RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NEB (Homo sapiens)

Ensembl gene IDs: ENSG00000183091

Ensembl transcript IDs: ENST00000397337.6, ENST00000397345.8, ENST00000409198.5, ENST00000413693.5, ENST00000420924.1, ENST00000424585.1, ENST00000427231.7, ENST00000434685.5, ENST00000480784.1, ENST00000483418.1, ENST00000484968.1, ENST00000489048.1, ENST00000497809.1, ENST00000498015.2

Found 1967 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAACCGAAACATTGACTaGAGGATCTGTAAGTCCTGC +
Preference number: 2 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPNRNID*RICKSC
Trigger: GCAGGACTTACAGATCCTGCAGTCAATGTTTCGGTT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
3UTR-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAACCGAAACATTGACTaGAGGATCTGTAAGTCCTGC +
Preference number: 2 (lower is better)
Translates to: FKTQRRKDGTTINHIDTENRNID*RICKSC
Trigger: GCAGGACTTACAGATCCTGCAGTCAATGTTTCGGTT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGCTGGCTGTGCCAGTaGTGGCTGTGCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCWLCQ*WLCQSW
Trigger: CCAGCTCTGGCACAGCCAGCACTGGCACAGCCAGCA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCAGAGCTTCCGCAGGTaGCGGGAGCGGACCATGTCA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHQSFRR*RERTMS
Trigger: TGACATGGTCCGCTCCCGGCACCTGCGGAAGCTCTG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGGTCTGCCCCTGCTTaGCGGCCAAGACTGACACCA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGSAPA*RPRLTP
Trigger: TGGTGTCAGTCTTGGCCGCCAAGCAGGGGCAGACCC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTCGCCAGCAGGATCTaGGGCGTGTCAGGTACGGCA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFASRI*GVSGTA
Trigger: TGCCGTACCTGACACGCCTCAGATCCTGCTGGCGAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGCTGGCTGTGCCAGTaGTGGCTGTGCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCWLCQ*WLCQSW
Trigger: CCAGCTCTGGCACAGCCAGCACTGGCACAGCCAGCA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATACAAGGGTCTGCCCCTaGTTGGCGGCCAAGACTGAC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHTRVCP*LAAKTD
Trigger: GTCAGTCTTGGCCGCCAAGCAGGGGCAGACCCTTGT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCACTGACAAGGGTCTaGCCCTGCTTGGCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSLTRV*PCLAAK
Trigger: CTTGGCCGCCAAGCAGGGGCAGACCCTTGTCAGTGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACAGAGCTTCCGCAGGTaGCGGGAGCGGACCATGTCA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKQSFRR*RERTMS
Trigger: TGACATGGTCCGCTCCCGGCACCTGCGGAAGCTCTG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCCTCCAGGGACTCTATaGGCACCCAGCCGATCCCTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHPPGTL*APSRSL
Trigger: AAGGGATCGGCTGGGTGCCCATAGAGTCCCTGGAGG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCAGCCTGGATGGGGATaGCATCCAGCCGGACATCAC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHQPGWG*HPAGHH
Trigger: GTGATGTCCGGCTGGATGCCATCCCCATCCAGGCTG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTAGCCATAGGCCTTaGTGCCCTCCCACGCCCCTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCSHRP*CPPTPL
Trigger: AAGGGGCGTGGGAGGGCACCAAGGCCTATGGCTACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCCCGGCTCCGGCGCTaGGCTTGGACATTAATCATG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSRLRR*AWTLIM
Trigger: CATGATTAATGTCCAAGCTCAGCGCCGGAGCCGGGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGGCTGCCACCACACTaGGCATGTCCACCGGGGTGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPWLPPH*ACPPGC
Trigger: ACACCCCGGTGGACATGCTCAGTGTGGTGGCAGCCA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTGGTGGCCACTTCCTaGGACTTCTTGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLVATS*DFLAAT
Trigger: GGTGGCAGCCAAGAAGTCTCAGGAAGTGGCCACCAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGAGCTTGTCAGCTATaGGGGCCCAGCGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGACQL*GPSGSC
Trigger: ACAAGATCCGCTGGGCCCTCATAGCTGACAAGCTCC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGGAGCTTGTATGCATaGAGGGCCCGGTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHWSLYA*RARSRS
Trigger: GGATCTGGACCGGGCCCTTCATGCATACAAGCTCCA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGCTTTGCTGCAGGGATaGCTTGGCAGCCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHALLQG*LGSLEE
Trigger: TTCCTCCAGGCTGCCAAGTCATCCCTGCAGCAAAGC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCAGACACCAGGTTGCTaGCAGTCTTCGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHQTPGC*QSSPAG
Trigger: TCCTGCTGGCGAAGACTGTCAGCAACCTGGTGTCTG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTAACAAAGCTGGCGTaGCCTCCAGGCCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVTKLA*PPGQSG
Trigger: ACCTGACTGGCCTGGAGGTCACGCCAGCTTTGTTAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGGAGCATTCCGGTCCTaGCAGTCCTCTGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKGAFRS*QSSAQC
Trigger: GCACTGTGCAGAGGACTGGCAGGACCGGAATGCTCC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAACGTCACTCGCCGCCTaGCTGGCAGCTTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPTSLAA*LAALAA
Trigger: AGCTGCCAAAGCTGCCAGGCAGGCGGCGAGTGACGT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAACAAGGGTCTGCCCCTaGTTGGCGGCCAAGACTGAC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKTRVCP*LAAKTD
Trigger: GTCAGTCTTGGCCGCCAAGCAGGGGCAGACCCTTGT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCACTGACAAGGGTCTaGCCCTGCTTGGCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSLTRV*PCLAAK
Trigger: CTTGGCCGCCAAGCAGGGGCAGACCCTTGTCAGTGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACAGAGCTTCCGCAGGTaGCGGGAGCGGACCATGTCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPQSFRR*RERTMS
Trigger: TGACATGGTCCGCTCCCGGCACCTGCGGAAGCTCTG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTGGGCGACCGAGCATaGTTAAGCCATGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLGDRA*LSHGCL
Trigger: AAGGCAGCCATGGCTTAAGCATGCTCGGTCGCCCAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTTGAGATGTGCCGTTaGGTCTCCCTCACCCGTCTC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVEMCR*VSLTRL
Trigger: GAGACGGGTGAGGGAGACCCAACGGCACATCTCAAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGGCTGTGCCAGTGCTaGCTGTGCCAGAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHWLCQC*LCQSWF
Trigger: AAACCAGCTCTGGCACAGCCAGCACTGGCACAGCCA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTAGCCTGGATGAACTaGGGCAGGTCTGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLAWMN*GRSGGR
Trigger: CCTGCCACCAGACCTGCCCCAGTTCATCCAGGCTAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTCCGGGCCCCAATATaGTGGCCAAGCTGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFRAPI*WPSCLR
Trigger: CCGCAAACAGCTTGGCCACCATATTGGGGCCCGGAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGGTCTGCCCCTGCTTaGCGGCCAAGACTGACACCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGSAPA*RPRLTP
Trigger: TGGTGTCAGTCTTGGCCGCCAAGCAGGGGCAGACCC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTAGCCATAGGCCTTaGTGCCCTCCCACGCCCCTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCSHRP*CPPTPL
Trigger: AAGGGGCGTGGGAGGGCACCAAGGCCTATGGCTACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGAAGTCTATATCCAGTaGGCAGGGTGCGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHEVYIQ*AGCAGW
Trigger: CCAGCCTGCGCACCCTGCCCACTGGATATAGACTTC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCCTCACTGGCCTGTTTaGCTGCCTGTGTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHPHWPV*LPVWPS
Trigger: AGAAGGCCACACAGGCAGCCAAACAGGCCAGTGAGG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCTGCATCTCAGGAGTaGCAGGGGTTGCGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSASQE*QGLRWL
Trigger: AAGCCACCGCAACCCCTGTCACTCCTGAGATGCAGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCTCCTCACCCCCACTaGTGCTTAGTGCACTGGCAG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSPHPH*CLVHWQ
Trigger: CTGCCAGTGCACTAAGCATCAGTGGGGGTGAGGAGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACCACTTTCTTCCGGATaGCCTTCCTCCTCTCCACCG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKPLSSG*PSSSPP
Trigger: CGGTGGAGAGGAGGAAGGTCATCCGGAAGAAAGTGG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTAGGCAACATCACTaGGAGCTTTCTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCRQHH*ELSGPG
Trigger: CCCAGGCCCAGAAAGCTCTCAGTGATGTTGCCTACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGCGGCATGTTTGGCATaGTTGACGGACACGGAGTCA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHAACLA*LTDTES
Trigger: TGACTCCGTGTCCGTCAATCATGCCAAACATGCCGC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGGAGCTTGTATGCATaGAGGGCCCGGTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKWSLYA*RARSRS
Trigger: GGATCTGGACCGGGCCCTTCATGCATACAAGCTCCA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGCTTTGCTGCAGGGATaGCTTGGCAGCCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKALLQG*LGSLEE
Trigger: TTCCTCCAGGCTGCCAAGTCATCCCTGCAGCAAAGC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAAAGCTTGCAACCCTTaGGGAACTCCCGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHKACNP*GTPGPA
Trigger: AGCTGGACCGGGAGTTCCTCAAGGGTTGCAAGCTTT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTCGCCAGCAGGATCTaGGGCGTGTCAGGTACGGCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFASRI*GVSGTA
Trigger: TGCCGTACCTGACACGCCTCAGATCCTGCTGGCGAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTCACTTCCTTGACGTaGACAGTGTCCCGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVTSLT*TVSRVS
Trigger: AGAGACCCGGGACACTGTTCACGTCAAGGAAGTGAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCCTGTGTGGCCTTCTTaGTGTCTGGTCGATCAGCCA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHPVWPS*CLVDQP
Trigger: TGGCTGATCGACCAGACATCAAGAAGGCCACACAGG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTCCTGCCAGTCCTCTaGACAGTGCCATACATCCAG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVLPVL*TVPYIQ
Trigger: CTGGATGTATGGCACTGTGCAGAGGACTGGCAGGAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGAGCATTCCGGTCCTaGCAGTCCTCTGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGAFRS*QSSAQC
Trigger: GCACTGTGCAGAGGACTGGCAGGACCGGAATGCTCC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGCCAGTGCTGGCTGTaGCAGAGCTGGTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCQCWL*QSWFGS
Trigger: ACTTCCAAACCAGCTCTGGCACAGCCAGCACTGGCA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCCTGCTGCCTTCAGCTaGCTAAGCTGTGGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHPAAFS*LSCGFS
Trigger: AGAGAACCCACAGCTTAGGCAGCTGAAGGCAGCAGG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGCTGAGCCAACACCATaGCCATGGAATCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHAEPTP*PWNQAH
Trigger: GTGTGCCTGATTCCATGGGCATGGTGTTGGCTCAGC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCACTGACAAGGGTCTaGCCCTGCTTGGCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSLTRV*PCLAAK
Trigger: CTTGGCCGCCAAGCAGGGGCAGACCCTTGTCAGTGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGCCATAGGCCTTGGTaGCCTCCCACGCCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSHRPW*PPTPLY
Trigger: ATAAAGGGGCGTGGGAGGGCACCAAGGCCTATGGCT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCATGGCTGCCTTCCTTaGGGTGCTTGGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHHGCLP*GAWLCT
Trigger: AGTACAGAGCCAAGCACCGCAAGGAAGGCAGCCATG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTGGGCGACCGAGCATaGTTAAGCCATGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLGDRA*LSHGCL
Trigger: AAGGCAGCCATGGCTTAAGCATGCTCGGTCGCCCAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTTGAGATGTGCCGTTaGGTCTCCCTCACCCGTCTC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVEMCR*VSLTRL
Trigger: GAGACGGGTGAGGGAGACCCAACGGCACATCTCAAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTCAACGTAGTTGGCTaGGAGCATTCCGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFNVVG*EHSGPA
Trigger: GGCAGGACCGGAATGCTCCCAGCCAACTACGTTGAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCACTGAGAGCTTTCTaGGCCTGGGCAACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSLRAF*AWATLL
Trigger: GAGGAGAGTTGCCCAGGCCCAGAAAGCTCTCAGTGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACCTCCAGGGACTCTATaGGCACCCAGCCGATCCCTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPPPGTL*APSRSL
Trigger: AAGGGATCGGCTGGGTGCCCATAGAGTCCCTGGAGG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTATCCCGAGAGGCCTTaGCAGCCACAATGGGAATGG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHYPERP*QPQWEW
Trigger: CCATTCCCATTGTGGCTGCCAAGGCCTCTCGGGATA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGGCCAGCAGGATATCTaGGGTGTCTGGCATCACGTG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKGQQDI*GVWHHV
Trigger: CACGTGATGCCAGACACCCCAGATATCCTGCTGGCC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACAGCCTGGATGGGGATaGCATCCAGCCGGACATCAC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPQPGWG*HPAGHH
Trigger: GTGATGTCCGGCTGGATGCCATCCCCATCCAGGCTG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGAAGTCTATATCCAGTaGGCAGGGTGCGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKEVYIQ*AGCAGW
Trigger: CCAGCCTGCGCACCCTGCCCACTGGATATAGACTTC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGATGACTTGGCAGCCTaGAGGAAGTCCGGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKDDLAA*RKSGRS
Trigger: TGACCGACCGGACTTCCTCCAGGCTGCCAAGTCATC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACCTCACTGGCCTGTTTaGCTGCCTGTGTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKPHWPV*LPVWPS
Trigger: AGAAGGCCACACAGGCAGCCAAACAGGCCAGTGAGG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTACTCCACCTCACTaGCCTGTTTGGCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCTPPH*PVWLPV
Trigger: CACAGGCAGCCAAACAGGCCAGTGAGGTGGAGTACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTTCCTTGCGGTGCTTaGCTCTGTACTCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLPCGA*LCTPPH
Trigger: GTGAGGTGGAGTACAGAGCCAAGCACCGCAAGGAAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCCTGGCTGCTCAGCTTaGCTGCCTTCTTGGCCATTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHPGCSA*LPSWPF
Trigger: AAATGGCCAAGAAGGCAGCCAAGCTGAGCAGCCAGG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCTGCATCTCAGGAGTaGCAGGGGTTGCGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSASQE*QGLRWL
Trigger: AAGCCACCGCAACCCCTGTCACTCCTGAGATGCAGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCCCGGCTCCGGCGCTaGGCTTGGACATTAATCATG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSRLRR*AWTLIM
Trigger: CATGATTAATGTCCAAGCTCAGCGCCGGAGCCGGGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCTCCTCACCCCCACTaGTGCTTAGTGCACTGGCAG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSPHPH*CLVHWQ
Trigger: CTGCCAGTGCACTAAGCATCAGTGGGGGTGAGGAGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGCCAGAGGCGTGAATTaGGCTTGCTGTTCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKARGVN*ACCSAR
Trigger: TCTCGCTGAACAGCAAGCTCAATTCACGCCTCTGGC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGATCAGCCAGAGGCGTaGATTGAGCTTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHDQPEA*IELAVQ
Trigger: CTGAACAGCAAGCTCAATTCACGCCTCTGGCTGATC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCAGCTTTGGCAGCTCTaGTGGGAATCGCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHQLWQL*WESHQF
Trigger: GAACTGATGCGATTCCCATCAGAGCTGCCAAAGCTG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCCGGTGTGTCAGGCATaGCATGAATGGTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHPVCQA*HEWWSC
Trigger: ACAAGACCACCATTCATGTCATGCCTGACACACCGG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGGCTGCCACCACACTaGGCATGTCCACCGGGGTGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEWLPPH*ACPPGC
Trigger: ACACCCCGGTGGACATGCTCAGTGTGGTGGCAGCCA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTGGTGGCCACTTCCTaGGACTTCTTGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLVATS*DFLAAT
Trigger: GGTGGCAGCCAAGAAGTCTCAGGAAGTGGCCACCAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCGGGCGCCAATGTGGTaGCCCAACTGTTTACGATAT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRAPMW*PNCLRY
Trigger: ATATCGTAAACAGTTGGGTCACCACATTGGCGCCCG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGAGCTTGTCAGCTATaGGGGCCCAGCGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGACQL*GPSGSC
Trigger: ACAAGATCCGCTGGGCCCTCATAGCTGACAAGCTCC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGCGGCATGTTTGGCATaGTTGACGGACACGGAGTCA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKAACLA*LTDTES
Trigger: TGACTCCGTGTCCGTCAATCATGCCAAACATGCCGC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTTGGCGGCCAAGACTaGCACCATATCAGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLGGQD*HHISRY
Trigger: ATACCTGCTGATATGGTGTCAGTCTTGGCCGCCAAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGCTGTTTCCCACTTTTaGCAGCCTGCACGTAGACTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHAVSHF*QPARRL
Trigger: CAGTCTACGTGCAGGCTGTCAAAAGTGGGAAACAGC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACCTCTTGTGTCTTCTTaGCTTGGCGGATCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKPLVSS*LGGSQG
Trigger: CCCCTGAGATCCGCCAAGTCAAGAAGACACAAGAGG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGCTTTGCTGCAGGGATaGCTTGGCAGCCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPALLQG*LGSLEE
Trigger: TTCCTCCAGGCTGCCAAGTCATCCCTGCAGCAAAGC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAAAGCTTGCAACCCTTaGGGAACTCCCGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKKACNP*GTPGPA
Trigger: AGCTGGACCGGGAGTTCCTCAAGGGTTGCAAGCTTT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGCTTGGTCACTTCCTTaGCGTGAACAGTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPAWSLP*REQCPG
Trigger: CCCGGGACACTGTTCACGTCAAGGAAGTGACCAAGC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCCACTCTGCATCTGCTaGGACTCTTTGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHPLCIC*DSLAVM
Trigger: CATCACTGCCAAAGAGTCTCAGCAGATGCAGAGTGG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTAACAAAGCTGGCGTaGCCTCCAGGCCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVTKLA*PPGQSG
Trigger: ACCTGACTGGCCTGGAGGTCACGCCAGCTTTGTTAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCAGGCCTCTTCCTTTaGCTTCCAGTTCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSGLFL*LPVPGL
Trigger: GAGACCTGGAACTGGAAGTCAAAGGAAGAGGCCTGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTCACCGTTGAGATGTaGCGTTGGGTCTCCCTCACC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFTVEM*RWVSLT
Trigger: GGTGAGGGAGACCCAACGGCACATCTCAACGGTGAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGCTGGCTGTGCCAGTaGTGGCTGTGCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCWLCQ*WLCQSW
Trigger: CCAGCTCTGGCACAGCCAGCACTGGCACAGCCAGCA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACCTGCTGCCTTCAGCTaGCTAAGCTGTGGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKPAAFS*LSCGFS
Trigger: AGAGAACCCACAGCTTAGGCAGCTGAAGGCAGCAGG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAACGTCACTCGCCGCCTaGCTGGCAGCTTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKTSLAA*LAALAA
Trigger: AGCTGCCAAAGCTGCCAGGCAGGCGGCGAGTGACGT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGCTGAGCCAACACCATaGCCATGGAATCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKAEPTP*PWNQAH
Trigger: GTGTGCCTGATTCCATGGGCATGGTGTTGGCTCAGC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACACTTCCAGAGAACCTaGTGGACTCCAGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPHFQRT*WTPAKP
Trigger: GGGCTTGGCTGGAGTCCAGCAGGTTCTCTGGAAGTG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAGCCATAGGCCTTGGTaGCCTCCCACGCCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSHRPW*PPTPLY
Trigger: ATAAAGGGGCGTGGGAGGGCACCAAGGCCTATGGCT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAACTCGGAGGCACCGTaGTGTGTTCGGATCATCGTC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKNSEAP*CVRIIV
Trigger: GACGATGATCCGAACACAGCACGGTGCCTCCGAGTT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATCCAGTGGGCAGGGTaGGCAGGCTGGTTTTGTATA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHIQWAG*AGWFCI
Trigger: TATACAAAACCAGCCTGCGCACCCTGCCCACTGGAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACAGAGCTTCCGCAGGTaGCGGGAGCGGACCATGTCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKQSFRR*RERTMS
Trigger: TGACATGGTCCGCTCCCGGCACCTGCGGAAGCTCTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGAGCCCTGTGCCAAGTaGTTCTTGACATGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHEPCAK*FLTWSL
Trigger: CAAGGACCATGTCAAGAAGCACTTGGCACAGGGCTC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGCCCTTCCCACGGATaGTTTCCTCTAGATCTTTCC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGPSHG*FPLDLS
Trigger: GGAAAGATCTAGAGGAAAGCATCCGTGGGAAGGGCC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAACTGATCTGGTCGCCTaGGGTCTTAGCCAGCAGATG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKTDLVA*GLSQQM
Trigger: CATCTGCTGGCTAAGACCGCAGGCGACCAGATCAGT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTCAACGTAGTTGGCTaGGAGCATTCCGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFNVVG*EHSGPA
Trigger: GGCAGGACCGGAATGCTCCCAGCCAACTACGTTGAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGGCTGTGCCAGTGCTaGCTGTGCCAGAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPWLCQC*LCQSWF
Trigger: AAACCAGCTCTGGCACAGCCAGCACTGGCACAGCCA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCACTGAGAGCTTTCTaGGCCTGGGCAACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSLRAF*AWATLL
Trigger: GAGGAGAGTTGCCCAGGCCCAGAAAGCTCTCAGTGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGAACTGGGGCAGGTCTaGTGGCAGGTTGTATTTGTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHELGQV*WQVVFV
Trigger: CACAAATACAACCTGCCACCAGACCTGCCCCAGTTC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTAGCCTGGATGAACTaGGGCAGGTCTGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLAWMN*GRSGGR
Trigger: CCTGCCACCAGACCTGCCCCAGTTCATCCAGGCTAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTGCTGACCACATCCTaGGCTTTCTTAGCCGCCACG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLLTTS*AFLAAT
Trigger: CGTGGCGGCTAAGAAAGCCCAGGATGTGGTCAGCAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGCCTGGACCATAACTaGGGAGTCCACAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCLDHN*GVHNAG
Trigger: ACCAGCATTGTGGACTCCCCAGTTATGGTCCAGGCA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTGGTAGCGACATCCTaGGCCATCTTTGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLVATS*AIFAAV
Trigger: CACAGCTGCAAAGATGGCCCAGGATGTCGCTACCAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTGGTGATGTTGGCTTaGGCATCCTTTGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLVMLA*ASFAAV
Trigger: CACGGCTGCAAAGGATGCCCAAGCCAACATCACCAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATATCCCGAGAGGCCTTaGCAGCCACAATGGGAATGG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKYPERP*QPQWEW
Trigger: CCATTCCCATTGTGGCTGCCAAGGCCTCTCGGGATA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTCCGGGCCCCAATATaGTGGCCAAGCTGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFRAPI*WPSCLR
Trigger: CCGCAAACAGCTTGGCCACCATATTGGGGCCCGGAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCCTCTACAGAGCCAATaGGAACCCATCCTATGCCTC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHPLQSQ*EPILCL
Trigger: GAGGCATAGGATGGGTTCCCATTGGCTCTGTAGAGG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGCTGGTCTGCAGGCTaGCGATACTTCCTGTCACTC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSWSAG*RYFLSL
Trigger: GAGTGACAGGAAGTATCGCCAGCCTGCAGACCAGCT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGATATCTGGGGTGTCTaGCATCACGTGGATGGAGGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHDIWGV*HHVDGG
Trigger: ACCTCCATCCACGTGATGCCAGACACCCCAGATATC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCTTGGCCTTCCATTTaGCCCAGTCCAGCCGGTACT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSWPSI*PSPAGT
Trigger: AGTACCGGCTGGACTGGGCCAAATGGAAGGCCAAGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACAGGGCTCTGGATCTTaGCCTTCCATTTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKQGSGS*PSIWPS
Trigger: ACTGGGCCAAATGGAAGGCCAAGATCCAGAGCCCTG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGGTCTGCCCCTGCTTaGCGGCCAAGACTGACACCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGSAPA*RPRLTP
Trigger: TGGTGTCAGTCTTGGCCGCCAAGCAGGGGCAGACCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTCCACAGAATCCAGTaGGATCCAGCCAATGCCTCG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVHRIQ*DPANAS
Trigger: CGAGGCATTGGCTGGATCCCACTGGATTCTGTGGAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTGGCCAGATGCTTCTaGTTCTTGGCGTGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLARCF*FLACVR
Trigger: CCTGACACACGCCAAGAACCAGAAGCATCTGGCCAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGAAGTCTATATCCAGTaGGCAGGGTGCGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPEVYIQ*AGCAGW
Trigger: CCAGCCTGCGCACCCTGCCCACTGGATATAGACTTC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCCGGACGTGGACAAATaGAACATCTTTGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHPDVDK*NIFGAK
Trigger: CTTGGCCCCAAAGATGTTCCATTTGTCCACGTCCGG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCACTTGGGGTGTGTATaGCAGAGAGATCATGTGGCC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHHLGCV*QRDHVA
Trigger: GGCCACATGATCTCTCTGCCATACACACCCCAAGTG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCGGCAATGGATCACTTaGGGTGTGTATGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRQWIT*GVYGRE
Trigger: CTCTCTGCCATACACACCCCAAGTGATCCATTGCCG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGCTCTGATGAGGATTaGCGTATCTGGAACCGGAGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGSDED*RIWNRS
Trigger: ACTCCGGTTCCAGATACGCCAATCCTCATCAGAGCC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTGACTGCTCGGTGGTaGAAATGCTCTGGACGATCA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVTARW*KCSGRS
Trigger: TGATCGTCCAGAGCATTTCCACCACCGAGCAGTCAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCAGTGACTGCTCGGTaGTGGAAATGCTCTGGACGA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSVTAR*WKCSGR
Trigger: TCGTCCAGAGCATTTCCACCACCGAGCAGTCACTGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGACATGCAGCAACATaGGTGTGTCGTGGATTGTGG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGHAAT*VCRGLW
Trigger: CCACAATCCACGACACACCCATGTTGCTGCATGTCC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTGTCAGGTACGGCATaGCAGGTTCCTCTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVSGTA*QVPLSL
Trigger: CAAGGAAAGAGGAACCTGCCATGCCGTACCTGACAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACCTCACTGGCCTGTTTaGCTGCCTGTGTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPPHWPV*LPVWPS
Trigger: AGAAGGCCACACAGGCAGCCAAACAGGCCAGTGAGG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGCATGCTTAAGCCATaGCTGCCTTCCTTGCGGTGC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSMLKP*LPSLRC
Trigger: GCACCGCAAGGAAGGCAGCCATGGCTTAAGCATGCT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACCTGGCTGCTCAGCTTaGCTGCCTTCTTGGCCATTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKPGCSA*LPSWPF
Trigger: AAATGGCCAAGAAGGCAGCCAAGCTGAGCAGCCAGG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTGTCACCACTGGTGTaGAGCAACCCTTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLSPLV*SNPCVS
Trigger: AGAAACACAAGGGTTGCTTCACACCAGTGGTGACAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTGGTCTGGTGCTTCTaGATGCTCAGACTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVVWCF*MLRLLL
Trigger: GAGGAGAAGTCTGAGCATTCAGAAGCACCAGACCAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCCAGCAGTAGATGGATaGGATGGGATGGAAGATACC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHPAVDG*DGMEDT
Trigger: GGTATCTTCCATCCCATCTCATCCATCTACTGCTGG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGGCATCTCCATCCTTaGAGGACACCTCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHWHLHP*RTPHLH
Trigger: ATGCAGATGAGGTGTCCTTCAAGGATGGAGATGCCA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGGGGTCATGAACTTTaGAGGATCCACTTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGGHEL*RIHFLP
Trigger: CGGAAGAAAGTGGATCCTTCAAAGTTCATGACCCCC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGATCAGCCAGAGGCGTaGATTGAGCTTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKDQPEA*IELAVQ
Trigger: CTGAACAGCAAGCTCAATTCACGCCTCTGGCTGATC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGAACAGTATCGAGCTTaGATTTGGGGGTCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHEQYRA*IWGSRS
Trigger: ACTGCGAGACCCCCAAATTCAAGCTCGATACTGTTC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGCTTTGTGTTATGCTaGGCCAACACCATGCCCATG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCFVLC*ANTMPM
Trigger: CATGGGCATGGTGTTGGCTCAGCATAACACAAAGCA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTGCAGCTGTCACACTaGCCATATCCAGAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLQLSH*PYPEVC
Trigger: ACACACCTCTGGATATGGTCAGTGTGACAGCTGCAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTCCATGGCGTAAGTaGACTTCAGCTTCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCPWRK*TSASRG
Trigger: ACCCCGAGAAGCTGAAGTTCACTTACGCCATGGACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTGTCAGGCATGACATaGATGGTGGTCTTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVSGMT*MVVLSL
Trigger: CAAGGACAAGACCACCATTCATGTCATGCCTGACAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTTGTATTCCCGGTCTaGCTGCATCTTGGCCACTTG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLVFPV*LHLGHL
Trigger: CAAGTGGCCAAGATGCAGTCAGACCGGGAATACAAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCACTAACCAACTCCTaGCACTTCTTGGCCAGTACC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSLTNS*HFLAST
Trigger: GGTACTGGCCAAGAAGTGTCAGGAGTTGGTTAGTGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACCTTCCGAGCCTGAATaGCGTCATTCTGATCAGGCA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKPSEPE*RHSDQA
Trigger: TGCCTGATCAGAATGACGTCATTCAGGCTCGGAAGG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGCGGCATGTTTGGCATaGTTGACGGACACGGAGTCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPAACLA*LTDTES
Trigger: TGACTCCGTGTCCGTCAATCATGCCAAACATGCCGC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGATACTCCAGGTCACTaGGGATGTACTGGCACCTTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHDTPGH*GCTGTF
Trigger: AAAGGTGCCAGTACATCCTCAGTGACCTGGAGTATC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACCTCTTGTGTCTTCTTaGCTTGGCGGATCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPPLVSS*LGGSQG
Trigger: CCCCTGAGATCCGCCAAGTCAAGAAGACACAAGAGG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCGTCCTTGGCTGCTTTaGTATGAACAGCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRPWLL*YEQHLA
Trigger: AGCCAGATGCTGTTCATATCAAAGCAGCCAAGGACG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGTCCAGATTGGTGTTaGCTTTGTAGGCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSPDWC*LCRRPW
Trigger: CCAAGGACGCCTACAAAGTCAACACCAATCTGGACT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTCGCCAGCAGGATCTaGGGCGTGTCAGGTACGGCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFASRI*GVSGTA
Trigger: TGCCGTACCTGACACGCCTCAGATCCTGCTGGCGAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTCACTTCCTTGACGTaGACAGTGTCCCGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVTSLT*TVSRVS
Trigger: AGAGACCCGGGACACTGTTCACGTCAAGGAAGTGAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTGGTGGCTCCAGCATaGTGGAGTAGTTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLVAPA*WSSWIF
Trigger: GAAAATCCAACTACTCCATCATGCTGGAGCCACCAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCAGGCCTCTTCCTTTaGCTTCCAGTTCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSGLFL*LPVPGL
Trigger: GAGACCTGGAACTGGAAGTCAAAGGAAGAGGCCTGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTCCTGTATTTGATCTaGCTGATCTGGTCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFLYLI*LIWSPA
Trigger: CGCAGGCGACCAGATCAGTCAGATCAAATACAGGAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAGGAGTGACAGGGGTTaGGGTGGCTTTCCCCACATT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRSDRG*GGFPHI
Trigger: AATGTGGGGAAAGCCACCGCAACCCCTGTCACTCCT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTCACCGTTGAGATGTaGCGTTGGGTCTCCCTCACC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFTVEM*RWVSLT
Trigger: GGTGAGGGAGACCCAACGGCACATCTCAACGGTGAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTCCTGCCAGTCCTCTaGACAGTGCCATACATCCAG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVLPVL*TVPYIQ
Trigger: CTGGATGTATGGCACTGTGCAGAGGACTGGCAGGAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGAGCATTCCGGTCCTaGCAGTCCTCTGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGAFRS*QSSAQC
Trigger: GCACTGTGCAGAGGACTGGCAGGACCGGAATGCTCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGCCAGTGCTGGCTGTaGCAGAGCTGGTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPCQCWL*QSWFGS
Trigger: ACTTCCAAACCAGCTCTGGCACAGCCAGCACTGGCA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCTCGATGCCTTGGCTaGAGTGATGGGAATAGCATC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSRCLG*SDGNSI
Trigger: GATGCTATTCCCATCACTGCAGCCAAGGCATCGAGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGGCAATGTTTCTCGATaGCTTGGCTGCAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKGNVSR*LGCSDG
Trigger: CCCATCACTGCAGCCAAGGCATCGAGAAACATTGCC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTCAGCTTCTCGGGGTaGTGGCGATACTTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFSFSG*WRYFFS
Trigger: TGAGAAGAAGTATCGCCAGCACCCCGAGAAGCTGAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGCTTGGGCATCCTTTaGAGCCGTGACACTGAGCAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGLGIL*SRDTEH
Trigger: ATGCTCAGTGTCACGGCTGCAAAGGATGCCCAAGCC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCTTGGCCAGCAAGATaGTTAACATGTCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSWPAR*LTCPLG
Trigger: GCCCAGTGGACATGTTAAGCATCTTGCTGGCCAAGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAACAAGGGTCTGCCCCTaGTTGGCGGCCAAGACTGAC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTETRVCP*LAAKTD
Trigger: GTCAGTCTTGGCCGCCAAGCAGGGGCAGACCCTTGT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCACTGACAAGGGTCTaGCCCTGCTTGGCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESLTRV*PCLAAK
Trigger: CTTGGCCGCCAAGCAGGGGCAGACCCTTGTCAGTGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAACTCGGAGGCACCGTaGTGTGTTCGGATCATCGTC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPNSEAP*CVRIIV
Trigger: GACGATGATCCGAACACAGCACGGTGCCTCCGAGTT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTTCTGCTTCTTGCCTaGAGCTCTGTAGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLLLLA*SSVDQL
Trigger: GAGCTGGTCTACAGAGCTGCAGGCAAGAAGCAGAAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGCTCGGTGGTGGAAATaGTCTGGACGATCAGGAATG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKARWWK*SGRSGM
Trigger: CATTCCTGATCGTCCAGAGCATTTCCACCACCGAGC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGACTGTGTCAGTGACTaGTCGGTGGTGGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKDCVSD*SVVEML
Trigger: GAGCATTTCCACCACCGAGCAGTCACTGACACAGTC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTAACCTTGCGGACATaGAGCAACATGGGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLTLRT*SNMGVS
Trigger: CGACACACCCATGTTGCTGCATGTCCGCAAGGTTAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCAAAATCGCTTTGCTaGAGGGATGACTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSKSLC*RDDLAA
Trigger: GGCTGCCAAGTCATCCCTGCAGCAAAGCGATTTTGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGCTGCTCAGCTTGGCTaGCTTCTTGGCCATTTCTAT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHAAQLG*LLGHFY
Trigger: ATAGAAATGGCCAAGAAGGCAGCCAAGCTGAGCAGC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGGCCCTTCCCACGGATaGTTTCCTCTAGATCTTTCC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKGPSHG*FPLDLS
Trigger: GGAAAGATCTAGAGGAAAGCATCCGTGGGAAGGGCC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAACTGATCTGGTCGCCTaGGGTCTTAGCCAGCAGATG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPTDLVA*GLSQQM
Trigger: CATCTGCTGGCTAAGACCGCAGGCGACCAGATCAGT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGGCAGGTCAGGGATTaGAGTTCCTTGTCCTATTGC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRQVRD*SSLSYC
Trigger: GCAATAGGACAAGGAACTCCAATCCCTGACCTGCCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCTCTGGAGTCACAGTaGTTGGAATGCCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSLESQ*LECLFP
Trigger: TGGGAACAGGCATTCCAACCACTGTGACTCCAGAGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGGATCTGTCACCACTaGTGTGAAGCAACCCTTGTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRICHH*CEATLV
Trigger: CACAAGGGTTGCTTCACACCAGTGGTGACAGATCCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTGGGGCAGGTCTGGTaGCAGGTTGTATTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLGQVW*QVVFVN
Trigger: ATTCACAAATACAACCTGCCACCAGACCTGCCCCAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTGCTGACCACATCCTaGGCTTTCTTAGCCGCCACG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLLTTS*AFLAAT
Trigger: CGTGGCGGCTAAGAAAGCCCAGGATGTGGTCAGCAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTGTTCTGTTTTGCCTaGACCATAACTGGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVFCFA*TITGES
Trigger: GGACTCCCCAGTTATGGTCCAGGCAAAACAGAACAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTGGTAGCGACATCCTaGGCCATCTTTGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLVATS*AIFAAV
Trigger: CACAGCTGCAAAGATGGCCCAGGATGTCGCTACCAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGAGGTGTGTGGTACTTaGTCTTGCTGGCTTCATAGC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHEVCGT*SCWLHS
Trigger: GCTATGAAGCCAGCAAGACCAAGTACCACACACCTC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATGACTGTCTGTAGTTaGCGTTGGTGGCAACCTCCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHMTVCS*RWWQPP
Trigger: AGGAGGTTGCCACCAACGCCAACTACAGACAGTCAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCTGCATGGCATTCCTaGAGTGCTCCACATTCAAGG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSAWHS*SAPHSR
Trigger: CCTTGAATGTGGAGCACTCCAGGAATGCCATGCAGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCTCCAGGGACTCTATaGGCACCCAGCCGATCCCTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKPPGTL*APSRSL
Trigger: AAGGGATCGGCTGGGTGCCCATAGAGTCCCTGGAGG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGCTTCTCGGGGTGCTaGCGATACTTCTTCTCACTA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSFSGC*RYFFSL
Trigger: TAGTGAGAAGAAGTATCGCCAGCACCCCGAGAAGCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTGGTGATGTTGGCTTaGGCATCCTTTGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLVMLA*ASFAAV
Trigger: CACGGCTGCAAAGGATGCCCAAGCCAACATCACCAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTCAGCTTCTTAAACTaGAAGTTGCTCGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVSFLN*KLLGCW
Trigger: CCAGCACCCGAGCAACTTCCAGTTTAAGAAGCTGAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGGACCACATTATCTTaGGGTCATCGTGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGTTLS*GHRVLL
Trigger: GAGCAGTACACGATGACCCCAAGATAATGTGGTCCC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTTGGCTGCTTGGATTaGAATGGCATCCAGACGCAA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLGCLD*NGIQTQ
Trigger: TTGCGTCTGGATGCCATTCCAATCCAAGCAGCCAAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCATGTGAATTTGAGCTaGTCTGCAGGCTGGCGATAC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHHVNLS*SAGWRY
Trigger: GTATCGCCAGCCTGCAGACCAGCTCAAATTCACATG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTATTTGTAGTCACTaGCGATGTCCCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCICSH*RCPWRP
Trigger: AGGCCTCCAGGGACATCGCCAGTGACTACAAATACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAACTTCAGGAGACCCTTaGGGCATCCAGCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPTSGDP*GIQPMP
Trigger: TGGCATTGGCTGGATGCCCCAAGGGTCTCCTGAAGT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCTTGGCCTTCCATTTaGCCCAGTCCAGCCGGTACT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSWPSI*PSPAGT
Trigger: AGTACCGGCTGGACTGGGCCAAATGGAAGGCCAAGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTCCACAGAATCCAGTaGGATCCAGCCAATGCCTCG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVHRIQ*DPANAS
Trigger: CGAGGCATTGGCTGGATCCCACTGGATTCTGTGGAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGTAGCCATAGGCCTTaGTGCCCTCCCACGCCCCTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCSHRP*CPPTPL
Trigger: AAGGGGCGTGGGAGGGCACCAAGGCCTATGGCTACA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGTAGCCATAGGCCTTaGTGCCCTCCCACGCCCCTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECSHRP*CPPTPL
Trigger: AAGGGGCGTGGGAGGGCACCAAGGCCTATGGCTACA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGCAGGATGTAGCTGGTaGCTTTCACTCTATCCCAGG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKAGCSW*LSLYPR
Trigger: CCTGGGATAGAGTGAAAGCCACCAGCTACATCCTGC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAACTTGCAAGTCGGGGTaGCAAATCCATTCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKTCKSG*QIHSWR
Trigger: CCTCCACGAATGGATTTGCCACCCCGACTTGCAAGT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCACGGTTTTGGTAGTTaGAGCCACTTTGCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHHGFGS*SHFASD
Trigger: GTCAGAGGCAAAGTGGCTCCAACTACCAAAACCGTG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGCAGGGTGCGCAGGCTaGTTTTGTATAGATTCGAAC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHAGCAG*FCIDSN
Trigger: GTTCGAATCTATACAAAACCAGCCTGCGCACCCTGC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACCGGACGTGGACAAATaGAACATCTTTGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKPDVDK*NIFGAK
Trigger: CTTGGCCCCAAAGATGTTCCATTTGTCCACGTCCGG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTGTCTTCTTGACTTaGCGGATCTCAGGGGTATCG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCVFLT*RISGVS
Trigger: CGATACCCCTGAGATCCGCCAAGTCAAGAAGACACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGAGGATTGGCGTATCTaGAACCGGAGTGTACTTGTC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHEDWRI*NRSVLV
Trigger: GACAAGTACACTCCGGTTCCAGATACGCCAATCCTC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCAGTGACTGCTCGGTaGTGGAAATGCTCTGGACGA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSVTAR*WKCSGR
Trigger: TCGTCCAGAGCATTTCCACCACCGAGCAGTCACTGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGGAGTCCACTTCCAGTaGGCTTTGTTGGCTTCGTAC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKGVHFQ*ALLASY
Trigger: GTACGAAGCCAACAAAGCCCACTGGAAGTGGACTCC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTGTCAGGTACGGCATaGCAGGTTCCTCTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVSGTA*QVPLSL
Trigger: CAAGGAAAGAGGAACCTGCCATGCCGTACCTGACAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGCATGTTTCACCTCTaGTGGCTCCAGCATGATGGA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSMFHL*WLQHDG
Trigger: TCCATCATGCTGGAGCCACCAGAGGTGAAACATGCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGTACTCCACCTCACTaGCCTGTTTGGCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPCTPPH*PVWLPV
Trigger: CACAGGCAGCCAAACAGGCCAGTGAGGTGGAGTACA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTTCCTTGCGGTGCTTaGCTCTGTACTCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLPCGA*LCTPPH
Trigger: GTGAGGTGGAGTACAGAGCCAAGCACCGCAAGGAAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAGCATGCTTAAGCCATaGCTGCCTTCCTTGCGGTGC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSMLKP*LPSLRC
Trigger: GCACCGCAAGGAAGGCAGCCATGGCTTAAGCATGCT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAATCCGGAGTTTCATTaGCCATGGCATTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHNPEFH*PWHSGL
Trigger: GAGGCCTGAATGCCATGGCCAATGAAACTCCGGATT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCTGCATCTCAGGAGTaGCAGGGGTTGCGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESASQE*QGLRWL
Trigger: AAGCCACCGCAACCCCTGTCACTCCTGAGATGCAGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTGTCACCACTGGTGTaGAGCAACCCTTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLSPLV*SNPCVS
Trigger: AGAAACACAAGGGTTGCTTCACACCAGTGGTGACAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCCCGGCTCCGGCGCTaGGCTTGGACATTAATCATG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESRLRR*AWTLIM
Trigger: CATGATTAATGTCCAAGCTCAGCGCCGGAGCCGGGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCTCCTCACCCCCACTaGTGCTTAGTGCACTGGCAG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESPHPH*CLVHWQ
Trigger: CTGCCAGTGCACTAAGCATCAGTGGGGGTGAGGAGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCTCCTCACCCCCACTaGTGCTTAGTGCACTGGCAG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSPHPH*CLVHWQ
Trigger: CTGCCAGTGCACTAAGCATCAGTGGGGGTGAGGAGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTGGTCTGGTGCTTCTaGATGCTCAGACTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVVWCF*MLRLLL
Trigger: GAGGAGAAGTCTGAGCATTCAGAAGCACCAGACCAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACCAGCAGTAGATGGATaGGATGGGATGGAAGATACC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKPAVDG*DGMEDT
Trigger: GGTATCTTCCATCCCATCTCATCCATCTACTGCTGG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGGCATCTCCATCCTTaGAGGACACCTCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKWHLHP*RTPHLH
Trigger: ATGCAGATGAGGTGTCCTTCAAGGATGGAGATGCCA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTTTCTTCCGGATaGCCTTCCTCCTCTCCACCG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKPLSSG*PSSSPP
Trigger: CGGTGGAGAGGAGGAAGGTCATCCGGAAGAAAGTGG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACCACTTTCTTCCGGATaGCCTTCCTCCTCTCCACCG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEPLSSG*PSSSPP
Trigger: CGGTGGAGAGGAGGAAGGTCATCCGGAAGAAAGTGG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGATCAGCCAGAGGCGTaGATTGAGCTTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPDQPEA*IELAVQ
Trigger: CTGAACAGCAAGCTCAATTCACGCCTCTGGCTGATC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTCATTGAGGATGTCTaGAGCTCGCTTTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLIEDV*SSLCLF
Trigger: GAAAAGGCAAAGCGAGCTTCAGACATCCTCAATGAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACAGCTTTGGCAGCTCTaGTGGGAATCGCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPQLWQL*WESHQF
Trigger: GAACTGATGCGATTCCCATCAGAGCTGCCAAAGCTG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGTGTAGTGGTGGTATaGCTGTCTGTAGTTGGCGTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSVVVV*LSVVGV
Trigger: AACGCCAACTACAGACAGTCATACCACCACTACACT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTTGTATTCCCGGTCTaGCTGCATCTTGGCCACTTG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLVFPV*LHLGHL
Trigger: CAAGTGGCCAAGATGCAGTCAGACCGGGAATACAAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTGGTGGCCACTTCCTaGGACTTCTTGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELVATS*DFLAAT
Trigger: GGTGGCAGCCAAGAAGTCTCAGGAAGTGGCCACCAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGCACAACATCGTTCTaGTCAGGCAGACATGTCCAC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCTTSF*SGRHVH
Trigger: GTGGACATGTCTGCCTGATCAGAACGATGTTGTGCA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACGGGCGCCAATGTGGTaGCCCAACTGTTTACGATAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRAPMW*PNCLRY
Trigger: ATATCGTAAACAGTTGGGTCACCACATTGGCGCCCG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACCTTCCGAGCCTGAATaGCGTCATTCTGATCAGGCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPPSEPE*RHSDQA
Trigger: TGCCTGATCAGAATGACGTCATTCAGGCTCGGAAGG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGTAATCCATGTCACTaGCCAGAGCCTGGGAATTTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGNPCH*PEPGNF
Trigger: AAAATTCCCAGGCTCTGGTCAGTGACATGGATTACC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCATGTTTGGCATGATTaGCGGACACGGAGTCATTTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHHVWHD*RTRSHL
Trigger: CAAATGACTCCGTGTCCGTCAATCATGCCAAACATG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTGAGGGTGTACTTTaGTTTGGTGGCATTCCAGTC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCEGVL*FGGIPV
Trigger: GACTGGAATGCCACCAAATCAAAGTACACCCTCACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTTGGCGGCCAAGACTaGCACCATATCAGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLGGQD*HHISRY
Trigger: ATACCTGCTGATATGGTGTCAGTCTTGGCCGCCAAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCGTTCTGGTCAGGATaGCACATCCATTGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSFWSG*HIHWCK
Trigger: CTTGCACCAATGGATGTGTCATCCTGACCAGAACGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGGAAATCCAGACAGTaGACCACACCAGGGAATTCA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHWKSRQ*TTPGNS
Trigger: TGAATTCCCTGGTGTGGTTCACTGTCTGGATTTCCA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGCTGTTTCCCACTTTTaGCAGCCTGCACGTAGACTG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPAVSHF*QPARRL
Trigger: CAGTCTACGTGCAGGCTGTCAAAAGTGGGAAACAGC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGAGCCACTTTGCCTCTaGCACTGTGCACATAGTCAT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKEPLCL*HCAHSH
Trigger: ATGACTATGTGCACAGTGTCAGAGGCAAAGTGGCTC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGGAGCTTGTATGCATaGAGGGCCCGGTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKWSLYA*RARSRS
Trigger: GGATCTGGACCGGGCCCTTCATGCATACAAGCTCCA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGTCCAGATTGGTGTTaGCTTTGTAGGCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSPDWC*LCRRPW
Trigger: CCAAGGACGCCTACAAAGTCAACACCAATCTGGACT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCTTTGCTGCAGGGATaGCTTGGCAGCCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEALLQG*LGSLEE
Trigger: TTCCTCCAGGCTGCCAAGTCATCCCTGCAGCAAAGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACAGACACCAGGTTGCTaGCAGTCTTCGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKQTPGC*QSSPAG
Trigger: TCCTGCTGGCGAAGACTGTCAGCAACCTGGTGTCTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTGCCAAGTGCTTCTTaGCATGGTCCTTGTACTTGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVPSAS*HGPCTC
Trigger: ACAAGTACAAGGACCATGTCAAGAAGCACTTGGCAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCTTGGTCACTTCCTTaGCGTGAACAGTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEAWSLP*REQCPG
Trigger: CCCGGGACACTGTTCACGTCAAGGAAGTGACCAAGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGCTTGGTCACTTCCTTaGCGTGAACAGTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKAWSLP*REQCPG
Trigger: CCCGGGACACTGTTCACGTCAAGGAAGTGACCAAGC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTGGTGGCTCCAGCATaGTGGAGTAGTTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLVAPA*WSSWIF
Trigger: GAAAATCCAACTACTCCATCATGCTGGAGCCACCAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCAGTCACGGGTTTGTaGAGTTTCTTCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSVTGL*SFFRSA
Trigger: GGCTGACCTGAAGAAACTTCACAAACCCGTGACTGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTGGCCTCTTTTAGGTaGAGCTGCTCCAGATTATCG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVASFR*SCSRLS
Trigger: CGATAATCTGGAGCAGCTTCACCTAAAAGAGGCCAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTAACAAAGCTGGCGTaGCCTCCAGGCCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVTKLA*PPGQSG
Trigger: ACCTGACTGGCCTGGAGGTCACGCCAGCTTTGTTAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTCCTGTATTTGATCTaGCTGATCTGGTCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFLYLI*LIWSPA
Trigger: CGCAGGCGACCAGATCAGTCAGATCAAATACAGGAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGAGCTAATGTGCTTCTaGGTCTCCTTCACACGTTTC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHELMCF*VSFTRF
Trigger: GAAACGTGTGAAGGAGACGCAGAAGCACATTAGCTC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAAAGGGTGTGGGGGTTaGTTTCCCCAGGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKKGCGG*FPQVLF
Trigger: AAAGAGAACCTGGGGAAAGCAACCCCCACACCCTTT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCTGGTGCTTCTGAATaGTCAGACTTCTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSGASE*SDFSSP
Trigger: GGGTGAGGAGAAGTCTGAGCATTCAGAAGCACCAGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGAAGGACACCTCATCTaGATCAGCAGCCATATAGTC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHEGHLI*ISSHIV
Trigger: GACTATATGGCTGCTGATGCAGATGAGGTGTCCTTC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTGGAGTATCTGTTGTaGTGGCGTATGGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLEYLL*WRMAVL
Trigger: AAGGACAGCCATACGCCAGCACAACAGATACTCCAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTTCGTGTTCTGTTTTaGCTGGACCATAACTGGGGA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLRVLF*LDHNWG
Trigger: TCCCCAGTTATGGTCCAGGCAAAACAGAACACGAAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTCAGCTTCTCGGGGTaGTGGCGATACTTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFSFSG*WRYFFS
Trigger: TGAGAAGAAGTATCGCCAGCACCCCGAGAAGCTGAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCTTGCAGCCTTTATTaGAATGGCATCAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSCSLY*NGIRPQ
Trigger: CTGAGGCCTGATGCCATTGCAATAAAGGCTGCAAGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTCTCTAGAGGCTCTTaGAGCCTTTATTGCAATGGC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVSRGS*SLYCNG
Trigger: GCCATTGCAATAAAGGCTGCAAGAGCCTCTAGAGAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATATTCCCGGTCTGACTaGATCTTGGCCACTTGCATG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKYSRSD*ILATCM
Trigger: CATGCAAGTGGCCAAGATGCAGTCAGACCGGGAATA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACACTTCCAGAGAACCTaGTGGACTCCAGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKHFQRT*WTPAKP
Trigger: GGGCTTGGCTGGAGTCCAGCAGGTTCTCTGGAAGTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATGGTATGTGCATTCTaGTTGGCAAGCACCATGTCC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHMVCAF*LASTMS
Trigger: GGACATGGTGCTTGCCAAGCAGAATGCACATACCAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTCCCGGGAGGCTTTTaGTGCTTTGATTGGTATGGC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFPGGF*CFDWYG
Trigger: GCCATACCAATCAAAGCAGCAAAAGCCTCCCGGGAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCGGAACCCAGCCAATaGCTTTCATCCATTCAAGGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSEPSQ*LSSIQG
Trigger: ACCTTGAATGGATGAAAGGCATTGGCTGGGTTCCGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGAATTTGAGCTGGTCTaGAGGCTGGCGATACTTCCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKEFELV*RLAILP
Trigger: AGGAAGTATCGCCAGCCTGCAGACCAGCTCAAATTC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCTTGGCCAGCAAGATaGTTAACATGTCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSWPAR*LTCPLG
Trigger: GCCCAGTGGACATGTTAAGCATCTTGCTGGCCAAGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCGTTTTGATCCGGCATaGATGTCCATTCATGCAGGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRFDPA*MSIHAG
Trigger: ACCTGCATGAATGGACATGCATGCCGGATCAAAACG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGCCATAGGCCTTGGTaGCCTCCCACGCCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESHRPW*PPTPLY
Trigger: ATAAAGGGGCGTGGGAGGGCACCAAGGCCTATGGCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTCACCAGATCAGCATaGTTGGCTCCAACAATGGGA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFTRSA*LAPTMG
Trigger: TCCCATTGTTGGAGCCAAGCATGCTGATCTGGTGAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATATGGCTGGCCAGATaGTTCTGGTTCTTGGCGTGT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKIWLAR*FWFLAC
Trigger: ACACGCCAAGAACCAGAAGCATCTGGCCAGCCATAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATCCAGTGGGCAGGGTaGGCAGGCTGGTTTTGTATA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPIQWAG*AGWFCI
Trigger: TATACAAAACCAGCCTGCGCACCCTGCCCACTGGAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTGACTTCTGCTTCTTaGCTGCAGCTCTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLTSAS*LQLCRP
Trigger: TGGTCTACAGAGCTGCAGGCAAGAAGCAGAAGTCAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGACTGTGTCAGTGACTaGTCGGTGGTGGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPDCVSD*SVVEML
Trigger: GAGCATTTCCACCACCGAGCAGTCACTGACACAGTC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTAGGCGTCCTTGGCTaGTTTGATATGAACAGCATC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVGVLG*FDMNSI
Trigger: GATGCTGTTCATATCAAAGCAGCCAAGGACGCCTAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCAAAATCGCTTTGCTaGAGGGATGACTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSKSLC*RDDLAA
Trigger: GGCTGCCAAGTCATCCCTGCAGCAAAGCGATTTTGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGAGCCCTGTGCCAAGTaGTTCTTGACATGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPEPCAK*FLTWSL
Trigger: CAAGGACCATGTCAAGAAGCACTTGGCACAGGGCTC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACTGGGCGACCGAGCATaGTTAAGCCATGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELGDRA*LSHGCL
Trigger: AAGGCAGCCATGGCTTAAGCATGCTCGGTCGCCCAG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCTCTGGAGTCACAGTaGTTGGAATGCCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSLESQ*LECLFP
Trigger: TGGGAACAGGCATTCCAACCACTGTGACTCCAGAGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTTGAGATGTGCCGTTaGGTCTCCCTCACCCGTCTC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVEMCR*VSLTRL
Trigger: GAGACGGGTGAGGGAGACCCAACGGCACATCTCAAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGGATCTGTCACCACTaGTGTGAAGCAACCCTTGTG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKRICHH*CEATLV
Trigger: CACAAGGGTTGCTTCACACCAGTGGTGACAGATCCT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTAAGCTTCGGGACTaGATGTTGTCTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCKLRD*MLSSAG
Trigger: TCCAGCAGAAGACAACATCCAGTCCCGAAGCTTACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGGCTGTGCCAGTGCTaGCTGTGCCAGAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEWLCQC*LCQSWF
Trigger: AAACCAGCTCTGGCACAGCCAGCACTGGCACAGCCA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGATTCTGCGAAGTTCTaGAGTATCTGTTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHDSAKF*SICCAG
Trigger: GCCAGCACAACAGATACTCCAGAACTTCGCAGAATC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGCCTGGACCATAACTaGGGAGTCCACAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPCLDHN*GVHNAG
Trigger: ACCAGCATTGTGGACTCCCCAGTTATGGTCCAGGCA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGAACTTGACGGTATCTaGGTGCTGTCGATACTTCCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHELDGI*VLSILP
Trigger: AGGAAGTATCGACAGCACCCAGATACCGTCAAGTTC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATATCCAGAGGTGTGTaGTACTTGGTCTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHISRGV*YLVLLA
Trigger: AGCCAGCAAGACCAAGTACCACACACCTCTGGATAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATGACTGTCTGTAGTTaGCGTTGGTGGCAACCTCCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKMTVCS*RWWQPP
Trigger: AGGAGGTTGCCACCAACGCCAACTACAGACAGTCAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATGTCCACCGGGGTGTaGAAGGAGGTCTTGGATTTC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPMSTGV*KEVLDF
Trigger: GAAATCCAAGACCTCCTTCCACACCCCGGTGGACAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCACGTTCCTGTAGTTaGCATTGGTGGCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSRSCS*HWWPLP
Trigger: AGGAAGTGGCCACCAATGCCAACTACAGGAACGTGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTATGTGCATTCTGCTTaGCAAGCACCATGTCCATGG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHYVHSA*QAPCPW
Trigger: CCATGGACATGGTGCTTGCCAAGCAGAATGCACATA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGGGACCACATTATCTTaGGGTCATCGTGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKGTTLS*GHRVLL
Trigger: GAGCAGTACACGATGACCCCAAGATAATGTGGTCCC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTCCGGGCCCCAATATaGTGGCCAAGCTGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEFRAPI*WPSCLR
Trigger: CCGCAAACAGCTTGGCCACCATATTGGGGCCCGGAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTGTCTGGCATCACGTaGATGGAGGTTTTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVSGIT*MEVLSA
Trigger: TGCTGACAAAACCTCCATCCACGTGATGCCAGACAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGATATCTGGGGTGTCTaGCATCACGTGGATGGAGGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPDIWGV*HHVDGG
Trigger: ACCTCCATCCACGTGATGCCAGACACCCCAGATATC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGCCAGCAGGATATCTaGGGTGTCTGGCATCACGTG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGQQDI*GVWHHV
Trigger: CACGTGATGCCAGACACCCCAGATATCCTGCTGGCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGGCAGAATTACTCTTaGCCAGCAGGATATCTGGGG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKWQNYS*PAGYLG
Trigger: CCCCAGATATCCTGCTGGCCAAGAGTAATTCTGCCA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTATTTGTAGTCACTaGCGATGTCCCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCICSH*RCPWRP
Trigger: AGGCCTCCAGGGACATCGCCAGTGACTACAAATACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCACTGACCAGAGCCTaGGAATTTTTAGAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSLTRA*EFLECR
Trigger: CCTGCACTCTAAAAATTCCCAGGCTCTGGTCAGTGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATGGGCATGAACAAATaGCACAGCATCTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHMGMNK*HSIWRQ
Trigger: TTGCCTCCAGATGCTGTGCCATTTGTTCATGCCCAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCACTGAGGATGTACTaGCACCTTTTAGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSLRMY*HLLAST
Trigger: CGTGCTGGCTAAAAGGTGCCAGTACATCCTCAGTGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGTCGTATGATTTCTTaGCATGGAGGATTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGRMIS*HGGFGV
Trigger: CACCCCAAATCCTCCATGCCAAGAAATCATACGACC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCCCGATATTTGATATaGCTGGCCAGATGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSRYLI*LARCFW
Trigger: CCAGAAGCATCTGGCCAGCCATATCAAATATCGGGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAACTTGCAAGTCGGGGTaGCAAATCCATTCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPTCKSG*QIHSWR
Trigger: CCTCCACGAATGGATTTGCCACCCCGACTTGCAAGT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGCCTGCACGTAGACTaGTGTATCTGTGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSLHVD*CICDKL
Trigger: AAGCTTGTCACAGATACACCAGTCTACGTGCAGGCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGCAGGGTGCGCAGGCTaGTTTTGTATAGATTCGAAC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKAGCAG*FCIDSN
Trigger: GTTCGAATCTATACAAAACCAGCCTGCGCACCCTGC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGAAGTCTATATCCAGTaGGCAGGGTGCGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEEVYIQ*AGCAGW
Trigger: CCAGCCTGCGCACCCTGCCCACTGGATATAGACTTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTGAGGAGTGTCACCTaGAAGTCTATATCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVRSVT*KSISSG
Trigger: CCCACTGGATATAGACTTCCAGGTGACACTCCTCAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTGTCTTCTTGACTTaGCGGATCTCAGGGGTATCG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCVFLT*RISGVS
Trigger: CGATACCCCTGAGATCCGCCAAGTCAAGAAGACACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGGCAGAGAGATCATGTaGCCCTGCATCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKGREIM*PCILKK
Trigger: CTTCTTCAAGATGCAGGGCCACATGATCTCTCTGCC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGCTTCAAGGCTGTaGTCTGGTTTCCAGCGTGAT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKHASRL*SGFQRD
Trigger: ATCACGCTGGAAACCAGACCACAGCCTTGAAGCATG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGAGGATTGGCGTATCTaGAACCGGAGTGTACTTGTC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKEDWRI*NRSVLV
Trigger: GACAAGTACACTCCGGTTCCAGATACGCCAATCCTC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGCTCTGATGAGGATTaGCGTATCTGGAACCGGAGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGSDED*RIWNRS
Trigger: ACTCCGGTTCCAGATACGCCAATCCTCATCAGAGCC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTAGCGTAGATCACTaGCATTCCAGTAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCSVDH*HSSKPS
Trigger: AGAGGGCTTACTGGAATGCCAGTGATCTACGCTACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTGGACGATCAGGAATaGACCTCCAGATACCCAACT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLDDQE*TSRYPT
Trigger: AGTTGGGTATCTGGAGGTCCATTCCTGATCGTCCAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTGGTGGAAATGCTCTaGACGATCAGGAATGGACCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVVEML*TIRNGP
Trigger: AGGTCCATTCCTGATCGTCCAGAGCATTTCCACCAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCAGTGACTGCTCGGTaGTGGAAATGCTCTGGACGA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSVTAR*WKCSGR
Trigger: TCGTCCAGAGCATTTCCACCACCGAGCAGTCACTGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGACATGCAGCAACATaGGTGTGTCGTGGATTGTGG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGHAAT*VCRGLW
Trigger: CCACAATCCACGACACACCCATGTTGCTGCATGTCC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGAGTCCACTTCCAGTaGGCTTTGTTGGCTTCGTAC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGVHFQ*ALLASY
Trigger: GTACGAAGCCAACAAAGCCCACTGGAAGTGGACTCC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGATGACTTGGCAGCCTaGAGGAAGTCCGGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEDDLAA*RKSGRS
Trigger: TGACCGACCGGACTTCCTCCAGGCTGCCAAGTCATC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGCATGTTTCACCTCTaGTGGCTCCAGCATGATGGA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSMFHL*WLQHDG
Trigger: TCCATCATGCTGGAGCCACCAGAGGTGAAACATGCT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGCCTTCTTGATGTCTaGTCGATCAGCCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGLLDV*SISHCG
Trigger: ACCACAGTGGCTGATCGACCAGACATCAAGAAGGCC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACCTCACTGGCCTGTTTaGCTGCCTGTGTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEPHWPV*LPVWPS
Trigger: AGAAGGCCACACAGGCAGCCAAACAGGCCAGTGAGG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCTCGGTATTTAACCTaGCTGCTCAGCTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSRYLT*LLSLAA
Trigger: GGCAGCCAAGCTGAGCAGCCAGGTTAAATACCGAGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCCAGATTATCGGGTATaGTGTGGTAGTGGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHPDYRV*CGSGLY
Trigger: GTAAAGGCCACTACCACACCATACCCGATAATCTGG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATGTTTGTAAGCTGTTaGGACTGCAAAGACACCCCC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKMFVSC*DCKDTP
Trigger: GGGGGTGTCTTTGCAGTCTCAACAGCTTACAAACAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACCAGCAGTAGATGGATaGGATGGGATGGAAGATACC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPPAVDG*DGMEDT
Trigger: GGTATCTTCCATCCCATCTCATCCATCTACTGCTGG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGGCATCTCCATCCTTaGAGGACACCTCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPWHLHP*RTPHLH
Trigger: ATGCAGATGAGGTGTCCTTCAAGGATGGAGATGCCA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGTAGGCAACATCACTaGGAGCTTTCTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCRQHH*ELSGPG
Trigger: CCCAGGCCCAGAAAGCTCTCAGTGATGTTGCCTACA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGTAGGCAACATCACTaGGAGCTTTCTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECRQHH*ELSGPG
Trigger: CCCAGGCCCAGAAAGCTCTCAGTGATGTTGCCTACA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGCCAGAGGCGTGAATTaGGCTTGCTGTTCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKARGVN*ACCSAR
Trigger: TCTCGCTGAACAGCAAGCTCAATTCACGCCTCTGGC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTGTTTCGGTCTGCATaGAGTAGATCTGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVFRSA*SRSGLS
Trigger: TGAAAGACCAGATCTACTTCATGCAGACCGAAACAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTCATTGAGGATGTCTaGAGCTCGCTTTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLIEDV*SSLCLF
Trigger: GAAAAGGCAAAGCGAGCTTCAGACATCCTCAATGAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGTTTAGGGTCATCTTaGAGACTTTGGAAGCCAACC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSLGSS*RLWKPT
Trigger: GGTTGGCTTCCAAAGTCTTCAAGATGACCCTAAACT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTGGCCTGGAGAAACTaGGGAAGATCAGGACTCATG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLAWRN*GRSGLM
Trigger: CATGAGTCCTGATCTTCCTCAGTTTCTCCAGGCCAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTGGTGGCAACCTCCTaGGATTTCTTTGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLVATS*DFFAAV
Trigger: GACAGCTGCAAAGAAATCTCAGGAGGTTGCCACCAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGTGTAGTGGTGGTATaGCTGTCTGTAGTTGGCGTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSVVVV*LSVVGV
Trigger: AACGCCAACTACAGACAGTCATACCACCACTACACT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGCTGGCGGTATTTCTaGTCACTGGCATATTCAGTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCWRYF*SLAYSV
Trigger: AACTGAATATGCCAGTGATCAGAAATACCGCCAGCA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCAGGAATGCTGGTaGACTTGTTTCTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKHQECW*TCFCLE
Trigger: CTCCAGACAGAAACAAGTTCACCAGCATTCCTGATG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTTTGGCATGATTaGCGGACACGGAGTCATTTG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKHVWHD*RTRSHL
Trigger: CAAATGACTCCGTGTCCGTCAATCATGCCAAACATG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTGAGGGTGTACTTTaGTTTGGTGGCATTCCAGTC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCEGVL*FGGIPV
Trigger: GACTGGAATGCCACCAAATCAAAGTACACCCTCACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGATAATCAATATCACTaGCAAGGGTCTGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKDNQYH*QGSAPA
Trigger: AGCAGGGGCAGACCCTTGTCAGTGATATTGATTATC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCGTTCTGGTCAGGATaGCACATCCATTGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSFWSG*HIHWCK
Trigger: CTTGCACCAATGGATGTGTCATCCTGACCAGAACGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGGAAATCCAGACAGTaGACCACACCAGGGAATTCA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKWKSRQ*TTPGNS
Trigger: TGAATTCCCTGGTGTGGTTCACTGTCTGGATTTCCA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTTTTAGCCAGCACGTaGTTCATCATGTCATTGGGG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLLAST*FIMSLG
Trigger: CCCCAATGACATGATGAATCACGTGCTGGCTAAAAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGATACTCCAGGTCACTaGGGATGTACTGGCACCTTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPDTPGH*GCTGTF
Trigger: AAAGGTGCCAGTACATCCTCAGTGACCTGGAGTATC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGAGGGGCGTGTCTGTaGCCAGATTATAGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRGACL*PDYSFV
Trigger: TACAAAACTATAATCTGGTCACAGACACGCCCCTCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTGACTTTCCTGACGTaGTCATTGACTTGCAAGTCG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVTFLT*SLTCKS
Trigger: CGACTTGCAAGTCAATGATCACGTCAGGAAAGTCAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGCCTTTCAGCCAGTTaGGGTCATCCTTGTATACAA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCLSAS*GHPCIQ
Trigger: TTGTATACAAGGATGACCTCAACTGGCTGAAAGGCA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGACTGGTGTATCTGTaGCAAGCTTGTAGTCATTCC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRLVYL*QACSHS
Trigger: GGAATGACTACAAGCTTGTCACAGATACACCAGTCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGAGCCACTTTGCCTCTaGCACTGTGCACATAGTCAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPEPLCL*HCAHSH
Trigger: ATGACTATGTGCACAGTGTCAGAGGCAAAGTGGCTC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCTCTTGTGTCTTCTTaGCTTGGCGGATCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKPLVSS*LGGSQG
Trigger: CCCCTGAGATCCGCCAAGTCAAGAAGACACAAGAGG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTGGCCCTGCATCTTaGAGAAGTCTGATTTGTAGA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCGPAS*RSLICR
Trigger: TCTACAAATCAGACTTCTTCAAGATGCAGGGCCACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACGTCCTTGGCTGCTTTaGTATGAACAGCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRPWLL*YEQHLA
Trigger: AGCCAGATGCTGTTCATATCAAAGCAGCCAAGGACG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGCTTGCAACCCTTaGGGAACTCCCGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEKACNP*GTPGPA
Trigger: AGCTGGACCGGGAGTTCCTCAAGGGTTGCAAGCTTT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTATTAAAGTATTCCTaGGGGCGAGCACCGTGTTTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLLKYS*GRAPCF
Trigger: AAAACACGGTGCTCGCCCTCAGGAATACTTTAATAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTGCCAAGTGCTTCTTaGCATGGTCCTTGTACTTGT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVPSAS*HGPCTC
Trigger: ACAAGTACAAGGACCATGTCAAGAAGCACTTGGCAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTCACTTCCTTGACGTaGACAGTGTCCCGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVTSLT*TVSRVS
Trigger: AGAGACCCGGGACACTGTTCACGTCAAGGAAGTGAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTCACTTCCTTGACGTaGACAGTGTCCCGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVTSLT*TVSRVS
Trigger: AGAGACCCGGGACACTGTTCACGTCAAGGAAGTGAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTGGTGGCTCCAGCATaGTGGAGTAGTTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLVAPA*WSSWIF
Trigger: GAAAATCCAACTACTCCATCATGCTGGAGCCACCAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCTGTGTGGCCTTCTTaGTGTCTGGTCGATCAGCCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKPVWPS*CLVDQP
Trigger: TGGCTGATCGACCAGACATCAAGAAGGCCACACAGG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCAGTCACGGGTTTGTaGAGTTTCTTCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSVTGL*SFFRSA
Trigger: GGCTGACCTGAAGAAACTTCACAAACCCGTGACTGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTGGCCTCTTTTAGGTaGAGCTGCTCCAGATTATCG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVASFR*SCSRLS
Trigger: CGATAATCTGGAGCAGCTTCACCTAAAAGAGGCCAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGAGCTAATGTGCTTCTaGGTCTCCTTCACACGTTTC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKELMCF*VSFTRF
Trigger: GAAACGTGTGAAGGAGACGCAGAAGCACATTAGCTC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGGAGTGACAGGGGTTaGGGTGGCTTTCCCCACATT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRSDRG*GGFPHI
Trigger: AATGTGGGGAAAGCCACCGCAACCCCTGTCACTCCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGGAGTGACAGGGGTTaGGGTGGCTTTCCCCACATT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERSDRG*GGFPHI
Trigger: AATGTGGGGAAAGCCACCGCAACCCCTGTCACTCCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAAAGGGTGTGGGGGTTaGTTTCCCCAGGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPKGCGG*FPQVLF
Trigger: AAAGAGAACCTGGGGAAAGCAACCCCCACACCCTTT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTCACCGTTGAGATGTaGCGTTGGGTCTCCCTCACC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFTVEM*RWVSLT
Trigger: GGTGAGGGAGACCCAACGGCACATCTCAACGGTGAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCTGGTGCTTCTGAATaGTCAGACTTCTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSGASE*SDFSSP
Trigger: GGGTGAGGAGAAGTCTGAGCATTCAGAAGCACCAGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTCCTGCCAGTCCTCTaGACAGTGCCATACATCCAG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVLPVL*TVPYIQ
Trigger: CTGGATGTATGGCACTGTGCAGAGGACTGGCAGGAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTCCTGCCAGTCCTCTaGACAGTGCCATACATCCAG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVLPVL*TVPYIQ
Trigger: CTGGATGTATGGCACTGTGCAGAGGACTGGCAGGAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAACCGAAACATTGACTaGAGGATCTGTAAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHNRNID*RICKSC
Trigger: GCAGGACTTACAGATCCTGCAGTCAATGTTTCGGTT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGCCAGTGCTGGCTGTaGCAGAGCTGGTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCQCWL*QSWFGS
Trigger: ACTTCCAAACCAGCTCTGGCACAGCCAGCACTGGCA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTGGAGTATCTGTTGTaGTGGCGTATGGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLEYLL*WRMAVL
Trigger: AAGGACAGCCATACGCCAGCACAACAGATACTCCAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGAGGGAAGAAGCCTTTaGCTCTGTCTTCTTCGTATT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHEGRSL*LCLLRI
Trigger: AATACGAAGAAGACAGAGGCAAAGGCTTCTTCCCTC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCTCTGCAGCGCATATaGCTTCTTGGCAAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEALQRI*LLGKVH
Trigger: GTGGACCTTGCCAAGAAGGCATATGCGCTGCAGAGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGCTCTGCAGCGCATATaGCTTCTTGGCAAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKALQRI*LLGKVH
Trigger: GTGGACCTTGCCAAGAAGGCATATGCGCTGCAGAGC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTATTCAACATCGCTCTaGAGCGCATATGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHYSTSL*SAYAFL
Trigger: CAAGAAGGCATATGCGCTGCAGAGCGATGTTGAATA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACGCCCAGCACATTGTTaGCCTTGGCTATTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKRPAHC*PWLLSH
Trigger: ATGACTTAATAGCCAAGGGCAACAATGTGCTGGGCG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTGACATTCCTCGTATaGTCAAGACTCATGGCGTCA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLTFLV*SRLMAS
Trigger: TGACGCCATGAGTCTTGAGCATACGAGGAATGTCAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCTGAGCCAACACCATaGCCATGGAATCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEAEPTP*PWNQAH
Trigger: GTGTGCCTGATTCCATGGGCATGGTGTTGGCTCAGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTGGTACTTGGTCTTaGTGGCTTCATAGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCGTWS*WLHSPF
Trigger: AAAAGGGCTATGAAGCCAGCAAGACCAAGTACCACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTCTCTAGAGGCTCTTaGAGCCTTTATTGCAATGGC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVSRGS*SLYCNG
Trigger: GCCATTGCAATAAAGGCTGCAAGAGCCTCTAGAGAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATATTCCCGGTCTGACTaGATCTTGGCCACTTGCATG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPYSRSD*ILATCM
Trigger: CATGCAAGTGGCCAAGATGCAGTCAGACCGGGAATA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTCAAAGTGTCTGGGTaGTGGCGGTACTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFKVSG*WRYFFS
Trigger: TGAAAAGAAGTACCGCCAGCACCCAGACACTTTGAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGCTTGGGCATCCTTTaGAGCCGTGACACTGAGCAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGLGIL*SRDTEH
Trigger: ATGCTCAGTGTCACGGCTGCAAAGGATGCCCAAGCC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGCTTGGGCATCCTTTaGAGCCGTGACACTGAGCAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGLGIL*SRDTEH
Trigger: ATGCTCAGTGTCACGGCTGCAAAGGATGCCCAAGCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATACTGGCATATTCAGTTaGTTTCTTGGCCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHTGIFS*FLGLLH
Trigger: GTGGAGAAGGCCAAGAAAGCAACTGAATATGCCAGT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATGGTATGTGCATTCTaGTTGGCAAGCACCATGTCC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKMVCAF*LASTMS
Trigger: GGACATGGTGCTTGCCAAGCAGAATGCACATACCAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTCCCGGGAGGCTTTTaGTGCTTTGATTGGTATGGC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFPGGF*CFDWYG
Trigger: GCCATACCAATCAAAGCAGCAAAAGCCTCCCGGGAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATACTCACGGTCACTCTaGACTTTGGCAATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPYSRSL*TLAMWR
Trigger: CCTCCACATTGCCAAAGTGCAGAGTGACCGTGAGTA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACGTTTTGATCCGGCATaGATGTCCATTCATGCAGGT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKRFDPA*MSIHAG
Trigger: ACCTGCATGAATGGACATGCATGCCGGATCAAAACG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCACTCTGAACGTCATTaGAGTGATGGGCATGAACAA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHHSERH*SDGHEQ
Trigger: TTGTTCATGCCCATCACTGCAATGACGTTCAGAGTG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATTCTGAATCTGGCCTaGATGCTCAAACCAAACCAG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHILNLA*MLKPNQ
Trigger: CTGGTTTGGTTTGAGCATGCAGGCCAGATTCAGAAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTGTCAGGGACAAGGTaGTGGAAGGCAGGATGTAGC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVSGTR*WKAGCS
Trigger: GCTACATCCTGCCTTCCAGCACCTTGTCCCTGACAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTGTCAGGGACAAGGTaGTGGAAGGCAGGATGTAGC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVSGTR*WKAGCS
Trigger: GCTACATCCTGCCTTCCAGCACCTTGTCCCTGACAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATATGGCTGGCCAGATaGTTCTGGTTCTTGGCGTGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPIWLAR*FWFLAC
Trigger: ACACGCCAAGAACCAGAAGCATCTGGCCAGCCATAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAACTCGGAGGCACCGTaGTGTGTTCGGATCATCGTC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTENSEAP*CVRIIV
Trigger: GACGATGATCCGAACACAGCACGGTGCCTCCGAGTT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAACTCGGAGGCACCGTaGTGTGTTCGGATCATCGTC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKNSEAP*CVRIIV
Trigger: GACGATGATCCGAACACAGCACGGTGCCTCCGAGTT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAACTCTGGAGCTTGTATaGATGAAGGGCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKTLELV*MKGPVQ
Trigger: CTGGACCGGGCCCTTCATGCATACAAGCTCCAGAGT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAACTCTGGAGCTTGTATaGATGAAGGGCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTETLELV*MKGPVQ
Trigger: CTGGACCGGGCCCTTCATGCATACAAGCTCCAGAGT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTAAAGATTGACTTCTaGTTCTTGCCTGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVKIDF*FLPAAL
Trigger: CAGAGCTGCAGGCAAGAAGCAGAAGTCAATCTTTAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTAGGCGTCCTTGGCTaGTTTGATATGAACAGCATC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVGVLG*FDMNSI
Trigger: GATGCTGTTCATATCAAAGCAGCCAAGGACGCCTAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCAAAATCGCTTTGCTaGAGGGATGACTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSKSLC*RDDLAA
Trigger: GGCTGCCAAGTCATCCCTGCAGCAAAGCGATTTTGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACATGGCTGCCTTCCTTaGGGTGCTTGGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEHGCLP*GAWLCT
Trigger: AGTACAGAGCCAAGCACCGCAAGGAAGGCAGCCATG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACATGGCTGCCTTCCTTaGGGTGCTTGGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKHGCLP*GAWLCT
Trigger: AGTACAGAGCCAAGCACCGCAAGGAAGGCAGCCATG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTAGGGGAGTCCCCTTaGTCAAGTTCTCTTTGTACA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVGESP*SSSLCT
Trigger: TGTACAAAGAGAACTTGAGCAAGGGGACTCCCCTAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397345.8
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAGGCAGGTCAGGGATTaGAGTTCCTTGTCCTATTGC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRQVRD*SSLSYC
Trigger: GCAATAGGACAAGGAACTCCAATCCCTGACCTGCCT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCTCTGGAGTCACAGTaGTTGGAATGCCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSLESQ*LECLFP
Trigger: TGGGAACAGGCATTCCAACCACTGTGACTCCAGAGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGACTCTCTCAATCTCTaGAGTCACAGTGGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHDSLNL*SHSGWN
Trigger: ATTCCAACCACTGTGACTCCAGAGATTGAGAGAGTC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAGGATCTGTCACCACTaGTGTGAAGCAACCCTTGTG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRICHH*CEATLV
Trigger: CACAAGGGTTGCTTCACACCAGTGGTGACAGATCCT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTAAGCTTCGGGACTaGATGTTGTCTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCKLRD*MLSSAG
Trigger: TCCAGCAGAAGACAACATCCAGTCCCGAAGCTTACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTCAACGTAGTTGGCTaGGAGCATTCCGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFNVVG*EHSGPA
Trigger: GGCAGGACCGGAATGCTCCCAGCCAACTACGTTGAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTCAACGTAGTTGGCTaGGAGCATTCCGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEFNVVG*EHSGPA
Trigger: GGCAGGACCGGAATGCTCCCAGCCAACTACGTTGAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTTGTGCTGGCGTATaGCTGTCCTTTTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCCAGV*LSFCFL
Trigger: GAGAAAACAAAAGGACAGCCATACGCCAGCACAACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTGTTCTTAACGGCCTaGACAAGTTCAGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVFLTA*TSSGAS
Trigger: TGATGCCCCTGAACTTGTCCAGGCCGTTAAGAACAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTTTCGTGTTGAGCTaGGCTTGCAACAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCFVLS*ACNSTG
Trigger: TCCTGTACTGTTGCAAGCCCAGCTCAACACGAAACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGCATCTGCTGGTATATaGCACTTGAACTTCTCACCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHASAGI*HLNFSP
Trigger: AGGTGAGAAGTTCAAGTGCCATATACCAGCAGATGC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTGGGGCAGGTCTGGTaGCAGGTTGTATTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLGQVW*QVVFVN
Trigger: ATTCACAAATACAACCTGCCACCAGACCTGCCCCAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTGCTGACCACATCCTaGGCTTTCTTAGCCGCCACG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELLTTS*AFLAAT
Trigger: CGTGGCGGCTAAGAAAGCCCAGGATGTGGTCAGCAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTAAGCATTGCACTTaGCCTGGAGAAACTGAGGAA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCKHCT*PGETEE
Trigger: TTCCTCAGTTTCTCCAGGCCAAGTGCAATGCTTACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTATGCTCAAGACTCATaGCGTCAGGTAGGTATGTGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHYAQDS*RQVGMC
Trigger: ACACATACCTACCTGACGCCATGAGTCTTGAGCATA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACAACTTGCTTGCCTTTaGCTTTCTCGTAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPQLACL*LSRRPP
Trigger: AGGAGGCCTACGAGAAAGCCAAAGGCAAGCAAGTTG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGTACTTGGTCTTGCTaGCTTCATAGCCCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGTWSC*LHSPFC
Trigger: ACAAAAAGGGCTATGAAGCCAGCAAGACCAAGTACC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTAGTTGGCGTTGGTaGCAACCTCCTGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCSWRW*QPPEIS
Trigger: AGAAATCTCAGGAGGTTGCCACCAACGCCAACTACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACACTCTGAATCTGCATaGCATTCCTGGAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPHSESA*HSWSAP
Trigger: TGGAGCACTCCAGGAATGCCATGCAGATTCAGAGTG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAGCTTCTCGGGGTGCTaGCGATACTTCTTCTCACTA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSFSGC*RYFFSL
Trigger: TAGTGAGAAGAAGTATCGCCAGCACCCCGAGAAGCT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCACGTTCCTGTAGTTaGCATTGGTGGCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSRSCS*HWWPLP
Trigger: AGGAAGTGGCCACCAATGCCAACTACAGGAACGTGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAAAGTGTCTGGGTGCTaGCGGTACTTCTTTTCACTA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHKVSGC*RYFFSL
Trigger: TAGTGAAAAGAAGTACCGCCAGCACCCAGACACTTT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGGAATGGACTAATTTaGGATCATCCTCGAGACTGC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHWNGLI*DHPRDC
Trigger: GCAGTCTCGAGGATGATCCCAAATTAGTCCATTCCA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGGACAACACAAGTTTTaGGTCATCTTGCAGACTCCG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKGQHKF*VILQTP
Trigger: CGGAGTCTGCAAGATGACCCAAAACTTGTGTTGTCC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCTTGGCTTCTTCCATaGCCTGACGATAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSWLLP*PDDRGS
Trigger: AGAGCCTCTATCGTCAGGCCATGGAAGAAGCCAAGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGCACTTTGGCAATGTaGAGGGACCACATTATCTTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCTLAM*RDHIIL
Trigger: CAAGATAATGTGGTCCCTCCACATTGCCAAAGTGCA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTGCTTGGATTGGAATaGCATCCAGACGCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLLGLE*HPDASH
Trigger: ATGACTTGCGTCTGGATGCCATTCCAATCCAAGCAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTTGGCTGCTTGGATTaGAATGGCATCCAGACGCAA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLGCLD*NGIQTQ
Trigger: TTGCGTCTGGATGCCATTCCAATCCAAGCAGCCAAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACATGTGAATTTGAGCTaGTCTGCAGGCTGGCGATAC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPHVNLS*SAGWRY
Trigger: GTATCGCCAGCCTGCAGACCAGCTCAAATTCACATG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTGTCTGGCATCACGTaGATGGAGGTTTTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVSGIT*MEVLSA
Trigger: TGCTGACAAAACCTCCATCCACGTGATGCCAGACAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGGCAGAATTACTCTTaGCCAGCAGGATATCTGGGG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPWQNYS*PAGYLG
Trigger: CCCCAGATATCCTGCTGGCCAAGAGTAATTCTGCCA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAACTTCAGGAGACCCTTaGGGCATCCAGCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKTSGDP*GIQPMP
Trigger: TGGCATTGGCTGGATGCCCCAAGGGTCTCCTGAAGT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAACTTCAGGAGACCCTTaGGGCATCCAGCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTETSGDP*GIQPMP
Trigger: TGGCATTGGCTGGATGCCCCAAGGGTCTCCTGAAGT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACAGGGCTCTGGATCTTaGCCTTCCATTTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEQGSGS*PSIWPS
Trigger: ACTGGGCCAAATGGAAGGCCAAGATCCAGAGCCCTG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACAGGGCTCTGGATCTTaGCCTTCCATTTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKQGSGS*PSIWPS
Trigger: ACTGGGCCAAATGGAAGGCCAAGATCCAGAGCCCTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGGTGTACTTTGATTTaGTGGCATTCCAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGCTLI*WHSSLS
Trigger: GGAAAGACTGGAATGCCACCAAATCAAAGTACACCC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATGGGCATGAACAAATaGCACAGCATCTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKMGMNK*HSIWRQ
Trigger: TTGCCTCCAGATGCTGTGCCATTTGTTCATGCCCAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTCCACAGAATCCAGTaGGATCCAGCCAATGCCTCG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVHRIQ*DPANAS
Trigger: CGAGGCATTGGCTGGATCCCACTGGATTCTGTGGAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTTTTCCCATGTCTTTaGAGTGGGAGATATGTGGTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVFPCL*SGRYVV
Trigger: CACCACATATCTCCCACTCCAAAGACATGGGAAAAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGCTTGGCTCCAACAATaGGAATGTAGCGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPAWLQQ*ECSAHP
Trigger: TGGATGAGCGCTACATTCCCATTGTTGGAGCCAAGC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCACTGAGGATGTACTaGCACCTTTTAGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSLRMY*HLLAST
Trigger: CGTGCTGGCTAAAAGGTGCCAGTACATCCTCAGTGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCACTCAAGATCTCCTaGGCGTTTCGGACGCGTATA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSLKIS*AFRTRI
Trigger: TATACGCGTCCGAAACGCCCAGGAGATCTTGAGTGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAAGGCAGGATGTAGCTaGTGGCTTTCACTCTATCCC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPKAGCS*WLSLYP
Trigger: GGGATAGAGTGAAAGCCACCAGCTACATCCTGCCTT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACTGGCCAGATGCTTCTaGTTCTTGGCGTGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLARCF*FLACVR
Trigger: CCTGACACACGCCAAGAACCAGAAGCATCTGGCCAG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACTGGCCAGATGCTTCTaGTTCTTGGCGTGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELARCF*FLACVR
Trigger: CCTGACACACGCCAAGAACCAGAAGCATCTGGCCAG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCACTGACTTTCTTCTaGGAATCCTTGGCAGTAACC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSLTFF*ESLAVT
Trigger: GGTTACTGCCAAGGATTCCCAGAAGAAAGTCAGTGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGATCATAAGCATGCTTaGCATGGAGGATTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHDHKHA*HGGFQE
Trigger: CTCCTGAAATCCTCCATGCCAAGCATGCTTATGATC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACACGGTTTTGGTAGTTaGAGCCACTTTGCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPHGFGS*SHFASD
Trigger: GTCAGAGGCAAAGTGGCTCCAACTACCAAAACCGTG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGCAGGGTGCGCAGGCTaGTTTTGTATAGATTCGAAC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPAGCAG*FCIDSN
Trigger: GTTCGAATCTATACAAAACCAGCCTGCGCACCCTGC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTGACTCTCCGGACGTaGACAAATGGAACATCTTTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLTLRT*TNGTSL
Trigger: CAAAGATGTTCCATTTGTCCACGTCCGGAGAGTCAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGTGTCTTCTTGACTTaGCGGATCTCAGGGGTATCG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPCVFLT*RISGVS
Trigger: CGATACCCCTGAGATCCGCCAAGTCAAGAAGACACA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGCAGAGAGATCATGTaGCCCTGCATCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGREIM*PCILKK
Trigger: CTTCTTCAAGATGCAGGGCCACATGATCTCTCTGCC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGGGTCTCTCTTTGGTaGCAAGTTCAACATACAGAT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGVSLW*QVQHTD
Trigger: ATCTGTATGTTGAACTTGCCACCAAAGAGAGACCCC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACATGCTTCAAGGCTGTaGTCTGGTTTCCAGCGTGAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPHASRL*SGFQRD
Trigger: ATCACGCTGGAAACCAGACCACAGCCTTGAAGCATG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTGGACGATCAGGAATaGACCTCCAGATACCCAACT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLDDQE*TSRYPT
Trigger: AGTTGGGTATCTGGAGGTCCATTCCTGATCGTCCAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTGGTGGAAATGCTCTaGACGATCAGGAATGGACCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVVEML*TIRNGP
Trigger: AGGTCCATTCCTGATCGTCCAGAGCATTTCCACCAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGATATGAACAGCATCTaGCTCAATGGTGCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHDMNSI*LNGAVG
Trigger: TCCAACTGCACCATTGAGCCAGATGCTGTTCATATC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATGTTTCACCTCTGGTaGCTCCAGCATGATGGAGTA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKMFHLW*LQHDGV
Trigger: TACTCCATCATGCTGGAGCCACCAGAGGTGAAACAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGTACTCCACCTCACTaGCCTGTTTGGCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCTPPH*PVWLPV
Trigger: CACAGGCAGCCAAACAGGCCAGTGAGGTGGAGTACA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACTTCCTTGCGGTGCTTaGCTCTGTACTCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLPCGA*LCTPPH
Trigger: GTGAGGTGGAGTACAGAGCCAAGCACCGCAAGGAAG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGCATGCTTAAGCCATaGCTGCCTTCCTTGCGGTGC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSMLKP*LPSLRC
Trigger: GCACCGCAAGGAAGGCAGCCATGGCTTAAGCATGCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACCTGGCTGCTCAGCTTaGCTGCCTTCTTGGCCATTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEPGCSA*LPSWPF
Trigger: AAATGGCCAAGAAGGCAGCCAAGCTGAGCAGCCAGG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGCAGTGATGTACGTTaGTGTTTCAAAGTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGSDVR*CFKVQH
Trigger: ATGCTGGACTTTGAAACACCAACGTACATCACTGCC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAATCCGGAGTTTCATTaGCCATGGCATTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPNPEFH*PWHSGL
Trigger: GAGGCCTGAATGCCATGGCCAATGAAACTCCGGATT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGTATTGGAGAAGGCTaGAGTTCTTTTGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGIGEG*SSFGSP
Trigger: GGGAGAACCAAAAGAACTTCAGCCTTCTCCAATACC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATGATATTTCACCGTTaGGATGTGCCGTTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPMIFHR*DVPLGL
Trigger: GAGACCCAACGGCACATCTCAACGGTGAAATATCAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTGGTCTGGTGCTTCTaGATGCTCAGACTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVVWCF*MLRLLL
Trigger: GAGGAGAAGTCTGAGCATTCAGAAGCACCAGACCAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTGGTCTGGTGCTTCTaGATGCTCAGACTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVVWCF*MLRLLL
Trigger: GAGGAGAAGTCTGAGCATTCAGAAGCACCAGACCAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATGTTTGTAAGCTGTTaGGACTGCAAAGACACCCCC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPMFVSC*DCKDTP
Trigger: GGGGGTGTCTTTGCAGTCTCAACAGCTTACAAACAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCCTGCAGACAAGTGTaGTGCTTTGAAATGCCTAAA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSCRQV*CFEMPK
Trigger: TTTAGGCATTTCAAAGCATCACACTTGTCTGCAGGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACAATGTAGGGGGTCATaGACTTTGAAGGATCCACTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKQCRGS*TLKDPL
Trigger: AAGTGGATCCTTCAAAGTTCATGACCCCCTACATTG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTGTTTCGGTCTGCATaGAGTAGATCTGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVFRSA*SRSGLS
Trigger: TGAAAGACCAGATCTACTTCATGCAGACCGAAACAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAAGCTGTGGGTTCTCTaGAGCAGGAAGCACATTATA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKKLWVL*SRKHII
Trigger: TATAATGTGCTTCCTGCTTCAGAGAACCCACAGCTT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACAGCTTTGGCAGCTCTaGTGGGAATCGCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEQLWQL*WESHQF
Trigger: GAACTGATGCGATTCCCATCAGAGCTGCCAAAGCTG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAGTGTAGTGGTGGTATaGCTGTCTGTAGTTGGCGTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSVVVV*LSVVGV
Trigger: AACGCCAACTACAGACAGTCATACCACCACTACACT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGTCCATGGCGTAAGTaGACTTCAGCTTCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCPWRK*TSASRG
Trigger: ACCCCGAGAAGCTGAAGTTCACTTACGCCATGGACA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACCGGTGTGTCAGGCATaGCATGAATGGTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEPVCQA*HEWWSC
Trigger: ACAAGACCACCATTCATGTCATGCCTGACACACCGG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACTTGTATTCCCGGTCTaGCTGCATCTTGGCCACTTG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLVFPV*LHLGHL
Trigger: CAAGTGGCCAAGATGCAGTCAGACCGGGAATACAAG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGCTGGCGGTATTTCTaGTCACTGGCATATTCAGTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCWRYF*SLAYSV
Trigger: AACTGAATATGCCAGTGATCAGAAATACCGCCAGCA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACATCAGGAATGCTGGTaGACTTGTTTCTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPHQECW*TCFCLE
Trigger: CTCCAGACAGAAACAAGTTCACCAGCATTCCTGATG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCAGCCACTGGAGATCTaGCTTGTAAATATTGTCACT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHQPLEI*LVNIVT
Trigger: AGTGACAATATTTACAAGTCAGATCTCCAGTGGCTG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397345.8
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACGGGCGCCAATGTGGTaGCCCAACTGTTTACGATAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERAPMW*PNCLRY
Trigger: ATATCGTAAACAGTTGGGTCACCACATTGGCGCCCG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATATTCTGGGCGTTTTTaGCTCTCAACACTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKYSGRF*LSTLQE
Trigger: CTCCTGAAGTGTTGAGAGTCAAAAACGCCCAGAATA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACATGTTTGGCATGATTaGCGGACACGGAGTCATTTG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPHVWHD*RTRSHL
Trigger: CAAATGACTCCGTGTCCGTCAATCATGCCAAACATG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACTTGGCGGCCAAGACTaGCACCATATCAGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLGGQD*HHISRY
Trigger: ATACCTGCTGATATGGTGTCAGTCTTGGCCGCCAAG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACTTGGCGGCCAAGACTaGCACCATATCAGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELGGQD*HHISRY
Trigger: ATACCTGCTGATATGGTGTCAGTCTTGGCCGCCAAG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGATAATCAATATCACTaGCAAGGGTCTGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPDNQYH*QGSAPA
Trigger: AGCAGGGGCAGACCCTTGTCAGTGATATTGATTATC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGGAAATCCAGACAGTaGACCACACCAGGGAATTCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPWKSRQ*TTPGNS
Trigger: TGAATTCCCTGGTGTGGTTCACTGTCTGGATTTCCA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTTTTAGCCAGCACGTaGTTCATCATGTCATTGGGG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLLAST*FIMSLG
Trigger: CCCCAATGACATGATGAATCACGTGCTGGCTAAAAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAACTCTGAAGGTCGTATaGTTTCTTGGCATGGAGGAT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKTLKVV*FLGMED
Trigger: ATCCTCCATGCCAAGAAATCATACGACCTTCAGAGT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATTCTTCCCGATATTTaGTATGGCTGGCCAGATGCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKILPDI*YGWPDA
Trigger: AGCATCTGGCCAGCCATATCAAATATCGGGAAGAAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTGACTTTCCTGACGTaGTCATTGACTTGCAAGTCG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVTFLT*SLTCKS
Trigger: CGACTTGCAAGTCAATGATCACGTCAGGAAAGTCAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAACAATATCGCTGATCTaGTCTGTGACTTTCCTGACG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKTISLI*SVTFLT
Trigger: CGTCAGGAAAGTCACAGATCAGATCAGCGATATTGT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGCCTTTCAGCCAGTTaGGGTCATCCTTGTATACAA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCLSAS*GHPCIQ
Trigger: TTGTATACAAGGATGACCTCAACTGGCTGAAAGGCA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGACTGGTGTATCTGTaGCAAGCTTGTAGTCATTCC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKRLVYL*QACSHS
Trigger: GGAATGACTACAAGCTTGTCACAGATACACCAGTCT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCTGTTTCCCACTTTTaGCAGCCTGCACGTAGACTG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEAVSHF*QPARRL
Trigger: CAGTCTACGTGCAGGCTGTCAAAAGTGGGAAACAGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTGATGTGTTTGAAGTaGGGAGTGTCACCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLMCLK*GVSPGS
Trigger: ACTTCCAGGTGACACTCCTCACTTCAAACACATCAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTGGCCCTGCATCTTaGAGAAGTCTGATTTGTAGA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCGPAS*RSLICR
Trigger: TCTACAAATCAGACTTCTTCAAGATGCAGGGCCACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGTTTTTCCTGTATTTaGTCTGGCTCCACATATGCG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSFSCI*SGSTYA
Trigger: CGCATATGTGGAGCCAGATCAAATACAGGAAAAACT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397345.8
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTGGCTGCTTTGATATaGACAGCATCTGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLAALI*TASGSM
Trigger: CATTGAGCCAGATGCTGTTCATATCAAAGCAGCCAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTTTTTGTCATCAGTaGCAGAAAGCTTGCAACCCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCFCHQ*QKACNP
Trigger: AGGGTTGCAAGCTTTCTGTCACTGATGACAAAAACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTGCCAAGTGCTTCTTaGCATGGTCCTTGTACTTGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVPSAS*HGPCTC
Trigger: ACAAGTACAAGGACCATGTCAAGAAGCACTTGGCAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCAGGACATGATTCATaGTCAGAGACTCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSGHDS*SETPSC
Trigger: ACATGAAGGAGTCTCTGATCATGAATCATGTCCTGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGAGACTCTTTGGCAGTaGTGTACGTTGGTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKETLWQ*CTLVFQ
Trigger: TTGAAACACCAACGTACATCACTGCCAAAGAGTCTC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTCTGCATCTGCTaGGACTCTTTGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKPLCIC*DSLAVM
Trigger: CATCACTGCCAAAGAGTCTCAGCAGATGCAGAGTGG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCAGGCCTCTTCCTTTaGCTTCCAGTTCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSGLFL*LPVPGL
Trigger: GAGACCTGGAACTGGAAGTCAAAGGAAGAGGCCTGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCAGGCCTCTTCCTTTaGCTTCCAGTTCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESGLFL*LPVPGL
Trigger: GAGACCTGGAACTGGAAGTCAAAGGAAGAGGCCTGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTTGTTGGGCATGAATaGTCTCTGGAGTATCAACCA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLVGHE*SLEYQP
Trigger: TGGTTGATACTCCAGAGATCATTCATGCCCAACAAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTGACTTGTTGGGCATaGATGATCTCTGGAGTATCA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLTCWA*MISGVS
Trigger: TGATACTCCAGAGATCATTCATGCCCAACAAGTCAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGAGCTAATGTGCTTCTaGGTCTCCTTCACACGTTTC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPELMCF*VSFTRF
Trigger: GAAACGTGTGAAGGAGACGCAGAAGCACATTAGCTC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGAAGGACACCTCATCTaGATCAGCAGCCATATAGTC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPEGHLI*ISSHIV
Trigger: GACTATATGGCTGCTGATGCAGATGAGGTGTCCTTC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAACCGAAACATTGACTaGAGGATCTGTAAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKNRNID*RICKSC
Trigger: GCAGGACTTACAGATCCTGCAGTCAATGTTTCGGTT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCATTTTCTGACTGTGTaGAATGTAGGGGGTCATGAA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHHFLTV*NVGGHE
Trigger: TTCATGACCCCCTACATTGCACACAGTCAGAAAATG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGAGCTGCAACTTTCATaGAGTGTGTGTGATATGGGT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKELQLS*SVCDMG
Trigger: ACCCATATCACACACACTGCATGAAAGTTGCAGCTC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTGTTGAGCTGGGCTTaGAACAGTACAGGAGAATCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVLSWA*NSTGES
Trigger: TGATTCTCCTGTACTGTTGCAAGCCCAGCTCAACAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATATTCAACATCGCTCTaGAGCGCATATGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKYSTSL*SAYAFL
Trigger: CAAGAAGGCATATGCGCTGCAGAGCGATGTTGAATA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTTCGTGTTCTGTTTTaGCTGGACCATAACTGGGGA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLRVLF*LDHNWG
Trigger: TCCCCAGTTATGGTCCAGGCAAAACAGAACACGAAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACGCCCAGCACATTGTTaGCCTTGGCTATTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRPAHC*PWLLSH
Trigger: ATGACTTAATAGCCAAGGGCAACAATGTGCTGGGCG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGCAATGTTTCTCGATaGCTTGGCTGCAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGNVSR*LGCSDG
Trigger: CCCATCACTGCAGCCAAGGCATCGAGAAACATTGCC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGCAATGTTTCTCGATaGCTTGGCTGCAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGNVSR*LGCSDG
Trigger: CCCATCACTGCAGCCAAGGCATCGAGAAACATTGCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATCAGACTGCAGCTTTaGCACATTCATATAGTGGAC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHIRLQL*HIHIVD
Trigger: GTCCACTATATGAATGTGGCAAAGCTGCAGTCTGAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATCCTGGGCCATCTTTaGAGCTGTGATGCTAACCAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPILGHL*SCDANH
Trigger: ATGGTTAGCATCACAGCTGCAAAGATGGCCCAGGAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGAAATCCAACTTGCTTaGCTTTGGCTTTCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKEIQLA*LWLSRR
Trigger: CCTACGAGAAAGCCAAAGGCAAGCAAGTTGGATTTC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTGGTACTTGGTCTTaGTGGCTTCATAGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCGTWS*WLHSPF
Trigger: AAAAGGGCTATGAAGCCAGCAAGACCAAGTACCACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCTTGCAGCCTTTATTaGAATGGCATCAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSCSLY*NGIRPQ
Trigger: CTGAGGCCTGATGCCATTGCAATAAAGGCTGCAAGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTCAAAGTGTCTGGGTaGTGGCGGTACTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFKVSG*WRYFFS
Trigger: TGAAAAGAAGTACCGCCAGCACCCAGACACTTTGAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCGGAACCCAGCCAATaGCTTTCATCCATTCAAGGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSEPSQ*LSSIQG
Trigger: ACCTTGAATGGATGAAAGGCATTGGCTGGGTTCCGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACGTTTTGATCCGGCATaGATGTCCATTCATGCAGGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRFDPA*MSIHAG
Trigger: ACCTGCATGAATGGACATGCATGCCGGATCAAAACG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATTCTGAATCTGGCCTaGATGCTCAAACCAAACCAG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKILNLA*MLKPNQ
Trigger: CTGGTTTGGTTTGAGCATGCAGGCCAGATTCAGAAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTCACCAGATCAGCATaGTTGGCTCCAACAATGGGA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFTRSA*LAPTMG
Trigger: TCCCATTGTTGGAGCCAAGCATGCTGATCTGGTGAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACTTCTGCTTCTTGCCTaGAGCTCTGTAGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLLLLA*SSVDQL
Trigger: GAGCTGGTCTACAGAGCTGCAGGCAAGAAGCAGAAG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTGACTTCTGCTTCTTaGCTGCAGCTCTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLTSAS*LQLCRP
Trigger: TGGTCTACAGAGCTGCAGGCAAGAAGCAGAAGTCAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTAAAGATTGACTTCTaGTTCTTGCCTGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVKIDF*FLPAAL
Trigger: CAGAGCTGCAGGCAAGAAGCAGAAGTCAATCTTTAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTCACGTCTTTAGCATaGTTCAAGGCTGTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFTSLA*FKAVVW
Trigger: CCAGACCACAGCCTTGAAGCATGCTAAAGACGTGAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGCTCGGTGGTGGAAATaGTCTGGACGATCAGGAATG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKARWWK*SGRSGM
Trigger: CATTCCTGATCGTCCAGAGCATTTCCACCACCGAGC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTAGGCGTCCTTGGCTaGTTTGATATGAACAGCATC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVGVLG*FDMNSI
Trigger: GATGCTGTTCATATCAAAGCAGCCAAGGACGCCTAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTATTCAAAATCGCTTTaGTGCAGGGATGACTTGGCA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHYSKSL*CRDDLA
Trigger: TGCCAAGTCATCCCTGCAGCAAAGCGATTTTGAATA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGAGCCCTGTGCCAAGTaGTTCTTGACATGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKEPCAK*FLTWSL
Trigger: CAAGGACCATGTCAAGAAGCACTTGGCACAGGGCTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGAGCCCTGTGCCAAGTaGTTCTTGACATGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEEPCAK*FLTWSL
Trigger: CAAGGACCATGTCAAGAAGCACTTGGCACAGGGCTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGCCCTTCCCACGGATaGTTTCCTCTAGATCTTTCC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGPSHG*FPLDLS
Trigger: GGAAAGATCTAGAGGAAAGCATCCGTGGGAAGGGCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTAGGGGAGTCCCCTTaGTCAAGTTCTCTTTGTACA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVGESP*SSSLCT
Trigger: TGTACAAAGAGAACTTGAGCAAGGGGACTCCCCTAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397345.8
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAGGCTGAAGTTCTTTTaGTTCTCCCGGACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRLKFF*FSRTLC
Trigger: ACAGAGAGTCCGGGAGAACCAAAAGAACTTCAGCCT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTACACGCAGTATTTCTaGCGTGTCTTGAACAACTGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHYTQYF*RVLNNC
Trigger: ACAGTTGTTCAAGACACGCCAGAAATACTGCGTGTA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTCACCGAGCTAATGTaGTCCTGTGTTTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFTELM*SCVCFT
Trigger: AGTGAAACAAACACAGGACCACATTAGCTCGGTGAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTTGTGGGAGCTCTGTaGTTTTTGCATGTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVVGAL*FLHVCK
Trigger: CTTACAAACATGCAAAAACCACAGAGCTCCCACAAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGATACCGTTGTCTGTTaGGTAGCAACTGAAGATGAT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHDTVVC*VATEDD
Trigger: ATCATCTTCAGTTGCTACCCAACAGACAACGGTATC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATGGATGAGATGGGATaGAAGATACCGTTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHMDEMG*KIPLSV
Trigger: AACAGACAACGGTATCTTCCATCCCATCTCATCCAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTGCCAGAGCTGGTTTaGAAGTTTCTGATTGCTCAT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVPELV*KFLIAH
Trigger: ATGAGCAATCAGAAACTTCCAAACCAGCTCTGGCAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGATTCTGCGAAGTTCTaGAGTATCTGTTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPDSAKF*SICCAG
Trigger: GCCAGCACAACAGATACTCCAGAACTTCGCAGAATC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCAGTGTGTGTGATATaGGTCCTCCATGCTGCCTAC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEAVCVI*VLHAAY
Trigger: GTAGGCAGCATGGAGGACCCATATCACACACACTGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGTTTCGTGTTGAGCTaGGCTTGCAACAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPCFVLS*ACNSTG
Trigger: TCCTGTACTGTTGCAAGCCCAGCTCAACACGAAACA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTATTCGCGATCACTCTaGTTTTTGGCTGTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHYSRSL*FLAVFK
Trigger: CTTGAAGACAGCCAAAAACCAGAGTGATCGCGAATA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCACTCCTCTGGGCCTaGTTAATTTTAGACTGTACT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSLLWA*LILDCT
Trigger: AGTACAGTCTAAAATTAACCAGGCCCAGAGGAGTGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGCGATATCACTCCTCTaGGCCTGGTTAATTTTAGAC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKAISLL*AWLILD
Trigger: GTCTAAAATTAACCAGGCCCAGAGGAGTGATATCGC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGAACTGGGGCAGGTCTaGTGGCAGGTTGTATTTGTG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKELGQV*WQVVFV
Trigger: CACAAATACAACCTGCCACCAGACCTGCCCCAGTTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGAACTGGGGCAGGTCTaGTGGCAGGTTGTATTTGTG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEELGQV*WQVVFV
Trigger: CACAAATACAACCTGCCACCAGACCTGCCCCAGTTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGCCTGGACCATAACTaGGGAGTCCACAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCLDHN*GVHNAG
Trigger: ACCAGCATTGTGGACTCCCCAGTTATGGTCCAGGCA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTGGTAGCGACATCCTaGGCCATCTTTGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELVATS*AIFAAV
Trigger: CACAGCTGCAAAGATGGCCCAGGATGTCGCTACCAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGGTACTTGGTCTTGCTaGCTTCATAGCCCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKGTWSC*LHSPFC
Trigger: ACAAAAAGGGCTATGAAGCCAGCAAGACCAAGTACC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGTAGTTGGCGTTGGTaGCAACCTCCTGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPCSWRW*QPPEIS
Trigger: AGAAATCTCAGGAGGTTGCCACCAACGCCAACTACA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATGTCCACCGGGGTGTaGAAGGAGGTCTTGGATTTC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKMSTGV*KEVLDF
Trigger: GAAATCCAAGACCTCCTTCCACACCCCGGTGGACAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATATCAGGCATGATGTaGACTTTGGTTTTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHISGMM*TLVLSA
Trigger: GGCTGACAAAACCAAAGTCCACATCATGCCTGATAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTGGTGATGTTGGCTTaGGCATCCTTTGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLVMLA*ASFAAV
Trigger: CACGGCTGCAAAGGATGCCCAAGCCAACATCACCAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATATGTGCATTCTGCTTaGCAAGCACCATGTCCATGG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPYVHSA*QAPCPW
Trigger: CCATGGACATGGTGCTTGCCAAGCAGAATGCACATA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTACTTGTATTCACTaGCAATTTCCCGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCTCIH*QFPGRL
Trigger: AAGCCTCCCGGGAAATTGCCAGTGAATACAAGTACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACAGCCACAATGGGAATaGCATCACTTCTCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKQPQWE*HHFSSH
Trigger: ATGACTTGAGAAGTGATGCCATTCCCATTGTGGCTG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTATTTGTAATCACTaGCAATATCCCGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCICNH*QYPERP
Trigger: AGGCCTCTCGGGATATTGCCAGTGATTACAAATACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGTCACTCTGCACTTTaGCAATGTGGAGGGACCACA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGHSAL*QCGGTT
Trigger: TGTGGTCCCTCCACATTGCCAAAGTGCAGAGTGACC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGTCACTCTGCACTTTaGCAATGTGGAGGGACCACA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGHSAL*QCGGTT
Trigger: TGTGGTCCCTCCACATTGCCAAAGTGCAGAGTGACC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAAATTTCAGCGTTTCTaGACGCTGACGGTAGATAGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHKFQRF*TLTVDS
Trigger: ACTATCTACCGTCAGCGTCCAGAAACGCTGAAATTT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATATCTCTTGAAGCCTTaGCTGCTTGGATTGGAATGG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKYLLKP*LLGLEW
Trigger: CCATTCCAATCCAAGCAGCCAAGGCTTCAAGAGATA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACCTCTACAGAGCCAATaGGAACCCATCCTATGCCTC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEPLQSQ*EPILCL
Trigger: GAGGCATAGGATGGGTTCCCATTGGCTCTGTAGAGG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGATATCTGGGGTGTCTaGCATCACGTGGATGGAGGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKDIWGV*HHVDGG
Trigger: ACCTCCATCCACGTGATGCCAGACACCCCAGATATC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTATATTTATAGTCACTaGCAATCTCCCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHYIYSH*QSPWRP
Trigger: AGGCCTCCAGGGAGATTGCCAGTGACTATAAATATA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCACTGACCAGAGCCTaGGAATTTTTAGAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSLTRA*EFLECR
Trigger: CCTGCACTCTAAAAATTCCCAGGCTCTGGTCAGTGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGACACGGAGTCATTTaGCATCCACCCAATTCCACG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGHGVI*HPPNST
Trigger: CGTGGAATTGGGTGGATGCCAAATGACTCCGTGTCC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGACACGGAGTCATTTaGCATCCACCCAATTCCACG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGHGVI*HPPNST
Trigger: CGTGGAATTGGGTGGATGCCAAATGACTCCGTGTCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTACTTTGATTTGGTaGCATTCCAGTCTTTCCGGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCTLIW*HSSLSG
Trigger: ACCGGAAAGACTGGAATGCCACCAAATCAAAGTACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGGGTGTACTTTGATTTaGTGGCATTCCAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKGCTLI*WHSSLS
Trigger: GGAAAGACTGGAATGCCACCAAATCAAAGTACACCC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTAGTAACCCTTACATaGTCCACAGAATCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLVTLT*STESSG
Trigger: CCCACTGGATTCTGTGGACCATGTAAGGGTTACTAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTTTTCCCATGTCTTTaGAGTGGGAGATATGTGGTG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVFPCL*SGRYVV
Trigger: CACCACATATCTCCCACTCCAAAGACATGGGAAAAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACCAGATCAGCATGCTTaGCTCCAACAATGGGAATGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPPDQHA*LQQWEC
Trigger: ACATTCCCATTGTTGGAGCCAAGCATGCTGATCTGG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGCAGGATGTAGCTGGTaGCTTTCACTCTATCCCAGG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKAGCSW*LSLYPR
Trigger: CCTGGGATAGAGTGAAAGCCACCAGCTACATCCTGC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCAGGATGTAGCTGGTaGCTTTCACTCTATCCCAGG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEAGCSW*LSLYPR
Trigger: CCTGGGATAGAGTGAAAGCCACCAGCTACATCCTGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCCCGATATTTGATATaGCTGGCCAGATGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSRYLI*LARCFW
Trigger: CCAGAAGCATCTGGCCAGCCATATCAAATATCGGGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCACTGACTTTCTTCTaGGAATCCTTGGCAGTAACC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSLTFF*ESLAVT
Trigger: GGTTACTGCCAAGGATTCCCAGAAGAAAGTCAGTGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAACTTGCAAGTCGGGGTaGCAAATCCATTCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTETCKSG*QIHSWR
Trigger: CCTCCACGAATGGATTTGCCACCCCGACTTGCAAGT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAGCCTGCACGTAGACTaGTGTATCTGTGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSLHVD*CICDKL
Trigger: AAGCTTGTCACAGATACACCAGTCTACGTGCAGGCT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCGGACGTGGACAAATaGAACATCTTTGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKPDVDK*NIFGAK
Trigger: CTTGGCCCCAAAGATGTTCCATTTGTCCACGTCCGG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACCGGACGTGGACAAATaGAACATCTTTGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEPDVDK*NIFGAK
Trigger: CTTGGCCCCAAAGATGTTCCATTTGTCCACGTCCGG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTGACTCTCCGGACGTaGACAAATGGAACATCTTTG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLTLRT*TNGTSL
Trigger: CAAAGATGTTCCATTTGTCCACGTCCGGAGAGTCAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACACTTGGGGTGTGTATaGCAGAGAGATCATGTGGCC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKHLGCV*QRDHVA
Trigger: GGCCACATGATCTCTCTGCCATACACACCCCAAGTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACGGCAATGGATCACTTaGGGTGTGTATGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERQWIT*GVYGRE
Trigger: CTCTCTGCCATACACACCCCAAGTGATCCATTGCCG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACGGCAATGGATCACTTaGGGTGTGTATGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRQWIT*GVYGRE
Trigger: CTCTCTGCCATACACACCCCAAGTGATCCATTGCCG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGCTCTGATGAGGATTaGCGTATCTGGAACCGGAGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGSDED*RIWNRS
Trigger: ACTCCGGTTCCAGATACGCCAATCCTCATCAGAGCC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTGACTGCTCGGTGGTaGAAATGCTCTGGACGATCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVTARW*KCSGRS
Trigger: TGATCGTCCAGAGCATTTCCACCACCGAGCAGTCAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTGACTGCTCGGTGGTaGAAATGCTCTGGACGATCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVTARW*KCSGRS
Trigger: TGATCGTCCAGAGCATTTCCACCACCGAGCAGTCAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCAGTGACTGCTCGGTaGTGGAAATGCTCTGGACGA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESVTAR*WKCSGR
Trigger: TCGTCCAGAGCATTTCCACCACCGAGCAGTCACTGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTAGCCTCTGGGTTTaGCCTTGTTGTATTCCAATT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCSLWV*PCCIPI
Trigger: AATTGGAATACAACAAGGCCAAACCCAGAGGCTACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGACATGCAGCAACATaGGTGTGTCGTGGATTGTGG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGHAAT*VCRGLW
Trigger: CCACAATCCACGACACACCCATGTTGCTGCATGTCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCCAGTGGGCTTTGTTaGCTTCGTACTGTTTCTTAT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSSGLC*LRTVSY
Trigger: ATAAGAAACAGTACGAAGCCAACAAAGCCCACTGGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGAGTCCACTTCCAGTaGGCTTTGTTGGCTTCGTAC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGVHFQ*ALLASY
Trigger: GTACGAAGCCAACAAAGCCCACTGGAAGTGGACTCC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTGTCAGGTACGGCATaGCAGGTTCCTCTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVSGTA*QVPLSL
Trigger: CAAGGAAAGAGGAACCTGCCATGCCGTACCTGACAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTGTCAGGTACGGCATaGCAGGTTCCTCTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVSGTA*QVPLSL
Trigger: CAAGGAAAGAGGAACCTGCCATGCCGTACCTGACAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATGTTTCACCTCTGGTaGCTCCAGCATGATGGAGTA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPMFHLW*LQHDGV
Trigger: TACTCCATCATGCTGGAGCCACCAGAGGTGAAACAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGCCTTCTTGATGTCTaGTCGATCAGCCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGLLDV*SISHCG
Trigger: ACCACAGTGGCTGATCGACCAGACATCAAGAAGGCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGCCTTCTTGATGTCTaGTCGATCAGCCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGLLDV*SISHCG
Trigger: ACCACAGTGGCTGATCGACCAGACATCAAGAAGGCC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCTCGGTATTTAACCTaGCTGCTCAGCTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESRYLT*LLSLAA
Trigger: GGCAGCCAAGCTGAGCAGCCAGGTTAAATACCGAGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACCAGATTATCGGGTATaGTGTGGTAGTGGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPPDYRV*CGSGLY
Trigger: GTAAAGGCCACTACCACACCATACCCGATAATCTGG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGACTCTCTGTATCTCTaGGGTGTCCAAAACAGTCTC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPDSLYL*GVQNSL
Trigger: GAGACTGTTTTGGACACCCCAGAGATACAGAGAGTC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACTGTCACCACTGGTGTaGAGCAACCCTTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELSPLV*SNPCVS
Trigger: AGAAACACAAGGGTTGCTTCACACCAGTGGTGACAG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACCTGTAATAGTCTCCTaGTCTTGGTCATTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKPVIVS*SWSFRF
Trigger: AAAACGGAATGACCAAGATCAGGAGACTATTACAGG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACCAGCAGTAGATGGATaGGATGGGATGGAAGATACC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEPAVDG*DGMEDT
Trigger: GGTATCTTCCATCCCATCTCATCCATCTACTGCTGG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGGCATCTCCATCCTTaGAGGACACCTCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKWHLHP*RTPHLH
Trigger: ATGCAGATGAGGTGTCCTTCAAGGATGGAGATGCCA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGGCATCTCCATCCTTaGAGGACACCTCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEWHLHP*RTPHLH
Trigger: ATGCAGATGAGGTGTCCTTCAAGGATGGAGATGCCA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCCTGCAGACAAGTGTaGTGCTTTGAAATGCCTAAA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSCRQV*CFEMPK
Trigger: TTTAGGCATTTCAAAGCATCACACTTGTCTGCAGGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGGGGTCATGAACTTTaGAGGATCCACTTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGGHEL*RIHFLP
Trigger: CGGAAGAAAGTGGATCCTTCAAAGTTCATGACCCCC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACAATGTAGGGGGTCATaGACTTTGAAGGATCCACTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPQCRGS*TLKDPL
Trigger: AAGTGGATCCTTCAAAGTTCATGACCCCCTACATTG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAAGCTGTGGGTTCTCTaGAGCAGGAAGCACATTATA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPKLWVL*SRKHII
Trigger: TATAATGTGCTTCCTGCTTCAGAGAACCCACAGCTT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGAACAGTATCGAGCTTaGATTTGGGGGTCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEEQYRA*IWGSRS
Trigger: ACTGCGAGACCCCCAAATTCAAGCTCGATACTGTTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTTATACTCCCGATCTaGTTGTATCTTGGCCACGTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFILPI*LYLGHV
Trigger: AACGTGGCCAAGATACAATCAGATCGGGAGTATAAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTGGCCTGGAGAAACTaGGGAAGATCAGGACTCATG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELAWRN*GRSGLM
Trigger: CATGAGTCCTGATCTTCCTCAGTTTCTCCAGGCCAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCACTCTGAATTTGATTaGCATTCCTCGTATGCTCAA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHHSEFD*HSSYAQ
Trigger: TTGAGCATACGAGGAATGTCAATCAAATTCAGAGTG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGCTTTGTGTTATGCTaGGCCAACACCATGCCCATG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECFVLC*ANTMPM
Trigger: CATGGGCATGGTGTTGGCTCAGCATAACACAAAGCA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGATCATCCTGAAGACTaGGAAATCCAACTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPDHPED*EIQLAC
Trigger: GCAAGCAAGTTGGATTTCTCAGTCTTCAGGATGATC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTGCAGCTGTCACACTaGCCATATCCAGAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELQLSH*PYPEVC
Trigger: ACACACCTCTGGATATGGTCAGTGTGACAGCTGCAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTGGTGGCAACCTCCTaGGATTTCTTTGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLVATS*DFFAAV
Trigger: GACAGCTGCAAAGAAATCTCAGGAGGTTGCCACCAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTGGTGGCAACCTCCTaGGATTTCTTTGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELVATS*DFFAAV
Trigger: GACAGCTGCAAAGAAATCTCAGGAGGTTGCCACCAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATACAGATTATCACTCTaGATCTGCATGGCATTCCTG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKYRLSL*ICMAFL
Trigger: CAGGAATGCCATGCAGATTCAGAGTGATAATCTGTA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTGTCAGGCATGACATaGATGGTGGTCTTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVSGMT*MVVLSL
Trigger: CAAGGACAAGACCACCATTCATGTCATGCCTGACAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTTCATCGAGTCCATaGGTGTGGAATACTTCAAAG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCSSSP*VWNTSK
Trigger: CTTTGAAGTATTCCACACTCATGGACTCGATGAACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGCTGGCGGTATTTCTaGTCACTGGCATATTCAGTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPCWRYF*SLAYSV
Trigger: AACTGAATATGCCAGTGATCAGAAATACCGCCAGCA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGCACAACATCGTTCTaGTCAGGCAGACATGTCCAC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECTTSF*SGRHVH
Trigger: GTGGACATGTCTGCCTGATCAGAACGATGTTGTGCA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACTTTCCGTGCATGAATaGTGTCATTCTGGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELSVHE*CHSGRA
Trigger: TGCCCGACCAGAATGACATCATTCATGCACGGAAAG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACTTTCCGTGCATGAATaGTGTCATTCTGGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLSVHE*CHSGRA
Trigger: TGCCCGACCAGAATGACATCATTCATGCACGGAAAG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGGATAATGTCGTTTTaGTCCGGCATGCATGTCCAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPWIMSF*SGMHVH
Trigger: ATGGACATGCATGCCGGATCAAAACGACATTATCCA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATATTCTGGGCGTTTTTaGCTCTCAACACTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPYSGRF*LSTLQE
Trigger: CTCCTGAAGTGTTGAGAGTCAAAAACGCCCAGAATA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCGTTCTGGTCAGGATaGCACATCCATTGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESFWSG*HIHWCK
Trigger: CTTGCACCAATGGATGTGTCATCCTGACCAGAACGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATGTGGTGTATCTGGTaGAAACGTATATTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHMWCIW*KRIFAL
Trigger: AAGGGCAAATATACGTTTTCACCAGATACACCACAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATGTCATTGGGGATATaGACATTTGCTTTGGTATCC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHMSLGI*TFALVS
Trigger: GGATACCAAAGCAAATGTTCATATCCCCAATGACAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGATACTCCAGGTCACTaGGGATGTACTGGCACCTTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKDTPGH*GCTGTF
Trigger: AAAGGTGCCAGTACATCCTCAGTGACCTGGAGTATC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTTCTTTTCATAAACTaGTCTGTACAGGCGATCGAT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVLFIN*SVQAID
Trigger: ATCGATCGCCTGTACAGATCAGTTTATGAAAAGAAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGAGCCACTTTGCCTCTaGCACTGTGCACATAGTCAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKEPLCL*HCAHSH
Trigger: ATGACTATGTGCACAGTGTCAGAGGCAAAGTGGCTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGAGCCACTTTGCCTCTaGCACTGTGCACATAGTCAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEEPLCL*HCAHSH
Trigger: ATGACTATGTGCACAGTGTCAGAGGCAAAGTGGCTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTGATGTGTTTGAAGTaGGGAGTGTCACCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLMCLK*GVSPGS
Trigger: ACTTCCAGGTGACACTCCTCACTTCAAACACATCAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTACTTTTTCTCACTaGCCATGTCCTTCACGTCTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCTFSH*PCPSRL
Trigger: AAGACGTGAAGGACATGGTCAGTGAGAAAAAGTACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCTTTTCAGCCAGAGTaGAATCAGGGGTATCATAGG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSFQPE*NQGYHR
Trigger: CCTATGATACCCCTGATTTCACTCTGGCTGAAAAGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACGTCCTTGGCTGCTTTaGTATGAACAGCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRPWLL*YEQHLA
Trigger: AGCCAGATGCTGTTCATATCAAAGCAGCCAAGGACG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGTCCAGATTGGTGTTaGCTTTGTAGGCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESPDWC*LCRRPW
Trigger: CCAAGGACGCCTACAAAGTCAACACCAATCTGGACT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTTTTTGTCATCAGTaGCAGAAAGCTTGCAACCCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCFCHQ*QKACNP
Trigger: AGGGTTGCAAGCTTTCTGTCACTGATGACAAAAACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTATTAAAGTATTCCTaGGGGCGAGCACCGTGTTTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLLKYS*GRAPCF
Trigger: AAAACACGGTGCTCGCCCTCAGGAATACTTTAATAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTAATTTGTATCACTaGCATGCTTGGTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCNLYH*HAWSLP
Trigger: AGGAAGTGACCAAGCATGTCAGTGATACAAATTACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCAGTCACGGGTTTGTaGAGTTTCTTCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSVTGL*SFFRSA
Trigger: GGCTGACCTGAAGAAACTTCACAAACCCGTGACTGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCAGGACATGATTCATaGTCAGAGACTCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSGHDS*SETPSC
Trigger: ACATGAAGGAGTCTCTGATCATGAATCATGTCCTGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTTGTATTCAGGACATaGTTCATGATCAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLVFRT*FMIRDS
Trigger: GGAGTCTCTGATCATGAATCATGTCCTGAATACAAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGAGACTCTTTGGCAGTaGTGTACGTTGGTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPETLWQ*CTLVFQ
Trigger: TTGAAACACCAACGTACATCACTGCCAAAGAGTCTC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTCTCATTGAGGATTTaGGTGGCATTCTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFSLRI*VAFFAL
Trigger: AAGAGCAAAGAATGCCACTCAAATCCTCAATGAGAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTTGTTGGGCATGAATaGTCTCTGGAGTATCAACCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLVGHE*SLEYQP
Trigger: TGGTTGATACTCCAGAGATCATTCATGCCCAACAAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTCCTGTATTTGATCTaGCTGATCTGGTCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEFLYLI*LIWSPA
Trigger: CGCAGGCGACCAGATCAGTCAGATCAAATACAGGAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGGTGTGGGGGTTaGTTTCCCCAGGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEKGCGG*FPQVLF
Trigger: AAAGAGAACCTGGGGAAAGCAACCCCCACACCCTTT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAAAGGGTGTGGGGGTTaGTTTCCCCAGGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKKGCGG*FPQVLF
Trigger: AAAGAGAACCTGGGGAAAGCAACCCCCACACCCTTT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAACAGGTGTCGGAGTTaGTTTTCTCATGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHNRCRS*FSHVLF
Trigger: AAAGAGAACATGAGAAAAGCAACTCCGACACCTGTT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATACATAGGCAGCTTTaGCTTGTATTTGTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHIHRQL*LVFVSG
Trigger: TCCGGAAACAAATACAAGGCAAAGCTGCCTATGTAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATGTCACTGAAGTCCTaGATGTTCTTCTTTACTCGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHMSLKS*MFFFTR
Trigger: ACGAGTAAAGAAGAACATGCAGGACTTCAGTGACAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCTGGTGCTTCTGAATaGTCAGACTTCTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESGASE*SDFSSP
Trigger: GGGTGAGGAGAAGTCTGAGCATTCAGAAGCACCAGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACTGGAGTATCTGTTGTaGTGGCGTATGGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELEYLL*WRMAVL
Trigger: AAGGACAGCCATACGCCAGCACAACAGATACTCCAG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTGCGACACTTTCTTTaGATGTTCAATATCCTTTGC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLRHFL*MFNILC
Trigger: GCAAAGGATATTGAACATGCAAAGAAAGTGTCGCAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAAAACCTTACTGACTTaGTGCGACACTTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHKTLLT*CDTFFA
Trigger: TGCAAAGAAAGTGTCGCAGCAAGTCAGTAAGGTTTT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAAACTGTGGAGCATCTaGTGGTATATGGCACTTGAA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKKLWSI*WYMALE
Trigger: TTCAAGTGCCATATACCAGCAGATGCTCCACAGTTT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAACGTCGCTGGCAATTaGCTGAGATTTCTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPNVAGN*LRFLSL
Trigger: CAAGCTAAGAAATCTCAGGCAATTGCCAGCGACGTT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAAGATATCACTGACTTaGTTCGTGTTCTGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHKISLT*FVFCFA
Trigger: GGCAAAACAGAACACGAAGCAAGTCAGTGATATCTT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCTCGATGCCTTGGCTaGAGTGATGGGAATAGCATC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESRCLG*SDGNSI
Trigger: GATGCTATTCCCATCACTGCAGCCAAGGCATCGAGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCTCGATGCCTTGGCTaGAGTGATGGGAATAGCATC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSRCLG*SDGNSI
Trigger: GATGCTATTCCCATCACTGCAGCCAAGGCATCGAGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTTCTGAAACCCACATaGTTTCCCTTTGACTTCTCA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLLKPT*FPFDFS
Trigger: TGAGAAGTCAAAGGGAAAGCATGTGGGTTTCAGAAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATCAGACTGCAGCTTTaGCACATTCATATAGTGGAC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKIRLQL*HIHIVD
Trigger: GTCCACTATATGAATGTGGCAAAGCTGCAGTCTGAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATGGCATTCCTGGAGTaGTCCACATTCAAGGCATCG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEMAFLE*STFKAS
Trigger: CGATGCCTTGAATGTGGAGCACTCCAGGAATGCCAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATGGCATTCCTGGAGTaGTCCACATTCAAGGCATCG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKMAFLE*STFKAS
Trigger: CGATGCCTTGAATGTGGAGCACTCCAGGAATGCCAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATATTCCCGGTCTGACTaGATCTTGGCCACTTGCATG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEYSRSD*ILATCM
Trigger: CATGCAAGTGGCCAAGATGCAGTCAGACCGGGAATA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTCAAAGTGTCTGGGTaGTGGCGGTACTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFKVSG*WRYFFS
Trigger: TGAAAAGAAGTACCGCCAGCACCCAGACACTTTGAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTTGTCAGCCTCCCATaGTTGTTTGTAGAGATGTTC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFVSLP*LFVEMF
Trigger: GAACATCTCTACAAACAAGCATGGGAGGCTGACAAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAACTGGCATATTCAGTTaGTTTCTTGGCCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPTGIFS*FLGLLH
Trigger: GTGGAGAAGGCCAAGAAAGCAACTGAATATGCCAGT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTTGTTCATGGTATGTaGATTCTGCTTGGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLVHGM*ILLGKH
Trigger: GTGCTTGCCAAGCAGAATGCACATACCATGAACAAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAGTTTTGGGTCATCTTaGAGACTCCGGAATCCAACA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSFGSS*RLRNPT
Trigger: TGTTGGATTCCGGAGTCTGCAAGATGACCCAAAACT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACCGGGAGGCTTTTGCTaGTTTGATTGGTATGGCATC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEPGGFC*FDWYGI
Trigger: GATGCCATACCAATCAAAGCAGCAAAAGCCTCCCGG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCGGGAGGCTTTTGCTaGTTTGATTGGTATGGCATC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKPGGFC*FDWYGI
Trigger: GATGCCATACCAATCAAAGCAGCAAAAGCCTCCCGG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTCCCGGGAGGCTTTTaGTGCTTTGATTGGTATGGC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEFPGGF*CFDWYG
Trigger: GCCATACCAATCAAAGCAGCAAAAGCCTCCCGGGAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATACTCACGGTCACTCTaGACTTTGGCAATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEYSRSL*TLAMWR
Trigger: CCTCCACATTGCCAAAGTGCAGAGTGACCGTGAGTA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATACTCACGGTCACTCTaGACTTTGGCAATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKYSRSL*TLAMWR
Trigger: CCTCCACATTGCCAAAGTGCAGAGTGACCGTGAGTA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGAATTTGAGCTGGTCTaGAGGCTGGCGATACTTCCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKEFELV*RLAILP
Trigger: AGGAAGTATCGCCAGCCTGCAGACCAGCTCAAATTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGCTTCTGTGTATAAATaGTTGCTCATTGTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKASVYK*LLIVRA
Trigger: TGCCCTGACAATGAGCAAGCATTTATACACAGAAGC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCTTGGCCAGCAAGATaGTTAACATGTCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESWPAR*LTCPLG
Trigger: GCCCAGTGGACATGTTAAGCATCTTGCTGGCCAAGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATATGGCTGGCCAGATaGTTCTGGTTCTTGGCGTGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEIWLAR*FWFLAC
Trigger: ACACGCCAAGAACCAGAAGCATCTGGCCAGCCATAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTAAAGATTGACTTCTaGTTCTTGCCTGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVKIDF*FLPAAL
Trigger: CAGAGCTGCAGGCAAGAAGCAGAAGTCAATCTTTAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTAACCTTGCGGACATaGAGCAACATGGGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELTLRT*SNMGVS
Trigger: CGACACACCCATGTTGCTGCATGTCCGCAAGGTTAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTAACCTTGCGGACATaGAGCAACATGGGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLTLRT*SNMGVS
Trigger: CGACACACCCATGTTGCTGCATGTCCGCAAGGTTAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCTGCTCAGCTTGGCTaGCTTCTTGGCCATTTCTAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEAAQLG*LLGHFY
Trigger: ATAGAAATGGCCAAGAAGGCAGCCAAGCTGAGCAGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGCTGCTCAGCTTGGCTaGCTTCTTGGCCATTTCTAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKAAQLG*LLGHFY
Trigger: ATAGAAATGGCCAAGAAGGCAGCCAAGCTGAGCAGC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTTTTAAGGTCACACTaGTATTGGAGAAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFLRSH*YWRRLK
Trigger: CTTCAGCCTTCTCCAATACCAGTGTGACCTTAAAAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTCACCGAGCTAATGTaGTCCTGTGTTTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFTELM*SCVCFT
Trigger: AGTGAAACAAACACAGGACCACATTAGCTCGGTGAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGGCAGGTCAGGGATTaGAGTTCCTTGTCCTATTGC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERQVRD*SSLSYC
Trigger: GCAATAGGACAAGGAACTCCAATCCCTGACCTGCCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCTCTGGAGTCACAGTaGTTGGAATGCCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSLESQ*LECLFP
Trigger: TGGGAACAGGCATTCCAACCACTGTGACTCCAGAGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGGAGTGATAGGTGTTaGGATTCCTTTCCCCAAATT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKWSDRC*DSFPQI
Trigger: AATTTGGGGAAAGGAATCCCAACACCTATCACTCCA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGGATCTGTCACCACTaGTGTGAAGCAACCCTTGTG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRICHH*CEATLV
Trigger: CACAAGGGTTGCTTCACACCAGTGGTGACAGATCCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGATGTTGTCTTCTGCTaGATCATAGTCAAAAACCGA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHDVVFC*IIVKNR
Trigger: TCGGTTTTTGACTATGATCCAGCAGAAGACAACATC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTTGTGGGAGCTCTGTaGTTTTTGCATGTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVVGAL*FLHVCK
Trigger: CTTACAAACATGCAAAAACCACAGAGCTCCCACAAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGATACCGTTGTCTGTTaGGTAGCAACTGAAGATGAT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKDTVVC*VATEDD
Trigger: ATCATCTTCAGTTGCTACCCAACAGACAACGGTATC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTTTCCAGCAGTAGATaGATGAGATGGGATGGAAGA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFSSSR*MRWDGR
Trigger: TCTTCCATCCCATCTCATCCATCTACTGCTGGAAAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTTCCCGAACACCATTaGCTTATACAGACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLPEHH*LIQTFS
Trigger: AGAAAAAGTCTGTATAAGCCAATGGTGTTCGGGAAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTGCCAGAGCTGGTTTaGAAGTTTCTGATTGCTCAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVPELV*KFLIAH
Trigger: ATGAGCAATCAGAAACTTCCAAACCAGCTCTGGCAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGTTGTGCTGGCGTATaGCTGTCCTTTTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPCCAGV*LSFCFL
Trigger: GAGAAAACAAAAGGACAGCCATACGCCAGCACAACA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTGTTCTTAACGGCCTaGACAAGTTCAGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVFLTA*TSSGAS
Trigger: TGATGCCCCTGAACTTGTCCAGGCCGTTAAGAACAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTGTGGAGCATCTGCTaGTATATGGCACTTGAACTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLWSIC*YMALEL
Trigger: AAGTTCAAGTGCCATATACCAGCAGATGCTCCACAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTGTTGGATAAACTGTaGAGCATCTGCTGGTATATG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVLDKL*SICWYM
Trigger: CATATACCAGCAGATGCTCCACAGTTTATCCAACAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGCATTGACTCTGTGTTaGATAAACTGTGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKALTLC*INCGAS
Trigger: AGATGCTCCACAGTTTATCCAACACAGAGTCAATGC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGACTGTACTGTAATTaGAGCATCTTCAATCGAGGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRLYCN*SIFNRG
Trigger: ACCTCGATTGAAGATGCTCCAATTACAGTACAGTCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCACTCCTCTGGGCCTaGTTAATTTTAGACTGTACT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSLLWA*LILDCT
Trigger: AGTACAGTCTAAAATTAACCAGGCCCAGAGGAGTGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGCGATATCACTCCTCTaGGCCTGGTTAATTTTAGAC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPAISLL*AWLILD
Trigger: GTCTAAAATTAACCAGGCCCAGAGGAGTGATATCGC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACTGGGGCAGGTCTGGTaGCAGGTTGTATTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELGQVW*QVVFVN
Trigger: ATTCACAAATACAACCTGCCACCAGACCTGCCCCAG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATACATTGAACATATCATaGGGCGTGTTGTATTTGGAC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHTLNIS*GVLYLD
Trigger: GTCCAAATACAACACGCCCCATGATATGTTCAATGT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAAATTTGAGGGTGTCTaGATGTTGCCTGTACTTCTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHKFEGV*MLPVLL
Trigger: AAGAAGTACAGGCAACATCCAGACACCCTCAAATTT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTGTTCTGTTTTGCCTaGACCATAACTGGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVFCFA*TITGES
Trigger: GGACTCCCCAGTTATGGTCCAGGCAAAACAGAACAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGTAAGCATTGCACTTaGCCTGGAGAAACTGAGGAA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPCKHCT*PGETEE
Trigger: TTCCTCAGTTTCTCCAGGCCAAGTGCAATGCTTACA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATATGCTCAAGACTCATaGCGTCAGGTAGGTATGTGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPYAQDS*RQVGMC
Trigger: ACACATACCTACCTGACGCCATGAGTCTTGAGCATA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTTTGCAGCAACAATTaGGATGGCATCTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFCSNN*DGIWSQ
Trigger: TTGAGACCAGATGCCATCCCAATTGTTGCTGCAAAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGAGGTGTGTGGTACTTaGTCTTGCTGGCTTCATAGC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKEVCGT*SCWLHS
Trigger: GCTATGAAGCCAGCAAGACCAAGTACCACACACCTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATGACTGTCTGTAGTTaGCGTTGGTGGCAACCTCCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEMTVCS*RWWQPP
Trigger: AGGAGGTTGCCACCAACGCCAACTACAGACAGTCAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCTGCATGGCATTCCTaGAGTGCTCCACATTCAAGG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSAWHS*SAPHSR
Trigger: CCTTGAATGTGGAGCACTCCAGGAATGCCATGCAGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACACTCTGAATCTGCATaGCATTCCTGGAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEHSESA*HSWSAP
Trigger: TGGAGCACTCCAGGAATGCCATGCAGATTCAGAGTG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACACTCTGAATCTGCATaGCATTCCTGGAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKHSESA*HSWSAP
Trigger: TGGAGCACTCCAGGAATGCCATGCAGATTCAGAGTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGCTTCTCGGGGTGCTaGCGATACTTCTTCTCACTA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSFSGC*RYFFSL
Trigger: TAGTGAGAAGAAGTATCGCCAGCACCCCGAGAAGCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCACGTTCCTGTAGTTaGCATTGGTGGCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESRSCS*HWWPLP
Trigger: AGGAAGTGGCCACCAATGCCAACTACAGGAACGTGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACCAATTCAAAGCTCATaGCATCAGGAAGCATGTTGT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKPIQSS*HQEACC
Trigger: ACAACATGCTTCCTGATGCCATGAGCTTTGAATTGG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGGAATGGACTAATTTaGGATCATCCTCGAGACTGC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPWNGLI*DHPRDC
Trigger: GCAGTCTCGAGGATGATCCCAAATTAGTCCATTCCA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAATGTTCATTGCATCTaGAAGGAGGATGTACTTGTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHNVHCI*KEDVLV
Trigger: CACAAGTACATCCTCCTTCCAGATGCAATGAACATT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTCAGCTTCTTAAACTaGAAGTTGCTCGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVSFLN*KLLGCW
Trigger: CCAGCACCCGAGCAACTTCCAGTTTAAGAAGCTGAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGAACTTGTTTCTGTCTaGAGGCTGACGATATTTCTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHELVSV*RLTIFL
Trigger: AAGAAATATCGTCAGCCTCCAGACAGAAACAAGTTC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGTACTTGTATTCACTaGCAATTTCCCGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPCTCIH*QFPGRL
Trigger: AAGCCTCCCGGGAAATTGCCAGTGAATACAAGTACA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGGTCACTCAAAATCTaGGTGGCTCGTTTATTTTTC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHWSLKI*VARLFF
Trigger: GAAAAATAAACGAGCCACCCAGATTTTGAGTGACCA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCTTGGCTTCTTCCATaGCCTGACGATAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESWLLP*PDDRGS
Trigger: AGAGCCTCTATCGTCAGGCCATGGAAGAAGCCAAGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCTTGGCTTCTTCCATaGCCTGACGATAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSWLLP*PDDRGS
Trigger: AGAGCCTCTATCGTCAGGCCATGGAAGAAGCCAAGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTATTTGTAATCACTaGCAATATCCCGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCICNH*QYPERP
Trigger: AGGCCTCTCGGGATATTGCCAGTGATTACAAATACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGGACCACATTATCTTaGGGTCATCGTGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGTTLS*GHRVLL
Trigger: GAGCAGTACACGATGACCCCAAGATAATGTGGTCCC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGCACTTTGGCAATGTaGAGGGACCACATTATCTTG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPCTLAM*RDHIIL
Trigger: CAAGATAATGTGGTCCCTCCACATTGCCAAAGTGCA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAGGTCTGACACTTCTTaGCCAAAACGATACCAAGCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRSDTS*PKRYQA
Trigger: TGCTTGGTATCGTTTTGGCCAAGAAGTGTCAGACCT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACTTGGCTGCTTGGATTaGAATGGCATCCAGACGCAA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLGCLD*NGIQTQ
Trigger: TTGCGTCTGGATGCCATTCCAATCCAAGCAGCCAAG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATATCTCTTGAAGCCTTaGCTGCTTGGATTGGAATGG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPYLLKP*LLGLEW
Trigger: CCATTCCAATCCAAGCAGCCAAGGCTTCAAGAGATA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACATGTGAATTTGAGCTaGTCTGCAGGCTGGCGATAC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEHVNLS*SAGWRY
Trigger: GTATCGCCAGCCTGCAGACCAGCTCAAATTCACATG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGGCAGAATTACTCTTaGCCAGCAGGATATCTGGGG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKWQNYS*PAGYLG
Trigger: CCCCAGATATCCTGCTGGCCAAGAGTAATTCTGCCA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGTATTTGTAGTCACTaGCGATGTCCCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECICSH*RCPWRP
Trigger: AGGCCTCCAGGGACATCGCCAGTGACTACAAATACA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAAGTCTGACATTTCTTaGCCAGCAAGATGCTTAACA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHKSDIS*PARCLT
Trigger: TGTTAAGCATCTTGCTGGCCAAGAAATGTCAGACTT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATATATTTATAGTCACTaGCAATCTCCCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKYIYSH*QSPWRP
Trigger: AGGCCTCCAGGGAGATTGCCAGTGACTATAAATATA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATACTCTCGTTCATTCTaGAGCTTGTCAGCTATGAGG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPYSRSF*SLSAMR
Trigger: CCTCATAGCTGACAAGCTCCAGAATGAACGAGAGTA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTACTTTGATTTGGTaGCATTCCAGTCTTTCCGGT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCTLIW*HSSLSG
Trigger: ACCGGAAAGACTGGAATGCCACCAAATCAAAGTACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGGTGTACTTTGATTTaGTGGCATTCCAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGCTLI*WHSSLS
Trigger: GGAAAGACTGGAATGCCACCAAATCAAAGTACACCC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTAGTAACCCTTACATaGTCCACAGAATCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLVTLT*STESSG
Trigger: CCCACTGGATTCTGTGGACCATGTAAGGGTTACTAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCTTGGCTCCAACAATaGGAATGTAGCGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEAWLQQ*ECSAHP
Trigger: TGGATGAGCGCTACATTCCCATTGTTGGAGCCAAGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGCTTGGCTCCAACAATaGGAATGTAGCGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKAWLQQ*ECSAHP
Trigger: TGGATGAGCGCTACATTCCCATTGTTGGAGCCAAGC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCACTGAGGATGTACTaGCACCTTTTAGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSLRMY*HLLAST
Trigger: CGTGCTGGCTAAAAGGTGCCAGTACATCCTCAGTGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCACTCAAGATCTCCTaGGCGTTTCGGACGCGTATA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESLKIS*AFRTRI
Trigger: TATACGCGTCCGAAACGCCCAGGAGATCTTGAGTGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAAGGCAGGATGTAGCTaGTGGCTTTCACTCTATCCC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKKAGCS*WLSLYP
Trigger: GGGATAGAGTGAAAGCCACCAGCTACATCCTGCCTT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGATCATAAGCATGCTTaGCATGGAGGATTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPDHKHA*HGGFQE
Trigger: CTCCTGAAATCCTCCATGCCAAGCATGCTTATGATC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACACGGTTTTGGTAGTTaGAGCCACTTTGCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKHGFGS*SHFASD
Trigger: GTCAGAGGCAAAGTGGCTCCAACTACCAAAACCGTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACACGGTTTTGGTAGTTaGAGCCACTTTGCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEHGFGS*SHFASD
Trigger: GTCAGAGGCAAAGTGGCTCCAACTACCAAAACCGTG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTGAGGAGTGTCACCTaGAAGTCTATATCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVRSVT*KSISSG
Trigger: CCCACTGGATATAGACTTCCAGGTGACACTCCTCAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTATACCCATATGCCTTaGTGTGTTCATAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHYTHMP*CVHRLL
Trigger: AAGAAGCCTATGAACACACCAAGGCATATGGGTATA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTGACTCTCCGGACGTaGACAAATGGAACATCTTTG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLTLRT*TNGTSL
Trigger: CAAAGATGTTCCATTTGTCCACGTCCGGAGAGTCAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGTGTCTTCTTGACTTaGCGGATCTCAGGGGTATCG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECVFLT*RISGVS
Trigger: CGATACCCCTGAGATCCGCCAAGTCAAGAAGACACA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGCAGAGAGATCATGTaGCCCTGCATCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGREIM*PCILKK
Trigger: CTTCTTCAAGATGCAGGGCCACATGATCTCTCTGCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCTTCTGCCCTCGCTTaGCTCTTAAAAGATCAGGAG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEASALA*LLKDQE
Trigger: CTCCTGATCTTTTAAGAGCCAAGCGAGGGCAGAAGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGCTTCTGCCCTCGCTTaGCTCTTAAAAGATCAGGAG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKASALA*LLKDQE
Trigger: CTCCTGATCTTTTAAGAGCCAAGCGAGGGCAGAAGC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGGGTCTCTCTTTGGTaGCAAGTTCAACATACAGAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGVSLW*QVQHTD
Trigger: ATCTGTATGTTGAACTTGCCACCAAAGAGAGACCCC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACATGCTTCAAGGCTGTaGTCTGGTTTCCAGCGTGAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKHASRL*SGFQRD
Trigger: ATCACGCTGGAAACCAGACCACAGCCTTGAAGCATG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGAGGATTGGCGTATCTaGAACCGGAGTGTACTTGTC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEEDWRI*NRSVLV
Trigger: GACAAGTACACTCCGGTTCCAGATACGCCAATCCTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGCATCTTTCACCGTGTaGTATTTCCCTTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKASFTV*YFPLVF
Trigger: AAAGACCAAAGGGAAATACCACACGGTGAAAGATGC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACTGGACGATCAGGAATaGACCTCCAGATACCCAACT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELDDQE*TSRYPT
Trigger: AGTTGGGTATCTGGAGGTCCATTCCTGATCGTCCAG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTGGTGGAAATGCTCTaGACGATCAGGAATGGACCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVVEML*TIRNGP
Trigger: AGGTCCATTCCTGATCGTCCAGAGCATTTCCACCAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTGGTGGAAATGCTCTaGACGATCAGGAATGGACCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVVEML*TIRNGP
Trigger: AGGTCCATTCCTGATCGTCCAGAGCATTTCCACCAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTAGCCTCTGGGTTTaGCCTTGTTGTATTCCAATT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCSLWV*PCCIPI
Trigger: AATTGGAATACAACAAGGCCAAACCCAGAGGCTACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTGTGGTGTAGCCTCTaGGTTTGGCCTTGTTGTATT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLWCSL*VWPCCI
Trigger: AATACAACAAGGCCAAACCCAGAGGCTACACCACAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAAGTGCTTCTTGACATaGTCCTTGTACTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHKCFLT*SLYLFS
Trigger: TGAGAACAAGTACAAGGACCATGTCAAGAAGCACTT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGCATGTTTCACCTCTaGTGGCTCCAGCATGATGGA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESMFHL*WLQHDG
Trigger: TCCATCATGCTGGAGCCACCAGAGGTGAAACATGCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTACTCTGTAATTCTGTaGCCTCTTTTAGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHYSVIL*PLLGEA
Trigger: AGCTTCACCTAAAAGAGGCCACAGAATTACAGAGTA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTTCAAAGTCCAGCATaGGTTTTCCTCGTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFQSPA*VFLVPF
Trigger: AAAAGGAACGAGGAAAACCCATGCTGGACTTTGAAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGCAGTGATGTACGTTaGTGTTTCAAAGTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGSDVR*CFKVQH
Trigger: ATGCTGGACTTTGAAACACCAACGTACATCACTGCC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAATCCGGAGTTTCATTaGCCATGGCATTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTENPEFH*PWHSGL
Trigger: GAGGCCTGAATGCCATGGCCAATGAAACTCCGGATT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAATCCGGAGTTTCATTaGCCATGGCATTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKNPEFH*PWHSGL
Trigger: GAGGCCTGAATGCCATGGCCAATGAAACTCCGGATT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGGCATGAATGATCTCTaGAGTATCAACCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKGMNDL*SINHRS
Trigger: ACTTCTGTGGTTGATACTCCAGAGATCATTCATGCC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCTCATAATACGACATaGACTTCTCAGCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSHNTT*TSQHLP
Trigger: AGGAAGATGCTGAGAAGTCCATGTCGTATTATGAGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGTATTGGAGAAGGCTaGAGTTCTTTTGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGIGEG*SSFGSP
Trigger: GGGAGAACCAAAAGAACTTCAGCCTTCTCCAATACC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATTTCTGGCGTGTCTTaGACAACTGTAATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHISGVS*TTVIFP
Trigger: AGGAAAAATTACAGTTGTTCAAGACACGCCAGAAAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGAGCTGAAATTCTTCTaGTTTTCTTTTACACGCAGT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHELKFF*FSFTRS
Trigger: ACTGCGTGTAAAAGAAAATCAGAAGAATTTCAGCTC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATGATATTTCACCGTTaGGATGTGCCGTTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEMIFHR*DVPLGL
Trigger: GAGACCCAACGGCACATCTCAACGGTGAAATATCAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTCTCAAAGTCTTCATaGTATTTCACCGTTGAGATG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFSKSS*YFTVEM
Trigger: CATCTCAACGGTGAAATATCATGAAGACTTTGAGAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACCTGTAATAGTCTCCTaGTCTTGGTCATTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPPVIVS*SWSFRF
Trigger: AAAACGGAATGACCAAGATCAGGAGACTATTACAGG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATGTTTGTAAGCTGTTaGGACTGCAAAGACACCCCC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEMFVSC*DCKDTP
Trigger: GGGGGTGTCTTTGCAGTCTCAACAGCTTACAAACAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCAGCAAGGAAAAGGTaGACATCTCTGCTATTTTTC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSARKR*TSLLFF
Trigger: GAAAAATAGCAGAGATGTTCACCTTTTCCTTGCTGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTATAAAACCTTACTaGCTTGCTGCGACACTTTCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCIKPY*LAATLS
Trigger: AGAAAGTGTCGCAGCAAGTCAGTAAGGTTTTATACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTTATACTCCCGATCTaGTTGTATCTTGGCCACGTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFILPI*LYLGHV
Trigger: AACGTGGCCAAGATACAATCAGATCGGGAGTATAAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACACTCTGAATTTGATTaGCATTCCTCGTATGCTCAA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKHSEFD*HSSYAQ
Trigger: TTGAGCATACGAGGAATGTCAATCAAATTCAGAGTG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATCCAATGCCCTTCATaGAGTCAGCATAGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEIQCPS*SQHSQP
Trigger: AGGCTGACTATGCTGACTTCATGAAGGGCATTGGAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATCCAATGCCCTTCATaGAGTCAGCATAGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKIQCPS*SQHSQP
Trigger: AGGCTGACTATGCTGACTTCATGAAGGGCATTGGAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGTTCATCGAGTCCATaGGTGTGGAATACTTCAAAG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPCSSSP*VWNTSK
Trigger: CTTTGAAGTATTCCACACTCATGGACTCGATGAACA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGAATTGCATCAGGTCTaGGATCATAGCCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKELHQV*DHSLSF
Trigger: AAAAGAAAGGCTATGATCTCAGACCTGATGCAATTC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACATCAGGAATGCTGGTaGACTTGTTTCTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEHQECW*TCFCLE
Trigger: CTCCAGACAGAAACAAGTTCACCAGCATTCCTGATG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGCCTTCTTTGTACTTaGATTCACTTGCAATATCTC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSLLCT*IHLQYL
Trigger: GAGATATTGCAAGTGAATTCAAGTACAAAGAAGGCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCATCCATTCAAGGTCTaGCTTATACAAATTGTCACT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHHPFKV*LIQIVT
Trigger: AGTGACAATTTGTATAAGTCAGACCTTGAATGGATG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTATCAGGCATGACATaGATAGTTTTCTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVSGMT*IVFLSL
Trigger: CAATGACAAGAAAACTATTCATGTCATGCCTGATAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGTAATCCATGTCACTaGCCAGAGCCTGGGAATTTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGNPCH*PEPGNF
Trigger: AAAATTCCCAGGCTCTGGTCAGTGACATGGATTACC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGTAATCCATGTCACTaGCCAGAGCCTGGGAATTTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGNPCH*PEPGNF
Trigger: AAAATTCCCAGGCTCTGGTCAGTGACATGGATTACC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGTGAGGGTGTACTTTaGTTTGGTGGCATTCCAGTC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCEGVL*FGGIPV
Trigger: GACTGGAATGCCACCAAATCAAAGTACACCCTCACA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGATAATCAATATCACTaGCAAGGGTCTGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKDNQYH*QGSAPA
Trigger: AGCAGGGGCAGACCCTTGTCAGTGATATTGATTATC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATGTGGTGTATCTGGTaGAAACGTATATTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKMWCIW*KRIFAL
Trigger: AAGGGCAAATATACGTTTTCACCAGATACACCACAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACTTTTAGCCAGCACGTaGTTCATCATGTCATTGGGG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLLAST*FIMSLG
Trigger: CCCCAATGACATGATGAATCACGTGCTGGCTAAAAG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTTCTTTTCATAAACTaGTCTGTACAGGCGATCGAT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVLFIN*SVQAID
Trigger: ATCGATCGCCTGTACAGATCAGTTTATGAAAAGAAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGTAATCAATCTCACTaGCTTTCTTCTGGGAATCCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGNQSH*LSSGNP
Trigger: AGGATTCCCAGAAGAAAGTCAGTGAGATTGATTACC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTGACTTTCCTGACGTaGTCATTGACTTGCAAGTCG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVTFLT*SLTCKS
Trigger: CGACTTGCAAGTCAATGATCACGTCAGGAAAGTCAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTGACTTTCCTGACGTaGTCATTGACTTGCAAGTCG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVTFLT*SLTCKS
Trigger: CGACTTGCAAGTCAATGATCACGTCAGGAAAGTCAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTGCCAAGTGCTTCTTaGCATGGTCCTTGTACTTGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVPSAS*HGPCTC
Trigger: ACAAGTACAAGGACCATGTCAAGAAGCACTTGGCAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTAATTTGTATCACTaGCATGCTTGGTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCNLYH*HAWSLP
Trigger: AGGAAGTGACCAAGCATGTCAGTGATACAAATTACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTTGTATTCAGGACATaGTTCATGATCAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLVFRT*FMIRDS
Trigger: GGAGTCTCTGATCATGAATCATGTCCTGAATACAAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTCTCATTGAGGATTTaGGTGGCATTCTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFSLRI*VAFFAL
Trigger: AAGAGCAAAGAATGCCACTCAAATCCTCAATGAGAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTGACTTGTTGGGCATaGATGATCTCTGGAGTATCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLTCWA*MISGVS
Trigger: TGATACTCCAGAGATCATTCATGCCCAACAAGTCAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTACTTTTTCTGGCTTaGAAGATTCTTGACTTGTTG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVLFLA*KILDLL
Trigger: CAACAAGTCAAGAATCTTTCAAGCCAGAAAAAGTAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGAGCTAATGTGCTTCTaGGTCTCCTTCACACGTTTC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKELMCF*VSFTRF
Trigger: GAAACGTGTGAAGGAGACGCAGAAGCACATTAGCTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCACAGTGGTTGGAATaGCTGTTCCCAAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSQWLE*LFPSFL
Trigger: AAGAAAACTTGGGAACAGGCATTCCAACCACTGTGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATACATAGGCAGCTTTaGCTTGTATTTGTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKIHRQL*LVFVSG
Trigger: TCCGGAAACAAATACAAGGCAAAGCTGCCTATGTAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGAAGGACACCTCATCTaGATCAGCAGCCATATAGTC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKEGHLI*ISSHIV
Trigger: GACTATATGGCTGCTGATGCAGATGAGGTGTCCTTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGAAGGACACCTCATCTaGATCAGCAGCCATATAGTC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEEGHLI*ISSHIV
Trigger: GACTATATGGCTGCTGATGCAGATGAGGTGTCCTTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACCAGCCTTCATCAATTaGTTGAACATTTATGATGGC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKPAFIN*LNIYDG
Trigger: GCCATCATAAATGTTCAAGCAATTGATGAAGGCTGG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACATTTTCTGACTGTGTaGAATGTAGGGGGTCATGAA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPHFLTV*NVGGHE
Trigger: TTCATGACCCCCTACATTGCACACAGTCAGAAAATG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTGCGACACTTTCTTTaGATGTTCAATATCCTTTGC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLRHFL*MFNILC
Trigger: GCAAAGGATATTGAACATGCAAAGAAAGTGTCGCAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAACCTTACTGACTTGCTaGGACACTTTCTTTGCATGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPTLLTC*DTFFAC
Trigger: ACATGCAAAGAAAGTGTCGCAGCAAGTCAGTAAGGT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTGTCTTCCCAGTTCTaGTTGTATAAAACCTTACTG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVSSQF*LYKTLL
Trigger: CAGTAAGGTTTTATACAAGCAGAACTGGGAAGACAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAGGAGAATCAGTGACTaGCGTGAATTTGGTCTTATC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRRISD*REFGLI
Trigger: GATAAGACCAAATTCACGGCAGTCACTGATTCTCCT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTGTTGAGCTGGGCTTaGAACAGTACAGGAGAATCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVLSWA*NSTGES
Trigger: TGATTCTCCTGTACTGTTGCAAGCCCAGCTCAACAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTGTTGAGCTGGGCTTaGAACAGTACAGGAGAATCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVLSWA*NSTGES
Trigger: TGATTCTCCTGTACTGTTGCAAGCCCAGCTCAACAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGTCATATCCCTTCTTaGTCAAGTCTTTCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGHIPS*SSLSSL
Trigger: CAGACTTGAAAGACTTGAGCAAGAAGGGATATGACC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTATCACTCTGTATCTaGATCATGTTCTTAGACAGC +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLSLCI*IMFLDS
Trigger: GCTGTCTAAGAACATGATGCAGATACAGAGTGATAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACGCCCAGCACATTGTTaGCCTTGGCTATTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRPAHC*PWLLSH
Trigger: ATGACTTAATAGCCAAGGGCAACAATGTGCTGGGCG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTTCTGAAACCCACATaGTTTCCCTTTGACTTCTCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLLKPT*FPFDFS
Trigger: TGAGAAGTCAAAGGGAAAGCATGTGGGTTTCAGAAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATCCTGGGCCATCTTTaGAGCTGTGATGCTAACCAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEILGHL*SCDANH
Trigger: ATGGTTAGCATCACAGCTGCAAAGATGGCCCAGGAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATCCTGGGCCATCTTTaGAGCTGTGATGCTAACCAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKILGHL*SCDANH
Trigger: ATGGTTAGCATCACAGCTGCAAAGATGGCCCAGGAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTGACGGTATCTGGGTaGTGTCGATACTTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELTVSG*CRYFLS
Trigger: TGAGAGGAAGTATCGACAGCACCCAGATACCGTCAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTGACGGTATCTGGGTaGTGTCGATACTTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLTVSG*CRYFLS
Trigger: TGAGAGGAAGTATCGACAGCACCCAGATACCGTCAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTTACTCTTGTTAAGTaGCTGTTCCATTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVTLVK*LFHCVH
Trigger: ATGGACACAATGGAACAGGCACTTAACAAGAGTAAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTCTCTAGAGGCTCTTaGAGCCTTTATTGCAATGGC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVSRGS*SLYCNG
Trigger: GCCATTGCAATAAAGGCTGCAAGAGCCTCTAGAGAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGCATCTTAGCCACTTaGATGGAATGGACTAATTTG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCILAT*MEWTNL
Trigger: CAAATTAGTCCATTCCATGCAAGTGGCTAAGATGCA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACAGCTCAATGTTCATTaGATCTGGAAGGAGGATGTA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPQLNVH*IWKEDV
Trigger: TACATCCTCCTTCCAGATGCAATGAACATTGAGCTG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCATTATCACTCTGTATaGGATTCATATTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHHYHSV*DSYSWS
Trigger: TGACCAGGAATATGAATCGCATACAGAGTGATAATG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATGGTATGTGCATTCTaGTTGGCAAGCACCATGTCC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEMVCAF*LASTMS
Trigger: GGACATGGTGCTTGCCAAGCAGAATGCACATACCAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTTGGCATTTGTCTTTaGCAGAACTATATCCATGGC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFGICL*QNYIHG
Trigger: GCCATGGATATAGTTCTGGCAAAGACAAATGCCAAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTACTTGAATTCACTTaGAATATCTCTGGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVLEFT*NISGGL
Trigger: AAGGCCTCCAGAGATATTGCAAGTGAATTCAAGTAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTTCAGTTGCCCTTTTaGATTTTTCCACATCCAAAG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFQLPF*IFPHPK
Trigger: CTTTGGATGTGGAAAAATGCAAAAGGGCAACTGAAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGATTTTGTTCTGCCTTaGCAACATAATCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKDFVLP*QHNLWC
Trigger: ACACCAGAGATTATGTTGGCAAGGCAGAACAAAATC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGCATGTCCACTGGGCTaGTGTACCTTGTCTTGTATT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKACPLG*CTLSCI
Trigger: AATACAAGACAAGGTACAGCAGCCCAGTGGACATGC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCATGTCCACTGGGCTaGTGTACCTTGTCTTGTATT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEACPLG*CTLSCI
Trigger: AATACAAGACAAGGTACAGCAGCCCAGTGGACATGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTCATAGGCTTTCCGTaGATGAATGATGTCATTCTG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVIGFP*MNDVIL
Trigger: CAGAATGACATCATTCATGCACGGAAAGCCTATGAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGCTTCTGTGTATAAATaGTTGCTCATTGTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPASVYK*LLIVRA
Trigger: TGCCCTGACAATGAGCAAGCATTTATACACAGAAGC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTCACCAGATCAGCATaGTTGGCTCCAACAATGGGA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEFTRSA*LAPTMG
Trigger: TCCCATTGTTGGAGCCAAGCATGCTGATCTGGTGAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTCACCAGATCAGCATaGTTGGCTCCAACAATGGGA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFTRSA*LAPTMG
Trigger: TCCCATTGTTGGAGCCAAGCATGCTGATCTGGTGAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGGGATATGAACATTTaGTTTGGTATCCTCATAATG +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGDMNI*FGILIM
Trigger: CATTATGAGGATACCAAAGCAAATGTTCATATCCCC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACCTTGTACAGGTTACTaGTGTAAAGATTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKPCTGY*CKDSSG
Trigger: ACCTGAAGAATCTTTACAGCAGTAACCTGTACAAGG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAAGTGTATACCCATATaGCTTGGTGTGTTCATAGGC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPKCIPI*LGVFIG
Trigger: GCCTATGAACACACCAAGGCATATGGGTATACACTT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTGACTTCTGCTTCTTaGCTGCAGCTCTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLTSAS*LQLCRP
Trigger: TGGTCTACAGAGCTGCAGGCAAGAAGCAGAAGTCAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTGACTTCTGCTTCTTaGCTGCAGCTCTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELTSAS*LQLCRP
Trigger: TGGTCTACAGAGCTGCAGGCAAGAAGCAGAAGTCAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTCACGTCTTTAGCATaGTTCAAGGCTGTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEFTSLA*FKAVVW
Trigger: CCAGACCACAGCCTTGAAGCATGCTAAAGACGTGAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTAGGCGTCCTTGGCTaGTTTGATATGAACAGCATC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVGVLG*FDMNSI
Trigger: GATGCTGTTCATATCAAAGCAGCCAAGGACGCCTAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATATTCAAAATCGCTTTaGTGCAGGGATGACTTGGCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPYSKSL*CRDDLA
Trigger: TGCCAAGTCATCCCTGCAGCAAAGCGATTTTGAATA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGGCTGAAGTTCTTTTaGTTCTCCCGGACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERLKFF*FSRTLC
Trigger: ACAGAGAGTCCGGGAGAACCAAAAGAACTTCAGCCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGGCTGAAGTTCTTTTaGTTCTCCCGGACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRLKFF*FSRTLC
Trigger: ACAGAGAGTCCGGGAGAACCAAAAGAACTTCAGCCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGTAAGCTTCGGGACTaGATGTTGTCTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCKLRD*MLSSAG
Trigger: TCCAGCAGAAGACAACATCCAGTCCCGAAGCTTACA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTTGTGGGAGCTCTGTaGTTTTTGCATGTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVVGAL*FLHVCK
Trigger: CTTACAAACATGCAAAAACCACAGAGCTCCCACAAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATGGATGAGATGGGATaGAAGATACCGTTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPMDEMG*KIPLSV
Trigger: AACAGACAACGGTATCTTCCATCCCATCTCATCCAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTTTCCAGCAGTAGATaGATGAGATGGGATGGAAGA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFSSSR*MRWDGR
Trigger: TCTTCCATCCCATCTCATCCATCTACTGCTGGAAAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACCATATAGTCATACATaGCACGGAAGATTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKPYSHT*HGRFFQ
Trigger: CTGGAAAAATCTTCCGTGCCATGTATGACTATATGG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGCAAATTCTATATCTaGAGGATCAGCCAGAGGCGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGKFYI*RISQRR
Trigger: ACGCCTCTGGCTGATCCTCCAGATATAGAATTTGCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGCATTGACTTTGTGCTaGATAAAAGCAGGAGTATCA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKALTLC*IKAGVS
Trigger: TGATACTCCTGCTTTTATCCAGCACAAAGTCAATGC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGTTTCGTGTTGAGCTaGGCTTGCAACAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCFVLS*ACNSTG
Trigger: TCCTGTACTGTTGCAAGCCCAGCTCAACACGAAACA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTGTTGGATAAACTGTaGAGCATCTGCTGGTATATG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVLDKL*SICWYM
Trigger: CATATACCAGCAGATGCTCCACAGTTTATCCAACAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATATTCGCGATCACTCTaGTTTTTGGCTGTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPYSRSL*FLAVFK
Trigger: CTTGAAGACAGCCAAAAACCAGAGTGATCGCGAATA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATATAATCAACGTCGCTaGCAATTGCCTGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKYNQRR*QLPEIS
Trigger: AGAAATCTCAGGCAATTGCCAGCGACGTTGATTATA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGGGCGTGTTGTATTTaGACTTTGTCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGACCI*TLSSHS
Trigger: ACTATGAGAAGACAAAGTCCAAATACAACACGCCCC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGAACTTGACGGTATCTaGGTGCTGTCGATACTTCCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEELDGI*VLSILP
Trigger: AGGAAGTATCGACAGCACCCAGATACCGTCAAGTTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGAACTTGACGGTATCTaGGTGCTGTCGATACTTCCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKELDGI*VLSILP
Trigger: AGGAAGTATCGACAGCACCCAGATACCGTCAAGTTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAATTGGGATGGCATCTaGTCTCAAATCATAGCCCTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPNWDGI*SQIIAL
Trigger: AAGGGCTATGATTTGAGACCAGATGCCATCCCAATT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACAGCAACAATTGGGATaGCATCTGGTCTCAAATCAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPQQQLG*HLVSNH
Trigger: ATGATTTGAGACCAGATGCCATCCCAATTGTTGCTG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTTTGCAGCAACAATTaGGATGGCATCTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFCSNN*DGIWSQ
Trigger: TTGAGACCAGATGCCATCCCAATTGTTGCTGCAAAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATATCCAGAGGTGTGTaGTACTTGGTCTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKISRGV*YLVLLA
Trigger: AGCCAGCAAGACCAAGTACCACACACCTCTGGATAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATATCCAGAGGTGTGTaGTACTTGGTCTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEISRGV*YLVLLA
Trigger: AGCCAGCAAGACCAAGTACCACACACCTCTGGATAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGTAGTTGGCGTTGGTaGCAACCTCCTGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCSWRW*QPPEIS
Trigger: AGAAATCTCAGGAGGTTGCCACCAACGCCAACTACA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACAATGTGTTTCCCTTTaGCTTGTTCATAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKQCVSL*LVHRLS
Trigger: AGAAAGCCTATGAACAAGCCAAAGGGAAACACATTG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATATCAGGCATGATGTaGACTTTGGTTTTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPISGMM*TLVLSA
Trigger: GGCTGACAAAACCAAAGTCCACATCATGCCTGATAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGTATTTCTGATCACTaGCATATTCAGTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGISDH*HIQLLS
Trigger: AGAAAGCAACTGAATATGCCAGTGATCAGAAATACC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATATGTGCATTCTGCTTaGCAAGCACCATGTCCATGG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEYVHSA*QAPCPW
Trigger: CCATGGACATGGTGCTTGCCAAGCAGAATGCACATA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGACAACACAAGTTTTaGGTCATCTTGCAGACTCCG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGQHKF*VILQTP
Trigger: CGGAGTCTGCAAGATGACCCAAAACTTGTGTTGTCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGAACTTGTTTCTGTCTaGAGGCTGACGATATTTCTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKELVSV*RLTIFL
Trigger: AAGAAATATCGTCAGCCTCCAGACAGAAACAAGTTC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTTTGCTGCTTTGATTaGTATGGCATCAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFCCFD*YGINRK
Trigger: CTTCCTGTTGATGCCATACCAATCAAAGCAGCAAAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTTTGCCAAAACCATTaGTATGGAATCCATAAGGCT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFCQNH*YGIHKA
Trigger: AGCCTTATGGATTCCATACCAATGGTTTTGGCAAAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACTGCTTGGATTGGAATaGCATCCAGACGCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELLGLE*HPDASH
Trigger: ATGACTTGCGTCTGGATGCCATTCCAATCCAAGCAG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATATATTTATAGTCACTaGCAATCTCCCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPYIYSH*QSPWRP
Trigger: AGGCCTCCAGGGAGATTGCCAGTGACTATAAATATA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCACTGACCAGAGCCTaGGAATTTTTAGAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSLTRA*EFLECR
Trigger: CCTGCACTCTAAAAATTCCCAGGCTCTGGTCAGTGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATGGGCATGAACAAATaGCACAGCATCTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEMGMNK*HSIWRQ
Trigger: TTGCCTCCAGATGCTGTGCCATTTGTTCATGCCCAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATGGGCATGAACAAATaGCACAGCATCTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKMGMNK*HSIWRQ
Trigger: TTGCCTCCAGATGCTGTGCCATTTGTTCATGCCCAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGATCAGCATGCTTaGCTCCAACAATGGGAATGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKPDQHA*LQQWEC
Trigger: ACATTCCCATTGTTGGAGCCAAGCATGCTGATCTGG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATATGATTTCTTGGCATaGAGGATTTGGGGTGTATCC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPYDFLA*RIWGVS
Trigger: GGATACACCCCAAATCCTCCATGCCAAGAAATCATA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGTCGTATGATTTCTTaGCATGGAGGATTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGRMIS*HGGFGV
Trigger: CACCCCAAATCCTCCATGCCAAGAAATCATACGACC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGATTCTTCAGGTTTCTaGTTCTGTCATAATCCACTG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKDSSGF*FCHNPL
Trigger: CAGTGGATTATGACAGAACCAGAAACCTGAAGAATC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCCCGATATTTGATATaGCTGGCCAGATGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSRYLI*LARCFW
Trigger: CCAGAAGCATCTGGCCAGCCATATCAAATATCGGGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATGTCGGGCACGATGTaGATTTTCATCTTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKMSGTM*IFILFF
Trigger: AAAGAACAAGATGAAAATCCACATCGTGCCCGACAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGCCTGCACGTAGACTaGTGTATCTGTGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSLHVD*CICDKL
Trigger: AAGCTTGTCACAGATACACCAGTCTACGTGCAGGCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACAAATGGAACATCTTTaGGGCCAAGTGTATACCCAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPQMEHL*GQVYTH
Trigger: ATGGGTATACACTTGGCCCCAAAGATGTTCCATTTG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGTAGCGTAGATCACTaGCATTCCAGTAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECSVDH*HSSKPS
Trigger: AGAGGGCTTACTGGAATGCCAGTGATCTACGCTACA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGCATCTTTCACCGTGTaGTATTTCCCTTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPASFTV*YFPLVF
Trigger: AAAGACCAAAGGGAAATACCACACGGTGAAAGATGC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGCAGTCAACATATCTaGACGCAGAATTTCATTACA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSSQHI*TQNFIT
Trigger: TGTAATGAAATTCTGCGTCCAGATATGTTGACTGCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397345.8
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTCCTGTATTTGATCTaGCTCCACATATGCGAATTG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFLYLI*LHICEL
Trigger: CAATTCGCATATGTGGAGCCAGATCAAATACAGGAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397345.8
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATGTTTCACCTCTGGTaGCTCCAGCATGATGGAGTA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEMFHLW*LQHDGV
Trigger: TACTCCATCATGCTGGAGCCACCAGAGGTGAAACAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAATGCAGGTTCTCTTTaGCATCTTTTCTGTAAGCGA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKNAGSL*HLFCKR
Trigger: TCGCTTACAGAAAAGATGCCAAAGAGAACCTGCATT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTCGATCAGCCACTGTaGTGTAATGCAGGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVDQPL*CNAGSL
Trigger: AAGAGAACCTGCATTACACCACAGTGGCTGATCGAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTCGATCAGCCACTGTaGTGTAATGCAGGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVDQPL*CNAGSL
Trigger: AAGAGAACCTGCATTACACCACAGTGGCTGATCGAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGATTATCGGGTATaGTGTGGTAGTGGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKPDYRV*CGSGLY
Trigger: GTAAAGGCCACTACCACACCATACCCGATAATCTGG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGACTCTCTGTATCTCTaGGGTGTCCAAAACAGTCTC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEDSLYL*GVQNSL
Trigger: GAGACTGTTTTGGACACCCCAGAGATACAGAGAGTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGAGCTGAAATTCTTCTaGTTTTCTTTTACACGCAGT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKELKFF*FSFTRS
Trigger: ACTGCGTGTAAAAGAAAATCAGAAGAATTTCAGCTC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTCTCAAAGTCTTCATaGTATTTCACCGTTGAGATG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFSKSS*YFTVEM
Trigger: CATCTCAACGGTGAAATATCATGAAGACTTTGAGAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCAGCAAGGAAAAGGTaGACATCTCTGCTATTTTTC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSARKR*TSLLFF
Trigger: GAAAAATAGCAGAGATGTTCACCTTTTCCTTGCTGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGGTTTGGAAGTTTCTaGTTGCTCATAGTCAGATGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPWFGSF*LLIVRC
Trigger: ACATCTGACTATGAGCAATCAGAAACTTCCAAACCA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTGTTTCGGTCTGCATaGAGTAGATCTGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVFRSA*SRSGLS
Trigger: TGAAAGACCAGATCTACTTCATGCAGACCGAAACAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAGCTGTGGGTTCTCTaGAGCAGGAAGCACATTATA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEKLWVL*SRKHII
Trigger: TATAATGTGCTTCCTGCTTCAGAGAACCCACAGCTT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGTTTAGGGTCATCTTaGAGACTTTGGAAGCCAACC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSLGSS*RLWKPT
Trigger: GGTTGGCTTCCAAAGTCTTCAAGATGACCCTAAACT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGATCATCCTGAAGACTaGGAAATCCAACTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKDHPED*EIQLAC
Trigger: GCAAGCAAGTTGGATTTCTCAGTCTTCAGGATGATC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCCATTCAAGGTCTaGCTTATACAAATTGTCACT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKHPFKV*LIQIVT
Trigger: AGTGACAATTTGTATAAGTCAGACCTTGAATGGATG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTATCAGGCATGACATaGATAGTTTTCTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVSGMT*IVFLSL
Trigger: CAATGACAAGAAAACTATTCATGTCATGCCTGATAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGGATAATGTCGTTTTaGTCCGGCATGCATGTCCAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKWIMSF*SGMHVH
Trigger: ATGGACATGCATGCCGGATCAAAACGACATTATCCA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGGATAATGTCGTTTTaGTCCGGCATGCATGTCCAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEWIMSF*SGMHVH
Trigger: ATGGACATGCATGCCGGATCAAAACGACATTATCCA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATATAGTCTCTCATTCTaGATCTGGCCTGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEYSLSF*IWPACS
Trigger: TGAGCATGCAGGCCAGATTCAGAATGAGAGACTATA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAACTCTGAAGGTCGTATaGTTTCTTGGCATGGAGGAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKTLKVV*FLGMED
Trigger: ATCCTCCATGCCAAGAAATCATACGACCTTCAGAGT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGAGGGGCGTGTCTGTaGCCAGATTATAGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERGACL*PDYSFV
Trigger: TACAAAACTATAATCTGGTCACAGACACGCCCCTCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGAGGGGCGTGTCTGTaGCCAGATTATAGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRGACL*PDYSFV
Trigger: TACAAAACTATAATCTGGTCACAGACACGCCCCTCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATTCTTCCCGATATTTaGTATGGCTGGCCAGATGCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEILPDI*YGWPDA
Trigger: AGCATCTGGCCAGCCATATCAAATATCGGGAAGAAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAACAATATCGCTGATCTaGTCTGTGACTTTCCTGACG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKTISLI*SVTFLT
Trigger: CGTCAGGAAAGTCACAGATCAGATCAGCGATATTGT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAACAATATCGCTGATCTaGTCTGTGACTTTCCTGACG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTETISLI*SVTFLT
Trigger: CGTCAGGAAAGTCACAGATCAGATCAGCGATATTGT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGACTGGTGTATCTGTaGCAAGCTTGTAGTCATTCC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERLVYL*QACSHS
Trigger: GGAATGACTACAAGCTTGTCACAGATACACCAGTCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGACTGGTGTATCTGTaGCAAGCTTGTAGTCATTCC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRLVYL*QACSHS
Trigger: GGAATGACTACAAGCTTGTCACAGATACACCAGTCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTGATGTGTTTGAAGTaGGGAGTGTCACCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLMCLK*GVSPGS
Trigger: ACTTCCAGGTGACACTCCTCACTTCAAACACATCAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGGCTTCTTTGTACTTaGAATAACTGCTCATGTAAC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKRLLCT*NNCSCN
Trigger: GTTACATGAGCAGTTATTTCAAGTACAAAGAAGCCT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGTGGCCCTGCATCTTaGAGAAGTCTGATTTGTAGA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCGPAS*RSLICR
Trigger: TCTACAAATCAGACTTCTTCAAGATGCAGGGCCACA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCTTTTCAGCCAGAGTaGAATCAGGGGTATCATAGG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESFQPE*NQGYHR
Trigger: CCTATGATACCCCTGATTTCACTCTGGCTGAAAAGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTGGCTGCTTTGATATaGACAGCATCTGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLAALI*TASGSM
Trigger: CATTGAGCCAGATGCTGTTCATATCAAAGCAGCCAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACTATTAAAGTATTCCTaGGGGCGAGCACCGTGTTTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELLKYS*GRAPCF
Trigger: AAAACACGGTGCTCGCCCTCAGGAATACTTTAATAG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGAGACTCTTTGGCAGTaGTGTACGTTGGTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEETLWQ*CTLVFQ
Trigger: TTGAAACACCAACGTACATCACTGCCAAAGAGTCTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGAGACTCTTTGGCAGTaGTGTACGTTGGTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKETLWQ*CTLVFQ
Trigger: TTGAAACACCAACGTACATCACTGCCAAAGAGTCTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATATCAACCACAGAAGTaGAATTGGCTTTCTCCATTT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKYQPQK*NWLSPF
Trigger: AAATGGAGAAAGCCAATTTCACTTCTGTGGTTGATA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACTTGTTGGGCATGAATaGTCTCTGGAGTATCAACCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELVGHE*SLEYQP
Trigger: TGGTTGATACTCCAGAGATCATTCATGCCCAACAAG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACTTGTTGGGCATGAATaGTCTCTGGAGTATCAACCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLVGHE*SLEYQP
Trigger: TGGTTGATACTCCAGAGATCATTCATGCCCAACAAG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTACTTTTTCTGGCTTaGAAGATTCTTGACTTGTTG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVLFLA*KILDLL
Trigger: CAACAAGTCAAGAATCTTTCAAGCCAGAAAAAGTAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATAACCGAGCTAATGTaGTTCTGCGTCTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKITELM*FCVSFT
Trigger: TGTGAAGGAGACGCAGAAGCACATTAGCTCGGTTAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAACAGGTGTCGGAGTTaGTTTTCTCATGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPNRCRS*FSHVLF
Trigger: AAAGAGAACATGAGAAAAGCAACTCCGACACCTGTT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATGTCACTGAAGTCCTaGATGTTCTTCTTTACTCGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPMSLKS*MFFFTR
Trigger: ACGAGTAAAGAAGAACATGCAGGACTTCAGTGACAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACCAGCCTTCATCAATTaGTTGAACATTTATGATGGC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPPAFIN*LNIYDG
Trigger: GCCATCATAAATGTTCAAGCAATTGATGAAGGCTGG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAACCGAAACATTGACTaGAGGATCTGTAAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKNRNID*RICKSC
Trigger: GCAGGACTTACAGATCCTGCAGTCAATGTTTCGGTT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGAGGGAAGAAGCCTTTaGCTCTGTCTTCTTCGTATT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEEGRSL*LCLLRI
Trigger: AATACGAAGAAGACAGAGGCAAAGGCTTCTTCCCTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAACGTCGCTGGCAATTaGCTGAGATTTCTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKNVAGN*LRFLSL
Trigger: CAAGCTAAGAAATCTCAGGCAATTGCCAGCGACGTT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATATTCAACATCGCTCTaGAGCGCATATGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKYSTSL*SAYAFL
Trigger: CAAGAAGGCATATGCGCTGCAGAGCGATGTTGAATA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCAAGTCTTTCAAGTCTaGTTTGTACATATTCTCACT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHQVFQV*FVHILT
Trigger: AGTGAGAATATGTACAAAGCAGACTTGAAAGACTTG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTATCACTCTGTATCTaGATCATGTTCTTAGACAGC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLSLCI*IMFLDS
Trigger: GCTGTCTAAGAACATGATGCAGATACAGAGTGATAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTGACATTCCTCGTATaGTCAAGACTCATGGCGTCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLTFLV*SRLMAS
Trigger: TGACGCCATGAGTCTTGAGCATACGAGGAATGTCAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCAATAGTATACTTGTaGTTCAGTTTCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSIVYL*FSFSPS
Trigger: AGAGGGAGAGAAACTGAAGCACAAGTATACTATTGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGAAATCCAACTTGCTTaGCTTTGGCTTTCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEEIQLA*LWLSRR
Trigger: CCTACGAGAAAGCCAAAGGCAAGCAAGTTGGATTTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGAAATCCAACTTGCTTaGCTTTGGCTTTCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKEIQLA*LWLSRR
Trigger: CCTACGAGAAAGCCAAAGGCAAGCAAGTTGGATTTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGTGGTACTTGGTCTTaGTGGCTTCATAGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECGTWS*WLHSPF
Trigger: AAAAGGGCTATGAAGCCAGCAAGACCAAGTACCACA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACTTGTTCATGGTATGTaGATTCTGCTTGGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELVHGM*ILLGKH
Trigger: GTGCTTGCCAAGCAGAATGCACATACCATGAACAAG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGTTTTGGGTCATCTTaGAGACTCCGGAATCCAACA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESFGSS*RLRNPT
Trigger: TGTTGGATTCCGGAGTCTGCAAGATGACCCAAAACT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGTTTTGGGTCATCTTaGAGACTCCGGAATCCAACA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSFGSS*RLRNPT
Trigger: TGTTGGATTCCGGAGTCTGCAAGATGACCCAAAACT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTACTTGAATTCACTTaGAATATCTCTGGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVLEFT*NISGGL
Trigger: AAGGCCTCCAGAGATATTGCAAGTGAATTCAAGTAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGATGGAAATAGCATCTaGTCTCAGATCATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPDGNSI*SQIIVL
Trigger: AAGGACTATGATCTGAGAGCAGATGCTATTTCCATC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACACTCTGAACGTCATTaGAGTGATGGGCATGAACAA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEHSERH*SDGHEQ
Trigger: TTGTTCATGCCCATCACTGCAATGACGTTCAGAGTG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATTCTGAATCTGGCCTaGATGCTCAAACCAAACCAG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEILNLA*MLKPNQ
Trigger: CTGGTTTGGTTTGAGCATGCAGGCCAGATTCAGAAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGGGGATATGAACATTTaGTTTGGTATCCTCATAATG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKGDMNI*FGILIM
Trigger: CATTATGAGGATACCAAAGCAAATGTTCATATCCCC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACCTTGTACAGGTTACTaGTGTAAAGATTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPPCTGY*CKDSSG
Trigger: ACCTGAAGAATCTTTACAGCAGTAACCTGTACAAGG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTTTTAAGGTCACACTaGTATTGGAGAAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFLRSH*YWRRLK
Trigger: CTTCAGCCTTCTCCAATACCAGTGTGACCTTAAAAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGACTCTCTCAATCTCTaGAGTCACAGTGGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEDSLNL*SHSGWN
Trigger: ATTCCAACCACTGTGACTCCAGAGATTGAGAGAGTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGACTCTCTCAATCTCTaGAGTCACAGTGGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKDSLNL*SHSGWN
Trigger: ATTCCAACCACTGTGACTCCAGAGATTGAGAGAGTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGATGTTGTCTTCTGCTaGATCATAGTCAAAAACCGA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPDVVFC*IIVKNR
Trigger: TCGGTTTTTGACTATGATCCAGCAGAAGACAACATC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACCATATAGTCATACATaGCACGGAAGATTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPPYSHT*HGRFFQ
Trigger: CTGGAAAAATCTTCCGTGCCATGTATGACTATATGG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTTCCCGAACACCATTaGCTTATACAGACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLPEHH*LIQTFS
Trigger: AGAAAAAGTCTGTATAAGCCAATGGTGTTCGGGAAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTGCCAGAGCTGGTTTaGAAGTTTCTGATTGCTCAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVPELV*KFLIAH
Trigger: ATGAGCAATCAGAAACTTCCAAACCAGCTCTGGCAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATTCATTTTATACTCTaGTGTTTCGGTCTGCATGAA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHIHFIL*CFGLHE
Trigger: TTCATGCAGACCGAAACACCAGAGTATAAAATGAAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGCATCTGCTGGTATATaGCACTTGAACTTCTCACCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKASAGI*HLNFSP
Trigger: AGGTGAGAAGTTCAAGTGCCATATACCAGCAGATGC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCATCTGCTGGTATATaGCACTTGAACTTCTCACCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEASAGI*HLNFSP
Trigger: AGGTGAGAAGTTCAAGTGCCATATACCAGCAGATGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACTGTGGAGCATCTGCTaGTATATGGCACTTGAACTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLWSIC*YMALEL
Trigger: AAGTTCAAGTGCCATATACCAGCAGATGCTCCACAG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATATAATCAACGTCGCTaGCAATTGCCTGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPYNQRR*QLPEIS
Trigger: AGAAATCTCAGGCAATTGCCAGCGACGTTGATTATA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGAAGATCAGGACTCATaGTGTATTTATGTTTCACAT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHEDQDS*CIYVSH
Trigger: ATGTGAAACATAAATACACCATGAGTCCTGATCTTC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGTAAGCATTGCACTTaGCCTGGAGAAACTGAGGAA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCKHCT*PGETEE
Trigger: TTCCTCAGTTTCTCCAGGCCAAGTGCAATGCTTACA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGCACATTGTTGCCCTTaGCTATTAAGTCATACCAAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPAHCCP*LLSHTN
Trigger: ATTGGTATGACTTAATAGCCAAGGGCAACAATGTGC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCACTCATGGTGATTTaGTTTACTCTGGAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSLMVI*FTLESK
Trigger: TTTACTCTCCAGAGTAAACCAAATCACCATGAGTGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAAAGTGTCTGGGTGCTaGCGGTACTTCTTTTCACTA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKKVSGC*RYFFSL
Trigger: TAGTGAAAAGAAGTACCGCCAGCACCCAGACACTTT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTGTCTGGGTGCTaGCGGTACTTCTTTTCACTA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEKVSGC*RYFFSL
Trigger: TAGTGAAAAGAAGTACCGCCAGCACCCAGACACTTT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTTGCCAAAATAATCTaGGGGATATCAGGCATGATG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFAKII*GISGMM
Trigger: CATCATGCCTGATATCCCCCAGATTATTTTGGCAAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAATGTTCATTGCATCTaGAAGGAGGATGTACTTGTG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPNVHCI*KEDVLV
Trigger: CACAAGTACATCCTCCTTCCAGATGCAATGAACATT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTTTGGCTACATTCATaGACAACACAAGTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFWLHS*TTQVLG
Trigger: ACCCAAAACTTGTGTTGTCCATGAATGTAGCCAAAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTTCACTCTGCATTTTaGCTACATTCATGGACAACA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFHSAF*LHSWTT
Trigger: TGTTGTCCATGAATGTAGCCAAAATGCAGAGTGAAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTATCACTCCTATTTTTaGCATTTGTCTTTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHYHSYF*HLSLPE
Trigger: TTCTGGCAAAGACAAATGCCAAAAATAGGAGTGATA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTTTGCTGCTTTGATTaGTATGGCATCAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFCCFD*YGINRK
Trigger: CTTCCTGTTGATGCCATACCAATCAAAGCAGCAAAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGTACTTGTATTCACTaGCAATTTCCCGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECTCIH*QFPGRL
Trigger: AAGCCTCCCGGGAAATTGCCAGTGAATACAAGTACA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACACTCAAAATCTGGGTaGCTCGTTTATTTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKHSKSG*LVYFSH
Trigger: ATGAGAAAAATAAACGAGCCACCCAGATTTTGAGTG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAAACTTAAATTGATCTaGGTGCTGACGGTAAACATG +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKKLKLI*VLTVNM
Trigger: CATGTTTACCGTCAGCACCCAGATCAATTTAAGTTT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTTTGCCAAAACCATTaGTATGGAATCCATAAGGCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFCQNH*YGIHKA
Trigger: AGCCTTATGGATTCCATACCAATGGTTTTGGCAAAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAACTTCAGGGGTATCTaGCATAATGTGGACAGTGGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKNFRGI*HNVDSG
Trigger: ACCACTGTCCACATTATGCCAGATACCCCTGAAGTT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACAGCCACAATGGGAATaGCATCACTTCTCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKQPQWE*HHFSSH
Trigger: ATGACTTGAGAAGTGATGCCATTCCCATTGTGGCTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGGTCTGACACTTCTTaGCCAAAACGATACCAAGCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRSDTS*PKRYQA
Trigger: TGCTTGGTATCGTTTTGGCCAAGAAGTGTCAGACCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGGTCTGACACTTCTTaGCCAAAACGATACCAAGCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERSDTS*PKRYQA
Trigger: TGCTTGGTATCGTTTTGGCCAAGAAGTGTCAGACCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATATCTCTTGAAGCCTTaGCTGCTTGGATTGGAATGG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKYLLKP*LLGLEW
Trigger: CCATTCCAATCCAAGCAGCCAAGGCTTCAAGAGATA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATACTCTCGTTCATTCTaGAGCTTGTCAGCTATGAGG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEYSRSF*SLSAMR
Trigger: CCTCATAGCTGACAAGCTCCAGAATGAACGAGAGTA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTAGTAACCCTTACATaGTCCACAGAATCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELVTLT*STESSG
Trigger: CCCACTGGATTCTGTGGACCATGTAAGGGTTACTAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTAGTAACCCTTACATaGTCCACAGAATCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLVTLT*STESSG
Trigger: CCCACTGGATTCTGTGGACCATGTAAGGGTTACTAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTTTTCCCATGTCTTTaGAGTGGGAGATATGTGGTG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVFPCL*SGRYVV
Trigger: CACCACATATCTCCCACTCCAAAGACATGGGAAAAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATGTCGGGCACGATGTaGATTTTCATCTTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPMSGTM*IFILFF
Trigger: AAAGAACAAGATGAAAATCCACATCGTGCCCGACAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTGTCTTTCAGTTTGTaGTACAATTCCCGATACAGT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLSFSL*YNSRYS
Trigger: ACTGTATCGGGAATTGTACCACAAACTGAAAGACAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGGGTCTCTCTTTGGTaGCAAGTTCAACATACAGAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGVSLW*QVQHTD
Trigger: ATCTGTATGTTGAACTTGCCACCAAAGAGAGACCCC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTGTGGTGTAGCCTCTaGGTTTGGCCTTGTTGTATT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELWCSL*VWPCCI
Trigger: AATACAACAAGGCCAAACCCAGAGGCTACACCACAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTGTGGTGTAGCCTCTaGGTTTGGCCTTGTTGTATT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLWCSL*VWPCCI
Trigger: AATACAACAAGGCCAAACCCAGAGGCTACACCACAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGATATGAACAGCATCTaGCTCAATGGTGCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEDMNSI*LNGAVG
Trigger: TCCAACTGCACCATTGAGCCAGATGCTGTTCATATC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGATATGAACAGCATCTaGCTCAATGGTGCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKDMNSI*LNGAVG
Trigger: TCCAACTGCACCATTGAGCCAGATGCTGTTCATATC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAAGTGCTTCTTGACATaGTCCTTGTACTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPKCFLT*SLYLFS
Trigger: TGAGAACAAGTACAAGGACCATGTCAAGAAGCACTT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGAGCTGGCTGTCTTTTaGATTGTATTTTGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPELAVF*IVFWCL
Trigger: AAGACACCAAAATACAATCCAAAAGACAGCCAGCTC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGTACTGGTAAGAACTaGCAAGTTGGCTTGTATTCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPCTGKN*QVGLYS
Trigger: TGAATACAAGCCAACTTGCCAGTTCTTACCAGTACA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGCAGTGATGTACGTTaGTGTTTCAAAGTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGSDVR*CFKVQH
Trigger: ATGCTGGACTTTGAAACACCAACGTACATCACTGCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCCTTGTACTTTTTCTaGCTTGAAAGATTCTTGACT +
Preference number: 4 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSLYFF*LERFLT
Trigger: AGTCAAGAATCTTTCAAGCCAGAAAAAGTACAAGGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCTCATAATACGACATaGACTTCTCAGCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSHNTT*TSQHLP
Trigger: AGGAAGATGCTGAGAAGTCCATGTCGTATTATGAGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATTTCTGGCGTGTCTTaGACAACTGTAATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPISGVS*TTVIFP
Trigger: AGGAAAAATTACAGTTGTTCAAGACACGCCAGAAAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACCTGTAATAGTCTCCTaGTCTTGGTCATTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEPVIVS*SWSFRF
Trigger: AAAACGGAATGACCAAGATCAGGAGACTATTACAGG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCTGTAATAGTCTCCTaGTCTTGGTCATTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKPVIVS*SWSFRF
Trigger: AAAACGGAATGACCAAGATCAGGAGACTATTACAGG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCCTGCAGACAAGTGTaGTGCTTTGAAATGCCTAAA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSCRQV*CFEMPK
Trigger: TTTAGGCATTTCAAAGCATCACACTTGTCTGCAGGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTTATACTCCCGATCTaGTTGTATCTTGGCCACGTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFILPI*LYLGHV
Trigger: AACGTGGCCAAGATACAATCAGATCGGGAGTATAAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGTATAAGATATCACTaGCTTGCTTCGTGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPCIRYH*LASCSV
Trigger: AACAGAACACGAAGCAAGTCAGTGATATCTTATACA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATACAGATTATCACTCTaGATCTGCATGGCATTCCTG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKYRLSL*ICMAFL
Trigger: CAGGAATGCCATGCAGATTCAGAGTGATAATCTGTA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACAGCCACTGGAGATCTaGCTTGTAAATATTGTCACT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEQPLEI*LVNIVT
Trigger: AGTGACAATATTTACAAGTCAGATCTCCAGTGGCTG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397345.8
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACATCCATTCAAGGTCTaGCTTATACAAATTGTCACT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPHPFKV*LIQIVT
Trigger: AGTGACAATTTGTATAAGTCAGACCTTGAATGGATG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATAGTCCTTCATCTTTaGTTCATCCCATCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKIVLHL*FIPSLG
Trigger: ACCAAGGGATGGGATGAATCAAAGATGAAGGACTAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGTAATCAATCTCACTaGCTTTCTTCTGGGAATCCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGNQSH*LSSGNP
Trigger: AGGATTCCCAGAAGAAAGTCAGTGAGATTGATTACC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGTAATCAATCTCACTaGCTTTCTTCTGGGAATCCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGNQSH*LSSGNP
Trigger: AGGATTCCCAGAAGAAAGTCAGTGAGATTGATTACC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAGGCTTCTTTGTACTTaGAATAACTGCTCATGTAAC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRLLCT*NNCSCN
Trigger: GTTACATGAGCAGTTATTTCAAGTACAAAGAAGCCT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACATCTTGAAGAAGTCTaGTTTGTAGATCAACTCACT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPHLEEV*FVDQLT
Trigger: AGTGAGTTGATCTACAAATCAGACTTCTTCAAGATG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGTACTTTTTCTCACTaGCCATGTCCTTCACGTCTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECTFSH*PCPSRL
Trigger: AAGACGTGAAGGACATGGTCAGTGAGAAAAAGTACA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGTACTTTTTCTCACTaGCCATGTCCTTCACGTCTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCTFSH*PCPSRL
Trigger: AAGACGTGAAGGACATGGTCAGTGAGAAAAAGTACA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGTTTTTGTCATCAGTaGCAGAAAGCTTGCAACCCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECFCHQ*QKACNP
Trigger: AGGGTTGCAAGCTTTCTGTCACTGATGACAAAAACA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCAGGACATGATTCATaGTCAGAGACTCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSGHDS*SETPSC
Trigger: ACATGAAGGAGTCTCTGATCATGAATCATGTCCTGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACTTGTATTCAGGACATaGTTCATGATCAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELVFRT*FMIRDS
Trigger: GGAGTCTCTGATCATGAATCATGTCCTGAATACAAG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTGACTTGTTGGGCATaGATGATCTCTGGAGTATCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELTCWA*MISGVS
Trigger: TGATACTCCAGAGATCATTCATGCCCAACAAGTCAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTACTTTTTCTGGCTTaGAAGATTCTTGACTTGTTG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVLFLA*KILDLL
Trigger: CAACAAGTCAAGAATCTTTCAAGCCAGAAAAAGTAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCACAGTGGTTGGAATaGCTGTTCCCAAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSQWLE*LFPSFL
Trigger: AAGAAAACTTGGGAACAGGCATTCCAACCACTGTGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCACAGTGGTTGGAATaGCTGTTCCCAAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESQWLE*LFPSFL
Trigger: AAGAAAACTTGGGAACAGGCATTCCAACCACTGTGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATAGTCTTCGTCATCTaGCATTTTTCCAGAGTAGTA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPIVFVI*HFSRVV
Trigger: TACTACTCTGGAAAAATGGCAGATGACGAAGACTAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACATTTTCTGACTGTGTaGAATGTAGGGGGTCATGAA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKHFLTV*NVGGHE
Trigger: TTCATGACCCCCTACATTGCACACAGTCAGAAAATG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAACCTTACTGACTTGCTaGGACACTTTCTTTGCATGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTETLLTC*DTFFAC
Trigger: ACATGCAAAGAAAGTGTCGCAGCAAGTCAGTAAGGT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGGAGAATCAGTGACTaGCGTGAATTTGGTCTTATC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERRISD*REFGLI
Trigger: GATAAGACCAAATTCACGGCAGTCACTGATTCTCCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACAAGTCTTTCAAGTCTaGTTTGTACATATTCTCACT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKQVFQV*FVHILT
Trigger: AGTGAGAATATGTACAAAGCAGACTTGAAAGACTTG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGTCATATCCCTTCTTaGTCAAGTCTTTCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGHIPS*SSLSSL
Trigger: CAGACTTGAAAGACTTGAGCAAGAAGGGATATGACC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTATATTGTAAGCATTaGACTTGGCCTGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLYCKH*TWPGET
Trigger: AGTTTCTCCAGGCCAAGTGCAATGCTTACAATATAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACTTCTGAAACCCACATaGTTTCCCTTTGACTTCTCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELLKPT*FPFDFS
Trigger: TGAGAAGTCAAAGGGAAAGCATGTGGGTTTCAGAAG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATCAGACTGCAGCTTTaGCACATTCATATAGTGGAC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEIRLQL*HIHIVD
Trigger: GTCCACTATATGAATGTGGCAAAGCTGCAGTCTGAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCAATAGTATACTTGTaGTTCAGTTTCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSIVYL*FSFSPS
Trigger: AGAGGGAGAGAAACTGAAGCACAAGTATACTATTGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAACTAAGAATCTCTCCTaGTTTCTTTGCCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTETKNLS*FLCLLH
Trigger: GTGGAGAAGGCAAAGAAAGCAGGAGAGATTCTTAGT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAACTAAGAATCTCTCCTaGTTTCTTTGCCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKTKNLS*FLCLLH
Trigger: GTGGAGAAGGCAAAGAAAGCAGGAGAGATTCTTAGT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTTGTCAGCCTCCCATaGTTGTTTGTAGAGATGTTC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFVSLP*LFVEMF
Trigger: GAACATCTCTACAAACAAGCATGGGAGGCTGACAAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTTGTCAGCCTCCCATaGTTGTTTGTAGAGATGTTC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEFVSLP*LFVEMF
Trigger: GAACATCTCTACAAACAAGCATGGGAGGCTGACAAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACAGCTCAATGTTCATTaGATCTGGAAGGAGGATGTA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEQLNVH*IWKEDV
Trigger: TACATCCTCCTTCCAGATGCAATGAACATTGAGCTG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACAGCTCAATGTTCATTaGATCTGGAAGGAGGATGTA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKQLNVH*IWKEDV
Trigger: TACATCCTCCTTCCAGATGCAATGAACATTGAGCTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACATTATCACTCTGTATaGGATTCATATTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPHYHSV*DSYSWS
Trigger: TGACCAGGAATATGAATCGCATACAGAGTGATAATG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTCATAGGCTTTCCGTaGATGAATGATGTCATTCTG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVIGFP*MNDVIL
Trigger: CAGAATGACATCATTCATGCACGGAAAGCCTATGAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGGGATATGAACATTTaGTTTGGTATCCTCATAATG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGDMNI*FGILIM
Trigger: CATTATGAGGATACCAAAGCAAATGTTCATATCCCC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAAGTGTATACCCATATaGCTTGGTGTGTTCATAGGC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKKCIPI*LGVFIG
Trigger: GCCTATGAACACACCAAGGCATATGGGTATACACTT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAGTGTATACCCATATaGCTTGGTGTGTTCATAGGC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEKCIPI*LGVFIG
Trigger: GCCTATGAACACACCAAGGCATATGGGTATACACTT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGGTCACACTGGTATTaGAGAAGGCTGAAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERSHWY*RRLKFF
Trigger: AAAGAACTTCAGCCTTCTCCAATACCAGTGTGACCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGGTCACACTGGTATTaGAGAAGGCTGAAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRSHWY*RRLKFF
Trigger: AAAGAACTTCAGCCTTCTCCAATACCAGTGTGACCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATACACGCAGTATTTCTaGCGTGTCTTGAACAACTGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKYTQYF*RVLNNC
Trigger: ACAGTTGTTCAAGACACGCCAGAAATACTGCGTGTA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATACACGCAGTATTTCTaGCGTGTCTTGAACAACTGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEYTQYF*RVLNNC
Trigger: ACAGTTGTTCAAGACACGCCAGAAATACTGCGTGTA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTCACCGAGCTAATGTaGTCCTGTGTTTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFTELM*SCVCFT
Trigger: AGTGAAACAAACACAGGACCACATTAGCTCGGTGAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGGAGTGATAGGTGTTaGGATTCCTTTCCCCAAATT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKWSDRC*DSFPQI
Trigger: AATTTGGGGAAAGGAATCCCAACACCTATCACTCCA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGGAGTGATAGGTGTTaGGATTCCTTTCCCCAAATT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEWSDRC*DSFPQI
Trigger: AATTTGGGGAAAGGAATCCCAACACCTATCACTCCA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTTGTGGGAGCTCTGTaGTTTTTGCATGTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVVGAL*FLHVCK
Trigger: CTTACAAACATGCAAAAACCACAGAGCTCCCACAAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTTGTGGGAGCTCTGTaGTTTTTGCATGTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVVGAL*FLHVCK
Trigger: CTTACAAACATGCAAAAACCACAGAGCTCCCACAAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGATACCGTTGTCTGTTaGGTAGCAACTGAAGATGAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKDTVVC*VATEDD
Trigger: ATCATCTTCAGTTGCTACCCAACAGACAACGGTATC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGATACCGTTGTCTGTTaGGTAGCAACTGAAGATGAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEDTVVC*VATEDD
Trigger: ATCATCTTCAGTTGCTACCCAACAGACAACGGTATC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATGGATGAGATGGGATaGAAGATACCGTTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEMDEMG*KIPLSV
Trigger: AACAGACAACGGTATCTTCCATCCCATCTCATCCAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATGGATGAGATGGGATaGAAGATACCGTTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKMDEMG*KIPLSV
Trigger: AACAGACAACGGTATCTTCCATCCCATCTCATCCAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTTTCCAGCAGTAGATaGATGAGATGGGATGGAAGA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFSSSR*MRWDGR
Trigger: TCTTCCATCCCATCTCATCCATCTACTGCTGGAAAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGCATTGACTCTGTGTTaGATAAACTGTGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKALTLC*INCGAS
Trigger: AGATGCTCCACAGTTTATCCAACACAGAGTCAATGC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCACTCCTCTGGGCCTaGTTAATTTTAGACTGTACT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSLLWA*LILDCT
Trigger: AGTACAGTCTAAAATTAACCAGGCCCAGAGGAGTGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGGGCGTGTTGTATTTaGACTTTGTCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGACCI*TLSSHS
Trigger: ACTATGAGAAGACAAAGTCCAAATACAACACGCCCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGGGCGTGTTGTATTTaGACTTTGTCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGACCI*TLSSHS
Trigger: ACTATGAGAAGACAAAGTCCAAATACAACACGCCCC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTATTTATAATCACTaGCAATGTTTCTCGATGCCT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCIYNH*QCFSMP
Trigger: AGGCATCGAGAAACATTGCCAGTGATTATAAATACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGTGTAATGATGCAATaGCTGTTTGTAGTTGACATT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKCVMMQ*LFVVDI
Trigger: AATGTCAACTACAAACAGCCATTGCATCATTACACA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACATAGCCCTTGGCAATaGTTTTCTTCCAATCTGCTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKHSPWQ*FSSNLL
Trigger: AAGCAGATTGGAAGAAAACCATTGCCAAGGGCTATG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACATAGCCCTTGGCAATaGTTTTCTTCCAATCTGCTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEHSPWQ*FSSNLL
Trigger: AAGCAGATTGGAAGAAAACCATTGCCAAGGGCTATG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCAAATCATAGCCCTTaGCAATGGTTTTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSNHSP*QWFSSN
Trigger: ATTGGAAGAAAACCATTGCCAAGGGCTATGATTTGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAATTGGGATGGCATCTaGTCTCAAATCATAGCCCTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTENWDGI*SQIIAL
Trigger: AAGGGCTATGATTTGAGACCAGATGCCATCCCAATT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACAGCAACAATTGGGATaGCATCTGGTCTCAAATCAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKQQQLG*HLVSNH
Trigger: ATGATTTGAGACCAGATGCCATCCCAATTGTTGCTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTTTGCAGCAACAATTaGGATGGCATCTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEFCSNN*DGIWSQ
Trigger: TTGAGACCAGATGCCATCCCAATTGTTGCTGCAAAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCACTCATGGTGATTTaGTTTACTCTGGAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSLMVI*FTLESK
Trigger: TTTACTCTCCAGAGTAAACCAAATCACCATGAGTGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACCAATTCAAAGCTCATaGCATCAGGAAGCATGTTGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEPIQSS*HQEACC
Trigger: ACAACATGCTTCCTGATGCCATGAGCTTTGAATTGG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATTTTTGCATTATTCTaGGCCAAAACCATGTTCATC +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKIFALF*AKTMFI
Trigger: GATGAACATGGTTTTGGCCCAGAATAATGCAAAAAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATATCAGGCATGATGTaGACTTTGGTTTTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKISGMM*TLVLSA
Trigger: GGCTGACAAAACCAAAGTCCACATCATGCCTGATAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGTATTTCTGATCACTaGCATATTCAGTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGISDH*HIQLLS
Trigger: AGAAAGCAACTGAATATGCCAGTGATCAGAAATACC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACACTCAAAATCTGGGTaGCTCGTTTATTTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPHSKSG*LVYFSH
Trigger: ATGAGAAAAATAAACGAGCCACCCAGATTTTGAGTG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAAACTTAAATTGATCTaGGTGCTGACGGTAAACATG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPKLKLI*VLTVNM
Trigger: CATGTTTACCGTCAGCACCCAGATCAATTTAAGTTT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTATCTGGCATAATGTaGACAGTGGTTTTATCTTTA +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVSGIM*TVVLSL
Trigger: TAAAGATAAAACCACTGTCCACATTATGCCAGATAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGTATTTGTAATCACTaGCAATATCCCGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECICNH*QYPERP
Trigger: AGGCCTCTCGGGATATTGCCAGTGATTACAAATACA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAAATTTCAGCGTTTCTaGACGCTGACGGTAGATAGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKKFQRF*TLTVDS
Trigger: ACTATCTACCGTCAGCGTCCAGAAACGCTGAAATTT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTTCAGCGTTTCTaGACGCTGACGGTAGATAGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEKFQRF*TLTVDS
Trigger: ACTATCTACCGTCAGCGTCCAGAAACGCTGAAATTT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATATATTTATAGTCACTaGCAATCTCCCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKYIYSH*QSPWRP
Trigger: AGGCCTCCAGGGAGATTGCCAGTGACTATAAATATA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATATGATTTCTTGGCATaGAGGATTTGGGGTGTATCC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEYDFLA*RIWGVS
Trigger: GGATACACCCCAAATCCTCCATGCCAAGAAATCATA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATATGATTTCTTGGCATaGAGGATTTGGGGTGTATCC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKYDFLA*RIWGVS
Trigger: GGATACACCCCAAATCCTCCATGCCAAGAAATCATA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACAAATGGAACATCTTTaGGGCCAAGTGTATACCCAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEQMEHL*GQVYTH
Trigger: ATGGGTATACACTTGGCCCCAAAGATGTTCCATTTG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACAAATGGAACATCTTTaGGGCCAAGTGTATACCCAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKQMEHL*GQVYTH
Trigger: ATGGGTATACACTTGGCCCCAAAGATGTTCCATTTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTGTCTTTCAGTTTGTaGTACAATTCCCGATACAGT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLSFSL*YNSRYS
Trigger: ACTGTATCGGGAATTGTACCACAAACTGAAAGACAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCATCTTTCACCGTGTaGTATTTCCCTTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEASFTV*YFPLVF
Trigger: AAAGACCAAAGGGAAATACCACACGGTGAAAGATGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGTAGCCTCTGGGTTTaGCCTTGTTGTATTCCAATT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECSLWV*PCCIPI
Trigger: AATTGGAATACAACAAGGCCAAACCCAGAGGCTACA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCCAGTGGGCTTTGTTaGCTTCGTACTGTTTCTTAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESSGLC*LRTVSY
Trigger: ATAAGAAACAGTACGAAGCCAACAAAGCCCACTGGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCCAGTGGGCTTTGTTaGCTTCGTACTGTTTCTTAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSSGLC*LRTVSY
Trigger: ATAAGAAACAGTACGAAGCCAACAAAGCCCACTGGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGCATGAATGATCTCTaGAGTATCAACCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGMNDL*SINHRS
Trigger: ACTTCTGTGGTTGATACTCCAGAGATCATTCATGCC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGCATGAATGATCTCTaGAGTATCAACCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGMNDL*SINHRS
Trigger: ACTTCTGTGGTTGATACTCCAGAGATCATTCATGCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCCTTGTACTTTTTCTaGCTTGAAAGATTCTTGACT +
Preference number: 4 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSLYFF*LERFLT
Trigger: AGTCAAGAATCTTTCAAGCCAGAAAAAGTACAAGGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCAGCAAGGAAAAGGTaGACATCTCTGCTATTTTTC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSARKR*TSLLFF
Trigger: GAAAAATAGCAGAGATGTTCACCTTTTCCTTGCTGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGGTTTGGAAGTTTCTaGTTGCTCATAGTCAGATGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKWFGSF*LLIVRC
Trigger: ACATCTGACTATGAGCAATCAGAAACTTCCAAACCA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGTATAAAACCTTACTaGCTTGCTGCGACACTTTCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECIKPY*LAATLS
Trigger: AGAAAGTGTCGCAGCAAGTCAGTAAGGTTTTATACA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGCAGGTTGTATTTGTaGATAATTTCCTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGRLYL*IISSPL
Trigger: CAAAGGAGAGGAAATTATTCACAAATACAACCTGCC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGCAGGTTGTATTTGTaGATAATTTCCTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGRLYL*IISSPL
Trigger: CAAAGGAGAGGAAATTATTCACAAATACAACCTGCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGAATTGCATCAGGTCTaGGATCATAGCCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKELHQV*DHSLSF
Trigger: AAAAGAAAGGCTATGATCTCAGACCTGATGCAATTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATGTGGTGTATCTGGTaGAAACGTATATTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEMWCIW*KRIFAL
Trigger: AAGGGCAAATATACGTTTTCACCAGATACACCACAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATGTGGTGTATCTGGTaGAAACGTATATTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKMWCIW*KRIFAL
Trigger: AAGGGCAAATATACGTTTTCACCAGATACACCACAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATGTCATTGGGGATATaGACATTTGCTTTGGTATCC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEMSLGI*TFALVS
Trigger: GGATACCAAAGCAAATGTTCATATCCCCAATGACAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATGTCATTGGGGATATaGACATTTGCTTTGGTATCC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKMSLGI*TFALVS
Trigger: GGATACCAAAGCAAATGTTCATATCCCCAATGACAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTTCTTTTCATAAACTaGTCTGTACAGGCGATCGAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVLFIN*SVQAID
Trigger: ATCGATCGCCTGTACAGATCAGTTTATGAAAAGAAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGTAATTTGTATCACTaGCATGCTTGGTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECNLYH*HAWSLP
Trigger: AGGAAGTGACCAAGCATGTCAGTGATACAAATTACA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTCTCATTGAGGATTTaGGTGGCATTCTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEFSLRI*VAFFAL
Trigger: AAGAGCAAAGAATGCCACTCAAATCCTCAATGAGAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAACAGGTGTCGGAGTTaGTTTTCTCATGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTENRCRS*FSHVLF
Trigger: AAAGAGAACATGAGAAAAGCAACTCCGACACCTGTT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATACATAGGCAGCTTTaGCTTGTATTTGTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEIHRQL*LVFVSG
Trigger: TCCGGAAACAAATACAAGGCAAAGCTGCCTATGTAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGCCTTCATCAATTaGTTGAACATTTATGATGGC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKPAFIN*LNIYDG
Trigger: GCCATCATAAATGTTCAAGCAATTGATGAAGGCTGG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACTGCGACACTTTCTTTaGATGTTCAATATCCTTTGC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLRHFL*MFNILC
Trigger: GCAAAGGATATTGAACATGCAAAGAAAGTGTCGCAG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAAAACCTTACTGACTTaGTGCGACACTTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKKTLLT*CDTFFA
Trigger: TGCAAAGAAAGTGTCGCAGCAAGTCAGTAAGGTTTT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTGTCTTCCCAGTTCTaGTTGTATAAAACCTTACTG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVSSQF*LYKTLL
Trigger: CAGTAAGGTTTTATACAAGCAGAACTGGGAAGACAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAAGATATCACTGACTTaGTTCGTGTTCTGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKKISLT*FVFCFA
Trigger: GGCAAAACAGAACACGAAGCAAGTCAGTGATATCTT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAGATATCACTGACTTaGTTCGTGTTCTGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEKISLT*FVFCFA
Trigger: GGCAAAACAGAACACGAAGCAAGTCAGTGATATCTT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTTACTCTTGTTAAGTaGCTGTTCCATTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVTLVK*LFHCVH
Trigger: ATGGACACAATGGAACAGGCACTTAACAAGAGTAAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTTACTCTTGTTAAGTaGCTGTTCCATTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVTLVK*LFHCVH
Trigger: ATGGACACAATGGAACAGGCACTTAACAAGAGTAAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGCATCTTAGCCACTTaGATGGAATGGACTAATTTG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECILAT*MEWTNL
Trigger: CAAATTAGTCCATTCCATGCAAGTGGCTAAGATGCA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGCATCTTAGCCACTTaGATGGAATGGACTAATTTG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCILAT*MEWTNL
Trigger: CAAATTAGTCCATTCCATGCAAGTGGCTAAGATGCA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTTGGCATTTGTCTTTaGCAGAACTATATCCATGGC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFGICL*QNYIHG
Trigger: GCCATGGATATAGTTCTGGCAAAGACAAATGCCAAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTACTTGAATTCACTTaGAATATCTCTGGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVLEFT*NISGGL
Trigger: AAGGCCTCCAGAGATATTGCAAGTGAATTCAAGTAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGATTTTGTTCTGCCTTaGCAACATAATCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKDFVLP*QHNLWC
Trigger: ACACCAGAGATTATGTTGGCAAGGCAGAACAAAATC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGATTTTGTTCTGCCTTaGCAACATAATCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEDFVLP*QHNLWC
Trigger: ACACCAGAGATTATGTTGGCAAGGCAGAACAAAATC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGATGGAAATAGCATCTaGTCTCAGATCATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEDGNSI*SQIIVL
Trigger: AAGGACTATGATCTGAGAGCAGATGCTATTTCCATC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGATGGAAATAGCATCTaGTCTCAGATCATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKDGNSI*SQIIVL
Trigger: AAGGACTATGATCTGAGAGCAGATGCTATTTCCATC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACCTTGTACAGGTTACTaGTGTAAAGATTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEPCTGY*CKDSSG
Trigger: ACCTGAAGAATCTTTACAGCAGTAACCTGTACAAGG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAATCCCTTCAGGACCTaGAAGTCCTCTTTGTATTTA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTENPFRT*KSSLYL
Trigger: TAAATACAAAGAGGACTTGCAGGTCCTGAAGGGATT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAATCCCTTCAGGACCTaGAAGTCCTCTTTGTATTTA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKNPFRT*KSSLYL
Trigger: TAAATACAAAGAGGACTTGCAGGTCCTGAAGGGATT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGATGTTGTCTTCTGCTaGATCATAGTCAAAAACCGA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKDVVFC*IIVKNR
Trigger: TCGGTTTTTGACTATGATCCAGCAGAAGACAACATC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGATGTTGTCTTCTGCTaGATCATAGTCAAAAACCGA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEDVVFC*IIVKNR
Trigger: TCGGTTTTTGACTATGATCCAGCAGAAGACAACATC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACCATATAGTCATACATaGCACGGAAGATTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEPYSHT*HGRFFQ
Trigger: CTGGAAAAATCTTCCGTGCCATGTATGACTATATGG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACTTCCCGAACACCATTaGCTTATACAGACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLPEHH*LIQTFS
Trigger: AGAAAAAGTCTGTATAAGCCAATGGTGTTCGGGAAG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGATTGGTTACTTTCTTaGCAAATTCTATATCTGGAG +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPDWLLS*QILYLE
Trigger: CTCCAGATATAGAATTTGCCAAGAAAGTAACCAATC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATTCATTTTATACTCTaGTGTTTCGGTCTGCATGAA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPIHFIL*CFGLHE
Trigger: TTCATGCAGACCGAAACACCAGAGTATAAAATGAAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGCATTGACTTTGTGCTaGATAAAAGCAGGAGTATCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKALTLC*IKAGVS
Trigger: TGATACTCCTGCTTTTATCCAGCACAAAGTCAATGC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATATAATCAACGTCGCTaGCAATTGCCTGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKYNQRR*QLPEIS
Trigger: AGAAATCTCAGGCAATTGCCAGCGACGTTGATTATA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGACTGTACTGTAATTaGAGCATCTTCAATCGAGGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERLYCN*SIFNRG
Trigger: ACCTCGATTGAAGATGCTCCAATTACAGTACAGTCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAACATTGAACATATCATaGGGCGTGTTGTATTTGGAC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKTLNIS*GVLYLD
Trigger: GTCCAAATACAACACGCCCCATGATATGTTCAATGT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAAATTTGAGGGTGTCTaGATGTTGCCTGTACTTCTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKKFEGV*MLPVLL
Trigger: AAGAAGTACAGGCAACATCCAGACACCCTCAAATTT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCACATTGTTGCCCTTaGCTATTAAGTCATACCAAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEAHCCP*LLSHTN
Trigger: ATTGGTATGACTTAATAGCCAAGGGCAACAATGTGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGCACATTGTTGCCCTTaGCTATTAAGTCATACCAAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKAHCCP*LLSHTN
Trigger: ATTGGTATGACTTAATAGCCAAGGGCAACAATGTGC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGTATTTATAATCACTaGCAATGTTTCTCGATGCCT +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPCIYNH*QCFSMP
Trigger: AGGCATCGAGAAACATTGCCAGTGATTATAAATACA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATTTTTGCATTATTCTaGGCCAAAACCATGTTCATC +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPIFALF*AKTMFI
Trigger: GATGAACATGGTTTTGGCCCAGAATAATGCAAAAAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTTGCCAAAATAATCTaGGGGATATCAGGCATGATG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEFAKII*GISGMM
Trigger: CATCATGCCTGATATCCCCCAGATTATTTTGGCAAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTTGCCAAAATAATCTaGGGGATATCAGGCATGATG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFAKII*GISGMM
Trigger: CATCATGCCTGATATCCCCCAGATTATTTTGGCAAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGCGATTCATATTCCTaGTCAGCTCAATGTTCATTG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCDSYS*SAQCSL
Trigger: CAATGAACATTGAGCTGACCAGGAATATGAATCGCA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATATCACTCCTATTTTTaGCATTTGTCTTTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPYHSYF*HLSLPE
Trigger: TTCTGGCAAAGACAAATGCCAAAAATAGGAGTGATA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTTTGCTGCTTTGATTaGTATGGCATCAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEFCCFD*YGINRK
Trigger: CTTCCTGTTGATGCCATACCAATCAAAGCAGCAAAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGGTCACTCAAAATCTaGGTGGCTCGTTTATTTTTC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEWSLKI*VARLFF
Trigger: GAAAAATAAACGAGCCACCCAGATTTTGAGTGACCA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGGTCACTCAAAATCTaGGTGGCTCGTTTATTTTTC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKWSLKI*VARLFF
Trigger: GAAAAATAAACGAGCCACCCAGATTTTGAGTGACCA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAAGTCTGACATTTCTTaGCCAGCAAGATGCTTAACA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKKSDIS*PARCLT
Trigger: TGTTAAGCATCTTGCTGGCCAAGAAATGTCAGACTT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGATTCTTCAGGTTTCTaGTTCTGTCATAATCCACTG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEDSSGF*FCHNPL
Trigger: CAGTGGATTATGACAGAACCAGAAACCTGAAGAATC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATGTCGGGCACGATGTaGATTTTCATCTTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEMSGTM*IFILFF
Trigger: AAAGAACAAGATGAAAATCCACATCGTGCCCGACAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATATACCCATATGCCTTaGTGTGTTCATAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEYTHMP*CVHRLL
Trigger: AAGAAGCCTATGAACACACCAAGGCATATGGGTATA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAAGTGCTTCTTGACATaGTCCTTGTACTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKKCFLT*SLYLFS
Trigger: TGAGAACAAGTACAAGGACCATGTCAAGAAGCACTT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAGTGCTTCTTGACATaGTCCTTGTACTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEKCFLT*SLYLFS
Trigger: TGAGAACAAGTACAAGGACCATGTCAAGAAGCACTT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAATGCAGGTTCTCTTTaGCATCTTTTCTGTAAGCGA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTENAGSL*HLFCKR
Trigger: TCGCTTACAGAAAAGATGCCAAAGAGAACCTGCATT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAATGCAGGTTCTCTTTaGCATCTTTTCTGTAAGCGA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKNAGSL*HLFCKR
Trigger: TCGCTTACAGAAAAGATGCCAAAGAGAACCTGCATT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGAGCTGGCTGTCTTTTaGATTGTATTTTGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEELAVF*IVFWCL
Trigger: AAGACACCAAAATACAATCCAAAAGACAGCCAGCTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGTACTGGTAAGAACTaGCAAGTTGGCTTGTATTCA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECTGKN*QVGLYS
Trigger: TGAATACAAGCCAACTTGCCAGTTCTTACCAGTACA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGTACTGGTAAGAACTaGCAAGTTGGCTTGTATTCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCTGKN*QVGLYS
Trigger: TGAATACAAGCCAACTTGCCAGTTCTTACCAGTACA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATACTCTGTAATTCTGTaGCCTCTTTTAGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEYSVIL*PLLGEA
Trigger: AGCTTCACCTAAAAGAGGCCACAGAATTACAGAGTA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATACTCTGTAATTCTGTaGCCTCTTTTAGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKYSVIL*PLLGEA
Trigger: AGCTTCACCTAAAAGAGGCCACAGAATTACAGAGTA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCTCATAATACGACATaGACTTCTCAGCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESHNTT*TSQHLP
Trigger: AGGAAGATGCTGAGAAGTCCATGTCGTATTATGAGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATTTCTGGCGTGTCTTaGACAACTGTAATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKISGVS*TTVIFP
Trigger: AGGAAAAATTACAGTTGTTCAAGACACGCCAGAAAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGAGCTGAAATTCTTCTaGTTTTCTTTTACACGCAGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEELKFF*FSFTRS
Trigger: ACTGCGTGTAAAAGAAAATCAGAAGAATTTCAGCTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGTATAAGATATCACTaGCTTGCTTCGTGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECIRYH*LASCSV
Trigger: AACAGAACACGAAGCAAGTCAGTGATATCTTATACA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGCCTTCTTTGTACTTaGATTCACTTGCAATATCTC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESLLCT*IHLQYL
Trigger: GAGATATTGCAAGTGAATTCAAGTACAAAGAAGGCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGCCTTCTTTGTACTTaGATTCACTTGCAATATCTC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSLLCT*IHLQYL
Trigger: GAGATATTGCAAGTGAATTCAAGTACAAAGAAGGCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTATCAGGCATGACATaGATAGTTTTCTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVSGMT*IVFLSL
Trigger: CAATGACAAGAAAACTATTCATGTCATGCCTGATAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGGCTTCTTTGTACTTaGAATAACTGCTCATGTAAC +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRLLCT*NNCSCN
Trigger: GTTACATGAGCAGTTATTTCAAGTACAAAGAAGCCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACATCTTGAAGAAGTCTaGTTTGTAGATCAACTCACT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKHLEEV*FVDQLT
Trigger: AGTGAGTTGATCTACAAATCAGACTTCTTCAAGATG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACATCTTGAAGAAGTCTaGTTTGTAGATCAACTCACT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEHLEEV*FVDQLT
Trigger: AGTGAGTTGATCTACAAATCAGACTTCTTCAAGATG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATATCAACCACAGAAGTaGAATTGGCTTTCTCCATTT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKYQPQK*NWLSPF
Trigger: AAATGGAGAAAGCCAATTTCACTTCTGTGGTTGATA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATATCAACCACAGAAGTaGAATTGGCTTTCTCCATTT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEYQPQK*NWLSPF
Trigger: AAATGGAGAAAGCCAATTTCACTTCTGTGGTTGATA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR TCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTACTTTTTCTGGCTTaGAAGATTCTTGACTTGTTG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVLFLA*KILDLL
Trigger: CAACAAGTCAAGAATCTTTCAAGCCAGAAAAAGTAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATAGTCTTCGTCATCTaGCATTTTTCCAGAGTAGTA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEIVFVI*HFSRVV
Trigger: TACTACTCTGGAAAAATGGCAGATGACGAAGACTAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACATTATCACTCTGTATaGGATTCATATTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKHYHSV*DSYSWS
Trigger: TGACCAGGAATATGAATCGCATACAGAGTGATAATG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTTCAGTTGCCCTTTTaGATTTTTCCACATCCAAAG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFQLPF*IFPHPK
Trigger: CTTTGGATGTGGAAAAATGCAAAAGGGCAACTGAAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR GCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGGGATATGAACATTTaGTTTGGTATCCTCATAATG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGDMNI*FGILIM
Trigger: CATTATGAGGATACCAAAGCAAATGTTCATATCCCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCAAATCATAGCCCTTaGCAATGGTTTTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESNHSP*QWFSSN
Trigger: ATTGGAAGAAAACCATTGCCAAGGGCTATGATTTGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCACTCATGGTGATTTaGTTTACTCTGGAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSLMVI*FTLESK
Trigger: TTTACTCTCCAGAGTAAACCAAATCACCATGAGTGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGTATTTCTGATCACTaGCATATTCAGTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGISDH*HIQLLS
Trigger: AGAAAGCAACTGAATATGCCAGTGATCAGAAATACC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATAAATGCTTGTTCATaGTATGTGCATTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEINACS*YVHSAW
Trigger: CCAAGCAGAATGCACATACCATGAACAAGCATTTAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTTTGGCTACATTCATaGACAACACAAGTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEFWLHS*TTQVLG
Trigger: ACCCAAAACTTGTGTTGTCCATGAATGTAGCCAAAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTTCACTCTGCATTTTaGCTACATTCATGGACAACA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFHSAF*LHSWTT
Trigger: TGTTGTCCATGAATGTAGCCAAAATGCAGAGTGAAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACACTCAAAATCTGGGTaGCTCGTTTATTTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKHSKSG*LVYFSH
Trigger: ATGAGAAAAATAAACGAGCCACCCAGATTTTGAGTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTGTCTTTCAGTTTGTaGTACAATTCCCGATACAGT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLSFSL*YNSRYS
Trigger: ACTGTATCGGGAATTGTACCACAAACTGAAAGACAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGATTGGTTACTTTCTTaGCAAATTCTATATCTGGAG +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKDWLLS*QILYLE
Trigger: CTCCAGATATAGAATTTGCCAAGAAAGTAACCAATC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGATTGGTTACTTTCTTaGCAAATTCTATATCTGGAG +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEDWLLS*QILYLE
Trigger: CTCCAGATATAGAATTTGCCAAGAAAGTAACCAATC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATTCATTTTATACTCTaGTGTTTCGGTCTGCATGAA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEIHFIL*CFGLHE
Trigger: TTCATGCAGACCGAAACACCAGAGTATAAAATGAAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGAAGATCAGGACTCATaGTGTATTTATGTTTCACAT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEEDQDS*CIYVSH
Trigger: ATGTGAAACATAAATACACCATGAGTCCTGATCTTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGTATTTATAATCACTaGCAATGTTTCTCGATGCCT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECIYNH*QCFSMP
Trigger: AGGCATCGAGAAACATTGCCAGTGATTATAAATACA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGTGTAATGATGCAATaGCTGTTTGTAGTTGACATT +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCVMMQ*LFVVDI
Trigger: AATGTCAACTACAAACAGCCATTGCATCATTACACA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATTTTTGCATTATTCTaGGCCAAAACCATGTTCATC +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEIFALF*AKTMFI
Trigger: GATGAACATGGTTTTGGCCCAGAATAATGCAAAAAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATATCACTCCTATTTTTaGCATTTGTCTTTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEYHSYF*HLSLPE
Trigger: TTCTGGCAAAGACAAATGCCAAAAATAGGAGTGATA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTATCTGGCATAATGTaGACAGTGGTTTTATCTTTA +
Preference number: 4 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVSGIM*TVVLSL
Trigger: TAAAGATAAAACCACTGTCCACATTATGCCAGATAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CCA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCCTTGTACTTTTTCTaGCTTGAAAGATTCTTGACT +
Preference number: 4 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESLYFF*LERFLT
Trigger: AGTCAAGAATCTTTCAAGCCAGAAAAAGTACAAGGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS TCA 90 bp CACCAATGGCTAGCCATGGGAGTGAGCCACCTGGATGTCCTGGCTTaGCTGAGCCCCAGGTGTCTGCCAGCAACATGGGGAGCAGGACTG +
Preference number: 5 (lower is better)
Translates to: HQWLAMGVSHLDVLA*LSPRCLPATWGAGL
Trigger: CAGTCCTGCTCCCCATGTTGCTGGCAGACACCTGGGGCTCAGTCAAGCCAGGACATCCAGGTGGCTCACTCCCATGGCTAGCCATTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480784.1
CDS TCA 90 bp GGTGGTCTGGTGCTTCTGAATGCTCAGACTTCTCCTCACCCCCACTaGTGCTTAGTGCACTGGCAGATCGTGACTGCTCCCGGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: GGLVLLNAQTSPHPH*CLVHWQIVTAPGSG
Trigger: GCCGGAGCCGGGAGCAGTCACGATCTGCCAGTGCACTAAGCATCAGTGGGGGTGAGGAGAAGTCTGAGCATTCAGAAGCACCAGACCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS GCA 90 bp GCTTGGCTGCCTTCTTGGCCATTTCTATGTCTGGGCGACCGAGCATaGTTAAGCCATGGCTGCCTTCCTTGCGGTGCTTGGCTCTGTACT +
Preference number: 5 (lower is better)
Translates to: AWLPSWPFLCLGDRA*LSHGCLPCGAWLCT
Trigger: AGTACAGAGCCAAGCACCGCAAGGAAGGCAGCCATGGCTTAAGCATGCTCGGTCGCCCAGACATAGAAATGGCCAAGAAGGCAGCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS CCA 90 bp TTGGCCTTCCATTTGGCCCAGTCCAGCCGGTACTCTCGTTCATTCTaGAGCTTGTCAGCTATGAGGGCCCAGCGGATCTTGTTGTCATCC +
Preference number: 5 (lower is better)
Translates to: LAFHLAQSSRYSRSF*SLSAMRAQRILLSS
Trigger: GGATGACAACAAGATCCGCTGGGCCCTCATAGCTGACAAGCTCCAGAATGAACGAGAGTACCGGCTGGACTGGGCCAAATGGAAGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 90 bp TGGCGTGTGTCAGGGACAAGGTGCTGGAAGGCAGGATGTAGCTGGTaGCTTTCACTCTATCCCAGGCCTCCTTGTACAGGTTACTGCTGT +
Preference number: 5 (lower is better)
Translates to: WRVSGTRCWKAGCSW*LSLYPRPPCTGYCC
Trigger: ACAGCAGTAACCTGTACAAGGAGGCCTGGGATAGAGTGAAAGCCACCAGCTACATCCTGCCTTCCAGCACCTTGTCCCTGACACACGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 90 bp TCTTGGCGTGTGTCAGGGACAAGGTGCTGGAAGGCAGGATGTAGCTaGTGGCTTTCACTCTATCCCAGGCCTCCTTGTACAGGTTACTGC +
Preference number: 5 (lower is better)
Translates to: SWRVSGTRCWKAGCS*WLSLYPRPPCTGYC
Trigger: GCAGTAACCTGTACAAGGAGGCCTGGGATAGAGTGAAAGCCACCAGCTACATCCTGCCTTCCAGCACCTTGTCCCTGACACACGCCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 90 bp CCCGGTCCAGCTTATATTCAAAATCGCTTTGCTGCAGGGATGACTTaGCAGCCTGGAGGAAGTCCGGTCGGTCAGGAGTCCACTTCCAGT +
Preference number: 5 (lower is better)
Translates to: PGPAYIQNRFAAGMT*QPGGSPVGQESTSS
Trigger: ACTGGAAGTGGACTCCTGACCGACCGGACTTCCTCCAGGCTGCCAAGTCATCCCTGCAGCAAAGCGATTTTGAATATAAGCTGGACCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 90 bp TTCTTGGCCATTTCTATGTCTGGGCGACCGAGCATGCTTAAGCCATaGCTGCCTTCCTTGCGGTGCTTGGCTCTGTACTCCACCTCACTG +
Preference number: 5 (lower is better)
Translates to: FLAISMSGRPSMLKP*LPSLRCLALYSTSL
Trigger: CAGTGAGGTGGAGTACAGAGCCAAGCACCGCAAGGAAGGCAGCCATGGCTTAAGCATGCTCGGTCGCCCAGACATAGAAATGGCCAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS TCA 90 bp TTGTTCTCAGACACCAGGTTGCTGACAGTCTTCGCCAGCAGGATCTaGGGCGTGTCAGGTACGGCATGGCAGGTTCCTCTTTCCTTGACA +
Preference number: 5 (lower is better)
Translates to: LFSDTRLLTVFASRI*GVSGTAWQVPLSLT
Trigger: TGTCAAGGAAAGAGGAACCTGCCATGCCGTACCTGACACGCCTCAGATCCTGCTGGCGAAGACTGTCAGCAACCTGGTGTCTGAGAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 90 bp CACCTCACTGGCCTGTTTGGCTGCCTGTGTGGCCTTCTTGATGTCTaGTCGATCAGCCACTGTGGTGTAATGCAGGTTCTCTTTGGCATC +
Preference number: 5 (lower is better)
Translates to: HLTGLFGCLCGLLDV*SISHCGVMQVLFGI
Trigger: GATGCCAAAGAGAACCTGCATTACACCACAGTGGCTGATCGACCAGACATCAAGAAGGCCACACAGGCAGCCAAACAGGCCAGTGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS TCA 90 bp TGCACTTCAACAGGGTCAGCAGGCGATTGCATGAATGTGGAGGTCTaGGAAGCACTGCTGTTTTCCCCCGATCTTGGCATGACTGGACCA +
Preference number: 5 (lower is better)
Translates to: CTSTGSAGDCMNVEV*EALLFSPDLGMTGP
Trigger: TGGTCCAGTCATGCCAAGATCGGGGGAAAACAGCAGTGCTTCTCAGACCTCCACATTCATGCAATCGCCTGCTGACCCTGTTGAAGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489048.1
CDS TCA 90 bp CGCAGGCTGGTTTTGTATAGATTCGAACTCTGGAGCTTGTATGCATaGAGGGCCCGGTCCAGATCCACGGTTTTGGTAGTTGGAGCCACT +
Preference number: 5 (lower is better)
Translates to: RRLVLYRFELWSLYA*RARSRSTVLVVGAT
Trigger: AGTGGCTCCAACTACCAAAACCGTGGATCTGGACCGGGCCCTTCATGCATACAAGCTCCAGAGTTCGAATCTATACAAAACCAGCCTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 90 bp AAGGGGCCCAGTGAGACACATGACCAATTTTGGAACAGGCTAATCTaGGGACCAGAAGGGCCCGCCAGTGGAAGAGAAAGGACTTGTTTT +
Preference number: 5 (lower is better)
Translates to: KGPSETHDQFWNRLI*GPEGPASGRERTCF
Trigger: AAAACAAGTCCTTTCTCTTCCACTGGCGGGCCCTTCTGGTCCCCAGATTAGCCTGTTCCAAAATTGGTCATGTGTCTCACTGGGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497809.1
CDS CCA 90 bp CTTGTATGCATGAAGGGCCCGGTCCAGATCCACGGTTTTGGTAGTTaGAGCCACTTTGCCTCTGACACTGTGCACATAGTCATAGTGGTA +
Preference number: 5 (lower is better)
Translates to: LVCMKGPVQIHGFGS*SHFASDTVHIVIVV
Trigger: TACCACTATGACTATGTGCACAGTGTCAGAGGCAAAGTGGCTCCAACTACCAAAACCGTGGATCTGGACCGGGCCCTTCATGCATACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 90 bp AGGCTGTGGTCTGGTTTCCAGCGTGATGATGGGGTCTCTCTTTGGTaGCAAGTTCAACATACAGATACTGACTCTGAAGCTTCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: RLWSGFQRDDGVSLW*QVQHTDTDSEASAL
Trigger: GAGGGCAGAAGCTTCAGAGTCAGTATCTGTATGTTGAACTTGCCACCAAAGAGAGACCCCATCATCACGCTGGAAACCAGACCACAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGGGTCTGCCCCTGCTaGGCGGCCAAGACTGACACC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKRVCPC*AAKTDT
Trigger: GGTGTCAGTCTTGGCCGCCAAGCAGGGGCAGACCCT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS TCA 90 bp ATCCTGCATTTTCTGACTGTGTGCAATGTAGGGGGTCATGAACTTTaGAGGATCCACTTTCTTCCGGATGACCTTCCTCCTCTCCACCGG +
Preference number: 5 (lower is better)
Translates to: ILHFLTVCNVGGHEL*RIHFLPDDLPPLHR
Trigger: CCGGTGGAGAGGAGGAAGGTCATCCGGAAGAAAGTGGATCCTTCAAAGTTCATGACCCCCTACATTGCACACAGTCAGAAAATGCAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS TCA 90 bp ATGTGGAGGTCTGAGAAGCACTGCTGTTTTCCCCCGATCTTGGCATaGCTGGACCACGCCTGTCTTAGACTTTCTTTGACCACTCAATCT +
Preference number: 5 (lower is better)
Translates to: MWRSEKHCCFPPILA*LDHACLRLSLTTQS
Trigger: AGATTGAGTGGTCAAAGAAAGTCTAAGACAGGCGTGGTCCAGTCATGCCAAGATCGGGGGAAAACAGCAGTGCTTCTCAGACCTCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489048.1
CDS CCA 90 bp TCAGTGTACAGTTTCTTGCTGAACATGGCGGTGTTCTTAACGGCCTaGACAAGTTCAGGGGCATCAGGAGGAAGCAGGTACTTATCCTTG +
Preference number: 5 (lower is better)
Translates to: SVYSFLLNMAVFLTA*TSSGASGGSRYLSL
Trigger: CAAGGATAAGTACCTGCTTCCTCCTGATGCCCCTGAACTTGTCCAGGCCGTTAAGAACACCGCCATGTTCAGCAAGAAACTGTACACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 90 bp CAGTCTCTCGCTGGTAACATTGTTGACTCTCCGGACGTGGACAAATaGAACATCTTTGGGGCCAAGTGTATACCCATATGCCTTGGTGTG +
Preference number: 5 (lower is better)
Translates to: QSLAGNIVDSPDVDK*NIFGAKCIPICLGV
Trigger: CACACCAAGGCATATGGGTATACACTTGGCCCCAAAGATGTTCCATTTGTCCACGTCCGGAGAGTCAACAATGTTACCAGCGAGAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 90 bp TCCCGATACAGTCTCTCGCTGGTAACATTGTTGACTCTCCGGACGTaGACAAATGGAACATCTTTGGGGCCAAGTGTATACCCATATGCC +
Preference number: 5 (lower is better)
Translates to: SRYSLSLVTLLTLRT*TNGTSLGPSVYPYA
Trigger: GGCATATGGGTATACACTTGGCCCCAAAGATGTTCCATTTGTCCACGTCCGGAGAGTCAACAATGTTACCAGCGAGAGACTGTATCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 90 bp TCAAGGCTGTGGTCTGGTTTCCAGCGTGATGATGGGGTCTCTCTTTaGTGGCAAGTTCAACATACAGATACTGACTCTGAAGCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: SRLWSGFQRDDGVSL*WQVQHTDTDSEASA
Trigger: GGCAGAAGCTTCAGAGTCAGTATCTGTATGTTGAACTTGCCACCAAAGAGAGACCCCATCATCACGCTGGAAACCAGACCACAGCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCCTCTCCACCGGCTTaGCTGATGCTGGCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSSPPA*LMLAVP
Trigger: TGGCACAGCCAGCATCAGCAAAGCCGGTGGAGAGGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCACTTCAGGAGACCCTaGGGGCATCCAGCCAATGCC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHHFRRP*GHPANA
Trigger: GGCATTGGCTGGATGCCCCAAGGGTCTCCTGAAGTG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGGGCCCAGCGGATCTaGTTGTCATCCCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRAQRI*LSSLAV
Trigger: CACAGCCAGGGATGACAACAAGATCCGCTGGGCCCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAGGGTCTGCCCCTGCTaGGCGGCCAAGACTGACACC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRVCPC*AAKTDT
Trigger: GGTGTCAGTCTTGGCCGCCAAGCAGGGGCAGACCCT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 90 bp AAGTGTGATGCTTTGAAATGCCTAAATAGCTTCAACGTAGTTGGCTaGGAGCATTCCGGTCCTGCCAGTCCTCTGCACAGTGCCATACAT +
Preference number: 5 (lower is better)
Translates to: KCDALKCLNSFNVVG*EHSGPASPLHSAIH
Trigger: ATGTATGGCACTGTGCAGAGGACTGGCAGGACCGGAATGCTCCCAGCCAACTACGTTGAAGCTATTTAGGCATTTCAAAGCATCACACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 90 bp TTTTTGGCTGATATTGGCAGAATTACTCTTGGCCAGCAGGATATCTaGGGTGTCTGGCATCACGTGGATGGAGGTTTTGTCAGCATCCCA +
Preference number: 5 (lower is better)
Translates to: FLADIGRITLGQQDI*GVWHHVDGGFVSIP
Trigger: TGGGATGCTGACAAAACCTCCATCCACGTGATGCCAGACACCCCAGATATCCTGCTGGCCAAGAGTAATTCTGCCAATATCAGCCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 90 bp GGGCATGAACAAATGGCACAGCATCTGGAGGCAAAATGTAACCTGTaGCTTTTTGTCTCTCCCAGCCTTCCTTGTAGAGATACTGGTCCA +
Preference number: 5 (lower is better)
Translates to: GHEQMAQHLEAKCNL*LFVSPSLPCRDTGP
Trigger: TGGACCAGTATCTCTACAAGGAAGGCTGGGAGAGACAAAAAGCCACAGGTTACATTTTGCCTCCAGATGCTGTGCCATTTGTTCATGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 90 bp CTGAACGTCATTGCAGTGATGGGCATGAACAAATGGCACAGCATCTaGAGGCAAAATGTAACCTGTGGCTTTTTGTCTCTCCCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LNVIAVMGMNKWHSI*RQNVTCGFLSLPAF
Trigger: GAAGGCTGGGAGAGACAAAAAGCCACAGGTTACATTTTGCCTCCAGATGCTGTGCCATTTGTTCATGCCCATCACTGCAATGACGTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCCTCTCCACCGGCTTaGCTGATGCTGGCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSSPPA*LMLAVP
Trigger: TGGCACAGCCAGCATCAGCAAAGCCGGTGGAGAGGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCGGTCACTCTGCACTTaGGCAATGTGGAGGGACCAC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRSLCT*AMWRDH
Trigger: GTGGTCCCTCCACATTGCCAAAGTGCAGAGTGACCG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACACTTCAGGAGACCCTaGGGGCATCCAGCCAATGCC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKHFRRP*GHPANA
Trigger: GGCATTGGCTGGATGCCCCAAGGGTCTCCTGAAGTG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAACCTCACTGGCCTGTTaGGCTGCCTGTGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKTSLAC*AACVAF
Trigger: GAAGGCCACACAGGCAGCCAAACAGGCCAGTGAGGT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCCTTCCTTGCGGTGCTaGGCTCTGTACTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHPSLRC*ALYSTS
Trigger: TGAGGTGGAGTACAGAGCCAAGCACCGCAAGGAAGG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACCATGGCTGCCTTCCTaGCGGTGCTTGGCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKPWLPS*RCLALY
Trigger: GTACAGAGCCAAGCACCGCAAGGAAGGCAGCCATGG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATACCTGGCTGCTCAGCTaGGCTGCCTTCTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHTWLLS*AAFLAI
Trigger: AATGGCCAAGAAGGCAGCCAAGCTGAGCAGCCAGGT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS TCA 90 bp TGGCTGTGCCAGTGCTGGCTGTGCCAGAGCTGGTTTGGAAGTTTCTaGTTGCTCATAGTCAGATGTCCTTGTTGTCGTAGTCTCATAAAT +
Preference number: 5 (lower is better)
Translates to: WLCQCWLCQSWFGSF*LLIVRCPCCRSLIN
Trigger: ATTTATGAGACTACGACAACAAGGACATCTGACTATGAGCAATCAGAAACTTCCAAACCAGCTCTGGCACAGCCAGCACTGGCACAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS TCA 90 bp TCCTGTACTCTTTCCCACTCTGCATCTGCTGAGACTCTTTGGCAGTaGTGTACGTTGGTGTTTCAAAGTCCAGCATGGGTTTTCCTCGTT +
Preference number: 5 (lower is better)
Translates to: SCTLSHSASAETLWQ*CTLVFQSPAWVFLV
Trigger: AACGAGGAAAACCCATGCTGGACTTTGAAACACCAACGTACATCACTGCCAAAGAGTCTCAGCAGATGCAGAGTGGGAAAGAGTACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434685.5
CDS GCA 90 bp CCCTCACCCGTCTCATCTCGGGGGTATCCAATACATAGGCAGCTTTaGCTTGTATTTGTTTCCGGAAACTATCAGAATAAAGAACCGAGC +
Preference number: 5 (lower is better)
Translates to: PSPVSSRGYPIHRQL*LVFVSGNYQNKEPS
Trigger: GCTCGGTTCTTTATTCTGATAGTTTCCGGAAACAAATACAAGGCAAAGCTGCCTATGTATTGGATACCCCCGAGATGAGACGGGTGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
ENST00000498015.2
CDS GCA 90 bp ATGCCCATGGAATCAGGCACACTTGTGAACTTGACGGTATCTGGGTaGTGTCGATACTTCCTCTCATTTAATGCATCGCCTGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: MPMESGTLVNLTVSG*CRYFLSFNASPAFL
Trigger: CAAGAAAGCAGGCGATGCATTAAATGAGAGGAAGTATCGACAGCACCCAGATACCGTCAAGTTCACAAGTGTGCCTGATTCCATGGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
ENST00000484968.1
CDS CCA 90 bp GAGAAGGCTGAAGTTCTTTTGGTTCTCCCGGACTCTCTGTATCTCTaGGGTGTCCAAAACAGTCTCATAATACGACATGGACTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: EKAEVLLVLPDSLYL*GVQNSLIIRHGLLS
Trigger: GCTGAGAAGTCCATGTCGTATTATGAGACTGTTTTGGACACCCCAGAGATACAGAGAGTCCGGGAGAACCAAAAGAACTTCAGCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGCCAGAGGCGTGAATaGAGCTTGCTGTTCAGCGAG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSQRRE*SLLFSE
Trigger: CTCGCTGAACAGCAAGCTCAATTCACGCCTCTGGCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGCCTGCCTGGCAGCTTaGGCAGCTCTGATGGGAATC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPACLAA*AALMGI
Trigger: GATTCCCATCAGAGCTGCCAAAGCTGCCAGGCAGGC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATGAAGTGCACCAGCTaGGGGTCATCTTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHMKCTS*GSSSRL
Trigger: GAGCCTGGAAGATGACCCCAAGCTGGTGCACTTCAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCGGTCTGACTGCATCTaGGCCACTTGCATGAAGTGC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRSDCI*ATCMKC
Trigger: GCACTTCATGCAAGTGGCCAAGATGCAGTCAGACCG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATATCCCGAGAGGCCTaGGCAGCCACAATGGGAATG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHISREA*AATMGM
Trigger: CATTCCCATTGTGGCTGCCAAGGCCTCTCGGGATAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACGGTCACTCTGCACTTaGGCAATGTGGAGGGACCAC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKRSLCT*AMWRDH
Trigger: GTGGTCCCTCCACATTGCCAAAGTGCAGAGTGACCG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACACTTCAGGAGACCCTaGGGGCATCCAGCCAATGCC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPHFRRP*GHPANA
Trigger: GGCATTGGCTGGATGCCCCAAGGGTCTCCTGAAGTG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCGTTCATTCTGGAGCTaGTCAGCTATGAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRSFWS*SAMRAQ
Trigger: CTGGGCCCTCATAGCTGACAAGCTCCAGAATGAACG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATCTTGGCCTTCCATTaGGCCCAGTCCAGCCGGTAC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKILAFH*AQSSRY
Trigger: GTACCGGCTGGACTGGGCCAAATGGAAGGCCAAGAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCGGACACGGAGTCATTaGGCATCCACCCAATTCCAC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRTRSH*ASTQFH
Trigger: GTGGAATTGGGTGGATGCCAAATGACTCCGTGTCCG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGGGTCTGCCCCTGCTaGGCGGCCAAGACTGACACC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRVCPC*AAKTDT
Trigger: GGTGTCAGTCTTGGCCGCCAAGCAGGGGCAGACCCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGGGTCTGCCCCTGCTaGGCGGCCAAGACTGACACC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERVCPC*AAKTDT
Trigger: GGTGTCAGTCTTGGCCGCCAAGCAGGGGCAGACCCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCGATCGATGTTAAGCTaGCCAACTCGGAGGCACCGT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRSMLS*PTRRHR
Trigger: ACGGTGCCTCCGAGTTGGCAAGCTTAACATCGATCG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTCTCGCTGGTAACATaGTTGACTCTCCGGACGTGG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLSLVT*LTLRTW
Trigger: CCACGTCCGGAGAGTCAACAATGTTACCAGCGAGAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGGGTGTGTCGTGGATaGTGGTGTAGCCTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHWVCRG*WCSLWV
Trigger: AACCCAGAGGCTACACCACAATCCACGACACACCCA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGAAAGCTTGCAACCCTaGAGGAACTCCCGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKESLQP*RNSRSS
Trigger: GCTGGACCGGGAGTTCCTCAAGGGTTGCAAGCTTTC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTCTCAGACACCAGGTaGCTGACAGTCTTCGCCAGC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFSDTR*LTVFAS
Trigger: GCTGGCGAAGACTGTCAGCAACCTGGTGTCTGAGAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGGTCTCTGGTAGTGTaGTGTATGAGCCCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGSLVV*CMSPVP
Trigger: TGGCACAGGGCTCATACACAACACTACCAGAGACCC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAACCTCACTGGCCTGTTaGGCTGCCTGTGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPTSLAC*AACVAF
Trigger: GAAGGCCACACAGGCAGCCAAACAGGCCAGTGAGGT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACCTTCCTTGCGGTGCTaGGCTCTGTACTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKPSLRC*ALYSTS
Trigger: TGAGGTGGAGTACAGAGCCAAGCACCGCAAGGAAGG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACCATGGCTGCCTTCCTaGCGGTGCTTGGCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPPWLPS*RCLALY
Trigger: GTACAGAGCCAAGCACCGCAAGGAAGGCAGCCATGG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 90 bp TCTTTATATTTTACATCACTGACTGTGTCAGTGACTGCTCGGTGGTaGAAATGCTCTGGACGATCAGGAATGGACCTCCAGATACCCAAC +
Preference number: 5 (lower is better)
Translates to: SLYFTSLTVSVTARW*KCSGRSGMDLQIPN
Trigger: GTTGGGTATCTGGAGGTCCATTCCTGATCGTCCAGAGCATTTCCACCACCGAGCAGTCACTGACACAGTCAGTGATGTAAAATATAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000420924.1
ENST00000427231.7
CDS CCA 90 bp ATCACTTTGCTTCTTGGCCACTTCCATAGCATGTTTCACCTCTGGTaGCTCCAGCATGATGGAGTAGTTGGATTTTCCTTTCTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: ITLLLGHFHSMFHLW*LQHDGVVGFSFLLD
Trigger: GTCAAGGAGAAAGGAAAATCCAACTACTCCATCATGCTGGAGCCACCAGAGGTGAAACATGCTATGGAAGTGGCCAAGAAGCAAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS CCA 90 bp GACATCACTTTGCTTCTTGGCCACTTCCATAGCATGTTTCACCTCTaGTGGCTCCAGCATGATGGAGTAGTTGGATTTTCCTTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: DITLLLGHFHSMFHL*WLQHDGVVGFSFLL
Trigger: AAGGAGAAAGGAAAATCCAACTACTCCATCATGCTGGAGCCACCAGAGGTGAAACATGCTATGGAAGTGGCCAAGAAGCAAAGTGATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS CCA 90 bp AACAAGGCTGAAGTTCTTTTGGTTCTCCCGGACTCTCTGTATCTCTaGGGTGTCCAAAACAGTCTCATAATACGACATGGACTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: NKAEVLLVLPDSLYL*GVQNSLIIRHGLLS
Trigger: GCTGAGAAGTCCATGTCGTATTATGAGACTGTTTTGGACACCCCAGAGATACAGAGAGTCCGGGAGAACCAAAAGAACTTCAGCCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434685.5
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCGTGTTGAGCTGGGCTaGCAACAGTACAGGAGAATC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRVELG*QQYRRI
Trigger: GATTCTCCTGTACTGTTGCAAGCCCAGCTCAACACG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTAGCCGCCACGACATaGAACATATCATGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLAATT*NISWGV
Trigger: CACGCCCCATGATATGTTCAATGTCGTGGCGGCTAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGCATCGCCCAGCACATaGTTGCCCTTGGCTATTAAG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHASPST*LPLAIK
Trigger: CTTAATAGCCAAGGGCAACAATGTGCTGGGCGATGC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGCACACTTGTGAACTaGACGGTATCTGGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGTLVN*TVSGCC
Trigger: ACAGCACCCAGATACCGTCAAGTTCACAAGTGTGCC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTTGGTGATGTTGGCTaGGGCATCCTTTGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVGDVG*GILCSR
Trigger: ACGGCTGCAAAGGATGCCCAAGCCAACATCACCAAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATATCCCGAGAGGCCTaGGCAGCCACAATGGGAATG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKISREA*AATMGM
Trigger: CATTCCCATTGTGGCTGCCAAGGCCTCTCGGGATAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACGGTCACTCTGCACTTaGGCAATGTGGAGGGACCAC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRSLCT*AMWRDH
Trigger: GTGGTCCCTCCACATTGCCAAAGTGCAGAGTGACCG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACGTTCATTCTGGAGCTaGTCAGCTATGAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKRSFWS*SAMRAQ
Trigger: CTGGGCCCTCATAGCTGACAAGCTCCAGAATGAACG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATCTTGGCCTTCCATTaGGCCCAGTCCAGCCGGTAC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPILAFH*AQSSRY
Trigger: GTACCGGCTGGACTGGGCCAAATGGAAGGCCAAGAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAACAGGGCTCTGGATCTaGGCCTTCCATTTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPTGLWI*AFHLAQ
Trigger: CTGGGCCAAATGGAAGGCCAAGATCCAGAGCCCTGT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACGGACACGGAGTCATTaGGCATCCACCCAATTCCAC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKRTRSH*ASTQFH
Trigger: GTGGAATTGGGTGGATGCCAAATGACTCCGTGTCCG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGATGCTTCTGGTTCTaGGCGTGTGTCAGGGACAAG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRCFWF*ACVRDK
Trigger: CTTGTCCCTGACACACGCCAAGAACCAGAAGCATCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTAGTTGGAGCCACTTaGCCTCTGACACTGTGCACA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVVGAT*PLTLCT
Trigger: TGTGCACAGTGTCAGAGGCAAAGTGGCTCCAACTAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCGCTGGTAACATTGTaGACTCTCCGGACGTGGACA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSLVTL*TLRTWT
Trigger: TGTCCACGTCCGGAGAGTCAACAATGTTACCAGCGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGCCTCTTGTGTCTTCTaGACTTGGCGGATCTCAGGG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKASCVF*TWRISG
Trigger: CCCTGAGATCCGCCAAGTCAAGAAGACACAAGAGGC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTCACTGACAGCCTCTaGTGTCTTCTTGACTTGGCG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLTDSL*CLLDLA
Trigger: CGCCAAGTCAAGAAGACACAAGAGGCTGTCAGTGAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGCGGCAATGGATCACTaGGGGTGTGTATGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKAAMDH*GCVWQR
Trigger: TCTCTGCCATACACACCCCAAGTGATCCATTGCCGC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATGGGTGTGTCGTGGATaGTGGTGTAGCCTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKWVCRG*WCSLWV
Trigger: AACCCAGAGGCTACACCACAATCCACGACACACCCA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGAAAGCTTGCAACCCTaGAGGAACTCCCGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPESLQP*RNSRSS
Trigger: GCTGGACCGGGAGTTCCTCAAGGGTTGCAAGCTTTC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTCTCAGACACCAGGTaGCTGACAGTCTTCGCCAGC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFSDTR*LTVFAS
Trigger: GCTGGCGAAGACTGTCAGCAACCTGGTGTCTGAGAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACCTTCCTTGCGGTGCTaGGCTCTGTACTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPPSLRC*ALYSTS
Trigger: TGAGGTGGAGTACAGAGCCAAGCACCGCAAGGAAGG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGCTTGGCTGCCTTCTaGGCCATTTCTATGTCTGGG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSLAAF*AISMSG
Trigger: CCCAGACATAGAAATGGCCAAGAAGGCAGCCAAGCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAACCTGGCTGCTCAGCTaGGCTGCCTTCTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPTWLLS*AAFLAI
Trigger: AATGGCCAAGAAGGCAGCCAAGCTGAGCAGCCAGGT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGTAGGGGAGTCCCCTaGCTCAAGTTCTCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGRGVP*LKFSLY
Trigger: GTACAAAGAGAACTTGAGCAAGGGGACTCCCCTACC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397345.8
ENST00000427231.7
CDS TCA 90 bp TCCTATATTCTTTCCCACTCTGCATCTGCTGAGACTCTTTGGCAGTaGTGTACGTTGGTGTTTCAAAGTCCAGCATGGGTTTTCCTCGTT +
Preference number: 5 (lower is better)
Translates to: SYILSHSASAETLWQ*CTLVFQSPAWVFLV
Trigger: AACGAGGAAAACCCATGCTGGACTTTGAAACACCAACGTACATCACTGCCAAAGAGTCTCAGCAGATGCAGAGTGGGAAAGAATATAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS GCA 90 bp AGTCAAGTCTTCTTTATATTTTACATCACTGACTGTGTCAGTGACTaGTCGGTGGTGGAAATGCTCTGGACGATCAGGAATGGACCTCCA +
Preference number: 5 (lower is better)
Translates to: SQVFFIFYITDCVSD*SVVEMLWTIRNGPP
Trigger: TGGAGGTCCATTCCTGATCGTCCAGAGCATTTCCACCACCGAGCAGTCACTGACACAGTCAGTGATGTAAAATATAAAGAAGACTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000420924.1
ENST00000427231.7
CDS GCA 90 bp CCCTCACCCGTCTCATCTCGGGGGTATCCAATACATAGGCAGCTTTaGCTTGTATTTGTTTCCGGAAACTATCAGAATAAAGAACCTGAT +
Preference number: 5 (lower is better)
Translates to: PSPVSSRGYPIHRQL*LVFVSGNYQNKEPD
Trigger: ATCAGGTTCTTTATTCTGATAGTTTCCGGAAACAAATACAAGGCAAAGCTGCCTATGTATTGGATACCCCCGAGATGAGACGGGTGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497809.1
CDS CCA 90 bp AACTATATCCATGGCATCAGGAATGCTGGTGAACTTGTTTCTGTCTaGAGGCTGACGATATTTCTTCTCACTGATGATTTCCGAAGCCCG +
Preference number: 5 (lower is better)
Translates to: NYIHGIRNAGELVSV*RLTIFLLTDDFRSP
Trigger: CGGGCTTCGGAAATCATCAGTGAGAAGAAATATCGTCAGCCTCCAGACAGAAACAAGTTCACCAGCATTCCTGATGCCATGGATATAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 90 bp TTTCAGCTCACTCTGAACGTCATTGCAGTGATGGGCATGAACAAATaGCACAGCATCTGGAGGCAAAATGTAACCTGTGGCTTTTTGTCT +
Preference number: 5 (lower is better)
Translates to: FQLTLNVIAVMGMNK*HSIWRQNVTCGFLS
Trigger: AGACAAAAAGCCACAGGTTACATTTTGCCTCCAGATGCTGTGCCATTTGTTCATGCCCATCACTGCAATGACGTTCAGAGTGAGCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 90 bp TTTCCCACTCTGCATCTGCTGAGACTCTTTGGCAGTGATGTACGTTaGTGTTTCAAAGTCCAGCATGGGTTTTCCTCGTTCCTTTTCATA +
Preference number: 5 (lower is better)
Translates to: FPTLHLLRLFGSDVR*CFKVQHGFSSFLFI
Trigger: TATGAAAAGGAACGAGGAAAACCCATGCTGGACTTTGAAACACCAACGTACATCACTGCCAAAGAGTCTCAGCAGATGCAGAGTGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTGGAGTCACAGTGGTaGGAATGCCTGTTCCCAAGT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLESQW*ECLFPS
Trigger: ACTTGGGAACAGGCATTCCAACCACTGTGACTCCAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCCTCTCCACCGGCTTaGCTGATGCTGGCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSSPPA*LMLAVP
Trigger: TGGCACAGCCAGCATCAGCAAAGCCGGTGGAGAGGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTTCTGGAGTATCTGTaGTGCTGGCGTATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVLEYL*CWRMAV
Trigger: GACAGCCATACGCCAGCACAACAGATACTCCAGAAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACGTGTTGAGCTGGGCTaGCAACAGTACAGGAGAATC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKRVELG*QQYRRI
Trigger: GATTCTCCTGTACTGTTGCAAGCCCAGCTCAACACG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTAAGCTGTTTCGTGTaGAGCTGGGCTTGCAACAGT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLSCFV*SWACNS
Trigger: ACTGTTGCAAGCCCAGCTCAACACGAAACAGCTTAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGCGCATATGCCTTCTaGGCAAGGTCCACATTGATG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSAYAF*ARSTLM
Trigger: CATCAATGTGGACCTTGCCAAGAAGGCATATGCGCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCCTGCCTGGCAGCTTaGGCAGCTCTGATGGGAATC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEACLAA*AALMGI
Trigger: GATTCCCATCAGAGCTGCCAAAGCTGCCAGGCAGGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGCCTGCCTGGCAGCTTaGGCAGCTCTGATGGGAATC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKACLAA*AALMGI
Trigger: GATTCCCATCAGAGCTGCCAAAGCTGCCAGGCAGGC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCGCCCAGCACATTGTaGCCCTTGGCTATTAAGTCA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSPSTL*PLAIKS
Trigger: TGACTTAATAGCCAAGGGCAACAATGTGCTGGGCGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTCTTGCAGCCTTTATaGCAATGGCATCAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLLQPL*QWHQAS
Trigger: TGAGGCCTGATGCCATTGCAATAAAGGCTGCAAGAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATGAAGTGCACCAGCTaGGGGTCATCTTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPMKCTS*GSSSRL
Trigger: GAGCCTGGAAGATGACCCCAAGCTGGTGCACTTCAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTGCATCTTGGCCACTaGCATGAAGTGCACCAGCTT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLHLGH*HEVHQL
Trigger: AAGCTGGTGCACTTCATGCAAGTGGCCAAGATGCAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACGGTCTGACTGCATCTaGGCCACTTGCATGAAGTGC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRSDCI*ATCMKC
Trigger: GCACTTCATGCAAGTGGCCAAGATGCAGTCAGACCG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTTGGTGATGTTGGCTaGGGCATCCTTTGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVGDVG*GILCSR
Trigger: ACGGCTGCAAAGGATGCCCAAGCCAACATCACCAAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTCTTAAACTGGAAGTaGCTCGGGTGCTGGCGGTAT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFLNWK*LGCWRY
Trigger: ATACCGCCAGCACCCGAGCAACTTCCAGTTTAAGAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATACGTGGATGGAGGTTTaGTCAGCATCCCAAGCTTCT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHTWMEV*SASQAS
Trigger: AGAAGCTTGGGATGCTGACAAAACCTCCATCCACGT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACACTTCAGGAGACCCTaGGGGCATCCAGCCAATGCC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEHFRRP*GHPANA
Trigger: GGCATTGGCTGGATGCCCCAAGGGTCTCCTGAAGTG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGGGCCCAGCGGATCTaGTTGTCATCCCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERAQRI*LSSLAV
Trigger: CACAGCCAGGGATGACAACAAGATCCGCTGGGCCCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGGGCCCAGCGGATCTaGTTGTCATCCCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRAQRI*LSSLAV
Trigger: CACAGCCAGGGATGACAACAAGATCCGCTGGGCCCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTAACCTGTGGCTTTTaGTCTCTCCCAGCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVTCGF*SLPAFL
Trigger: AAGGAAGGCTGGGAGAGACAAAAAGCCACAGGTTAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACGATCGATGTTAAGCTaGCCAACTCGGAGGCACCGT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRSMLS*PTRRHR
Trigger: ACGGTGCCTCCGAGTTGGCAAGCTTAACATCGATCG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGACGTGATCATTGACTaGCAAGTCGGGGTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHDVIID*QVGVAN
Trigger: ATTTGCCACCCCGACTTGCAAGTCAATGATCACGTC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCGCTGGTAACATTGTaGACTCTCCGGACGTGGACA +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSLVTL*TLRTWT
Trigger: TGTCCACGTCCGGAGAGTCAACAATGTTACCAGCGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTCTCGCTGGTAACATaGTTGACTCTCCGGACGTGG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLSLVT*LTLRTW
Trigger: CCACGTCCGGAGAGTCAACAATGTTACCAGCGAGAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTGTGTCTTCTTGACTaGGCGGATCTCAGGGGTATC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLCLLD*ADLRGI
Trigger: GATACCCCTGAGATCCGCCAAGTCAAGAAGACACAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGCTTCTGCCCTCGCTaGGCTCTTAAAAGATCAGGA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSFCPR*ALKRSG
Trigger: TCCTGATCTTTTAAGAGCCAAGCGAGGGCAGAAGCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTCTCAGACACCAGGTaGCTGACAGTCTTCGCCAGC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFSDTR*LTVFAS
Trigger: GCTGGCGAAGACTGTCAGCAACCTGGTGTCTGAGAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGGTCTCTGGTAGTGTaGTGTATGAGCCCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGSLVV*CMSPVP
Trigger: TGGCACAGGGCTCATACACAACACTACCAGAGACCC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAACCTCACTGGCCTGTTaGGCTGCCTGTGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTETSLAC*AACVAF
Trigger: GAAGGCCACACAGGCAGCCAAACAGGCCAGTGAGGT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACCATGGCTGCCTTCCTaGCGGTGCTTGGCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEPWLPS*RCLALY
Trigger: GTACAGAGCCAAGCACCGCAAGGAAGGCAGCCATGG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGCTTGGCTGCCTTCTaGGCCATTTCTATGTCTGGG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSLAAF*AISMSG
Trigger: CCCAGACATAGAAATGGCCAAGAAGGCAGCCAAGCT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAAATCCGGAGTTTCATaGGCCATGGCATTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHKSGVS*AMAFRP
Trigger: AGGCCTGAATGCCATGGCCAATGAAACTCCGGATTT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGGTAGGGGAGTCCCCTaGCTCAAGTTCTCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKGRGVP*LKFSLY
Trigger: GTACAAAGAGAACTTGAGCAAGGGGACTCCCCTACC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397345.8
ENST00000427231.7
CDS TCA 90 bp TTTCCGGAAACTATCAGAATAAAGAACCTGATGCAGGAGAGACCGTaGATGAGTGGTGCTGTCCTAAATCTGAAACCTCAAAGCCTTTCC +
Preference number: 5 (lower is better)
Translates to: FPETIRIKNLMQERP*MSGAVLNLKPQSLS
Trigger: GGAAAGGCTTTGAGGTTTCAGATTTAGGACAGCACCACTCATTCACGGTCTCTCCTGCATCAGGTTCTTTATTCTGATAGTTTCCGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497809.1
CDS GCA 90 bp CTCATAAGCTTCCTTGTATTTATAATCACTGGCAATGTTTCTCGATaGCTTGGCTGCAGTGATGGGAATAGCATCGCCCAGCACATTGTT +
Preference number: 5 (lower is better)
Translates to: LISFLVFIITGNVSR*LGCSDGNSIAQHIV
Trigger: AACAATGTGCTGGGCGATGCTATTCCCATCACTGCAGCCAAGGCATCGAGAAACATTGCCAGTGATTATAAATACAAGGAAGCTTATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS GCA 90 bp AGTGTAGAGCCTCTTGTCCATGTTCAGTTTGTTACTCTTGTTAAGTaGCTGTTCCATTGTGTCCATGGCGTAAGTGAACTTCAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: SVEPLVHVQFVTLVK*LFHCVHGVSELQLL
Trigger: GAGAAGCTGAAGTTCACTTACGCCATGGACACAATGGAACAGGCACTTAACAAGAGTAACAAACTGAACATGGACAAGAGGCTCTACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS GCA 90 bp ATCAAAGCACTTACATCACTAAGCTGTTTCGTGTTGAGCTGGGCTTaGAACAGTACAGGAGAATCAGTGACTGCCGTGAATTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: IKALTSLSCFVLSWA*NSTGESVTAVNLVL
Trigger: TAAGACCAAATTCACGGCAGTCACTGATTCTCCTGTACTGTTGCAAGCCCAGCTCAACACGAAACAGCTTAGTGATGTAAGTGCTTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489048.1
CDS CCA 90 bp AACCATTGGTATGGAATCCATAAGGCTGGAAAACTTAAATTGATCTaGGTGCTGACGGTAAACATGGTCACTCAAAATCTGGGTGGCTCG +
Preference number: 5 (lower is better)
Translates to: NHWYGIHKAGKLKLI*VLTVNMVTQNLGGS
Trigger: CGAGCCACCCAGATTTTGAGTGACCATGTTTACCGTCAGCACCCAGATCAATTTAAGTTTTCCAGCCTTATGGATTCCATACCAATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 90 bp ATCTCAGGGGTATCGGGAGTTGTATGGATCTTGTCTTTCAGTTTGTaGTACAATTCCCGATACAGTCTCTCGCTGGTAACATTGTTGACT +
Preference number: 5 (lower is better)
Translates to: ISGVSGVVWILSFSL*YNSRYSLSLVTLLT
Trigger: AGTCAACAATGTTACCAGCGAGAGACTGTATCGGGAATTGTACCACAAACTGAAAGACAAGATCCATACAACTCCCGATACCCCTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 90 bp GGCATTCCAGTAAGCCCTCTTGGCTCTGATGAGGATTGGCGTATCTaGAACCGGAGTGTACTTGTCTTTCATCTTTTCATATTGAATCTT +
Preference number: 5 (lower is better)
Translates to: GIPVSPLGSDEDWRI*NRSVLVFHLFILNL
Trigger: AAGATTCAATATGAAAAGATGAAAGACAAGTACACTCCGGTTCCAGATACGCCAATCCTCATCAGAGCCAAGAGGGCTTACTGGAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000420924.1
ENST00000427231.7
CDS CCA 90 bp ATTCTGTGGCCTCTTTTAGGTGAAGCTGCTCCAGATTATCGGGTATaGTGTGGTAGTGGCCTTTACTCTTCTCATACTTCTTCTTGTACT +
Preference number: 5 (lower is better)
Translates to: ILWPLLGEAAPDYRV*CGSGLYSSHTSSCT
Trigger: AGTACAAGAAGAAGTATGAGAAGAGTAAAGGCCACTACCACACCATACCCGATAATCTGGAGCAGCTTCACCTAAAAGAGGCCACAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
ENST00000483418.1
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACAGGCAGGTCAGGGATaGGAGTTCCTTGTCCTATTG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPQAGQG*EFLVLL
Trigger: CAATAGGACAAGGAACTCCAATCCCTGACCTGCCTG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTGGAGTCACAGTGGTaGGAATGCCTGTTCCCAAGT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLESQW*ECLFPS
Trigger: ACTTGGGAACAGGCATTCCAACCACTGTGACTCCAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCATGTTTGTAAGCTGTaGAGACTGCAAAGACACCCC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHHVCKL*RLQRHP
Trigger: GGGGTGTCTTTGCAGTCTCAACAGCTTACAAACATG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTGCCAGAGCTGGTTaGGAAGTTTCTGATTGCTCA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCARAG*EVSDCS
Trigger: TGAGCAATCAGAAACTTCCAAACCAGCTCTGGCACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTTCTGGAGTATCTGTaGTGCTGGCGTATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVLEYL*CWRMAV
Trigger: GACAGCCATACGCCAGCACAACAGATACTCCAGAAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCAGTGTACAGTTTCTaGCTGAACATGGCGGTGTTC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSVYSF*LNMAVF
Trigger: GAACACCGCCATGTTCAGCAAGAAACTGTACACTGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGGCGTGAATTGAGCTaGCTGTTCAGCGAGACCTTT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKRRELS*LFSETF
Trigger: AAAGGTCTCGCTGAACAGCAAGCTCAATTCACGCCT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGAACAGTATCGAGCTaGAATTTGGGGGTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKRTVSS*NLGVSQ
Trigger: CTGCGAGACCCCCAAATTCAAGCTCGATACTGTTCT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACGTGTTGAGCTGGGCTaGCAACAGTACAGGAGAATC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRVELG*QQYRRI
Trigger: GATTCTCCTGTACTGTTGCAAGCCCAGCTCAACACG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGCATTGACTCTGTGTaGGATAAACTGTGGAGCATC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGIDSV*DKLWSI
Trigger: GATGCTCCACAGTTTATCCAACACAGAGTCAATGCC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTTAGCTTGAGTGACTaGGAGCATATCAAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLSLSD*EHIKRC
Trigger: GCACCTCTTGATATGCTCCAAGTCACTCAAGCTAAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGCGCATATGCCTTCTaGGCAAGGTCCACATTGATG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSAYAF*ARSTLM
Trigger: CATCAATGTGGACCTTGCCAAGAAGGCATATGCGCT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTAGCCGCCACGACATaGAACATATCATGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLAATT*NISWGV
Trigger: CACGCCCCATGATATGTTCAATGTCGTGGCGGCTAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCGCCCAGCACATTGTaGCCCTTGGCTATTAAGTCA +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSPSTL*PLAIKS
Trigger: TGACTTAATAGCCAAGGGCAACAATGTGCTGGGCGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGCATCGCCCAGCACATaGTTGCCCTTGGCTATTAAG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPASPST*LPLAIK
Trigger: CTTAATAGCCAAGGGCAACAATGTGCTGGGCGATGC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATGTTTCTCGATGCCTaGGCTGCAGTGATGGGAATA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHMFLDA*AAVMGI
Trigger: TATTCCCATCACTGCAGCCAAGGCATCGAGAAACAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTCTTGCAGCCTTTATaGCAATGGCATCAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLLQPL*QWHQAS
Trigger: TGAGGCCTGATGCCATTGCAATAAAGGCTGCAAGAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTAGTGTTGGTGATGTaGGCTTGGGCATCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLVLVM*AWASFA
Trigger: TGCAAAGGATGCCCAAGCCAACATCACCAACACTAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCACTGGCATATTCAGTaGCTTTCTTGGCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHHWHIQ*LSWPSP
Trigger: TGGAGAAGGCCAAGAAAGCAACTGAATATGCCAGTG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTATGTGCATTCTGCTaGGCAAGCACCATGTCCATG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVCAFC*ASTMSM
Trigger: CATGGACATGGTGCTTGCCAAGCAGAATGCACATAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAAGTTTTGGGTCATCTaGCAGACTCCGGAATCCAAC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHKFWVI*QTPESN
Trigger: GTTGGATTCCGGAGTCTGCAAGATGACCCAAAACTT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGGACAACACAAGTTTaGGGTCATCTTGCAGACTCC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHWTTQV*GHLADS
Trigger: GGAGTCTGCAAGATGACCCAAAACTTGTGTTGTCCA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAATTCTCCAGCTCTCTaGGCCCTAACAACTTCCAAG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHNSPAL*ALTTSK
Trigger: CTTGGAAGTTGTTAGGGCCAAGAGAGCTGGAGAATT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTGGCAGAATTACTCTaGGCCAGCAGGATATCTGGG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLAELL*ASRISG
Trigger: CCCAGATATCCTGCTGGCCAAGAGTAATTCTGCCAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATCTTGGCCTTCCATTaGGCCCAGTCCAGCCGGTAC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKILAFH*AQSSRY
Trigger: GTACCGGCTGGACTGGGCCAAATGGAAGGCCAAGAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAACAGGGCTCTGGATCTaGGCCTTCCATTTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTETGLWI*AFHLAQ
Trigger: CTGGGCCAAATGGAAGGCCAAGATCCAGAGCCCTGT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTAACCTGTGGCTTTTaGTCTCTCCCAGCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVTCGF*SLPAFL
Trigger: AAGGAAGGCTGGGAGAGACAAAAAGCCACAGGTTAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGGTCGTATGATTTCTaGGCATGGAGGATTTGGGGT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRSYDF*AWRIWG
Trigger: ACCCCAAATCCTCCATGCCAAGAAATCATACGACCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTAGTTGGAGCCACTTaGCCTCTGACACTGTGCACA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVVGAT*PLTLCT
Trigger: TGTGCACAGTGTCAGAGGCAAAGTGGCTCCAACTAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCCAGATCCACGGTTTaGGTAGTTGGAGCCACTTTG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSRSTV*VVGATL
Trigger: CAAAGTGGCTCCAACTACCAAAACCGTGGATCTGGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCAGGGGTATCGGGAGTaGTATGGATCTTGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHQGYRE*YGSCLS
Trigger: TGAAAGACAAGATCCATACAACTCCCGATACCCCTG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTCACTGACAGCCTCTaGTGTCTTCTTGACTTGGCG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLTDSL*CLLDLA
Trigger: CGCCAAGTCAAGAAGACACAAGAGGCTGTCAGTGAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGCTTCTGCCCTCGCTaGGCTCTTAAAAGATCAGGA +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSFCPR*ALKRSG
Trigger: TCCTGATCTTTTAAGAGCCAAGCGAGGGCAGAAGCT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACACTTCCAGTGGGCTTaGTTGGCTTCGTACTGTTTC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKHFQWA*LASYCF
Trigger: GAAACAGTACGAAGCCAACAAAGCCCACTGGAAGTG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGAAAGCTTGCAACCCTaGAGGAACTCCCGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEESLQP*RNSRSS
Trigger: GCTGGACCGGGAGTTCCTCAAGGGTTGCAAGCTTTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGAAAGCTTGCAACCCTaGAGGAACTCCCGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKESLQP*RNSRSS
Trigger: GCTGGACCGGGAGTTCCTCAAGGGTTGCAAGCTTTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTGCCAAGTGCTTCTaGACATGGTCCTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCAKCF*TWSLYL
Trigger: CAAGTACAAGGACCATGTCAAGAAGCACTTGGCACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTAAGCGACATCACTTaGCTTCTTGGCCACTTCCAT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVSDIT*LLGHFH
Trigger: ATGGAAGTGGCCAAGAAGCAAAGTGATGTCGCTTAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACCTTCCTTGCGGTGCTaGGCTCTGTACTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEPSLRC*ALYSTS
Trigger: TGAGGTGGAGTACAGAGCCAAGCACCGCAAGGAAGG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAACCTGGCTGCTCAGCTaGGCTGCCTTCTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTETWLLS*AAFLAI
Trigger: AATGGCCAAGAAGGCAGCCAAGCTGAGCAGCCAGGT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAACCTGGCTGCTCAGCTaGGCTGCCTTCTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKTWLLS*AAFLAI
Trigger: AATGGCCAAGAAGGCAGCCAAGCTGAGCAGCCAGGT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAAATCCGGAGTTTCATaGGCCATGGCATTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKKSGVS*AMAFRP
Trigger: AGGCCTGAATGCCATGGCCAATGAAACTCCGGATTT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS TCA 90 bp ACTGGTAAGAACTGGCAAGTTGGCTTGTATTCAGGACATGATTCATaGTCAGAGACTCCTTCATGTCAGTCACGGGTTTGTGAAGTTTCT +
Preference number: 5 (lower is better)
Translates to: TGKNWQVGLYSGHDS*SETPSCQSRVCEVS
Trigger: AGAAACTTCACAAACCCGTGACTGACATGAAGGAGTCTCTGATCATGAATCATGTCCTGAATACAAGCCAACTTGCCAGTTCTTACCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
ENST00000483418.1
CDS TCA 90 bp CACTGGTATTGGAGCTGGCTTGAAAGATTCTTGACTTGTTGGGCATaGATGATCTCTGGAGTATCAACCACAGAAGTGAAATTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: HWYWSWLERFLTCWA*MISGVSTTEVKLAF
Trigger: GAAAGCCAATTTCACTTCTGTGGTTGATACTCCAGAGATCATTCATGCCCAACAAGTCAAGAATCTTTCAAGCCAGCTCCAATACCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424585.1
CDS GCA 90 bp TTGAACATTTATGATGGCATCTCCATCCTTGAAGGACACCTCATCTaGATCAGCAGCCATATAGTCATACATGGCACGGAAGATTTTTCC +
Preference number: 5 (lower is better)
Translates to: LNIYDGISILEGHLI*ISSHIVIHGTEDFS
Trigger: GGAAAAATCTTCCGTGCCATGTATGACTATATGGCTGCTGATGCAGATGAGGTGTCCTTCAAGGATGGAGATGCCATCATAAATGTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS GCA 90 bp ATGTTCATCGAGTCCATGAGTGTGGAATACTTCAAAGTGTCTGGGTaGTGGCGGTACTTCTTTTCACTAATAATCTCCATGGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: MFIESMSVEYFKVSG*WRYFFSLIISMAFL
Trigger: CAAGAAAGCCATGGAGATTATTAGTGAAAAGAAGTACCGCCAGCACCCAGACACTTTGAAGTATTCCACACTCATGGACTCGATGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS GCA 90 bp TTTCTTATAGTCCAGATTGGTGTTGACTTTGTAGGCGTCCTTGGCTaGTTTGATATGAACAGCATCTGGCTCAATGGTGCAGTTGGATTT +
Preference number: 5 (lower is better)
Translates to: FLIVQIGVDFVGVLG*FDMNSIWLNGAVGF
Trigger: AAATCCAACTGCACCATTGAGCCAGATGCTGTTCATATCAAAGCAGCCAAGGACGCCTACAAAGTCAACACCAATCTGGACTATAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 90 bp ATTGTAGGCATTAACTTTAGCCTGGATGAACTGGGGCAGGTCTGGTaGCAGGTTGTATTTGTGAATAATTTCCTCTCCTTTGGCTTTGTA +
Preference number: 5 (lower is better)
Translates to: IVGINFSLDELGQVW*QVVFVNNFLSFGFV
Trigger: TACAAAGCCAAAGGAGAGGAAATTATTCACAAATACAACCTGCCACCAGACCTGCCCCAGTTCATCCAGGCTAAAGTTAATGCCTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 90 bp GATATTGTAGGCATTAACTTTAGCCTGGATGAACTGGGGCAGGTCTaGTGGCAGGTTGTATTTGTGAATAATTTCCTCTCCTTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: DIVGINFSLDELGQV*WQVVFVNNFLSFGF
Trigger: AAAGCCAAAGGAGAGGAAATTATTCACAAATACAACCTGCCACCAGACCTGCCCCAGTTCATCCAGGCTAAAGTTAATGCCTACAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 90 bp GATCTGGCTCCACATATGCGAATTGTAGAGAGCAGTCAACATATCTaGACGCAGAATTTCATTACATCCATGTTGCAGAAACATCTTGGC +
Preference number: 5 (lower is better)
Translates to: DLAPHMRIVESSQHI*TQNFITSMLQKHLG
Trigger: GCCAAGATGTTTCTGCAACATGGATGTAATGAAATTCTGCGTCCAGATATGTTGACTGCTCTCTACAATTCGCATATGTGGAGCCAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397345.8
ENST00000420924.1
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGAGTTCCTTGTCCTATaGCTTCCTTATACTTCACCG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHEFLVL*LPYTSP
Trigger: CGGTGAAGTATAAGGAAGCAATAGGACAAGGAACTC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTCCCCAGGTTCTCTTaGTATAACACCGAGCTAATG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFPRFS*YNTELM
Trigger: CATTAGCTCGGTGTTATACAAAGAGAACCTGGGGAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGATATTTCACCGTaGAGATGTGCCGTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKHDISP*RCAVGS
Trigger: AGACCCAACGGCACATCTCAACGGTGAAATATCATG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGTGTGAAGCAACCCTaGTGTTTCTCAAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGVKQP*CFSKSS
Trigger: TGAAGACTTTGAGAAACACAAGGGTTGCTTCACACC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCAGTGTACAGTTTCTaGCTGAACATGGCGGTGTTC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSVYSF*LNMAVF
Trigger: GAACACCGCCATGTTCAGCAAGAAACTGTACACTGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGCCAGAGGCGTGAATaGAGCTTGCTGTTCAGCGAG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSQRRE*SLLFSE
Trigger: CTCGCTGAACAGCAAGCTCAATTCACGCCTCTGGCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCTTTGTATTTTACCTaGCTAGCTGCCACACCAGCT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSLYFT*LAATPA
Trigger: AGCTGGTGTGGCAGCTAGCAAGGTAAAATACAAAGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTCAGTTGTTTGGAATaGACTTGGGCTTGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLSCLE*TWACSR
Trigger: TCTGCTACAAGCCCAAGTCAATTCCAAACAACTGAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTAAGCTGTTTCGTGTaGAGCTGGGCTTGCAACAGT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLSCFV*SWACNS
Trigger: ACTGTTGCAAGCCCAGCTCAACACGAAACAGCTTAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGCTGGTATATGGCACTaGAACTTCTCACCTTCATGT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHAGIWH*NFSPSC
Trigger: ACATGAAGGTGAGAAGTTCAAGTGCCATATACCAGC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTCTGAAGCTCGCTTaGCCTTTTCCATTTCTAAGG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCLKLA*PFPFLR
Trigger: CCTTAGAAATGGAAAAGGCAAAGCGAGCTTCAGACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCAGTTTAGGGTCATCTaGAAGACTTTGGAAGCCAAC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHQFRVI*KTLEAN
Trigger: GTTGGCTTCCAAAGTCTTCAAGATGACCCTAAACTG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCGCCCAGCACATTGTaGCCCTTGGCTATTAAGTCA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSPSTL*PLAIKS
Trigger: TGACTTAATAGCCAAGGGCAACAATGTGCTGGGCGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTTTTGCAGCAACAATaGGGATGGCATCTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFLQQQ*GWHLVS
Trigger: TGAGACCAGATGCCATCCCAATTGTTGCTGCAAAAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATACTGAGAAATCCAACTaGCTTGCCTTTGGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHTEKSN*LAFGFL
Trigger: GAGAAAGCCAAAGGCAAGCAAGTTGGATTTCTCAGT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCTTCCCAGCCAGCTTaGTACAGTTTATCACTCATG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSSQPA*YSLSLM
Trigger: CATGAGTGATAAACTGTACAAAGCTGGCTGGGAAGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATGAAGTGCACCAGCTaGGGGTCATCTTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEMKCTS*GSSSRL
Trigger: GAGCCTGGAAGATGACCCCAAGCTGGTGCACTTCAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATGGAATGGACTAATTaGGGATCATCCTCGAGACTG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHMEWTN*GSSSRL
Trigger: CAGTCTCGAGGATGATCCCAAATTAGTCCATTCCAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTTGGTGATGTTGGCTaGGGCATCCTTTGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVGDVG*GILCSR
Trigger: ACGGCTGCAAAGGATGCCCAAGCCAACATCACCAAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCAGCTCAATGTTCATaGCATCTGGAAGGAGGATGT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSAQCS*HLEGGC
Trigger: ACATCCTCCTTCCAGATGCAATGAACATTGAGCTGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTATGTGCATTCTGCTaGGCAAGCACCATGTCCATG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVCAFC*ASTMSM
Trigger: CATGGACATGGTGCTTGCCAAGCAGAATGCACATAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATTTCCGAAGCCCGCTaGTTCTTTTCTGCCTCTAAA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHISEAR*FFSASK
Trigger: TTTAGAGGCAGAAAAGAACAAGCGGGCTTCGGAAAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTGCGAAAGCCTTCCTaGTACTTGTATTCACTGGCA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLRKPS*YLYSLA
Trigger: TGCCAGTGAATACAAGTACAAGGAAGGCTTTCGCAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATATCCCGAGAGGCCTaGGCAGCCACAATGGGAATG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKISREA*AATMGM
Trigger: CATTCCCATTGTGGCTGCCAAGGCCTCTCGGGATAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAGGGACCACATTATCTaGGGGTCATCGTGTACTGCT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRDHII*GSSCTA
Trigger: AGCAGTACACGATGACCCCAAGATAATGTGGTCCCT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAATTCTCCAGCTCTCTaGGCCCTAACAACTTCCAAG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKNSPAL*ALTTSK
Trigger: CTTGGAAGTTGTTAGGGCCAAGAGAGCTGGAGAATT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATATCTCTTGAAGCCTaGGCTGCTTGGATTGGAATG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHISLEA*AAWIGM
Trigger: CATTCCAATCCAAGCAGCCAAGGCTTCAAGAGATAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTAATGCATGTGAATTaGAGCTGGTCTGCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVMHVN*SWSAGW
Trigger: CCAGCCTGCAGACCAGCTCAAATTCACATGCATTAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCATAGTCCTTCATCTTaGATTCATCCCATCCCTTGG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHHSPSS*IHPIPW
Trigger: CCAAGGGATGGGATGAATCAAAGATGAAGGACTATG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGAGGCCTTGGCACTTTaGATGGAAATAGCATCTGCT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKEALAL*MEIASA
Trigger: AGCAGATGCTATTTCCATCAAAAGTGCCAAGGCCTC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACGTTCATTCTGGAGCTaGTCAGCTATGAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRSFWS*SAMRAQ
Trigger: CTGGGCCCTCATAGCTGACAAGCTCCAGAATGAACG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACGGACACGGAGTCATTaGGCATCCACCCAATTCCAC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERTRSH*ASTQFH
Trigger: GTGGAATTGGGTGGATGCCAAATGACTCCGTGTCCG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACGGACACGGAGTCATTaGGCATCCACCCAATTCCAC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRTRSH*ASTQFH
Trigger: GTGGAATTGGGTGGATGCCAAATGACTCCGTGTCCG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTAACCTGTGGCTTTTaGTCTCTCCCAGCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVTCGF*SLPAFL
Trigger: AAGGAAGGCTGGGAGAGACAAAAAGCCACAGGTTAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACGCACTCCTCATCTTTaGGAAATCCAGACAGTGAAC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKRTPHL*EIQTVN
Trigger: GTTCACTGTCTGGATTTCCAAAAGATGAGGAGTGCG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGGTCGTATGATTTCTaGGCATGGAGGATTTGGGGT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKRSYDF*AWRIWG
Trigger: ACCCCAAATCCTCCATGCCAAGAAATCATACGACCT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACGATCGATGTTAAGCTaGCCAACTCGGAGGCACCGT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERSMLS*PTRRHR
Trigger: ACGGTGCCTCCGAGTTGGCAAGCTTAACATCGATCG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACGATCGATGTTAAGCTaGCCAACTCGGAGGCACCGT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRSMLS*PTRRHR
Trigger: ACGGTGCCTCCGAGTTGGCAAGCTTAACATCGATCG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTCTTCTGGGAATCCTaGGCAGTAACCATCTCTACC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFFWES*AVTIST
Trigger: GGTAGAGATGGTTACTGCCAAGGATTCCCAGAAGAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATGCCTTTCAGCCAGTaGAGGTCATCCTTGTATACA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHMPFSQ*RSSLYT
Trigger: TGTATACAAGGATGACCTCAACTGGCTGAAAGGCAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCCAGATCCACGGTTTaGGTAGTTGGAGCCACTTTG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSRSTV*VVGATL
Trigger: CAAAGTGGCTCCAACTACCAAAACCGTGGATCTGGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTGCGCAGGCTGGTTTaGTATAGATTCGAACTCTGG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVRRLV*YRFELW
Trigger: CCAGAGTTCGAATCTATACAAAACCAGCCTGCGCAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATACAAATGGAACATCTTaGGGGCCAAGTGTATACCCA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHTNGTS*GPSVYP
Trigger: TGGGTATACACTTGGCCCCAAAGATGTTCCATTTGT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACTCTCGCTGGTAACATaGTTGACTCTCCGGACGTGG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLSLVT*LTLRTW
Trigger: CCACGTCCGGAGAGTCAACAATGTTACCAGCGAGAG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGCCTCTTGTGTCTTCTaGACTTGGCGGATCTCAGGG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKASCVF*TWRISG
Trigger: CCCTGAGATCCGCCAAGTCAAGAAGACACAAGAGGC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCCTCTTGTGTCTTCTaGACTTGGCGGATCTCAGGG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEASCVF*TWRISG
Trigger: CCCTGAGATCCGCCAAGTCAAGAAGACACAAGAGGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCGGCAATGGATCACTaGGGGTGTGTATGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEAAMDH*GCVWQR
Trigger: TCTCTGCCATACACACCCCAAGTGATCCATTGCCGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTGTCTCGCATCTTCCTaGCCTTATCAGTGTATAGGT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHCLASS*PYQCIG
Trigger: ACCTATACACTGATAAGGCAAGGAAGATGCGAGACA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTGTCAAGCACCACTTaGTATTTGTCTCGCATCTTC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVSSTT*YLSRIF
Trigger: GAAGATGCGAGACAAATACAAAGTGGTGCTTGACAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGGGTGTGTCGTGGATaGTGGTGTAGCCTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEWVCRG*WCSLWV
Trigger: AACCCAGAGGCTACACCACAATCCACGACACACCCA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATACTTCATCTTTAACCTaGCGGACATGCAGCAACATG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHTSSLT*RTCSNM
Trigger: CATGTTGCTGCATGTCCGCAAGGTTAAAGATGAAGT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTCTTGACATGGTCCTaGTACTTGTTCTCAGACACC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFLTWS*YLFSDT
Trigger: GGTGTCTGAGAACAAGTACAAGGACCATGTCAAGAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGGTCTCTGGTAGTGTaGTGTATGAGCCCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGSLVV*CMSPVP
Trigger: TGGCACAGGGCTCATACACAACACTACCAGAGACCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTAAGAACTGGCAAGTaGGCTTGTATTCAGGACATG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVRTGK*ACIQDM
Trigger: CATGTCCTGAATACAAGCCAACTTGCCAGTTCTTAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTTGAGTGGCATTCTTaGCTCTTAGCATGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFEWHS*LLACQV
Trigger: CACCTGACATGCTAAGAGCAAAGAATGCCACTCAAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS GCA 90 bp ATCACTCTGTATGCGATTCATATTCCTGGTCAGCTCAATGTTCATTaGATCTGGAAGGAGGATGTACTTGTGAATCAGGTGCTTGTAGTT +
Preference number: 5 (lower is better)
Translates to: ITLYAIHIPGQLNVH*IWKEDVLVNQVLVV
Trigger: AACTACAAGCACCTGATTCACAAGTACATCCTCCTTCCAGATGCAATGAACATTGAGCTGACCAGGAATATGAATCGCATACAGAGTGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 90 bp CTGTATGCGATTCATATTCCTGGTCAGCTCAATGTTCATTGCATCTaGAAGGAGGATGTACTTGTGAATCAGGTGCTTGTAGTTAGTGTT +
Preference number: 5 (lower is better)
Translates to: LYAIHIPGQLNVHCI*KEDVLVNQVLVVSV
Trigger: AACACTAACTACAAGCACCTGATTCACAAGTACATCCTCCTTCCAGATGCAATGAACATTGAGCTGACCAGGAATATGAATCGCATACAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAAGGTCACACTGGTATaGGAGAAGGCTGAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKKVTLV*EKAEVL
Trigger: AAGAACTTCAGCCTTCTCCAATACCAGTGTGACCTT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAATGTGGTCCTGTGTTaGTTTCACTCTCATCATCTC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHNVVLC*FHSHHL
Trigger: GAGATGATGAGAGTGAAACAAACACAGGACCACATT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACAGGCAGGTCAGGGATaGGAGTTCCTTGTCCTATTG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEQAGQG*EFLVLL
Trigger: CAATAGGACAAGGAACTCCAATCCCTGACCTGCCTG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACAGGCAGGTCAGGGATaGGAGTTCCTTGTCCTATTG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKQAGQG*EFLVLL
Trigger: CAATAGGACAAGGAACTCCAATCCCTGACCTGCCTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACTGGAGTCACAGTGGTaGGAATGCCTGTTCCCAAGT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLESQW*ECLFPS
Trigger: ACTTGGGAACAGGCATTCCAACCACTGTGACTCCAG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACTGGAGTCACAGTGGTaGGAATGCCTGTTCCCAAGT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELESQW*ECLFPS
Trigger: ACTTGGGAACAGGCATTCCAACCACTGTGACTCCAG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACATGATATTTCACCGTaGAGATGTGCCGTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPHDISP*RCAVGS
Trigger: AGACCCAACGGCACATCTCAACGGTGAAATATCATG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGGAGCTCTGTGGTTTTaGCATGTTTGTAAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKGALWF*HVCKLL
Trigger: CAACAGCTTACAAACATGCAAAAACCACAGAGCTCC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGTGCCAGAGCTGGTTaGGAAGTTTCTGATTGCTCA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPCARAG*EVSDCS
Trigger: TGAGCAATCAGAAACTTCCAAACCAGCTCTGGCACA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCGTATGGCTGTCCTTTaGTTTTCTCAAACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRMAVL*FSQTSP
Trigger: AGGAGAAGTTTGAGAAAACAAAAGGACAGCCATACG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTTCTGGAGTATCTGTaGTGCTGGCGTATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVLEYL*CWRMAV
Trigger: GACAGCCATACGCCAGCACAACAGATACTCCAGAAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCAGTGTACAGTTTCTaGCTGAACATGGCGGTGTTC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSVYSF*LNMAVF
Trigger: GAACACCGCCATGTTCAGCAAGAAACTGTACACTGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAAGTCACTCAGTTGTTaGGAATTGACTTGGGCTTGT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHKSLSC*ELTWAC
Trigger: ACAAGCCCAAGTCAATTCCAAACAACTGAGTGACTT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCAGCTGAGTATCAAGTaGATATTTTGGGGTCTCACA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHQLSIK*IFWGLT
Trigger: TGTGAGACCCCAAAATATCAACTTGATACTCAGCTG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGCTGGTATATGGCACTaGAACTTCTCACCTTCATGT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKAGIWH*NFSPSC
Trigger: ACATGAAGGTGAGAAGTTCAAGTGCCATATACCAGC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGCATTGACTCTGTGTaGGATAAACTGTGGAGCATC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGIDSV*DKLWSI
Trigger: GATGCTCCACAGTTTATCCAACACAGAGTCAATGCC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCTGAGATTTCTTAGCTaGAGTGACTTGGAGCATATC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLRFLS*SDLEHI
Trigger: GATATGCTCCAAGTCACTCAAGCTAAGAAATCTCAG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGGTCATATCCCTTCTaGCTCAAGTCTTTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRSYPF*LKSFKS
Trigger: AGACTTGAAAGACTTGAGCAAGAAGGGATATGACCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACAGTTTAGGGTCATCTaGAAGACTTTGGAAGCCAAC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKQFRVI*KTLEAN
Trigger: GTTGGCTTCCAAAGTCTTCAAGATGACCCTAAACTG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATATCATGGGGCGTGTaGTATTTGGACTTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHISWGV*YLDFVF
Trigger: GAAGACAAAGTCCAAATACAACACGCCCCATGATAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGCACATTGTTGCCCTaGGCTATTAAGTCATACCAA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSTLLP*AIKSYQ
Trigger: TTGGTATGACTTAATAGCCAAGGGCAACAATGTGCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCATCGCCCAGCACATaGTTGCCCTTGGCTATTAAG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEASPST*LPLAIK
Trigger: CTTAATAGCCAAGGGCAACAATGTGCTGGGCGATGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGCACACTTGTGAACTaGACGGTATCTGGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGTLVN*TVSGCC
Trigger: ACAGCACCCAGATACCGTCAAGTTCACAAGTGTGCC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACTGCATCTTGGCCACTaGCATGAAGTGCACCAGCTT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELHLGH*HEVHQL
Trigger: AAGCTGGTGCACTTCATGCAAGTGGCCAAGATGCAG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTCTCATATCCCTTCTaGTATTCCCGGTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFSYPF*YSRSDC
Trigger: GCAGTCAGACCGGGAATACAAGAAGGGATATGAGAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTAGTGTTGGTGATGTaGGCTTGGGCATCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLVLVM*AWASFA
Trigger: TGCAAAGGATGCCCAAGCCAACATCACCAACACTAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGGACAACACAAGTTTaGGGTCATCTTGCAGACTCC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPWTTQV*GHLADS
Trigger: GGAGTCTGCAAGATGACCCAAAACTTGTGTTGTCCA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATTTCCGAAGCCCGCTaGTTCTTTTCTGCCTCTAAA +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKISEAR*FFSASK
Trigger: TTTAGAGGCAGAAAAGAACAAGCGGGCTTCGGAAAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACACTGGAGATCAGACTaGTACATATTATCGCTCTGG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKHWRSD*YILSLW
Trigger: CCAGAGCGATAATATGTACAAGTCTGATCTCCAGTG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTGATGGCATTATTTTaGGCCAACACTTGTTCCAGA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVMALF*ANTCSR
Trigger: TCTGGAACAAGTGTTGGCCAAAAATAATGCCATCAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397345.8
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACGCACTCCTCATCTTTaGGAAATCCAGACAGTGAAC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRTPHL*EIQTVN
Trigger: GTTCACTGTCTGGATTTCCAAAAGATGAGGAGTGCG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGATGCTTCTGGTTCTaGGCGTGTGTCAGGGACAAG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERCFWF*ACVRDK
Trigger: CTTGTCCCTGACACACGCCAAGAACCAGAAGCATCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGATGCTTCTGGTTCTaGGCGTGTGTCAGGGACAAG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRCFWF*ACVRDK
Trigger: CTTGTCCCTGACACACGCCAAGAACCAGAAGCATCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTCTTCTGGGAATCCTaGGCAGTAACCATCTCTACC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFFWES*AVTIST
Trigger: GGTAGAGATGGTTACTGCCAAGGATTCCCAGAAGAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATGCCTTTCAGCCAGTaGAGGTCATCCTTGTATACA +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKMPFSQ*RSSLYT
Trigger: TGTATACAAGGATGACCTCAACTGGCTGAAAGGCAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTAGTTGGAGCCACTTaGCCTCTGACACTGTGCACA +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVVGAT*PLTLCT
Trigger: TGTGCACAGTGTCAGAGGCAAAGTGGCTCCAACTAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAACAAATGGAACATCTTaGGGGCCAAGTGTATACCCA +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKTNGTS*GPSVYP
Trigger: TGGGTATACACTTGGCCCCAAAGATGTTCCATTTGT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCGCTGGTAACATTGTaGACTCTCCGGACGTGGACA +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESLVTL*TLRTWT
Trigger: TGTCCACGTCCGGAGAGTCAACAATGTTACCAGCGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCGCTGGTAACATTGTaGACTCTCCGGACGTGGACA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSLVTL*TLRTWT
Trigger: TGTCCACGTCCGGAGAGTCAACAATGTTACCAGCGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGAGTTGTATGGATCTaGTCTTTCAGTTTGTGGTAC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGVVWI*SFSLWY
Trigger: GTACCACAAACTGAAAGACAAGATCCATACAACTCC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACAGGGGTATCGGGAGTaGTATGGATCTTGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPQGYRE*YGSCLS
Trigger: TGAAAGACAAGATCCATACAACTCCCGATACCCCTG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACTCACTGACAGCCTCTaGTGTCTTCTTGACTTGGCG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELTDSL*CLLDLA
Trigger: CGCCAAGTCAAGAAGACACAAGAGGCTGTCAGTGAG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGAGTCGGCAACATACTaGAAATCTGACTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHESATY*KSDFVL
Trigger: AAGGACAAAGTCAGATTTCAAGTATGTTGCCGACTC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATACTTGAAATGCCTATaGATCGGAGAGTCGGCAACA +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKYLKCL*IGESAT
Trigger: TGTTGCCGACTCTCCGATCAATAGGCATTTCAAGTA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCGCTGATTTGTTTGTaGACTTTTGTAGTACGCAGG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSLICL*TFVVRR
Trigger: CCTGCGTACTACAAAAGTCAACAAACAAATCAGCGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGTGCCAAGTGCTTCTaGACATGGTCCTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPCAKCF*TWSLYL
Trigger: CAAGTACAAGGACCATGTCAAGAAGCACTTGGCACA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAACATCACTTTGCTTCTaGGCCACTTCCATAGCATGT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKTSLCF*ATSIAC
Trigger: ACATGCTATGGAAGTGGCCAAGAAGCAAAGTGATGT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTAAGCGACATCACTTaGCTTCTTGGCCACTTCCAT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVSDIT*LLGHFH
Trigger: ATGGAAGTGGCCAAGAAGCAAAGTGATGTCGCTTAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGCTTGGCTGCCTTCTaGGCCATTTCTATGTCTGGG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESLAAF*AISMSG
Trigger: CCCAGACATAGAAATGGCCAAGAAGGCAGCCAAGCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTCTTCAGGTCAGCCTaGTATTTAACCTCACTTGCA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHFFRSA*YLTSLA
Trigger: TGCAAGTGAGGTTAAATACAAGGCTGACCTGAAGAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAACTGGCAAGTTGGCTaGTATTCAGGACATGATTCA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHNWQVG*YSGHDS
Trigger: TGAATCATGTCCTGAATACAAGCCAACTTGCCAGTT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS TCA 90 bp GGAATGAAGTTGTGCAGCCTGCTTTGTGTAATGAATAAACTTCCTTaGTGCAATAGAGCTCAGGAAGTTCCTACAGGTCAAATCCTTTCT +
Preference number: 5 (lower is better)
Translates to: GMKLCSLLCVMNKLP*CNRAQEVPTGQILS
Trigger: AGAAAGGATTTGACCTGTAGGAACTTCCTGAGCTCTATTGCATCAAGGAAGTTTATTCATTACACAAAGCAGGCTGCACAACTTCATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497809.1
CDS CCA 90 bp GTTGACTTTGTAGGCGTCCTTGGCTGCTTTGATATGAACAGCATCTaGCTCAATGGTGCAGTTGGATTTATTTCTTTGGTATACTTCTTT +
Preference number: 5 (lower is better)
Translates to: VDFVGVLGCFDMNSI*LNGAVGFISLVYFF
Trigger: AAAGAAGTATACCAAAGAAATAAATCCAACTGCACCATTGAGCCAGATGCTGTTCATATCAAAGCAGCCAAGGACGCCTACAAAGTCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAAGGTCACACTGGTATaGGAGAAGGCTGAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPKVTLV*EKAEVL
Trigger: AAGAACTTCAGCCTTCTCCAATACCAGTGTGACCTT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAATGTGGTCCTGTGTTaGTTTCACTCTCATCATCTC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKNVVLC*FHSHHL
Trigger: GAGATGATGAGAGTGAAACAAACACAGGACCACATT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTTCCCAAGTTTTCTTaGTACATAACCGAGCTAATG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVPKFS*YITELM
Trigger: CATTAGCTCGGTTATGTACAAAGAAAACTTGGGAAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTCCCCAGGTTCTCTTaGTATAACACCGAGCTAATG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFPRFS*YNTELM
Trigger: CATTAGCTCGGTGTTATACAAAGAGAACCTGGGGAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATAGGCAGCTTTGCCTaGTATTTGTTTCCGGAAACT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKIGSFA*YLFPET
Trigger: AGTTTCCGGAAACAAATACAAGGCAAAGCTGCCTAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGTGTGAAGCAACCCTaGTGTTTCTCAAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGVKQP*CFSKSS
Trigger: TGAAGACTTTGAGAAACACAAGGGTTGCTTCACACC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAATAGTCTCCTGATCTaGGTCATTCCGTTTTTGTTC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHNSLLI*VIPFLF
Trigger: GAACAAAAACGGAATGACCAAGATCAGGAGACTATT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGAGCTCTGTGGTTTTaGCATGTTTGTAAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGALWF*HVCKLL
Trigger: CAACAGCTTACAAACATGCAAAAACCACAGAGCTCC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCTTCCCGAACACCATaGGCTTATACAGACTTTTTC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSSRTP*AYTDFF
Trigger: GAAAAAGTCTGTATAAGCCAATGGTGTTCGGGAAGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACGTATGGCTGTCCTTTaGTTTTCTCAAACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKRMAVL*FSQTSP
Trigger: AGGAGAAGTTTGAGAAAACAAAAGGACAGCCATACG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGCTGCGACACTTTCTTaGCATGTTCAATATCCTTTG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKAATLS*HVQYPL
Trigger: CAAAGGATATTGAACATGCAAAGAAAGTGTCGCAGC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGGCGTGAATTGAGCTaGCTGTTCAGCGAGACCTTT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERRELS*LFSETF
Trigger: AAAGGTCTCGCTGAACAGCAAGCTCAATTCACGCCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGGCGTGAATTGAGCTaGCTGTTCAGCGAGACCTTT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRRELS*LFSETF
Trigger: AAAGGTCTCGCTGAACAGCAAGCTCAATTCACGCCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCATTCTGGCATTaGCAACTTCAAAGCAAGGTG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKHSFWH*QLQSKV
Trigger: CACCTTGCTTTGAAGTTGCAAATGCCAGAATGAATG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGAACAGTATCGAGCTaGAATTTGGGGGTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRTVSS*NLGVSQ
Trigger: CTGCGAGACCCCCAAATTCAAGCTCGATACTGTTCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGAACAGTATCGAGCTaGAATTTGGGGGTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERTVSS*NLGVSQ
Trigger: CTGCGAGACCCCCAAATTCAAGCTCGATACTGTTCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTCAGTTGTTTGGAATaGACTTGGGCTTGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLSCLE*TWACSR
Trigger: TCTGCTACAAGCCCAAGTCAATTCCAAACAACTGAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAAGTCACTCAGTTGTTaGGAATTGACTTGGGCTTGT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKKSLSC*ELTWAC
Trigger: ACAAGCCCAAGTCAATTCCAAACAACTGAGTGACTT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGCGCATATGCCTTCTaGGCAAGGTCCACATTGATG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSAYAF*ARSTLM
Trigger: CATCAATGTGGACCTTGCCAAGAAGGCATATGCGCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGTCTGAAGCTCGCTTaGCCTTTTCCATTTCTAAGG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPCLKLA*PFPFLR
Trigger: CCTTAGAAATGGAAAAGGCAAAGCGAGCTTCAGACA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATATCATGGGGCGTGTaGTATTTGGACTTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKISWGV*YLDFVF
Trigger: GAAGACAAAGTCCAAATACAACACGCCCCATGATAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTTTTGCAGCAACAATaGGGATGGCATCTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFLQQQ*GWHLVS
Trigger: TGAGACCAGATGCCATCCCAATTGTTGCTGCAAAAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAACTGAGAAATCCAACTaGCTTGCCTTTGGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPTEKSN*LAFGFL
Trigger: GAGAAAGCCAAAGGCAAGCAAGTTGGATTTCTCAGT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTGTCCATGTTCAGTTaGTTACTCTTGTTAAGTGCC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLSMFS*LLLLSA
Trigger: GGCACTTAACAAGAGTAACAAACTGAACATGGACAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCTTCCCAGCCAGCTTaGTACAGTTTATCACTCATG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSSQPA*YSLSLM
Trigger: CATGAGTGATAAACTGTACAAAGCTGGCTGGGAAGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACTCTTGCAGCCTTTATaGCAATGGCATCAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLLQPL*QWHQAS
Trigger: TGAGGCCTGATGCCATTGCAATAAAGGCTGCAAGAG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTCTTAAACTGGAAGTaGCTCGGGTGCTGGCGGTAT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEFLNWK*LGCWRY
Trigger: ATACCGCCAGCACCCGAGCAACTTCCAGTTTAAGAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTCTTAAACTGGAAGTaGCTCGGGTGCTGGCGGTAT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFLNWK*LGCWRY
Trigger: ATACCGCCAGCACCCGAGCAACTTCCAGTTTAAGAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTATGTGCATTCTGCTaGGCAAGCACCATGTCCATG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVCAFC*ASTMSM
Trigger: CATGGACATGGTGCTTGCCAAGCAGAATGCACATAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATTTCCGAAGCCCGCTaGTTCTTTTCTGCCTCTAAA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPISEAR*FFSASK
Trigger: TTTAGAGGCAGAAAAGAACAAGCGGGCTTCGGAAAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGAGGCTTTTGCTGCTTaGATTGGTATGGCATCAACA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPEAFAA*IGMAST
Trigger: TGTTGATGCCATACCAATCAAAGCAGCAAAAGCCTC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTGCGAAAGCCTTCCTaGTACTTGTATTCACTGGCA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLRKPS*YLYSLA
Trigger: TGCCAGTGAATACAAGTACAAGGAAGGCTTTCGCAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGGGACCACATTATCTaGGGGTCATCGTGTACTGCT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERDHII*GSSCTA
Trigger: AGCAGTACACGATGACCCCAAGATAATGTGGTCCCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTCTCAAAATCTTTCTaGTACTCACGGTCACTCTGC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFSKSF*YSRSLC
Trigger: GCAGAGTGACCGTGAGTACAAGAAAGATTTTGAGAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTAATGCATGTGAATTaGAGCTGGTCTGCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVMHVN*SWSAGW
Trigger: CCAGCCTGCAGACCAGCTCAAATTCACATGCATTAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCTGTGTATAAATGCTaGCTCATTGTCAGGGCATTA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSVYKC*LIVRAL
Trigger: TAATGCCCTGACAATGAGCAAGCATTTATACACAGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAACGTGGATGGAGGTTTaGTCAGCATCCCAAGCTTCT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTETWMEV*SASQAS
Trigger: AGAAGCTTGGGATGCTGACAAAACCTCCATCCACGT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAACGTGGATGGAGGTTTaGTCAGCATCCCAAGCTTCT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKTWMEV*SASQAS
Trigger: AGAAGCTTGGGATGCTGACAAAACCTCCATCCACGT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTGGCAGAATTACTCTaGGCCAGCAGGATATCTGGG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELAELL*ASRISG
Trigger: CCCAGATATCCTGCTGGCCAAGAGTAATTCTGCCAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTGGCAGAATTACTCTaGGCCAGCAGGATATCTGGG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLAELL*ASRISG
Trigger: CCCAGATATCCTGCTGGCCAAGAGTAATTCTGCCAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACATAGTCCTTCATCTTaGATTCATCCCATCCCTTGG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPHSPSS*IHPIPW
Trigger: CCAAGGGATGGGATGAATCAAAGATGAAGGACTATG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTGGATAATGTCGTTTaGATCCGGCATGCATGTCCA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLDNVV*IRHACP
Trigger: TGGACATGCATGCCGGATCAAAACGACATTATCCAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATATTCTGGGCGTTTTaGACTCTCAACACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKIFWAF*TLNTSG
Trigger: TCCTGAAGTGTTGAGAGTCAAAAACGCCCAGAATAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTCCACAGGCGTAAAGTaGAGAGTTTCTATTTTTGTG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHSTGVK*RVSIFV
Trigger: CACAAAAATAGAAACTCTCAACTTTACGCCTGTGGA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATAGGATGACACATCCATaGGTGCAAGTAATTACGATA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHRMTHP*VQVITI
Trigger: TATCGTAATTACTTGCACCAATGGATGTGTCATCCT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCATCGTCAACACTTCTaGGTAACGTATAAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHHRQHF*VTYKEL
Trigger: AAGCTCTTTATACGTTACCAAGAAGTGTTGACGATG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGACGTGATCATTGACTaGCAAGTCGGGGTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKDVIID*QVGVAN
Trigger: ATTTGCCACCCCGACTTGCAAGTCAATGATCACGTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCCAGATCCACGGTTTaGGTAGTTGGAGCCACTTTG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESRSTV*VVGATL
Trigger: CAAAGTGGCTCCAACTACCAAAACCGTGGATCTGGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTGCGCAGGCTGGTTTaGTATAGATTCGAACTCTGG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVRRLV*YRFELW
Trigger: CCAGAGTTCGAATCTATACAAAACCAGCCTGCGCAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTGCGCAGGCTGGTTTaGTATAGATTCGAACTCTGG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVRRLV*YRFELW
Trigger: CCAGAGTTCGAATCTATACAAAACCAGCCTGCGCAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAACAAATGGAACATCTTaGGGGCCAAGTGTATACCCA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPTNGTS*GPSVYP
Trigger: TGGGTATACACTTGGCCCCAAAGATGTTCCATTTGT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATCTTGTCTTTCAGTTaGTGGTACAATTCCCGATAC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHILSFS*WYNSRY
Trigger: GTATCGGGAATTGTACCACAAACTGAAAGACAAGAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTGTGTCTTCTTGACTaGGCGGATCTCAGGGGTATC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELCLLD*ADLRGI
Trigger: GATACCCCTGAGATCCGCCAAGTCAAGAAGACACAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTGTGTCTTCTTGACTaGGCGGATCTCAGGGGTATC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLCLLD*ADLRGI
Trigger: GATACCCCTGAGATCCGCCAAGTCAAGAAGACACAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGAACCGGAGTGTACTaGTCTTTCATCTTTTCATAT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGTGVY*SFIFSY
Trigger: ATATGAAAAGATGAAAGACAAGTACACTCCGGTTCC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGAGTCGGCAACATACTaGAAATCTGACTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKESATY*KSDFVL
Trigger: AAGGACAAAGTCAGATTTCAAGTATGTTGCCGACTC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATACTTGAAATGCCTATaGATCGGAGAGTCGGCAACA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPYLKCL*IGESAT
Trigger: TGTTGCCGACTCTCCGATCAATAGGCATTTCAAGTA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCGCTGATTTGTTTGTaGACTTTTGTAGTACGCAGG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSLICL*TFVVRR
Trigger: CCTGCGTACTACAAAAGTCAACAAACAAATCAGCGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTCCAGTGGGCTTTGTaGGCTTCGTACTGTTTCTTA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFQWAL*ASYCFL
Trigger: TAAGAAACAGTACGAAGCCAACAAAGCCCACTGGAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACACTTCCAGTGGGCTTaGTTGGCTTCGTACTGTTTC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKHFQWA*LASYCF
Trigger: GAAACAGTACGAAGCCAACAAAGCCCACTGGAAGTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACACTTCCAGTGGGCTTaGTTGGCTTCGTACTGTTTC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEHFQWA*LASYCF
Trigger: GAAACAGTACGAAGCCAACAAAGCCCACTGGAAGTG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCAGTGACAGAAAGCTaGCAACCCTTGAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESVTES*QPLRNS
Trigger: GGAGTTCCTCAAGGGTTGCAAGCTTTCTGTCACTGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCAGTGACAGAAAGCTaGCAACCCTTGAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSVTES*QPLRNS
Trigger: GGAGTTCCTCAAGGGTTGCAAGCTTTCTGTCACTGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAACATCACTTTGCTTCTaGGCCACTTCCATAGCATGT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPTSLCF*ATSIAC
Trigger: ACATGCTATGGAAGTGGCCAAGAAGCAAAGTGATGT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGAGCTGGCTGTCTTTaGGATTGTATTTTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKRAGCL*DCILVS
Trigger: AGACACCAAAATACAATCCAAAAGACAGCCAGCTCT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTCTTCAGGTCAGCCTaGTATTTAACCTCACTTGCA +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFFRSA*YLTSLA
Trigger: TGCAAGTGAGGTTAAATACAAGGCTGACCTGAAGAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTAAGAACTGGCAAGTaGGCTTGTATTCAGGACATG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVRTGK*ACIQDM
Trigger: CATGTCCTGAATACAAGCCAACTTGCCAGTTCTTAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTTGAGTGGCATTCTTaGCTCTTAGCATGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFEWHS*LLACQV
Trigger: CACCTGACATGCTAAGAGCAAAGAATGCCACTCAAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCCGGAGTTTCATaGGCCATGGCATTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEKSGVS*AMAFRP
Trigger: AGGCCTGAATGCCATGGCCAATGAAACTCCGGATTT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTCCCCAGGTTTTCTTaGTATAGCACCGAACTAAAG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVPRFS*YSTELK
Trigger: CTTTAGTTCGGTGCTATACAAAGAAAACCTGGGGAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397345.8
ENST00000427231.7
CDS CCA 90 bp AATCCCGTTTATAACAGACGTCACTTATATTGTAAGCATTGCACTTaGCCTGGAGAAACTGAGGAAGATCAGGACTCATGGTGTATTTAT +
Preference number: 5 (lower is better)
Translates to: NPVYNRRHLYCKHCT*PGETEEDQDSWCIY
Trigger: ATAAATACACCATGAGTCCTGATCTTCCTCAGTTTCTCCAGGCCAAGTGCAATGCTTACAATATAAGTGACGTCTGTTATAAACGGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 90 bp AGGCCTCCTTGTACAGGTTACTGCTGTAAAGATTCTTCAGGTTTCTaGTTCTGTCATAATCCACTGTTTCTAGAACTGTTGTGTATTTGT +
Preference number: 5 (lower is better)
Translates to: RPPCTGYCCKDSSGF*FCHNPLFLELLCIC
Trigger: ACAAATACACAACAGTTCTAGAAACAGTGGATTATGACAGAACCAGAAACCTGAAGAATCTTTACAGCAGTAACCTGTACAAGGAGGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAATGTGGTCCTGTGTTaGTTTCACTCTCATCATCTC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPNVVLC*FHSHHL
Trigger: GAGATGATGAGAGTGAAACAAACACAGGACCACATT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTTCCCAAGTTTTCTTaGTACATAACCGAGCTAATG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVPKFS*YITELM
Trigger: CATTAGCTCGGTTATGTACAAAGAAAACTTGGGAAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTCCCCAGGTTTTCTTaGTATAGCACCGAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVPRFS*YSTELK
Trigger: CTTTAGCTCGGTGCTATACAAAGAAAACCTGGGGAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397337.6
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATAGGCAGCTTTGCCTaGTATTTGTTTCCGGAAACT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPIGSFA*YLFPET
Trigger: AGTTTCCGGAAACAAATACAAGGCAAAGCTGCCTAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACATGATATTTCACCGTaGAGATGTGCCGTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKHDISP*RCAVGS
Trigger: AGACCCAACGGCACATCTCAACGGTGAAATATCATG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAATAGTCTCCTGATCTaGGTCATTCCGTTTTTGTTC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKNSLLI*VIPFLF
Trigger: GAACAAAAACGGAATGACCAAGATCAGGAGACTATT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACATGTTTGTAAGCTGTaGAGACTGCAAAGACACCCC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKHVCKL*RLQRHP
Trigger: GGGGTGTCTTTGCAGTCTCAACAGCTTACAAACATG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACATGTTTGTAAGCTGTaGAGACTGCAAAGACACCCC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEHVCKL*RLQRHP
Trigger: GGGGTGTCTTTGCAGTCTCAACAGCTTACAAACATG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGACAAGTGTGATGCTTaGAAATGCCTAAATAGCTTC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKDKCDA*KCLNSF
Trigger: GAAGCTATTTAGGCATTTCAAAGCATCACACTTGTC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCTTCCCGAACACCATaGGCTTATACAGACTTTTTC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSSRTP*AYTDFF
Trigger: GAAAAAGTCTGTATAAGCCAATGGTGTTCGGGAAGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACGTATGGCTGTCCTTTaGTTTTCTCAAACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRMAVL*FSQTSP
Trigger: AGGAGAAGTTTGAGAAAACAAAAGGACAGCCATACG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATCATGTTCAATATCCTTaGCTTTTTCATCTACGTGAC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHHVQYP*LFHLRD
Trigger: GTCACGTAGATGAAAAAGCAAAGGATATTGAACATG...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGCTGCGACACTTTCTTaGCATGTTCAATATCCTTTG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPAATLS*HVQYPL
Trigger: CAAAGGATATTGAACATGCAAAGAAAGTGTCGCAGC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGTCTTCTTTGTATTTTaGCTTGCTCACTTGATTGGT +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHVFFVF*LAHLIG
Trigger: ACCAATCAAGTGAGCAAGCAAAAATACAAAGAAGAC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATGGTGTCTCACTCCATTaGCCTTTGATTTTATTTTCA +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHGVSLH*PLILFS
Trigger: TGAAAATAAAATCAAAGGCAAATGGAGTGAGACACC...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACATTCATTCTGGCATTaGCAACTTCAAAGCAAGGTG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPHSFWH*QLQSKV
Trigger: CACCTTGCTTTGAAGTTGCAAATGCCAGAATGAATG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTTTCCTTGTATAGTTaGTCACTTAGGGCATCTCCT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFSLYS*SLRASP
Trigger: AGGAGATGCCCTAAGTGACAAACTATACAAGGAAAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGGAGAGTCTGTAACTaGGGTGAATTTTGTCTTATC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKRRVCN*GEFCLI
Trigger: GATAAGACAAAATTCACCCAAGTTACAGACTCTCCT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACAGCTGAGTATCAAGTaGATATTTTGGGGTCTCACA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPQLSIK*IFWGLT
Trigger: TGTGAGACCCCAAAATATCAACTTGATACTCAGCTG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGCATTGACTCTGTGTaGGATAAACTGTGGAGCATC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGIDSV*DKLWSI
Trigger: GATGCTCCACAGTTTATCCAACACAGAGTCAATGCC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACTTAGCTTGAGTGACTaGGAGCATATCAAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELSLSD*EHIKRC
Trigger: GCACCTCTTGATATGCTCCAAGTCACTCAAGCTAAG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACTTAGCTTGAGTGACTaGGAGCATATCAAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLSLSD*EHIKRC
Trigger: GCACCTCTTGATATGCTCCAAGTCACTCAAGCTAAG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACTGAGATTTCTTAGCTaGAGTGACTTGGAGCATATC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLRFLS*SDLEHI
Trigger: GATATGCTCCAAGTCACTCAAGCTAAGAAATCTCAG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAGGTCATATCCCTTCTaGCTCAAGTCTTTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRSYPF*LKSFKS
Trigger: AGACTTGAAAGACTTGAGCAAGAAGGGATATGACCT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATGTTTCTCGATGCCTaGGCTGCAGTGATGGGAATA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKMFLDA*AAVMGI
Trigger: TATTCCCATCACTGCAGCCAAGGCATCGAGAAACAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATATTCCTTGAACTTTTaGCAGCAACAATTGGGATGG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKYSLNF*QQQLGW
Trigger: CCATCCCAATTGTTGCTGCAAAAAGTTCAAGGAATA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTCTCATATCCCTTCTaGTATTCCCGGTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFSYPF*YSRSDC
Trigger: GCAGTCAGACCGGGAATACAAGAAGGGATATGAGAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTCTCATATCCCTTCTaGTATTCCCGGTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEFSYPF*YSRSDC
Trigger: GCAGTCAGACCGGGAATACAAGAAGGGATATGAGAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATGTGGACTTTGGTTTaGTCAGCCTCCCATGCTTGT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKMWTLV*SASHAC
Trigger: ACAAGCATGGGAGGCTGACAAAACCAAAGTCCACAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATGTGGACTTTGGTTTaGTCAGCCTCCCATGCTTGT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEMWTLV*SASHAC
Trigger: ACAAGCATGGGAGGCTGACAAAACCAAAGTCCACAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTAGTGTTGGTGATGTaGGCTTGGGCATCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELVLVM*AWASFA
Trigger: TGCAAAGGATGCCCAAGCCAACATCACCAACACTAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACACTGGCATATTCAGTaGCTTTCTTGGCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKHWHIQ*LSWPSP
Trigger: TGGAGAAGGCCAAGAAAGCAACTGAATATGCCAGTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAAGTTTTGGGTCATCTaGCAGACTCCGGAATCCAAC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKKFWVI*QTPESN
Trigger: GTTGGATTCCGGAGTCTGCAAGATGACCCAAAACTT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATAAACTTTCTTAGCTaGCACAACATCGTTCTGATC +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHINFLS*HNIVLI
Trigger: GATCAGAACGATGTTGTGCAAGCTAAGAAAGTTTAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTCTCAAAATCTTTCTaGTACTCACGGTCACTCTGC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFSKSF*YSRSLC
Trigger: GCAGAGTGACCGTGAGTACAAGAAAGATTTTGAGAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAATTCTCCAGCTCTCTaGGCCCTAACAACTTCCAAG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKNSPAL*ALTTSK
Trigger: CTTGGAAGTTGTTAGGGCCAAGAGAGCTGGAGAATT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATATAAATGCTTGCTCATaGTCAGGGCATTATTCTTTG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHINACS*SGHYSL
Trigger: CAAAGAATAATGCCCTGACAATGAGCAAGCATTTAT...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGAGGCCTTGGCACTTTaGATGGAAATAGCATCTGCT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEEALAL*MEIASA
Trigger: AGCAGATGCTATTTCCATCAAAAGTGCCAAGGCCTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATTGAAGTTTTATCCTaGTCCCAAACCTCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKIEVLS*SQTSLY
Trigger: GTACAGAGAGGTTTGGGACAAGGATAAAACTTCAAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACTGGCATTATGTGTATaGAAGTTTTATCCTTGTCCC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLALCV*KFYPCP
Trigger: GGGACAAGGATAAAACTTCAATACACATAATGCCAG...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCCACAGGCGTAAAGTaGAGAGTTTCTATTTTTGTG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSTGVK*RVSIFV
Trigger: CACAAAAATAGAAACTCTCAACTTTACGCCTGTGGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGAGGATCTCGCCACTTaGTTTCGCTGTCACATAATC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKEDLAT*FRCHII
Trigger: GATTATGTGACAGCGAAACAAAGTGGCGAGATCCTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGAGGATCTCGCCACTTaGTTTCGCTGTCACATAATC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEEDLAT*FRCHII
Trigger: GATTATGTGACAGCGAAACAAAGTGGCGAGATCCTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAAGGATGACACATCCATaGGTGCAAGTAATTACGATA +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKRMTHP*VQVITI
Trigger: TATCGTAATTACTTGCACCAATGGATGTGTCATCCT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACGCACTCCTCATCTTTaGGAAATCCAGACAGTGAAC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERTPHL*EIQTVN
Trigger: GTTCACTGTCTGGATTTCCAAAAGATGAGGAGTGCG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTCTTCTGGGAATCCTaGGCAGTAACCATCTCTACC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFFWES*AVTIST
Trigger: GGTAGAGATGGTTACTGCCAAGGATTCCCAGAAGAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACAGTTGAGGTCATCCTaGTATACAATATCGCTGATC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPQLRSS*YTISLI
Trigger: GATCAGCGATATTGTATACAAGGATGACCTCAACTG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGCTTGTAGTCATTCCTaGTTTTCAACATGTGAGCTT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKACSHS*FSTCEL
Trigger: AAGCTCACATGTTGAAAACAAGGAATGACTACAAGC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATCTTGTCTTTCAGTTaGTGGTACAATTCCCGATAC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKILSFS*WYNSRY
Trigger: GTATCGGGAATTGTACCACAAACTGAAAGACAAGAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACAGGGGTATCGGGAGTaGTATGGATCTTGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEQGYRE*YGSCLS
Trigger: TGAAAGACAAGATCCATACAACTCCCGATACCCCTG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGAGTCGGCAACATACTaGAAATCTGACTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPESATY*KSDFVL
Trigger: AAGGACAAAGTCAGATTTCAAGTATGTTGCCGACTC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGTGCCAAGTGCTTCTaGACATGGTCCTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCAKCF*TWSLYL
Trigger: CAAGTACAAGGACCATGTCAAGAAGCACTTGGCACA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTAAGCGACATCACTTaGCTTCTTGGCCACTTCCAT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVSDIT*LLGHFH
Trigger: ATGGAAGTGGCCAAGAAGCAAAGTGATGTCGCTTAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTAAGCGACATCACTTaGCTTCTTGGCCACTTCCAT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVSDIT*LLGHFH
Trigger: ATGGAAGTGGCCAAGAAGCAAAGTGATGTCGCTTAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTCTCAGCATCTTCCTaGTACTTTTTCTGGCTTGAA +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFSASS*YFFWLE
Trigger: TTCAAGCCAGAAAAAGTACAAGGAAGATGCTGAGAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAACATTTGCTCAAGTTCTCTTaGTACAATATCGAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: NHRQLENLGNSGESKPKHLLKFS*YNIELK
Trigger: CTTTAGCTCGATATTGTACAAAGAGAACTTGAGCAA...ATGTTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397345.8
ENST00000427231.7
CDS GCA 90 bp CTTACTGACTTGCTGCGACACTTTCTTTGCATGTTCAATATCCTTTaGTTTTTCATCTACGTGACATATAGTCTTAGCAACATCACCATC +
Preference number: 5 (lower is better)
Translates to: LTDLLRHFLCMFNIL*FFIYVTYSLSNITI
Trigger: GATGGTGATGTTGCTAAGACTATATGTCACGTAGATGAAAAAGCAAAGGATATTGAACATGCAAAGAAAGTGTCGCAGCAAGTCAGTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS GCA 90 bp AGCTTCTCTATAAAGTCTATCACTCCTATTTTTGGCATTTGTCTTTaGCAGAACTATATCCATGGCATCAGGAATGCTGGTGAACTTGTT +
Preference number: 5 (lower is better)
Translates to: SFSIKSITPIFGICL*QNYIHGIRNAGELV
Trigger: AACAAGTTCACCAGCATTCCTGATGCCATGGATATAGTTCTGGCAAAGACAAATGCCAAAAATAGGAGTGATAGACTTTATAGAGAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAGGTCACACTGGTATaGGAGAAGGCTGAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEKVTLV*EKAEVL
Trigger: AAGAACTTCAGCCTTCTCCAATACCAGTGTGACCTT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAAGGTCACACTGGTATaGGAGAAGGCTGAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKKVTLV*EKAEVL
Trigger: AAGAACTTCAGCCTTCTCCAATACCAGTGTGACCTT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGAGTTCCTTGTCCTATaGCTTCCTTATACTTCACCG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKEFLVL*LPYTSP
Trigger: CGGTGAAGTATAAGGAAGCAATAGGACAAGGAACTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGTTCCCAAGTTTTCTTaGTACATAACCGAGCTAATG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPVPKFS*YITELM
Trigger: CATTAGCTCGGTTATGTACAAAGAAAACTTGGGAAC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTCCCCAGGTTCTCTTaGTATAACACCGAGCTAATG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFPRFS*YNTELM
Trigger: CATTAGCTCGGTGTTATACAAAGAGAACCTGGGGAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGTGTGAAGCAACCCTaGTGTTTCTCAAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGVKQP*CFSKSS
Trigger: TGAAGACTTTGAGAAACACAAGGGTTGCTTCACACC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGTGTGAAGCAACCCTaGTGTTTCTCAAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGVKQP*CFSKSS
Trigger: TGAAGACTTTGAGAAACACAAGGGTTGCTTCACACC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGAGCTCTGTGGTTTTaGCATGTTTGTAAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGALWF*HVCKLL
Trigger: CAACAGCTTACAAACATGCAAAAACCACAGAGCTCC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGACAAGTGTGATGCTTaGAAATGCCTAAATAGCTTC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPDKCDA*KCLNSF
Trigger: GAAGCTATTTAGGCATTTCAAAGCATCACACTTGTC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAGTCTTCTTTGTATTTTaGCTTGCTCACTTGATTGGT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKVFFVF*LAHLIG
Trigger: ACCAATCAAGTGAGCAAGCAAAAATACAAAGAAGAC...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCTTTGTATTTTACCTaGCTAGCTGCCACACCAGCT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESLYFT*LAATPA
Trigger: AGCTGGTGTGGCAGCTAGCAAGGTAAAATACAAAGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTTTCCTTGTATAGTTaGTCACTTAGGGCATCTCCT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFSLYS*SLRASP
Trigger: AGGAGATGCCCTAAGTGACAAACTATACAAGGAAAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAGGAGAGTCTGTAACTaGGGTGAATTTTGTCTTATC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRRVCN*GEFCLI
Trigger: GATAAGACAAAATTCACCCAAGTTACAGACTCTCCT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATCTCACCTTCATGTTTaGCTTTGTAATTCAGATCAC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKSHLHV*LCNSDH
Trigger: GTGATCTGAATTACAAAGCAAAACATGAAGGTGAGA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGCTGGTATATGGCACTaGAACTTCTCACCTTCATGT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEAGIWH*NFSPSC
Trigger: ACATGAAGGTGAGAAGTTCAAGTGCCATATACCAGC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGTCTGAAGCTCGCTTaGCCTTTTCCATTTCTAAGG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECLKLA*PFPFLR
Trigger: CCTTAGAAATGGAAAAGGCAAAGCGAGCTTCAGACA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACAGTTTAGGGTCATCTaGAAGACTTTGGAAGCCAAC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKQFRVI*KTLEAN
Trigger: GTTGGCTTCCAAAGTCTTCAAGATGACCCTAAACTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGAGGGTGTCTGGATGTaGCCTGTACTTCTTTTCATT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKEGVWM*PVLLFI
Trigger: AATGAAAAGAAGTACAGGCAACATCCAGACACCCTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATATTCCTTGAACTTTTaGCAGCAACAATTGGGATGG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPYSLNF*QQQLGW
Trigger: CCATCCCAATTGTTGCTGCAAAAAGTTCAAGGAATA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTCAGTTTGTTACTCTaGTTAAGTGCCTGTTCCATT +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKFSLLL*LSACSI
Trigger: AATGGAACAGGCACTTAACAAGAGTAACAAACTGAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTGTCCATGTTCAGTTaGTTACTCTTGTTAAGTGCC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPLSMFS*LLLLSA
Trigger: GGCACTTAACAAGAGTAACAAACTGAACATGGACAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATGGAATGGACTAATTaGGGATCATCCTCGAGACTG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKMEWTN*GSSSRL
Trigger: CAGTCTCGAGGATGATCCCAAATTAGTCCATTCCAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCAGCTCAATGTTCATaGCATCTGGAAGGAGGATGT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSAQCS*HLEGGC
Trigger: ACATCCTCCTTCCAGATGCAATGAACATTGAGCTGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCAGCTCAATGTTCATaGCATCTGGAAGGAGGATGT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESAQCS*HLEGGC
Trigger: ACATCCTCCTTCCAGATGCAATGAACATTGAGCTGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATGGTGTATAAATGCTaGTTCATGGTATGTGCATTC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKMVYKC*FMVCAF
Trigger: GAATGCACATACCATGAACAAGCATTTATACACCAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATAAACTTTCTTAGCTaGCACAACATCGTTCTGATC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKINFLS*HNIVLI
Trigger: GATCAGAACGATGTTGTGCAAGCTAAGAAAGTTTAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGAGGCTTTTGCTGCTTaGATTGGTATGGCATCAACA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKEAFAA*IGMAST
Trigger: TGTTGATGCCATACCAATCAAAGCAGCAAAAGCCTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTGCGAAAGCCTTCCTaGTACTTGTATTCACTGGCA +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTELRKPS*YLYSLA
Trigger: TGCCAGTGAATACAAGTACAAGGAAGGCTTTCGCAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACACTGGAGATCAGACTaGTACATATTATCGCTCTGG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKHWRSD*YILSLW
Trigger: CCAGAGCGATAATATGTACAAGTCTGATCTCCAGTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCTGTGTATAAGCGCTaGTTCATATTGAGAGCATTG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSVYKR*FILRAL
Trigger: CAATGCTCTCAATATGAACAAGCGCTTATACACAGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATATCTCTTGAAGCCTaGGCTGCTTGGATTGGAATG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEISLEA*AAWIGM
Trigger: CATTCCAATCCAAGCAGCCAAGGCTTCAAGAGATAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACATAGTCCTTCATCTTaGATTCATCCCATCCCTTGG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEHSPSS*IHPIPW
Trigger: CCAAGGGATGGGATGAATCAAAGATGAAGGACTATG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTGGATAATGTCGTTTaGATCCGGCATGCATGTCCA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLDNVV*IRHACP
Trigger: TGGACATGCATGCCGGATCAAAACGACATTATCCAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCCACAGGCGTAAAGTaGAGAGTTTCTATTTTTGTG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSTGVK*RVSIFV
Trigger: CACAAAAATAGAAACTCTCAACTTTACGCCTGTGGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAAGGATGACACATCCATaGGTGCAAGTAATTACGATA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPRMTHP*VQVITI
Trigger: TATCGTAATTACTTGCACCAATGGATGTGTCATCCT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGTTTTCCCATGTCTTaGGAGTGGGAGATATGTGGT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESFPMS*EWEICG
Trigger: ACCACATATCTCCCACTCCAAAGACATGGGAAAACT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGTTTTCCCATGTCTTaGGAGTGGGAGATATGTGGT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSFPMS*EWEICG
Trigger: ACCACATATCTCCCACTCCAAAGACATGGGAAAACT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATGCCTTTCAGCCAGTaGAGGTCATCCTTGTATACA +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEMPFSQ*RSSLYT
Trigger: TGTATACAAGGATGACCTCAACTGGCTGAAAGGCAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATGCCTTTCAGCCAGTaGAGGTCATCCTTGTATACA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKMPFSQ*RSSLYT
Trigger: TGTATACAAGGATGACCTCAACTGGCTGAAAGGCAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGCTTGTAGTCATTCCTaGTTTTCAACATGTGAGCTT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPACSHS*FSTCEL
Trigger: AAGCTCACATGTTGAAAACAAGGAATGACTACAAGC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAACAAATGGAACATCTTaGGGGCCAAGTGTATACCCA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKTNGTS*GPSVYP
Trigger: TGGGTATACACTTGGCCCCAAAGATGTTCCATTTGT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATCTTGTCTTTCAGTTaGTGGTACAATTCCCGATAC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPILSFS*WYNSRY
Trigger: GTATCGGGAATTGTACCACAAACTGAAAGACAAGAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGTCTCGCATCTTCCTaGCCTTATCAGTGTATAGGT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKCLASS*PYQCIG
Trigger: ACCTATACACTGATAAGGCAAGGAAGATGCGAGACA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATGTCTCGCATCTTCCTaGCCTTATCAGTGTATAGGT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTECLASS*PYQCIG
Trigger: ACCTATACACTGATAAGGCAAGGAAGATGCGAGACA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTGTCAAGCACCACTTaGTATTTGTCTCGCATCTTC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVSSTT*YLSRIF
Trigger: GAAGATGCGAGACAAATACAAAGTGGTGCTTGACAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGAACCGGAGTGTACTaGTCTTTCATCTTTTCATAT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGTGVY*SFIFSY
Trigger: ATATGAAAAGATGAAAGACAAGTACACTCCGGTTCC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAAATATCGCTGATTTGTTaGTTGACTTTTGTAGTACGC +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKISLIC*LTFVVR
Trigger: GCGTACTACAAAAGTCAACAAACAAATCAGCGATAT...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAACTTCATCTTTAACCTaGCGGACATGCAGCAACATG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKTSSLT*RTCSNM
Trigger: CATGTTGCTGCATGTCCGCAAGGTTAAAGATGAAGT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAACTTCATCTTTAACCTaGCGGACATGCAGCAACATG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTETSSLT*RTCSNM
Trigger: CATGTTGCTGCATGTCCGCAAGGTTAAAGATGAAGT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTCCAGTGGGCTTTGTaGGCTTCGTACTGTTTCTTA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFQWAL*ASYCFL
Trigger: TAAGAAACAGTACGAAGCCAACAAAGCCCACTGGAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTCCAGTGGGCTTTGTaGGCTTCGTACTGTTTCTTA +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEFQWAL*ASYCFL
Trigger: TAAGAAACAGTACGAAGCCAACAAAGCCCACTGGAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACAGGTTCCTCTTTCCTaGACATGTTTCTCTTTGTAT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPQVPLS*TCFSLY
Trigger: ATACAAAGAGAAACATGTCAAGGAAAGAGGAACCTG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTCTTGACATGGTCCTaGTACTTGTTCTCAGACACC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEFLTWS*YLFSDT
Trigger: GGTGTCTGAGAACAAGTACAAGGACCATGTCAAGAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAACATCACTTTGCTTCTaGGCCACTTCCATAGCATGT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKTSLCF*ATSIAC
Trigger: ACATGCTATGGAAGTGGCCAAGAAGCAAAGTGATGT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTAAGAACTGGCAAGTaGGCTTGTATTCAGGACATG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVRTGK*ACIQDM
Trigger: CATGTCCTGAATACAAGCCAACTTGCCAGTTCTTAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTTGAGTGGCATTCTTaGCTCTTAGCATGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEFEWHS*LLACQV
Trigger: CACCTGACATGCTAAGAGCAAAGAATGCCACTCAAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTCTCAGCATCTTCCTaGTACTTTTTCTGGCTTGAA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFSASS*YFFWLE
Trigger: TTCAAGCCAGAAAAAGTACAAGGAAGATGCTGAGAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAAACCATAGGCAGCTTGAGAACTTAGGTAACAGTGGAGAGTCTAAACCGAAATTGCTCAAGTTCTCTTaGTACAATATCGAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: KNHRQLENLGNSGESKPKLLKFS*YNIELK
Trigger: CTTTAGCTCGATATTGTACAAAGAGAACTTGAGCAA...TTTCGGTTTAGACTCTCCACTGTTACCTAAGTTCTCAAGCTGCCTATGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397345.8
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTCCCCAGGTTTTCTTaGTATAGCACCGAACTAAAG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVPRFS*YSTELK
Trigger: CTTTAGTTCGGTGCTATACAAAGAAAACCTGGGGAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397345.8
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAATGTGGTCCTGTGTTaGTTTCACTCTCATCATCTC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTENVVLC*FHSHHL
Trigger: GAGATGATGAGAGTGAAACAAACACAGGACCACATT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATTTCTCATGTTCTCTTaGTACAATACCGAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPFLMFS*YNTELK
Trigger: CTTTAGCTCGGTATTGTACAAAGAGAACATGAGAAA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCTTCCCGAACACCATaGGCTTATACAGACTTTTTC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESSRTP*AYTDFF
Trigger: GAAAAAGTCTGTATAAGCCAATGGTGTTCGGGAAGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCACATGTTCAATATCCTTaGCTTTTTCATCTACGTGAC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPHVQYP*LFHLRD
Trigger: GTCACGTAGATGAAAAAGCAAAGGATATTGAACATG...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGCTGCGACACTTTCTTaGCATGTTCAATATCCTTTG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKAATLS*HVQYPL
Trigger: CAAAGGATATTGAACATGCAAAGAAAGTGTCGCAGC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAGGTGTCTCACTCCATTaGCCTTTGATTTTATTTTCA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPGVSLH*PLILFS
Trigger: TGAAAATAAAATCAAAGGCAAATGGAGTGAGACACC...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACATTCATTCTGGCATTaGCAACTTCAAAGCAAGGTG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEHSFWH*QLQSKV
Trigger: CACCTTGCTTTGAAGTTGCAAATGCCAGAATGAATG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAGTCACTCAGTTGTTaGGAATTGACTTGGGCTTGT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEKSLSC*ELTWAC
Trigger: ACAAGCCCAAGTCAATTCCAAACAACTGAGTGACTT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACAGCTGAGTATCAAGTaGATATTTTGGGGTCTCACA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKQLSIK*IFWGLT
Trigger: TGTGAGACCCCAAAATATCAACTTGATACTCAGCTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACTGAGATTTCTTAGCTaGAGTGACTTGGAGCATATC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLRFLS*SDLEHI
Trigger: GATATGCTCCAAGTCACTCAAGCTAAGAAATCTCAG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCTTCTCCTTTAGCCTaGTATAAGATATCACTGACT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSSPLA*YKISLT
Trigger: AGTCAGTGATATCTTATACAAGGCTAAAGGAGAAGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGCACATTGTTGCCCTaGGCTATTAAGTCATACCAA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSTLLP*AIKSYQ
Trigger: TTGGTATGACTTAATAGCCAAGGGCAACAATGTGCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGCACATTGTTGCCCTaGGCTATTAAGTCATACCAA +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESTLLP*AIKSYQ
Trigger: TTGGTATGACTTAATAGCCAAGGGCAACAATGTGCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAATCACTTAGCTGCTTaGTGTTATGCTGAGCCAACA +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTENHLAA*CYAEPT
Trigger: TGTTGGCTCAGCATAACACAAAGCAGCTAAGTGATT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAATCACTTAGCTGCTTaGTGTTATGCTGAGCCAACA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKNHLAA*CYAEPT
Trigger: TGTTGGCTCAGCATAACACAAAGCAGCTAAGTGATT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATGGTGTATAAATGCTaGTTCATGGTATGTGCATTC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPMVYKC*FMVCAF
Trigger: GAATGCACATACCATGAACAAGCATTTATACACCAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATTTCAGTTGCCCTTTaGCATTTTTCCACATCCAAA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPISVAL*HFSTSK
Trigger: TTTGGATGTGGAAAAATGCAAAAGGGCAACTGAAAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTGATGGCATTATTTTaGGCCAACACTTGTTCCAGA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVMALF*ANTCSR
Trigger: TCTGGAACAAGTGTTGGCCAAAAATAATGCCATCAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397345.8
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATCTGTGTATAAACGCTaGTTCATAGTGATGGCATTA +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPSVYKR*FIVMAL
Trigger: TAATGCCATCACTATGAACAAGCGTTTATACACAGA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397345.8
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTCTCAAAATCTTTCTaGTACTCACGGTCACTCTGC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFSKSF*YSRSLC
Trigger: GCAGAGTGACCGTGAGTACAAGAAAGATTTTGAGAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATATTCTGGGCGTTTTaGACTCTCAACACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKIFWAF*TLNTSG
Trigger: TCCTGAAGTGTTGAGAGTCAAAAACGCCCAGAATAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATATTCTGGGCGTTTTaGACTCTCAACACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEIFWAF*TLNTSG
Trigger: TCCTGAAGTGTTGAGAGTCAAAAACGCCCAGAATAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCATGGGGATATGAACATTaGCTTTGGTATCCTCATAAT +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPWGYEH*LWYPHN
Trigger: ATTATGAGGATACCAAAGCAAATGTTCATATCCCCA...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACAGTTGAGGTCATCCTaGTATACAATATCGCTGATC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEQLRSS*YTISLI
Trigger: GATCAGCGATATTGTATACAAGGATGACCTCAACTG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACAGTTGAGGTCATCCTaGTATACAATATCGCTGATC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKQLRSS*YTISLI
Trigger: GATCAGCGATATTGTATACAAGGATGACCTCAACTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGGAGTTGTATGGATCTaGTCTTTCAGTTTGTGGTAC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEGVVWI*SFSLWY
Trigger: GTACCACAAACTGAAAGACAAGATCCATACAACTCC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGAGTTGTATGGATCTaGTCTTTCAGTTTGTGGTAC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGVVWI*SFSLWY
Trigger: GTACCACAAACTGAAAGACAAGATCCATACAACTCC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGAGTCGGCAACATACTaGAAATCTGACTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEESATY*KSDFVL
Trigger: AAGGACAAAGTCAGATTTCAAGTATGTTGCCGACTC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCGCTGATTTGTTTGTaGACTTTTGTAGTACGCAGG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSLICL*TFVVRR
Trigger: CCTGCGTACTACAAAAGTCAACAAACAAATCAGCGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCGCTGATTTGTTTGTaGACTTTTGTAGTACGCAGG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESLICL*TFVVRR
Trigger: CCTGCGTACTACAAAAGTCAACAAACAAATCAGCGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp ACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACCAATATCGCTGATTTGTTaGTTGACTTTTGTAGTACGC +
Preference number: 5 (lower is better)
Translates to: TQRRKDGTTINHIDTEKPISLIC*LTFVVR
Trigger: GCGTACTACAAAAGTCAACAAACAAATCAGCGATAT...TGGTTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAGAGCTGGCTGTCTTTaGGATTGTATTTTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKRAGCL*DCILVS
Trigger: AGACACCAAAATACAATCCAAAAGACAGCCAGCTCT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTCTTCAGGTCAGCCTaGTATTTAACCTCACTTGCA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFFRSA*YLTSLA
Trigger: TGCAAGTGAGGTTAAATACAAGGCTGACCTGAAGAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAACTGGCAAGTTGGCTaGTATTCAGGACATGATTCA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKNWQVG*YSGHDS
Trigger: TGAATCATGTCCTGAATACAAGCCAACTTGCCAGTT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAGATTCTTGACTTGTaGGGCATGAATGATCTCTGG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEKILDL*GMNDLW
Trigger: CCAGAGATCATTCATGCCCAACAAGTCAAGAATCTT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAAAGATTCTTGACTTGTaGGGCATGAATGATCTCTGG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKKILDL*GMNDLW
Trigger: CCAGAGATCATTCATGCCCAACAAGTCAAGAATCTT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS TCA 90 bp GACACTTTCTTTGCATGTTCAATATCCTTTGCTTTTTCATCTACGTaGCATATAGTCTTAGCAACATCACCATCCATTCGATACTTAACC +
Preference number: 5 (lower is better)
Translates to: DTFFACSISFAFSST*HIVLATSPSIRYLT
Trigger: GGTTAAGTATCGAATGGATGGTGATGTTGCTAAGACTATATGTCACGTAGATGAAAAAGCAAAGGATATTGAACATGCAAAGAAAGTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAGTTCCCAAGTTTTCTTaGTACATAACCGAGCTAATG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEVPKFS*YITELM
Trigger: CATTAGCTCGGTTATGTACAAAGAAAACTTGGGAAC...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGTTCCCAAGTTTTCTTaGTACATAACCGAGCTAATG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKVPKFS*YITELM
Trigger: CATTAGCTCGGTTATGTACAAAGAAAACTTGGGAAC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGACAAGTGTGATGCTTaGAAATGCCTAAATAGCTTC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKDKCDA*KCLNSF
Trigger: GAAGCTATTTAGGCATTTCAAAGCATCACACTTGTC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTTTCCTTGTATAGTTaGTCACTTAGGGCATCTCCT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFSLYS*SLRASP
Trigger: AGGAGATGCCCTAAGTGACAAACTATACAAGGAAAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATATTCCTTGAACTTTTaGCAGCAACAATTGGGATGG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKYSLNF*QQQLGW
Trigger: CCATCCCAATTGTTGCTGCAAAAAGTTCAAGGAATA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTGTCCATGTTCAGTTaGTTACTCTTGTTAAGTGCC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKLSMFS*LLLLSA
Trigger: GGCACTTAACAAGAGTAACAAACTGAACATGGACAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCTGTGTATAAATGCTaGCTCATTGTCAGGGCATTA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSVYKC*LIVRAL
Trigger: TAATGCCCTGACAATGAGCAAGCATTTATACACAGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATTGAAGTTTTATCCTaGTCCCAAACCTCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKIEVLS*SQTSLY
Trigger: GTACAGAGAGGTTTGGGACAAGGATAAAACTTCAAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATTGAAGTTTTATCCTaGTCCCAAACCTCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEIEVLS*SQTSLY
Trigger: GTACAGAGAGGTTTGGGACAAGGATAAAACTTCAAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAGGATGACACATCCATaGGTGCAAGTAATTACGATA +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTERMTHP*VQVITI
Trigger: TATCGTAATTACTTGCACCAATGGATGTGTCATCCT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACATCGTCAACACTTCTaGGTAACGTATAAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEHRQHF*VTYKEL
Trigger: AAGCTCTTTATACGTTACCAAGAAGTGTTGACGATG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACATCGTCAACACTTCTaGGTAACGTATAAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKHRQHF*VTYKEL
Trigger: AAGCTCTTTATACGTTACCAAGAAGTGTTGACGATG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGCTTGTAGTCATTCCTaGTTTTCAACATGTGAGCTT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKACSHS*FSTCEL
Trigger: AAGCTCACATGTTGAAAACAAGGAATGACTACAAGC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAACAGGTTCCTCTTTCCTaGACATGTTTCTCTTTGTAT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEQVPLS*TCFSLY
Trigger: ATACAAAGAGAAACATGTCAAGGAAAGAGGAACCTG...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAACAGGTTCCTCTTTCCTaGACATGTTTCTCTTTGTAT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKQVPLS*TCFSLY
Trigger: ATACAAAGAGAAACATGTCAAGGAAAGAGGAACCTG...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS TCA 90 bp CTTGAAATGCCTATTGATCGGAGAGTCGGCAACATACTTGAAATCTaGCTTTGTCCTTTCAAATACTTCTTTATACTTATACTTGCTGTA +
Preference number: 5 (lower is better)
Translates to: LEMPIDRRVGNILEI*LCPFKYFFILILAV
Trigger: TACAGCAAGTATAAGTATAAAGAAGTATTTGAAAGGACAAAGTCAGATTTCAAGTATGTTGCCGACTCTCCGATCAATAGGCATTTCAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000420924.1
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATATTTCTGGCGTGTCTaGAACAACTGTAATTTTTCC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEYFWRV*NNCNFS
Trigger: GGAAAAATTACAGTTGTTCAAGACACGCCAGAAATA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTTCTCATGTTCTCTTaGTACAATACCGAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFLMFS*YNTELK
Trigger: CTTTAGCTCGGTATTGTACAAAGAGAACATGAGAAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAGGTGTCTCACTCCATTaGCCTTTGATTTTATTTTCA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKGVSLH*PLILFS
Trigger: TGAAAATAAAATCAAAGGCAAATGGAGTGAGACACC...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCTCACCTTCATGTTTaGCTTTGTAATTCAGATCAC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSHLHV*LCNSDH
Trigger: GTGATCTGAATTACAAAGCAAAACATGAAGGTGAGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCTCACCTTCATGTTTaGCTTTGTAATTCAGATCAC +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESHLHV*LCNSDH
Trigger: GTGATCTGAATTACAAAGCAAAACATGAAGGTGAGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATCTTCTCCTTTAGCCTaGTATAAGATATCACTGACT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTESSPLA*YKISLT
Trigger: AGTCAGTGATATCTTATACAAGGCTAAAGGAGAAGA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATTCAGTTTGTTACTCTaGTTAAGTGCCTGTTCCATT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKFSLLL*LSACSI
Trigger: AATGGAACAGGCACTTAACAAGAGTAACAAACTGAA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAATTCAGTTTGTTACTCTaGTTAAGTGCCTGTTCCATT +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEFSLLL*LSACSI
Trigger: AATGGAACAGGCACTTAACAAGAGTAACAAACTGAA...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATGGTGTATAAATGCTaGTTCATGGTATGTGCATTC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKMVYKC*FMVCAF
Trigger: GAATGCACATACCATGAACAAGCATTTATACACCAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATAAACTTTCTTAGCTaGCACAACATCGTTCTGATC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKINFLS*HNIVLI
Trigger: GATCAGAACGATGTTGTGCAAGCTAAGAAAGTTTAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATTTCAGTTGCCCTTTaGCATTTTTCCACATCCAAA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKISVAL*HFSTSK
Trigger: TTTGGATGTGGAAAAATGCAAAAGGGCAACTGAAAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATCTGTGTATAAACGCTaGTTCATAGTGATGGCATTA +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKSVYKR*FIVMAL
Trigger: TAATGCCATCACTATGAACAAGCGTTTATACACAGA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397345.8
ENST00000427231.7
CDS-3UTR CAA 90 bp TTTAAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAATAAATGCTTGCTCATaGTCAGGGCATTATTCTTTG +
Preference number: 5 (lower is better)
Translates to: FKTQRRKDGTTINHIDTEINACS*SGHYSL
Trigger: CAAAGAATAATGCCCTGACAATGAGCAAGCATTTAT...TTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAATGGGGATATGAACATTaGCTTTGGTATCCTCATAAT +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKWGYEH*LWYPHN
Trigger: ATTATGAGGATACCAAAGCAAATGTTCATATCCCCA...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS-3UTR CAA 90 bp AAAACCCAAAGGAGAAAGGATGGTACTACCATAAATCACATTGACACAGAAAAAATATCGCTGATTTGTTaGTTGACTTTTGTAGTACGC +
Preference number: 5 (lower is better)
Translates to: KTQRRKDGTTINHIDTEKISLIC*LTFVVR
Trigger: GCGTACTACAAAAGTCAACAAACAAATCAGCGATAT...TTTTTCTGTGTCAATGTGATTTATGGTAGTACCATCCTTTCTCCTTTGGGTTTT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 72 bp ACAATAGCCCAGCTCCCAGCCCGCAGCCATCACCAATaGCTAGCCATGGGAGTGAGCCACCTGGATGTCCTG +
Preference number: 6 (lower is better)
Translates to: TIAQLPARSHHQ*LAMGVSHLDVL
Trigger: CAGGACATCCAGGTGGCTCACTCCCATGGCTAGCCATTGGTGATGGCTGCGGGCTGGGAGCTGGGCTATTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480784.1
CDS CAA 90 bp TCACCAATGGCTAGCCATGGGAGTGAGCCACCTGGATGTCCTGGCTaGACTGAGCCCCAGGTGTCTGCCAGCAACATGGGGAGCAGGACT +
Preference number: 6 (lower is better)
Translates to: SPMASHGSEPPGCPG*TEPQVSASNMGSRT
Trigger: AGTCCTGCTCCCCATGTTGCTGGCAGACACCTGGGGCTCAGTCAAGCCAGGACATCCAGGTGGCTCACTCCCATGGCTAGCCATTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480784.1
CDS TCA 72 bp CGTCACTCGCCGCCTGCCTGGCAGCTTTGGCAGCTCTaGTGGGAATCGCATCAGTTCTCAGGTCATATCCCT +
Preference number: 6 (lower is better)
Translates to: RHSPPAWQLWQL*WESHQFSGHIP
Trigger: AGGGATATGACCTGAGAACTGATGCGATTCCCATCAGAGCTGCCAAAGCTGCCAGGCAGGCGGCGAGTGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS TCA 72 bp GACACCAGGTTGCTGACAGTCTTCGCCAGCAGGATCTaGGGCGTGTCAGGTACGGCATGGCAGGTTCCTCTT +
Preference number: 6 (lower is better)
Translates to: DTRLLTVFASRI*GVSGTAWQVPL
Trigger: AAGAGGAACCTGCCATGCCGTACCTGACACGCCTCAGATCCTGCTGGCGAAGACTGTCAGCAACCTGGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS TCA 72 bp GCCGGTACTCTCGTTCATTCTGGAGCTTGTCAGCTATaGGGGCCCAGCGGATCTTGTTGTCATCCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: AGTLVHSGACQL*GPSGSCCHPWL
Trigger: CAGCCAGGGATGACAACAAGATCCGCTGGGCCCTCATAGCTGACAAGCTCCAGAATGAACGAGAGTACCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS GCA 72 bp CCTTCTTGGCCATTTCTATGTCTGGGCGACCGAGCATaGTTAAGCCATGGCTGCCTTCCTTGCGGTGCTTGG +
Preference number: 6 (lower is better)
Translates to: PSWPFLCLGDRA*LSHGCLPCGAW
Trigger: CCAAGCACCGCAAGGAAGGCAGCCATGGCTTAAGCATGCTCGGTCGCCCAGACATAGAAATGGCCAAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS CCA 72 bp CATTTGGCCCAGTCCAGCCGGTACTCTCGTTCATTCTaGAGCTTGTCAGCTATGAGGGCCCAGCGGATCTTG +
Preference number: 6 (lower is better)
Translates to: HLAQSSRYSRSF*SLSAMRAQRIL
Trigger: CAAGATCCGCTGGGCCCTCATAGCTGACAAGCTCCAGAATGAACGAGAGTACCGGCTGGACTGGGCCAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 72 bp GCATGTCCACAGGGCTCTGGATCTTGGCCTTCCATTTaGCCCAGTCCAGCCGGTACTCTCGTTCATTCTGGA +
Preference number: 6 (lower is better)
Translates to: ACPQGSGSWPSI*PSPAGTLVHSG
Trigger: TCCAGAATGAACGAGAGTACCGGCTGGACTGGGCCAAATGGAAGGCCAAGATCCAGAGCCCTGTGGACATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 72 bp GCCCAGTCCAGCCGGTACTCTCGTTCATTCTGGAGCTaGTCAGCTATGAGGGCCCAGCGGATCTTGTTGTCA +
Preference number: 6 (lower is better)
Translates to: AQSSRYSRSFWS*SAMRAQRILLS
Trigger: TGACAACAAGATCCGCTGGGCCCTCATAGCTGACAAGCTCCAGAATGAACGAGAGTACCGGCTGGACTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 72 bp TGCAGGATGGAAAGCATGTCCACAGGGCTCTGGATCTaGGCCTTCCATTTGGCCCAGTCCAGCCGGTACTCT +
Preference number: 6 (lower is better)
Translates to: CRMESMSTGLWI*AFHLAQSSRYS
Trigger: AGAGTACCGGCTGGACTGGGCCAAATGGAAGGCCAAGATCCAGAGCCCTGTGGACATGCTTTCCATCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 90 bp TTCCATTTGGCCCAGTCCAGCCGGTACTCTCGTTCATTCTGGAGCTaGTCAGCTATGAGGGCCCAGCGGATCTTGTTGTCATCCCTGGCT +
Preference number: 6 (lower is better)
Translates to: FHLAQSSRYSRSFWS*SAMRAQRILLSSLA
Trigger: AGCCAGGGATGACAACAAGATCCGCTGGGCCCTCATAGCTGACAAGCTCCAGAATGAACGAGAGTACCGGCTGGACTGGGCCAAATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 90 bp TCCCGGTCCAGCTTATATTCAAAATCGCTTTGCTGCAGGGATGACTaGGCAGCCTGGAGGAAGTCCGGTCGGTCAGGAGTCCACTTCCAG +
Preference number: 6 (lower is better)
Translates to: SRSSLYSKSLCCRDD*AAWRKSGRSGVHFQ
Trigger: CTGGAAGTGGACTCCTGACCGACCGGACTTCCTCCAGGCTGCCAAGTCATCCCTGCAGCAAAGCGATTTTGAATATAAGCTGGACCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS TCA 72 bp GTGCTTCTGAATGCTCAGACTTCTCCTCACCCCCACTaGTGCTTAGTGCACTGGCAGATCGTGACTGCTCCC +
Preference number: 6 (lower is better)
Translates to: VLLNAQTSPHPH*CLVHWQIVTAP
Trigger: GGGAGCAGTCACGATCTGCCAGTGCACTAAGCATCAGTGGGGGTGAGGAGAAGTCTGAGCATTCAGAAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS GCA 72 bp GTAGTTAGTGTTGGTGATGTTGGCTTGGGCATCCTTTaGAGCCGTGACACTGAGCATGTCGGCAGGGGTGTG +
Preference number: 6 (lower is better)
Translates to: VVSVGDVGLGIL*SRDTEHVGRGV
Trigger: CACACCCCTGCCGACATGCTCAGTGTCACGGCTGCAAAGGATGCCCAAGCCAACATCACCAACACTAACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS GCA 72 bp GATGCTTCTGGTTCTTGGCGTGTGTCAGGGACAAGGTaGTGGAAGGCAGGATGTAGCTGGTGGCTTTCACTC +
Preference number: 6 (lower is better)
Translates to: DASGSWRVSGTR*WKAGCSWWLSL
Trigger: GAGTGAAAGCCACCAGCTACATCCTGCCTTCCAGCACCTTGTCCCTGACACACGCCAAGAACCAGAAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 72 bp TCAGGGACAAGGTGCTGGAAGGCAGGATGTAGCTGGTaGCTTTCACTCTATCCCAGGCCTCCTTGTACAGGT +
Preference number: 6 (lower is better)
Translates to: SGTRCWKAGCSW*LSLYPRPPCTG
Trigger: ACCTGTACAAGGAGGCCTGGGATAGAGTGAAAGCCACCAGCTACATCCTGCCTTCCAGCACCTTGTCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 72 bp GTGTCAGGGACAAGGTGCTGGAAGGCAGGATGTAGCTaGTGGCTTTCACTCTATCCCAGGCCTCCTTGTACA +
Preference number: 6 (lower is better)
Translates to: VSGTRCWKAGCS*WLSLYPRPPCT
Trigger: TGTACAAGGAGGCCTGGGATAGAGTGAAAGCCACCAGCTACATCCTGCCTTCCAGCACCTTGTCCCTGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 72 bp GGCCTGTTTGGCTGCCTGTGTGGCCTTCTTGATGTCTaGTCGATCAGCCACTGTGGTGTAATGCAGGTTCTC +
Preference number: 6 (lower is better)
Translates to: GLFGCLCGLLDV*SISHCGVMQVL
Trigger: GAGAACCTGCATTACACCACAGTGGCTGATCGACCAGACATCAAGAAGGCCACACAGGCAGCCAAACAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS CCA 72 bp ATTTCTATGTCTGGGCGACCGAGCATGCTTAAGCCATaGCTGCCTTCCTTGCGGTGCTTGGCTCTGTACTCC +
Preference number: 6 (lower is better)
Translates to: ISMSGRPSMLKP*LPSLRCLALYS
Trigger: GGAGTACAGAGCCAAGCACCGCAAGGAAGGCAGCCATGGCTTAAGCATGCTCGGTCGCCCAGACATAGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS CAA 72 bp CTCTGCACTTTGGCAATGTGGAGGGACCACATTATCTaGGGGTCATCGTGTACTGCTCGGGCGCCAATGTGG +
Preference number: 6 (lower is better)
Translates to: LCTLAMWRDHII*GSSCTARAPMW
Trigger: CCACATTGGCGCCCGAGCAGTACACGATGACCCCAAGATAATGTGGTCCCTCCACATTGCCAAAGTGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS TCA 72 bp GTCGCTGTAAGTCGAAAGGTGGTGGTCTGGTGCTTCTaGATGCTCAGACTTCTCCTCACCCCCACTGATGCT +
Preference number: 6 (lower is better)
Translates to: VAVSRKVVVWCF*MLRLLLTPTDA
Trigger: AGCATCAGTGGGGGTGAGGAGAAGTCTGAGCATTCAGAAGCACCAGACCACCACCTTTCGACTTACAGCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS TCA 72 bp GTCCAGCTTATATTCAAAATCGCTTTGCTGCAGGGATaGCTTGGCAGCCTGGAGGAAGTCCGGTCGGTCAGG +
Preference number: 6 (lower is better)
Translates to: VQLIFKIALLQG*LGSLEEVRSVR
Trigger: CCTGACCGACCGGACTTCCTCCAGGCTGCCAAGTCATCCCTGCAGCAAAGCGATTTTGAATATAAGCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS TCA 72 bp CATGGTCCTTGTACTTGTTCTCAGACACCAGGTTGCTaGCAGTCTTCGCCAGCAGGATCTGAGGCGTGTCAG +
Preference number: 6 (lower is better)
Translates to: HGPCTCSQTPGC*QSSPAGSEACQ
Trigger: CTGACACGCCTCAGATCCTGCTGGCGAAGACTGTCAGCAACCTGGTGTCTGAGAACAAGTACAAGGACCATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS TCA 72 bp ACAGGGTCAGCAGGCGATTGCATGAATGTGGAGGTCTaGGAAGCACTGCTGTTTTCCCCCGATCTTGGCATG +
Preference number: 6 (lower is better)
Translates to: TGSAGDCMNVEV*EALLFSPDLGM
Trigger: CATGCCAAGATCGGGGGAAAACAGCAGTGCTTCTCAGACCTCCACATTCATGCAATCGCCTGCTGACCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489048.1
CDS GCA 72 bp TCACTGACTGTGTCAGTGACTGCTCGGTGGTGGAAATaGTCTGGACGATCAGGAATGGACCTCCAGATACCC +
Preference number: 6 (lower is better)
Translates to: SLTVSVTARWWK*SGRSGMDLQIP
Trigger: GGGTATCTGGAGGTCCATTCCTGATCGTCCAGAGCATTTCCACCACCGAGCAGTCACTGACACAGTCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000420924.1
ENST00000427231.7
CDS CCA 72 bp ATGAAGGGCCCGGTCCAGATCCACGGTTTTGGTAGTTaGAGCCACTTTGCCTCTGACACTGTGCACATAGTC +
Preference number: 6 (lower is better)
Translates to: MKGPVQIHGFGS*SHFASDTVHIV
Trigger: GACTATGTGCACAGTGTCAGAGGCAAAGTGGCTCCAACTACCAAAACCGTGGATCTGGACCGGGCCCTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 72 bp GACTGTGTCAGTGACTGCTCGGTGGTGGAAATGCTCTaGACGATCAGGAATGGACCTCCAGATACCCAACTG +
Preference number: 6 (lower is better)
Translates to: DCVSDCSVVEML*TIRNGPPDTQL
Trigger: CAGTTGGGTATCTGGAGGTCCATTCCTGATCGTCCAGAGCATTTCCACCACCGAGCAGTCACTGACACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000420924.1
ENST00000427231.7
CDS CAA 72 bp CGATATTTGATATGGCTGGCCAGATGCTTCTGGTTCTaGGCGTGTGTCAGGGACAAGGTGCTGGAAGGCAGG +
Preference number: 6 (lower is better)
Translates to: RYLIWLARCFWF*ACVRDKVLEGR
Trigger: CCTGCCTTCCAGCACCTTGTCCCTGACACACGCCAAGAACCAGAAGCATCTGGCCAGCCATATCAAATATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 72 bp ACTGGTGATGTCTCCCACATAGCGGCAATGGATCACTaGGGGTGTGTATGGCAGAGAGATCATGTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: TGDVSHIAAMDH*GCVWQRDHVAL
Trigger: CAGGGCCACATGATCTCTCTGCCATACACACCCCAAGTGATCCATTGCCGCTATGTGGGAGACATCACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS TCA 72 bp CCAGGGAGCCCAGAGGGAGCCATCCAATGCCCTTCATaGAGTCAGCATAGTCAGCCTTGTACTGATTATCAC +
Preference number: 6 (lower is better)
Translates to: PGSPEGAIQCPS*SQHSQPCTDYH
Trigger: GTGATAATCAGTACAAGGCTGACTATGCTGACTTCATGAAGGGCATTGGATGGCTCCCTCTGGGCTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 72 bp AGTTTCTTGCTGAACATGGCGGTGTTCTTAACGGCCTaGACAAGTTCAGGGGCATCAGGAGGAAGCAGGTAC +
Preference number: 6 (lower is better)
Translates to: SFLLNMAVFLTA*TSSGASGGSRY
Trigger: GTACCTGCTTCCTCCTGATGCCCCTGAACTTGTCCAGGCCGTTAAGAACACCGCCATGTTCAGCAAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 72 bp AGTGAGACACATGACCAATTTTGGAACAGGCTAATCTaGGGACCAGAAGGGCCCGCCAGTGGAAGAGAAAGG +
Preference number: 6 (lower is better)
Translates to: SETHDQFWNRLI*GPEGPASGRER
Trigger: CCTTTCTCTTCCACTGGCGGGCCCTTCTGGTCCCCAGATTAGCCTGTTCCAAAATTGGTCATGTGTCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497809.1
CDS CAA 72 bp CCTTGCGGACATGCAGCAACATGGGTGTGTCGTGGATaGTGGTGTAGCCTCTGGGTTTGGCCTTGTTGTATT +
Preference number: 6 (lower is better)
Translates to: PCGHAATWVCRG*WCSLWVWPCCI
Trigger: AATACAACAAGGCCAAACCCAGAGGCTACACCACAATCCACGACACACCCATGTTGCTGCATGTCCGCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000480784.1
CDS CAA 72 bp AGCTTATATTCAAAATCGCTTTGCTGCAGGGATGACTaGGCAGCCTGGAGGAAGTCCGGTCGGTCAGGAGTC +
Preference number: 6 (lower is better)
Translates to: SLYSKSLCCRDD*AAWRKSGRSGV
Trigger: GACTCCTGACCGACCGGACTTCCTCCAGGCTGCCAAGTCATCCCTGCAGCAAAGCGATTTTGAATATAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 90 bp AATATCGCTGATCTGATCTGTGACTTTCCTGACGTGATCATTGACTaGCAAGTCGGGGTGGCAAATCCATTCGTGGAGGCGCAGGCGGTA +
Preference number: 6 (lower is better)
Translates to: NIADLICDFPDVIID*QVGVANPFVEAQAV
Trigger: TACCGCCTGCGCCTCCACGAATGGATTTGCCACCCCGACTTGCAAGTCAATGATCACGTCAGGAAAGTCACAGATCAGATCAGCGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 90 bp CGGGTCTCTGGTAGTGTTGTGTATGAGCCCTGTGCCAAGTGCTTCTaGACATGGTCCTTGTACTTGTTCTCAGACACCAGGTTGCTGACA +
Preference number: 6 (lower is better)
Translates to: RVSGSVVYEPCAKCF*TWSLYLFSDTRLLT
Trigger: TGTCAGCAACCTGGTGTCTGAGAACAAGTACAAGGACCATGTCAAGAAGCACTTGGCACAGGGCTCATACACAACACTACCAGAGACCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS TCA 72 bp ACTGACAAGGGTCTGCCCCTGCTTGGCGGCCAAGACTaGCACCATATCAGCAGGTATATTGATTTTGGCCTT +
Preference number: 6 (lower is better)
Translates to: TDKGLPLLGGQD*HHISRYIDFGL
Trigger: AAGGCCAAAATCAATATACCTGCTGATATGGTGTCAGTCTTGGCCGCCAAGCAGGGGCAGACCCTTGTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS TCA 72 bp TCTGAGAAGCACTGCTGTTTTCCCCCGATCTTGGCATaGCTGGACCACGCCTGTCTTAGACTTTCTTTGACC +
Preference number: 6 (lower is better)
Translates to: SEKHCCFPPILA*LDHACLRLSLT
Trigger: GGTCAAAGAAAGTCTAAGACAGGCGTGGTCCAGTCATGCCAAGATCGGGGGAAAACAGCAGTGCTTCTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489048.1
CDS TCA 72 bp GAATCTGCACTTCAACAGGGTCAGCAGGCGATTGCATaGATGTGGAGGTCTGAGAAGCACTGCTGTTTTCCC +
Preference number: 6 (lower is better)
Translates to: ESALQQGQQAIA*MWRSEKHCCFP
Trigger: GGGAAAACAGCAGTGCTTCTCAGACCTCCACATTCATGCAATCGCCTGCTGACCCTGTTGAAGTGCAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489048.1
CDS GCA 72 bp GTAGTTGGCGTTGGTGGCAACCTCCTGAGATTTCTTTaGAGCTGTCACACTGACCATATCCAGAGGTGTGTG +
Preference number: 6 (lower is better)
Translates to: VVGVGGNLLRFL*SCHTDHIQRCV
Trigger: CACACACCTCTGGATATGGTCAGTGTGACAGCTGCAAAGAAATCTCAGGAGGTTGCCACCAACGCCAACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS GCA 72 bp ATTTTCTCGGTATTTAACCTGGCTGCTCAGCTTGGCTaGCTTCTTGGCCATTTCTATGTCTGGGCGACCGAG +
Preference number: 6 (lower is better)
Translates to: IFSVFNLAAQLG*LLGHFYVWATE
Trigger: CTCGGTCGCCCAGACATAGAAATGGCCAAGAAGGCAGCCAAGCTGAGCAGCCAGGTTAAATACCGAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS CCA 72 bp GCTTTGAAATGCCTAAATAGCTTCAACGTAGTTGGCTaGGAGCATTCCGGTCCTGCCAGTCCTCTGCACAGT +
Preference number: 6 (lower is better)
Translates to: ALKCLNSFNVVG*EHSGPASPLHS
Trigger: ACTGTGCAGAGGACTGGCAGGACCGGAATGCTCCCAGCCAACTACGTTGAAGCTATTTAGGCATTTCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 72 bp GCAGGAGAGTGTAGTGGTGGTATGACTGTCTGTAGTTaGCGTTGGTGGCAACCTCCTGAGATTTCTTTGCAG +
Preference number: 6 (lower is better)
Translates to: AGECSGGMTVCS*RWWQPPEISLQ
Trigger: CTGCAAAGAAATCTCAGGAGGTTGCCACCAACGCCAACTACAGACAGTCATACCACCACTACACTCTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 72 bp AGAATTACTCTTGGCCAGCAGGATATCTGGGGTGTCTaGCATCACGTGGATGGAGGTTTTGTCAGCATCCCA +
Preference number: 6 (lower is better)
Translates to: RITLGQQDIWGV*HHVDGGFVSIP
Trigger: TGGGATGCTGACAAAACCTCCATCCACGTGATGCCAGACACCCCAGATATCCTGCTGGCCAAGAGTAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 72 bp TCTTCCCGATATTTGATATGGCTGGCCAGATGCTTCTaGTTCTTGGCGTGTGTCAGGGACAAGGTGCTGGAA +
Preference number: 6 (lower is better)
Translates to: SSRYLIWLARCF*FLACVRDKVLE
Trigger: TTCCAGCACCTTGTCCCTGACACACGCCAAGAACCAGAAGCATCTGGCCAGCCATATCAAATATCGGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 72 bp TCCCACATAGCGGCAATGGATCACTTGGGGTGTGTATaGCAGAGAGATCATGTGGCCCTGCATCTTGAAGAA +
Preference number: 6 (lower is better)
Translates to: SHIAAMDHLGCV*QRDHVALHLEE
Trigger: TTCTTCAAGATGCAGGGCCACATGATCTCTCTGCCATACACACCCCAAGTGATCCATTGCCGCTATGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 72 bp CCGGTCGGTCAGGAGTCCACTTCCAGTGGGCTTTGTTaGCTTCGTACTGTTTCTTATAGTCCAGATTGGTGT +
Preference number: 6 (lower is better)
Translates to: PVGQESTSSGLC*LRTVSYSPDWC
Trigger: ACACCAATCTGGACTATAAGAAACAGTACGAAGCCAACAAAGCCCACTGGAAGTGGACTCCTGACCGACCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 72 bp CTCAAGATCTCCTGGGCGTTTCGGACGCGTATAACATaGGGTTCTTCCAGAAGAGACGTCCACTGGTGGAAA +
Preference number: 6 (lower is better)
Translates to: LKISWAFRTRIT*GSSRRDVHWWK
Trigger: TTTCCACCAGTGGACGTCTCTTCTGGAAGAACCCAATGTTATACGCGTCCGAAACGCCCAGGAGATCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 72 bp GATCTGATCTGTGACTTTCCTGACGTGATCATTGACTaGCAAGTCGGGGTGGCAAATCCATTCGTGGAGGCG +
Preference number: 6 (lower is better)
Translates to: DLICDFPDVIID*QVGVANPFVEA
Trigger: CGCCTCCACGAATGGATTTGCCACCCCGACTTGCAAGTCAATGATCACGTCAGGAAAGTCACAGATCAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 90 bp AAATTTTCTCGGTATTTAACCTGGCTGCTCAGCTTGGCTGCCTTCTaGGCCATTTCTATGTCTGGGCGACCGAGCATGCTTAAGCCATGG +
Preference number: 6 (lower is better)
Translates to: KFSRYLTWLLSLAAF*AISMSGRPSMLKPW
Trigger: CCATGGCTTAAGCATGCTCGGTCGCCCAGACATAGAAATGGCCAAGAAGGCAGCCAAGCTGAGCAGCCAGGTTAAATACCGAGAAAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS TCA 72 bp TTTTTCTCACTGAAGATGTCCGCGGCATGTTTGGCATaGTTGACGGACACGGAGTCATTTGGCATCCACCCA +
Preference number: 6 (lower is better)
Translates to: FFSLKMSAACLA*LTDTESFGIHP
Trigger: TGGGTGGATGCCAAATGACTCCGTGTCCGTCAATCATGCCAAACATGCCGCGGACATCTTCAGTGAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS GCA 72 bp GTTTTTCCTGTATTTGATCTGACTGATCTGGTCGCCTaGGGTCTTAGCCAGCAGATGTCTAGGCTCATCGAC +
Preference number: 6 (lower is better)
Translates to: VFPVFDLTDLVA*GLSQQMSRLID
Trigger: GTCGATGAGCCTAGACATCTGCTGGCTAAGACCGCAGGCGACCAGATCAGTCAGATCAAATACAGGAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 72 bp GAAGCATGTTGTAGGTATGGATCACGTTCCTGTAGTTaGCATTGGTGGCCACTTCCTGAGACTTCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: EACCRYGSRSCS*HWWPLPETSWL
Trigger: CAGCCAAGAAGTCTCAGGAAGTGGCCACCAATGCCAACTACAGGAACGTGATCCATACCTACAACATGCTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 72 bp TCGGTAATGCATGTGAATTTGAGCTGGTCTGCAGGCTaGCGATACTTCCTGTCACTCAGGATTTCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: SVMHVNLSWSAG*RYFLSLRISPA
Trigger: AGCTGGAGAAATCCTGAGTGACAGGAAGTATCGCCAGCCTGCAGACCAGCTCAAATTCACATGCATTACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 72 bp GATATTGGCAGAATTACTCTTGGCCAGCAGGATATCTaGGGTGTCTGGCATCACGTGGATGGAGGTTTTGTC +
Preference number: 6 (lower is better)
Translates to: DIGRITLGQQDI*GVWHHVDGGFV
Trigger: GACAAAACCTCCATCCACGTGATGCCAGACACCCCAGATATCCTGCTGGCCAAGAGTAATTCTGCCAATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 72 bp CTGGAAGTCTATATCCAGTGGGCAGGGTGCGCAGGCTaGTTTTGTATAGATTCGAACTCTGGAGCTTGTATG +
Preference number: 6 (lower is better)
Translates to: LEVYIQWAGCAG*FCIDSNSGACM
Trigger: CATACAAGCTCCAGAGTTCGAATCTATACAAAACCAGCCTGCGCACCCTGCCCACTGGATATAGACTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 72 bp GTTGTGTATGAGCCCTGTGCCAAGTGCTTCTTGACATaGTCCTTGTACTTGTTCTCAGACACCAGGTTGCTG +
Preference number: 6 (lower is better)
Translates to: VVYEPCAKCFLT*SLYLFSDTRLL
Trigger: CAGCAACCTGGTGTCTGAGAACAAGTACAAGGACCATGTCAAGAAGCACTTGGCACAGGGCTCATACACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 72 bp TTGGCTGCAGTGATGGGAATAGCATCGCCCAGCACATaGTTGCCCTTGGCTATTAAGTCATACCAATCCCGT +
Preference number: 6 (lower is better)
Translates to: LAAVMGIASPST*LPLAIKSYQSR
Trigger: ACGGGATTGGTATGACTTAATAGCCAAGGGCAACAATGTGCTGGGCGATGCTATTCCCATCACTGCAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CAA 72 bp AACACCATGCCCATGGAATCAGGCACACTTGTGAACTaGACGGTATCTGGGTGCTGTCGATACTTCCTCTCA +
Preference number: 6 (lower is better)
Translates to: NTMPMESGTLVN*TVSGCCRYFLS
Trigger: TGAGAGGAAGTATCGACAGCACCCAGATACCGTCAAGTTCACAAGTGTGCCTGATTCCATGGGCATGGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
ENST00000484968.1
CDS CAA 72 bp AGGACAATTTCCGGAGTGTCGGTAATGCATGTGAATTaGAGCTGGTCTGCAGGCTGGCGATACTTCCTGTCA +
Preference number: 6 (lower is better)
Translates to: RTISGVSVMHVN*SWSAGWRYFLS
Trigger: TGACAGGAAGTATCGCCAGCCTGCAGACCAGCTCAAATTCACATGCATTACCGACACTCCGGAAATTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CAA 72 bp GATCAACTCACTGACAGCCTCTTGTGTCTTCTTGACTaGGCGGATCTCAGGGGTATCGGGAGTTGTATGGAT +
Preference number: 6 (lower is better)
Translates to: DQLTDSLLCLLD*ADLRGIGSCMD
Trigger: ATCCATACAACTCCCGATACCCCTGAGATCCGCCAAGTCAAGAAGACACAAGAGGCTGTCAGTGAGTTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 72 bp GGTAGTGTTGTGTATGAGCCCTGTGCCAAGTGCTTCTaGACATGGTCCTTGTACTTGTTCTCAGACACCAGG +
Preference number: 6 (lower is better)
Translates to: GSVVYEPCAKCF*TWSLYLFSDTR
Trigger: CCTGGTGTCTGAGAACAAGTACAAGGACCATGTCAAGAAGCACTTGGCACAGGGCTCATACACAACACTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 72 bp GTAGCATTCCTGGCCCTCATAAAATCCGGAGTTTCATaGGCCATGGCATTCAGGCCTCTTCCTTTGACTTCC +
Preference number: 6 (lower is better)
Translates to: VAFLALIKSGVS*AMAFRPLPLTS
Trigger: GGAAGTCAAAGGAAGAGGCCTGAATGCCATGGCCAATGAAACTCCGGATTTTATGAGGGCCAGGAATGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS CAA 90 bp GCCTGGACAAGTTCAGGGGCATCAGGAGGAAGCAGGTACTTATCCTaGGTGTCTTCCCAGTTCTGCTTGTATAAAACCTTACTGACTTGC +
Preference number: 6 (lower is better)
Translates to: AWTSSGASGGSRYLS*VSSQFCLYKTLLTC
Trigger: GCAAGTCAGTAAGGTTTTATACAAGCAGAACTGGGAAGACACCAAGGATAAGTACCTGCTTCCTCCTGATGCCCCTGAACTTGTCCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CAA 90 bp GCAATATCAGTAGCATTCCTGGCCCTCATAAAATCCGGAGTTTCATaGGCCATGGCATTCAGGCCTCTTCCTTTGACTTCCAGTTCCAGG +
Preference number: 6 (lower is better)
Translates to: AISVAFLALIKSGVS*AMAFRPLPLTSSSR
Trigger: CCTGGAACTGGAAGTCAAAGGAAGAGGCCTGAATGCCATGGCCAATGAAACTCCGGATTTTATGAGGGCCAGGAATGCTACTGATATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS GCA 72 bp GTCAGCTTTGTATTCAACATCGCTCTGCAGCGCATATaGCTTCTTGGCAAGGTCCACATTGATGCTATCAGG +
Preference number: 6 (lower is better)
Translates to: VSFVFNIALQRI*LLGKVHIDAIR
Trigger: CCTGATAGCATCAATGTGGACCTTGCCAAGAAGGCATATGCGCTGCAGAGCGATGTTGAATACAAAGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS GCA 72 bp TCATATTCTTCCCGATATTTGATATGGCTGGCCAGATaGTTCTGGTTCTTGGCGTGTGTCAGGGACAAGGTG +
Preference number: 6 (lower is better)
Translates to: SYSSRYLIWLAR*FWFLACVRDKV
Trigger: CACCTTGTCCCTGACACACGCCAAGAACCAGAAGCATCTGGCCAGCCATATCAAATATCGGGAAGAATATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS GCA 72 bp GTCCAGATTGGTGTTGACTTTGTAGGCGTCCTTGGCTaGTTTGATATGAACAGCATCTGGCTCAATGGTGCA +
Preference number: 6 (lower is better)
Translates to: VQIGVDFVGVLG*FDMNSIWLNGA
Trigger: TGCACCATTGAGCCAGATGCTGTTCATATCAAAGCAGCCAAGGACGCCTACAAAGTCAACACCAATCTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 72 bp ACTCTGAACGTCATTGCAGTGATGGGCATGAACAAATaGCACAGCATCTGGAGGCAAAATGTAACCTGTGGC +
Preference number: 6 (lower is better)
Translates to: TLNVIAVMGMNK*HSIWRQNVTCG
Trigger: GCCACAGGTTACATTTTGCCTCCAGATGCTGTGCCATTTGTTCATGCCCATCACTGCAATGACGTTCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 72 bp GCTGGTAACATTGTTGACTCTCCGGACGTGGACAAATaGAACATCTTTGGGGCCAAGTGTATACCCATATGC +
Preference number: 6 (lower is better)
Translates to: AGNIVDSPDVDK*NIFGAKCIPIC
Trigger: GCATATGGGTATACACTTGGCCCCAAAGATGTTCCATTTGTCCACGTCCGGAGAGTCAACAATGTTACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 72 bp AGTCTCTCGCTGGTAACATTGTTGACTCTCCGGACGTaGACAAATGGAACATCTTTGGGGCCAAGTGTATAC +
Preference number: 6 (lower is better)
Translates to: SLSLVTLLTLRT*TNGTSLGPSVY
Trigger: GTATACACTTGGCCCCAAAGATGTTCCATTTGTCCACGTCCGGAGAGTCAACAATGTTACCAGCGAGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 72 bp TTGCTTCTTGGCCACTTCCATAGCATGTTTCACCTCTaGTGGCTCCAGCATGATGGAGTAGTTGGATTTTCC +
Preference number: 6 (lower is better)
Translates to: LLLGHFHSMFHL*WLQHDGVVGFS
Trigger: GGAAAATCCAACTACTCCATCATGCTGGAGCCACCAGAGGTGAAACATGCTATGGAAGTGGCCAAGAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS CCA 72 bp CTGCATCTGCTGAGACTCTTTGGCAGTGATGTACGTTaGTGTTTCAAAGTCCAGCATGGGTTTTCCTCGTTC +
Preference number: 6 (lower is better)
Translates to: LHLLRLFGSDVR*CFKVQHGFSSF
Trigger: GAACGAGGAAAACCCATGCTGGACTTTGAAACACCAACGTACATCACTGCCAAAGAGTCTCAGCAGATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
ENST00000483418.1
CDS CAA 72 bp CTGACCACATCCTGGGCTTTCTTAGCCGCCACGACATaGAACATATCATGGGGCGTGTTGTATTTGGACTTT +
Preference number: 6 (lower is better)
Translates to: LTTSWAFLAATT*NISWGVLYLDF
Trigger: AAAGTCCAAATACAACACGCCCCATGATATGTTCAATGTCGTGGCGGCTAAGAAAGCCCAGGATGTGGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CAA 72 bp GCTGCAGTGATGGGAATAGCATCGCCCAGCACATTGTaGCCCTTGGCTATTAAGTCATACCAATCCCGTTTA +
Preference number: 6 (lower is better)
Translates to: AAVMGIASPSTL*PLAIKSYQSRL
Trigger: TAAACGGGATTGGTATGACTTAATAGCCAAGGGCAACAATGTGCTGGGCGATGCTATTCCCATCACTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CAA 72 bp CACAGCATCTGGAGGCAAAATGTAACCTGTGGCTTTTaGTCTCTCCCAGCCTTCCTTGTAGAGATACTGGTC +
Preference number: 6 (lower is better)
Translates to: HSIWRQNVTCGF*SLPAFLVEILV
Trigger: GACCAGTATCTCTACAAGGAAGGCTGGGAGAGACAAAAAGCCACAGGTTACATTTTGCCTCCAGATGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 90 bp TTCTTTGCTAGGACAATTTCCGGAGTGTCGGTAATGCATGTGAATTaGAGCTGGTCTGCAGGCTGGCGATACTTCCTGTCACTCAGGATT +
Preference number: 6 (lower is better)
Translates to: FFARTISGVSVMHVN*SWSAGWRYFLSLRI
Trigger: AATCCTGAGTGACAGGAAGTATCGCCAGCCTGCAGACCAGCTCAAATTCACATGCATTACCGACACTCCGGAAATTGTCCTAGCAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CAA 90 bp TTCTTGACTTGGCGGATCTCAGGGGTATCGGGAGTTGTATGGATCTaGTCTTTCAGTTTGTGGTACAATTCCCGATACAGTCTCTCGCTG +
Preference number: 6 (lower is better)
Translates to: FLTWRISGVSGVVWI*SFSLWYNSRYSLSL
Trigger: CAGCGAGAGACTGTATCGGGAATTGTACCACAAACTGAAAGACAAGATCCATACAACTCCCGATACCCCTGAGATCCGCCAAGTCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 90 bp TTTAATATCACTGGTGATGTCTCCCACATAGCGGCAATGGATCACTaGGGGTGTGTATGGCAGAGAGATCATGTGGCCCTGCATCTTGAA +
Preference number: 6 (lower is better)
Translates to: FNITGDVSHIAAMDH*GCVWQRDHVALHLE
Trigger: TTCAAGATGCAGGGCCACATGATCTCTCTGCCATACACACCCCAAGTGATCCATTGCCGCTATGTGGGAGACATCACCAGTGATATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 90 bp TTGACATTGCTGACCACATCCTGGGCTTTCTTAGCCGCCACGACATaGAACATATCATGGGGCGTGTTGTATTTGGACTTTGTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: LTLLTTSWAFLAATT*NISWGVLYLDFVFS
Trigger: TGAGAAGACAAAGTCCAAATACAACACGCCCCATGATATGTTCAATGTCGTGGCGGCTAAGAAAGCCCAGGATGTGGTCAGCAATGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CAA 90 bp AACAAATGGCACAGCATCTGGAGGCAAAATGTAACCTGTGGCTTTTaGTCTCTCCCAGCCTTCCTTGTAGAGATACTGGTCCAGTATCCT +
Preference number: 6 (lower is better)
Translates to: NKWHSIWRQNVTCGF*SLPAFLVEILVQYP
Trigger: AGGATACTGGACCAGTATCTCTACAAGGAAGGCTGGGAGAGACAAAAAGCCACAGGTTACATTTTGCCTCCAGATGCTGTGCCATTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 90 bp CGGATCTCAGGGGTATCGGGAGTTGTATGGATCTTGTCTTTCAGTTaGTGGTACAATTCCCGATACAGTCTCTCGCTGGTAACATTGTTG +
Preference number: 6 (lower is better)
Translates to: RISGVSGVVWILSFS*WYNSRYSLSLVTLL
Trigger: CAACAATGTTACCAGCGAGAGACTGTATCGGGAATTGTACCACAAACTGAAAGACAAGATCCATACAACTCCCGATACCCCTGAGATCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 90 bp CCCTCCCCCAACCCAGGCTCAGTTACCTGTAATAGTCTCCTGATCTaGGTCATTCCGTTTTTGTTCCATTTCTACCACTTTCCTCTGAAT +
Preference number: 6 (lower is better)
Translates to: PSPNPGSVTCNSLLI*VIPFLFHFYHFPLN
Trigger: ATTCAGAGGAAAGTGGTAGAAATGGAACAAAAACGGAATGACCAAGATCAGGAGACTATTACAGGTAACTGAGCCTGGGTTGGGGGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000497809.1
CDS TCA 72 bp TTTCTGACTGTGTGCAATGTAGGGGGTCATGAACTTTaGAGGATCCACTTTCTTCCGGATGACCTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: FLTVCNVGGHEL*RIHFLPDDLPP
Trigger: AGGAGGAAGGTCATCCGGAAGAAAGTGGATCCTTCAAAGTTCATGACCCCCTACATTGCACACAGTCAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS TCA 72 bp TCCTGCTGCCTTCAGCTGCCTAAGCTGTGGGTTCTCTaGAGCAGGAAGCACATTATAATCTGCTTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: SCCLQLPKLWVL*SRKHIIICFSF
Trigger: AAAGGAAAAGCAGATTATAATGTGCTTCCTGCTTCAGAGAACCCACAGCTTAGGCAGCTGAAGGCAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS TCA 72 bp TTAAACTGGAAGTTGCTCGGGTGCTGGCGGTATTTCTaGTCACTGGCATATTCAGTTGCTTTCTTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: LNWKLLGCWRYF*SLAYSVAFLAF
Trigger: GAAGGCCAAGAAAGCAACTGAATATGCCAGTGATCAGAAATACCGCCAGCACCCGAGCAACTTCCAGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS TCA 72 bp GTTTTGTATAGATTCGAACTCTGGAGCTTGTATGCATaGAGGGCCCGGTCCAGATCCACGGTTTTGGTAGTT +
Preference number: 6 (lower is better)
Translates to: VLYRFELWSLYA*RARSRSTVLVV
Trigger: AACTACCAAAACCGTGGATCTGGACCGGGCCCTTCATGCATACAAGCTCCAGAGTTCGAATCTATACAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS TCA 72 bp TTTGTATCACTGACATGCTTGGTCACTTCCTTGACGTaGACAGTGTCCCGGGTCTCTGGTAGTGTTGTGTAT +
Preference number: 6 (lower is better)
Translates to: FVSLTCLVTSLT*TVSRVSGSVVY
Trigger: ATACACAACACTACCAGAGACCCGGGACACTGTTCACGTCAAGGAAGTGACCAAGCATGTCAGTGATACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS GCA 72 bp TATGATGGCATCTCCATCCTTGAAGGACACCTCATCTaGATCAGCAGCCATATAGTCATACATGGCACGGAA +
Preference number: 6 (lower is better)
Translates to: YDGISILEGHLI*ISSHIVIHGTE
Trigger: TTCCGTGCCATGTATGACTATATGGCTGCTGATGCAGATGAGGTGTCCTTCAAGGATGGAGATGCCATCATA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS GCA 72 bp GAATCAGGCACACTTGTGAACTTGACGGTATCTGGGTaGTGTCGATACTTCCTCTCATTTAATGCATCGCCT +
Preference number: 6 (lower is better)
Translates to: ESGTLVNLTVSG*CRYFLSFNASP
Trigger: AGGCGATGCATTAAATGAGAGGAAGTATCGACAGCACCCAGATACCGTCAAGTTCACAAGTGTGCCTGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
ENST00000484968.1
CDS CCA 72 bp GGCATTAACTTTAGCCTGGATGAACTGGGGCAGGTCTaGTGGCAGGTTGTATTTGTGAATAATTTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: GINFSLDELGQV*WQVVFVNNFLS
Trigger: GGAGAGGAAATTATTCACAAATACAACCTGCCACCAGACCTGCCCCAGTTCATCCAGGCTAAAGTTAATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 72 bp GGTGCTGACGGTAAACATGGTCACTCAAAATCTGGGTaGCTCGTTTATTTTTCTCATCCTCGAGAGAACCAC +
Preference number: 6 (lower is better)
Translates to: GADGKHGHSKSG*LVYFSHPRENH
Trigger: GTGGTTCTCTCGAGGATGAGAAAAATAAACGAGCCACCCAGATTTTGAGTGACCATGTTTACCGTCAGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 72 bp TCTGGTTTCCAGCGTGATGATGGGGTCTCTCTTTGGTaGCAAGTTCAACATACAGATACTGACTCTGAAGCT +
Preference number: 6 (lower is better)
Translates to: SGFQRDDGVSLW*QVQHTDTDSEA
Trigger: AGCTTCAGAGTCAGTATCTGTATGTTGAACTTGCCACCAAAGAGAGACCCCATCATCACGCTGGAAACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 72 bp CTTCTTGGCCACTTCCATAGCATGTTTCACCTCTGGTaGCTCCAGCATGATGGAGTAGTTGGATTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: LLGHFHSMFHLW*LQHDGVVGFSF
Trigger: AAAGGAAAATCCAACTACTCCATCATGCTGGAGCCACCAGAGGTGAAACATGCTATGGAAGTGGCCAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS CCA 72 bp AAAGCACTTACATCACTAAGCTGTTTCGTGTTGAGCTaGGCTTGCAACAGTACAGGAGAATCAGTGACTGCC +
Preference number: 6 (lower is better)
Translates to: KALTSLSCFVLS*ACNSTGESVTA
Trigger: GGCAGTCACTGATTCTCCTGTACTGTTGCAAGCCCAGCTCAACACGAAACAGCTTAGTGATGTAAGTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489048.1
CDS CAA 72 bp ATTCAGATCACTAAGCTGTTTCGTGTTGAGCTGGGCTaGCAACAGTACAGGAGAATCAGTGACTGCCGTGAA +
Preference number: 6 (lower is better)
Translates to: IQITKLFRVELG*QQYRRISDCRE
Trigger: TTCACGGCAGTCACTGATTCTCCTGTACTGTTGCAAGCCCAGCTCAACACGAAACAGCTTAGTGATCTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CAA 72 bp GGGGTATCGGGAGTTGTATGGATCTTGTCTTTCAGTTaGTGGTACAATTCCCGATACAGTCTCTCGCTGGTA +
Preference number: 6 (lower is better)
Translates to: GVSGVVWILSFS*WYNSRYSLSLV
Trigger: TACCAGCGAGAGACTGTATCGGGAATTGTACCACAAACTGAAAGACAAGATCCATACAACTCCCGATACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 72 bp TGGCGGATCTCAGGGGTATCGGGAGTTGTATGGATCTaGTCTTTCAGTTTGTGGTACAATTCCCGATACAGT +
Preference number: 6 (lower is better)
Translates to: WRISGVSGVVWI*SFSLWYNSRYS
Trigger: ACTGTATCGGGAATTGTACCACAAACTGAAAGACAAGATCCATACAACTCCCGATACCCCTGAGATCCGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 72 bp ACTTACATCACTAAGCTGTTTCGTGTTGAGCTGGGCTaGCAACAGTACAGGAGAATCAGTGACTGCCGTGAA +
Preference number: 6 (lower is better)
Translates to: TYITKLFRVELG*QQYRRISDCRE
Trigger: TTCACGGCAGTCACTGATTCTCCTGTACTGTTGCAAGCCCAGCTCAACACGAAACAGCTTAGTGATGTAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489048.1
CDS CAA 90 bp ACATTGACTGCAGGATCTGTAAGTCCTGCAGACAAGTGTGATGCTTaGAAATGCCTAAATAGCTTCAACGTAGTTGGCTGGGAGCATTCC +
Preference number: 6 (lower is better)
Translates to: TLTAGSVSPADKCDA*KCLNSFNVVGWEHS
Trigger: GGAATGCTCCCAGCCAACTACGTTGAAGCTATTTAGGCATTTCAAAGCATCACACTTGTCTGCAGGACTTACAGATCCTGCAGTCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 90 bp CACCCGTCTCATCTCGGGGGTATCCAATACATAGGCAGCTTTGCCTaGTATTTGTTTCCGGAAACTATCAGAATAAAGAACCTGATGCAG +
Preference number: 6 (lower is better)
Translates to: HPSHLGGIQYIGSFA*YLFPETIRIKNLMQ
Trigger: CTGCATCAGGTTCTTTATTCTGATAGTTTCCGGAAACAAATACAAGGCAAAGCTGCCTATGTATTGGATACCCCCGAGATGAGACGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497809.1
CDS TCA 72 bp TTCAACGCACTCCTCATCTTTTGGAAATCCAGACAGTaGACCACACCAGGGAATTCACCGATCACTTTTCCA +
Preference number: 6 (lower is better)
Translates to: FNALLIFWKSRQ*TTPGNSPITFP
Trigger: TGGAAAAGTGATCGGTGAATTCCCTGGTGTGGTTCACTGTCTGGATTTCCAAAAGATGAGGAGTGCGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS TCA 72 bp GAGTTTCATTGGCCATGGCATTCAGGCCTCTTCCTTTaGCTTCCAGTTCCAGGTCTCGCTTATATTCTTTCT +
Preference number: 6 (lower is better)
Translates to: EFHWPWHSGLFL*LPVPGLAYILS
Trigger: AGAAAGAATATAAGCGAGACCTGGAACTGGAAGTCAAAGGAAGAGGCCTGAATGCCATGGCCAATGAAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS GCA 72 bp GGAAGCAGGTACTTATCCTTGGTGTCTTCCCAGTTCTaGTTGTATAAAACCTTACTGACTTGCTGCGACACT +
Preference number: 6 (lower is better)
Translates to: GSRYLSLVSSQF*LYKTLLTCCDT
Trigger: AGTGTCGCAGCAAGTCAGTAAGGTTTTATACAAGCAGAACTGGGAAGACACCAAGGATAAGTACCTGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS GCA 72 bp TTCCTTGTATTTATAATCACTGGCAATGTTTCTCGATaGCTTGGCTGCAGTGATGGGAATAGCATCGCCCAG +
Preference number: 6 (lower is better)
Translates to: FLVFIITGNVSR*LGCSDGNSIAQ
Trigger: CTGGGCGATGCTATTCCCATCACTGCAGCCAAGGCATCGAGAAACATTGCCAGTGATTATAAATACAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 72 bp GTCATACATGGCACGGAAGATTTTTCCAGCAGTAGATaGATGAGATGGGATGGAAGATACCGTTGTCTGTTG +
Preference number: 6 (lower is better)
Translates to: VIHGTEDFSSSR*MRWDGRYRCLL
Trigger: CAACAGACAACGGTATCTTCCATCCCATCTCATCCATCTACTGCTGGAAAAATCTTCCGTGCCATGTATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS CCA 72 bp CTGCATTTTGGCTACATTCATGGACAACACAAGTTTTaGGTCATCTTGCAGACTCCGGAATCCAACATGGTG +
Preference number: 6 (lower is better)
Translates to: LHFGYIHGQHKF*VILQTPESNMV
Trigger: CACCATGTTGGATTCCGGAGTCTGCAAGATGACCCAAAACTTGTGTTGTCCATGAATGTAGCCAAAATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 72 bp GTAAGCCCTCTTGGCTCTGATGAGGATTGGCGTATCTaGAACCGGAGTGTACTTGTCTTTCATCTTTTCATA +
Preference number: 6 (lower is better)
Translates to: VSPLGSDEDWRI*NRSVLVFHLFI
Trigger: TATGAAAAGATGAAAGACAAGTACACTCCGGTTCCAGATACGCCAATCCTCATCAGAGCCAAGAGGGCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000420924.1
ENST00000427231.7
CDS CCA 72 bp TGGGTGTGTCGTGGATTGTGGTGTAGCCTCTGGGTTTaGCCTTGTTGTATTCCAATTTATAAAGGATATCGC +
Preference number: 6 (lower is better)
Translates to: WVCRGLWCSLWV*PCCIPIYKGYR
Trigger: GCGATATCCTTTATAAATTGGAATACAACAAGGCCAAACCCAGAGGCTACACCACAATCCACGACACACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000480784.1
CDS CCA 72 bp GCAACATGGGTGTGTCGTGGATTGTGGTGTAGCCTCTaGGTTTGGCCTTGTTGTATTCCAATTTATAAAGGA +
Preference number: 6 (lower is better)
Translates to: ATWVCRGLWCSL*VWPCCIPIYKG
Trigger: TCCTTTATAAATTGGAATACAACAAGGCCAAACCCAGAGGCTACACCACAATCCACGACACACCCATGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000480784.1
CDS CCA 72 bp GTCGATCAGCCACTGTGGTGTAATGCAGGTTCTCTTTaGCATCTTTTCTGTAAGCGACATCACTTTGCTTCT +
Preference number: 6 (lower is better)
Translates to: VDQPLWCNAGSL*HLFCKRHHFAS
Trigger: AGAAGCAAAGTGATGTCGCTTACAGAAAAGATGCCAAAGAGAACCTGCATTACACCACAGTGGCTGATCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS CCA 72 bp CCTCTTTTAGGTGAAGCTGCTCCAGATTATCGGGTATaGTGTGGTAGTGGCCTTTACTCTTCTCATACTTCT +
Preference number: 6 (lower is better)
Translates to: PLLGEAAPDYRV*CGSGLYSSHTS
Trigger: AGAAGTATGAGAAGAGTAAAGGCCACTACCACACCATACCCGATAATCTGGAGCAGCTTCACCTAAAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
ENST00000483418.1
CDS CCA 72 bp GAAGTTCTTTTGGTTCTCCCGGACTCTCTGTATCTCTaGGGTGTCCAAAACAGTCTCATAATACGACATGGA +
Preference number: 6 (lower is better)
Translates to: EVLLVLPDSLYL*GVQNSLIIRHG
Trigger: TCCATGTCGTATTATGAGACTGTTTTGGACACCCCAGAGATACAGAGAGTCCGGGAGAACCAAAAGAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS CAA 72 bp GCAGGATCTGTAAGTCCTGCAGACAAGTGTGATGCTTaGAAATGCCTAAATAGCTTCAACGTAGTTGGCTGG +
Preference number: 6 (lower is better)
Translates to: AGSVSPADKCDA*KCLNSFNVVGW
Trigger: CCAGCCAACTACGTTGAAGCTATTTAGGCATTTCAAAGCATCACACTTGTCTGCAGGACTTACAGATCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 72 bp CTCCCTCTACCTTGTAGTTCAAATCACTTAGCTGCTTaGTGTTATGCTGAGCCAACACCATGCCCATGGAAT +
Preference number: 6 (lower is better)
Translates to: LPLPCSSNHLAA*CYAEPTPCPWN
Trigger: ATTCCATGGGCATGGTGTTGGCTCAGCATAACACAAAGCAGCTAAGTGATTTGAACTACAAGGTAGAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
ENST00000484968.1
CDS CAA 72 bp TACAATTCCCGATACAGTCTCTCGCTGGTAACATTGTaGACTCTCCGGACGTGGACAAATGGAACATCTTTG +
Preference number: 6 (lower is better)
Translates to: YNSRYSLSLVTL*TLRTWTNGTSL
Trigger: CAAAGATGTTCCATTTGTCCACGTCCGGAGAGTCAACAATGTTACCAGCGAGAGACTGTATCGGGAATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 90 bp CACCCGTCTCATCTCGGGGGTATCCAATACATAGGCAGCTTTGCCTaGTATTTGTTTCCGGAAACTATCAGAATAAAGAACCGAGCTAAT +
Preference number: 6 (lower is better)
Translates to: HPSHLGGIQYIGSFA*YLFPETIRIKNRAN
Trigger: ATTAGCTCGGTTCTTTATTCTGATAGTTTCCGGAAACAAATACAAGGCAAAGCTGCCTATGTATTGGATACCCCCGAGATGAGACGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
ENST00000498015.2
CDS CAA 90 bp TGCTTTGTAATTCAGATCACTAAGCTGTTTCGTGTTGAGCTGGGCTaGCAACAGTACAGGAGAATCAGTGACTGCCGTGAATTTGGTCTT +
Preference number: 6 (lower is better)
Translates to: CFVIQITKLFRVELG*QQYRRISDCREFGL
Trigger: AAGACCAAATTCACGGCAGTCACTGATTCTCCTGTACTGTTGCAAGCCCAGCTCAACACGAAACAGCTTAGTGATCTGAATTACAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CAA 90 bp ATAAAATCCGGAGTTTCATTGGCCATGGCATTCAGGCCTCTTCCTTaGACTTCCAGTTCCAGGTCTCGCTTATATTCTTTCTCATTGAGG +
Preference number: 6 (lower is better)
Translates to: IKSGVSLAMAFRPLP*TSSSRSRLYSFSLR
Trigger: CCTCAATGAGAAAGAATATAAGCGAGACCTGGAACTGGAAGTCAAAGGAAGAGGCCTGAATGCCATGGCCAATGAAACTCCGGATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS CAA 90 bp AATCAAAGCACTTACATCACTAAGCTGTTTCGTGTTGAGCTGGGCTaGCAACAGTACAGGAGAATCAGTGACTGCCGTGAATTTGGTCTT +
Preference number: 6 (lower is better)
Translates to: NQSTYITKLFRVELG*QQYRRISDCREFGL
Trigger: AAGACCAAATTCACGGCAGTCACTGATTCTCCTGTACTGTTGCAAGCCCAGCTCAACACGAAACAGCTTAGTGATGTAAGTGCTTTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489048.1
CDS TCA 72 bp CTATGGGCACCCAGCCGATCCCTTTCATCCAATTGGTaGAGTCAGATTTGTACAGATTATCACTCTGAATCT +
Preference number: 6 (lower is better)
Translates to: LWAPSRSLSSNW*SQICTDYHSES
Trigger: AGATTCAGAGTGATAATCTGTACAAATCTGACTTCACCAATTGGATGAAAGGGATCGGCTGGGTGCCCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS TCA 72 bp AACTGGCAAGTTGGCTTGTATTCAGGACATGATTCATaGTCAGAGACTCCTTCATGTCAGTCACGGGTTTGT +
Preference number: 6 (lower is better)
Translates to: NWQVGLYSGHDS*SETPSCQSRVC
Trigger: ACAAACCCGTGACTGACATGAAGGAGTCTCTGATCATGAATCATGTCCTGAATACAAGCCAACTTGCCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
ENST00000483418.1
CDS GCA 72 bp CCCGTTTATAACAGACGTCACTTATATTGTAAGCATTaGACTTGGCCTGGAGAAACTGAGGAAGATCAGGAC +
Preference number: 6 (lower is better)
Translates to: PVYNRRHLYCKH*TWPGETEEDQD
Trigger: GTCCTGATCTTCCTCAGTTTCTCCAGGCCAAGTGCAATGCTTACAATATAAGTGACGTCTGTTATAAACGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS GCA 72 bp ATGGTGTATAAATGCTTGTTCATGGTATGTGCATTCTaGTTGGCAAGCACCATGTCCATGGAATCAGTCAGC +
Preference number: 6 (lower is better)
Translates to: MVYKCLFMVCAF*LASTMSMESVS
Trigger: GCTGACTGATTCCATGGACATGGTGCTTGCCAAGCAGAATGCACATACCATGAACAAGCATTTATACACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 72 bp CTTCTTTACTCGTTCAGTGATAGGATCTGTCACCACTaGTGTGAAGCAACCCTTGTGTTTCTCAAAGTCTTC +
Preference number: 6 (lower is better)
Translates to: LLYSFSDRICHH*CEATLVFLKVF
Trigger: GAAGACTTTGAGAAACACAAGGGTTGCTTCACACCAGTGGTGACAGATCCTATCACTGAACGAGTAAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
ENST00000497809.1
ENST00000498015.2
CDS CCA 72 bp CACTTGATTGGTTACTTTCTTGGCAAATTCTATATCTaGAGGATCAGCCAGAGGCGTGAATTGAGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: HLIGYFLGKFYI*RISQRRELSLL
Trigger: CAGCAAGCTCAATTCACGCCTCTGGCTGATCCTCCAGATATAGAATTTGCCAAGAAAGTAACCAATCAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 72 bp CCTCTGGGCCTGGTTAATTTTAGACTGTACTGTAATTaGAGCATCTTCAATCGAGGTAAACTTGAGGGTGTC +
Preference number: 6 (lower is better)
Translates to: PLGLVNFRLYCN*SIFNRGKLEGV
Trigger: GACACCCTCAAGTTTACCTCGATTGAAGATGCTCCAATTACAGTACAGTCTAAAATTAACCAGGCCCAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 72 bp CATGGCATCAGGAATGCTGGTGAACTTGTTTCTGTCTaGAGGCTGACGATATTTCTTCTCACTGATGATTTC +
Preference number: 6 (lower is better)
Translates to: HGIRNAGELVSV*RLTIFLLTDDF
Trigger: GAAATCATCAGTGAGAAGAAATATCGTCAGCCTCCAGACAGAAACAAGTTCACCAGCATTCCTGATGCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 72 bp GTATCGGGAGTTGTATGGATCTTGTCTTTCAGTTTGTaGTACAATTCCCGATACAGTCTCTCGCTGGTAACA +
Preference number: 6 (lower is better)
Translates to: VSGVVWILSFSL*YNSRYSLSLVT
Trigger: TGTTACCAGCGAGAGACTGTATCGGGAATTGTACCACAAACTGAAAGACAAGATCCATACAACTCCCGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CCA 72 bp GTAGGCGTCCTTGGCTGCTTTGATATGAACAGCATCTaGCTCAATGGTGCAGTTGGATTTATTTCTTTGGTA +
Preference number: 6 (lower is better)
Translates to: VGVLGCFDMNSI*LNGAVGFISLV
Trigger: TACCAAAGAAATAAATCCAACTGCACCATTGAGCCAGATGCTGTTCATATCAAAGCAGCCAAGGACGCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 72 bp GCTGGCAATTGCCTGAGATTTCTTAGCTTGAGTGACTaGGAGCATATCAAGAGGTGCCGTGTAGATAGTTTT +
Preference number: 6 (lower is better)
Translates to: AGNCLRFLSLSD*EHIKRCRVDSF
Trigger: AAAACTATCTACACGGCACCTCTTGATATGCTCCAAGTCACTCAAGCTAAGAAATCTCAGGCAATTGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CAA 72 bp GTGTATAAATGCTTGTTCATGGTATGTGCATTCTGCTaGGCAAGCACCATGTCCATGGAATCAGTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: VYKCLFMVCAFC*ASTMSMESVSF
Trigger: GAAGCTGACTGATTCCATGGACATGGTGCTTGCCAAGCAGAATGCACATACCATGAACAAGCATTTATACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CAA 72 bp GTGTTTTTGTCATCAGTGACAGAAAGCTTGCAACCCTaGAGGAACTCCCGGTCCAGCTTATATTCAAAATCG +
Preference number: 6 (lower is better)
Translates to: VFLSSVTESLQP*RNSRSSLYSKS
Trigger: CGATTTTGAATATAAGCTGGACCGGGAGTTCCTCAAGGGTTGCAAGCTTTCTGTCACTGATGACAAAAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 90 bp GTGCTTATAATCAACGTCGCTGGCAATTGCCTGAGATTTCTTAGCTaGAGTGACTTGGAGCATATCAAGAGGTGCCGTGTAGATAGTTTT +
Preference number: 6 (lower is better)
Translates to: VLIINVAGNCLRFLS*SDLEHIKRCRVDSF
Trigger: AAAACTATCTACACGGCACCTCTTGATATGCTCCAAGTCACTCAAGCTAAGAAATCTCAGGCAATTGCCAGCGACGTTGATTATAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CAA 90 bp CTTAGGATCATCTCTCATCGTCGGGACACCAACATAATGACCTTTTaGCTTCACATGTTCAGCTTTGTATTTCAGCTCACTCTGAACGTC +
Preference number: 6 (lower is better)
Translates to: LRIISHRRDTNIMTF*LHMFSFVFQLTLNV
Trigger: GACGTTCAGAGTGAGCTGAAATACAAAGCTGAACATGTGAAGCAAAAAGGTCATTATGTTGGTGTCCCGACGATGAGAGATGATCCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 90 bp TCTCATCTCGGGGGTATCCAATACATAGGCAGCTTTGCCTTGTATTaGTTTCCGGAAACTATCAGAATAAAGAACCTGATGCAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: SHLGGIQYIGSFALY*FPETIRIKNLMQER
Trigger: TCTCTCCTGCATCAGGTTCTTTATTCTGATAGTTTCCGGAAACAAATACAAGGCAAAGCTGCCTATGTATTGGATACCCCCGAGATGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497809.1
CDS TCA 72 bp TGGCGGCCAAGACTGACACCATATCAGCAGGTATATTaGTTTTGGCCTTTGTTTTGTGATAGTCCTCTTTGT +
Preference number: 6 (lower is better)
Translates to: WRPRLTPYQQVY*FWPLFCDSPLC
Trigger: ACAAAGAGGACTATCACAAAACAAAGGCCAAAATCAATATACCTGCTGATATGGTGTCAGTCTTGGCCGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS TCA 72 bp CAGGGTTTGTTACATCTCATTAGAAGGAGGCCAAGATaGGAGGGACTGCTAAACCATTCTAGTACTTACATC +
Preference number: 6 (lower is better)
Translates to: QGLLHLIRRRPR*EGLLNHSSTYI
Trigger: GATGTAAGTACTAGAATGGTTTAGCAGTCCCTCTCATCTTGGCCTCCTTCTAATGAGATGTAACAAACCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480784.1
CDS GCA 72 bp CCTCTTGTCCATGTTCAGTTTGTTACTCTTGTTAAGTaGCTGTTCCATTGTGTCCATGGCGTAAGTGAACTT +
Preference number: 6 (lower is better)
Translates to: PLVHVQFVTLVK*LFHCVHGVSEL
Trigger: AAGTTCACTTACGCCATGGACACAATGGAACAGGCACTTAACAAGAGTAACAAACTGAACATGGACAAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS GCA 72 bp TTCTTTATATTTTACATCACTGACTGTGTCAGTGACTaGTCGGTGGTGGAAATGCTCTGGACGATCAGGAAT +
Preference number: 6 (lower is better)
Translates to: FFIFYITDCVSD*SVVEMLWTIRN
Trigger: ATTCCTGATCGTCCAGAGCATTTCCACCACCGAGCAGTCACTGACACAGTCAGTGATGTAAAATATAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000420924.1
ENST00000427231.7
CDS GCA 72 bp ATAGTGACTGTGACCACATACAGCACTGTATTTCTCTaGAGCTTGCTGAGTTCAGCTAGATCAGTGATGTTA +
Preference number: 6 (lower is better)
Translates to: IVTVTTYSTVFL*SLLSSARSVML
Trigger: TAACATCACTGATCTAGCTGAACTCAGCAAGCTGCAGAGAAATACAGTGCTGTATGTGGTCACAGTCACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489048.1
CDS CAA 72 bp TCTTTGTATTTCAGATCACTGACTTCATCTTTAACCTaGCGGACATGCAGCAACATGGGTGTGTCGTGGATT +
Preference number: 6 (lower is better)
Translates to: SLYFRSLTSSLT*RTCSNMGVSWI
Trigger: AATCCACGACACACCCATGTTGCTGCATGTCCGCAAGGTTAAAGATGAAGTCAGTGATCTGAAATACAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 72 bp GTTGTAGAGTGGGCTTTAAGGTATCTAATTGTCCTCTaGAAACACCAGAGTGGGAGATGGTATCTAGCTTTC +
Preference number: 6 (lower is better)
Translates to: VVEWALRYLIVL*KHQSGRWYLAF
Trigger: GAAAGCTAGATACCATCTCCCACTCTGGTGTTTCAAGAGGACAATTAGATACCTTAAAGCCCACTCTACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480784.1
CDS CAA 72 bp ACTGTGACCACATACAGCACTGTATTTCTCTGCAGCTaGCTGAGTTCAGCTAGATCAGTGATGTTAGTGTTT +
Preference number: 6 (lower is better)
Translates to: TVTTYSTVFLCS*LSSARSVMLVF
Trigger: AAACACTAACATCACTGATCTAGCTGAACTCAGCAAGCTGCAGAGAAATACAGTGCTGTATGTGGTCACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489048.1
CDS CAA 90 bp TATCACTCTGTATGCGATTCATATTCCTGGTCAGCTCAATGTTCATaGCATCTGGAAGGAGGATGTACTTGTGAATCAGGTGCTTGTAGT +
Preference number: 6 (lower is better)
Translates to: YHSVCDSYSWSAQCS*HLEGGCTCESGACS
Trigger: ACTACAAGCACCTGATTCACAAGTACATCCTCCTTCCAGATGCAATGAACATTGAGCTGACCAGGAATATGAATCGCATACAGAGTGATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CAA 90 bp CAATCAATGGTGTATAAATGCTTGTTCATGGTATGTGCATTCTGCTaGGCAAGCACCATGTCCATGGAATCAGTCAGCTTCTTAAACTGG +
Preference number: 6 (lower is better)
Translates to: QSMVYKCLFMVCAFC*ASTMSMESVSFLNW
Trigger: CCAGTTTAAGAAGCTGACTGATTCCATGGACATGGTGCTTGCCAAGCAGAATGCACATACCATGAACAAGCATTTATACACCATTGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CAA 90 bp ATTCCAGTCTTTCCGGTATTTAATATCATCGAGGATCTCGCCACTTaGTTTCGCTGTCACATAATCAACTCTGTCATCCACAGGCGTAAA +
Preference number: 6 (lower is better)
Translates to: IPVFPVFNIIEDLAT*FRCHIINSVIHRRK
Trigger: TTTACGCCTGTGGATGACAGAGTTGATTATGTGACAGCGAAACAAAGTGGCGAGATCCTCGATGATATTAAATACCGGAAAGACTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 90 bp TTGATAGTGACTGTGACCACATACAGCACTGTATTTCTCTGCAGCTaGCTGAGTTCAGCTAGATCAGTGATGTTAGTGTTTAGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: LIVTVTTYSTVFLCS*LSSARSVMLVFSCS
Trigger: AGAACAGCTAAACACTAACATCACTGATCTAGCTGAACTCAGCAAGCTGCAGAGAAATACAGTGCTGTATGTGGTCACAGTCACTATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489048.1
CDS CAA 90 bp TCTCATCTCGGGGGTATCCAATACATAGGCAGCTTTGCCTTGTATTaGTTTCCGGAAACTATCAGAATAAAGAACCGAGCTAATGTGCTT +
Preference number: 6 (lower is better)
Translates to: SHLGGIQYIGSFALY*FPETIRIKNRANVL
Trigger: AAGCACATTAGCTCGGTTCTTTATTCTGATAGTTTCCGGAAACAAATACAAGGCAAAGCTGCCTATGTATTGGATACCCCCGAGATGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498015.2
CDS TCA 72 bp TTACTCTGGAGAGTAAAATATCCGGTGTGTCAGGCATaGCATGAATGGTGGTCTTGTCCTTGTTCCATTTTT +
Preference number: 6 (lower is better)
Translates to: LLWRVKYPVCQA*HEWWSCPCSIF
Trigger: AAAAATGGAACAAGGACAAGACCACCATTCATGTCATGCCTGACACACCGGATATTTTACTCTCCAGAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS TCA 72 bp TTGTGCAGCCTGCTTTGTGTAATGAATAAACTTCCTTaGTGCAATAGAGCTCAGGAAGTTCCTACAGGTCAA +
Preference number: 6 (lower is better)
Translates to: LCSLLCVMNKLP*CNRAQEVPTGQ
Trigger: TTGACCTGTAGGAACTTCCTGAGCTCTATTGCATCAAGGAAGTTTATTCATTACACAAAGCAGGCTGCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497809.1
CDS GCA 72 bp GTCTCATCTCGGGGGTATCCAATACATAGGCAGCTTTaGCTTGTATTTGTTTCCGGAAACTATCAGAATAAA +
Preference number: 6 (lower is better)
Translates to: VSSRGYPIHRQL*LVFVSGNYQNK
Trigger: TTTATTCTGATAGTTTCCGGAAACAAATACAAGGCAAAGCTGCCTATGTATTGGATACCCCCGAGATGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
ENST00000497809.1
ENST00000498015.2
CDS GCA 72 bp CAAATCATAGCCCTTGGCAATGGTTTTCTTCCAATCTaGTTTATAATGAGCATCACTCATGTTGAGGGCGTT +
Preference number: 6 (lower is better)
Translates to: QIIALGNGFLPI*FIMSITHVEGV
Trigger: AACGCCCTCAACATGAGTGATGCTCATTATAAAGCAGATTGGAAGAAAACCATTGCCAAGGGCTATGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
ENST00000484968.1
CDS CCA 72 bp ATTCATATTCCTGGTCAGCTCAATGTTCATTGCATCTaGAAGGAGGATGTACTTGTGAATCAGGTGCTTGTA +
Preference number: 6 (lower is better)
Translates to: IHIPGQLNVHCI*KEDVLVNQVLV
Trigger: TACAAGCACCTGATTCACAAGTACATCCTCCTTCCAGATGCAATGAACATTGAGCTGACCAGGAATATGAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CAA 72 bp TTTCCGGTATTTAATATCATCGAGGATCTCGCCACTTaGTTTCGCTGTCACATAATCAACTCTGTCATCCAC +
Preference number: 6 (lower is better)
Translates to: FPVFNIIEDLAT*FRCHIINSVIH
Trigger: GTGGATGACAGAGTTGATTATGTGACAGCGAAACAAAGTGGCGAGATCCTCGATGATATTAAATACCGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS CAA 72 bp TCTTTGACCACTCAATCTAAAGTGCCCATCCAGTTCTaGATGTCATCCCACTTTAATTCTGTAGCACCATTC +
Preference number: 6 (lower is better)
Translates to: SLTTQSKVPIQF*MSSHFNSVAPF
Trigger: GAATGGTGCTACAGAATTAAAGTGGGATGACATCAAGAACTGGATGGGCACTTTAGATTGAGTGGTCAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489048.1
CDS CAA 72 bp AACCCAGGCTCAGTTACCTGTAATAGTCTCCTGATCTaGGTCATTCCGTTTTTGTTCCATTTCTACCACTTT +
Preference number: 6 (lower is better)
Translates to: NPGSVTCNSLLI*VIPFLFHFYHF
Trigger: AAAGTGGTAGAAATGGAACAAAAACGGAATGACCAAGATCAGGAGACTATTACAGGTAACTGAGCCTGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497809.1
CDS CAA 90 bp TCTCATCTCGGGGGTATCCAATACATAGGCAGCTTTGCCTTGTATTaGTTTCCGGAAACTATCAGAATAAAGAACCGAGCTAATGTTTTC +
Preference number: 6 (lower is better)
Translates to: SHLGGIQYIGSFALY*FPETIRIKNRANVF
Trigger: GAAAACATTAGCTCGGTTCTTTATTCTGATAGTTTCCGGAAACAAATACAAGGCAAAGCTGCCTATGTATTGGATACCCCCGAGATGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397337.6
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
CDS CAA 90 bp GGCTCAGTTACCTGTAATAGTCTCCTGATCTTGGTCATTCCGTTTTaGTTCCATTTCTACCACTTTCCTCTGAATACCTCGGTAGTTAAT +
Preference number: 6 (lower is better)
Translates to: GSVTCNSLLILVIPF*FHFYHFPLNTSVVN
Trigger: ATTAACTACCGAGGTATTCAGAGGAAAGTGGTAGAAATGGAACAAAAACGGAATGACCAAGATCAGGAGACTATTACAGGTAACTGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497809.1
CDS CAA 90 bp TGCTTTATAATGAGCATCACTCATGTTGAGGGCGTTGACTTTGGCTaGAATAAACTGAGGCAATTCAGGGTCAATAGTATACTTGTGCTT +
Preference number: 6 (lower is better)
Translates to: CFIMSITHVEGVDFG*NKLRQFRVNSILVL
Trigger: AAGCACAAGTATACTATTGACCCTGAATTGCCTCAGTTTATTCAAGCCAAAGTCAACGCCCTCAACATGAGTGATGCTCATTATAAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
ENST00000484968.1
CDS CAA 90 bp CTGAGTTCAGCTAGATCAGTGATGTTAGTGTTTAGCTGTTCTTTATaGGGACACAAAATATTAAGATGCTCAGAAAAGTGGCACACGAGC +
Preference number: 6 (lower is better)
Translates to: LSSARSVMLVFSCSL*GHKILRCSEKWHTS
Trigger: GCTCGTGTGCCACTTTTCTGAGCATCTTAATATTTTGTGTCCCAATAAAGAACAGCTAAACACTAACATCACTGATCTAGCTGAACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489048.1
CDS CCA 72 bp TATGGAATCCATAAGGCTGGAAAACTTAAATTGATCTaGGTGCTGACGGTAAACATGGTCACTCAAAATCTG +
Preference number: 6 (lower is better)
Translates to: YGIHKAGKLKLI*VLTVNMVTQNL
Trigger: CAGATTTTGAGTGACCATGTTTACCGTCAGCACCCAGATCAATTTAAGTTTTCCAGCCTTATGGATTCCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CCA 72 bp CCACATATGCGAATTGTAGAGAGCAGTCAACATATCTaGACGCAGAATTTCATTACATCCATGTTGCAGAAA +
Preference number: 6 (lower is better)
Translates to: PHMRIVESSQHI*TQNFITSMLQK
Trigger: TTTCTGCAACATGGATGTAATGAAATTCTGCGTCCAGATATGTTGACTGCTCTCTACAATTCGCATATGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397345.8
ENST00000420924.1
CDS CAA 72 bp CTCATACTTCTTCTTGTACTGGTAAGAACTGGCAAGTaGGCTTGTATTCAGGACATGATTCATGATCAGAGA +
Preference number: 6 (lower is better)
Translates to: LILLLVLVRTGK*ACIQDMIHDQR
Trigger: TCTCTGATCATGAATCATGTCCTGAATACAAGCCAACTTGCCAGTTCTTACCAGTACAAGAAGAAGTATGAG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
ENST00000434685.5
ENST00000483418.1
CDS GCA 72 bp ATAAAGTCTATCACTCCTATTTTTGGCATTTGTCTTTaGCAGAACTATATCCATGGCATCAGGAATGCTGGT +
Preference number: 6 (lower is better)
Translates to: IKSITPIFGICL*QNYIHGIRNAG
Trigger: ACCAGCATTCCTGATGCCATGGATATAGTTCTGGCAAAGACAAATGCCAAAAATAGGAGTGATAGACTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CAA 72 bp TATAAAGTCTATCACTCCTATTTTTGGCATTTGTCTTaGCCAGAACTATATCCATGGCATCAGGAATGCTGG +
Preference number: 6 (lower is better)
Translates to: YKVYHSYFWHLS*PELYPWHQECW
Trigger: CCAGCATTCCTGATGCCATGGATATAGTTCTGGCAAAGACAAATGCCAAAAATAGGAGTGATAGACTTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CAA 90 bp CTTAGACTTTCTTTGACCACTCAATCTAAAGTGCCCATCCAGTTCTaGATGTCATCCCACTTTAATTCTGTAGCACCATTCTATATTAGT +
Preference number: 6 (lower is better)
Translates to: LRLSLTTQSKVPIQF*MSSHFNSVAPFYIS
Trigger: ACTAATATAGAATGGTGCTACAGAATTAAAGTGGGATGACATCAAGAACTGGATGGGCACTTTAGATTGAGTGGTCAAAGAAAGTCTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489048.1
CDS TCA 72 bp AACCACAGAAGTGAAATTGGCTTTCTCCATTTCTGCTaGTTGCTTATACTTAATCTGACTGGCAATATCAGT +
Preference number: 6 (lower is better)
Translates to: NHRSEIGFLHFC*LLILNLTGNIS
Trigger: ACTGATATTGCCAGTCAGATTAAGTATAAGCAATCAGCAGAAATGGAGAAAGCCAATTTCACTTCTGTGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000424585.1
ENST00000427231.7
ENST00000434685.5
CDS CAA 72 bp GTTATACTCGTCTTTATACACATTATCACTCTGAATTaGATTGACATTCCTCGTATGCTCAAGACTCATGGC +
Preference number: 6 (lower is better)
Translates to: VILVFIHIITLN*IDIPRMLKTHG
Trigger: GCCATGAGTCTTGAGCATACGAGGAATGTCAATCAAATTCAGAGTGATAATGTGTATAAAGACGAGTATAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS CAA 72 bp GCACGTGATTCATCATGTCATTGGGGATATGAACATTaGCTTTGGTATCCTCATAATGTTTTCTGTAGTTCA +
Preference number: 6 (lower is better)
Translates to: ARDSSCHWGYEH*LWYPHNVFCSS
Trigger: TGAACTACAGAAAACATTATGAGGATACCAAAGCAAATGTTCATATCCCCAATGACATGATGAATCACGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000413693.5
ENST00000427231.7
CDS TCA 72 bp TTTGCATGTTCAATATCCTTTGCTTTTTCATCTACGTaGCATATAGTCTTAGCAACATCACCATCCATTCGA +
Preference number: 6 (lower is better)
Translates to: FACSISFAFSST*HIVLATSPSIR
Trigger: TCGAATGGATGGTGATGTTGCTAAGACTATATGTCACGTAGATGAAAAAGCAAAGGATATTGAACATGCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7
CDS GCA 72 bp ACTAGATTTATATTTTCTCTCATTCATCAATTGAGTTaGATACTTGAAATGCCTATTGATCGGAGAGTCGGC +
Preference number: 6 (lower is better)
Translates to: TRFIFSLIHQLS*ILEMPIDRRVG
Trigger: GCCGACTCTCCGATCAATAGGCATTTCAAGTATGCAACTCAATTGATGAATGAGAGAAAATATAAATCTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397345.8
ENST00000420924.1
CDS CCA 72 bp GCAAACATCCAAATTATTCCTGGACATCAATCAATTTaGGAATTGGGGAATAGTAGAAACACAAATGCCAAA +
Preference number: 6 (lower is better)
Translates to: ANIQIIPGHQSI*ELGNSRNTNAK
Trigger: TTTGGCATTTGTGTTTCTACTATTCCCCAATTCCCAAATTGATTGATGTCCAGGAATAATTTGGATGTTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483418.1
CDS CAA 72 bp TATAGTAGGACAAACTGTATCTTTCACTTACCTATCTaGAGAAGGATGTACTACTCTCTAGGACTTAGCTAT +
Preference number: 6 (lower is better)
Translates to: YSRTNCIFHLPI*RRMYYSLGLSY
Trigger: ATAGCTAAGTCCTAGAGAGTAGTACATCCTTCTCAAGATAGGTAAGTGAAAGATACAGTTTGTCCTACTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489048.1
CDS GCA 72 bp AAGTTTGTAGAGTTTATCACTCATATTAATTGCATTTaGCTTTGCCAAAATAATCTGGGGGATATCAGGCAT +
Preference number: 6 (lower is better)
Translates to: KFVEFITHINCI*LCQNNLGDIRH
Trigger: ATGCCTGATATCCCCCAGATTATTTTGGCAAAGGCAAATGCAATTAATATGAGTGATAAACTCTACAAACTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397345.8
ENST00000409198.5
ENST00000427231.7