RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NEAT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000245532

Ensembl transcript IDs: ENST00000499732.3, ENST00000501122.2, ENST00000601801.3, ENST00000612303.2, ENST00000616315.2, ENST00000642367.1, ENST00000645023.1, ENST00000646243.1, ENST00000670617.1

Found 237 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GGCTTCGCACCCAGACCTGGACGCTCCACCAGGCTGGGCCCGGCCTaGGCCCCGTCCCAGGCCGAGCGAAAATTACATACCACCCTGGGC +
Preference number: 5 (lower is better)
Translates to: GFAPRPGRSTRLGPA*APSQAERKLHTTLG
Trigger: GCCCAGGGTGGTATGTAATTTTCGCTCGGCCTGGGACGGGGCCCAGGCCGGGCCCAGCCTGGTGGAGCGTCCAGGTCTGGGTGCGAAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000501122.2
ENST00000601801.3
ENST00000645023.1
CDS GCA 90 bp GCGTGGCCACAGCGGGCTGAGGGCATGGTGGGGCTAGAGCAAGACTaGCTCACACCCTCGACTGTGCAGCCACCCTCCACCTCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: AWPQRAEGMVGLEQD*LTPSTVQPPSTSPL
Trigger: AAGAGGGGAGGTGGAGGGTGGCTGCACAGTCGAGGGTGTGAGGCAGTCTTGCTCTAGCCCCACCATGCCCTCAGCCCGCTGTGGCCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp CTTCCTCCTTCCACACAGACCAGCGCACCCGGGCTCGCTCAGCTATaGAAGAGCGGCGCCCTCCCAGAGGTCAAGTTCCCCCTCCACCAG +
Preference number: 5 (lower is better)
Translates to: LPPSTQTSAPGLAQL*KSGALPEVKFPLHQ
Trigger: CTGGTGGAGGGGGAACTTGACCTCTGGGAGGGCGCCGCTCTTGCATAGCTGAGCGAGCCCGGGTGCGCTGGTCTGTGTGGAAGGAGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000612303.2
ENST00000670617.1
CDS GCA 90 bp GGGTCTGCTGGGCCCCAAGCACCTGAGGTCACGCAGACGCCCGCCTaGCTCGCCTTCCATTCTCTGATCTGTCAGCCACCGTCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: GSAGPQAPEVTQTPA*LAFHSLICQPPSAV
Trigger: CACAGCTGACGGTGGCTGACAGATCAGAGAATGGAAGGCGAGGCAGGCGGGCGTCTGCGTGACCTCAGGTGCTTGGGGCCCAGCAGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp ATGGAAGGCCTTCATGTGCCCTGGGGGTCACGTCCTGAATCCTCATaGTGGCCCCCAGGCCTGGAAGTTGGCCCTGTCCCTGCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: MEGLHVPWGSRPESS*WPPGLEVGPVPASP
Trigger: GGGGCTGGCAGGGACAGGGCCAACTTCCAGGCCTGGGGGCCACCATGAGGATTCAGGACGTGACCCCCAGGGCACATGAAGGCCTTCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp CCTCCCTTACAGACACTGCACGCCCCAGCAATTGAGGAACCAGCGTaGCCACAGCGGGCTGAGGGCATGGTGGGGCTAGAGCAAGACTGC +
Preference number: 5 (lower is better)
Translates to: PPLQTLHAPAIEEPA*PQRAEGMVGLEQDC
Trigger: GCAGTCTTGCTCTAGCCCCACCATGCCCTCAGCCCGCTGTGGCCACGCTGGTTCCTCAATTGCTGGGGCGTGCAGTGTCTGTAAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp GCATGTGGCGGCCCTTTAGAAGACAGAAAGTGTGTGCTTAGCCCCTaGAGCAGCCACGCTGTGCCCAGCGGAGGGCAGGCGCAGACAGCA +
Preference number: 5 (lower is better)
Translates to: ACGGPLEDRKCVLSP*SSHAVPSGGQAQTA
Trigger: TGCTGTCTGCGCCTGCCCTCCGCTGGGCACAGCGTGGCTGCTTCAGGGGCTAAGCACACACTTTCTGTCTTCTAAAGGGCCGCCACATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp GGCCTAGTGGAAATGGTTCTCTGGGTCTGCTGGGCCCCAAGCACCTaGGGTCACGCAGACGCCCGCCTGCCTCGCCTTCCATTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: GLVEMVLWVCWAPST*GHADARLPRLPFSD
Trigger: ATCAGAGAATGGAAGGCGAGGCAGGCGGGCGTCTGCGTGACCTCAGGTGCTTGGGGCCCAGCAGACCCAGAGAACCATTTCCACTAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp CAGGCATCAATTGAGGCGGGCTCTCTCCTCCAGGGTCTCCCCTCCTaGAATGCTAGGACTCACACTGGCCAGGGACTCCATGTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: QASIEAGSLLQGLPS*NARTHTGQGLHVSR
Trigger: CCGGGAGACATGGAGTCCCTGGCCAGTGTGAGTCCTAGCATTGCAGGAGGGGAGACCCTGGAGGAGAGAGCCCGCCTCAATTGATGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000612303.2
ENST00000642367.1
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS TCA 90 bp CAGTCCCCGCCTGTCAAACATGCTAGGTGCCGCACCAGTCACCGGTaGGGATGGCGCCTTAACTCCACATCACTCCTCAGACCACCCCTC +
Preference number: 5 (lower is better)
Translates to: QSPPVKHARCRTSHR*GWRLNSTSLLRPPL
Trigger: GAGGGGTGGTCTGAGGAGTGATGTGGAGTTAAGGCGCCATCCTCACCGGTGACTGGTGCGGCACCTAGCATGTTTGACAGGCGGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000501122.2
ENST00000601801.3
ENST00000645023.1
CDS TCA 90 bp CACCTGAGGTCACGCAGACGCCCGCCTGCCTCGCCTTCCATTCTCTaGTCTGTCAGCCACCGTCAGCTGTGGATTCCTTCCTGGGAACTG +
Preference number: 5 (lower is better)
Translates to: HLRSRRRPPASPSIL*SVSHRQLWIPSWEL
Trigger: CAGTTCCCAGGAAGGAATCCACAGCTGACGGTGGCTGACAGATCAGAGAATGGAAGGCGAGGCAGGCGGGCGTCTGCGTGACCTCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp CACACACACAGTCTGAGGACTACCAGGTGGGCTCCGAGCCAGGTCTaGAGGCCTCAGACCTCTCAAAGGGGTGGGGAATGTGTTGGGCCA +
Preference number: 5 (lower is better)
Translates to: HTHSLRTTRWAPSQV*RPQTSQRGGECVGP
Trigger: TGGCCCAACACATTCCCCACCCCTTTGAGAGGTCTGAGGCCTGCAGACCTGGCTCGGAGCCCACCTGGTAGTCCTCAGACTGTGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp AAGAATGTGGCCCCAGCCCCTGGATTGGAGTGGAGGCAAGGAGGGTaGCGAGCTGTCTTCAGCAGTCGGCCTCACCTCTCTGCTCCTGTA +
Preference number: 5 (lower is better)
Translates to: KNVAPAPGLEWRQGG*RAVFSSRPHLSAPV
Trigger: TACAGGAGCAGAGAGGTGAGGCCGACTGCTGAAGACAGCTCGCCACCCTCCTTGCCTCCACTCCAATCCAGGGGCTGGGGCCACATTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp AGCAGCAGCGTGAAGGCGAGGCTGTCAGCTGAATGCCTGTGTCTCTaGGGACCAGCTCAGGCTCTGGCCATGGGGGATGTTGATGGAGTG +
Preference number: 5 (lower is better)
Translates to: SSSVKARLSAECLCL*GPAQALAMGDVDGV
Trigger: CACTCCATCAACATCCCCCATGGCCAGAGCCTGAGCTGGTCCCCAGAGACACAGGCATTCAGCTGACAGCCTCGCCTTCACGCTGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp CCTGCCTTCCTGATCATTTCCAGGGCTGCTGCGGCCTATTCCTCCTaGCTCCTCCACCCCTTCTACCTCTCCCTGCCTTCCTCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: PAFLIISRAAAAYSS*LLHPFYLSLPSSFH
Trigger: GTGGAAGGAGGAAGGCAGGGAGAGGTAGAAGGGGTGGAGGAGTCAGGAGGAATAGGCCGCAGCAGCCCTGGAAATGATCAGGAAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000612303.2
ENST00000645023.1
ENST00000670617.1
CDS CCA 90 bp TTTAAAAGAGAGGAAAGGCAGTGCAGGGCTGGAGGTCCTGGAGGGTaGCGGCGGGTCGTCCTAACTAGCAGGCTGAAAGGTGCTGGAGGG +
Preference number: 5 (lower is better)
Translates to: FKREERQCRAGGPGG*RRVVLTSRLKGAGG
Trigger: CCCTCCAGCACCTTTCAGCCTGCTAGTTAGGACGACCCGCCGCCACCCTCCAGGACCTCCAGCCCTGCACTGCCTTTCCTCTCTTTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp GGTGCCTCGCTGTGTACAATGTTCTGCTCCCTGTGCCCCTATGAGTaGCCCTATGAGGTAAGAGCCAGAGCCGGGCTCACACCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: GASLCTMFCSLCPYE*PYEVRARAGLTPEL
Trigger: GAGCTCAGGTGTGAGCCCGGCTCTGGCTCTTACCTCATAGGGTCACTCATAGGGGCACAGGGAGCAGAACATTGTACACAGCGAGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp TTAAATACAGATGGAAGGCCTTCATGTGCCCTGGGGGTCACGTCCTaGATCCTCATGGTGGCCCCCAGGCCTGGAAGTTGGCCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: LNTDGRPSCALGVTS*ILMVAPRPGSWPCP
Trigger: GGGACAGGGCCAACTTCCAGGCCTGGGGGCCACCATGAGGATTCAGGACGTGACCCCCAGGGCACATGAAGGCCTTCCATCTGTATTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp AGGACAGGGCTCTCTGGCCACAGGAGGTGGGTTCTGAGAGCACCATaGCCCTCCTCACACAAACACAGATTCCACAACACACACCACGGG +
Preference number: 5 (lower is better)
Translates to: RTGLSGHRRWVLRAP*PSSHKHRFHNTHHG
Trigger: CCCGTGGTGTGTGTTGTGGAATCTGTGTTTGTGTGAGGAGGGGCATGGTGCTCTCAGAACCCACCTCCTGTGGCCAGAGAGCCCTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp AGGAGCATGAAGTCAGACCAGCAAACTGAACACGAGGCACAGTCCTaGATGCTCTGGGACCGAGCACTGAGGGGGCCCACAGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: RSMKSDQQTEHEAQS*MLWDRALRGPTGEK
Trigger: CTTCTCACCTGTGGGCCCCCTCAGTGCTCGGTCCCAGAGCATGCAGGACTGTGCCTCGTGTTCAGTTTGCTGGTCTGACTTCATGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp CACACACACACACACACACACACACACAGTCTGAGGACTACCAGGTaGGCTCCGAGCCAGGTCTGCAGGCCTCAGACCTCTCAAAGGGGT +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHSLRTTR*APSQVCRPQTSQRG
Trigger: ACCCCTTTGAGAGGTCTGAGGCCTGCAGACCTGGCTCGGAGCCCACCTGGTAGTCCTCAGACTGTGTGTGTGTGTGTGTGTGTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp CACACACACACACACACACACACACACACACACACACACACAGTCTaGGGACTACCAGGTGGGCTCCGAGCCAGGTCTGCAGGCCTCAGA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHTHTHTV*GLPGGLRARSAGLR
Trigger: TCTGAGGCCTGCAGACCTGGCTCGGAGCCCACCTGGTAGTCCTCAGACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp TTGGTCTTCCTGATCATTTCCAGGGCTGCTGCGGCCTATTCCTCCTaGCTCCTCCACCCCTTCTACCTCTCCCTGCCTTCCTCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: LVFLIISRAAAAYSS*LLHPFYLSLPSSFH
Trigger: GTGGAAGGAGGAAGGCAGGGAGAGGTAGAAGGGGTGGAGGAGTCAGGAGGAATAGGCCGCAGCAGCCCTGGAAATGATCAGGAAGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601801.3
CDS GCA 90 bp CTGTTACCCTTTGCTGGGCACCCCACATGCCTGCTAGGCTCTCGCTaGCCACACGAAACCTTACATCTTCCTCGGATGGCATCAGTAGCC +
Preference number: 5 (lower is better)
Translates to: LLPFAGHPTCLLGSR*PHETLHLPRMASVA
Trigger: GGCTACTGATGCCATCCGAGGAAGATGTAAGGTTTCGTGTGGGCAGCGAGAGCCTAGCAGGCATGTGGGGTGCCCAGCAAAGGGTAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp AAGTTCCAGCAGGCTGTGGACAGCAGGAATAGGCTGTTGAGGGGTTaGGCACAGGGTCAGGTGCTGGACACTAGAACAGGACTCCACTCC +
Preference number: 5 (lower is better)
Translates to: KFQQAVDSRNRLLRG*AQGQVLDTRTGLHS
Trigger: GGAGTGGAGTCCTGTTCTAGTGTCCAGCACCTGACCCTGTGCCCAACCCCTCAACAGCCTATTCCTGCTGTCCACAGCCTGCTGGAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp AGCACAGGGCCCCACCAGCCTTTCTCCTGTCACTTGACTCTAACCTaGAGTCCAAGTCACCAGGGCCCCAGGACCCAAAGGTACACAAAG +
Preference number: 5 (lower is better)
Translates to: STGPHQPFSCHLTLT*SPSHQGPRTQRYTK
Trigger: CTTTGTGTACCTTTGGGTCCTGGGGCCCTGGTGACTTGGACTCCAGGTTAGAGTCAAGTGACAGGAGAAAGGCTGGTGGGGCCCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp ACCAGGGGCCCATTCAGGAAACATCAGCCTGCCCTCAAGGTCTTCTaGATTGAACCCTGCCACTGTGACAACCACCCTCACAGGACAGGG +
Preference number: 5 (lower is better)
Translates to: TRGPFRKHQPALKVF*IEPCHCDNHPHRTG
Trigger: CCCTGTCCTGTGAGGGTGGTTGTCACAGTGGCAGGGTTCAATTCAGAAGACCTTGAGGGCAGGCTGATGTTTCCTGAATGGGCCCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp TCCTTCATAGCCTGGCAGCTTTGCTCCTGCCTTCGCAGACAGGAATaGTGTCCTTCCAGCTTCTCCTACCCTTCGGGTCAGAGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: SFIAWQLCSCLRRQE*CPSSFSYPSGQSPK
Trigger: CTTTGGGCTCTGACCCGAAGGGTAGGAGAAGCTGGAAGGACAGCATTCCTGTCTGCGAAGGCAGGAGCAAAGCTGCCAGGCTATGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp CCTGATCTGAGGATAAATGAAGGCAAAGAATGTGGCCCCAGCCCCTaGATTGGAGTGGAGGCAAGGAGGGTGGCGAGCTGTCTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: PDLRINEGKECGPSP*IGVEARRVASCLQQ
Trigger: CTGCTGAAGACAGCTCGCCACCCTCCTTGCCTCCACTCCAATCCAGGGGCTGGGGCCACATTCTTTGCCTTCATTTATCCTCAGATCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp CTTCTCCGAGAAACGCACAAGAAGGCAGGCAAACAGGTGGGTAGGTaGGAGGTCACGGGGCTCCATCTGCAAGCTCCATCTACAAGGCAT +
Preference number: 5 (lower is better)
Translates to: LLRETHKKAGKQVGR*EVTGLHLQAPSTRH
Trigger: ATGCCTTGTAGATGGAGCTTGCAGATGGAGCCCCGTGACCTCTCACCTACCCACCTGTTTGCCTGCCTTCTTGTGCGTTTCTCGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000642367.1
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS TCA 90 bp CCCAGTTCAGCCCTTATCTCCCCTTCTCAGGCAAACAGGCCCAGGTaGGTAGAACAAGCCTCCCTTGCTGCTCCCTTTGAAACAAGCACC +
Preference number: 5 (lower is better)
Translates to: PSSALISPSQANRPR*VEQASLAAPFETST
Trigger: GGTGCTTGTTTCAAAGGGAGCAGCAAGGGAGGCTTGTTCTACTCACCTGGGCCTGTTTGCCTGAGAAGGGGAGATAAGGGCTGAACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp GACCCTGGATTCTGCACACAGCAGTGCCCCATCTTGGAGATGCCATaGGCACAGACAGAAGGTTTACTAGGTGGGCGGCACAGTGACTTC +
Preference number: 5 (lower is better)
Translates to: DPGFCTQQCPILEMP*AQTEGLLGGRHSDF
Trigger: GAAGTCACTGTGCCGCCCACCTAGTAAACCTTCTGTCTGTGCTCATGGCATCTCCAAGATGGGGCACTGCTGTGTGCAGAATCCAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp CACAAAACAGTGTCACCAACCAGATGTGCCAAGAGCCAGAGCAGGTaGAGACACCTACAGATGCTGCCTCCTCTGGACACTGCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: HKTVSPTRCAKSQSR*RHLQMLPPLDTASG
Trigger: CCCAGAGGCAGTGTCCAGAGGAGGCAGCATCTGTAGGTGTCTTCACCTGCTCTGGCTCTTGGCACATCTGGTTGGTGACACTGTTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp CATGTGTGCACACCTTTAGGTCTGCACTGTCAACACCAGACACAGTaGAGCCCAAGCAGCAAGCAGTCCACAGACGGGGGCGTTAGTGTC +
Preference number: 5 (lower is better)
Translates to: HVCTPLGLHCQHQTQ*SPSSKQSTDGGVSV
Trigger: GACACTAACGCCCCCGTCTGTGGACTGCTTGCTGCTTGGGCTTCACTGTGTCTGGTGTTGACAGTGCAGACCTAAAGGTGTGCACACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp CACATGCATATCCTGCCCAAGGAGCATGAAGTCAGACCAGCAAACTaGACACGAGGCACAGTCCTGCATGCTCTGGGACCGAGCACTGAG +
Preference number: 5 (lower is better)
Translates to: HMHILPKEHEVRPAN*TRGTVLHALGPSTE
Trigger: CTCAGTGCTCGGTCCCAGAGCATGCAGGACTGTGCCTCGTGTTCAGTTTGCTGGTCTGACTTCATGCTCCTTGGGCAGGATATGCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp CATTTTTGTAACTTTCAGCTGGATGGCTGCAGGCCCACCCAAGGGTaGACATTCACTCCCCACCCTCTCTGCAGGCAAGCAACACCGATC +
Preference number: 5 (lower is better)
Translates to: HFCNFQLDGCRPTQG*TFTPHPLCRQATPI
Trigger: GATCGGTGTTGCTTGCCTGCAGAGAGGGTGGGGAGTGAATGTGCACCCTTGGGTGGGCCTGCAGCCATCCAGCTGAAAGTTACAAAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS GCA 90 bp GATCCACCCACCTTGGCCTCCCAATCTTATTTGCTTTACAAGTCCTaGTTCAGGGTTACCTTCCCTGACCACTGCTGCCTCCCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: DPPTLASQSYLLYKS*FRVTFPDHCCLPPS
Trigger: GCTGGGAGGGAGGCAGCAGTGGTCAGGGAAGGTAACCCTGAAGCAGGACTTGTAAAGCAAATAAGATTGGGAGGCCAAGGTGGGTGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp TCAAAACTCTGTGGAATGAGGCAACAACTGTCCACTGTTACCCTTTaGTGGGCACCCCACATGCCTGCTAGGCTCTCGCTGCCCACACGA +
Preference number: 5 (lower is better)
Translates to: SKLCGMRQQLSTVTL*WAPHMPARLSLPTR
Trigger: TCGTGTGGGCAGCGAGAGCCTAGCAGGCATGTGGGGTGCCCAGCAAAGGGTAACAGTGGACAGTTGTTGCCTCATTCCACAGAGTTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp CTTCAGGCTCCAGCCATTTCCTTCATAGCCTGGCAGCTTTGCTCCTaGCTTCGCAGACAGGAATGCTGTCCTTCCAGCTTCTCCTACCCT +
Preference number: 5 (lower is better)
Translates to: LQAPAISFIAWQLCS*LRRQECCPSSFSYP
Trigger: AGGGTAGGAGAAGCTGGAAGGACAGCATTCCTGTCTGCGAAGGCAGGAGCAAAGCTGCCAGGCTATGAAGGAAATGGCTGGAGCCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp AAGCGAGCTACGCGGGGAAACGTGCCACTGGCTTCCAGGAACCACTaGACTCAGCCAATGAGCAGAAGTAAAAACAGTGGTGTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: KRATRGNVPLASRNH*TQPMSRSKNSGVGR
Trigger: CCTGCCAACACCACTGTTTTTACTTCTGCTCATTGGCTGAGTGCAGTGGTTCCTGGAAGCCAGTGGCACGTTTCCCCGCGTAGCTCGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp TGCTGCAATGCAGGCATAAGCAGAGGACAAAGCCACAGTGTGACCTaGGTGCAGAGCACTGGGTTGGGCATCACCAGCAGACACATGACA +
Preference number: 5 (lower is better)
Translates to: CCNAGISRGQSHSVT*VQSTGLGITSRHMT
Trigger: TGTCATGTGTCTGCTGGTGATGCCCAACCCAGTGCTCTGCACCCAGGTCACACTGTGGCTTTGTCCTCTGCTTATGCCTGCATTGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp TTCCGGGTACACAGAACTTCCCAGTGGGAAGAGCTAGCCACACAGTaGCAGAAGCTTGGAAAACAACCCATCCCAGCCCTACGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: FRVHRTSQWEELATQ*QKLGKQPIPALRSL
Trigger: CAGAGAGCGTAGGGCTGGGATGGGTTGTTTTCCAAGCTTCTGCCACTGTGTGGCTAGCTCTTCCCACTGGGAAGTTCTGTGTACCCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp AAACTCTGTGGAATGAGGCAACAACTGTCCACTGTTACCCTTTGCTaGGCACCCCACATGCCTGCTAGGCTCTCGCTGCCCACACGAAAC +
Preference number: 5 (lower is better)
Translates to: KLCGMRQQLSTVTLC*APHMPARLSLPTRN
Trigger: GTTTCGTGTGGGCAGCGAGAGCCTAGCAGGCATGTGGGGTGCCCAGCAAAGGGTAACAGTGGACAGTTGTTGCCTCATTCCACAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp GCAGTGCAAGGACAGAACAGTCCCACCCAGGAGACAGAGGCAGTTTaGAAGCCAAGATGTATCCTCCAGATTCCACGTGATCCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: AVQGQNSPTQETEAV*KPRCILQIPRDPAH
Trigger: GTGAGCAGGATCACGTGGAATCTGGAGGATACATCTTGGCTTGCAAACTGCCTCTGTCTCCTGGGTGGGACTGTTCTGTCCTTGCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp GCCCCAGCTGGTGTTACAAGACCCTCCGTGCCATGCAGCCTGCAGTaGAGAGGGTTGGGAACTTGTCTAGATATTTCCCATCATAAAGGG +
Preference number: 5 (lower is better)
Translates to: APAGVTRPSVPCSLQ*RGLGTCLDISHHKG
Trigger: CCCTTTATGATGGGAAATATCTAGACAAGTTCCCAACCCTCTGCACTGCAGGCTGCATGGCACGGAGGGTCTTGTAACACCAGCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp CCCCTCACAGCCTCGCTTCAACTTCAGCCTCCAAACACACTATGGTaGGGGCACTTACTTACTGCAGCAGCAGAGAGGAAACATTCACGG +
Preference number: 5 (lower is better)
Translates to: PLTASLQLQPPNTLW*GHLLTAAAERKHSR
Trigger: CCGTGAATGTTTCCTCTCTGCTGCTGCAGTAAGTAAGTGCCCGCACCATAGTGTGTTTGGAGGCTGAAGTTGAAGCGAGGCTGTGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp GCTAAGAACTTCTCCGAGAAACGCACAAGAAGGCAGGCAAACAGGTaGGTAGGTGAGAGGTCACGGGGCTCCATCTGCAAGCTCCATCTA +
Preference number: 5 (lower is better)
Translates to: AKNFSEKRTRRQANR*VGERSRGSICKLHL
Trigger: TAGATGGAGCTTGCAGATGGAGCCCCGTGACCTCTCACCTACCCACCTGTTTGCCTGCCTTCTTGTGCGTTTCTCGGAGAAGTTCTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000642367.1
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS CCA 90 bp GTGGTGTACCCACGCCTGTACAGCTTTACACATACACAGGTTCTCTaGAAAGAAACTGCAGCAACTGGCCATGACGGTGGCCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: VVYPRLYSFTHTQVL*KETAATGHDGGLCG
Trigger: CCCACAGAGGCCACCGTCATGGCCAGTTGCTGCAGTTTCTTTCCAGAGAACCTGTGTATGTGTAAAGCTGTACAGGCGTGGGTACACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp GAACAGGACTCCACTCCGACATTCCGGGTACACAGAACTTCCCAGTaGGAAGAGCTAGCCACACAGTGGCAGAAGCTTGGAAAACAACCC +
Preference number: 5 (lower is better)
Translates to: EQDSTPTFRVHRTSQ*EELATQWQKLGKQP
Trigger: GGGTTGTTTTCCAAGCTTCTGCCACTGTGTGGCTAGCTCTTCCCACTGGGAAGTTCTGTGTACCCGGAATGTCGGAGTGGAGTCCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp GAATTAATTCAGCGTGTTAGCAACAGAACCCTTGGGTGTGTGCTGTaGGATAAGCGAGCTACGCGGGGAAACGTGCCACTGGCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: ELIQRVSNRTLGCVL*DKRATRGNVPLASR
Trigger: CCTGGAAGCCAGTGGCACGTTTCCCCGCGTAGCTCGCTTATCCCACAGCACACACCCAAGGGTTCTGTTGCTAACACGCTGAATTAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp CAGGGGACATTGTCCCCCAGCTTCACATCCACATGTCTCCTAGCATaGCACATGCATATCCTGCCCAAGGAGCATGAAGTCAGACCAGCA +
Preference number: 5 (lower is better)
Translates to: QGTLSPSFTSTCLLA*HMHILPKEHEVRPA
Trigger: TGCTGGTCTGACTTCATGCTCCTTGGGCAGGATATGCATGTGCCATGCTAGGAGACATGTGGATGTGAAGCTGGGGGACAATGTCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp GTAGAAACAGACCAGACCAGAATATACATGCTGATTCCCGTTACATaGAAGGTCCAGCGCCAGGCGGGCAGGCAGCCAGCCACAGAAAAG +
Preference number: 5 (lower is better)
Translates to: VETDQTRIYMLIPVT*KVQRQAGRQPATEK
Trigger: CTTTTCTGTGGCTGGCTGCCTGCCCGCCTGGCGCTGGACCTTTCATGTAACGGGAATCAGCATGTATATTCTGGTCTGGTCTGTTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp CACATGTCTCCTAGCATGGCACATGCATATCCTGCCCAAGGAGCATaGAGTCAGACCAGCAAACTGAACACGAGGCACAGTCCTGCATGC +
Preference number: 5 (lower is better)
Translates to: HMSPSMAHAYPAQGA*SQTSKLNTRHSPAC
Trigger: GCATGCAGGACTGTGCCTCGTGTTCAGTTTGCTGGTCTGACTTCATGCTCCTTGGGCAGGATATGCATGTGCCATGCTAGGAGACATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp GGTATGCAAAGCTGGACACCCACTCTGGAGGGCAACAGGGCAGAATaGAGAAAAATGTCGGACTCACGCCCTATGACCCAGGAATTTCAC +
Preference number: 5 (lower is better)
Translates to: GMQSWTPTLEGNRAE*RKMSDSRPMTQEFH
Trigger: GTGAAATTCCTGGGTCATAGGGCGTGAGTCCGACATTTTTCTCCATTCTGCCCTGTTGCCCTCCAGAGTGGGTGTCCAGCTTTGCATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp AACAGGCCGTTCCTGCGGTTCTCAGTGCTGCCAACCTGGGCATACTaGAGAGCCTCAACCAATACTGGCTCTCAGGGTACTTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: NRPFLRFSVLPTWAY*RASTNTGSQGTFLF
Trigger: AAAAAGGAAAGTACCCTGAGAGCCAGTATTGGTTGAGGCTCTTCAGTATGCCCAGGTTGGCAGCACTGAGAACCGCAGGAACGGCCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp GTGACTTCTCCCCAGCACTCCACCCGTTTGTCAGTAGTGTACACGTaGAGGGGTCACCAAGATATAACGGCACAGGCAAATAAGACACAG +
Preference number: 5 (lower is better)
Translates to: VTSPQHSTRLSVVYT*RGHQDITAQANKTQ
Trigger: CTGTGTCTTATTTGCCTGTGCCGTTATATCTTGGTGACCCCTCCACGTGTACACTACTGACAAACGGGTGGAGTGCTGGGGAGAAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp ATTCGAACCAGCTCCAGTGCCCTATTAGGTCCAAATCCACTCAGATaGGGAAATGGAGAGTCAGGGACAAGCAACAACCAGGGGCCCATT +
Preference number: 5 (lower is better)
Translates to: IRTSSSALLGPNPLR*GNGESGTSNNQGPI
Trigger: AATGGGCCCCTGGTTGTTGCTTGTCCCTGACTCTCCATTTCCCCATCTGAGTGGATTTGGACCTAATAGGGCACTGGAGCTGGTTCGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp GGGCCAAGGCTCAGCACAGACACTTCTCCAGGGAACATACACATATaGCCAACAGCACCAGCAAAGGTGCTTGATAGCATCACTCATCAG +
Preference number: 5 (lower is better)
Translates to: GPRLSTDTSPGNIHI*PTAPAKVLDSITHQ
Trigger: CTGATGAGTGATGCTATCAAGCACCTTTGCTGGTGCTGTTGGCCATATGTGTATGTTCCCTGGAGAAGTGTCTGTGCTGAGCCTTGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp TCACGGCCATCTAAGTCCCAACCTGCCGATGAAGCAACAAAGCTCTaGCCTTACAAGGCCTCAGAAATGGGGGCAGTCAAAACACACTCT +
Preference number: 5 (lower is better)
Translates to: SRPSKSQPADEATKL*PYKASEMGAVKTHS
Trigger: AGAGTGTGTTTTGACTGCCCCCATTTCTGAGGCCTTGTAAGGCCAGAGCTTTGTTGCTTCATCGGCAGGTTGGGACTTAGATGGCCGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp TCTCCCCTCACAGCCTCGCTTCAACTTCAGCCTCCAAACACACTATaGTGCGGGCACTTACTTACTGCAGCAGCAGAGAGGAAACATTCA +
Preference number: 5 (lower is better)
Translates to: SPLTASLQLQPPNTL*CGHLLTAAAERKHS
Trigger: TGAATGTTTCCTCTCTGCTGCTGCAGTAAGTAAGTGCCCGCACCATAGTGTGTTTGGAGGCTGAAGTTGAAGCGAGGCTGTGAGGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp GCCTGCTGGCATTCATGGGCTCTGGAACAAGCATTTATTCAAAGCTaGTGGCCCCTCGAGCCGGATGCATCTGCTGTGGACTTTTTAAGA +
Preference number: 5 (lower is better)
Translates to: ACWHSWALEQAFIQS*WPLEPDASAVDFLR
Trigger: TCTTAAAAAGTCCACAGCAGATGCATCCGGCTCGAGGGGCCATCAGCTTTGAATAAATGCTTGTTCCAGAGCCCATGAATGCCAGCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000612303.2
ENST00000642367.1
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS TCA 90 bp CCAATCTTATTTGCTTTACAAGTCCTGCTTCAGGGTTACCTTCCCTaGCCACTGCTGCCTCCCTCCCAGCATTTGCCAGGGACTGTCATT +
Preference number: 5 (lower is better)
Translates to: PILFALQVLLQGYLP*PLLPPSQHLPGTVI
Trigger: AATGACAGTCCCTGGCAAATGCTGGGAGGGAGGCAGCAGTGGTCAGGGAAGGTAACCCTGAAGCAGGACTTGTAAAGCAAATAAGATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp AATCTCCTTTTTGTAACAACAGGCCGTTCCTGCGGTTCTCAGTGCTaGCAACCTGGGCATACTGAAGAGCCTCAACCAATACTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: NLLFVTTGRSCGSQC*QPGHTEEPQPILAL
Trigger: GAGAGCCAGTATTGGTTGAGGCTCTTCAGTATGCCCAGGTTGGCAGCACTGAGAACCGCAGGAACGGCCTGTTGTTACAAAAAGGAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp GTCAATCTCCTTTTTGTAACAACAGGCCGTTCCTGCGGTTCTCAGTaGTGCCAACCTGGGCATACTGAAGAGCCTCAACCAATACTGGCT +
Preference number: 5 (lower is better)
Translates to: VNLLFVTTGRSCGSQ*CQPGHTEEPQPILA
Trigger: AGCCAGTATTGGTTGAGGCTCTTCAGTATGCCCAGGTTGGCAGCACTGAGAACCGCAGGAACGGCCTGTTGTTACAAAAAGGAGATTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp CATCTGCTCGCCATGAGGAACACTATAGTAACAAACCACGGTCCATaGAGCATTTTTGTAACTTTCAGCTGGATGGCTGCAGGCCCACCC +
Preference number: 5 (lower is better)
Translates to: HLLAMRNTIVTNHGP*SIFVTFSWMAAGPP
Trigger: GGGTGGGCCTGCAGCCATCCAGCTGAAAGTTACAAAAATGCTTCATGGACCGTGGTTTGTTACTATAGTGTTCCTCATGGCGAGCAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS TCA 90 bp GTTTCAAATCAACCACCTAAGTTGCTAAGGGGCAGCGAAGGATGCTaGTCTGCTGCGTATGCAAGTCTGACGCCCATCTTTCAAGTGACT +
Preference number: 5 (lower is better)
Translates to: VSNQPPKLLRGSEGC*SAAYASLTPIFQVT
Trigger: AGTCACTTGAAAGATGGGCGTCAGACTTGCATACGCAGCAGATCAGCATCCTTCGCTGCCCCTTAGCAACTTAGGTGGTTGATTTGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS TCA 90 bp AGCCTGGGTGAAGGTGTGGGGAAATGTCAATGGGACCAACCTCCTTaGGGTGGAAGCTGGGGGTGTCCATCATATTTAGAAATTTACACA +
Preference number: 5 (lower is better)
Translates to: SLGEGVGKCQWDQPP*GGSWGCPSYLEIYT
Trigger: TGTGTAAATTTCTAAATATGATGGACACCCCCAGCTTCCACCTCAAGGAGGTTGGTCCCATTGACATTTCCCCACACCTTCACCCAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp GCACTACCGGTGTACCCACCATTCCCTTCTCCTAGTAATCTGCAATaGAATCACAATGCCCAAACTAGACCTGCCATTTCTCACACACAG +
Preference number: 5 (lower is better)
Translates to: ALPVYPPFPSPSNLQ*NHNAQTRPAISHTQ
Trigger: CTGTGTGTGAGAAATGGCAGGTCTAGTTTGGGCATTGTGATTGCATTGCAGATTACTAGGAGAAGGGAATGGTGGGTACACCGGTAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000642367.1
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS GCA 90 bp TACCAACTCTCAACAGAGAGCAGATCCCATCCCCACTCAGCAGTCTaGAGACCACTTGGGATAATACCAGTTCTATCTGTGGTTACCATG +
Preference number: 5 (lower is better)
Translates to: YQLSTESRSHPHSAV*RPLGIIPVLSVVTM
Trigger: CATGGTAACCACAGATAGAACTGGTATTATCCCAAGTGGTCTGCAGACTGCTGAGTGGGGATGGGATCTGCTCTCTGTTGAGAGTTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp AGAGGCAGGAGAGTTCACTGTGAGAGCTCAACAAGGAGTAGCTGCTaGCAAACATCTACATTCATTTACCCGCATTTCACAGACACAGGC +
Preference number: 5 (lower is better)
Translates to: RGRRVHCESSTRSSC*QTSTFIYPHFTDTG
Trigger: GCCTGTGTCTGTGAAATGCGGGTAAATGAATGTAGATGTTTGGCAGCAGCTACTCCTTGTTGAGCTCTCACAGTGAACTCTCCTGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp GGCAGAGGCAGGAGAGTTCACTGTGAGAGCTCAACAAGGAGTAGCTaGTGCCAAACATCTACATTCATTTACCCGCATTTCACAGACACA +
Preference number: 5 (lower is better)
Translates to: GRGRRVHCESSTRSS*CQTSTFIYPHFTDT
Trigger: TGTGTCTGTGAAATGCGGGTAAATGAATGTAGATGTTTGGCAGCAGCTACTCCTTGTTGAGCTCTCACAGTGAACTCTCCTGCCTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp AACAGAGAGCAGATCCCATCCCCACTCAGCAGTCTGCAGACCACTTaGGATAATACCAGTTCTATCTGTGGTTACCATGCTCTCCTACAT +
Preference number: 5 (lower is better)
Translates to: NREQIPSPLSSLQTT*DNTSSICGYHALLH
Trigger: ATGTAGGAGAGCATGGTAACCACAGATAGAACTGGTATTATCCCAAGTGGTCTGCAGACTGCTGAGTGGGGATGGGATCTGCTCTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp GGTGCTGGAGGGGATGCCTTCACTCAGAGGAAGTTCACAGCCACCTaGCTTGGAACATGTACCTGTTCATCTTTTCGTAATGTTAGTATT +
Preference number: 5 (lower is better)
Translates to: GAGGDAFTQRKFTAT*LGTCTCSSFRNVSI
Trigger: AATACTAACATTACGAAAAGATGAACAGGTACATGTTCCAAGGCAGGTGGCTGTGAACTTCCTCTGAGTGAAGGCATCCCCTCCAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp GACCCAGGAATTTCACTTCTTGGTACCTACCCTGAGAAACACTCATaGATTGTGCACAAGGGGTTGTGTATGACGATGATCGCACAGAAC +
Preference number: 5 (lower is better)
Translates to: DPGISLLGTYPEKHS*IVHKGLCMTMIAQN
Trigger: GTTCTGTGCGATCATCGTCATACACAACCCCTTGTGCACAATGCATGAGTGTTTCTCAGGGTAGGTACCAAGAAGTGAAATTCCTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp CGGCACATGAGGAGAGGACCAACATTATTCTATTTTGGCAGCACGTaGTTTCAACCCATCTCACAAAACAGTGTCACCAACCAGATGTGC +
Preference number: 5 (lower is better)
Translates to: RHMRRGPTLFYFGST*FQPISQNSVTNQMC
Trigger: GCACATCTGGTTGGTGACACTGTTTTGTGAGATGGGTTGAAAGCACGTGCTGCCAAAATAGAATAATGTTGGTCCTCTCCTCATGTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp CCCAGTTCCACGGCACATGAGGAGAGGACCAACATTATTCTATTTTaGCAGCACGTGCTTTCAACCCATCTCACAAAACAGTGTCACCAA +
Preference number: 5 (lower is better)
Translates to: PSSTAHEERTNIILF*QHVLSTHLTKQCHQ
Trigger: TTGGTGACACTGTTTTGTGAGATGGGTTGAAAGCACGTGCTGCCAAAATAGAATAATGTTGGTCCTCTCCTCATGTGCCGTGGAACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp AGATGTACTAGTAACTCAACAGTCCACAGTGCAAGACAGGCTGTGTaGTGTACCCACGCCTGTACAGCTTTACACATACACAGGTTCTCT +
Preference number: 5 (lower is better)
Translates to: RCTSNSTVHSARQAV*CTHACTALHIHRFS
Trigger: AGAGAACCTGTGTATGTGTAAAGCTGTACAGGCGTGGGTACACCACACAGCCTGTCTTGCACTGTGGACTGTTGAGTTACTAGTACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp AAAGAGCACTACCGGTGTACCCACCATTCCCTTCTCCTAGTAATCTaGAATGCAATCACAATGCCCAAACTAGACCTGCCATTTCTCACA +
Preference number: 5 (lower is better)
Translates to: KEHYRCTHHSLLLVI*NAITMPKLDLPFLT
Trigger: TGTGAGAAATGGCAGGTCTAGTTTGGGCATTGTGATTGCATTGCAGATTACTAGGAGAAGGGAATGGTGGGTACACCGGTAGTGCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000642367.1
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS CCA 90 bp GTGTTGGCAAGAATGCGCAGAAATTGGAACCCTCTTACTTACTGGTaGGAATGTGAAATGGTGCATGGACGTGGGAAAATAGTTTGGCAG +
Preference number: 5 (lower is better)
Translates to: VLARMRRNWNPLTYW*ECEMVHGRGKIVWQ
Trigger: CTGCCAAACTATTTTCCCACGTCCATGCACCATTTCACATTCCCACCAGTAAGTAAGAGGGTTCCAATTTCTGCGCATTCTTGCCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp GGCTCAAGCAATCCTCTTACCTCAGCAACTAGGACTACAGGCACATaGCACCACGCTTGGCCTTCTAATTTATTTCTGTGTCAACAAAAT +
Preference number: 5 (lower is better)
Translates to: GSSNPLTSATRTTGT*HHAWPSNLFLCQQN
Trigger: ATTTTGTTGACACAGAAATAAATTAGAAGGCCAAGCGTGGTGGCATGTGCCTGTAGTCCTAGTTGCTGAGGTAAGAGGATTGCTTGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp CTAGTGTTGGCAAGAATGCGCAGAAATTGGAACCCTCTTACTTACTaGTGGGAATGTGAAATGGTGCATGGACGTGGGAAAATAGTTTGG +
Preference number: 5 (lower is better)
Translates to: LVLARMRRNWNPLTY*WECEMVHGRGKIVW
Trigger: CCAAACTATTTTCCCACGTCCATGCACCATTTCACATTCCCACCAGTAAGTAAGAGGGTTCCAATTTCTGCGCATTCTTGCCAACACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp CAGATCGGATTTGACCAACAAAATGGGGAGGAACTGATCCAGATGTaGAATGTGACAGAGAATCCCTTCCCACTGCCATGGAACATTTAT +
Preference number: 5 (lower is better)
Translates to: QIGFDQQNGEELIQM*NVTENPFPLPWNIY
Trigger: ATAAATGTTCCATGGCAGTGGGAAGGGATTCTCTGTCACATTCCACATCTGGATCAGTTCCTCCCCATTTTGTTGGTCAAATCCGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp TCTATGCAGATCACTTTTATCATTAAAGGCACAAATCTTTTCATCTaGACAGGGAATCTAAGACCTGTGGACACTTCCGGCACCCTGGCC +
Preference number: 5 (lower is better)
Translates to: SMQITFIIKGTNLFI*TGNLRPVDTSGTLA
Trigger: GGCCAGGGTGCCGGAAGTGTCCACAGGTCTTAGATTCCCTGTTCAGATGAAAAGATTTGTGCCTTTAATGATAAAAGTGATCTGCATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp CTCCCCGTCCCCCACAACTCCCACCTCAGGGTCCTCTTACTAGAATaGCAAGAAAGTATTATGAAATCTAACGAAGTAAAGTTCAAGTTT +
Preference number: 5 (lower is better)
Translates to: LPVPHNSHLRVLLLE*QESIMKSNEVKFKF
Trigger: AAACTTGAACTTTACTTCGTTAGATTTCATAATACTTTCTTGGCATTCTAGTAAGAGGACCCTGAGGTGGGAGTTGTGGGGGACGGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000642367.1
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS GCA 90 bp CTTCTCCAGGGAACATACACATATGGCCAACAGCACCAGCAAAGGTaGTTGATAGCATCACTCATCAGAGAAATGCAAATCCAAATGACA +
Preference number: 5 (lower is better)
Translates to: LLQGTYTYGQQHQQR*LIASLIREMQIQMT
Trigger: TGTCATTTGGATTTGCATTTCTCTGATGAGTGATGCTATCAAGCACCTTTGCTGGTGCTGTTGGCCATATGTGTATGTTCCCTGGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp CTAGATATTTCCCATCATAAAGGGACAGGAAACAGCAGCTCCCCTTaGTCACAAGTACCTGCACGATACTATTCATTTCAGTTTCACACA +
Preference number: 5 (lower is better)
Translates to: LDISHHKGTGNSSSP*SQVPARYYSFQFHT
Trigger: TGTGTGAAACTGAAATGAATAGTATCGTGCAGGTACTTGTGAGCAAGGGGAGCTGCTGTTTCCTGTCCCTTTATGATGGGAAATATCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp GTGGGAACCTCGGAACCCTTGTGCACTCTTGGTGAGAACGTAAAATaGTGCAGTTGCTATGAAAAACTACAGTGGTTCCTCAATAAATTA +
Preference number: 5 (lower is better)
Translates to: VGTSEPLCTLGENVK*CSCYEKLQWFLNKL
Trigger: TAATTTATTGAGGAACCACTGTAGTTTTTCATAGCAACTGCACCATTTTACGTTCTCACCAAGAGTGCACAAGGGTTCCGAGGTTCCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp GGCCTTGTCAGCATTAAGCCCATGAATGCTAAATTCACACACAGATaGCAAGAATCTACTGTACCAATTACAGTCTTAGTAGGTCACTGC +
Preference number: 5 (lower is better)
Translates to: GLVSIKPMNAKFTHR*QESTVPITVLVGHC
Trigger: GCAGTGACCTACTAAGACTGTAATTGGTACAGTAGATTCTTGTCATCTGTGTGTGAATTTAGCATTCATGGGCTTAATGCTGACAAGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp TCAAACACGGCTACCACACAGATGTTGAAAAGACCAAGGCAGACATaGATACAGATATGCGGTGCTTACCTAGATGTACTAGTAACTCAA +
Preference number: 5 (lower is better)
Translates to: SNTATTQMLKRPRQT*IQICGAYLDVLVTQ
Trigger: TTGAGTTACTAGTACATCTAGGTAAGCACCGCATATCTGTATTCATGTCTGCCTTGGTCTTTTCAACATCTGTGTGGTAGCCGTGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp ACAGATGTTGAAAAGACCAAGGCAGACATGAATACAGATATGCGGTaGTTACCTAGATGTACTAGTAACTCAACAGTCCACAGTGCAAGA +
Preference number: 5 (lower is better)
Translates to: TDVEKTKADMNTDMR*LPRCTSNSTVHSAR
Trigger: TCTTGCACTGTGGACTGTTGAGTTACTAGTACATCTAGGTAAGCACCGCATATCTGTATTCATGTCTGCCTTGGTCTTTTCAACATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp TGGAAGCTGGGGGTGTCCATCATATTTAGAAATTTACACATGCTGTaGCCAGAATTCCTCCTGAGGAAACTTTTCTCTCACAGATATACT +
Preference number: 5 (lower is better)
Translates to: WKLGVSIIFRNLHML*PEFLLRKLFSHRYT
Trigger: AGTATATCTGTGAGAGAAAAGTTTCCTCAGGAGGAATTCTGGGCACAGCATGTGTAAATTTCTAAATATGATGGACACCCCCAGCTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp ACATTTATACCCCGTGAATCAATTCTTCTTCAGCATGCCAGTTGCTaGAGACAGCACCATTTACATACAGGCATCTATAGCAGTTATCTT +
Preference number: 5 (lower is better)
Translates to: TFIPRESILLQHASC*RQHHLHTGIYSSYL
Trigger: AAGATAACTGCTATAGATGCCTGTATGTAAATGGTGCTGTCTCCAGCAACTGGCATGCTGAAGAAGAATTGATTCACGGGGTATAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp GGGAAGGTTAAGAATCCTGAGAAAAAGCCTCTTCAAATGTGTTTGTaGACTCTGCCGGTACAGGGAAATACTACTGGAAACAAAATTAAG +
Preference number: 5 (lower is better)
Translates to: GKVKNPEKKPLQMCL*TLPVQGNTTGNKIK
Trigger: CTTAATTTTGTTTCCAGTAGTATTTCCCTGTACCGGCAGAGTTCACAAACACATTTGAAGAGGCTTTTTCTCAGGATTCTTAACCTTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 90 bp CCACAATATAGGCATTTACAAGGCTTTTCTAAGACTTCCAGCTCCTaGAAAAATCACACCTTCACAGTTTCAAATCAACCACCTAAGTTG +
Preference number: 5 (lower is better)
Translates to: PQYRHLQGFSKTSSS*KNHTFTVSNQPPKL
Trigger: CAACTTAGGTGGTTGATTTGAAACTGTGAAGGTGTGATTTTTTCAGGAGCTGGAAGTCTTAGAAAAGCCTTGTAAATGCCTATATTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS TCA 90 bp CCATCATATTTAGAAATTTACACATGCTGTGCCCAGAATTCCTCCTaGGGAAACTTTTCTCTCACAGATATACTTGCCCATGTACATAAA +
Preference number: 5 (lower is better)
Translates to: PSYLEIYTCCAQNSS*GNFSLTDILAHVHK
Trigger: TTTATGTACATGGGCAAGTATATCTGTGAGAGAAAAGTTTCCTCAGGAGGAATTCTGGGCACAGCATGTGTAAATTTCTAAATATGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 90 bp AAGTCACAATTGCAAAGATGTGGAACCAACCCATCAACCAGTGAGTaGATAAATAAAATGTGGTATCTCTACACCATGGAATATGACTTA +
Preference number: 5 (lower is better)
Translates to: KSQLQRCGTNPSTSE*INKMWYLYTMEYDL
Trigger: TAAGTCATATTCCATGGTGTAGAGATACCACATTTTATTTATCCACTCACTGGTTGATGGGTTGGTTCCACATCTTTGCAATTGTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp TTAAGAATCCTGAGAAAAAGCCTCTTCAAATGTGTTTGTGAACTCTaGCGGTACAGGGAAATACTACTGGAAACAAAATTAAGTGTAGAA +
Preference number: 5 (lower is better)
Translates to: LRILRKSLFKCVCEL*RYREILLETKLSVE
Trigger: TTCTACACTTAATTTTGTTTCCAGTAGTATTTCCCTGTACCGGCAGAGTTCACAAACACATTTGAAGAGGCTTTTTCTCAGGATTCTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp AGAATATTATTTGGATCTTTTAAAAAGGAAGGAAATTCTGACATATaGTACAACATAGACGCATCTCGAGGACACTGTGCTCAGAGAAAT +
Preference number: 5 (lower is better)
Translates to: RILFGSFKKEGNSDI*YNIDASRGHCAQRN
Trigger: ATTTCTCTGAGCACAGTGTCCTCGAGATGCGTCTATGTTGTAGCATATGTCAGAATTTCCTTCCTTTTTAAAAGATCCAAATAATATTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 90 bp TGTAGTAAAGGCACGATTTACATACTAAATTCCCTTGAAATTCAATaGAATTTCACTTCGCTCATGATTTTCAATCACAAGACACCTGTG +
Preference number: 5 (lower is better)
Translates to: CSKGTIYILNSLEIQ*NFTSLMIFNHKTPV
Trigger: CACAGGTGTCTTGTGATTGAAAATCATGAGCGAAGTGAAATTGCATTGAATTTCAAGGGAATTTAGTATGTAAATCGTGCCTTTACTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616315.2
CDS GCA 72 bp CACGGTCCACAGCACCACTGCTGTTGGCTCAGGCTCTaGCTCCCCTGGGCCCACGGCGGGTCCGTGGGAGCC +
Preference number: 6 (lower is better)
Translates to: HGPQHHCCWLRL*LPWAHGGSVGA
Trigger: GGCTCCCACGGACCCGCCGTGGGCCCAGGGGAGGCAGAGCCTGAGCCAACAGCAGTGGTGCTGTGGACCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp TCCACACAGACCAGCGCACCCGGGCTCGCTCAGCTATaGAAGAGCGGCGCCCTCCCAGAGGTCAAGTTCCCC +
Preference number: 6 (lower is better)
Translates to: STQTSAPGLAQL*KSGALPEVKFP
Trigger: GGGGAACTTGACCTCTGGGAGGGCGCCGCTCTTGCATAGCTGAGCGAGCCCGGGTGCGCTGGTCTGTGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000612303.2
ENST00000670617.1
CDS GCA 72 bp CAGCGGGCTGAGGGCATGGTGGGGCTAGAGCAAGACTaGCTCACACCCTCGACTGTGCAGCCACCCTCCACC +
Preference number: 6 (lower is better)
Translates to: QRAEGMVGLEQD*LTPSTVQPPST
Trigger: GGTGGAGGGTGGCTGCACAGTCGAGGGTGTGAGGCAGTCTTGCTCTAGCCCCACCATGCCCTCAGCCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp GGGCCCCAAGCACCTGAGGTCACGCAGACGCCCGCCTaGCTCGCCTTCCATTCTCTGATCTGTCAGCCACCG +
Preference number: 6 (lower is better)
Translates to: GPQAPEVTQTPA*LAFHSLICQPP
Trigger: CGGTGGCTGACAGATCAGAGAATGGAAGGCGAGGCAGGCGGGCGTCTGCGTGACCTCAGGTGCTTGGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp CATGTGCCCTGGGGGTCACGTCCTGAATCCTCATGGTaGCCCCCAGGCCTGGAAGTTGGCCCTGTCCCTGCC +
Preference number: 6 (lower is better)
Translates to: HVPWGSRPESSW*PPGLEVGPVPA
Trigger: GGCAGGGACAGGGCCAACTTCCAGGCCTGGGGGCCACCATGAGGATTCAGGACGTGACCCCCAGGGCACATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp GAAATGGTTCTCTGGGTCTGCTGGGCCCCAAGCACCTaGGGTCACGCAGACGCCCGCCTGCCTCGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: EMVLWVCWAPST*GHADARLPRLP
Trigger: TGGAAGGCGAGGCAGGCGGGCGTCTGCGTGACCTCAGGTGCTTGGGGCCCAGCAGACCCAGAGAACCATTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp CAGACACTGCACGCCCCAGCAATTGAGGAACCAGCGTaGCCACAGCGGGCTGAGGGCATGGTGGGGCTAGAG +
Preference number: 6 (lower is better)
Translates to: QTLHAPAIEEPA*PQRAEGMVGLE
Trigger: CTCTAGCCCCACCATGCCCTCAGCCCGCTGTGGCCACGCTGGTTCCTCAATTGCTGGGGCGTGCAGTGTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp AAATGCTGGTGCCGGCCCACATGGCCCAGGTGGCAGTaGCAACCTCTCACCCTGGAATGCCCCAGAGGACCC +
Preference number: 6 (lower is better)
Translates to: KCWCRPTWPRWQ*QPLTLECPRGP
Trigger: GGGTCCTCTGGGGCATTCCAGGGTGAGAGGTTGTCACTGCCACCTGGGCCATGTGGGCCGGCACCAGCATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp CTCCACCAGGCAGTAGGGACAGCCTGGCCTGGAGCGTaGCTGTTCTGCCTGGGGGACCCTGCGGATATTTTC +
Preference number: 6 (lower is better)
Translates to: LHQAVGTAWPGA*LFCLGDPADIF
Trigger: GAAAATATCCGCAGGGTCCCCCAGGCAGAACAGCCACGCTCCAGGCCAGGCTGTCCCTACTGCCTGGTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000612303.2
ENST00000670617.1
CDS CAA 72 bp AGGTACACAAAGCCCACCTGGACCCTCAGCCGGTACTaGCCCCAGGCCACCCTCAGGATCCACGGTCCACAG +
Preference number: 6 (lower is better)
Translates to: RYTKPTWTLSRY*PQATLRIHGPQ
Trigger: CTGTGGACCGTGGATCCTGAGGGTGGCCTGGGGCAAGTACCGGCTGAGGGTCCAGGTGGGCTTTGTGTACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp GAACCATCTGGGGCGCAGGGCAGTGAGAGAGCCAAGTaGCTGGCCCTTCCCTCTGGCCAGTGGGGTTGCAAA +
Preference number: 6 (lower is better)
Translates to: EPSGAQGSERAK*LALPSGQWGCK
Trigger: TTTGCAACCCCACTGGCCAGAGGGAAGGGCCAGTCACTTGGCTCTCTCACTGCCCTGCGCCCCAGATGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp TCTTCACCCTCATCCCTCCCAGTACCAGTGCCAAGCTaGATACCCCCATCCCCCACACTGCAACGCCCACGG +
Preference number: 6 (lower is better)
Translates to: SSPSSLPVPVPS*IPPSPTLQRPR
Trigger: CCGTGGGCGTTGCAGTGTGGGGGATGGGGGTATGCAGCTTGGCACTGGTACTGGGAGGGATGAGGGTGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS CCA 72 bp CATCTGGGGCGCAGGGCAGTGAGAGAGCCAAGTGACTaGCCCTTCCCTCTGGCCAGTGGGGTTGCAAACCAA +
Preference number: 6 (lower is better)
Translates to: HLGRRAVREPSD*PFPLASGVANQ
Trigger: TTGGTTTGCAACCCCACTGGCCAGAGGGAAGGGCCAGTCACTTGGCTCTCTCACTGCCCTGCGCCCCAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp GAGCCAGGTCTGCAGGCCTCAGACCTCTCAAAGGGGTaGGGAATGTGTTGGGCCAACTGCCTTTGCCCCCTC +
Preference number: 6 (lower is better)
Translates to: EPGLQASDLSKG*GMCWANCLCPL
Trigger: GAGGGGGCAAAGGCAGTTGGCCCAACACATTCCCCACCCCTTTGAGAGGTCTGAGGCCTGCAGACCTGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp AGTAGCCTCCCTTACAGACACTGCACGCCCCAGCAATaGAGGAACCAGCGTGGCCACAGCGGGCTGAGGGCA +
Preference number: 6 (lower is better)
Translates to: SSLPYRHCTPQQ*RNQRGHSGLRA
Trigger: TGCCCTCAGCCCGCTGTGGCCACGCTGGTTCCTCAATTGCTGGGGCGTGCAGTGTCTGTAAGGGAGGCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp TCACGCAGACGCCCGCCTGCCTCGCCTTCCATTCTCTaGTCTGTCAGCCACCGTCAGCTGTGGATTCCTTCC +
Preference number: 6 (lower is better)
Translates to: SRRRPPASPSIL*SVSHRQLWIPS
Trigger: GGAAGGAATCCACAGCTGACGGTGGCTGACAGATCAGAGAATGGAAGGCGAGGCAGGCGGGCGTCTGCGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp ATTGAGGCGGGCTCTCTCCTCCAGGGTCTCCCCTCCTaGAATGCTAGGACTCACACTGGCCAGGGACTCCAT +
Preference number: 6 (lower is better)
Translates to: IEAGSLLQGLPS*NARTHTGQGLH
Trigger: ATGGAGTCCCTGGCCAGTGTGAGTCCTAGCATTGCAGGAGGGGAGACCCTGGAGGAGAGAGCCCGCCTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000612303.2
ENST00000642367.1
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS GCA 72 bp GAAGGCCAGCCCCAGCTGGTGTTACAAGACCCTCCGTaGCATGCAGCCTGCAGTGCAGAGGGTTGGGAACTT +
Preference number: 6 (lower is better)
Translates to: EGQPQLVLQDPP*HAACSAEGWEL
Trigger: AAGTTCCCAACCCTCTGCACTGCAGGCTGCATGGCACGGAGGGTCTTGTAACACCAGCTGGGGCTGGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp AGTCTGAGGACTACCAGGTGGGCTCCGAGCCAGGTCTaGAGGCCTCAGACCTCTCAAAGGGGTGGGGAATGT +
Preference number: 6 (lower is better)
Translates to: SLRTTRWAPSQV*RPQTSQRGGEC
Trigger: ACATTCCCCACCCCTTTGAGAGGTCTGAGGCCTGCAGACCTGGCTCGGAGCCCACCTGGTAGTCCTCAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp CAGCAAACTGAACACGAGGCACAGTCCTGCATGCTCTaGGACCGAGCACTGAGGGGGCCCACAGGTGAGAAG +
Preference number: 6 (lower is better)
Translates to: QQTEHEAQSCML*DRALRGPTGEK
Trigger: CTTCTCACCTGTGGGCCCCCTCAGTGCTCGGTCCCAGAGCATGCAGGACTGTGCCTCGTGTTCAGTTTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp GGAATGAGGCAACAACTGTCCACTGTTACCCTTTGCTaGGCACCCCACATGCCTGCTAGGCTCTCGCTGCCC +
Preference number: 6 (lower is better)
Translates to: GMRQQLSTVTLC*APHMPARLSLP
Trigger: GGGCAGCGAGAGCCTAGCAGGCATGTGGGGTGCCCAGCAAAGGGTAACAGTGGACAGTTGTTGCCTCATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp ACACACACACACACACACAGTCTGAGGACTACCAGGTaGGCTCCGAGCCAGGTCTGCAGGCCTCAGACCTCT +
Preference number: 6 (lower is better)
Translates to: THTHTHSLRTTR*APSQVCRPQTS
Trigger: AGAGGTCTGAGGCCTGCAGACCTGGCTCGGAGCCCACCTGGTAGTCCTCAGACTGTGTGTGTGTGTGTGTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp CCCCACCAGCCTTTCTCCTGTCACTTGACTCTAACCTaGAGTCCAAGTCACCAGGGCCCCAGGACCCAAAGG +
Preference number: 6 (lower is better)
Translates to: PHQPFSCHLTLT*SPSHQGPRTQR
Trigger: CCTTTGGGTCCTGGGGCCCTGGTGACTTGGACTCCAGGTTAGAGTCAAGTGACAGGAGAAAGGCTGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp TTTGCTGGGCACCCCACATGCCTGCTAGGCTCTCGCTaGCCACACGAAACCTTACATCTTCCTCGGATGGCA +
Preference number: 6 (lower is better)
Translates to: FAGHPTCLLGSR*PHETLHLPRMA
Trigger: TGCCATCCGAGGAAGATGTAAGGTTTCGTGTGGGCAGCGAGAGCCTAGCAGGCATGTGGGGTGCCCAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp GCAGGCATAAGCAGAGGACAAAGCCACAGTGTGACCTaGGTGCAGAGCACTGGGTTGGGCATCACCAGCAGA +
Preference number: 6 (lower is better)
Translates to: AGISRGQSHSVT*VQSTGLGITSR
Trigger: TCTGCTGGTGATGCCCAACCCAGTGCTCTGCACCCAGGTCACACTGTGGCTTTGTCCTCTGCTTATGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp CAGGCTGTGGACAGCAGGAATAGGCTGTTGAGGGGTTaGGCACAGGGTCAGGTGCTGGACACTAGAACAGGA +
Preference number: 6 (lower is better)
Translates to: QAVDSRNRLLRG*AQGQVLDTRTG
Trigger: TCCTGTTCTAGTGTCCAGCACCTGACCCTGTGCCCAACCCCTCAACAGCCTATTCCTGCTGTCCACAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 90 bp GGGGCCCATTCAGGAAACATCAGCCTGCCCTCAAGGTCTTCTGAATaGAACCCTGCCACTGTGACAACCACCCTCACAGGACAGGGCTCT +
Preference number: 6 (lower is better)
Translates to: GAHSGNISLPSRSSE*NPATVTTTLTGQGS
Trigger: AGAGCCCTGTCCTGTGAGGGTGGTTGTCACAGTGGCAGGGTTCAATTCAGAAGACCTTGAGGGCAGGCTGATGTTTCCTGAATGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp CCTGTCAAACATGCTAGGTGCCGCACCAGTCACCGGTaGGGATGGCGCCTTAACTCCACATCACTCCTCAGA +
Preference number: 6 (lower is better)
Translates to: PVKHARCRTSHR*GWRLNSTSLLR
Trigger: TCTGAGGAGTGATGTGGAGTTAAGGCGCCATCCTCACCGGTGACTGGTGCGGCACCTAGCATGTTTGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000501122.2
ENST00000601801.3
ENST00000645023.1
CDS TCA 72 bp ACACACACACACACACACACACACACACACACAGTCTaGGGACTACCAGGTGGGCTCCGAGCCAGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: THTHTHTHTHTV*GLPGGLRARSA
Trigger: TGCAGACCTGGCTCGGAGCCCACCTGGTAGTCCTCAGACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp ATCCTGCCCAAGGAGCATGAAGTCAGACCAGCAAACTaGACACGAGGCACAGTCCTGCATGCTCTGGGACCG +
Preference number: 6 (lower is better)
Translates to: ILPKEHEVRPAN*TRGTVLHALGP
Trigger: CGGTCCCAGAGCATGCAGGACTGTGCCTCGTGTTCAGTTTGCTGGTCTGACTTCATGCTCCTTGGGCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp TGTGGAATGAGGCAACAACTGTCCACTGTTACCCTTTaGTGGGCACCCCACATGCCTGCTAGGCTCTCGCTG +
Preference number: 6 (lower is better)
Translates to: CGMRQQLSTVTL*WAPHMPARLSL
Trigger: CAGCGAGAGCCTAGCAGGCATGTGGGGTGCCCAGCAAAGGGTAACAGTGGACAGTTGTTGCCTCATTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp CAGGCTCCAGCCATTTCCTTCATAGCCTGGCAGCTTTaGTCCTGCCTTCGCAGACAGGAATGCTGTCCTTCC +
Preference number: 6 (lower is better)
Translates to: QAPAISFIAWQL*SCLRRQECCPS
Trigger: GGAAGGACAGCATTCCTGTCTGCGAAGGCAGGAGCAAAGCTGCCAGGCTATGAAGGAAATGGCTGGAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp AGCTGGACACCCACTCTGGAGGGCAACAGGGCAGAATaGAGAAAAATGTCGGACTCACGCCCTATGACCCAG +
Preference number: 6 (lower is better)
Translates to: SWTPTLEGNRAE*RKMSDSRPMTQ
Trigger: CTGGGTCATAGGGCGTGAGTCCGACATTTTTCTCCATTCTGCCCTGTTGCCCTCCAGAGTGGGTGTCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp AGCACTGCCACCTGGAAAATAAAGCGTTGGTCAATGTaGTCCCCAACACCCGAGCAGCGTGCCTCGCAGTCC +
Preference number: 6 (lower is better)
Translates to: STATWKIKRWSM*SPTPEQRASQS
Trigger: GGACTGCGAGGCACGCTGCTCGGGTGTTGGGGACAACATTGACCAACGCTTTATTTTCCAGGTGGCAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000501122.2
ENST00000601801.3
ENST00000642367.1
ENST00000645023.1
CDS CAA 72 bp CACGTGATCCTGCTCACACCTTTGCACAGCCTCTGCTaGCTTACTGTAGCACGCACACAGGGAAGCCCAGAC +
Preference number: 6 (lower is better)
Translates to: HVILLTPLHSLC*LTVARTQGSPD
Trigger: GTCTGGGCTTCCCTGTGTGCGTGCTACAGTAAGCAAGCAGAGGCTGTGCAAAGGTGTGAGCAGGATCACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp GCCCTTATCTCCCCTTCTCAGGCAAACAGGCCCAGGTaGGTAGAACAAGCCTCCCTTGCTGCTCCCTTTGAA +
Preference number: 6 (lower is better)
Translates to: ALISPSQANRPR*VEQASLAAPFE
Trigger: TTCAAAGGGAGCAGCAAGGGAGGCTTGTTCTACTCACCTGGGCCTGTTTGCCTGAGAAGGGGAGATAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp TTCTGCACACAGCAGTGCCCCATCTTGGAGATGCCATaGGCACAGACAGAAGGTTTACTAGGTGGGCGGCAC +
Preference number: 6 (lower is better)
Translates to: FCTQQCPILEMP*AQTEGLLGGRH
Trigger: GTGCCGCCCACCTAGTAAACCTTCTGTCTGTGCTCATGGCATCTCCAAGATGGGGCACTGCTGTGTGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp GTGTCACCAACCAGATGTGCCAAGAGCCAGAGCAGGTaGAGACACCTACAGATGCTGCCTCCTCTGGACACT +
Preference number: 6 (lower is better)
Translates to: VSPTRCAKSQSR*RHLQMLPPLDT
Trigger: AGTGTCCAGAGGAGGCAGCATCTGTAGGTGTCTTCACCTGCTCTGGCTCTTGGCACATCTGGTTGGTGACAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp CTGTGTACAATGTTCTGCTCCCTGTGCCCCTATGAGTaGCCCTATGAGGTAAGAGCCAGAGCCGGGCTCACA +
Preference number: 6 (lower is better)
Translates to: LCTMFCSLCPYE*PYEVRARAGLT
Trigger: TGTGAGCCCGGCTCTGGCTCTTACCTCATAGGGTCACTCATAGGGGCACAGGGAGCAGAACATTGTACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp ACCGTGTTATACTCGATTCCGGTATGGACAGGCAGCTaGAGCCACTACGCAGTTTTACCCCAGTTCCACGGC +
Preference number: 6 (lower is better)
Translates to: TVLYSIPVWTGS*SHYAVLPQFHG
Trigger: GCCGTGGAACTGGGGTAAAACTGCGTAGTGGCTGCAGCTGCCTGTCCATACCGGAATCGAGTATAACACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp CCAGCCATTTCCTTCATAGCCTGGCAGCTTTGCTCCTaGCTTCGCAGACAGGAATGCTGTCCTTCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: PAISFIAWQLCS*LRRQECCPSSF
Trigger: GAAGCTGGAAGGACAGCATTCCTGTCTGCGAAGGCAGGAGCAAAGCTGCCAGGCTATGAAGGAAATGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp GCTAAGCCAGGCACCGTGTTATACTCGATTCCGGTATaGACAGGCAGCTGCAGCCACTACGCAGTTTTACCC +
Preference number: 6 (lower is better)
Translates to: AKPGTVLYSIPV*TGSCSHYAVLP
Trigger: GGGTAAAACTGCGTAGTGGCTGCAGCTGCCTGTCCATACCGGAATCGAGTATAACACGGTGCCTGGCTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp TCCACTCCGACATTCCGGGTACACAGAACTTCCCAGTaGGAAGAGCTAGCCACACAGTGGCAGAAGCTTGGA +
Preference number: 6 (lower is better)
Translates to: STPTFRVHRTSQ*EELATQWQKLG
Trigger: TCCAAGCTTCTGCCACTGTGTGGCTAGCTCTTCCCACTGGGAAGTTCTGTGTACCCGGAATGTCGGAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp AGGTTGAGCGGGGGAGGATCACTTGAGTCCAGAAGTTaGAGACCAGTCCGGGCAACACAGAAAGACCCCACA +
Preference number: 6 (lower is better)
Translates to: RLSGGGSLESRS*RPVRATQKDPT
Trigger: TGTGGGGTCTTTCTGTGTTGCCCGGACTGGTCTCAAACTTCTGGACTCAAGTGATCCTCCCCCGCTCAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp TCAGGCTCCAGCCATTTCCTTCATAGCCTGGCAGCTTaGCTCCTGCCTTCGCAGACAGGAATGCTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: SGSSHFLHSLAA*LLPSQTGMLSF
Trigger: GAAGGACAGCATTCCTGTCTGCGAAGGCAGGAGCAAAGCTGCCAGGCTATGAAGGAAATGGCTGGAGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 90 bp TGCATGACTTCAGGCTCCAGCCATTTCCTTCATAGCCTGGCAGCTTaGCTCCTGCCTTCGCAGACAGGAATGCTGTCCTTCCAGCTTCTC +
Preference number: 6 (lower is better)
Translates to: CMTSGSSHFLHSLAA*LLPSQTGMLSFQLL
Trigger: GAGAAGCTGGAAGGACAGCATTCCTGTCTGCGAAGGCAGGAGCAAAGCTGCCAGGCTATGAAGGAAATGGCTGGAGCCTGAAGTCATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp CAGGTGAGTAGAACAAGCCTCCCTTGCTGCTCCCTTTaGAACAAGCACCTTCCTTCTCAGCACAGAGGCTGG +
Preference number: 6 (lower is better)
Translates to: QVSRTSLPCCSL*NKHLPSQHRGW
Trigger: CCAGCCTCTGTGCTGAGAAGGAAGGTGCTTGTTTCAAAGGGAGCAGCAAGGGAGGCTTGTTCTACTCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp CCCCAGCACTCCACCCGTTTGTCAGTAGTGTACACGTaGAGGGGTCACCAAGATATAACGGCACAGGCAAAT +
Preference number: 6 (lower is better)
Translates to: PQHSTRLSVVYT*RGHQDITAQAN
Trigger: ATTTGCCTGTGCCGTTATATCTTGGTGACCCCTCCACGTGTACACTACTGACAAACGGGTGGAGTGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp CACAGAACTTCCCAGTGGGAAGAGCTAGCCACACAGTaGCAGAAGCTTGGAAAACAACCCATCCCAGCCCTA +
Preference number: 6 (lower is better)
Translates to: HRTSQWEELATQ*QKLGKQPIPAL
Trigger: TAGGGCTGGGATGGGTTGTTTTCCAAGCTTCTGCCACTGTGTGGCTAGCTCTTCCCACTGGGAAGTTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp ACAGCCTCGCTTCAACTTCAGCCTCCAAACACACTATaGTGCGGGCACTTACTTACTGCAGCAGCAGAGAGG +
Preference number: 6 (lower is better)
Translates to: TASLQLQPPNTL*CGHLLTAAAER
Trigger: CCTCTCTGCTGCTGCAGTAAGTAAGTGCCCGCACCATAGTGTGTTTGGAGGCTGAAGTTGAAGCGAGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp CTGGTAACACTGGTTACCCCTCTGGAGGGTGGGGGATaGGTAGTGCCAACGTTGTTGTCGTCACCTTTCAAC +
Preference number: 6 (lower is better)
Translates to: LVTLVTPLEGGG*VVPTLLSSPFN
Trigger: GTTGAAAGGTGACGACAACAACGTTGGCACTACCAATCCCCCACCCTCCAGAGGGGTAACCAGTGTTACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 90 bp TCCAGATTCCACGTGATCCTGCTCACACCTTTGCACAGCCTCTGCTaGCTTACTGTAGCACGCACACAGGGAAGCCCAGACGTTTTAGTC +
Preference number: 6 (lower is better)
Translates to: SRFHVILLTPLHSLC*LTVARTQGSPDVLV
Trigger: GACTAAAACGTCTGGGCTTCCCTGTGTGCGTGCTACAGTAAGCAAGCAGAGGCTGTGCAAAGGTGTGAGCAGGATCACGTGGAATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 90 bp AGCCAAGATGTATCCTCCAGATTCCACGTGATCCTGCTCACACCTTaGCACAGCCTCTGCTTGCTTACTGTAGCACGCACACAGGGAAGC +
Preference number: 6 (lower is better)
Translates to: SQDVSSRFHVILLTP*HSLCLLTVARTQGS
Trigger: GCTTCCCTGTGTGCGTGCTACAGTAAGCAAGCAGAGGCTGTGCAAAGGTGTGAGCAGGATCACGTGGAATCTGGAGGATACATCTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp CAACCACCTAAGTTGCTAAGGGGCAGCGAAGGATGCTaGTCTGCTGCGTATGCAAGTCTGACGCCCATCTTT +
Preference number: 6 (lower is better)
Translates to: QPPKLLRGSEGC*SAAYASLTPIF
Trigger: AAAGATGGGCGTCAGACTTGCATACGCAGCAGATCAGCATCCTTCGCTGCCCCTTAGCAACTTAGGTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS TCA 72 bp CCATTCAGGAAACATCAGCCTGCCCTCAAGGTCTTCTaGATTGAACCCTGCCACTGTGACAACCACCCTCAC +
Preference number: 6 (lower is better)
Translates to: PFRKHQPALKVF*IEPCHCDNHPH
Trigger: GTGAGGGTGGTTGTCACAGTGGCAGGGTTCAATTCAGAAGACCTTGAGGGCAGGCTGATGTTTCCTGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp TCCATGAAGCATTTTTGTAACTTTCAGCTGGATGGCTaGAGGCCCACCCAAGGGTGCACATTCACTCCCCAC +
Preference number: 6 (lower is better)
Translates to: SMKHFCNFQLDG*RPTQGCTFTPH
Trigger: GTGGGGAGTGAATGTGCACCCTTGGGTGGGCCTGCAGCCATCCAGCTGAAAGTTACAAAAATGCTTCATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS GCA 72 bp CTTTTTGTAACAACAGGCCGTTCCTGCGGTTCTCAGTaGTGCCAACCTGGGCATACTGAAGAGCCTCAACCA +
Preference number: 6 (lower is better)
Translates to: LFVTTGRSCGSQ*CQPGHTEEPQP
Trigger: TGGTTGAGGCTCTTCAGTATGCCCAGGTTGGCAGCACTGAGAACCGCAGGAACGGCCTGTTGTTACAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp GGTGTTACAAGACCCTCCGTGCCATGCAGCCTGCAGTaGAGAGGGTTGGGAACTTGTCTAGATATTTCCCAT +
Preference number: 6 (lower is better)
Translates to: GVTRPSVPCSLQ*RGLGTCLDISH
Trigger: ATGGGAAATATCTAGACAAGTTCCCAACCCTCTGCACTGCAGGCTGCATGGCACGGAGGGTCTTGTAACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp GCCTCGCTTCAACTTCAGCCTCCAAACACACTATGGTaGGGGCACTTACTTACTGCAGCAGCAGAGAGGAAA +
Preference number: 6 (lower is better)
Translates to: ASLQLQPPNTLW*GHLLTAAAERK
Trigger: TTTCCTCTCTGCTGCTGCAGTAAGTAAGTGCCCGCACCATAGTGTGTTTGGAGGCTGAAGTTGAAGCGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp CCACGCCTGTACAGCTTTACACATACACAGGTTCTCTaGAAAGAAACTGCAGCAACTGGCCATGACGGTGGC +
Preference number: 6 (lower is better)
Translates to: PRLYSFTHTQVL*KETAATGHDGG
Trigger: GCCACCGTCATGGCCAGTTGCTGCAGTTTCTTTCCAGAGAACCTGTGTATGTGTAAAGCTGTACAGGCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp GTATCCTCCAGATTCCACGTGATCCTGCTCACACCTTaGCACAGCCTCTGCTTGCTTACTGTAGCACGCACA +
Preference number: 6 (lower is better)
Translates to: VSSRFHVILLTP*HSLCLLTVART
Trigger: TGTGCGTGCTACAGTAAGCAAGCAGAGGCTGTGCAAAGGTGTGAGCAGGATCACGTGGAATCTGGAGGATAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp CACCAAGATATAACGGCACAGGCAAATAAGACACAGTaGCAAGGACGGCAACCAGCCCTGCAGCTCATGGGA +
Preference number: 6 (lower is better)
Translates to: HQDITAQANKTQ*QGRQPALQLMG
Trigger: TCCCATGAGCTGCAGGGCTGGTTGCCGTCCTTGCAACTGTGTCTTATTTGCCTGTGCCGTTATATCTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 90 bp TGGAGGGGTCACCAAGATATAACGGCACAGGCAAATAAGACACAGTaGCAAGGACGGCAACCAGCCCTGCAGCTCATGGGAAGGAAAGAA +
Preference number: 6 (lower is better)
Translates to: WRGHQDITAQANKTQ*QGRQPALQLMGRKE
Trigger: TTCTTTCCTTCCCATGAGCTGCAGGGCTGGTTGCCGTCCTTGCAACTGTGTCTTATTTGCCTGTGCCGTTATATCTTGGTGACCCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 90 bp GGTGTTACAAGACCCTCCGTGCCATGCAGCCTGCAGTGCAGAGGGTaGGGAACTTGTCTAGATATTTCCCATCATAAAGGGACAGGAAAC +
Preference number: 6 (lower is better)
Translates to: GVTRPSVPCSLQCRG*GTCLDISHHKGTGN
Trigger: GTTTCCTGTCCCTTTATGATGGGAAATATCTAGACAAGTTCCCAACCCTCTGCACTGCAGGCTGCATGGCACGGAGGGTCTTGTAACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp AGTTTGCAAGCCAAGATGTATCCTCCAGATTCCACGTaGTCCTGCTCACACCTTTGCACAGCCTCTGCTTGC +
Preference number: 6 (lower is better)
Translates to: SLQAKMYPPDST*SCSHLCTASAC
Trigger: GCAAGCAGAGGCTGTGCAAAGGTGTGAGCAGGATCACGTGGAATCTGGAGGATACATCTTGGCTTGCAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp TTTGTAACAACAGGCCGTTCCTGCGGTTCTCAGTGCTaGCAACCTGGGCATACTGAAGAGCCTCAACCAATA +
Preference number: 6 (lower is better)
Translates to: FVTTGRSCGSQC*QPGHTEEPQPI
Trigger: TATTGGTTGAGGCTCTTCAGTATGCCCAGGTTGGCAGCACTGAGAACCGCAGGAACGGCCTGTTGTTACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp AGGAAGCTGGTAAAGACATTTCCCCTGCCTGTGAGATaGCATCACACACCCCTCCCTTTGGTTCTCGGAAAA +
Preference number: 6 (lower is better)
Translates to: RKLVKTFPLPVR*HHTPLPLVLGK
Trigger: TTTTCCGAGAACCAAAGGGAGGGGTGTGTGATGCCATCTCACAGGCAGGGGAAATGTCTTTACCAGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS CCA 72 bp AACAAGCACCTTCCTTCTCAGCACAGAGGCTGGCAGTaGCTTCCATTCTACGCCCAAAGTTTGTCTCCTGTA +
Preference number: 6 (lower is better)
Translates to: NKHLPSQHRGWQ*LPFYAQSLSPV
Trigger: TACAGGAGACAAACTTTGGGCGTAGAATGGAAGCCACTGCCAGCCTCTGTGCTGAGAAGGAAGGTGCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp GCACATGGAGAGGTTAGCCCTGGCATTAAGGGTCCTTaGAATCTCTCAGCAGTCATAGTCAGTCAGATGCAC +
Preference number: 6 (lower is better)
Translates to: AHGEVSPGIKGP*NLSAVIVSQMH
Trigger: GTGCATCTGACTGACTATGACTGCTGAGAGATTCCAAGGACCCTTAATGCCAGGGCTAACCTCTCCATGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp AGCTCCAGTGCCCTATTAGGTCCAAATCCACTCAGATaGGGAAATGGAGAGTCAGGGACAAGCAACAACCAG +
Preference number: 6 (lower is better)
Translates to: SSSALLGPNPLR*GNGESGTSNNQ
Trigger: CTGGTTGTTGCTTGTCCCTGACTCTCCATTTCCCCATCTGAGTGGATTTGGACCTAATAGGGCACTGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp ATAACCAAGTTTAAGGGCACAGCCTGGGTGAAGGTGTaGGGAAATGTCAATGGGACCAACCTCCTTGAGGTG +
Preference number: 6 (lower is better)
Translates to: ITKFKGTAWVKV*GNVNGTNLLEV
Trigger: CACCTCAAGGAGGTTGGTCCCATTGACATTTCCCCACACCTTCACCCAGGCTGTGCCCTTAAACTTGGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp TCTAAGTCCCAACCTGCCGATGAAGCAACAAAGCTCTaGCCTTACAAGGCCTCAGAAATGGGGGCAGTCAAA +
Preference number: 6 (lower is better)
Translates to: SKSQPADEATKL*PYKASEMGAVK
Trigger: TTTGACTGCCCCCATTTCTGAGGCCTTGTAAGGCCAGAGCTTTGTTGCTTCATCGGCAGGTTGGGACTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp AGAGGCTGGCAGTGGCTTCCATTCTACGCCCAAAGTTaGTCTCCTGTAAGCAAAACCTTACACCCCAAGAGG +
Preference number: 6 (lower is better)
Translates to: RGWQWLPFYAQS*SPVSKTLHPKR
Trigger: CCTCTTGGGGTGTAAGGTTTTGCTTACAGGAGACAAACTTTGGGCGTAGAATGGAAGCCACTGCCAGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp ACAAGTGTTGGGGAGGATGTGGGAACCTCGGAACCCTaGTGCACTCTTGGTGAGAACGTAAAATGGTGCAGT +
Preference number: 6 (lower is better)
Translates to: TSVGEDVGTSEP*CTLGENVKWCS
Trigger: ACTGCACCATTTTACGTTCTCACCAAGAGTGCACAAGGGTTCCGAGGTTCCCACATCCTCCCCAACACTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp GAAGGTGTGGGGAAATGTCAATGGGACCAACCTCCTTaGGGTGGAAGCTGGGGGTGTCCATCATATTTAGAA +
Preference number: 6 (lower is better)
Translates to: EGVGKCQWDQPP*GGSWGCPSYLE
Trigger: TTCTAAATATGATGGACACCCCCAGCTTCCACCTCAAGGAGGTTGGTCCCATTGACATTTCCCCACACCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp TCAACAGAGAGCAGATCCCATCCCCACTCAGCAGTCTaGAGACCACTTGGGATAATACCAGTTCTATCTGTG +
Preference number: 6 (lower is better)
Translates to: STESRSHPHSAV*RPLGIIPVLSV
Trigger: CACAGATAGAACTGGTATTATCCCAAGTGGTCTGCAGACTGCTGAGTGGGGATGGGATCTGCTCTCTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp CAGTCGGCCTCACCTCTCTGCTCCTGTATCAACAAGTaGCATTTCATCCCCACTTCCAATCCCCAACATTTA +
Preference number: 6 (lower is better)
Translates to: QSASPLCSCINK*HFIPTSNPQHL
Trigger: TAAATGTTGGGGATTGGAAGTGGGGATGAAATGGCACTTGTTGATACAGGAGCAGAGAGGTGAGGCCGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp AAGGTAGAGATGTTCAGTCACCAGCAGACAAAGCAATaGTCACATCCAGAGGGAAAGCAGACTCGATCCGTC +
Preference number: 6 (lower is better)
Translates to: KVEMFSHQQTKQ*SHPEGKQTRSV
Trigger: GACGGATCGAGTCTGCTTTCCCTCTGGATGTGAGCATTGCTTTGTCTGCTGGTGACTGAACATCTCTACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp GGGCAGGCGCAGACAGCACTCCTTCCCAGACCAGGATaGCACTTAAGATTTCAACAAACTAAACAGACAAGT +
Preference number: 6 (lower is better)
Translates to: GQAQTALLPRPG*HLRFQQTKQTS
Trigger: ACTTGTCTGTTTAGTTTGTTGAAATCTTAAGTGGCATCCTGGTCTGGGAAGGAGTGCTGTCTGCGCCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp TATGTCTCTGCCTCCCCTGCTATCCTACCCAAAACCTaGCTGATGATGCCCTTAAGTCCAAGCAGAAGAAGT +
Preference number: 6 (lower is better)
Translates to: YVSASPAILPKT*LMMPLSPSRRS
Trigger: ACTTCTTCTGCTTGGACTTAAGGGCATCATCAGGCAGGTTTTGGGTAGGATAGCAGGGGAGGCAGAGACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp GAACAACAGATACTCTCATACTTAGGTATGCAAAGCTaGACACCCACTCTGGAGGGCAACAGGGCAGAATGG +
Preference number: 6 (lower is better)
Translates to: EQQILSYLGMQS*TPTLEGNRAEW
Trigger: CCATTCTGCCCTGTTGCCCTCCAGAGTGGGTGTCCAGCTTTGCATACCTAAGTATGAGAGTATCTGTTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp AGTAACTCAACAGTCCACAGTGCAAGACAGGCTGTGTaGTGTACCCACGCCTGTACAGCTTTACACATACAC +
Preference number: 6 (lower is better)
Translates to: SNSTVHSARQAV*CTHACTALHIH
Trigger: GTGTATGTGTAAAGCTGTACAGGCGTGGGTACACCACACAGCCTGTCTTGCACTGTGGACTGTTGAGTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp CTCAGCACAGACACTTCTCCAGGGAACATACACATATaGCCAACAGCACCAGCAAAGGTGCTTGATAGCATC +
Preference number: 6 (lower is better)
Translates to: LSTDTSPGNIHI*PTAPAKVLDSI
Trigger: GATGCTATCAAGCACCTTTGCTGGTGCTGTTGGCCATATGTGTATGTTCCCTGGAGAAGTGTCTGTGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp CACACACGCACACACACACACACCACAAATGGCCAATaGACACAAGGTAGAGATGTTCAGTCACCAGCAGAC +
Preference number: 6 (lower is better)
Translates to: HTRTHTHTTNGQ*TQGRDVQSPAD
Trigger: GTCTGCTGGTGACTGAACATCTCTACCTTGTGTCAATTGGCCATTTGTGGTGTGTGTGTGTGTGCGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 90 bp GGGAAGCGGAGAGACCCCAGGAGTGACGGTGAGAATGCAACTCACTaGTCATTACACAGGATATGGCAGATCGGATTTGACCAACAAAAT +
Preference number: 6 (lower is better)
Translates to: GKRRDPRSDGENATH*SLHRIWQIGFDQQN
Trigger: ATTTTGTTGGTCAAATCCGATCTGCCATATCCTGTGTAATGACAAGTGAGTTGCATTCTCACCGTCACTCCTGGGGTCTCTCCGCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp ACACACGCACACACACACACACCACAAATGGCCAATTaGCACAAGGTAGAGATGTTCAGTCACCAGCAGACA +
Preference number: 6 (lower is better)
Translates to: THAHTHTPQMAN*HKVEMFSHQQT
Trigger: TGTCTGCTGGTGACTGAACATCTCTACCTTGTGTCAATTGGCCATTTGTGGTGTGTGTGTGTGTGCGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp CAACTGCAAAGACCACTGAACTGGACACTGTCGGCGTaGCAGTATCAAGTAACCATTAGGCAGAGCAAAACG +
Preference number: 6 (lower is better)
Translates to: QLQRPLNWTLSA*QYQVTIRQSKT
Trigger: CGTTTTGCTCTGCCTAATGGTTACTTGATACTGTCACGCCGACAGTGTCCAGTTCAGTGGTCTTTGCAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp GGGGATGCCTTCACTCAGAGGAAGTTCACAGCCACCTaGCTTGGAACATGTACCTGTTCATCTTTTCGTAAT +
Preference number: 6 (lower is better)
Translates to: GDAFTQRKFTAT*LGTCTCSSFRN
Trigger: ATTACGAAAAGATGAACAGGTACATGTTCCAAGGCAGGTGGCTGTGAACTTCCTCTGAGTGAAGGCATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp ATCTGTGTAGGGGAAAGAATACCAGGAATTAGACTCTaGGGCCTGCAGGACCCACTACTGTTTTGTGCTAAG +
Preference number: 6 (lower is better)
Translates to: ICVGERIPGIRL*GLQDPLLFCAK
Trigger: CTTAGCACAAAACAGTAGTGGGTCCTGCAGGCCCCAGAGTCTAATTCCTGGTATTCTTTCCCCTACACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp TTGGGGAGGTTAAGTAACTTGCTCCCAGACATAAAGTaGCCAAGTAGTCCAGTCAGGATTCGAACCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LGRLSNLLPDIK*PSSPVRIRTSS
Trigger: GGAGCTGGTTCGAATCCTGACTGGACTACTTGGCAACTTTATGTCTGGGAGCAAGTTACTTAACCTCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp AGAGACCCCAGGAGTGACGGTGAGAATGCAACTCACTaGTCATTACACAGGATATGGCAGATCGGATTTGAC +
Preference number: 6 (lower is better)
Translates to: RDPRSDGENATH*SLHRIWQIGFD
Trigger: GTCAAATCCGATCTGCCATATCCTGTGTAATGACAAGTGAGTTGCATTCTCACCGTCACTCCTGGGGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 90 bp AGAAAAATGTCGGACTCACGCCCTATGACCCAGGAATTTCACTTCTaGGTACCTACCCTGAGAAACACTCATGCATTGTGCACAAGGGGT +
Preference number: 6 (lower is better)
Translates to: RKMSDSRPMTQEFHF*VPTLRNTHALCTRG
Trigger: ACCCCTTGTGCACAATGCATGAGTGTTTCTCAGGGTAGGTACCAAGAAGTGAAATTCCTGGGTCATAGGGCGTGAGTCCGACATTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 90 bp ATTTACCCGCATTTCACAGACACAGGCTTGGGGAGGTTAAGTAACTaGCTCCCAGACATAAAGTTGCCAAGTAGTCCAGTCAGGATTCGA +
Preference number: 6 (lower is better)
Translates to: IYPHFTDTGLGRLSN*LPDIKLPSSPVRIR
Trigger: TCGAATCCTGACTGGACTACTTGGCAACTTTATGTCTGGGAGCAAGTTACTTAACCTCCCCAAGCCTGTGTCTGTGAAATGCGGGTAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp TGCATAATTTTGGTCTCTTCAGGACAGTTGCTGCAATaGAGGCATAAGCAGAGGACAAAGCCACAGTGTGAC +
Preference number: 6 (lower is better)
Translates to: CIILVSSGQLLQ*RHKQRTKPQCD
Trigger: GTCACACTGTGGCTTTGTCCTCTGCTTATGCCTGCATTGCAGCAACTGTCCTGAAGAGACCAAAATTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp CCCCGTGAATCAATTCTTCTTCAGCATGCCAGTTGCTaGAGACAGCACCATTTACATACAGGCATCTATAGC +
Preference number: 6 (lower is better)
Translates to: PRESILLQHASC*RQHHLHTGIYS
Trigger: GCTATAGATGCCTGTATGTAAATGGTGCTGTCTCCAGCAACTGGCATGCTGAAGAAGAATTGATTCACGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp CATTTCACAGACACAGGCTTGGGGAGGTTAAGTAACTaGCTCCCAGACATAAAGTTGCCAAGTAGTCCAGTC +
Preference number: 6 (lower is better)
Translates to: HFTDTGLGRLSN*LPDIKLPSSPV
Trigger: GACTGGACTACTTGGCAACTTTATGTCTGGGAGCAAGTTACTTAACCTCCCCAAGCCTGTGTCTGTGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 90 bp CTCCAGGGAACATACACATATGGCCAACAGCACCAGCAAAGGTGCTaGATAGCATCACTCATCAGAGAAATGCAAATCCAAATGACACCA +
Preference number: 6 (lower is better)
Translates to: LQGTYTYGQQHQQRC*IASLIREMQIQMTP
Trigger: TGGTGTCATTTGGATTTGCATTTCTCTGATGAGTGATGCTATCAAGCACCTTTGCTGGTGCTGTTGGCCATATGTGTATGTTCCCTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp AGGCATCAGGTTTGCCTCACCAGTGAGAACACTAATTaGAAAAATCCCTCCCTGCTGGGCAGTTTAGCAATA +
Preference number: 6 (lower is better)
Translates to: RHQVCLTSENTN*KNPSLLGSLAI
Trigger: TATTGCTAAACTGCCCAGCAGGGAGGGATTTTTTCAATTAGTGTTCTCACTGGTGAGGCAAACCTGATGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp AGGAGAGTTCACTGTGAGAGCTCAACAAGGAGTAGCTaGTGCCAAACATCTACATTCATTTACCCGCATTTC +
Preference number: 6 (lower is better)
Translates to: RRVHCESSTRSS*CQTSTFIYPHF
Trigger: GAAATGCGGGTAAATGAATGTAGATGTTTGGCAGCAGCTACTCCTTGTTGAGCTCTCACAGTGAACTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp AATCCTCTTACCTCAGCAACTAGGACTACAGGCACATaGCACCACGCTTGGCCTTCTAATTTATTTCTGTGT +
Preference number: 6 (lower is better)
Translates to: NPLTSATRTTGT*HHAWPSNLFLC
Trigger: ACACAGAAATAAATTAGAAGGCCAAGCGTGGTGGCATGTGCCTGTAGTCCTAGTTGCTGAGGTAAGAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp GACAGGAAACAGCAGCTCCCCTTGCTCACAAGTACCTaGACGATACTATTCATTTCAGTTTCACACAAACCA +
Preference number: 6 (lower is better)
Translates to: DRKQQLPLLTST*TILFISVSHKP
Trigger: TGGTTTGTGTGAAACTGAAATGAATAGTATCGTGCAGGTACTTGTGAGCAAGGGGAGCTGCTGTTTCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp ACGGCACATGAGGAGAGGACCAACATTATTCTATTTTaGCAGCACGTGCTTTCAACCCATCTCACAAAACAG +
Preference number: 6 (lower is better)
Translates to: TAHEERTNIILF*QHVLSTHLTKQ
Trigger: CTGTTTTGTGAGATGGGTTGAAAGCACGTGCTGCCAAAATAGAATAATGTTGGTCCTCTCCTCATGTGCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp TGTGGGGAAATGTCAATGGGACCAACCTCCTTGAGGTaGAAGCTGGGGGTGTCCATCATATTTAGAAATTTA +
Preference number: 6 (lower is better)
Translates to: CGEMSMGPTSLR*KLGVSIIFRNL
Trigger: TAAATTTCTAAATATGATGGACACCCCCAGCTTCCACCTCAAGGAGGTTGGTCCCATTGACATTTCCCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 90 bp CGTTGTGGCATCAACGTTAAAATGTTCTACAGCTTAGGGATCTTCTaGAAGCAAGGTTCCAAGCACAAAACTAGTATGACCGGAGGCTCA +
Preference number: 6 (lower is better)
Translates to: RCGINVKMFYSLGIF*KQGSKHKTSMTGGS
Trigger: TGAGCCTCCGGTCATACTAGTTTTGTGCTTGGAACCTTGCTTCAAGAAGATCCCTAAGCTGTAGAACATTTTAACGTTGATGCCACAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000642367.1
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS TCA 72 bp GCCATGAGGAACACTATAGTAACAAACCACGGTCCATaGAGCATTTTTGTAACTTTCAGCTGGATGGCTGCA +
Preference number: 6 (lower is better)
Translates to: AMRNTIVTNHGP*SIFVTFSWMAA
Trigger: TGCAGCCATCCAGCTGAAAGTTACAAAAATGCTTCATGGACCGTGGTTTGTTACTATAGTGTTCCTCATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS GCA 72 bp AGAGTTCACTGTGAGAGCTCAACAAGGAGTAGCTGCTaGCAAACATCTACATTCATTTACCCGCATTTCACA +
Preference number: 6 (lower is better)
Translates to: RVHCESSTRSSC*QTSTFIYPHFT
Trigger: TGTGAAATGCGGGTAAATGAATGTAGATGTTTGGCAGCAGCTACTCCTTGTTGAGCTCTCACAGTGAACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp ATTTCACTTCTTGGTACCTACCCTGAGAAACACTCATaGATTGTGCACAAGGGGTTGTGTATGACGATGATC +
Preference number: 6 (lower is better)
Translates to: ISLLGTYPEKHS*IVHKGLCMTMI
Trigger: GATCATCGTCATACACAACCCCTTGTGCACAATGCATGAGTGTTTCTCAGGGTAGGTACCAAGAAGTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp GGGGTGTCTGCTGACATTCTACACAAAGAGACACACTaGAGTTGTGCTTCTCATCATTTCACATTAAGAACC +
Preference number: 6 (lower is better)
Translates to: GVSADILHKETH*SCASHHFTLRT
Trigger: GGTTCTTAATGTGAAATGATGAGAAGCACAACTCCAGTGTGTCTCTTTGTGTAGAATGTCAGCAGACACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp TCTACATTCATTTACCCGCATTTCACAGACACAGGCTaGGGGAGGTTAAGTAACTTGCTCCCAGACATAAAG +
Preference number: 6 (lower is better)
Translates to: STFIYPHFTDTG*GRLSNLLPDIK
Trigger: CTTTATGTCTGGGAGCAAGTTACTTAACCTCCCCAAGCCTGTGTCTGTGAAATGCGGGTAAATGAATGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp ACGCTCTCTGAATGTGACCTTGGGTGCAAGCTGGGTTaGTATGAACTTACTGGCATTTTTAACAAGACAGTG +
Preference number: 6 (lower is better)
Translates to: TLSECDLGCKLG*YELTGIFNKTV
Trigger: CACTGTCTTGTTAAAAATGCCAGTAAGTTCATACAAACCCAGCTTGCACCCAAGGTCACATTCAGAGAGCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp CATTGGCTTGAGTGGTTTCATCACATTTCAAACCAATaGTTACCAACTCTCAACAGAGAGCAGATCCCATCC +
Preference number: 6 (lower is better)
Translates to: HWLEWFHHISNQ*LPTLNREQIPS
Trigger: GGATGGGATCTGCTCTCTGTTGAGAGTTGGTAATCATTGGTTTGAAATGTGATGAAACCACTCAAGCCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp GCTACCACACAGATGTTGAAAAGACCAAGGCAGACATaGATACAGATATGCGGTGCTTACCTAGATGTACTA +
Preference number: 6 (lower is better)
Translates to: ATTQMLKRPRQT*IQICGAYLDVL
Trigger: TAGTACATCTAGGTAAGCACCGCATATCTGTATTCATGTCTGCCTTGGTCTTTTCAACATCTGTGTGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp GAATGGGTAATTCAAACACGGCTACCACACAGATGTTaGAAAGACCAAGGCAGACATGAATACAGATATGCG +
Preference number: 6 (lower is better)
Translates to: EWVIQTRLPHRC*KDQGRHEYRYA
Trigger: CGCATATCTGTATTCATGTCTGCCTTGGTCTTTTCAACATCTGTGTGGTAGCCGTGTTTGAATTACCCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp CCCCACAACTCCCACCTCAGGGTCCTCTTACTAGAATaGCAAGAAAGTATTATGAAATCTAACGAAGTAAAG +
Preference number: 6 (lower is better)
Translates to: PHNSHLRVLLLE*QESIMKSNEVK
Trigger: CTTTACTTCGTTAGATTTCATAATACTTTCTTGGCATTCTAGTAAGAGGACCCTGAGGTGGGAGTTGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000642367.1
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS GCA 72 bp GAACCCTTGTGCACTCTTGGTGAGAACGTAAAATGGTaGAGTTGCTATGAAAAACTACAGTGGTTCCTCAAT +
Preference number: 6 (lower is better)
Translates to: EPLCTLGENVKW*SCYEKLQWFLN
Trigger: ATTGAGGAACCACTGTAGTTTTTCATAGCAACTGCACCATTTTACGTTCTCACCAAGAGTGCACAAGGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp GAAAAGACCAAGGCAGACATGAATACAGATATGCGGTaGTTACCTAGATGTACTAGTAACTCAACAGTCCAC +
Preference number: 6 (lower is better)
Translates to: EKTKADMNTDMR*LPRCTSNSTVH
Trigger: GTGGACTGTTGAGTTACTAGTACATCTAGGTAAGCACCGCATATCTGTATTCATGTCTGCCTTGGTCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp CACCTGATCATAGCACAATTCAGAATTGCAAAGATATaGAACCAACCTACATGCCCATCAACTGATGAGTGG +
Preference number: 6 (lower is better)
Translates to: HLIIAQFRIAKI*NQPTCPSTDEW
Trigger: CCACTCATCAGTTGATGGGCATGTAGGTTGGTTCCATATCTTTGCAATTCTGAATTGTGCTATGATCAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp CTTCCATTCTTAAAAGTAGGCAAGCGTGATCATAAGTaGACCAGACACACAATGCGAGCCTCTAGAAAAAGA +
Preference number: 6 (lower is better)
Translates to: LPFLKVGKRDHK*TRHTMRASRKR
Trigger: TCTTTTTCTAGAGGCTCGCATTGTGTGTCTGGTTCACTTATGATCACGCTTGCCTACTTTTAAGAATGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp TTGCAAAGATGTGGAACCAACCCATCAACCAGTGAGTaGATAAATAAAATGTGGTATCTCTACACCATGGAA +
Preference number: 6 (lower is better)
Translates to: LQRCGTNPSTSE*INKMWYLYTME
Trigger: TTCCATGGTGTAGAGATACCACATTTTATTTATCCACTCACTGGTTGATGGGTTGGTTCCACATCTTTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp CCCAAAGGAAAAGAAGTCATTATACCAGAAAGACACTaGATGGCAGTACAAGTCACAATTGCAAAGATGTGG +
Preference number: 6 (lower is better)
Translates to: PKGKEVIIPERH*MAVQVTIAKMW
Trigger: CCACATCTTTGCAATTGTGACTTGTACTGCCATCAAGTGTCTTTCTGGTATAATGACTTCTTTTCCTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp CTTTTAATTTGCACAAGATCAGCCATGCCCACTCACTaGATTCTATTATATTACCCACACCTCTGGAAATTC +
Preference number: 6 (lower is better)
Translates to: LLICTRSAMPTH*ILLYYPHLWKF
Trigger: GAATTTCCAGAGGTGTGGGTAATATAATAGAATTCAGTGAGTGGGCATGGCTGATCTTGTGCAAATTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp TACCCTGTATGCCCATTGAAACAAGATTGTTTAAATTaGTACAGCCATGCAAGGGAACATCCTGTCATCATT +
Preference number: 6 (lower is better)
Translates to: YPVCPLKQDCLN*YSHAREHPVII
Trigger: AATGATGACAGGATGTTCCCTTGCATGGCTGTATCAATTTAAACAATCTTGTTTCAATGGGCATACAGGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp GCAATTTTGGATGGAGCTGGAGGATATTATTCTAAGTaGAGCAACTCAGGAATGGAAAACCAAATACTGTGT +
Preference number: 6 (lower is better)
Translates to: AILDGAGGYYSK*SNSGMENQILC
Trigger: ACACAGTATTTGGTTTTCCATTCCTGAGTTGCTTCACTTAGAATAATATCCTCCAGCTCCATCCAAAATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp CTGAGAAAAAGCCTCTTCAAATGTGTTTGTGAACTCTaGCGGTACAGGGAAATACTACTGGAAACAAAATTA +
Preference number: 6 (lower is better)
Translates to: LRKSLFKCVCEL*RYREILLETKL
Trigger: TAATTTTGTTTCCAGTAGTATTTCCCTGTACCGGCAGAGTTCACAAACACATTTGAAGAGGCTTTTTCTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp GACAACATACAAATGACCAGTAAGCATATGAAAAGATaGTCAGCATCACTCCTCATTAGGGAAATGCAAATC +
Preference number: 6 (lower is better)
Translates to: DNIQMTSKHMKR*SASLLIREMQI
Trigger: GATTTGCATTTCCCTAATGAGGAGTGATGCTGAGCATCTTTTCATATGCTTACTGGTCATTTGTATGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp ACTAAAAAGACACCTGATCATAGCACAATTCAGAATTaGAAAGATATGGAACCAACCTACATGCCCATCAAC +
Preference number: 6 (lower is better)
Translates to: TKKTPDHSTIQN*KDMEPTYMPIN
Trigger: GTTGATGGGCATGTAGGTTGGTTCCATATCTTTGCAATTCTGAATTGTGCTATGATCAGGTGTCTTTTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp GAATCTACTGTACCAATTACAGTCTTAGTAGGTCACTaGATACATGATAGATCAAAGATGGCAACTAGCAGA +
Preference number: 6 (lower is better)
Translates to: ESTVPITVLVGH*IHDRSKMATSR
Trigger: TCTGCTAGTTGCCATCTTTGATCTATCATGTATGCAGTGACCTACTAAGACTGTAATTGGTACAGTAGATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp ATCAACGTTAAAATGTTCTACAGCTTAGGGATCTTCTaGAAGCAAGGTTCCAAGCACAAAACTAGTATGACC +
Preference number: 6 (lower is better)
Translates to: INVKMFYSLGIF*KQGSKHKTSMT
Trigger: GGTCATACTAGTTTTGTGCTTGGAACCTTGCTTCAAGAAGATCCCTAAGCTGTAGAACATTTTAACGTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000499732.3
ENST00000501122.2
ENST00000601801.3
ENST00000642367.1
ENST00000645023.1
ENST00000646243.1
ENST00000670617.1
CDS CAA 72 bp TGTGGTTACCATGCTCTCCTACATGGCCTTAATTACTaGGAGCTAGCAAATCTAGACCTAAATCTACAATAT +
Preference number: 6 (lower is better)
Translates to: CGYHALLHGLNY*ELANLDLNLQY
Trigger: ATATTGTAGATTTAGGTCTAGATTTGCTAGCTCCAAGTAATTAAGGCCATGTAGGAGAGCATGGTAACCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp ATACCCTGTATGCCCATTGAAACAAGATTGTTTAAATaGATACAGCCATGCAAGGGAACATCCTGTCATCAT +
Preference number: 6 (lower is better)
Translates to: IPCMPIETRLFK*IQPCKGTSCHH
Trigger: ATGATGACAGGATGTTCCCTTGCATGGCTGTATCAATTTAAACAATCTTGTTTCAATGGGCATACAGGGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 90 bp AGTTCTATCTGTGGTTACCATGCTCTCCTACATGGCCTTAATTACTaGGAGCTAGCAAATCTAGACCTAAATCTACAATATGAAGATACA +
Preference number: 6 (lower is better)
Translates to: SSICGYHALLHGLNY*ELANLDLNLQYEDT
Trigger: TGTATCTTCATATTGTAGATTTAGGTCTAGATTTGCTAGCTCCAAGTAATTAAGGCCATGTAGGAGAGCATGGTAACCACAGATAGAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS GCA 72 bp TTGTGCACTCTTGGTGAGAACGTAAAATGGTGCAGTTaGTATGAAAAACTACAGTGGTTCCTCAATAAATTA +
Preference number: 6 (lower is better)
Translates to: LCTLGENVKWCS*YEKLQWFLNKL
Trigger: TAATTTATTGAGGAACCACTGTAGTTTTTCATAGCAACTGCACCATTTTACGTTCTCACCAAGAGTGCACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CCA 72 bp ACCAACCCATCAACCAGTGAGTGGATAAATAAAATGTaGTATCTCTACACCATGGAATATGACTTAGCAATA +
Preference number: 6 (lower is better)
Translates to: TNPSTSEWINKM*YLYTMEYDLAI
Trigger: TATTGCTAAGTCATATTCCATGGTGTAGAGATACCACATTTTATTTATCCACTCACTGGTTGATGGGTTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp ATTCCTCCTGAGGAAACTTTTCTCTCACAGATATACTaGCCCATGTACATAAAAACCCATGTACACAGATAT +
Preference number: 6 (lower is better)
Translates to: IPPEETFLSQIY*PMYIKTHVHRY
Trigger: ATATCTGTGTACATGGGTTTTTATGTACATGGGCAAGTATATCTGTGAGAGAAAAGTTTCCTCAGGAGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp AGCATTAAGCCCATGAATGCTAAATTCACACACAGATaGCAAGAATCTACTGTACCAATTACAGTCTTAGTA +
Preference number: 6 (lower is better)
Translates to: SIKPMNAKFTHR*QESTVPITVLV
Trigger: TACTAAGACTGTAATTGGTACAGTAGATTCTTGTCATCTGTGTGTGAATTTAGCATTCATGGGCTTAATGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp ATGTTATTTAATGGGTACAGAGTTTGTTTTGCAAGATaGAAAAGTTCTGGAGATTGGTTGTACAACAATGGC +
Preference number: 6 (lower is better)
Translates to: MLFNGYRVCFAR*KSSGDWLYNNG
Trigger: GCCATTGTTGTACAACCAATCTCCAGAACTTTTTCATCTTGCAAAACAAACTCTGTACCCATTAAATAACAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS TCA 72 bp AGTTTGGCAGTTCCTCAAAAATATACAGTTACCATATaGCCCAGTAATTCTACTCCTAGGTATATAATGAGA +
Preference number: 6 (lower is better)
Translates to: SLAVPQKYTVTI*PSNSTPRYIMR
Trigger: TCTCATTATATACCTAGGAGTAGAATTACTGGGTCATATGGTAACTGTATATTTTTGAGGAACTGCCAAACT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000501122.2
CDS CAA 72 bp ACACTATTTTTATCCCCATTTCATTCACCCGGAAACTaGCTTCATGAATTTAAGAAATTTGGCCAAAGTCAT +
Preference number: 6 (lower is better)
Translates to: TLFLSPFHSPGN*LHEFKKFGQSH
Trigger: ATGACTTTGGCCAAATTTCTTAAATTCATGAAGCAAGTTTCCGGGTGAATGAAATGGGGATAAAAATAGTGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501122.2