 (lower is better)
Translates to: KFILCSESSLTIILSYNRTADSG*NFKTHQ
Trigger: CTGGTGGGTCTTGAAATTTCATCCAGAGTCTGCAGT...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAAGCCTTGAAGGGTTTGTaGGTGACTGTACTATACAAT +
Preference number: 4 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQEALKGL*VTVLYN
Trigger: ATTGTATAGTACAGTCACTCACAAACCCTTCAAGGC...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTCTTAGAGATCTGGGTTaGCATCTTGATGTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: LISLNITYKADIPKTRTSLRDLG*HLDVWS
Trigger: CGACCAGACATCAAGATGGCAACCCAGATCTCTAAG...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR GCA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAATTCAGAGGCTCGCTTTaGTCTTTGGATATCAAGAAC +
Preference number: 4 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQFRGSL*SLDIKN
Trigger: GTTCTTGATATCCAAAGAGCAAAGCGAGCCTCTGAA...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR GCA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGTTTCAAGGGTGTCAGTaGCAGCTTGCATTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGFQGCQ*QLAFLS
Trigger: GGAAAGGAATGCAAGCTGGCACTGACACCCTTGAAA...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR GCA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGAGATTTGGTGAATGCTaGATTGATCTCATGGATGAC +
Preference number: 4 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQRFGEC*IDLMDD
Trigger: GTCATCCATGAGATCAATGCAGCATTCACCAAATCT...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTAATAGGAACGCGCAGTaGAGCTGCCTATGTTACAGA +
Preference number: 4 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLINRNAQ*SCLCYR
Trigger: TCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATT...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTCACTCCAGCTTCCATTaGTTCACTGGCTTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: LISLNITYKADIPKTRTSHSSFH*FTGFCY
Trigger: GTAACAGAAGCCAGTGAAGCAATGGAAGCTGGAGTG...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTGGTGCATGCTCTCTGTaGTTGGACATTTACACAGTC +
Preference number: 4 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLIGACSL*LDIYTV
Trigger: GACTGTGTAAATGTCCAAGCACAGAGAGCATGCACC...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAATCTGTTGCTATACTTTaGTCAAGAGAGAGAGGATCC +
Preference number: 4 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQSVAIL*SRERGS
Trigger: GGATCCTCTCTCTCTTGAGCAAAGTATAGCAACAGA...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTTCCGGGAAGAACAGGTaGAACAATGATTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLISGKNR*NNDSRS
Trigger: AGACCTGGAATCATTGTTGCACCTGTTCTTCCCGGA...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS-3UTR CCA 90 bp TATCTAAAATCAGACTTGGTCTACCTTTCATCTGTTTATGGTCCTGGGTATATTTGCCCTCTTCAGCTCTaGTGGATCAGAAATTGCAGT +
Preference number: 4 (lower is better)
Translates to: YLKSDLVYLSSVYGPGYICPLQL*WIRNCS
Trigger: ACTGCAATTTCTGATCCACCAGAGCTGAAGAGGGCA...AATATACCCAGGACCATAAACAGATGAAAGGTAGACCAAGTCTGATTTTAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR CCA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGTGCCCTCTTCAGCTCTaGTGGATCAGAAATTGCAGT +
Preference number: 4 (lower is better)
Translates to: KFILCSESSLTIILSYNRCPLQL*WIRNCS
Trigger: ACTGCAATTTCTGATCCACCAGAGCTGAAGAGGGCA...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp ATGTTTCCACTGCATTTCAGTGTGATTAGAAATGCCCCTCCCTCAAAAGACAAGCCTTTCATCTGTTTATaGTCCTGGGTATATTTTACC +
Preference number: 4 (lower is better)
Translates to: MFPLHFSVIRNAPPSKDKPFICL*SWVYFT
Trigger: GGTAAAATATACCCAGGACCATAAACAGATGAAAGG...CTTGTCTTTTGAGGGAGGGGCATTTCTAATCACACTGAAATGCAGTGGAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000460652.1
ENST00000473616.5
ENST00000481592.5
CDS-3UTR CCA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTTCATGGATGACACACTaGTCTGGTGCATGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: LISLNITYKADIPKTRTSSWMTH*SGACSH
Trigger: ATGGCTACATGCACCAGACCAGTGTGTCATCCATGA...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTGCTGCATTGATCTCATaGATGACACACTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LISLNITYKADIPKTRTSAALIS*MTHWSG
Trigger: ACCAGACCAGTGTGTCATCCATGAGATCAATGCAGC...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGCTCAATGTAATTCGCTaGGAGCATTCCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGLNVIR*EHSCSP
Trigger: GGGAGAACAGGAATGCTCCCAGCGAATTACATTGAG...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGATTAACCCGTTTTGGTaGCTAGATTTCCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQINPFW*LDFHSR
Trigger: TCTGGAATGGAAATCTAGCCACCAAAACGGGTTAAT...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGAACACTACCAAATTATaGCCTCAAGAGCATGCAACA +
Preference number: 4 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQNTTKL*PQEHAT
Trigger: TGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTT...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp ATCCTGACAAGCTTTATTAACAACTGCCAACACTACCAAATTATGGCCTCAAGACCTACAAGGTGCTTGTaGAAACTGTGCTTACAAATG +
Preference number: 4 (lower is better)
Translates to: ILTSFINNCQHYQIMASRPTRCL*KLCLQM
Trigger: CATTTGTAAGCACAGTTTCCACAAGCACCTTGTAGG...TCTTGAGGCCATAATTTGGTAGTGTTGGCAGTTGTTAATAAAGCTTGTCAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGAGGGTCCAAAAGGCATaGAATACTTCAGAGACTTTT +
Preference number: 4 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQRVQKA*NTSETF
Trigger: AAAAGTCTCTGAAGTATTCCATGCCTTTTGGACCCT...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTCATAGGTTAGTCCTTTaGGCAGCACGATGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LISLNITYKADIPKTRTSHRLVL*AARCCS
Trigger: AGAGCAACATCGTGCTGCCCAAAGGACTAACCTATG...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR CAA 72 bp AAGTGTATCAAACTGTTCCTTGTGCTTCTGTCAGGCTaGAGAACACATCAAACTTTAGAAAGTCAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: KCIKLFLVLLSG*RTHQTLESQVH
Trigger: ATGCACCTGACTTTCTAAAGTTTGATGTGTTCTCAAGCCTGACAGAAGCACAAGGAACAGTTTGATACACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
3UTR CAA 72 bp AAAACACAGAATATTAAGACCCTGAAGAGAGTGCATTaGAGAACGCAGTTCTATCATAGGAGACCACTTGCA +
Preference number: 4 (lower is better)
Translates to: KTQNIKTLKRVH*RTQFYHRRPLA
Trigger: TGCAAGTGGTCTCCTATGATAGAACTGCGTTCTCAAATGCACTCTCTTCAGGGTCTTAATATTCTGTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGGCCTCCTTTGAAGCTTaGTATGATGGTGTCTCAACA +
Preference number: 4 (lower is better)
Translates to: KFILCSESSLTIILSYNRASFEA*YDGVST
Trigger: TGTTGAGACACCATCATATCAAGCTTCAAAGGAGGC...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR TCA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAACCCTCAGAAGGTTGGTaGTGTACTTTACATGTAAAA +
Preference number: 4 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQPSEGW*CTLHVK
Trigger: TTTTACATGTAAAGTACATCACCAACCTTCTGAGGG...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR TCA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGAAAGCAAAACGGGTTTaGAATTATTGGCTGCATTAC +
Preference number: 4 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQKAKRV*NYWLHY
Trigger: GTAATGCAGCCAATAATTTCAAACCCGTTTTGCTTT...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGGAAGTTATTTGGTCCTaGCATTCTGTGGAACTGAGC +
Preference number: 4 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGEVIWS*HSVELS
Trigger: GCTCAGTTCCACAGAATGTCAGGACCAAATAACTTC...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR TCA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGTCAACTTTATGTCAGTaGCATATAGATGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQSTLCQ*HIDAAS
Trigger: TGAAGCTGCATCTATATGTCACTGACATAAAGTTGA...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAAACGAGGTACATCCCTTaGACTTCCACTATCTTTTTA +
Preference number: 4 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQETRYIP*TSTIFL
Trigger: TAAAAAGATAGTGGAAGTTCAAGGGATGTACCTCGT...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTAACACCTTTAATATCTaGGGAGCATCCCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLINTFNI*GASHFP
Trigger: AGGGAAGTGGGATGCTCCTCAGATATTAAAGGTGTT...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTTGGAGAATGGGACTGTaGTGCAGTTTTCTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLIWRMGL*CSFLFS
Trigger: GGAAAAGAGAAAACTGCATCACAGTCCCATTCTCCA...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTGCATTGCCTTTATGGTaGAGATGTTCCACAGCATCT +
Preference number: 4 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLIALPLW*RCSTAS
Trigger: AGATGCTGTGGAACATCTGCACCATAAAGGCAATGC...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR GCA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGTTTGGAGGACGGCATTaGCTTTATGGTGCAGATGTT +
Preference number: 4 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGFGGRH*LYGADV
Trigger: AACATCTGCACCATAAAGGCAATGCCGTCCTCCAAA...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR GCA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAAAGATTTGGTGAATGCTaGATTGATCTCATGGATGAC +
Preference number: 4 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQERFGEC*IDLMDD
Trigger: GTCATCCATGAGATCAATGCAGCATTCACCAAATCT...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp GAGGTACATCCCTTGAACTTCCACTATCTTTTTAGAAAAAGTCTTGTTCCTCATAAAACTAGAGTGCGATaGAGCAGGAAAATCTCAAGC +
Preference number: 4 (lower is better)
Translates to: EVHPLNFHYLFRKSLVPHKTRVR*SRKISS
Trigger: GCTTGAGATTTTCCTGCTGCATCGCACTCTAGTTTT...ATGAGGAACAAGACTTTTTCTAAAAAGATAGTGGAAGTTCAAGGGATGTACCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGAACTGTGCTTACAAATaGCTGTGTGGTGTATGGAGG +
Preference number: 4 (lower is better)
Translates to: KFILCSESSLTIILSYNRNCAYK*LCGVWR
Trigger: CCTCCATACACCACACAGGCATTTGTAAGCACAGTT...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAACATATTCCTACAAGGTaGTTGTGGAAACTGTGCTTA +
Preference number: 4 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQHIPTR*LWKLCL
Trigger: TAAGCACAGTTTCCACAAGCACCTTGTAGGAATATG...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGTGCTCAGCAATTCATTaGATGGACACTGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGCSAIH*MDTGEW
Trigger: CCATTCTCCAGTGTCCATGCAATGAATTGCTGAGCA...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGTTTCAGATGTCCTCTTaGCTCGAAGGATATCTGGGA +
Preference number: 4 (lower is better)
Translates to: KFILCSESSLTIILSYNRFQMSS*LEGYLG
Trigger: TCCCAGATATCCTTCGAGCCAAGAGGACATCTGAAA...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CCA 90 bp TCTACCTTTCATCTGTTTATGGTCCTGGGTATATTTTACCGAGCTAATATTTTCTCATGCTTACCGGAGTaGCCTTGTAGTTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: STFHLFMVLGIFYRANIFSCLPE*PCSFAL
Trigger: AAGAGCAAAACTACAAGGCCACTCCGGTAAGCATGA...GAAAATATTAGCTCGGTAAAATATACCCAGGACCATAAACAGATGAAAGGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460652.1
CDS-3UTR CCA 90 bp AATCAGCTAACACCTTTAATATCTGAGGAGCATCCCACTTCCCTACCACAAAAACCTTTCATCTGTTTATaGTCCTGGGTATATTTTACC +
Preference number: 4 (lower is better)
Translates to: NQLTPLISEEHPTSLPQKPFICL*SWVYFT
Trigger: GGTAAAATATACCCAGGACCATAAACAGATGAAAGG...TTTTTGTGGTAGGGAAGTGGGATGCTCCTCAGATATTAAAGGTGTTAGCTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTCACTGTAATCGTACATaGCTCGGTAGGTCCTTAGAT +
Preference number: 4 (lower is better)
Translates to: LISLNITYKADIPKTRTSHCNRT*LGRSLD
Trigger: ATCTAAGGACCTACCGAGCCATGTACGATTACAGTG...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGCTGGACTGCAGACTCTaGATGAAATTTCAAGACCCA +
Preference number: 4 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGLDCRL*MKFQDP
Trigger: TGGGTCTTGAAATTTCATCCAGAGTCTGCAGTCCAG...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp GAGGTACATCCCTTGAACTTCCACTATCTTTTTAGAAAAAGTCTTGTTCCTCATTGGACAGAGAGGGGCTaGTCTAATCTTATCCATATT +
Preference number: 4 (lower is better)
Translates to: EVHPLNFHYLFRKSLVPHWTERG*SNLIHI
Trigger: AATATGGATAAGATTAGACCAGCCCCTCTCTGTCCA...ATGAGGAACAAGACTTTTTCTAAAAAGATAGTGGAAGTTCAAGGGATGTACCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAAAGGGTCCAAAAGGCATaGAATACTTCAGAGACTTTT +
Preference number: 4 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQERVQKA*NTSETF
Trigger: AAAAGTCTCTGAAGTATTCCATGCCTTTTGGACCCT...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp ATCAGACTTGGTCTACCTTTCATCTGTTTATGGTCCTGGGTATATTTTACCGAGGTTTTAAGAATGATCTaGTTGGACCCTACCATTGAA +
Preference number: 4 (lower is better)
Translates to: IRLGLPFICLWSWVYFTEVLRMI*LDPTIE
Trigger: TTCAATGGTAGGGTCCAACCAGATCATTCTTAAAAC...CTCGGTAAAATATACCCAGGACCATAAACAGATGAAAGGTAGACCAAGTCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
3UTR CAA 72 bp AAGATACCAGATCATCTCTGTATGGAATTGGTAACTTaGTTTGCTGAGTATTTTTCCAGTCACACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KIPDHLCMELVT*FAEYFSSHTPA
Trigger: AGCTGGAGTGTGACTGGAAAAATACTCAGCAAACAAAGTTACCAATTCCATACAGAGATGATCTGGTATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR TCA 90 bp GTGTATCTAAAATCAGACTTGGTCTACCTTTCATCTGTTTATGGTCCTGGGTATTATACTGGAGATTGCTaGTGTTCTTCTGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: VYLKSDLVYLSSVYGPGYYTGDC*CSSGFL
Trigger: AAGAAAACCAGAAGAACATCAGCAATCTCCAGTATA...ATACCCAGGACCATAAACAGATGAAAGGTAGACCAAGTCTGATTTTAGATACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460652.1
CDS-3UTR TCA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAATATGTTACAGAAGCTTaGATCTACATGACATGCAAC +
Preference number: 4 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQEYVTEA*IYMTCN
Trigger: GTTGCATGTCATGTAGATTCAAGCTTCTGTAACATA...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGGCCTTGAAGGGTTTGTaGGTGACTGTACTATACAAT +
Preference number: 4 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGALKGL*VTVLYN
Trigger: ATTGTATAGTACAGTCACTCACAAACCCTTCAAGGC...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTAAAACTAGAGTGCGATaGAGCAGGAAAATCTCAAGC +
Preference number: 4 (lower is better)
Translates to: LISLNITYKADIPKTRTSKTRVR*SRKISS
Trigger: GCTTGAGATTTTCCTGCTGCATCGCACTCTAGTTTT...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGCCTTCAAAACTAGAGTaGGATGCAGCAGGAAAATCT +
Preference number: 4 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGPSKLE*DAAGKS
Trigger: AGATTTTCCTGCTGCATCGCACTCTAGTTTTGAAGG...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp AATCAGACTTGGTCTACCTTTCATCTGTTTATGGTCCTGGGTATATTTTACCGACCAACCACATTTCCATaGTTTGTTAGTTATCGGATT +
Preference number: 4 (lower is better)
Translates to: NQTWSTFHLFMVLGIFYRPTTFP*FVSYRI
Trigger: AATCCGATAACTAACAAAGCATGGAAATGTGGTTGG...TCGGTAAAATATACCCAGGACCATAAACAGATGAAAGGTAGACCAAGTCTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR CCA 90 bp GAGGTACATCCCTTGAACTTCCACTATCTTTTTAGAAAAAGTCTTGTTCCTCATAACACTACCAAATTATaGCCTCAAGAGCATGCAACA +
Preference number: 4 (lower is better)
Translates to: EVHPLNFHYLFRKSLVPHNTTKL*PQEHAT
Trigger: TGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTT...ATGAGGAACAAGACTTTTTCTAAAAAGATAGTGGAAGTTCAAGGGATGTACCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTCATGCTCTCTGTGCTTaGACATTTACACAGTCATCT +
Preference number: 4 (lower is better)
Translates to: LISLNITYKADIPKTRTSHALCA*TFTQSS
Trigger: AGATGACTGTGTAAATGTCCAAGCACAGAGAGCATG...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAACCTTTCAGAAATAGATaGAAGAAGTCGGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQPFRNR*KKSAFS
Trigger: AGAAAATGCCGACTTCTTCCATCTATTTCTGAAAGG...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp ACCTTTCATCTGTTTATGGTCCTGGGTATATTTTACCGAGCTAATATTTTCTTGATTGCAGTTCCCCGTTaGAGTTCTCCCTTATATTTT +
Preference number: 4 (lower is better)
Translates to: TFHLFMVLGIFYRANIFLIAVPR*SSPLYF
Trigger: AAAATATAAGGGAGAACTTCAACGGGGAACTGCAAT...CAAGAAAATATTAGCTCGGTAAAATATACCCAGGACCATAAACAGATGAAAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR TCA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTACGAGGTACATCCCTTaGACTTCCACTATCTTTTTA +
Preference number: 4 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLITRYIP*TSTIFL
Trigger: TAAAAAGATAGTGGAAGTTCAAGGGATGTACCTCGT...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp GAGGTACATCCCTTGAACTTCCACTATCTTTTTAGAAAAAGTCTTGTTCCTCATGGGAGGAAAATATCTTaGCTGATTCACCAATGTAAA +
Preference number: 4 (lower is better)
Translates to: EVHPLNFHYLFRKSLVPHGRKIS*LIHQCK
Trigger: TTTACATTGGTGAATCAGTCAAGATATTTTCCTCCC...ATGAGGAACAAGACTTTTTCTAAAAAGATAGTGGAAGTTCAAGGGATGTACCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTATCAGTCACCCTTTTTaGTTCAATAATAGGAACGCG +
Preference number: 4 (lower is better)
Translates to: LISLNITYKADIPKTRTSISHPF*FNNRNA
Trigger: CGCGTTCCTATTATTGAAGCAAAAAGGGTGACTGAT...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp ATCCTGACAAGCTTTATTAACAACTGCCAACACTACCAAATTATGGCCTCAAGAAATGTGTCATTTCAATaGTGTTGTACATTATGCAGG +
Preference number: 4 (lower is better)
Translates to: ILTSFINNCQHYQIMASRNVSFQ*CCTLCR
Trigger: CCTGCATAATGTACAACAGCATTGAAATGACACATT...TCTTGAGGCCATAATTTGGTAGTGTTGGCAGTTGTTAATAAAGCTTGTCAGGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGCTGTCATTCCTGGTTTaGCGTCATTTAAGTAGTTTC +
Preference number: 4 (lower is better)
Translates to: KFILCSESSLTIILSYNRLSFLV*RHLSSF
Trigger: GAAACTACTTAAATGACGGCAAACCAGGAATGACAG...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp GTATCTAAAATCAGACTTGGTCTACCTTTCATCTGTTTATGGTCCTGGGTATATATCTGTTTATGGTCCTaGGTATATTTTACCGAGCTA +
Preference number: 4 (lower is better)
Translates to: VSKIRLGLPFICLWSWVYICLWS*VYFTEL
Trigger: TAGCTCGGTAAAATATACCCAGGACCATAAACAGAT...ATATACCCAGGACCATAAACAGATGAAAGGTAGACCAAGTCTGATTTTAGATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR CCA 90 bp GGTCTACCTTTCATCTGTTTATGGTCCTGGGTATATTTTACCGAGCTAATATTTCCTTTCATCTGTTTATaGTCCTGGGTATATTTTACC +
Preference number: 4 (lower is better)
Translates to: GLPFICLWSWVYFTELIFPFICL*SWVYFT
Trigger: GGTAAAATATACCCAGGACCATAAACAGATGAAAGG...AAATATTAGCTCGGTAAAATATACCCAGGACCATAAACAGATGAAAGGTAGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR CCA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTTTGATTAACCCGTTTTaGTGGCTAGATTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLILINPF*WLDFHS
Trigger: GGAATGGAAATCTAGCCACCAAAACGGGTTAATCAA...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CCA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAAATAAATATTTCAAACTaGGCTACACTGCAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQEINISN*ATLQVC
Trigger: ACACACTTGCAGTGTAGCCCAGTTTGAAATATTTAT...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAAATAAATATTTCAAACTaGGCTACACTGCAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQINISN*ATLQVC
Trigger: ACACACTTGCAGTGTAGCCCAGTTTGAAATATTTAT...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGTATACTGGAGATTGCTaGTGTTCTTCTGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KFILCSESSLTIILSYNRYTGDC*CSSGFL
Trigger: AAGAAAACCAGAAGAACATCAGCAATCTCCAGTATA...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR TCA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGAAAGCAAAACGGGTTTaGAATTATTGGCTGCATTAC +
Preference number: 4 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGKAKRV*NYWLHY
Trigger: GTAATGCAGCCAATAATTTCAAACCCGTTTTGCTTT...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR TCA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGTATGTTACAGAAGCTTaGATCTACATGACATGCAAC +
Preference number: 4 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGYVTEA*IYMTCN
Trigger: GTTGCATGTCATGTAGATTCAAGCTTCTGTAACATA...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR TCA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGTCAACTTTATGTCAGTaGCATATAGATGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGSTLCQ*HIDAAS
Trigger: TGAAGCTGCATCTATATGTCACTGACATAAAGTTGA...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR TCA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGTTTTTGATCAACAGTTaGCAGTTAGTTGCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGFLINS*QLVARK
Trigger: TTTCCTCGCAACTAACTGTCAACTGTTGATCAAAAA...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGTTTTTGATCAACAGTTaGCAGTTAGTTGCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KFILCSESSLTIILSYNRFLINS*QLVARK
Trigger: TTTCCTCGCAACTAACTGTCAACTGTTGATCAAAAA...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR TCA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTGGGAGGAAAATATCTTaGCTGATTCACCAATGTAAA +
Preference number: 4 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLIGRKIS*LIHQCK
Trigger: TTTACATTGGTGAATCAGTCAAGATATTTTCCTCCC...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp CTAAAATCAGACTTGGTCTACCTTTCATCTGTTTATGGTCCTGGGTATATTTTACCAACCACATTTCCATaGTTTGTTAGTTATCGGATT +
Preference number: 4 (lower is better)
Translates to: LKSDLVYLSSVYGPGYILPTTFP*FVSYRI
Trigger: AATCCGATAACTAACAAAGCATGGAAATGTGGTTGG...TAAAATATACCCAGGACCATAAACAGATGAAAGGTAGACCAAGTCTGATTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR CCA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGATCTGTTTATGGTCCTaGGTATATTTTACCGAGCTA +
Preference number: 4 (lower is better)
Translates to: KFILCSESSLTIILSYNRICLWS*VYFTEL
Trigger: TAGCTCGGTAAAATATACCCAGGACCATAAACAGAT...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CCA 90 bp ACCTTTCATCTGTTTATGGTCCTGGGTATATTTTACCGAGCTAATATTTTCTTGATCTGTTTATGGTCCTaGGTATATTTTACCGAGCTA +
Preference number: 4 (lower is better)
Translates to: TFHLFMVLGIFYRANIFLICLWS*VYFTEL
Trigger: TAGCTCGGTAAAATATACCCAGGACCATAAACAGAT...CAAGAAAATATTAGCTCGGTAAAATATACCCAGGACCATAAACAGATGAAAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
3UTR CAA 72 bp TCAAACTTTAGAAAGTCAGGTGCATGCTCTCTGTGCTaGGACATTTACACAGTCATCTTTAACTCAATTTTT +
Preference number: 4 (lower is better)
Translates to: SNFRKSGACSLC*DIYTVIFNSIF
Trigger: AAAAATTGAGTTAAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAAGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR GCA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTTCAGTGACATATAGATaGAGCTTCAGTGTAATAAAG +
Preference number: 4 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLISVTYR*SFSVIK
Trigger: CTTTATTACACTGAAGCTGCATCTATATGTCACTGA...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR GCA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGAATGTGTCATTTCAATaGTGTTGTACATTATGCAGG +
Preference number: 4 (lower is better)
Translates to: KFILCSESSLTIILSYNRNVSFQ*CCTLCR
Trigger: CCTGCATAATGTACAACAGCATTGAAATGACACATT...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS TCA 90 bp GGCTCCGCGCCGCTGGCTCTGCGTCGCTCGCACTCCAGGTACGGGTaGCTCACACAGTCACTCGCGCCCGCCCCTCGCGCTCACTCGCTC +
Preference number: 5 (lower is better)
Translates to: GSAPLALRRSHSRYG*LTQSLAPAPRAHSL
Trigger: GAGCGAGTGAGCGCGAGGGGCGGGCGCGAGTGACTGTGTGAGTCACCCGTACCTGGAGTGCGAGCGACGCAGAGCCAGCGGCGCGGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS-3UTR CAA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGACGGGTGCCGCTGGCTaGGTGACCTGGACTGCAGAC +
Preference number: 5 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLTGAAG*VTWTAD
Trigger: GTCTGCAGTCCAGGTCACCAAGCCAGCGGCACCCGT...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS CCA 90 bp TCCCTTTGGTTATACCTTCTGGTCCCAGAGACAGCCTTGGGGACTTaGCCCAGTTGCCTGGATCTGGTTCAGGAGCTGCCTGGATGGGCG +
Preference number: 5 (lower is better)
Translates to: SLWLYLLVPETALGT*PSCLDLVQELPGWA
Trigger: CGCCCATCCAGGCAGCTCCTGAACCAGATCCAGGCAACTGGGCCAAGTCCCCAAGGCTGTCTCTGGGACCAGAAGGTATAACCAAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529198.1
ENST00000534331.7
ENST00000649437.1
CDS CCA 90 bp GGCCTCAGGCCCTTCTCGGCTCTCCGTTCTGCCTTACCAGGCCTATaGGATAAAGTGCAGCTGTCCGTTCTTCAAGCCTGTTCATGTCTG +
Preference number: 5 (lower is better)
Translates to: GLRPFSALRSALPGL*DKVQLSVLQACSCL
Trigger: CAGACATGAACAGGCTTGAAGAACGGACAGCTGCACTTTATCCCATAGGCCTGGTAAGGCAGAACGGAGAGCCGAGAAGGGCCTGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529198.1
CDS-3UTR CAA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGCCTTGGGAATGGCTTaGCTGATAGGCTCCGGGAAG +
Preference number: 5 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAAALGMA*LIGSGK
Trigger: CTTCCCGGAGCCTATCAGCAAAGCCATTCCCAAGGC...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS TCA 90 bp CCATCTCCACGATGTGAGGGTGGACCCCTTTATAGGCAGCATCGCTaGCCACCTGGGTGTTCTTCCTCACTCTCTCTGTCACAGGATCGT +
Preference number: 5 (lower is better)
Translates to: PSPRCEGGPLYRQHR*PPGCSSSLSLSQDR
Trigger: ACGATCCTGTGACAGAGAGAGTGAGGAAGAACACCCAGGTGGTCAGCGATGCTGCCTATAAAGGGGTCCACCCTCACATCGTGGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000493005.5
ENST00000675114.1
ENST00000675700.1
ENST00000675702.1
ENST00000676125.1
CDS GCA 90 bp CGGAGATTTCTGACCTGTCGTCTCCGAGACCTGTACCGAAAGTACTaGTGGAATGGGATCGAGACCAGTGTCGCCTATAGTGACTCGCCT +
Preference number: 5 (lower is better)
Translates to: RRFLTCRLRDLYRKY*WNGIETSVAYSDSP
Trigger: AGGCGAGTCACTATAGGCGACACTGGTCTCGATCCCATTCCAGCAGTACTTTCGGTACAGGTCTCGGAGACGACAGGTCAGAAATCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGCTGGTGGATCAGAAATaGCAGTTCCCCGTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLLVDQK*QFPVEV
Trigger: AACTTCAACGGGGAACTGCAATTTCTGATCCACCAG...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS CCA 90 bp ACACAGGGGAGGTTATTTCCTTCATTCACAGGCCTGAAGCAGAAGTaGATGGACCAGGGATGGGGTAGAAAGGTGAGCCTGTCTCCTAGC +
Preference number: 5 (lower is better)
Translates to: TQGRLFPSFTGLKQK*MDQGWGRKVSLSPS
Trigger: GCTAGGAGACAGGCTCACCTTTCTACCCCATCCCTGGTCCATCCACTTCTGCTTCAGGCCTGTGAATGAAGGAAATAACCTCCCCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675114.1
CDS-3UTR CAA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAAGTGAATGCCACCCCGTaGCAGGTCACAGTAAACGGC +
Preference number: 5 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKVNATP*QVTVNG
Trigger: GCCGTTTACTGTGACCTGCAACGGGGTGGCATTCAC...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CAA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGCAGCAACTTGCTTGCTaGGTTTTCTTTCCAAGAGCA +
Preference number: 5 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLQQLAC*VFFPRA
Trigger: TGCTCTTGGAAAGAAAACCAAGCAAGCAAGTTGCTG...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGACTCTGCAATTCACTTaGCTGCTTCAGGCGAAGATT +
Preference number: 5 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLTLQFT*LLQAKI
Trigger: AATCTTCGCCTGAAGCAGCAAAGTGAATTGCAGAGT...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS-3UTR CAA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTCATGTAGCCATAGCCTaGGGAATGGCTTTGCTGATA +
Preference number: 5 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAAHVAIA*GMALLI
Trigger: TATCAGCAAAGCCATTCCCAAGGCTATGGCTACATG...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS GCA 90 bp TCAGCTGCTCCTGGTTTCGCCTCACTCTCTCTATCTCCGGGGTCATaGTTACCGGAGTGGCCTTGTAGTTTTGCTCTTTATACTGGAGAT +
Preference number: 5 (lower is better)
Translates to: SAAPGFASLSLSPGS*LPEWPCSFALYTGD
Trigger: ATCTCCAGTATAAAGAGCAAAACTACAAGGCCACTCCGGTAAGCATGACCCCGGAGATAGAGAGAGTGAGGCGAAACCAGGAGCAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377122.9
ENST00000460652.1
ENST00000493005.5
ENST00000675747.1
CDS GCA 90 bp CCTTCTCGGCTCTCCGTTCTGCCTTACCAGGCCTATGGGATAAAGTaGAGCTGTCCGTTCTTCAAGCCTGTTCATGTCTGGAATGTACAT +
Preference number: 5 (lower is better)
Translates to: PSRLSVLPYQAYGIK*SCPFFKPVHVWNVH
Trigger: ATGTACATTCCAGACATGAACAGGCTTGAAGAACGGACAGCTGCACTTTATCCCATAGGCCTGGTAAGGCAGAACGGAGAGCCGAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529198.1
CDS CCA 90 bp AGATTTCTGACCTGTCGTCTCCGAGACCTGTACCGAAAGTACTGCTaGAATGGGATCGAGACCAGTGTCGCCTATAGTGACTCGCCTTTT +
Preference number: 5 (lower is better)
Translates to: RFLTCRLRDLYRKYC*NGIETSVAYSDSPF
Trigger: AAAAGGCGAGTCACTATAGGCGACACTGGTCTCGATCCCATTCCAGCAGTACTTTCGGTACAGGTCTCGGAGACGACAGGTCAGAAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGAAGTGAAGTTCATCTaGTGTAGTGAATCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAAEVKFI*CSESSL
Trigger: GAGGCTGGATTCACTACACAAGATGAACTTCACTTC...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS TCA 90 bp CATGGCATGTTTAACCTCAGGGGGCTCCTTCATGTGGGCATAATCTaGGAATCCTTTGGCAGCATCATGTTTCTGCTTGTAGGCCACCTC +
Preference number: 5 (lower is better)
Translates to: HGMFNLRGLLHVGII*ESFGSIMFLLVGHL
Trigger: GAGGTGGCCTACAAGCAGAAACATGATGCTGCCAAAGGATTCTCAGATTATGCCCACATGAAGGAGCCCCCTGAGGTTAAACATGCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377119.5
ENST00000377122.9
ENST00000674540.1
ENST00000675747.1
CDS TCA 90 bp TTTATGGGTGCTTGGGGCCCTTTCCCTTCTCCTTACGCCTGCCTTTaGTCTTTAACCAGTCATTTATGGCTCTCTGGAAGGGAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: FMGAWGPFPSPYACL*SLTSHLWLSGREAG
Trigger: TCCTGCTTCCCTTCCAGAGAGCCATAAATGACTGGTTAAAGATCAAAGGCAGGCGTAAGGAGAAGGGAAAGGGCCCCAAGCACCCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485750.1
CDS TCA 90 bp GTTATCACTGGGGTTAAATTCCTGGCCCTGCCCTGTAAAGAATCCTaGATCCTGATGTGGTCCATAAAGCCTGATGGAAACAGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: VITGVKFLALPCKES*ILMWSIKPDGNRLP
Trigger: GGGCAGCCTGTTTCCATCAGGCTTTATGGACCACATCAGGATTCAGGATTCTTTACAGGGCAGGGCCAGGAATTTAACCCCAGTGATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485750.1
CDS GCA 90 bp ACCAGAGGGCAGGGTTTACCAGATGAAATTGGCATAGTCTATGCGTaGACTGAGTACTGCTTGCACCCCACAGCAACACAAACACTTCCA +
Preference number: 5 (lower is better)
Translates to: TRGQGLPDEIGIVYA*TEYCLHPTATQTLP
Trigger: TGGAAGTGTTTGTGTTGCTGTGGGGTGCAAGCAGTACTCAGTGCACGCATAGACTATGCCAATTTCATCTGGTAAACCCTGCCCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675747.1
CDS CCA 90 bp TGCATTGCTTATGATCTTAGAGATCTGGGTTGCCATCTTGATGTCTaGTCGGTCAAGTTCTGCACTGTACGTGTGGGTGTCCTGCACGTC +
Preference number: 5 (lower is better)
Translates to: CIAYDLRDLGCHLDV*SVKFCTVRVGVLHV
Trigger: GACGTGCAGGACACCCACACGTACAGTGCAGAACTTGACCGACCAGACATCAAGATGGCAACCCAGATCTCTAAGATCATAAGCAATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377119.5
ENST00000377122.9
ENST00000674540.1
ENST00000675747.1
CDS CCA 90 bp AAATATAAAAGGAAACAGAAACGACTTGCCGCACTCAGCTGCTCCTaGTTTCGCCTCACTCTCTCTATCTCCGGGGTCATGCTTACCGGA +
Preference number: 5 (lower is better)
Translates to: KYKRKQKRLAALSCS*FRLTLSISGVMLTG
Trigger: TCCGGTAAGCATGACCCCGGAGATAGAGAGAGTGAGGCGAAACCAGGAGCAGCTGAGTGCGGCAAGTCGTTTCTGTTTCCTTTTATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493005.5
ENST00000675747.1
CDS CCA 90 bp TCTGCCAGCGTCTTGATCTTGGACTTCCCAACGTCAAGAAATTCTTaGCTCTTTTTCCACCCACGCAGGGAAACCAGGAGGAATTCCAGA +
Preference number: 5 (lower is better)
Translates to: SASVLILDFPTSRNS*LFFHPRRETRRNSR
Trigger: TCTGGAATTCCTCCTGGTTTCCCTGCGTGGGTGGAAAAAGAGCCAAGAATTTCTTGACGTTGGGAAGTCCAAGATCAAGACGCTGGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675702.1
CDS-3UTR CAA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCGCCTTGGGAATGGCTTaGCTGATAGGCTCCGGGAAG +
Preference number: 5 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTALGMA*LIGSGK
Trigger: CTTCCCGGAGCCTATCAGCAAAGCCATTCCCAAGGC...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTACAGAGTTAAGAGAATaGGCTTGGGGTGATTCCAAA +
Preference number: 5 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAATELRE*AWGDSK
Trigger: TTTGGAATCACCCCAAGCCAATTCTCTTAACTCTGT...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CAA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGGGAAATAAATTAGCTTaGGCCTTTGGACTAGTAAAC +
Preference number: 5 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLGNKLA*AFGLVN
Trigger: GTTTACTAGTCCAAAGGCCAAAGCTAATTTATTTCC...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CAA 90 bp GCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTGGCTTGGTGACCTGGTGAAGCCCCTTCATTaGCAAAACATTCAATGTTTT +
Preference number: 5 (lower is better)
Translates to: AQSEKHRVADGCRWLGDLVKPLH*QNIQCF
Trigger: AAAACATTGAATGTTTTGCAAATGAAGGGGCTTCAC...CAGGTCACCAAGCCAGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp GGTCACAGTAAACGGCACAATCAGAAAAACACAGGGTTGCCGACGGGTGCCGCTCTGAAGAGAGTGCATTaGAGAACGCAGTTCTATCAT +
Preference number: 5 (lower is better)
Translates to: GHSKRHNQKNTGLPTGAALKRVH*RTQFYH
Trigger: ATGATAGAACTGCGTTCTCAAATGCACTCTCTTCAG...AGCGGCACCCGTCGGCAACCCTGTGTTTTTCTGATTGTGCCGTTTACTGTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS GCA 90 bp GGTTTACCAGATGAAATTGGCATAGTCTATGCGTGCACTGAGTACTaGTTGCACCCCACAGCAACACAAACACTTCCAAGTCATCCAGCC +
Preference number: 5 (lower is better)
Translates to: GLPDEIGIVYACTEY*LHPTATQTLPSHPA
Trigger: GGCTGGATGACTTGGAAGTGTTTGTGTTGCTGTGGGGTGCAAGCAGTACTCAGTGCACGCATAGACTATGCCAATTTCATCTGGTAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675747.1
CDS CCA 90 bp TGGCTCGGTAGGTCCTTAGATTTGGTGAATGCTGCATTGATCTCATaGATGACACACTGGTCTGGTGCATGTAGCCATAGCCTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: WLGRSLDLVNAALIS*MTHWSGACSHSLGN
Trigger: ATTCCCAAGGCTATGGCTACATGCACCAGACCAGTGTGTCATCCATGAGATCAATGCAGCATTCACCAAATCTAAGGACCTACCGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000675114.1
ENST00000675700.1
ENST00000675702.1
ENST00000676125.1
CDS-3UTR CAA 90 bp TTCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGCTTTGGAGGACGGCATaGCCTTTATGGTGCAGATGT +
Preference number: 5 (lower is better)
Translates to: FFSCQLHARDTCCQTKGGLWRTA*PLWCRC
Trigger: ACATCTGCACCATAAAGGCAATGCCGTCCTCCAAAG...CCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp TTCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGCTCATTCCCAGAGTGTaGTCAAGCTCAGCATGGAGA +
Preference number: 5 (lower is better)
Translates to: FFSCQLHARDTCCQTKGGLIPRV*SSSAWR
Trigger: TCTCCATGCTGAGCTTGACAACACTCTGGGAATGAG...CCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS TCA 90 bp TTTTCTTTCTTTATTCCCTCTCGCCACAGTGAAGAAGCTGAAAAATaGGGAGCTCACTCGCAAACTCTGCTCCATTGTCAGCTGTGCGGG +
Preference number: 5 (lower is better)
Translates to: FSFFIPSRHSEEAEK*GAHSQTLLHCQLCG
Trigger: CCCGCACAGCTGACAATGGAGCAGAGTTTGCGAGTGAGCTCCTCATTTTTCAGCTTCTTCACTGTGGCGAGAGGGAATAAAGAAAGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675114.1
CDS CCA 90 bp CGGTGTAGGAGGATCGAAGACATCAGAAAGTTTGGGGAATATCTGTaGACTTCCCCTCTCCAAGAAAGTCCTGAATTCTGTTCAATGCCC +
Preference number: 5 (lower is better)
Translates to: RCRRIEDIRKFGEYL*TSPLQESPEFCSMP
Trigger: GGGCATTGAACAGAATTCAGGACTTTCTTGGAGAGGGGAAGTCCACAGATATTCCCCAAACTTTCTGATGTCTTCGATCCTCCTACACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485750.1
CDS-3UTR CAA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCACGGCCGCTGAGCATTTaGCTGGCTTTCAAAACATGG +
Preference number: 5 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSRPLSI*LAFKTW
Trigger: CCATGTTTTGAAAGCCAGCAAAATGCTCAGCGGCCG...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp AGATCTGCATCTTCTTCAAGAAATAAACCCAGTGGACAGAGAGGGGCTGGTCTACTTCATCAGACGGTCTaGTTACCTCACTGCAGCATG +
Preference number: 5 (lower is better)
Translates to: RSASSSRNKPSGQRGAGLLHQTV*LPHCSM
Trigger: CATGCTGCAGTGAGGTAACAAGACCGTCTGATGAAG...TAGACCAGCCCCTCTCTGTCCACTGGGTTTATTTCTTGAAGAAGATGCAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAAGGAAAAGGACGTCTTTaGATTAACCCGTTTTGGTGG +
Preference number: 5 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKGKGRL*INPFWW
Trigger: CCACCAAAACGGGTTAATCAAAAGACGTCCTTTTCC...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CAA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTACGGGTGCCGCTGGCTaGGTGACCTGGACTGCAGAC +
Preference number: 5 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLITGAAG*VTWTAD
Trigger: GTCTGCAGTCCAGGTCACCAAGCCAGCGGCACCCGT...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CAA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTACGGGTGCCGCTGGCTaGGTGACCTGGACTGCAGAC +
Preference number: 5 (lower is better)
Translates to: LISLNITYKADIPKTRTSTGAAG*VTWTAD
Trigger: GTCTGCAGTCCAGGTCACCAAGCCAGCGGCACCCGT...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CAA 90 bp TCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGAGCATGCTCTCTGTGCTaGGACATTTACACAGTCATC +
Preference number: 5 (lower is better)
Translates to: SLAVSFMHEIPVAKPKVGACSLC*DIYTVI
Trigger: GATGACTGTGTAAATGTCCAAGCACAGAGAGCATGC...TCCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS TCA 90 bp GAAAAGATGGCCATCCATGAACCAGGAAGGAATCTGCCAGCGTCTTaGTCTTGGACTTCCCAACGTCAAGAAATTCTTGGCTCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: EKMAIHEPGRNLPAS*SWTSQRQEILGSFS
Trigger: GGAAAAAGAGCCAAGAATTTCTTGACGTTGGGAAGTCCAAGATCAAGACGCTGGCAGATTCCTTCCTGGTTCATGGATGGCCATCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675702.1
CDS GCA 90 bp TTTCTGCTTGTAGGCCACCTCACTCTGGAGCTGTGTAACTTCTCCTaGAAAAACACTGTCAATTGTGGCTGGCATCCGCTTATAAAGAGA +
Preference number: 5 (lower is better)
Translates to: FLLVGHLTLELCNFS*KNTVNCGWHPLIKR
Trigger: TCTCTTTATAAGCGGATGCCAGCCACAATTGACAGTGTTTTTGCAGGAGAAGTTACACAGCTCCAGAGTGAGGTGGCCTACAAGCAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377119.5
ENST00000377122.9
ENST00000434381.1
ENST00000674540.1
ENST00000675747.1
CDS CCA 90 bp TCCTTAGATTTGGTGAATGCTGCATTGATCTCATGGATGACACACTaGTCTGGTGCATGTAGCCATAGCCTTGGGAATGGCTTTGCTGAT +
Preference number: 5 (lower is better)
Translates to: SLDLVNAALISWMTH*SGACSHSLGNGFAD
Trigger: ATCAGCAAAGCCATTCCCAAGGCTATGGCTACATGCACCAGACCAGTGTGTCATCCATGAGATCAATGCAGCATTCACCAAATCTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000675114.1
ENST00000675700.1
ENST00000675702.1
ENST00000676125.1
CDS-3UTR CAA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTATGCACGAGATACCTGTaGCCAAACCAAAGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLCTRYL*PNQRWE
Trigger: CTCCCACCTTTGGTTTGGCAACAGGTATCTCGTGCA...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp TTCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGATGCCTGTAATAGACTaGGTGCTGCTTCCTAAATGC +
Preference number: 5 (lower is better)
Translates to: FFSCQLHARDTCCQTKGGMPVID*VLLPKC
Trigger: GCATTTAGGAAGCAGCACCAAGTCTATTACAGGCAT...CCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS TCA 90 bp ATCATGCTATTGAATAAACAGGCACCTACATTACTGATTTGCTCCTaGGTCCTCTTCAGTCTCTGTAGCTCAGGAGTGTCCGTGACGATG +
Preference number: 5 (lower is better)
Translates to: IMLLNKQAPTLLICS*VLFSLCSSGVSVTM
Trigger: CATCGTCACGGACACTCCTGAGCTACAGAGACTGAAGAGGACTCAGGAGCAAATCAGTAATGTAGGTGCCTGTTTATTCAATAGCATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675747.1
CDS CCA 90 bp AGAATGGTTCACTTTCCTTTAACCAAAGAACAATTATCCCGTTTATaGGTGCTTGGGGCCCTTTCCCTTCTCCTTACGCCTGCCTTTGAT +
Preference number: 5 (lower is better)
Translates to: RMVHFPLTKEQLSRL*VLGALSLLLTPAFD
Trigger: ATCAAAGGCAGGCGTAAGGAGAAGGGAAAGGGCCCCAAGCACCCATAAACGGGATAATTGTTCTTTGGTTAAAGGAAAGTGAACCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485750.1
CDS-3UTR CAA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTAATCTGGGTTGCCATCTaGATGTCTGGTCGGTCAAGT +
Preference number: 5 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLIWVAI*MSGRSS
Trigger: ACTTGACCGACCAGACATCAAGATGGCAACCCAGAT...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp AGATCTGCATCTTCTTCAAGAAATAAACCCAGTGGACAGAGAGGGGCTGGTCTAGACTCCAGGTCTTTCTaGTATTCTTTCTCACTTGCC +
Preference number: 5 (lower is better)
Translates to: RSASSSRNKPSGQRGAGLDSRSF*YSFSLA
Trigger: GGCAAGTGAGAAAGAATACAAGAAAGACCTGGAGTC...TAGACCAGCCCCTCTCTGTCCACTGGGTTTATTTCTTGAAGAAGATGCAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCATTTCAGATGTCCTCTaGGCTCGAAGGATATCTGGG +
Preference number: 5 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTISDVL*ARRISG
Trigger: CCCAGATATCCTTCGAGCCAAGAGGACATCTGAAAT...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp AATCAGCTAACACCTTTAATATCTGAGGAGCATCCCACTTCCCTACCACAAAAATGCACGAGATACCTGTaGCCAAACCAAAGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: NQLTPLISEEHPTSLPQKCTRYL*PNQRWE
Trigger: CTCCCACCTTTGGTTTGGCAACAGGTATCTCGTGCA...TTTTTGTGGTAGGGAAGTGGGATGCTCCTCAGATATTAAAGGTGTTAGCTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTGCATGCTCTCTGTGCTaGGACATTTACACAGTCATC +
Preference number: 5 (lower is better)
Translates to: LTVSCEERVQKAWNTSETACSLC*DIYTVI
Trigger: GATGACTGTGTAAATGTCCAAGCACAGAGAGCATGC...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCAATATTTCACCTGACTTaGGAGGACGGCATTGCCTTT +
Preference number: 5 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSIFHLT*EDGIAF
Trigger: AAAGGCAATGCCGTCCTCCAAAGTCAGGTGAAATAT...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp CAGCACACACCTCTGATGCGATTTGATGTGAGTTGTCATGTTAAATCTCAGACCTGTATTCTTTCTCACTaGCCATTTCAGAGGCTCGCT +
Preference number: 5 (lower is better)
Translates to: QHTPLMRFDVSCHVKSQTCILSH*PFQRLA
Trigger: AGCGAGCCTCTGAAATGGCAAGTGAGAAAGAATACA...GGTCTGAGATTTAACATGACAACTCACATCAAATCGCATCAGAGGTGTGTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp TCAGACTTGGTCTACCTTTCATCTGTTTATGGTCCTGGGTATATTTTACCGAGCCTGGTGGATCAGAAATaGCAGTTCCCCGTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: SDLVYLSSVYGPGYILPSLVDQK*QFPVEV
Trigger: AACTTCAACGGGGAACTGCAATTTCTGATCCACCAG...GCTCGGTAAAATATACCCAGGACCATAAACAGATGAAAGGTAGACCAAGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR CAA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGGCCTTGGGAATGGCTTaGCTGATAGGCTCCGGGAAG +
Preference number: 5 (lower is better)
Translates to: KFILCSESSLTIILSYNRALGMA*LIGSGK
Trigger: CTTCCCGGAGCCTATCAGCAAAGCCATTCCCAAGGC...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp GAAAATGCTGCTGTTTTCAGCCCAGAGGTCATTCCTTCTTCCTGGTACCTGTGTCATCTCTGTATGGAATaGGTAACTTTGTTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: ENAAVFSPEVIPSSWYLCHLCME*VTLFAE
Trigger: CTCAGCAAACAAAGTTACCAATTCCATACAGAGATG...ACACAGGTACCAGGAAGAAGGAATGACCTCTGGGCTGAAAACAGCAGCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CAA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTGTGAATGCCACCCCGTaGCAGGTCACAGTAAACGGC +
Preference number: 5 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLIVNATP*QVTVNG
Trigger: GCCGTTTACTGTGACCTGCAACGGGGTGGCATTCAC...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CAA 90 bp ACCCTAAGTGAATGCCACCCCGTTGCAGGTCACAGTAAACGGCACAATCAGAAATCAGTGAATCTGGTTTaGAAATCGGTGGATGAAATT +
Preference number: 5 (lower is better)
Translates to: TLSECHPVAGHSKRHNQKSVNLV*KSVDEI
Trigger: AATTTCATCCACCGATTTCAAAACCAGATTCACTGA...TTTCTGATTGTGCCGTTTACTGTGACCTGCAACGGGGTGGCATTCACTTAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp TTCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGAACGAGGTACATCCCTaGAACTTCCACTATCTTTTT +
Preference number: 5 (lower is better)
Translates to: FFSCQLHARDTCCQTKGGNEVHP*NFHYLF
Trigger: AAAAAGATAGTGGAAGTTCAAGGGATGTACCTCGTT...CCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp AGATCTGCATCTTCTTCAAGAAATAAACCCAGTGGACAGAGAGGGGCTGGTCTAAGAATAGGCAGCAACTaGCTTGCTTGGTTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: RSASSSRNKPSGQRGAGLRIGSN*LAWFSF
Trigger: GAAAGAAAACCAAGCAAGCAAGTTGCTGCCTATTCT...TAGACCAGCCCCTCTCTGTCCACTGGGTTTATTTCTTGAAGAAGATGCAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp TCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGAGTCATTTCAATGCTGTaGTACATTATGCAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: SLAVSFMHEIPVAKPKVGVISML*YIMQGK
Trigger: TTTCCCCTGCATAATGTACAACAGCATTGAAATGAC...TCCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTATTAGGGTGCATTGCTaGCATCTAACAACCCATGCT +
Preference number: 5 (lower is better)
Translates to: LTVSCEERVQKAWNTSETIRVHC*HLTTHA
Trigger: AGCATGGGTTGTTAGATGCAAGCAATGCACCCTAAT...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS GCA 90 bp CTGCTGATTTTTCTTCACTCGTTCGATCTCTGGGCTATCTTTCACTaGAGTGCCAGCTCCCACTTCTTTCTTATAAAATACCGCACTAAT +
Preference number: 5 (lower is better)
Translates to: LLIFLHSFDLWAIFH*SASSHFFLIKYRTN
Trigger: ATTAGTGCGGTATTTTATAAGAAAGAAGTGGGAGCTGGCACTGCAGTGAAAGATAGCCCAGAGATCGAACGAGTGAAGAAAAATCAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000493005.5
ENST00000675747.1
CDS CCA 90 bp ATCTTCATTCATGACCAACCTGGCTATAGATTTCAGATGTCCTCTTaGCTCGAAGGATATCTGGGATATCCATGCTCACTTGCATTCCTT +
Preference number: 5 (lower is better)
Translates to: IFIHDQPGYRFQMSS*LEGYLGYPCSLAFL
Trigger: AAGGAATGCAAGTGAGCATGGATATCCCAGATATCCTTCGAGCCAAGAGGACATCTGAAATCTATAGCCAGGTTGGTCATGAATGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498424.2
CDS-3UTR CAA 90 bp TTCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGGCTTTAATGGTGCCTTaGTATTTTGCCTCAGAAATA +
Preference number: 5 (lower is better)
Translates to: FFSCQLHARDTCCQTKGGALMVP*YFASEI
Trigger: TATTTCTGAGGCAAAATACAAAGGCACCATTAAAGC...CCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCATCTTTTGAGCCTCCTTaGAAGCTTGATATGATGGTG +
Preference number: 5 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSSFEPP*KLDMMV
Trigger: CACCATCATATCAAGCTTCAAAGGAGGCTCAAAAGA...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAAATCTCTGCAGCCTTCTaGGCATGCTGCATTTCAAGG +
Preference number: 5 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQEISAAF*ACCISR
Trigger: CCTTGAAATGCAGCATGCCAAGAAGGCTGCAGAGAT...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGCATGTAGCCATAGCCTaGGGAATGGCTTTGCTGATA +
Preference number: 5 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQHVAIA*GMALLI
Trigger: TATCAGCAAAGCCATTCCCAAGGCTATGGCTACATG...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTATTGGTGAATGCTGCATaGATCTCATGGATGACACAC +
Preference number: 5 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLLVNAA*ISWMTH
Trigger: GTGTGTCATCCATGAGATCAATGCAGCATTCACCAA...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CAA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTAGGTAGGTCCTTAGATTaGGTGAATGCTGCATTGATC +
Preference number: 5 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLGRSLD*VNAALI
Trigger: GATCAATGCAGCATTCACCAAATCTAAGGACCTACC...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CAA 90 bp TTCTTTAGCTGTCAGCTTCATGCACGAGATACCTGTTGCCAAACCAAAGGTGGGATTATAATTTGCCCTTaGCAGAGTAGCTGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: FFSCQLHARDTCCQTKGGIIICP*QSSCEV
Trigger: AACTTCACAGCTACTCTGCAAAGGGCAAATTATAAT...CCCACCTTTGGTTTGGCAACAGGTATCTCGTGCATGAAGCTGACAGCTAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCAGTGCTTCTGTCAGGCTaGAGAACACATCAAACTTTA +
Preference number: 5 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSVLLSG*RTHQTL
Trigger: TAAAGTTTGATGTGTTCTCAAGCCTGACAGAAGCAC...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp ATCCTGACAAGCTTTATTAACAACTGCCAACACTACCAAATTATGGCCTCAAGACTCATTCCCAGAGTGTaGTCAAGCTCAGCATGGAGA +
Preference number: 5 (lower is better)
Translates to: ILTSFINNCQHYQIMASRLIPRV*SSSAWR
Trigger: TCTCCATGCTGAGCTTGACAACACTCTGGGAATGAG...TCTTGAGGCCATAATTTGGTAGTGTTGGCAGTTGTTAATAAAGCTTGTCAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTAGAAGTGAAGTTCATCTaGTGTAGTGAATCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLEVKFI*CSESSL
Trigger: GAGGCTGGATTCACTACACAAGATGAACTTCACTTC...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp GTTAGTTATCGGATTAATAGTGAAGTAATGCCATCCGTGCACTGGATCCGCCCAGGTTGGACCCTACCATaGAAATATGATTTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: VSYRINSEVMPSVHWIRPGWTLP*KYDFVL
Trigger: AAGCACAAAATCATATTTCAATGGTAGGGTCCAACC...TGGGCGGATCCAGTGCACGGATGGCATTACTTCACTATTAATCCGATAACTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460652.1
ENST00000473616.5
ENST00000481592.5
CDS-3UTR CAA 90 bp AGTTATCGGATTAATAGTGAAGTAATGCCATCCGTGCACTGGATCCGCCCATTCGGTTGGACCCTACCATaGAAATATGATTTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: SYRINSEVMPSVHWIRPFGWTLP*KYDFVL
Trigger: AAGCACAAAATCATATTTCAATGGTAGGGTCCAACC...GAATGGGCGGATCCAGTGCACGGATGGCATTACTTCACTATTAATCCGATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460652.1
ENST00000473616.5
ENST00000481592.5
CDS CCA 90 bp ACTACAAACGACCTACTACTAACCAGCCAGGAATACCCATGTCTTTaGTTCCATTCTCCAAACCATTCTTTGATTTCCTGTTTAAGCCCA +
Preference number: 5 (lower is better)
Translates to: TTNDLLLTSQEYPCL*FHSPNHSLISCLSP
Trigger: TGGGCTTAAACAGGAAATCAAAGAATGGTTTGGAGAATGGAACCAAAGACATGGGTATTCCTGGCTGGTTAGTAGTAGGTCGTTTGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464278.1
CDS-3UTR CAA 90 bp CTGCATTTCAGTGTGATTAGAAATGCCCCTCCCTCAAAAGACAAGCCAACCACATCTTTATACTGGAGATaGCTGATGTTCTTCTGGTTT +
Preference number: 5 (lower is better)
Translates to: LHFSVIRNAPPSKDKPTTSLYWR*LMFFWF
Trigger: AAACCAGAAGAACATCAGCAATCTCCAGTATAAAGA...TGTGGTTGGCTTGTCTTTTGAGGGAGGGGCATTTCTAATCACACTGAAATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460652.1
CDS-3UTR CAA 90 bp TTGACAGTTAGTTGCGAGGAAAGGGTCCAAAAGGCATGGAATACTTCAGAGACTAATTGCAGTTCCCCGTaGAAGTTCTCCCTTATATTT +
Preference number: 5 (lower is better)
Translates to: LTVSCEERVQKAWNTSETNCSSP*KFSLIF
Trigger: AAATATAAGGGAGAACTTCAACGGGGAACTGCAATT...AGTCTCTGAAGTATTCCATGCCTTTTGGACCCTTTCCTCGCAACTAACTGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp AATCAGACTTGGTCTACCTTTCATCTGTTTATGGTCCTGGGTATATTTTACCGACTGGTGGATCAGAAATaGCAGTTCCCCGTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: NQTWSTFHLFMVLGIFYRLVDQK*QFPVEV
Trigger: AACTTCAACGGGGAACTGCAATTTCTGATCCACCAG...TCGGTAAAATATACCCAGGACCATAAACAGATGAAAGGTAGACCAAGTCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR CAA 90 bp TTTAGAAAGTCAGGTGCATGCTCTCTGTGCTTGGACATTTACACAGTCATCTTTTTGGTGAATGCTGCATaGATCTCATGGATGACACAC +
Preference number: 5 (lower is better)
Translates to: FRKSGACSLCLDIYTVIFLVNAA*ISWMTH
Trigger: GTGTGTCATCCATGAGATCAATGCAGCATTCACCAA...AAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGGGTAGGTCCTTAGATTaGGTGAATGCTGCATTGATC +
Preference number: 5 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQGRSLD*VNAALI
Trigger: GATCAATGCAGCATTCACCAAATCTAAGGACCTACC...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTAAAAGACTGTGGCACATaGGAAAAACCAGATCTGCAT +
Preference number: 5 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLKDCGT*EKPDLH
Trigger: ATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTT...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp GTTTTTCTGATGAGCTGGCGACTAGAGGAAGAAAGGGCTTTTAGGTATCAGTCAAACGAGGTACATCCCTaGAACTTCCACTATCTTTTT +
Preference number: 5 (lower is better)
Translates to: VFLMSWRLEEERAFRYQSNEVHP*NFHYLF
Trigger: AAAAAGATAGTGGAAGTTCAAGGGATGTACCTCGTT...TGACTGATACCTAAAAGCCCTTTCTTCCTCTAGTCGCCAGCTCATCAGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp GTGATTAGAAATGCCCCTCCCTCAAAAGACAAGCCAACCACATTTCCATGCTTTGGTTGGACCCTACCATaGAAATATGATTTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: VIRNAPPSKDKPTTFPCFGWTLP*KYDFVL
Trigger: AAGCACAAAATCATATTTCAATGGTAGGGTCCAACC...AAAGCATGGAAATGTGGTTGGCTTGTCTTTTGAGGGAGGGGCATTTCTAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000460652.1
ENST00000473616.5
ENST00000481592.5
CDS-3UTR CAA 90 bp AGTTATCGGATTAATAGTGAAGTAATGCCATCCGTGCACTGGATCCGCCCATTCTTAAGAATGATCTGGTaGGACCCTACCATTGAAATA +
Preference number: 5 (lower is better)
Translates to: SYRINSEVMPSVHWIRPFLRMIW*DPTIEI
Trigger: TATTTCAATGGTAGGGTCCAACCAGATCATTCTTAA...GAATGGGCGGATCCAGTGCACGGATGGCATTACTTCACTATTAATCCGATAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460652.1
ENST00000473616.5
ENST00000481592.5
CDS GCA 90 bp TTGGAGGACGGCATTGCCTTTATGGTGCAGATGTTCCACAGCATCTaGATCAAAATGATACATTCCTTTGTTTTCCTCAAAGAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: LEDGIAFMVQMFHSI*IKMIHSFVFLKELF
Trigger: AAAAAGCTCTTTGAGGAAAACAAAGGAATGTATCATTTTGATGCAGATGCTGTGGAACATCTGCACCATAAAGGCAATGCCGTCCTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000675747.1
CDS-3UTR CAA 90 bp ATCCTGACAAGCTTTATTAACAACTGCCAACACTACCAAATTATGGCCTCAAGACAAAAACACTGTCAATaGTGGCTGGCATCCGCTTAT +
Preference number: 5 (lower is better)
Translates to: ILTSFINNCQHYQIMASRQKHCQ*WLASAY
Trigger: ATAAGCGGATGCCAGCCACAATTGACAGTGTTTTTG...TCTTGAGGCCATAATTTGGTAGTGTTGGCAGTTGTTAATAAAGCTTGTCAGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp GCCAACACTACCAAATTATGGCCTCAAGAGCATGCAACATCTTGTTCAGTTTTATTCTCCCTCAGAAGGTaGGTGATGTACTTTACATGT +
Preference number: 5 (lower is better)
Translates to: ANTTKLWPQEHATSCSVLFSLRR*VMYFTC
Trigger: ACATGTAAAGTACATCACCAACCTTCTGAGGGAGAA...TAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp GAGGTACATCCCTTGAACTTCCACTATCTTTTTAGAAAAAGTCTTGTTCCTCATCATGTAGCCATAGCCTaGGGAATGGCTTTGCTGATA +
Preference number: 5 (lower is better)
Translates to: EVHPLNFHYLFRKSLVPHHVAIA*GMALLI
Trigger: TATCAGCAAAGCCATTCCCAAGGCTATGGCTACATG...ATGAGGAACAAGACTTTTTCTAAAAAGATAGTGGAAGTTCAAGGGATGTACCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp TGTTGCTATACTTTGCTCAAGAGAGAGAGGATCCCTATACAGCTTTGTTTTCAGACAGAGTTAAGAGAATaGGCTTGGGGTGATTCCAAA +
Preference number: 5 (lower is better)
Translates to: CCYTLLKRERIPIQLCFQTELRE*AWGDSK
Trigger: TTTGGAATCACCCCAAGCCAATTCTCTTAACTCTGT...CTGAAAACAAAGCTGTATAGGGATCCTCTCTCTCTTGAGCAAAGTATAGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTACATCTCTGTATGGAATaGGTAACTTTGTTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLHLCME*VTLFAE
Trigger: CTCAGCAAACAAAGTTACCAATTCCATACAGAGATG...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CAA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAAGGAAAAGGACGTCTTTaGATTAACCCGTTTTGGTGG +
Preference number: 5 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQGKGRL*INPFWW
Trigger: CCACCAAAACGGGTTAATCAAAAGACGTCCTTTTCC...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp GCCAACACTACCAAATTATGGCCTCAAGAGCATGCAACATCTTGTTCAGTTTTAAGAATAGGCAGCAACTaGCTTGCTTGGTTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: ANTTKLWPQEHATSCSVLRIGSN*LAWFSF
Trigger: GAAAGAAAACCAAGCAAGCAAGTTGCTGCCTATTCT...TAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAAATGCTCAGCAATTCATaGCATGGACACTGGAGAATG +
Preference number: 5 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQMLSNS*HGHWRM
Trigger: CATTCTCCAGTGTCCATGCAATGAATTGCTGAGCAT...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAAATTAGGGTGCATTGCTaGCATCTAACAACCCATGCT +
Preference number: 5 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQEIRVHC*HLTTHA
Trigger: AGCATGGGTTGTTAGATGCAAGCAATGCACCCTAAT...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS CCA 90 bp TACTTGACTAGAAAGTTTAGAAGCTTCCACGGCATGTTCAAAATCTaGTCTTCCAATTACAGCGGGCTCTTTATTCATTATTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: YLTRKFRSFHGMFKI*SSNYSGLFIHYSLS
Trigger: GGACAAGGAATAATGAATAAAGAGCCCGCTGTAATTGGAAGACCAGATTTTGAACATGCCGTGGAAGCTTCTAAACTTTCTAGTCAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377119.5
CDS-3UTR CAA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTTTCTTGTACTTCACATaGCTCGCCAGTGTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: LISLNITYKADIPKTRTSFLYFT*LASVAA
Trigger: TGCTGCTACACTGGCGAGCAATGTGAAGTACAAGAA...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp GCCAACACTACCAAATTATGGCCTCAAGAGCATGCAACATCTTGTTCAGTTTTAAATTGCAGTTCCCCGTaGAAGTTCTCCCTTATATTT +
Preference number: 5 (lower is better)
Translates to: ANTTKLWPQEHATSCSVLNCSSP*KFSLIF
Trigger: AAATATAAGGGAGAACTTCAACGGGGAACTGCAATT...TAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTCTGGTGGATCAGAAATaGCAGTTCCCCGTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLILVDQK*QFPVEV
Trigger: AACTTCAACGGGGAACTGCAATTTCTGATCCACCAG...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp GAGGTACATCCCTTGAACTTCCACTATCTTTTTAGAAAAAGTCTTGTTCCTCATTCTGTGCGCCAAACTTaGAGGTCAACAATGATTCCA +
Preference number: 5 (lower is better)
Translates to: EVHPLNFHYLFRKSLVPHSVRQT*RSTMIP
Trigger: TGGAATCATTGTTGACCTCAAAGTTTGGCGCACAGA...ATGAGGAACAAGACTTTTTCTAAAAAGATAGTGGAAGTTCAAGGGATGTACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp GAGGTACATCCCTTGAACTTCCACTATCTTTTTAGAAAAAGTCTTGTTCCTCATTTGGTGAATGCTGCATaGATCTCATGGATGACACAC +
Preference number: 5 (lower is better)
Translates to: EVHPLNFHYLFRKSLVPHLVNAA*ISWMTH
Trigger: GTGTGTCATCCATGAGATCAATGCAGCATTCACCAA...ATGAGGAACAAGACTTTTTCTAAAAAGATAGTGGAAGTTCAAGGGATGTACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp GAGGTACATCCCTTGAACTTCCACTATCTTTTTAGAAAAAGTCTTGTTCCTCATGGTAGGTCCTTAGATTaGGTGAATGCTGCATTGATC +
Preference number: 5 (lower is better)
Translates to: EVHPLNFHYLFRKSLVPHGRSLD*VNAALI
Trigger: GATCAATGCAGCATTCACCAAATCTAAGGACCTACC...ATGAGGAACAAGACTTTTTCTAAAAAGATAGTGGAAGTTCAAGGGATGTACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp ATAAGGAAAGACTGTGGCACATTGGAAAAACCAGATCTGCATCTTCTTCAAGAAACAGAGTTAAGAGAATaGGCTTGGGGTGATTCCAAA +
Preference number: 5 (lower is better)
Translates to: IRKDCGTLEKPDLHLLQETELRE*AWGDSK
Trigger: TTTGGAATCACCCCAAGCCAATTCTCTTAACTCTGT...TTCTTGAAGAAGATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTTCCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTAGGAAATAAATTAGCTTaGGCCTTTGGACTAGTAAAC +
Preference number: 5 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLGNKLA*AFGLVN
Trigger: GTTTACTAGTCCAAAGGCCAAAGCTAATTTATTTCC...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CAA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTATCAGTGAATCTGGTTTaGAAATCGGTGGATGAAATT +
Preference number: 5 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLSVNLV*KSVDEI
Trigger: AATTTCATCCACCGATTTCAAAACCAGATTCACTGA...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp TTCAATAATAGGAACGCGCAGTGCAGCTGCCTATGTTACAGAAGCTTGAATCTATGGAAAGTGGAAAAGTaGTTCAGGCATGTCATTTTT +
Preference number: 5 (lower is better)
Translates to: FNNRNAQCSCLCYRSLNLWKVEK*FRHVIF
Trigger: AAAAATGACATGCCTGAACAACTTTTCCACTTTCCA...TAGATTCAAGCTTCTGTAACATAGGCAGCTGCACTGCGCGTTCCTATTATTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp TGGTCTAATCTTATCCATATTCCTACAAGGTGCTTGTGGAAACTGTGCTTACAACTGAAGAGAGTGCATTaGAGAACGCAGTTCTATCAT +
Preference number: 5 (lower is better)
Translates to: WSNLIHIPTRCLWKLCLQLKRVH*RTQFYH
Trigger: ATGATAGAACTGCGTTCTCAAATGCACTCTCTTCAG...TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAATATGGATAAGATTAGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTTACTTATCCAGGCAGTaGACTTTCTCGGTGGGATAC +
Preference number: 5 (lower is better)
Translates to: LISLNITYKADIPKTRTSYLSRQ*TFSVGY
Trigger: GTATCCCACCGAGAAAGTCAACTGCCTGGATAAGTA...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS-3UTR CAA 90 bp GCAGGTGTATCTAAAATCAGACTTGGTCTACCTTTCATCTGTTTATGGTCCTGGTTAAGAATGATCTGGTaGGACCCTACCATTGAAATA +
Preference number: 5 (lower is better)
Translates to: AGVSKIRLGLPFICLWSWLRMIW*DPTIEI
Trigger: TATTTCAATGGTAGGGTCCAACCAGATCATTCTTAA...CCAGGACCATAAACAGATGAAAGGTAGACCAAGTCTGATTTTAGATACACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS CCA 90 bp AATTTGACTAGAAAGTTTAGAAGCTTCCACGGCATGTTCAAAATCTaGTCTTCCAATTACAGCGGGCTCTTTATTCATTATTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: NLTRKFRSFHGMFKI*SSNYSGLFIHYSLS
Trigger: GGACAAGGAATAATGAATAAAGAGCCCGCTGTAATTGGAAGACCAGATTTTGAACATGCCGTGGAAGCTTCTAAACTTTCTAGTCAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000674540.1
ENST00000675747.1
CDS-3UTR CAA 90 bp AATCAGCTAACACCTTTAATATCTGAGGAGCATCCCACTTCCCTACCACAAAAAATTCCTTGTCCTTTCTaGTATTCTGCATTGCTTATG +
Preference number: 5 (lower is better)
Translates to: NQLTPLISEEHPTSLPQKIPCPF*YSALLM
Trigger: CATAAGCAATGCAGAATACAAGAAAGGACAAGGAAT...TTTTTGTGGTAGGGAAGTGGGATGCTCCTCAGATATTAAAGGTGTTAGCTGATT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp TTTAGAAAGTCAGGTGCATGCTCTCTGTGCTTGGACATTTACACAGTCATCTTTAAAAATTCTGGAGTCTaGTCTAAATCCAGTGATGAC +
Preference number: 5 (lower is better)
Translates to: FRKSGACSLCLDIYTVIFKNSGV*SKSSDD
Trigger: GTCATCACTGGATTTAGACAAGACTCCAGAATTTTT...AAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp GAGGTACATCCCTTGAACTTCCACTATCTTTTTAGAAAAAGTCTTGTTCCTCATTTTCAGAGGCTCGCTTaGCTCTTTGGATATCAAGAA +
Preference number: 5 (lower is better)
Translates to: EVHPLNFHYLFRKSLVPHFQRLA*LFGYQE
Trigger: TTCTTGATATCCAAAGAGCAAAGCGAGCCTCTGAAA...ATGAGGAACAAGACTTTTTCTAAAAAGATAGTGGAAGTTCAAGGGATGTACCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp GAGGTACATCCCTTGAACTTCCACTATCTTTTTAGAAAAAGTCTTGTTCCTCATTTTTCTAAGTCCTTCTaGTATTGTTTCTGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: EVHPLNFHYLFRKSLVPHFSKSF*YCFWLA
Trigger: GGCCAGCCAGAAACAATACAAGAAGGACTTAGAAAA...ATGAGGAACAAGACTTTTTCTAAAAAGATAGTGGAAGTTCAAGGGATGTACCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp GTGTATCTAAAATCAGACTTGGTCTACCTTTCATCTGTTTATGGTCCTGGGTATAATTGCAGTTCCCCGTaGAAGTTCTCCCTTATATTT +
Preference number: 5 (lower is better)
Translates to: VYLKSDLVYLSSVYGPGYNCSSP*KFSLIF
Trigger: AAATATAAGGGAGAACTTCAACGGGGAACTGCAATT...ATACCCAGGACCATAAACAGATGAAAGGTAGACCAAGTCTGATTTTAGATACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR CAA 90 bp GCCAACACTACCAAATTATGGCCTCAAGAGCATGCAACATCTTGTTCAGTTTTAATTATAATTTGCCCTTaGCAGAGTAGCTGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: ANTTKLWPQEHATSCSVLIIICP*QSSCEV
Trigger: AACTTCACAGCTACTCTGCAAAGGGCAAATTATAAT...TAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTGGAAAAGGACGTCTTTaGATTAACCCGTTTTGGTGG +
Preference number: 5 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLIGKGRL*INPFWW
Trigger: CCACCAAAACGGGTTAATCAAAAGACGTCCTTTTCC...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CAA 90 bp TTTAGAAAGTCAGGTGCATGCTCTCTGTGCTTGGACATTTACACAGTCATCTTTTGGAAAGTGGAAAAGTaGTTCAGGCATGTCATTTTT +
Preference number: 5 (lower is better)
Translates to: FRKSGACSLCLDIYTVIFWKVEK*FRHVIF
Trigger: AAAAATGACATGCCTGAACAACTTTTCCACTTTCCA...AAAGATGACTGTGTAAATGTCCAAGCACAGAGAGCATGCACCTGACTTTCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp GAGGTACATCCCTTGAACTTCCACTATCTTTTTAGAAAAAGTCTTGTTCCTCATATTCCTACAAGGTGCTaGTGGAAACTGTGCTTACAA +
Preference number: 5 (lower is better)
Translates to: EVHPLNFHYLFRKSLVPHIPTRC*WKLCLQ
Trigger: TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAAT...ATGAGGAACAAGACTTTTTCTAAAAAGATAGTGGAAGTTCAAGGGATGTACCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTCAGCAACTTGCTTGCTaGGTTTTCTTTCCAAGAGCA +
Preference number: 5 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLIQQLAC*VFFPRA
Trigger: TGCTCTTGGAAAGAAAACCAAGCAAGCAAGTTGCTG...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTATGCTCAGCAATTCATaGCATGGACACTGGAGAATG +
Preference number: 5 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLIMLSNS*HGHWRM
Trigger: CATTCTCCAGTGTCCATGCAATGAATTGCTGAGCAT...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTATGCCTGTAATAGACTaGGTGCTGCTTCCTAAATGC +
Preference number: 5 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLIMPVID*VLLPKC
Trigger: GCATTTAGGAAGCAGCACCAAGTCTATTACAGGCAT...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp GCCAACACTACCAAATTATGGCCTCAAGAGCATGCAACATCTTGTTCAGTTTTAGTGAAGCCCCTTCATTaGCAAAACATTCAATGTTTT +
Preference number: 5 (lower is better)
Translates to: ANTTKLWPQEHATSCSVLVKPLH*QNIQCF
Trigger: AAAACATTGAATGTTTTGCAAATGAAGGGGCTTCAC...TAAAACTGAACAAGATGTTGCATGCTCTTGAGGCCATAATTTGGTAGTGTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp GTATCTAAAATCAGACTTGGTCTACCTTTCATCTGTTTATGGTCCTGGGTATATAATTGCAGTTCCCCGTaGAAGTTCTCCCTTATATTT +
Preference number: 5 (lower is better)
Translates to: VSKIRLGLPFICLWSWVYNCSSP*KFSLIF
Trigger: AAATATAAGGGAGAACTTCAACGGGGAACTGCAATT...ATATACCCAGGACCATAAACAGATGAAAGGTAGACCAAGTCTGATTTTAGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS-3UTR CAA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGGTGCTTCTGTCAGGCTaGAGAACACATCAAACTTTA +
Preference number: 5 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGVLLSG*RTHQTL
Trigger: TAAAGTTTGATGTGTTCTCAAGCCTGACAGAAGCAC...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGATTCCTACAAGGTGCTaGTGGAAACTGTGCTTACAA +
Preference number: 5 (lower is better)
Translates to: KFILCSESSLTIILSYNRIPTRC*WKLCLQ
Trigger: TTGTAAGCACAGTTTCCACAAGCACCTTGTAGGAAT...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp TTAATTTCCTTGAATATAACATATAAGGCAGATATCCCCAAGACCCGTACATCTAAAGACTGTGGCACATaGGAAAAACCAGATCTGCAT +
Preference number: 5 (lower is better)
Translates to: LISLNITYKADIPKTRTSKDCGT*EKPDLH
Trigger: ATGCAGATCTGGTTTTTCCAATGTGCCACAGTCTTT...AGATGTACGGGTCTTGGGGATATCTGCCTTATATGTTATATTCAAGGAAATTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS CCA 90 bp TTACGGTTGTATTTTATCCCACACCTCAGTAACATGCAGACTGAGTaGTCATTTCCAAATGATTTCAAATCCTCAATAAACAAACATGAG +
Preference number: 5 (lower is better)
Translates to: LRLYFIPHLSNMQTE*SFPNDFKSSINKHE
Trigger: CTCATGTTTGTTTATTGAGGATTTGAAATCATTTGGAAATGACCACTCAGTCTGCATGTTACTGAGGTGTGGGATAAAATACAACCGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674540.1
ENST00000675747.1
CDS-3UTR CAA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGCATCTCTGTATGGAATaGGTAACTTTGTTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: KFILCSESSLTIILSYNRHLCME*VTLFAE
Trigger: CTCAGCAAACAAAGTTACCAATTCCATACAGAGATG...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGGTCATTTCAATGCTGTaGTACATTATGCAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGVISML*YIMQGK
Trigger: TTTCCCCTGCATAATGTACAACAGCATTGAAATGAC...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377122.9
ENST00000676125.1
CDS-3UTR CAA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTTTTTACATTACTGATTaGCTCCTGAGTCCTCTTCAG +
Preference number: 5 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLIFYITD*LLSPLQ
Trigger: CTGAAGAGGACTCAGGAGCAAATCAGTAATGTAAAA...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS CCA 90 bp AGACTCCTTTCCATAGCAACTAGGTTCAGGTATGAAATTGCAGTATaGCAACATCCTATGATTAAAATGGAAATTGACACAGGATTAAAA +
Preference number: 5 (lower is better)
Translates to: RLLSIATRFRYEIAV*QHPMIKMEIDTGLK
Trigger: TTTTAATCCTGTGTCAATTTCCATTTTAATCATAGGATGTTGCCATACTGCAATTTCATACCTGAACCTAGTTGCTATGGAAAGGAGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464278.1
CDS-3UTR CAA 90 bp AAGTTCATCTTGTGTAGTGAATCCAGCCTCACAATTATTCTATCTTACAATAGGTCTTTATACTGGAGATaGCTGATGTTCTTCTGGTTT +
Preference number: 5 (lower is better)
Translates to: KFILCSESSLTIILSYNRSLYWR*LMFFWF
Trigger: AAACCAGAAGAACATCAGCAATCTCCAGTATAAAGA...CCTATTGTAAGATAGAATAATTGTGAGGCTGGATTCACTACACAAGATGAACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS-3UTR CAA 90 bp ACCAGTCAATATAATTTTAACCAGACTGTCCTTCTGCCACTGTTTACACTTATTATTATAATTTGCCCTTaGCAGAGTAGCTGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: TSQYNFNQTVLLPLFTLIIIICP*QSSCEV
Trigger: AACTTCACAGCTACTCTGCAAAGGGCAAATTATAAT...AATAAGTGTAAACAGTGGCAGAAGGACAGTCTGGTTAAAATTATATTGACTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CAA 90 bp AAGGGACAATCAACTTCTCTATTAAAGTCTACAAAAATACATTTCCCAGAAGGGGGAAATAAATTAGCTTaGGCCTTTGGACTAGTAAAC +
Preference number: 5 (lower is better)
Translates to: KGQSTSLLKSTKIHFPEGGNKLA*AFGLVN
Trigger: GTTTACTAGTCCAAAGGCCAAAGCTAATTTATTTCC...CCCTTCTGGGAAATGTATTTTTGTAGACTTTAATAGAGAAGTTGATTGTCCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000676125.1
CDS-3UTR CAA 90 bp TCTACCTTTCATCTGTTTATGGTCCTGGGTATATTTTACCGAGCTAATATTTTCTTAAGAATGATCTGGTaGGACCCTACCATTGAAATA +
Preference number: 5 (lower is better)
Translates to: STFHLFMVLGIFYRANIFLRMIW*DPTIEI
Trigger: TATTTCAATGGTAGGGTCCAACCAGATCATTCTTAA...GAAAATATTAGCTCGGTAAAATATACCCAGGACCATAAACAGATGAAAGGTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460652.1
ENST00000481592.5
CDS CCA 72 bp ATCGCGGTTCCCGGGGGCGGCGGCGGCGGCGGCTGCTaGCTCCCAGGAGCCGCTGTGACATCCCCCGGCGAG +
Preference number: 6 (lower is better)
Translates to: IAVPGGGGGGGC*LPGAAVTSPGE
Trigger: CTCGCCGGGGGATGTCACAGCGGCTCCTGGGAGCCAGCAGCCGCCGCCGCCGCCGCCCCCGGGAACCGCGAT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS GCA 72 bp ATGATCGCGGTTCCCGGGGGCGGCGGCGGCGGCGGCTaGTGGCTCCCAGGAGCCGCTGTGACATCCCCCGGC +
Preference number: 6 (lower is better)
Translates to: MIAVPGGGGGGG*WLPGAAVTSPG
Trigger: GCCGGGGGATGTCACAGCGGCTCCTGGGAGCCAGCAGCCGCCGCCGCCGCCGCCCCCGGGAACCGCGATCAT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS TCA 72 bp CCGCTGGCTCTGCGTCGCTCGCACTCCAGGTACGGGTaGCTCACACAGTCACTCGCGCCCGCCCCTCGCGCT +
Preference number: 6 (lower is better)
Translates to: PLALRRSHSRYG*LTQSLAPAPRA
Trigger: AGCGCGAGGGGCGGGCGCGAGTGACTGTGTGAGTCACCCGTACCTGGAGTGCGAGCGACGCAGAGCCAGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417816.2
CDS GCA 72 bp CTGGTCCCAGAGACAGCCTTGGGGACTTGGCCCAGTTaGCTGGATCTGGTTCAGGAGCTGCCTGGATGGGCG +
Preference number: 6 (lower is better)
Translates to: LVPETALGTWPS*LDLVQELPGWA
Trigger: CGCCCATCCAGGCAGCTCCTGAACCAGATCCAGGCAACTGGGCCAAGTCCCCAAGGCTGTCTCTGGGACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529198.1
ENST00000534331.7
ENST00000649437.1
CDS CCA 72 bp TCCCAGAGACAGCCTTGGGGACTTGGCCCAGTTGCCTaGATCTGGTTCAGGAGCTGCCTGGATGGGCGGCTT +
Preference number: 6 (lower is better)
Translates to: SQRQPWGLGPVA*IWFRSCLDGRL
Trigger: AAGCCGCCCATCCAGGCAGCTCCTGAACCAGATCCAGGCAACTGGGCCAAGTCCCCAAGGCTGTCTCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529198.1
ENST00000534331.7
ENST00000649437.1
CDS CAA 72 bp TCTGGTCCCAGAGACAGCCTTGGGGACTTGGCCCAGTaGCCTGGATCTGGTTCAGGAGCTGCCTGGATGGGC +
Preference number: 6 (lower is better)
Translates to: SGPRDSLGDLAQ*PGSGSGAAWMG
Trigger: GCCCATCCAGGCAGCTCCTGAACCAGATCCAGGCAACTGGGCCAAGTCCCCAAGGCTGTCTCTGGGACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529198.1
ENST00000534331.7
ENST00000649437.1
CDS CCA 72 bp ACTGAAGCTGACTCTCCGCAGCCACCTGGCAAGCGTTaGCCAGCTTTGCAGCCTTCTGGTCTCCCCAACCAG +
Preference number: 6 (lower is better)
Translates to: TEADSPQPPGKR*PALQPSGLPNQ
Trigger: CTGGTTGGGGAGACCAGAAGGCTGCAAAGCTGGCCAACGCTTGCCAGGTGGCTGCGGAGAGTCAGCTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529198.1
ENST00000534331.7
ENST00000649437.1
CDS CCA 72 bp CTGGACACGCAGTTCATGCCCGCACTCAGCTGCTCCTaGTTTCGCCTCACTCTCTCTATCTCCGGGGTCATG +
Preference number: 6 (lower is better)
Translates to: LDTQFMPALSCS*FRLTLSISGVM
Trigger: CATGACCCCGGAGATAGAGAGAGTGAGGCGAAACCAGGAGCAGCTGAGTGCGGGCATGAACTGCGTGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481592.5
CDS CAA 90 bp TTCCCTTTGGTTATACCTTCTGGTCCCAGAGACAGCCTTGGGGACTaGGCCCAGTTGCCTGGATCTGGTTCAGGAGCTGCCTGGATGGGC +
Preference number: 6 (lower is better)
Translates to: FPLVIPSGPRDSLGD*AQLPGSGSGAAWMG
Trigger: GCCCATCCAGGCAGCTCCTGAACCAGATCCAGGCAACTGGGCCAAGTCCCCAAGGCTGTCTCTGGGACCAGAAGGTATAACCAAAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529198.1
ENST00000534331.7
ENST00000649437.1
CDS GCA 72 bp CCTGGGAGGCCTCAGGCCCTTCTCGGCTCTCCGTTCTaGCTTACCAGGCCTGTTCATGTCTGGAATGTACAT +
Preference number: 6 (lower is better)
Translates to: PGRPQALLGSPF*LTRPVHVWNVH
Trigger: ATGTACATTCCAGACATGAACAGGCCTGGTAAGGCAGAACGGAGAGCCGAGAAGGGCCTGAGGCCTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649437.1
CDS CAA 72 bp GTTATACCTTCTGGTCCCAGAGACAGCCTTGGGGACTaGGCCCAGTTGCCTGGATCTGGTTCAGGAGCTGCC +
Preference number: 6 (lower is better)
Translates to: VIPSGPRDSLGD*AQLPGSGSGAA
Trigger: GGCAGCTCCTGAACCAGATCCAGGCAACTGGGCCAAGTCCCCAAGGCTGTCTCTGGGACCAGAAGGTATAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529198.1
ENST00000534331.7
ENST00000649437.1
CDS TCA 72 bp CAGGTAACTGGCCCCTGCCACACCTGGGTGACACAGTaGGTCAGTTCTTCAAAACAGGCAGGTCCACTGGCT +
Preference number: 6 (lower is better)
Translates to: QVTGPCHTWVTQ*VSSSKQAGPLA
Trigger: AGCCAGTGGACCTGCCTGTTTTGAAGAACTGACTCACTGTGTCACCCAGGTGTGGCAGGGGCCAGTTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464278.1
CDS GCA 72 bp GGAGCTCACTCGCAAACTCTGCTCCATTGTCAGCTGTaGGGGCTGCCGCAGTTGTTAGAGCTGGAAGAATCG +
Preference number: 6 (lower is better)
Translates to: GAHSQTLLHCQL*GLPQLLELEES
Trigger: CGATTCTTCCAGCTCTAACAACTGCGGCAGCCCGCACAGCTGACAATGGAGCAGAGTTTGCGAGTGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675114.1
CDS CCA 72 bp TTATACCTTCTGGTCCCAGAGACAGCCTTGGGGACTTaGCCCAGTTGCCTGGATCTGGTTCAGGAGCTGCCT +
Preference number: 6 (lower is better)
Translates to: LYLLVPETALGT*PSCLDLVQELP
Trigger: AGGCAGCTCCTGAACCAGATCCAGGCAACTGGGCCAAGTCCCCAAGGCTGTCTCTGGGACCAGAAGGTATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529198.1
ENST00000534331.7
ENST00000649437.1
CDS CCA 72 bp AGGAAACAGAAACGACTTGCCGCACTCAGCTGCTCCTaGTTTCGCCTCACTCTCTCTATCTCCGGGGTCATG +
Preference number: 6 (lower is better)
Translates to: RKQKRLAALSCS*FRLTLSISGVM
Trigger: CATGACCCCGGAGATAGAGAGAGTGAGGCGAAACCAGGAGCAGCTGAGTGCGGCAAGTCGTTTCTGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493005.5
ENST00000675747.1
CDS CCA 72 bp CCCTTCTCGGCTCTCCGTTCTGCCTTACCAGGCCTATaGGATAAAGTGCAGCTGTCCGTTCTTCAAGCCTGT +
Preference number: 6 (lower is better)
Translates to: PFSALRSALPGL*DKVQLSVLQAC
Trigger: ACAGGCTTGAAGAACGGACAGCTGCACTTTATCCCATAGGCCTGGTAAGGCAGAACGGAGAGCCGAGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529198.1
CDS CAA 72 bp GGTCTGGTGCATGTAGCCATAGCCTTGGGAATGGCTTaGCTGATAGGCTCCGGGAAGAACAGGTGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: GLVHVAIALGMA*LIGSGKNRCSF
Trigger: GAAGGAGCACCTGTTCTTCCCGGAGCCTATCAGCAAAGCCATTCCCAAGGCTATGGCTACATGCACCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS CAA 72 bp CAATCCCTTCAGGCCTACCAGGGCCACCCAAAGGCATaGTTATCACTGGGGTTAAATTCCTGGCCCTGCCCT +
Preference number: 6 (lower is better)
Translates to: QSLQAYQGHPKA*LSLGLNSWPCP
Trigger: AGGGCAGGGCCAGGAATTTAACCCCAGTGATAACAATGCCTTTGGGTGGCCCTGGTAGGCCTGAAGGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485750.1
CDS GCA 72 bp CTGACCTGTCGTCTCCGAGACCTGTACCGAAAGTACTaGTGGAATGGGATCGAGACCAGTGTCGCCTATAGT +
Preference number: 6 (lower is better)
Translates to: LTCRLRDLYRKY*WNGIETSVAYS
Trigger: ACTATAGGCGACACTGGTCTCGATCCCATTCCAGCAGTACTTTCGGTACAGGTCTCGGAGACGACAGGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS CCA 72 bp ACCTGTCGTCTCCGAGACCTGTACCGAAAGTACTGCTaGAATGGGATCGAGACCAGTGTCGCCTATAGTGAC +
Preference number: 6 (lower is better)
Translates to: TCRLRDLYRKYC*NGIETSVAYSD
Trigger: GTCACTATAGGCGACACTGGTCTCGATCCCATTCCAGCAGTACTTTCGGTACAGGTCTCGGAGACGACAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS GCA 72 bp CTCTCCGTTCTGCCTTACCAGGCCTATGGGATAAAGTaGAGCTGTCCGTTCTTCAAGCCTGTTCATGTCTGG +
Preference number: 6 (lower is better)
Translates to: LSVLPYQAYGIK*SCPFFKPVHVW
Trigger: CCAGACATGAACAGGCTTGAAGAACGGACAGCTGCACTTTATCCCATAGGCCTGGTAAGGCAGAACGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529198.1
CDS GCA 72 bp AAGAAGCTGAAAAATGAGGAGCTCACTCGCAAACTCTaGTCCATTGTCAGCTGTGCGGGCTGCCGCAGTTGT +
Preference number: 6 (lower is better)
Translates to: KKLKNEELTRKL*SIVSCAGCRSC
Trigger: ACAACTGCGGCAGCCCGCACAGCTGACAATGGAGCAGAGTTTGCGAGTGAGCTCCTCATTTTTCAGCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675114.1
CDS CCA 72 bp TTCTGGCTGGCCATCTCGGATGCTTTCTTAGCTCTCTaGACATCAAGAGTGTCTGTGCTCACCTGCATCCCT +
Preference number: 6 (lower is better)
Translates to: FWLAISDAFLAL*TSRVSVLTCIP
Trigger: AGGGATGCAGGTGAGCACAGACACTCTTGATGTCCAGAGAGCTAAGAAAGCATCCGAGATGGCCAGCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377122.9
ENST00000493005.5
ENST00000498424.2
ENST00000675747.1
CDS CAA 72 bp GGTCTGGTGCATGTAGCCATAGCCTTGGGAATGGCTTaGCTGATAGGCTCCGGGAAGAACAGGTGCAACAAT +
Preference number: 6 (lower is better)
Translates to: GLVHVAIALGMA*LIGSGKNRCNN
Trigger: ATTGTTGCACCTGTTCTTCCCGGAGCCTATCAGCAAAGCCATTCCCAAGGCTATGGCTACATGCACCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417816.2
ENST00000675114.1
ENST00000675700.1
ENST00000675702.1
CDS CAA 72 bp ACTCTGCTCCATTGTCAGCTGTGCGGGCTGCCGCAGTaGTTAGAGCTGGAAGAATCGATGTTGCTAAGCAAC +
Preference number: 6 (lower is better)
Translates to: TLLHCQLCGLPQ*LELEESMLLSN
Trigger: GTTGCTTAGCAACATCGATTCTTCCAGCTCTAACAACTGCGGCAGCCCGCACAGCTGACAATGGAGCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675114.1
CDS CAA 90 bp GTTTATGGGTGCTTGGGGCCCTTTCCCTTCTCCTTACGCCTGCCTTaGATCTTTAACCAGTCATTTATGGCTCTCTGGAAGGGAAGCAGG +
Preference number: 6 (lower is better)
Translates to: VYGCLGPFPFSLRLP*IFNQSFMALWKGSR
Trigger: CCTGCTTCCCTTCCAGAGAGCCATAAATGACTGGTTAAAGATCAAAGGCAGGCGTAAGGAGAAGGGAAAGGGCCCCAAGCACCCATAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485750.1
CDS CAA 90 bp CACTCGCAAACTCTGCTCCATTGTCAGCTGTGCGGGCTGCCGCAGTaGTTAGAGCTGGAAGAATCGATGTTGCTAAGCAACACTTTTGCA +
Preference number: 6 (lower is better)
Translates to: HSQTLLHCQLCGLPQ*LELEESMLLSNTFA
Trigger: TGCAAAAGTGTTGCTTAGCAACATCGATTCTTCCAGCTCTAACAACTGCGGCAGCCCGCACAGCTGACAATGGAGCAGAGTTTGCGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675114.1
CDS TCA 72 bp CTCTTCACTGTGCAGGCTACGTTCTGTGTTCTGCATTaGCGGCTGTGCTTAGATCTTGTACCCTCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: LFTVQATFCVLH*RLCLDLVPSAP
Trigger: AGGAGCTGAGGGTACAAGATCTAAGCACAGCCGTCAATGCAGAACACAGAACGTAGCCTGCACAGTGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675747.1
CDS GCA 72 bp CCTGGTTTCGCCTCACTCTCTCTATCTCCGGGGTCATaGTTACCGGAGTGGCCTTGTAGTTTTGCTCTTTAT +
Preference number: 6 (lower is better)
Translates to: PGFASLSLSPGS*LPEWPCSFALY
Trigger: ATAAAGAGCAAAACTACAAGGCCACTCCGGTAAGCATGACCCCGGAGATAGAGAGAGTGAGGCGAAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377122.9
ENST00000460652.1
ENST00000493005.5
ENST00000675747.1
CDS GCA 72 bp TATAAAAGGAAACAGAAACGACTTGCCGCACTCAGCTaGTCCTGGTTTCGCCTCACTCTCTCTATCTCCGGG +
Preference number: 6 (lower is better)
Translates to: YKRKQKRLAALS*SWFRLTLSISG
Trigger: CCCGGAGATAGAGAGAGTGAGGCGAAACCAGGAGCAGCTGAGTGCGGCAAGTCGTTTCTGTTTCCTTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493005.5
ENST00000675747.1
CDS CCA 72 bp AGTTCTCCCTTATATTTTACCGCACTCAGCTGCTCCTaGTTTCGCCTCACTCTCTCTATCTCCGGGGTCATG +
Preference number: 6 (lower is better)
Translates to: SSPLYFTALSCS*FRLTLSISGVM
Trigger: CATGACCCCGGAGATAGAGAGAGTGAGGCGAAACCAGGAGCAGCTGAGTGCGGTAAAATATAAGGGAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000460652.1
ENST00000676125.1
CDS CCA 72 bp AGGTTATTTCCTTCATTCACAGGCCTGAAGCAGAAGTaGATGGACCAGGGATGGGGTAGAAAGGTGAGCCTG +
Preference number: 6 (lower is better)
Translates to: RLFPSFTGLKQK*MDQGWGRKVSL
Trigger: CAGGCTCACCTTTCTACCCCATCCCTGGTCCATCCACTTCTGCTTCAGGCCTGTGAATGAAGGAAATAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675114.1
CDS CAA 72 bp ACTCTTCACTGTGCAGGCTACGTTCTGTGTTCTGCATaGACGGCTGTGCTTAGATCTTGTACCCTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: TLHCAGYVLCSA*TAVLRSCTLSS
Trigger: GGAGCTGAGGGTACAAGATCTAAGCACAGCCGTCAATGCAGAACACAGAACGTAGCCTGCACAGTGAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675747.1
CDS CAA 72 bp GGTCTGGTGCATGTAGCCATAGCCTTGGGAATGGCTTaGCTGATAGGCTCCGGGAAGAACAGGTGTGTTTTA +
Preference number: 6 (lower is better)
Translates to: GLVHVAIALGMA*LIGSGKNRCVL
Trigger: TAAAACACACCTGTTCTTCCCGGAGCCTATCAGCAAAGCCATTCCCAAGGCTATGGCTACATGCACCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676125.1
CDS CAA 90 bp ATCTGCCAGCGTCTTGATCTTGGACTTCCCAACGTCAAGAAATTCTaGGCTCTTTTTCCACCCACGCAGGGAAACCAGGAGGAATTCCAG +
Preference number: 6 (lower is better)
Translates to: ICQRLDLGLPNVKKF*ALFPPTQGNQEEFQ
Trigger: CTGGAATTCCTCCTGGTTTCCCTGCGTGGGTGGAAAAAGAGCCAAGAATTTCTTGACGTTGGGAAGTCCAAGATCAAGACGCTGGCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675702.1
CDS TCA 72 bp GCCATCCATGAACCAGGAAGGAATCTGCCAGCGTCTTaGTCTTGGACTTCCCAACGTCAAGAAATTCTTGGC +
Preference number: 6 (lower is better)
Translates to: AIHEPGRNLPAS*SWTSQRQEILG
Trigger: GCCAAGAATTTCTTGACGTTGGGAAGTCCAAGATCAAGACGCTGGCAGATTCCTTCCTGGTTCATGGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675702.1
CDS GCA 72 bp GAGAAAAGATGGCCATCCATGAACCAGGAAGGAATCTaGCAGCGTCTTGATCTTGGACTTCCCAACGTCAAG +
Preference number: 6 (lower is better)
Translates to: EKRWPSMNQEGI*QRLDLGLPNVK
Trigger: CTTGACGTTGGGAAGTCCAAGATCAAGACGCTGGCAGATTCCTTCCTGGTTCATGGATGGCCATCTTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675702.1
CDS CCA 72 bp TTGGTGAATGCTGCATTGATCTCATGGATGACACACTaGTCTGGTGCATGTAGCCATAGCCTTGGGAATGGC +
Preference number: 6 (lower is better)
Translates to: LVNAALISWMTH*SGACSHSLGNG
Trigger: GCCATTCCCAAGGCTATGGCTACATGCACCAGACCAGTGTGTCATCCATGAGATCAATGCAGCATTCACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000675114.1
ENST00000675700.1
ENST00000675702.1
ENST00000676125.1
CDS CAA 90 bp TTACCAGATGAAATTGGCATAGTCTATGCGTGCACTGAGTACTGCTaGCACCCCACAGCAACACAAACACTTCCAAGTCATCCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: LPDEIGIVYACTEYC*HPTATQTLPSHPAS
Trigger: GGAGGCTGGATGACTTGGAAGTGTTTGTGTTGCTGTGGGGTGCAAGCAGTACTCAGTGCACGCATAGACTATGCCAATTTCATCTGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675747.1
CDS TCA 72 bp CAAGCTCTGAGGCTGTGCCACACCTGGACAGCGTGTTaGCAATACTTACGCATTACAATAGGGCTTCTTTTC +
Preference number: 6 (lower is better)
Translates to: QALRLCHTWTAC*QYLRITIGLLF
Trigger: GAAAAGAAGCCCTATTGTAATGCGTAAGTATTGTCAACACGCTGTCCAGGTGTGGCACAGCCTCAGAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464278.1
CDS TCA 72 bp GGGGTTAAATTCCTGGCCCTGCCCTGTAAAGAATCCTaGATCCTGATGTGGTCCATAAAGCCTGATGGAAAC +
Preference number: 6 (lower is better)
Translates to: GVKFLALPCKES*ILMWSIKPDGN
Trigger: GTTTCCATCAGGCTTTATGGACCACATCAGGATTCAGGATTCTTTACAGGGCAGGGCCAGGAATTTAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485750.1
CDS TCA 72 bp TGCCATATGAGGACACAGAGAAAAGATGGCCATCCATaGACCAGGAAGGAATCTGCCAGCGTCTTGATCTTG +
Preference number: 6 (lower is better)
Translates to: CHMRTQRKDGHP*TRKESASVLIL
Trigger: CAAGATCAAGACGCTGGCAGATTCCTTCCTGGTTCATGGATGGCCATCTTTTCTCTGTGTCCTCATATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675702.1
CDS GCA 72 bp CAGGGTTTACCAGATGAAATTGGCATAGTCTATGCGTaGACTGAGTACTGCTTGCACCCCACAGCAACACAA +
Preference number: 6 (lower is better)
Translates to: QGLPDEIGIVYA*TEYCLHPTATQ
Trigger: TTGTGTTGCTGTGGGGTGCAAGCAGTACTCAGTGCACGCATAGACTATGCCAATTTCATCTGGTAAACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675747.1
CDS CCA 72 bp TATGATCTTAGAGATCTGGGTTGCCATCTTGATGTCTaGTCGGTCAAGTTCTGCACTGTACGTGTGGGTGTC +
Preference number: 6 (lower is better)
Translates to: YDLRDLGCHLDV*SVKFCTVRVGV
Trigger: GACACCCACACGTACAGTGCAGAACTTGACCGACCAGACATCAAGATGGCAACCCAGATCTCTAAGATCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377119.5
ENST00000377122.9
ENST00000674540.1
ENST00000675747.1
CDS CCA 72 bp AACTCCCTTTTGCCATATGAGGACACAGAGAAAAGATaGCCATCCATGAACCAGGAAGGAATCTGCCAGCGT +
Preference number: 6 (lower is better)
Translates to: NSLLPYEDTEKR*PSMNQEGICQR
Trigger: ACGCTGGCAGATTCCTTCCTGGTTCATGGATGGCCATCTTTTCTCTGTGTCCTCATATGGCAAAAGGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675702.1
CDS CAA 72 bp TGGCTCGGTAGGTCCTTAGATTTGGTGAATGCTGCATaGATCTCATGGATGACACACTGGTCTGGTGCATGT +
Preference number: 6 (lower is better)
Translates to: WLGRSLDLVNAA*ISWMTHWSGAC
Trigger: ACATGCACCAGACCAGTGTGTCATCCATGAGATCAATGCAGCATTCACCAAATCTAAGGACCTACCGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377122.9
ENST00000417816.2
ENST00000675114.1
ENST00000675700.1
ENST00000675702.1
ENST00000676125.1
CDS CAA 90 bp CATCACCAGCAGAGAGGATACCCAAGATTCAGAAGCAACTCCCTTTaGCCATATGAGGACACAGAGAAAAGATGGCCATCCATGAACCAG +
Preference number: 6 (lower is better)
Translates to: HHQQRGYPRFRSNSL*PYEDTEKRWPSMNQ
Trigger: CTGGTTCATGGATGGCCATCTTTTCTCTGTGTCCTCATATGGCAAAAGGGAGTTGCTTCTGAATCTTGGGTATCCTCTCTGCTGGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675702.1
CDS CAA 90 bp TTGTATTCTGCATTGCTTATGATCTTAGAGATCTGGGTTGCCATCTaGATGTCTGGTCGGTCAAGTTCTGCACTGTACGTGTGGGTGTCC +
Preference number: 6 (lower is better)
Translates to: LYSALLMILEIWVAI*MSGRSSSALYVWVS
Trigger: GGACACCCACACGTACAGTGCAGAACTTGACCGACCAGACATCAAGATGGCAACCCAGATCTCTAAGATCATAAGCAATGCAGAATACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377119.5
ENST00000377122.9
ENST00000674540.1
ENST00000675747.1
CDS CAA 90 bp TCCAATAGGAAGCACGGTGTAGGAGGATCGAAGACATCAGAAAGTTaGGGGAATATCTGTGGACTTCCCCTCTCCAAGAAAGTCCTGAAT +
Preference number: 6 (lower is better)
Translates to: SNRKHGVGGSKTSES*GNICGLPLSKKVLN
Trigger: ATTCAGGACTTTCTTGGAGAGGGGAAGTCCACAGATATTCCCCAAACTTTCTGATGTCTTCGATCCTCCTACACCGTGCTTCCTATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485750.1
CDS GCA 72 bp GTCCTTCTTGTATTGTTTCTGGCTGGCCATCTCGGATaGTTTCTTAGCTCTCTGGACATCAAGAGTGTCTGT +
Preference number: 6 (lower is better)
Translates to: VLLVLFLAGHLG*FLSSLDIKSVC
Trigger: ACAGACACTCTTGATGTCCAGAGAGCTAAGAAAGCATCCGAGATGGCCAGCCAGAAACAATACAAGAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377122.9
ENST00000493005.5
ENST00000498424.2
ENST00000675747.1
CDS GCA 72 bp GATGAAATTGGCATAGTCTATGCGTGCACTGAGTACTaGTTGCACCCCACAGCAACACAAACACTTCCAAGT +
Preference number: 6 (lower is better)
Translates to: DEIGIVYACTEY*LHPTATQTLPS
Trigger: ACTTGGAAGTGTTTGTGTTGCTGTGGGGTGCAAGCAGTACTCAGTGCACGCATAGACTATGCCAATTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675747.1
CDS CAA 72 bp GCATTGCTTATGATCTTAGAGATCTGGGTTGCCATCTaGATGTCTGGTCGGTCAAGTTCTGCACTGTACGTG +
Preference number: 6 (lower is better)
Translates to: ALLMILEIWVAI*MSGRSSSALYV
Trigger: CACGTACAGTGCAGAACTTGACCGACCAGACATCAAGATGGCAACCCAGATCTCTAAGATCATAAGCAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377119.5
ENST00000377122.9
ENST00000674540.1
ENST00000675747.1
CDS CAA 72 bp TCAAGCTCTGAGGCTGTGCCACACCTGGACAGCGTGTaGACAATACTTACGCATTACAATAGGGCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: SSSEAVPHLDSV*TILTHYNRASF
Trigger: AAAAGAAGCCCTATTGTAATGCGTAAGTATTGTCAACACGCTGTCCAGGTGTGGCACAGCCTCAGAGCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464278.1
CDS TCA 72 bp CTCGCCTTTTCAGAGAGCATATGGAGACTTCTAGACTaGATATTGTCTTCCAGGGGATCAAGGTCGAAGATG +
Preference number: 6 (lower is better)
Translates to: LAFSESIWRLLD*ILSSRGSRSKM
Trigger: CATCTTCGACCTTGATCCCCTGGAAGACAATATTCAGTCTAGAAGTCTCCATATGCTCTCTGAAAAGGCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377122.9
CDS GCA 72 bp GCAACACAGTCCCAAATTTCCTGGACACGCAGTTCATaGCCTTCAACAAGGAAATGTGAAAAGGAACATCCA +
Preference number: 6 (lower is better)
Translates to: ATQSQISWTRSS*PSTRKCEKEHP
Trigger: TGGATGTTCCTTTTCACATTTCCTTGTTGAAGGGCATGAACTGCGTGTCCAGGAAATTTGGGACTGTGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493005.5
ENST00000675747.1
CDS CCA 72 bp AATATTCTGCTGATTTTTCTTCACTCGTTCGATCTCTaGGCTATCTTTCACTGCAGTGCCAGCTCCCACTTC +
Preference number: 6 (lower is better)
Translates to: NILLIFLHSFDL*AIFHCSASSHF
Trigger: GAAGTGGGAGCTGGCACTGCAGTGAAAGATAGCCCAGAGATCGAACGAGTGAAGAAAAATCAGCAGAATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000493005.5
ENST00000675747.1
CDS CAA 90 bp AATTGCAGTTCCCCGTTGAAGTTCTCCCTTATATTTTACCCATCTTaGTGTCTGGGTGACCAGGACAATGCCCAGTACATTTGGGTACTT +
Preference number: 6 (lower is better)
Translates to: NCSSPLKFSLIFYPS*CLGDQDNAQYIWVL
Trigger: AAGTACCCAAATGTACTGGGCATTGTCCTGGTCACCCAGACACAAAGATGGGTAAAATATAAGGGAGAACTTCAACGGGGAACTGCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481592.5
ENST00000493005.5
CDS GCA 72 bp GTATTCTGCATTGCTTATGATCTTAGAGATCTGGGTTaGCATCTTGATGTCTGGTCGGTCAAGTTCTGCACT +
Preference number: 6 (lower is better)
Translates to: VFCIAYDLRDLG*HLDVWSVKFCT
Trigger: AGTGCAGAACTTGACCGACCAGACATCAAGATGGCAACCCAGATCTCTAAGATCATAAGCAATGCAGAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377119.5
ENST00000377122.9
ENST00000674540.1
ENST00000675747.1
CDS CCA 72 bp AGGATCGAAGACATCAGAAAGTTTGGGGAATATCTGTaGACTTCCCCTCTCCAAGAAAGTCCTGAATTCTGT +
Preference number: 6 (lower is better)
Translates to: RIEDIRKFGEYL*TSPLQESPEFC
Trigger: ACAGAATTCAGGACTTTCTTGGAGAGGGGAAGTCCACAGATATTCCCCAAACTTTCTGATGTCTTCGATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485750.1
CDS TCA 72 bp ACGTTACCCAACACATTAGAAAGGTATAAAAAGCAGTaGTCGTCAACAAAGTACATGGCCCCAGAGTCTGTG +
Preference number: 6 (lower is better)
Translates to: TLPNTLERYKKQ*SSTKYMAPESV
Trigger: CACAGACTCTGGGGCCATGTACTTTGTTGACGATCACTGCTTTTTATACCTTTCTAATGTGTTGGGTAACGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464278.1
CDS GCA 72 bp TTTCTTCACTCGTTCGATCTCTGGGCTATCTTTCACTaGAGTGCCAGCTCCCACTTCTTTCTTATAAAATAC +
Preference number: 6 (lower is better)
Translates to: FLHSFDLWAIFH*SASSHFFLIKY
Trigger: GTATTTTATAAGAAAGAAGTGGGAGCTGGCACTGCAGTGAAAGATAGCCCAGAGATCGAACGAGTGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000493005.5
ENST00000675747.1
CDS CCA 72 bp TCTTTGATTTCCTGTTTAAGCCCAGAATCTCTGCAGTaGTCTCAGCTAAGACCAAATGAGCAAGACTCCTTT +
Preference number: 6 (lower is better)
Translates to: SLISCLSPESLQ*SQLRPNEQDSF
Trigger: AAAGGAGTCTTGCTCATTTGGTCTTAGCTGAGACCACTGCAGAGATTCTGGGCTTAAACAGGAAATCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464278.1
CDS CAA 90 bp TACTACAAACGACCTACTACTAACCAGCCAGGAATACCCATGTCTTaGGTTCCATTCTCCAAACCATTCTTTGATTTCCTGTTTAAGCCC +
Preference number: 6 (lower is better)
Translates to: YYKRPTTNQPGIPMS*VPFSKPFFDFLFKP
Trigger: GGGCTTAAACAGGAAATCAAAGAATGGTTTGGAGAATGGAACCAAAGACATGGGTATTCCTGGCTGGTTAGTAGTAGGTCGTTTGTAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464278.1
CDS CCA 72 bp TATACTTTCTCTGGCTATAGATTTCAGATGTCCTCTTaGCTCGAAGGATATCTGGGATATCCATGCTCACTT +
Preference number: 6 (lower is better)
Translates to: YTFSGYRFQMSS*LEGYLGYPCSL
Trigger: AAGTGAGCATGGATATCCCAGATATCCTTCGAGCCAAGAGGACATCTGAAATCTATAGCCAGAGAAAGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000493005.5
ENST00000675747.1
CDS TCA 72 bp CTGAATTCTGTTCAATGCCCCCATTTTCTGATTTCTTaGAAAGTTTCTGGTCTACCTGTAAGCAGCATTACA +
Preference number: 6 (lower is better)
Translates to: LNSVQCPHFLIS*KVSGLPVSSIT
Trigger: TGTAATGCTGCTTACAGGTAGACCAGAAACTTTTCAAGAAATCAGAAAATGGGGGCATTGAACAGAATTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485750.1
CDS CCA 72 bp AGAAAGTTTAGAAGCTTCCACGGCATGTTCAAAATCTaGTCTTCCAATTACAGCGGGCTCTTTATTCATTAT +
Preference number: 6 (lower is better)
Translates to: RKFRSFHGMFKI*SSNYSGLFIHY
Trigger: ATAATGAATAAAGAGCCCGCTGTAATTGGAAGACCAGATTTTGAACATGCCGTGGAAGCTTCTAAACTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377119.5
ENST00000377122.9
ENST00000674540.1
ENST00000675747.1
CDS TCA 72 bp AGAGGCTCGCTTTGCTCTTTGGATATCAAGAACTTCTaGATTAAGTTCCATTCCTTTCCCTTTTATCTCATT +
Preference number: 6 (lower is better)
Translates to: RGSLCSLDIKNF*IKFHSFPFYLI
Trigger: AATGAGATAAAAGGGAAAGGAATGGAACTTAATTCAGAAGTTCTTGATATCCAAAGAGCAAAGCGAGCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000482754.1
ENST00000675747.1
CDS CAA 72 bp AATAAAGTCATTGTGGAATCATCACTAAAGCCTTACTaGACTAGAAAGTTTAGAAGCTTCCACGGCATGTTC +
Preference number: 6 (lower is better)
Translates to: NKVIVESSLKPY*TRKFRSFHGMF
Trigger: GAACATGCCGTGGAAGCTTCTAAACTTTCTAGTCAAGTAAGGCTTTAGTGATGATTCCACAATGACTTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377119.5
CDS CAA 90 bp AAATATCTGAATAAAGTCATTGTGGAATCATCACTAAAGCCTTACTaGACTAGAAAGTTTAGAAGCTTCCACGGCATGTTCAAAATCTGG +
Preference number: 6 (lower is better)
Translates to: KYLNKVIVESSLKPY*TRKFRSFHGMFKIW
Trigger: CCAGATTTTGAACATGCCGTGGAAGCTTCTAAACTTTCTAGTCAAGTAAGGCTTTAGTGATGATTCCACAATGACTTTATTCAGATATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377119.5
CDS CAA 72 bp TTGGTGATGTACTTTACATGTAAAAATTCTGGAGTCTaGTCTAAATCCAGTGATGACCTTCCTTTAATCTCC +
Preference number: 6 (lower is better)
Translates to: LVMYFTCKNSGV*SKSSDDLPLIS
Trigger: GGAGATTAAAGGAAGGTCATCACTGGATTTAGACAAGACTCCAGAATTTTTACATGTAAAGTACATCACCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377122.9
ENST00000482754.1
ENST00000675747.1